Query 043888
Match_columns 372
No_of_seqs 260 out of 760
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 09:15:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043888.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043888hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 3.9E-96 8E-101 764.3 28.9 337 31-371 6-357 (598)
2 PLN02952 phosphoinositide phos 100.0 5.9E-95 1.3E-99 756.1 28.5 338 31-371 13-358 (599)
3 PLN02222 phosphoinositide phos 100.0 1.1E-93 2.4E-98 744.4 28.7 326 33-371 4-340 (581)
4 PLN02223 phosphoinositide phos 100.0 4.8E-92 1E-96 724.1 27.1 300 42-372 2-309 (537)
5 KOG0169 Phosphoinositide-speci 100.0 1E-92 2.2E-97 742.6 21.8 315 32-369 184-505 (746)
6 PLN02228 Phosphoinositide phos 100.0 1E-89 2.2E-94 713.2 27.7 316 33-371 3-322 (567)
7 KOG1265 Phospholipase C [Lipid 100.0 9.6E-73 2.1E-77 594.7 19.2 243 36-288 206-466 (1189)
8 cd08633 PI-PLCc_eta2 Catalytic 100.0 1.2E-71 2.6E-76 529.3 15.3 153 141-294 1-155 (254)
9 cd08632 PI-PLCc_eta1 Catalytic 100.0 1.2E-71 2.6E-76 528.8 15.0 152 141-293 1-154 (253)
10 cd08629 PI-PLCc_delta1 Catalyt 100.0 4.7E-71 1E-75 526.6 15.5 152 141-293 1-153 (258)
11 cd08594 PI-PLCc_eta Catalytic 100.0 6.9E-71 1.5E-75 517.3 14.7 146 141-287 1-148 (227)
12 cd08630 PI-PLCc_delta3 Catalyt 100.0 8.6E-71 1.9E-75 525.3 15.1 149 141-290 1-151 (258)
13 cd08596 PI-PLCc_epsilon Cataly 100.0 6.7E-71 1.4E-75 524.9 14.3 150 142-292 2-156 (254)
14 cd08626 PI-PLCc_beta4 Catalyti 100.0 7.9E-71 1.7E-75 525.1 14.6 149 141-289 1-155 (257)
15 cd08595 PI-PLCc_zeta Catalytic 100.0 9.3E-71 2E-75 524.6 15.1 146 141-287 1-148 (257)
16 cd08631 PI-PLCc_delta4 Catalyt 100.0 9.7E-71 2.1E-75 524.7 15.1 148 141-289 1-150 (258)
17 cd08624 PI-PLCc_beta2 Catalyti 100.0 2.5E-70 5.5E-75 522.6 15.4 151 141-291 1-158 (261)
18 cd08591 PI-PLCc_beta Catalytic 100.0 3.6E-70 7.8E-75 520.6 14.9 150 141-290 1-156 (257)
19 cd08593 PI-PLCc_delta Catalyti 100.0 1E-69 2.3E-74 518.1 15.2 148 141-289 1-149 (257)
20 cd08623 PI-PLCc_beta1 Catalyti 100.0 6.9E-70 1.5E-74 518.9 14.0 151 141-291 1-158 (258)
21 cd08627 PI-PLCc_gamma1 Catalyt 100.0 2.1E-69 4.4E-74 507.6 15.2 148 142-290 2-150 (229)
22 cd08558 PI-PLCc_eukaryota Cata 100.0 2.7E-69 5.9E-74 506.9 15.1 146 141-287 1-147 (226)
23 cd08598 PI-PLC1c_yeast Catalyt 100.0 3.5E-69 7.6E-74 507.5 14.9 146 141-287 1-147 (231)
24 cd08625 PI-PLCc_beta3 Catalyti 100.0 6E-69 1.3E-73 513.2 14.6 152 141-292 1-159 (258)
25 cd08628 PI-PLCc_gamma2 Catalyt 100.0 1.9E-68 4E-73 508.3 14.5 147 141-288 1-148 (254)
26 cd08599 PI-PLCc_plant Catalyti 100.0 8.1E-68 1.8E-72 497.6 15.7 147 141-288 1-148 (228)
27 KOG1264 Phospholipase C [Lipid 100.0 6.7E-68 1.5E-72 554.5 15.1 216 70-290 236-457 (1267)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 4.1E-67 8.9E-72 492.8 15.3 147 141-288 1-148 (229)
29 cd08597 PI-PLCc_PRIP_metazoa C 100.0 7.8E-67 1.7E-71 499.0 14.9 152 141-293 1-153 (260)
30 cd00137 PI-PLCc Catalytic doma 100.0 3.4E-43 7.3E-48 337.9 13.0 148 141-290 1-155 (274)
31 smart00148 PLCXc Phospholipase 100.0 2.9E-41 6.2E-46 294.1 12.3 134 142-276 1-135 (135)
32 PF00388 PI-PLC-X: Phosphatidy 100.0 3.4E-38 7.4E-43 275.0 11.6 143 144-287 1-146 (146)
33 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 3.4E-27 7.3E-32 232.3 11.9 146 142-287 3-209 (324)
34 cd08590 PI-PLCc_Rv2075c_like C 99.8 5.4E-20 1.2E-24 177.3 11.1 144 141-286 3-169 (267)
35 cd08557 PI-PLCc_bacteria_like 99.7 7.9E-18 1.7E-22 157.7 9.6 146 143-289 4-160 (271)
36 PF09279 EF-hand_like: Phospho 99.5 3.6E-14 7.8E-19 112.9 5.2 80 57-141 1-83 (83)
37 cd08555 PI-PLCc_GDPD_SF Cataly 99.3 2.5E-11 5.3E-16 109.3 10.7 98 155-257 2-109 (179)
38 cd08588 PI-PLCc_At5g67130_like 99.1 4.4E-10 9.5E-15 108.9 9.1 138 143-284 7-154 (270)
39 cd08586 PI-PLCc_BcPLC_like Cat 99.0 1.1E-09 2.3E-14 106.5 8.3 139 145-288 7-150 (279)
40 cd08622 PI-PLCXDc_CG14945_like 98.0 6.1E-05 1.3E-09 73.4 11.0 135 145-284 6-158 (276)
41 cd08587 PI-PLCXDc_like Catalyt 97.9 8.3E-05 1.8E-09 72.1 11.5 139 145-287 6-174 (288)
42 cd08616 PI-PLCXD1c Catalytic d 97.7 0.00046 9.9E-09 67.8 11.7 139 145-288 7-177 (290)
43 cd08577 PI-PLCc_GDPD_SF_unchar 96.8 0.0045 9.7E-08 59.0 7.5 123 155-294 4-135 (228)
44 cd08619 PI-PLCXDc_plant Cataly 96.7 0.0086 1.9E-07 59.3 9.2 139 142-289 23-168 (285)
45 cd08562 GDPD_EcUgpQ_like Glyce 96.7 0.0063 1.4E-07 56.1 7.6 40 167-207 11-50 (229)
46 cd08556 GDPD Glycerophosphodie 96.7 0.011 2.3E-07 52.2 8.7 51 166-222 10-60 (189)
47 PF03009 GDPD: Glycerophosphor 96.6 0.0034 7.3E-08 57.0 5.4 38 168-206 9-46 (256)
48 cd08582 GDPD_like_2 Glyceropho 96.6 0.014 2.9E-07 54.5 9.1 40 167-207 11-50 (233)
49 cd08620 PI-PLCXDc_like_1 Catal 96.5 0.028 6E-07 55.4 11.3 140 145-287 6-163 (281)
50 cd08579 GDPD_memb_like Glycero 96.4 0.022 4.8E-07 52.6 9.6 40 167-207 11-50 (220)
51 cd08563 GDPD_TtGDE_like Glycer 96.2 0.037 8.1E-07 51.5 9.6 40 167-207 13-52 (230)
52 cd08565 GDPD_pAtGDE_like Glyce 95.9 0.052 1.1E-06 51.3 9.4 39 168-207 12-50 (235)
53 cd08567 GDPD_SpGDE_like Glycer 95.8 0.041 8.9E-07 51.7 8.3 40 168-208 14-53 (263)
54 cd05029 S-100A6 S-100A6: S-100 95.7 0.048 1E-06 44.6 7.3 63 56-126 10-77 (88)
55 cd08566 GDPD_AtGDE_like Glycer 95.6 0.053 1.1E-06 51.3 8.2 38 169-207 15-52 (240)
56 cd08568 GDPD_TmGDE_like Glycer 95.3 0.1 2.3E-06 48.5 8.8 79 166-254 11-114 (226)
57 cd08564 GDPD_GsGDE_like Glycer 95.1 0.13 2.8E-06 49.2 9.2 39 167-206 18-56 (265)
58 cd08581 GDPD_like_1 Glyceropho 95.1 0.14 2.9E-06 48.3 9.2 39 168-207 12-50 (229)
59 PTZ00184 calmodulin; Provision 95.0 0.12 2.7E-06 43.2 7.8 99 13-126 47-146 (149)
60 cd08584 PI-PLCc_GDPD_SF_unchar 94.7 0.15 3.4E-06 47.8 8.2 70 171-254 8-77 (192)
61 PTZ00183 centrin; Provisional 94.6 0.19 4.1E-06 42.8 7.9 101 11-126 51-152 (158)
62 cd08575 GDPD_GDE4_like Glycero 94.2 0.076 1.6E-06 51.0 5.1 40 168-208 14-53 (264)
63 cd08561 GDPD_cytoplasmic_ScUgp 93.9 0.069 1.5E-06 50.4 4.3 41 167-208 11-51 (249)
64 cd08601 GDPD_SaGlpQ_like Glyce 93.8 0.079 1.7E-06 50.2 4.5 40 167-207 13-52 (256)
65 PTZ00268 glycosylphosphatidyli 93.7 1.2 2.6E-05 46.0 13.0 111 174-291 89-210 (380)
66 cd08574 GDPD_GDE_2_3_6 Glycero 93.7 0.079 1.7E-06 50.6 4.3 40 167-207 14-53 (252)
67 cd05026 S-100Z S-100Z: S-100Z 93.2 0.44 9.5E-06 39.0 7.4 64 56-126 10-79 (93)
68 cd08607 GDPD_GDE5 Glycerophosp 93.1 0.13 2.9E-06 49.5 4.9 48 160-208 12-59 (290)
69 cd05022 S-100A13 S-100A13: S-1 93.1 0.37 8.1E-06 39.7 6.7 63 56-126 8-73 (89)
70 cd08612 GDPD_GDE4 Glycerophosp 93.0 0.13 2.9E-06 50.3 4.7 39 168-207 40-78 (300)
71 PRK11143 glpQ glycerophosphodi 92.7 0.18 3.8E-06 51.1 5.2 41 166-207 38-78 (355)
72 cd08580 GDPD_Rv2277c_like Glyc 92.6 0.18 4E-06 49.0 5.1 41 166-207 12-52 (263)
73 cd08600 GDPD_EcGlpQ_like Glyce 92.6 0.16 3.4E-06 50.5 4.7 41 166-207 12-52 (318)
74 cd05030 calgranulins Calgranul 92.5 0.44 9.5E-06 38.6 6.4 63 56-126 8-77 (88)
75 cd08605 GDPD_GDE5_like_1_plant 92.5 0.19 4.2E-06 48.4 5.0 38 169-207 25-62 (282)
76 cd08573 GDPD_GDE1 Glycerophosp 92.3 0.17 3.8E-06 48.5 4.4 40 167-207 11-50 (258)
77 cd08571 GDPD_SHV3_plant Glycer 91.8 0.19 4.1E-06 49.6 4.2 39 168-207 14-52 (302)
78 PTZ00184 calmodulin; Provision 91.8 0.69 1.5E-05 38.6 7.0 102 10-126 8-110 (149)
79 cd08559 GDPD_periplasmic_GlpQ_ 91.8 0.19 4.2E-06 49.1 4.1 40 167-207 13-52 (296)
80 cd05023 S-100A11 S-100A11: S-1 91.7 0.78 1.7E-05 37.6 7.0 63 57-126 10-78 (89)
81 PF13833 EF-hand_8: EF-hand do 91.7 0.42 9.2E-06 34.5 4.9 49 70-126 3-51 (54)
82 cd08583 PI-PLCc_GDPD_SF_unchar 91.6 0.25 5.3E-06 46.4 4.5 39 168-207 14-52 (237)
83 cd08570 GDPD_YPL206cp_fungi Gl 91.4 0.32 6.9E-06 45.5 5.0 40 167-207 11-50 (234)
84 cd05024 S-100A10 S-100A10: A s 91.3 1.1 2.4E-05 37.5 7.5 63 57-126 9-74 (91)
85 KOG0027 Calmodulin and related 91.2 0.91 2E-05 39.8 7.4 102 11-126 42-147 (151)
86 cd08606 GDPD_YPL110cp_fungi Gl 91.2 0.24 5.1E-06 47.8 4.0 39 169-208 24-62 (286)
87 cd08609 GDPD_GDE3 Glycerophosp 91.1 0.27 5.8E-06 49.1 4.4 48 156-207 31-78 (315)
88 cd08602 GDPD_ScGlpQ1_like Glyc 90.9 0.28 6E-06 48.6 4.3 42 166-208 12-53 (309)
89 PRK09454 ugpQ cytoplasmic glyc 90.8 0.28 6.2E-06 46.5 4.1 40 167-207 20-59 (249)
90 cd05025 S-100A1 S-100A1: S-100 90.6 1.2 2.6E-05 35.9 7.0 64 56-126 9-78 (92)
91 cd08604 GDPD_SHV3_repeat_2 Gly 90.3 0.45 9.8E-06 46.9 5.2 41 166-207 12-52 (300)
92 PF13499 EF-hand_7: EF-hand do 90.3 0.27 5.9E-06 36.6 2.8 60 58-126 2-66 (66)
93 cd00051 EFh EF-hand, calcium b 89.5 2.3 4.9E-05 29.2 6.9 60 58-126 2-62 (63)
94 smart00027 EH Eps15 homology d 89.4 2 4.2E-05 34.9 7.4 60 56-126 10-70 (96)
95 cd08621 PI-PLCXDc_like_2 Catal 89.3 4.3 9.3E-05 40.3 11.1 92 145-237 6-113 (300)
96 cd08572 GDPD_GDE5_like Glycero 89.3 0.5 1.1E-05 46.3 4.5 41 166-207 19-59 (293)
97 cd05027 S-100B S-100B: S-100B 89.3 2.1 4.5E-05 35.0 7.5 64 56-126 8-77 (88)
98 cd08610 GDPD_GDE6 Glycerophosp 88.4 0.76 1.6E-05 46.0 5.2 41 166-207 34-74 (316)
99 PTZ00183 centrin; Provisional 88.0 2.9 6.3E-05 35.5 7.9 101 11-126 15-116 (158)
100 cd00213 S-100 S-100: S-100 dom 87.2 3.3 7.2E-05 32.8 7.3 64 56-126 8-77 (88)
101 cd05031 S-100A10_like S-100A10 86.9 3.1 6.6E-05 33.7 7.1 64 56-126 8-77 (94)
102 KOG4306 Glycosylphosphatidylin 86.2 4.6 9.9E-05 40.7 9.1 107 175-288 72-187 (306)
103 cd08585 GDPD_like_3 Glyceropho 85.9 0.83 1.8E-05 43.4 3.7 38 168-207 20-57 (237)
104 COG0584 UgpQ Glycerophosphoryl 85.2 1 2.2E-05 42.3 4.0 37 169-206 20-56 (257)
105 cd00052 EH Eps15 homology doma 84.8 5.5 0.00012 29.1 7.0 57 59-126 2-59 (67)
106 COG5126 FRQ1 Ca2+-binding prot 84.8 4.1 8.8E-05 37.4 7.5 98 13-126 56-154 (160)
107 PF09069 EF-hand_3: EF-hand; 84.7 2.1 4.5E-05 35.8 5.1 62 58-129 5-75 (90)
108 cd08578 GDPD_NUC-2_fungi Putat 84.7 1.4 3E-05 43.9 4.8 50 151-207 3-52 (300)
109 cd08560 GDPD_EcGlpQ_like_1 Gly 84.5 1.2 2.5E-05 45.4 4.3 38 167-205 29-66 (356)
110 cd08613 GDPD_GDE4_like_1 Glyce 84.5 1.1 2.4E-05 45.0 4.0 38 169-207 60-97 (309)
111 cd08608 GDPD_GDE2 Glycerophosp 84.3 1.2 2.7E-05 45.2 4.4 40 167-207 14-53 (351)
112 PF11422 IBP39: Initiator bind 83.8 3.2 7E-05 38.8 6.4 100 56-161 19-139 (181)
113 KOG2258 Glycerophosphoryl dies 83.3 1.7 3.6E-05 44.0 4.8 59 168-227 82-145 (341)
114 PF13499 EF-hand_7: EF-hand do 82.6 0.35 7.7E-06 36.0 -0.3 63 14-81 1-66 (66)
115 cd00051 EFh EF-hand, calcium b 82.5 1.4 3.1E-05 30.3 2.8 60 15-81 2-62 (63)
116 PF01023 S_100: S-100/ICaBP ty 81.6 1.9 4.1E-05 31.3 3.2 28 57-84 7-37 (44)
117 cd08603 GDPD_SHV3_repeat_1 Gly 73.5 4.3 9.3E-05 40.7 4.2 39 168-207 14-54 (299)
118 PF05517 p25-alpha: p25-alpha 70.9 9.3 0.0002 34.4 5.4 62 58-126 1-67 (154)
119 PF08726 EFhand_Ca_insen: Ca2+ 68.7 3.2 6.9E-05 33.1 1.7 33 53-85 3-35 (69)
120 PF00036 EF-hand_1: EF hand; 68.4 6.4 0.00014 25.9 2.8 27 57-83 1-28 (29)
121 PF13405 EF-hand_6: EF-hand do 66.7 6.6 0.00014 25.5 2.6 27 57-83 1-28 (31)
122 KOG0037 Ca2+-binding protein, 63.4 20 0.00044 34.7 6.3 78 32-126 108-186 (221)
123 cd02810 DHOD_DHPD_FMN Dihydroo 60.7 47 0.001 31.9 8.4 89 163-262 102-195 (289)
124 PRK07259 dihydroorotate dehydr 60.0 36 0.00077 33.2 7.5 78 164-254 96-180 (301)
125 PF09441 Abp2: ARS binding pro 60.0 53 0.0012 30.6 8.0 14 115-129 108-121 (175)
126 PF05386 TEP1_N: TEP1 N-termin 60.0 2.2 4.7E-05 28.9 -0.6 15 227-241 8-22 (30)
127 smart00054 EFh EF-hand, calciu 58.1 16 0.00035 20.9 3.1 27 57-83 1-28 (29)
128 COG5126 FRQ1 Ca2+-binding prot 57.9 49 0.0011 30.5 7.5 61 56-126 20-81 (160)
129 KOG0036 Predicted mitochondria 56.6 23 0.00051 37.4 5.8 99 8-126 45-144 (463)
130 KOG0034 Ca2+/calmodulin-depend 56.5 46 0.001 31.2 7.3 87 35-126 84-173 (187)
131 smart00027 EH Eps15 homology d 52.6 26 0.00056 28.3 4.4 66 12-86 9-75 (96)
132 PLN02964 phosphatidylserine de 52.1 15 0.00032 40.7 3.7 63 15-84 181-244 (644)
133 KOG0027 Calmodulin and related 50.9 70 0.0015 27.8 7.2 62 56-126 8-70 (151)
134 PLN02591 tryptophan synthase 47.9 15 0.00032 35.8 2.7 87 174-263 20-113 (250)
135 PF13833 EF-hand_8: EF-hand do 46.0 22 0.00047 25.4 2.7 31 53-83 22-53 (54)
136 PTZ00452 actin; Provisional 42.2 31 0.00067 35.0 4.1 48 211-258 76-129 (375)
137 PTZ00466 actin-like protein; P 41.6 34 0.00073 34.9 4.2 46 213-258 85-135 (380)
138 cd00052 EH Eps15 homology doma 40.3 44 0.00096 24.1 3.7 55 21-83 6-61 (67)
139 KOG0031 Myosin regulatory ligh 39.5 1.1E+02 0.0024 28.5 6.7 95 12-126 67-163 (171)
140 cd05025 S-100A1 S-100A1: S-100 38.2 43 0.00093 26.8 3.5 72 6-82 2-79 (92)
141 cd00252 SPARC_EC SPARC_EC; ext 38.0 1.6E+02 0.0035 25.4 7.3 59 56-128 48-107 (116)
142 PF13202 EF-hand_5: EF hand; P 37.7 35 0.00077 21.5 2.4 24 58-81 1-25 (25)
143 cd00213 S-100 S-100: S-100 dom 37.4 48 0.001 26.0 3.7 72 9-83 4-79 (88)
144 KOG2643 Ca2+ binding protein, 37.3 56 0.0012 34.9 5.0 80 32-125 300-381 (489)
145 KOG0034 Ca2+/calmodulin-depend 37.1 1.1E+02 0.0023 28.8 6.5 60 55-126 29-93 (187)
146 PF00022 Actin: Actin; InterP 36.7 38 0.00082 33.7 3.7 45 214-258 73-123 (393)
147 PTZ00281 actin; Provisional 36.7 39 0.00085 34.2 3.8 47 212-258 78-130 (376)
148 cd00252 SPARC_EC SPARC_EC; ext 36.4 51 0.0011 28.5 3.9 60 11-81 46-106 (116)
149 CHL00200 trpA tryptophan synth 36.0 31 0.00068 33.7 2.9 87 174-263 33-126 (263)
150 cd08576 GDPD_like_SMaseD_PLD G 35.1 84 0.0018 31.2 5.7 52 171-224 9-68 (265)
151 COG0159 TrpA Tryptophan syntha 35.0 21 0.00045 35.4 1.4 90 175-264 36-130 (265)
152 PF01487 DHquinase_I: Type I 3 34.4 96 0.0021 28.8 5.8 58 180-255 21-87 (224)
153 PF07942 N2227: N2227-like pro 33.8 40 0.00087 33.4 3.2 64 144-227 166-237 (270)
154 KOG0044 Ca2+ sensor (EF-Hand s 33.8 63 0.0014 30.5 4.4 96 16-126 67-173 (193)
155 smart00268 ACTIN Actin. ACTIN 33.1 50 0.0011 32.8 3.8 45 214-258 74-124 (373)
156 PTZ00004 actin-2; Provisional 32.1 59 0.0013 32.8 4.2 46 214-259 80-131 (378)
157 PF05673 DUF815: Protein of un 31.6 1.2E+02 0.0025 30.0 6.0 85 155-262 51-137 (249)
158 PF14788 EF-hand_10: EF hand; 31.0 97 0.0021 23.5 4.2 46 72-126 2-47 (51)
159 PF10223 DUF2181: Uncharacteri 30.9 1.2E+02 0.0026 29.7 6.0 52 170-221 12-68 (244)
160 cd05030 calgranulins Calgranul 30.8 51 0.0011 26.5 2.9 74 6-82 1-78 (88)
161 PRK13111 trpA tryptophan synth 30.5 42 0.00091 32.7 2.7 87 175-263 31-124 (258)
162 cd04740 DHOD_1B_like Dihydroor 30.2 2.7E+02 0.0058 26.9 8.2 77 165-254 95-177 (296)
163 KOG0038 Ca2+-binding kinase in 30.0 68 0.0015 29.8 3.8 22 36-67 15-36 (189)
164 PF12738 PTCB-BRCT: twin BRCT 29.7 44 0.00095 24.7 2.2 29 155-187 32-60 (63)
165 PF09279 EF-hand_like: Phospho 29.0 29 0.00063 27.2 1.1 53 33-85 14-71 (83)
166 PF00977 His_biosynth: Histidi 28.7 1E+02 0.0022 29.2 4.9 69 183-260 123-194 (229)
167 KOG0751 Mitochondrial aspartat 28.4 1.5E+02 0.0032 32.6 6.4 67 52-125 29-99 (694)
168 cd05031 S-100A10_like S-100A10 27.5 73 0.0016 25.6 3.3 71 8-82 3-78 (94)
169 cd05023 S-100A11 S-100A11: S-1 26.2 98 0.0021 25.2 3.8 74 6-83 2-80 (89)
170 cd00012 ACTIN Actin; An ubiqui 26.0 75 0.0016 31.6 3.7 32 227-258 93-124 (371)
171 KOG0038 Ca2+-binding kinase in 25.7 1.1E+02 0.0024 28.4 4.4 100 12-126 73-175 (189)
172 TIGR00587 nfo apurinic endonuc 24.3 4.5E+02 0.0097 25.3 8.6 75 172-256 14-94 (274)
173 cd00466 DHQase_II Dehydroquina 23.9 59 0.0013 29.5 2.2 65 166-242 20-101 (140)
174 PRK05395 3-dehydroquinate dehy 23.8 52 0.0011 30.0 1.9 65 166-242 22-103 (146)
175 PF00290 Trp_syntA: Tryptophan 23.3 34 0.00073 33.6 0.6 95 168-264 19-123 (259)
176 PLN02952 phosphoinositide phos 23.3 2E+02 0.0042 31.9 6.4 49 70-126 15-63 (599)
177 PLN02964 phosphatidylserine de 23.1 2.7E+02 0.0058 31.1 7.5 62 58-129 181-243 (644)
178 KOG0041 Predicted Ca2+-binding 22.9 3E+02 0.0064 26.9 6.8 71 37-123 87-158 (244)
179 PRK03972 ribosomal biogenesis 22.7 3.8E+02 0.0081 25.9 7.5 114 168-289 34-162 (208)
180 cd05029 S-100A6 S-100A6: S-100 22.3 1.5E+02 0.0033 24.0 4.2 52 32-83 26-79 (88)
181 PF11790 Glyco_hydro_cc: Glyco 21.3 4.2E+02 0.0091 25.2 7.6 54 198-257 139-199 (239)
182 KOG0036 Predicted mitochondria 21.1 2.6E+02 0.0057 29.9 6.5 62 57-126 15-77 (463)
183 PF05517 p25-alpha: p25-alpha 21.1 66 0.0014 28.9 2.0 50 54-103 39-89 (154)
184 cd04724 Tryptophan_synthase_al 20.9 52 0.0011 31.4 1.4 83 173-263 17-111 (242)
185 PF15149 CATSPERB: Cation chan 20.7 1E+02 0.0022 33.5 3.5 58 207-264 364-448 (540)
186 KOG0040 Ca2+-binding actin-bun 20.6 1.5E+02 0.0033 36.5 5.2 74 15-93 2255-2334(2399)
187 COG1590 Uncharacterized conser 20.6 33 0.00072 33.0 -0.0 40 189-233 58-101 (208)
188 PTZ00280 Actin-related protein 20.3 1.1E+02 0.0025 31.1 3.8 46 214-259 81-132 (414)
189 PRK08136 glycosyl transferase 20.3 1E+02 0.0022 31.1 3.4 24 198-221 110-134 (317)
190 cd06430 GT8_like_2 GT8_like_2 20.3 2.2E+02 0.0047 28.8 5.6 57 172-228 204-280 (304)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=3.9e-96 Score=764.26 Aligned_cols=337 Identities=51% Similarity=0.837 Sum_probs=287.6
Q ss_pred CccccccccccccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHhhccccc
Q 043888 31 NDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQGET-GCTLSRAEEIVNNIISSRHHI 109 (372)
Q Consensus 31 ~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~-~~t~~~a~~Ii~~~~~~~~~~ 109 (372)
.||+| ++|+||.|+|+.+.++||+||+.||.+|++++++||+++|.+||+++|++. ..+.+.|++||+++++...++
T Consensus 6 ~m~~~--~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (598)
T PLN02230 6 EMGSY--KFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHI 83 (598)
T ss_pred CCccc--eEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhcccc
Confidence 37766 999999999999999999999999999998778999999999999999754 567899999999998654444
Q ss_pred ccccCCCCCHHHHHHhhhcCCCCCCccccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEE
Q 043888 110 TRFTRNGLNLDDFFHFLLFDDDINGPIKLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELD 189 (372)
Q Consensus 110 ~~~~~~~Ltld~F~~yL~~S~d~N~p~~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD 189 (372)
..+.+..|+++||++|| +|.+.|+|.+..|||||++|||||||+||||||||||||+|.||+++|++||++||||||||
T Consensus 84 ~~~~~~~~~~~~F~~yL-~s~~~~~~~~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD 162 (598)
T PLN02230 84 AKFTRRNLTLDDFNYYL-FSTDLNPPIADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELD 162 (598)
T ss_pred ccccccccCHHHHHHHH-cCcccCCcccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEe
Confidence 55566789999999999 99888989988999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 043888 190 IWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKLA 269 (372)
Q Consensus 190 ~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~ 269 (372)
||||++ ++|+|+||+|||++|+|++||+||++|||++|+||||||||+||+++||.+||+||+++|||+||.|+.+...
T Consensus 163 ~wdg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~ 241 (598)
T PLN02230 163 LWPRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQ 241 (598)
T ss_pred ccCCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccC
Confidence 999876 6799999999999999999999999999999999999999999999999999999999999999998877778
Q ss_pred CCCChhhhcCCeEeecCCCCcccccccccc------ccccccccccccCCCCCCCCCC-------CCCCCCCccc-CCCC
Q 043888 270 EFPSPESLKQRIIISTKPPKEYLEKDHVSA------STKLRDASFDDASTNSSDLEGY-------DSDQDLDDFE-ISDP 335 (372)
Q Consensus 270 ~lPSPe~Lk~KILIk~K~pke~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~ 335 (372)
.||||++||||||||+|+|+++++++...+ ...+++++||++++++.....+ ..+-+.++.. .+..
T Consensus 242 ~lpsP~~Lk~kilik~Kk~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 242 EFPSPEELKEKILISTKPPKEYLEANDAKEKDNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CCCChHHHcCCEEEEecCCcccccccccccccccccccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 999999999999999999999998764321 1345566788876554422110 0000000000 0011
Q ss_pred CCCCCCCCCcCCceeeEeecCCCCCchhcccccccC
Q 043888 336 KSGSGLRVAPEYKHLITIHAGKPKGTLKDGLKVAAD 371 (372)
Q Consensus 336 ~~~~~~~~~~~y~~li~i~a~k~kg~l~~~l~~~~~ 371 (372)
+.++.+..+|+|++||+|++|||+|++..+++.+|+
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~ 357 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPN 357 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCcc
Confidence 111345679999999999999999999999998875
No 2
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=5.9e-95 Score=756.08 Aligned_cols=338 Identities=67% Similarity=1.044 Sum_probs=281.6
Q ss_pred CccccccccccccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccc
Q 043888 31 NDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHIT 110 (372)
Q Consensus 31 ~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~ 110 (372)
+||+++|++|.||+|+|+.+.+++|+||..||.+|++++..||+++|.+||+++|++..++.++|++||+++.....+..
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 47999999999999999999999999999999999988889999999999999999988999999999998864433444
Q ss_pred cccCCCCCHHHHHHhhhcCCCCCCccccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEe
Q 043888 111 RFTRNGLNLDDFFHFLLFDDDINGPIKLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDI 190 (372)
Q Consensus 111 ~~~~~~Ltld~F~~yL~~S~d~N~p~~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~ 190 (372)
.+.+..|++++|++|| +|.+.|.|.+..|+|||++|||||||+|||||||+||||+|.||+++|++||++|||||||||
T Consensus 93 ~~~~~~l~~~~F~~~l-~s~~~~~p~~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 93 RYTRHGLNLDDFFHFL-LYDDLNGPITPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred cccccCcCHHHHHHHH-cCccccccccccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 4566789999999999 988899999889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 043888 191 WPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKLAE 270 (372)
Q Consensus 191 Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~ 270 (372)
|||+++++|+|+||+|||++|+|++||+||++|||++|+||||||||+||+++||.+||+||+++|||+||.|..+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999988776789
Q ss_pred CCChhhhcCCeEeecCCCCccccccccccc-cccccccccccCCCCCCCC-------CCCCCCCCCcccCCCCCCCCCCC
Q 043888 271 FPSPESLKQRIIISTKPPKEYLEKDHVSAS-TKLRDASFDDASTNSSDLE-------GYDSDQDLDDFEISDPKSGSGLR 342 (372)
Q Consensus 271 lPSPe~Lk~KILIk~K~pke~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 342 (372)
||||++||||||||+|+|+++++++..... ........+.+.++...+. ...+.++..+.++++.+ ....
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 329 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEETEEAQTLESMLFEQEADSRSDSDQDDNK--SGEL 329 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCcccccccccccccccccccccccccchhhh--cccc
Confidence 999999999999999999999987532100 0000000011100000000 00000000010111112 3445
Q ss_pred CCcCCceeeEeecCCCCCchhcccccccC
Q 043888 343 VAPEYKHLITIHAGKPKGTLKDGLKVAAD 371 (372)
Q Consensus 343 ~~~~y~~li~i~a~k~kg~l~~~l~~~~~ 371 (372)
.+|+|++||+||++||+|.+.+++++.++
T Consensus 330 ~~~~~~~l~~~~~~k~~~~~~~~~~~~~~ 358 (599)
T PLN02952 330 QKPAYKRLITIHAGKPKGTLKDAMKVAVD 358 (599)
T ss_pred cchhhhhheEEeccccccccchhhhcccc
Confidence 68999999999999999999999887654
No 3
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=1.1e-93 Score=744.41 Aligned_cols=326 Identities=52% Similarity=0.851 Sum_probs=278.3
Q ss_pred cccccccccccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccc
Q 043888 33 GSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRF 112 (372)
Q Consensus 33 ~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~ 112 (372)
++| ++|+||.|+|+.+...+|+||+.||.+|+++ +.|+.++|.+||+++|++..++.+.|++||++++.. .
T Consensus 4 ~~~--~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~------~ 74 (581)
T PLN02222 4 QTY--KVCFCFRRRFRYTASEAPREIKTIFEKYSEN-GVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL------L 74 (581)
T ss_pred cce--eEEEEeccccccccCCCcHHHHHHHHHhcCC-CCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh------h
Confidence 455 9999999999999999999999999999874 799999999999999999888999999999998521 2
Q ss_pred cCCCCCHHHHHHhhhcCCCCCCcc-ccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEee
Q 043888 113 TRNGLNLDDFFHFLLFDDDINGPI-KLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIW 191 (372)
Q Consensus 113 ~~~~Ltld~F~~yL~~S~d~N~p~-~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~W 191 (372)
.+.+|+++||++|| +| +.|.|+ +..|+|||++|||||||+|||||||+||||+|.||+++|++||++||||||||||
T Consensus 75 ~~~~~~~~gF~~yL-~s-~~n~~~~~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~w 152 (581)
T PLN02222 75 HRNGLHLDAFFKYL-FG-DNNPPLALHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIW 152 (581)
T ss_pred hccCcCHHHHHHHh-cC-CCCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEec
Confidence 34679999999999 87 457777 4579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCC
Q 043888 192 PNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES-NKLAE 270 (372)
Q Consensus 192 dg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~-~~~~~ 270 (372)
||+++++|+|+||+|||++|+|++||+||++|||++|+||||||||+||+++||.+||+||+++|||+||.|+. +....
T Consensus 153 dg~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~ 232 (581)
T PLN02222 153 PNSDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKE 232 (581)
T ss_pred cCCCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccC
Confidence 99987788999999999999999999999999999999999999999999999999999999999999999874 44689
Q ss_pred CCChhhhcCCeEeecCCCCcccccccccc----ccccccccccccCCCCCCCCC--C--CC-CCCCCcccCCCCCCCCCC
Q 043888 271 FPSPESLKQRIIISTKPPKEYLEKDHVSA----STKLRDASFDDASTNSSDLEG--Y--DS-DQDLDDFEISDPKSGSGL 341 (372)
Q Consensus 271 lPSPe~Lk~KILIk~K~pke~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~~~~~~~~~~~ 341 (372)
||||++||||||||+|+|+++++...... ...+++..||.+++++..... + +. +++++++++++.+ ...
T Consensus 233 lpsP~~Lk~kilik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 310 (581)
T PLN02222 233 FPSPNSLKKRIIISTKPPKEYKEGKDDEVVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGDDDDDDDDGEDK--SKK 310 (581)
T ss_pred CCChHHHCCCEEEEecCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc
Confidence 99999999999999999999998763211 122455678888776553221 1 11 1111111122222 345
Q ss_pred CCCcCCceeeEeecCCCCCchhcccccccC
Q 043888 342 RVAPEYKHLITIHAGKPKGTLKDGLKVAAD 371 (372)
Q Consensus 342 ~~~~~y~~li~i~a~k~kg~l~~~l~~~~~ 371 (372)
..+|+|++||+|++|||+|++..+++++|+
T Consensus 311 ~~~~~~~~li~~~~~~~~~~~~~~~~~~p~ 340 (581)
T PLN02222 311 NAPPQYKHLIAIHAGKPKGGITECLKVDPD 340 (581)
T ss_pred ccCHHhhhheeeecccccCccchhhhcCcc
Confidence 678999999999999999999999988775
No 4
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=4.8e-92 Score=724.09 Aligned_cols=300 Identities=36% Similarity=0.598 Sum_probs=265.6
Q ss_pred ccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHH---HHHhCCCCCCHHHHHHHHHHHhhcccccccccC-CCC
Q 043888 42 FFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFM---VEHQGETGCTLSRAEEIVNNIISSRHHITRFTR-NGL 117 (372)
Q Consensus 42 ~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL---~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~-~~L 117 (372)
.|+|+|+.+.++||++|+.+|.+|+++.+.|++++|++|| .++|||..++.++|++||+++.++++++..+.+ +.|
T Consensus 2 ~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l 81 (537)
T PLN02223 2 LLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCL 81 (537)
T ss_pred ccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhcccc
Confidence 5899999999999999999999999888999999999999 999999999999999999999876666666544 789
Q ss_pred CHHHHHHhhhcCCCCCCcccccc-ccCCCCCccccccccCCcccccCCCCCCC-CCHHHHHHHHhcCCcEEEEEeecCCC
Q 043888 118 NLDDFFHFLLFDDDINGPIKLEV-HNDMTAPLSNYFIYTGHNSYLTGNQLSSD-CSEVPIAKALQRGVRVIELDIWPNST 195 (372)
Q Consensus 118 tld~F~~yL~~S~d~N~p~~~~v-~qDMt~PLShYFIsSSHNTYLtG~QL~g~-SS~e~Yi~AL~~GCRcIELD~Wdg~~ 195 (372)
+++||++|| +|+++|+|.+..| ||||++|||||||+||||||||||||.|. ||+++|++||++||||||||||||+
T Consensus 82 ~~~~f~~~L-~s~~~n~~~~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~- 159 (537)
T PLN02223 82 ELDHLNEFL-FSTELNPPIGDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDG- 159 (537)
T ss_pred CHHHHHHHh-cCcccCCccccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCC-
Confidence 999999999 9999999887778 99999999999999999999999999999 9999999999999999999999875
Q ss_pred CCCceEeeCCcccccchHHHHHHHHhhcccccC-CCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCC
Q 043888 196 REDINVLHGRTLTTPVSLINCLKSIRDNAFVSS-PYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES-NKLAEFPS 273 (372)
Q Consensus 196 ~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S-~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~-~~~~~lPS 273 (372)
+++|+|+||||||++|+|++||+||++|||++| +||||||||||||++||++||+||++||||+||+|+. +....|||
T Consensus 160 ~~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~lPS 239 (537)
T PLN02223 160 KDGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPS 239 (537)
T ss_pred CCCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccCCC
Confidence 467899999999999999999999999999998 9999999999999999999999999999999999875 55789999
Q ss_pred hhhhcCCeEeecCCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCcCCceeeEe
Q 043888 274 PESLKQRIIISTKPPKEYLEKDHVSASTKLRDASFDDASTNSSDLEGYDSDQDLDDFEISDPKSGSGLRVAPEYKHLITI 353 (372)
Q Consensus 274 Pe~Lk~KILIk~K~pke~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~li~i 353 (372)
|++||||||||+|+|+++++++... +.. ..+ ++.+ . .....+|+|++||+|
T Consensus 240 P~~Lk~kIlik~K~~~~~~~~~~~~----------~~~---------~~~--~~~~--~------~~~~~~~~y~~li~~ 290 (537)
T PLN02223 240 PAELQNKILISRRPPKELLYAKADD----------GGV---------GVR--NELE--I------QEGPADKNYQSLVGF 290 (537)
T ss_pred hHHhCCCEEEEcCCCcccccccccc----------ccc---------ccc--cccc--c------cccccccceeeeeee
Confidence 9999999999999999998775210 000 000 0000 0 112457999999999
Q ss_pred ecCCCCCchhcccccccCC
Q 043888 354 HAGKPKGTLKDGLKVAADK 372 (372)
Q Consensus 354 ~a~k~kg~l~~~l~~~~~~ 372 (372)
|++||+|++.+++++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~ 309 (537)
T PLN02223 291 HAVEPRGMLQKALTGKADD 309 (537)
T ss_pred eccccccchhhhhccchhh
Confidence 9999999999998877653
No 5
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=1e-92 Score=742.55 Aligned_cols=315 Identities=38% Similarity=0.600 Sum_probs=270.2
Q ss_pred ccccccccccccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhccccccc
Q 043888 32 DGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITR 111 (372)
Q Consensus 32 ~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~ 111 (372)
++++ ++|.|++++|.......| ||+++|.+|+.+.++|+.++|.+||.++|++..++.+.|++||++|+...+ .
T Consensus 184 ~~~~--k~~~~~~~~~~~~~~~rp-ev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~---~ 257 (746)
T KOG0169|consen 184 SQTG--KLEEEEFVKFRKELTKRP-EVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE---F 257 (746)
T ss_pred hccc--eehHHHHHHHHHhhccCc-hHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh---c
Confidence 5666 999999999988766666 999999999998899999999999999999999999999999999985322 1
Q ss_pred ccCCCCCHHHHHHhhhcCCCCCC--ccccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEE
Q 043888 112 FTRNGLNLDDFFHFLLFDDDING--PIKLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELD 189 (372)
Q Consensus 112 ~~~~~Ltld~F~~yL~~S~d~N~--p~~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD 189 (372)
...+.|++|||++|| +|++.|. |.+..|||||++|||||||+||||||||||||.|.||++|||+||++||||||||
T Consensus 258 ~~~~~l~ldgF~~yL-~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD 336 (746)
T KOG0169|consen 258 RRHGLLSLDGFTRYL-FSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELD 336 (746)
T ss_pred cccceecHHHHHHHh-cCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEe
Confidence 123459999999999 9999887 8899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CC
Q 043888 190 IWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KL 268 (372)
Q Consensus 190 ~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~ 268 (372)
||||++ ++|+|+||||||++|.|++||+|||+|||++|+|||||||||||+++||++||+||++|||+|||.++.+ ..
T Consensus 337 ~Wdg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~ 415 (746)
T KOG0169|consen 337 CWDGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSL 415 (746)
T ss_pred cccCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcc
Confidence 999997 6899999999999999999999999999999999999999999999999999999999999999999876 58
Q ss_pred CCCCChhhhcCCeEeecCCCCccccccccccccccccccccccCCCCC--CCCCCCCC--CCCCcccCCCCCCCCCCCCC
Q 043888 269 AEFPSPESLKQRIIISTKPPKEYLEKDHVSASTKLRDASFDDASTNSS--DLEGYDSD--QDLDDFEISDPKSGSGLRVA 344 (372)
Q Consensus 269 ~~lPSPe~Lk~KILIk~K~pke~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 344 (372)
+.||||++||||||||+|||++++++... ++++.. +++.+.+. +++......+.+ .....+
T Consensus 416 ~~lPSPe~LK~KILik~Kk~~~~~~~~~~-------------~~~~~~~~d~~~~~e~s~e~~~~~~~~~~~--~~~~~~ 480 (746)
T KOG0169|consen 416 KELPSPEELKNKILIKGKKLKELLEADSK-------------EPSSFEVTDEDEDKESSTENDKSETDGQKK--SRKILA 480 (746)
T ss_pred ccCcCHHHHhcCEEEecCCCCcccccccc-------------cccccccccccccccccccccccccccccc--hhhhhh
Confidence 99999999999999999999999987421 111111 11111110 101000011112 233689
Q ss_pred cCCceeeEeecCCCCCchhcccccc
Q 043888 345 PEYKHLITIHAGKPKGTLKDGLKVA 369 (372)
Q Consensus 345 ~~y~~li~i~a~k~kg~l~~~l~~~ 369 (372)
|||++||+||+++|+|++..+++++
T Consensus 481 ~els~Lv~~~~~~~~~~~~~~~~~~ 505 (746)
T KOG0169|consen 481 PELSDLVAYHKSVPFGGFQLSLTVD 505 (746)
T ss_pred HHHHHHHHHhhccccCCceeccccC
Confidence 9999999999999999999999987
No 6
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1e-89 Score=713.16 Aligned_cols=316 Identities=43% Similarity=0.717 Sum_probs=266.7
Q ss_pred cccccccccccccccccCCCCCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccc
Q 043888 33 GSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRF 112 (372)
Q Consensus 33 ~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~ 112 (372)
++| ++|+||.|+|+.+..+||+||..||.+|+++ +.|+.++|.+||.++|++..++.+.|++||++|++... . .
T Consensus 3 ~~~--~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~--~-~ 76 (567)
T PLN02228 3 ESF--KVCFCCSRSFKEKTREPPVSIKRLFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNV--F-H 76 (567)
T ss_pred ccc--eEEEEeCCcCCcCCCCCcHHHHHHHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchh--h-c
Confidence 455 9999999999999999999999999999976 68999999999999999988889999999999984211 0 1
Q ss_pred cCCCCCHHHHHHhhhcCCCCCCcc--ccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEe
Q 043888 113 TRNGLNLDDFFHFLLFDDDINGPI--KLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDI 190 (372)
Q Consensus 113 ~~~~Ltld~F~~yL~~S~d~N~p~--~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~ 190 (372)
.++.|+++||++|| +|. .|.++ +..|+|||++|||||||+|||||||+|+||.|.||+++|++||++|||||||||
T Consensus 77 ~~~~~~~~gF~~yl-~s~-~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~ 154 (567)
T PLN02228 77 HHGLVHLNAFYRYL-FSD-TNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDL 154 (567)
T ss_pred ccCccCHHHHHHHh-cCc-ccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEe
Confidence 23569999999999 985 46655 567999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 043888 191 WPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKLAE 270 (372)
Q Consensus 191 Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~ 270 (372)
|||+++++|+|+||+|||++|+|++||+||++|||++|+||||||||+||+++||.+||++|+++|||+||.|+.+....
T Consensus 155 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~ 234 (567)
T PLN02228 155 WPNPSGNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKH 234 (567)
T ss_pred ccCCCCCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCC
Confidence 99988778999999999999999999999999999999999999999999999999999999999999999988777788
Q ss_pred CCChhhhcCCeEeecCCCCccccccccccc--cccccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCcCCc
Q 043888 271 FPSPESLKQRIIISTKPPKEYLEKDHVSAS--TKLRDASFDDASTNSSDLEGYDSDQDLDDFEISDPKSGSGLRVAPEYK 348 (372)
Q Consensus 271 lPSPe~Lk~KILIk~K~pke~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 348 (372)
||||++||||||||+|+++++++++...++ .++++.+|++. .+. .+. ..+ + .+ .....+++|+
T Consensus 235 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~-~~~--~--~~--~~~~~~~~ls 299 (567)
T PLN02228 235 FPSPEELKNKILISTKPPKEYLESKTVQTTRTPTVKETSWKRV-ADA-------ENK-ILE--E--YK--DEESEAVGYR 299 (567)
T ss_pred CCChHHHCCCEEEEecCCccccccccccccccccccccccccc-ccc-------hhh-ccc--c--cc--ccchhhhhhh
Confidence 999999999999999999988876533221 22222333321 000 000 000 0 00 0123579999
Q ss_pred eeeEeecCCCCCchhcccccccC
Q 043888 349 HLITIHAGKPKGTLKDGLKVAAD 371 (372)
Q Consensus 349 ~li~i~a~k~kg~l~~~l~~~~~ 371 (372)
+||+|++.+++|++++++..+|+
T Consensus 300 ~li~~~~~~~~~~~~~~~~~~p~ 322 (567)
T PLN02228 300 DLIAIHAANCKDPLKDCLSDDPE 322 (567)
T ss_pred hheeeeccccccCcchhhccCcc
Confidence 99999999999999988766654
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=9.6e-73 Score=594.68 Aligned_cols=243 Identities=31% Similarity=0.524 Sum_probs=214.8
Q ss_pred ccccccccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCC--------CCHHHHHHHHHHHhhcc
Q 043888 36 HYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETG--------CTLSRAEEIVNNIISSR 106 (372)
Q Consensus 36 ~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~--------~t~~~a~~Ii~~~~~~~ 106 (372)
.|..|.-|+.+ .++|+||..||.+++++. .+||.++|..||++.|++.. +....+..||++|++..
T Consensus 206 ~~e~f~~~l~k-----lcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~ 280 (1189)
T KOG1265|consen 206 TLEKFYRLLNK-----LCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNS 280 (1189)
T ss_pred cHHHHHHHHHh-----cCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCch
Confidence 33555555544 478899999999999876 89999999999999999975 45688999999998532
Q ss_pred cccccccCCCCCHHHHHHhhhcCCCCCCcc---ccccccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCC
Q 043888 107 HHITRFTRNGLNLDDFFHFLLFDDDINGPI---KLEVHNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGV 183 (372)
Q Consensus 107 ~~~~~~~~~~Ltld~F~~yL~~S~d~N~p~---~~~v~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GC 183 (372)
. ...++.|+.+||.+|| ++ +.|+++ ....++||++|||||||||||||||||+||.|.||+|+|.+||+.||
T Consensus 281 ~---~a~~gqms~dgf~ryl-~g-dEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGc 355 (1189)
T KOG1265|consen 281 D---NAEKGQMSTDGFVRYL-MG-DENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGC 355 (1189)
T ss_pred h---hhhccccchhhhHHHh-hC-CccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcC
Confidence 1 1256889999999999 74 668766 34579999999999999999999999999999999999999999999
Q ss_pred cEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCC
Q 043888 184 RVIELDIWPNSTR-EDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYF 262 (372)
Q Consensus 184 RcIELD~Wdg~~~-~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~ 262 (372)
||||||||||.+. ++|+|+||.|+|+.|.|+|||+||++.||.+|+||||||+|||||+.||+|||+++++||||||++
T Consensus 356 RCVELDcWdgk~~d~EPvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~ 435 (1189)
T KOG1265|consen 356 RCVELDCWDGKGEDEEPVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLT 435 (1189)
T ss_pred ceEEeeeecCCCCCCCceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999643 469999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC-----CCCCCCChhhhcCCeEeecCCC
Q 043888 263 PESN-----KLAEFPSPESLKQRIIISTKPP 288 (372)
Q Consensus 263 p~~~-----~~~~lPSPe~Lk~KILIk~K~p 288 (372)
.+.+ +...||||+.||+|||||+|++
T Consensus 436 ~PLe~~PL~pgv~lPsP~~Lr~KILIKnKKk 466 (1189)
T KOG1265|consen 436 EPLEDYPLEPGVPLPSPEDLRRKILIKNKKK 466 (1189)
T ss_pred CccccCCCCCCCCCCCHHHHhhhhhcccccc
Confidence 6532 2478999999999999999965
No 8
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.2e-71 Score=529.34 Aligned_cols=153 Identities=37% Similarity=0.613 Sum_probs=145.4
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
+|||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999986 578999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC--CCCCCCCChhhhcCCeEeecCCCCccccc
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES--NKLAEFPSPESLKQRIIISTKPPKEYLEK 294 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~--~~~~~lPSPe~Lk~KILIk~K~pke~l~~ 294 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+|+.|+. +....||||++||||||||+|++.+.|..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls~ 155 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALSD 155 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhhH
Confidence 999999999999999999999999999999999999999998763 34678999999999999999998877754
No 9
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.2e-71 Score=528.78 Aligned_cols=152 Identities=36% Similarity=0.615 Sum_probs=143.6
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC--CCCCCCCChhhhcCCeEeecCCCCcccc
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES--NKLAEFPSPESLKQRIIISTKPPKEYLE 293 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~--~~~~~lPSPe~Lk~KILIk~K~pke~l~ 293 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.|+. +....||||++||||||||+|++.+-|.
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~els 154 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDLS 154 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHHH
Confidence 999999999999999999999999999999999999999998753 3467899999999999999999865443
No 10
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=4.7e-71 Score=526.61 Aligned_cols=152 Identities=36% Similarity=0.602 Sum_probs=144.4
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||+|.||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhhcCCeEeecCCCCcccc
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES-NKLAEFPSPESLKQRIIISTKPPKEYLE 293 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~-~~~~~lPSPe~Lk~KILIk~K~pke~l~ 293 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.++. +....||||++||||||||+|+++..-+
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~ki~~e 153 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLKLVPE 153 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEeccccccHH
Confidence 999999999999999999999999999999999999999999763 4467999999999999999999975433
No 11
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=6.9e-71 Score=517.26 Aligned_cols=146 Identities=39% Similarity=0.659 Sum_probs=140.3
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhhcCCeEeecCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPE--SNKLAEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~--~~~~~~lPSPe~Lk~KILIk~K~ 287 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.|+ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~ 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc
Confidence 99999999999999999999999999999999999999999875 33468999999999999999997
No 12
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=8.6e-71 Score=525.35 Aligned_cols=149 Identities=36% Similarity=0.654 Sum_probs=142.9
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+||||.|.||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 578999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhhcCCeEeecCCCCc
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK--LAEFPSPESLKQRIIISTKPPKE 290 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~--~~~lPSPe~Lk~KILIk~K~pke 290 (372)
|+|||++|+||||||||+||+++||.+||+||+++|||+||.++.+. ...||||++||||||||+|+++.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~i 151 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQI 151 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCccc
Confidence 99999999999999999999999999999999999999999977543 57899999999999999999864
No 13
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=6.7e-71 Score=524.86 Aligned_cols=150 Identities=35% Similarity=0.602 Sum_probs=142.0
Q ss_pred cCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 043888 142 NDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIR 221 (372)
Q Consensus 142 qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk 221 (372)
|||++|||||||+|||||||+||||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||+
T Consensus 2 ~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I~ 80 (254)
T cd08596 2 EDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAIN 80 (254)
T ss_pred CccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999986 5799999999999999999999999
Q ss_pred hcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC---C--CCCCCCChhhhcCCeEeecCCCCccc
Q 043888 222 DNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES---N--KLAEFPSPESLKQRIIISTKPPKEYL 292 (372)
Q Consensus 222 ~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~---~--~~~~lPSPe~Lk~KILIk~K~pke~l 292 (372)
+|||++|+||||||||+||+++||.+||++|+++|||+||.++. + ....||||++||||||||+|+++|+-
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~els 156 (254)
T cd08596 81 RSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAPELS 156 (254)
T ss_pred HHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcHHHH
Confidence 99999999999999999999999999999999999999998752 2 25689999999999999999986653
No 14
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=7.9e-71 Score=525.09 Aligned_cols=149 Identities=36% Similarity=0.622 Sum_probs=141.2
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNS-TREDINVLHGRTLTTPVSLINCLKS 219 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~-~~~~p~V~HG~TlTs~i~f~~vl~a 219 (372)
||||++|||||||+|||||||+||||+|.||+++|++||++||||||||||||+ ++++|+|+||+|||++|+|++||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 3468999999999999999999999
Q ss_pred HhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhhcCCeEeecCCCC
Q 043888 220 IRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK-----LAEFPSPESLKQRIIISTKPPK 289 (372)
Q Consensus 220 Ik~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~-----~~~lPSPe~Lk~KILIk~K~pk 289 (372)
|++|||++|+||||||||+||+++||.+||++|+++|||+||.++.+. ...||||++||||||||+|+..
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls 155 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLS 155 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchh
Confidence 999999999999999999999999999999999999999999976432 4689999999999999999843
No 15
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=9.3e-71 Score=524.60 Aligned_cols=146 Identities=34% Similarity=0.607 Sum_probs=140.6
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
+|||++|||||||+|||||||+||||.|.||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhhcCCeEeecCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK--LAEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~--~~~lPSPe~Lk~KILIk~K~ 287 (372)
|+|||++|+||||||||+||+++||.+||+||+++|||+||.++.+. ...||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ 148 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKK 148 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecc
Confidence 99999999999999999999999999999999999999999976543 57999999999999999997
No 16
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=9.7e-71 Score=524.75 Aligned_cols=148 Identities=34% Similarity=0.612 Sum_probs=142.1
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+||||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC--CCCCCChhhhcCCeEeecCCCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK--LAEFPSPESLKQRIIISTKPPK 289 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~--~~~lPSPe~Lk~KILIk~K~pk 289 (372)
|+|||++|+||||||||+||+++||.+||++|+++|||+||+++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~ 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc
Confidence 99999999999999999999999999999999999999999987543 4799999999999999999873
No 17
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.5e-70 Score=522.61 Aligned_cols=151 Identities=41% Similarity=0.679 Sum_probs=142.6
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNST-REDINVLHGRTLTTPVSLINCLKS 219 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~-~~~p~V~HG~TlTs~i~f~~vl~a 219 (372)
||||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||++ .++|+|+||+|||++|+|++||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999962 468999999999999999999999
Q ss_pred HhhcccccCCCCeEEEeCCCC-CHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhhcCCeEeecCCCCcc
Q 043888 220 IRDNAFVSSPYPVIITLEDHL-TPDLQAKAAEMITQIFGKMLYFPESNK-----LAEFPSPESLKQRIIISTKPPKEY 291 (372)
Q Consensus 220 Ik~~AF~~S~YPVILSLE~Hc-s~~qQ~~mA~~l~~ifGd~L~~p~~~~-----~~~lPSPe~Lk~KILIk~K~pke~ 291 (372)
|++|||++|+||||||||+|| +++||++||++|+++|||+||.++.+. ...||||++||||||||+|+.+|+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~el 158 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEEM 158 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccccc
Confidence 999999999999999999999 799999999999999999999977532 378999999999999999987653
No 18
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=3.6e-70 Score=520.57 Aligned_cols=150 Identities=38% Similarity=0.636 Sum_probs=142.2
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTR-EDINVLHGRTLTTPVSLINCLKS 219 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~-~~p~V~HG~TlTs~i~f~~vl~a 219 (372)
||||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||+++ ++|+|+||+|||++|+|++||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC-----CCCCCChhhhcCCeEeecCCCCc
Q 043888 220 IRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK-----LAEFPSPESLKQRIIISTKPPKE 290 (372)
Q Consensus 220 Ik~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~-----~~~lPSPe~Lk~KILIk~K~pke 290 (372)
||+|||++|+||||||||+||+++||.+||+||+++|||+||.++.+. ...||||++||||||||+|+...
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~ 156 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSS 156 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchh
Confidence 999999999999999999999999999999999999999999987442 36899999999999999998443
No 19
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=1e-69 Score=518.06 Aligned_cols=148 Identities=39% Similarity=0.656 Sum_probs=141.8
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|||++|+|++||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 578999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhhcCCeEeecCCCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPESLKQRIIISTKPPK 289 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~Lk~KILIk~K~pk 289 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~ 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc
Confidence 9999999999999999999999999999999999999999997643 35789999999999999999884
No 20
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=6.9e-70 Score=518.88 Aligned_cols=151 Identities=36% Similarity=0.636 Sum_probs=141.7
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNST-REDINVLHGRTLTTPVSLINCLKS 219 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~-~~~p~V~HG~TlTs~i~f~~vl~a 219 (372)
.|||++|||||||+|||||||||+||.|.||+++|++||++||||||||||||++ .++|+|+||+|||++|+|++||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhcccccCCCCeEEEeCCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhhcCCeEeecCCCCcc
Q 043888 220 IRDNAFVSSPYPVIITLEDHL-TPDLQAKAAEMITQIFGKMLYFPESN-----KLAEFPSPESLKQRIIISTKPPKEY 291 (372)
Q Consensus 220 Ik~~AF~~S~YPVILSLE~Hc-s~~qQ~~mA~~l~~ifGd~L~~p~~~-----~~~~lPSPe~Lk~KILIk~K~pke~ 291 (372)
|++|||++|+||||||||+|| +++||.+||++|+++|||+||+++.+ ....||||++||||||||+|+..+.
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~L 158 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSNL 158 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhcc
Confidence 999999999999999999999 59999999999999999999997743 2468999999999999999986543
No 21
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=2.1e-69 Score=507.61 Aligned_cols=148 Identities=39% Similarity=0.668 Sum_probs=141.6
Q ss_pred cCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 043888 142 NDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIR 221 (372)
Q Consensus 142 qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk 221 (372)
+||++|||||||+|||||||+|+||+|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||+||+
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred hcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhhcCCeEeecCCCCc
Q 043888 222 DNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPESLKQRIIISTKPPKE 290 (372)
Q Consensus 222 ~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~Lk~KILIk~K~pke 290 (372)
+|||++|+||||||||+||+++||.+||++|+++|||+||+++.+ ....||||++||||||||+|+...
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~~ 150 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLYR 150 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEecccccc
Confidence 999999999999999999999999999999999999999997644 467899999999999999998643
No 22
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=2.7e-69 Score=506.89 Aligned_cols=146 Identities=43% Similarity=0.754 Sum_probs=141.4
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
+|||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999986 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCC-CCCCChhhhcCCeEeecCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKL-AEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~-~~lPSPe~Lk~KILIk~K~ 287 (372)
|+|||++|+||||||||+||+++||.+||++|+++|||+||+|+.+.. ..||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC
Confidence 999999999999999999999999999999999999999999886553 8999999999999999998
No 23
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=3.5e-69 Score=507.51 Aligned_cols=146 Identities=39% Similarity=0.703 Sum_probs=140.5
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
.|||++|||||||+|||||||+||||.|.||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999985 689999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhhcCCeEeecCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~Lk~KILIk~K~ 287 (372)
|+|||++|+||||||||+||+++||.+||++|+++||++||.++.+ ....||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~ 147 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKK 147 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEecc
Confidence 9999999999999999999999999999999999999999998754 357899999999999999997
No 24
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=6e-69 Score=513.24 Aligned_cols=152 Identities=37% Similarity=0.628 Sum_probs=142.5
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNS-TREDINVLHGRTLTTPVSLINCLKS 219 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~-~~~~p~V~HG~TlTs~i~f~~vl~a 219 (372)
.|||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||+ .+++|+|+||+|||++|+|++||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999996 3468999999999999999999999
Q ss_pred HhhcccccCCCCeEEEeCCCC-CHHHHHHHHHHHHHHhhcccCCCCCC-----CCCCCCChhhhcCCeEeecCCCCccc
Q 043888 220 IRDNAFVSSPYPVIITLEDHL-TPDLQAKAAEMITQIFGKMLYFPESN-----KLAEFPSPESLKQRIIISTKPPKEYL 292 (372)
Q Consensus 220 Ik~~AF~~S~YPVILSLE~Hc-s~~qQ~~mA~~l~~ifGd~L~~p~~~-----~~~~lPSPe~Lk~KILIk~K~pke~l 292 (372)
|++|||++|+||||||||||| +++||.+||++|++||||+|++++.+ ....||||++||+|||||+|++.+.+
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSdLv 159 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMSTLV 159 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccccc
Confidence 999999999999999999999 69999999999999999999997754 24689999999999999999875543
No 25
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.9e-68 Score=508.34 Aligned_cols=147 Identities=38% Similarity=0.668 Sum_probs=140.5
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
.|||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhhcCCeEeecCCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES-NKLAEFPSPESLKQRIIISTKPP 288 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~-~~~~~lPSPe~Lk~KILIk~K~p 288 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||+++. +....||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~ 148 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL 148 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc
Confidence 999999999999999999999999999999999999999998664 34689999999999999999975
No 26
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=8.1e-68 Score=497.61 Aligned_cols=147 Identities=63% Similarity=1.083 Sum_probs=141.9
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCC-CCCCChhhhcCCeEeecCCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKL-AEFPSPESLKQRIIISTKPP 288 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~-~~lPSPe~Lk~KILIk~K~p 288 (372)
++|||.+|+||||||||+||+++||++||++|+++|||+||.|+.+.. ..||||++||||||||+|+|
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~ 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC
Confidence 999999999999999999999999999999999999999999875543 79999999999999999998
No 27
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=6.7e-68 Score=554.47 Aligned_cols=216 Identities=34% Similarity=0.572 Sum_probs=189.6
Q ss_pred CCcCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhcccccccccCCCCCHHHHHHhhhcCCCCCCcc---ccccccC-C
Q 043888 70 LHMKPSEFRRFMVEHQGETGCTL-SRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFLLFDDDINGPI---KLEVHND-M 144 (372)
Q Consensus 70 ~~mt~~~l~~FL~~~Q~e~~~t~-~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL~~S~d~N~p~---~~~v~qD-M 144 (372)
.+++..+|++||..+|++.+++. ..++..+..|.+. .......+.|++++|..|| ||.+ |+.+ ...|.+| |
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D--~~re~~EPyl~v~EFv~fL-FSre-NslWd~k~d~V~~d~M 311 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD--TMRETAEPYLFVDEFVTFL-FSRE-NSLWDSKYDAVDMDDM 311 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh--hhhhccCcceeHHHHHHHH-hhcc-cccccccccccchhhh
Confidence 47999999999999999987654 3445555555432 1111245789999999999 9854 6554 3457666 9
Q ss_pred CCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhcc
Q 043888 145 TAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNA 224 (372)
Q Consensus 145 t~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~A 224 (372)
+.|||||||+||||||||||||+|+||.++|++||+.||||||||||||++ +.|+||||||+||+|.|.|||.+||+||
T Consensus 312 n~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd-~~pvIyHG~T~TtKIkf~DVlhtIkdhA 390 (1267)
T KOG1264|consen 312 NNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPD-GKPVIYHGHTRTTKIKFDDVLHTIKDHA 390 (1267)
T ss_pred cCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCC-CCceEEeccceeeeeehHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998 5789999999999999999999999999
Q ss_pred cccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhhcCCeEeecCCCCc
Q 043888 225 FVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPESLKQRIIISTKPPKE 290 (372)
Q Consensus 225 F~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~Lk~KILIk~K~pke 290 (372)
|++|+||||||||+|||.+||+.||+.++++|||+|++.|.+ +...||||.+||.|||||+|+..+
T Consensus 391 FvtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~ 457 (1267)
T KOG1264|consen 391 FVTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPP 457 (1267)
T ss_pred eeccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCc
Confidence 999999999999999999999999999999999999997754 478999999999999999997655
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=4.1e-67 Score=492.79 Aligned_cols=147 Identities=41% Similarity=0.705 Sum_probs=141.4
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
+|||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhhhcCCeEeecCCC
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPESLKQRIIISTKPP 288 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~Lk~KILIk~K~p 288 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~ 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC
Confidence 9999999999999999999999999999999999999999987644 4678999999999999999987
No 29
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=7.8e-67 Score=499.02 Aligned_cols=152 Identities=39% Similarity=0.626 Sum_probs=144.3
Q ss_pred ccCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSI 220 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aI 220 (372)
||||++|||||||+|||||||+|+||.|.||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|++||++|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 578999999999999999999999
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCC-CCCCCCCChhhhcCCeEeecCCCCcccc
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPES-NKLAEFPSPESLKQRIIISTKPPKEYLE 293 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~-~~~~~lPSPe~Lk~KILIk~K~pke~l~ 293 (372)
++|||++|+||||||||+||+++||.+||++|+++|||+||.|+. +....||||++||||||||+|+++....
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~~~~ 153 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKRRKL 153 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCcccc
Confidence 999999999999999999999999999999999999999999874 3467899999999999999999865443
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=3.4e-43 Score=337.93 Aligned_cols=148 Identities=28% Similarity=0.449 Sum_probs=140.4
Q ss_pred ccCCCCCccccccccCCcccccCCCCC-----CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQLS-----SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLIN 215 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL~-----g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~ 215 (372)
++||++|||||||.+||||||+|+|+. |.|+.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|++
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999875 578999999999 999999
Q ss_pred HHHHHhhcccccCCCCeEEEeCCCCCH--HHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhhcCCeEeecCCCCc
Q 043888 216 CLKSIRDNAFVSSPYPVIITLEDHLTP--DLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESLKQRIIISTKPPKE 290 (372)
Q Consensus 216 vl~aIk~~AF~~S~YPVILSLE~Hcs~--~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~Lk~KILIk~K~pke 290 (372)
||++|+++||..++|||||+||+||+. ++|++||++|.++||++|+.|+......+|||++|||||||+.|.+..
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~ 155 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGF 155 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCC
Confidence 999999999999999999999999998 999999999999999999998766667899999999999999997643
No 31
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.9e-41 Score=294.13 Aligned_cols=134 Identities=49% Similarity=0.828 Sum_probs=127.9
Q ss_pred cCCCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 043888 142 NDMTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIR 221 (372)
Q Consensus 142 qDMt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk 221 (372)
|||++|||||||.+|||||++|+|+.|.++..+|+++|++||||+|||||++++ ++|+|+||+|+++.++|++||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 4689999999999999999999999
Q ss_pred hcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC-CCCCCCChhh
Q 043888 222 DNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN-KLAEFPSPES 276 (372)
Q Consensus 222 ~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~-~~~~lPSPe~ 276 (372)
++||..+.|||||+||+||+.++|.+||++|+++||++||.|+.. ..+.+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998855 4678999975
No 32
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=3.4e-38 Score=275.04 Aligned_cols=143 Identities=31% Similarity=0.577 Sum_probs=128.8
Q ss_pred CCCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhc
Q 043888 144 MTAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDN 223 (372)
Q Consensus 144 Mt~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~ 223 (372)
|+.|+|||||++||||||+++|+.+.|....|.++|..||||++|+||.+++ +++.|+||++++++++|.+||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998775 368999999999999999999999999
Q ss_pred ccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhhcCCeEeecCC
Q 043888 224 AFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN---KLAEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 224 AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~---~~~~lPSPe~Lk~KILIk~K~ 287 (372)
+|..+.+||||++++||+.++|..+|++|.++||++|+.++.. ....+|+|++|||||||..|+
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999998754 468899999999999999874
No 33
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.94 E-value=3.4e-27 Score=232.33 Aligned_cols=146 Identities=27% Similarity=0.435 Sum_probs=132.9
Q ss_pred cCCCCCccccccccCCcccccC------------CCC--CCCCCHHHHHHHHhcCCcEEEEEeecCCC------------
Q 043888 142 NDMTAPLSNYFIYTGHNSYLTG------------NQL--SSDCSEVPIAKALQRGVRVIELDIWPNST------------ 195 (372)
Q Consensus 142 qDMt~PLShYFIsSSHNTYLtG------------~QL--~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~------------ 195 (372)
.+.+.||+||++.++||||.+| +|+ +.+++..+++.+|..|||.||||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 4578999999999999999998 787 66788889999999999999999997664
Q ss_pred -------CCCceEeeCCcc---cccchHHHHHHHHhhcccc-cCCCCeEEEeCCCCCH------------HHHHHHHHHH
Q 043888 196 -------REDINVLHGRTL---TTPVSLINCLKSIRDNAFV-SSPYPVIITLEDHLTP------------DLQAKAAEMI 252 (372)
Q Consensus 196 -------~~~p~V~HG~Tl---Ts~i~f~~vl~aIk~~AF~-~S~YPVILSLE~Hcs~------------~qQ~~mA~~l 252 (372)
+.+..|+|+.++ |+.++|.+||+.||..+|. .++|||+|.||.|.+. +.|.+++++|
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 467899999998 9999999999999999998 7999999999999987 8899999999
Q ss_pred HHHhhc-ccCCCCC-----CCC------CCCCChhhhcCCeEeecCC
Q 043888 253 TQIFGK-MLYFPES-----NKL------AEFPSPESLKQRIIISTKP 287 (372)
Q Consensus 253 ~~ifGd-~L~~p~~-----~~~------~~lPSPe~Lk~KILIk~K~ 287 (372)
+++||+ +||+|.. ..+ ..+|||++|||||||..++
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 223 6899999999999999997
No 34
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.82 E-value=5.4e-20 Score=177.26 Aligned_cols=144 Identities=26% Similarity=0.361 Sum_probs=121.3
Q ss_pred ccCCCCCccccccccCCcccccCCCC----------CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccc-
Q 043888 141 HNDMTAPLSNYFIYTGHNSYLTGNQL----------SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTT- 209 (372)
Q Consensus 141 ~qDMt~PLShYFIsSSHNTYLtG~QL----------~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs- 209 (372)
-.||+.||++|+|-++||||..+..- .+..-.-.+..+|..|||.+|||||..+ +++.|+||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 36999999999999999999986543 2234445789999999999999999765 4789999987654
Q ss_pred ------cchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCC----CCCCCChhhhc-
Q 043888 210 ------PVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNK----LAEFPSPESLK- 278 (372)
Q Consensus 210 ------~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~----~~~lPSPe~Lk- 278 (372)
...|.+||+.|+++.+....++|||.||+|++...+..+.++|.++||++||.|.... ....|+.++|+
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 4689999999999999999999999999999988788999999999999999986421 46789999995
Q ss_pred -CCeEeecC
Q 043888 279 -QRIIISTK 286 (372)
Q Consensus 279 -~KILIk~K 286 (372)
||.||-.-
T Consensus 161 ~GkrViv~~ 169 (267)
T cd08590 161 SGKQVVLAT 169 (267)
T ss_pred CCCEEEEEe
Confidence 77666544
No 35
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.73 E-value=7.9e-18 Score=157.69 Aligned_cols=146 Identities=23% Similarity=0.292 Sum_probs=127.3
Q ss_pred CCCCCccccccccCCcccccCCCC-------CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 043888 143 DMTAPLSNYFIYTGHNSYLTGNQL-------SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLIN 215 (372)
Q Consensus 143 DMt~PLShYFIsSSHNTYLtG~QL-------~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~ 215 (372)
+.+.||+++.|-.|||||..+... .+.+....+...|..|||+++||||...+.+++.|+||.......+|.+
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 578999999999999999887664 3345556788999999999999999876456899999988777899999
Q ss_pred HHHHHhhcccccCCCCeEEEeCCCCCHHH---HHHHHHHHHHHhhcccCCCCCCCCCCCCChhhhc-CCeEeecCCCC
Q 043888 216 CLKSIRDNAFVSSPYPVIITLEDHLTPDL---QAKAAEMITQIFGKMLYFPESNKLAEFPSPESLK-QRIIISTKPPK 289 (372)
Q Consensus 216 vl~aIk~~AF~~S~YPVILSLE~Hcs~~q---Q~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~Lk-~KILIk~K~pk 289 (372)
||+.|+.+.......+|||.||.+++... +..++++|.++||+.++.+. ......|++++|+ ||+||-.....
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~~~ 160 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYFGG 160 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEECCC
Confidence 99999999999989999999999998775 89999999999999999875 3346789999999 99999877654
No 36
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.48 E-value=3.6e-14 Score=112.89 Aligned_cols=80 Identities=33% Similarity=0.544 Sum_probs=65.7
Q ss_pred HHHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhhhcCCCCCCcc
Q 043888 57 DVKMAFMHFSQDGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFLLFDDDINGPI 136 (372)
Q Consensus 57 ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL~~S~d~N~p~ 136 (372)
||..||.+|++++..||+++|++||+++|++..++.+.|.+||++|++... ...+..||++||.+|| +|++ |.++
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~---~~~~~~lt~~gF~~fL-~S~~-N~~~ 75 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDER---NRQKGQLTLEGFTRFL-FSDE-NSIF 75 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHH---HHCTTEEEHHHHHHHH-HSTT-CBSS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchh---hcccCCcCHHHHHHHH-CCCc-CCCC
Confidence 799999999998899999999999999999988999999999999985321 1245789999999999 9865 5554
Q ss_pred ---ccccc
Q 043888 137 ---KLEVH 141 (372)
Q Consensus 137 ---~~~v~ 141 (372)
+..||
T Consensus 76 ~~~~~~Vy 83 (83)
T PF09279_consen 76 DPEHLQVY 83 (83)
T ss_dssp -HHHHSS-
T ss_pred ChHhCCcC
Confidence 44554
No 37
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.28 E-value=2.5e-11 Score=109.29 Aligned_cols=98 Identities=28% Similarity=0.407 Sum_probs=83.1
Q ss_pred cCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc------ccchHHHHHHHHhhcccccC
Q 043888 155 TGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT------TPVSLINCLKSIRDNAFVSS 228 (372)
Q Consensus 155 SSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT------s~i~f~~vl~aIk~~AF~~S 228 (372)
.+|+.|...-+ +.+..++..||..|||.||+|||...+ +.|+|.|+.++. ...+|.+||..++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888765444 788899999999999999999998765 578999999985 66899999999999999 88
Q ss_pred CCCeEEEeCCCCCH----HHHHHHHHHHHHHhh
Q 043888 229 PYPVIITLEDHLTP----DLQAKAAEMITQIFG 257 (372)
Q Consensus 229 ~YPVILSLE~Hcs~----~qQ~~mA~~l~~ifG 257 (372)
.+|++|.||.+++. .++.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999864 677778877776653
No 38
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=99.07 E-value=4.4e-10 Score=108.87 Aligned_cols=138 Identities=21% Similarity=0.310 Sum_probs=105.3
Q ss_pred CCCCCccccccccCCcccccCCCC--CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccc-cchHHHHHHH
Q 043888 143 DMTAPLSNYFIYTGHNSYLTGNQL--SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTT-PVSLINCLKS 219 (372)
Q Consensus 143 DMt~PLShYFIsSSHNTYLtG~QL--~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs-~i~f~~vl~a 219 (372)
--++||++|.+-.+||+|..+..- .+.+-...+...|..|+|.++||++... +++.++||.-... ..+|.++|+.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 467899999999999999887653 4455556788999999999999999754 4689999965443 7899999999
Q ss_pred HhhcccccCCCC-eEEEeCCCCCHHHHHHHHHHH-HHHhhcccCCCCCCC--CCCCCChhhhc--C-CeEee
Q 043888 220 IRDNAFVSSPYP-VIITLEDHLTPDLQAKAAEMI-TQIFGKMLYFPESNK--LAEFPSPESLK--Q-RIIIS 284 (372)
Q Consensus 220 Ik~~AF~~S~YP-VILSLE~Hcs~~qQ~~mA~~l-~~ifGd~L~~p~~~~--~~~lPSPe~Lk--~-KILIk 284 (372)
|+.+.=. .|.- |||.||++.+.... ..+.++ ...||+.+|.|.... ....|++++|. | ||||-
T Consensus 85 i~~fL~~-nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvvf 154 (270)
T cd08588 85 VVDFLDA-NPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLVF 154 (270)
T ss_pred HHHHHHh-CCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEEE
Confidence 9998643 4444 88899999876653 222233 258999999986543 46899999996 4 45553
No 39
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.99 E-value=1.1e-09 Score=106.51 Aligned_cols=139 Identities=19% Similarity=0.273 Sum_probs=109.1
Q ss_pred CCCccccccccCCcccccCCC--CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 043888 145 TAPLSNYFIYTGHNSYLTGNQ--LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRD 222 (372)
Q Consensus 145 t~PLShYFIsSSHNTYLtG~Q--L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~ 222 (372)
+.||++.-|-.+|||+-...- -.+.|....+..-|..|+|.+.|+|+... +++..++||..... .+|.+||+.|+.
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 789999999999998754332 45677788899999999999999999865 35788999976554 899999999999
Q ss_pred cccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCC---CCCCCCChhhhcCCeEeecCCC
Q 043888 223 NAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESN---KLAEFPSPESLKQRIIISTKPP 288 (372)
Q Consensus 223 ~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~---~~~~lPSPe~Lk~KILIk~K~p 288 (372)
+--..-.-.|||+|..+.+... -.+-+.++|.+.+..+... .....|+..++||||++-.+-.
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~rf~ 150 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRRFD 150 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEecC
Confidence 8887777889999999998753 2233455555555554422 2478999999999999987743
No 40
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.97 E-value=6.1e-05 Score=73.41 Aligned_cols=135 Identities=16% Similarity=0.258 Sum_probs=96.3
Q ss_pred CCCccccccccCCcccccCCCCC---------CCCCHHHHHHHHhcCCcEEEEEeecCC-CCCCceEeeCCcccccchHH
Q 043888 145 TAPLSNYFIYTGHNSYLTGNQLS---------SDCSEVPIAKALQRGVRVIELDIWPNS-TREDINVLHGRTLTTPVSLI 214 (372)
Q Consensus 145 t~PLShYFIsSSHNTYLtG~QL~---------g~SS~e~Yi~AL~~GCRcIELD~Wdg~-~~~~p~V~HG~TlTs~i~f~ 214 (372)
+.||++=+|-.||||.-.+-... +.+-...+..-|..|+|.+.|-|.-.+ ..++..++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 46899999999999764432221 223344577889999999999996433 2356788898542 38999
Q ss_pred HHHHHHhhcccccCCCCeEEEeCCCCC------HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhh--cCCeEee
Q 043888 215 NCLKSIRDNAFVSSPYPVIITLEDHLT------PDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESL--KQRIIIS 284 (372)
Q Consensus 215 ~vl~aIk~~AF~~S~YPVILSLE~Hcs------~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~L--k~KILIk 284 (372)
++|..|+++.=.. .=-|||.+ .|.. ++.-..+..+|.+.||+.|+.|.. ....-|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999886555 55677777 4443 577788899999999999997753 33456899997 5554444
No 41
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.95 E-value=8.3e-05 Score=72.09 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=96.8
Q ss_pred CCCccccccccCCcccccCCCCC---------------------CCCCHHHHHHHHhcCCcEEEEEeecCC-CCCCceEe
Q 043888 145 TAPLSNYFIYTGHNSYLTGNQLS---------------------SDCSEVPIAKALQRGVRVIELDIWPNS-TREDINVL 202 (372)
Q Consensus 145 t~PLShYFIsSSHNTYLtG~QL~---------------------g~SS~e~Yi~AL~~GCRcIELD~Wdg~-~~~~p~V~ 202 (372)
+.||.+..|-.|||+.--+-.-. +.+-...+..-|..|+|.+.|++.-.. ..++..++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 47999999999999654322111 122223466778899999999995433 23567889
Q ss_pred eCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCC-----CHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhh
Q 043888 203 HGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHL-----TPDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESL 277 (372)
Q Consensus 203 HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hc-----s~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~L 277 (372)
||--- -.+|.++|+.|+++.=....=-|||.++..- +.+.-.++..+|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 98322 2889999999998755444456888886532 34778888899999999999876 223456889999
Q ss_pred c--CC-eEeecCC
Q 043888 278 K--QR-IIISTKP 287 (372)
Q Consensus 278 k--~K-ILIk~K~ 287 (372)
. || |||-...
T Consensus 162 ~~~gk~viv~~~~ 174 (288)
T cd08587 162 WESGKRVIVFYDD 174 (288)
T ss_pred HhCCCeEEEEEcC
Confidence 7 66 4444443
No 42
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=97.67 E-value=0.00046 Score=67.75 Aligned_cols=139 Identities=26% Similarity=0.341 Sum_probs=92.6
Q ss_pred CCCccccccccCCcc--cccCC-C-CC-----------------------CCCCHHHHHHHHhcCCcEEEEEeecCCCCC
Q 043888 145 TAPLSNYFIYTGHNS--YLTGN-Q-LS-----------------------SDCSEVPIAKALQRGVRVIELDIWPNSTRE 197 (372)
Q Consensus 145 t~PLShYFIsSSHNT--YLtG~-Q-L~-----------------------g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~ 197 (372)
+.||.+..|--|||| |-... . ++ +.+=...+..-|..|+|.+.|.+--.++.+
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 369999999999995 43321 1 11 112223456678899999999996544345
Q ss_pred CceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCC--CCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChh
Q 043888 198 DINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDH--LTPDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPE 275 (372)
Q Consensus 198 ~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~H--cs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe 275 (372)
+..++||-. + .++.++|..|+++.=....=-|||.+... .+.+.-..+.++|.++||+.|+-+.. ...-|+.+
T Consensus 87 ~~~~~Hg~~--~-~~~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL~ 161 (290)
T cd08616 87 DLYFVHGLY--G-ILVKEILEEINDFLTEHPKEVVILDFNHFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTLE 161 (290)
T ss_pred cEEEEEecc--c-hhHHHHHHHHHHHHHHCCCcEEEEEEEccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcHH
Confidence 788999942 2 29999999999875444344577777532 23455567788999999999875422 23457899
Q ss_pred hhc---CCeEeecCCC
Q 043888 276 SLK---QRIIISTKPP 288 (372)
Q Consensus 276 ~Lk---~KILIk~K~p 288 (372)
+|. .+|||-...+
T Consensus 162 ~l~~~~krVIi~y~~~ 177 (290)
T cd08616 162 YLWEKGYQVIVFYHDP 177 (290)
T ss_pred HHHhCCCEEEEEECCC
Confidence 995 4566655443
No 43
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=96.76 E-value=0.0045 Score=59.02 Aligned_cols=123 Identities=24% Similarity=0.387 Sum_probs=76.8
Q ss_pred cCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccccc------chHHHHHHHHhhc--cc-
Q 043888 155 TGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTP------VSLINCLKSIRDN--AF- 225 (372)
Q Consensus 155 SSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~------i~f~~vl~aIk~~--AF- 225 (372)
-|||-|.- ..|.-.||..||-.||+|||=-+ ++.+|.|-..+..+ +.+..+++.++.. +|
T Consensus 4 hsHNDY~r---------~~Pl~~Al~~g~~svEaDV~l~d--g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWR---------KRPLYDALSAGFGSIEADVWLVN--GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccc---------ccchHHHHHcCCCEEEEeEEEEC--CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 48999975 45777899999999999999642 46889998665433 4455566655443 23
Q ss_pred ccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhhcCCeEeecCCCCccccc
Q 043888 226 VSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESLKQRIIISTKPPKEYLEK 294 (372)
Q Consensus 226 ~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~Lk~KILIk~K~pke~l~~ 294 (372)
....-|++|-||...+...=-.+..-..+-+.+..+....+.. .|-| =.|+|.+..|.+...+
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~~~~~~~--~~~p----vtvV~tGn~p~~~~~~ 135 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYLSYYDKL--VPGP----VTVVITGNRPKEEVKS 135 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCceeecCcE--EecC----eEEEEeCCCChhhhcc
Confidence 4456799999999987554333333444556665554322211 1111 1356777777665543
No 44
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=96.70 E-value=0.0086 Score=59.26 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=92.0
Q ss_pred cCCCCCccccccccCCccccc---CCCCC---CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 043888 142 NDMTAPLSNYFIYTGHNSYLT---GNQLS---SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLIN 215 (372)
Q Consensus 142 qDMt~PLShYFIsSSHNTYLt---G~QL~---g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~ 215 (372)
-+-+.||++=.|--+|||.-. +..+. +.+-...+..=|..|+|.+.|-|=. +..++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 356789999999999997642 22211 2333445778899999999988743 367999963 2468999
Q ss_pred HHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhh-cCCeEeecCCCC
Q 043888 216 CLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESL-KQRIIISTKPPK 289 (372)
Q Consensus 216 vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~L-k~KILIk~K~pk 289 (372)
||..|+.+-=....=-|||.+......+-.....+.|.+.||+.|+.+. ...... +.++| +++|||--++.+
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~~~ 168 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKPRK 168 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcCCC
Confidence 9999998743333344999995553222111344688899999998652 222222 56666 566777777654
No 45
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.66 E-value=0.0063 Score=56.07 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.|.+++..|+..|+.+||+||+--.+ +.++|.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 34678899999999999999999997655 57889998765
No 46
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.65 E-value=0.011 Score=52.18 Aligned_cols=51 Identities=22% Similarity=0.292 Sum_probs=43.6
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRD 222 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~ 222 (372)
...+.|.+++..|++.||++||+|+.--.+ +.++|.|- -.+|.++++..++
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~ 60 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG 60 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc
Confidence 445889999999999999999999996554 46888898 7789999998876
No 47
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.62 E-value=0.0034 Score=57.04 Aligned_cols=38 Identities=24% Similarity=0.251 Sum_probs=30.9
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRT 206 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~T 206 (372)
.+.|.+++..|+..|+++||+|||--.+ +.|+|+|..+
T Consensus 9 pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~ 46 (256)
T PF03009_consen 9 PENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDT 46 (256)
T ss_dssp STTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSB
T ss_pred hhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCe
Confidence 4889999999999999999999998665 5789999854
No 48
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.56 E-value=0.014 Score=54.50 Aligned_cols=40 Identities=20% Similarity=0.295 Sum_probs=34.3
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|+..||++||+|++--.+ +.|+|.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 44778899999999999999999997554 46899998877
No 49
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=96.49 E-value=0.028 Score=55.43 Aligned_cols=140 Identities=14% Similarity=0.176 Sum_probs=93.1
Q ss_pred CCCccccccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEe---ecC----CCCCCceEeeCCcccccchHHHHH
Q 043888 145 TAPLSNYFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDI---WPN----STREDINVLHGRTLTTPVSLINCL 217 (372)
Q Consensus 145 t~PLShYFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~---Wdg----~~~~~p~V~HG~TlTs~i~f~~vl 217 (372)
+.||++..|-.||||.-.+---.+.+=...+..-|..|+|.+.|=| ++. ....+..++||. -...+|.++|
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg~--~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHNM--IPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEeec--cCCCcHHHHH
Confidence 5799999999999986554322234445567788999999987755 221 112344566663 3457999999
Q ss_pred HHHhhcccccCCCCeEEEeCC-----C-CCHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCChhhhc---CCeEeecC
Q 043888 218 KSIRDNAFVSSPYPVIITLED-----H-LTPDLQAKAAEMITQIFGKMLYFPE--SNKLAEFPSPESLK---QRIIISTK 286 (372)
Q Consensus 218 ~aIk~~AF~~S~YPVILSLE~-----H-cs~~qQ~~mA~~l~~ifGd~L~~p~--~~~~~~lPSPe~Lk---~KILIk~K 286 (372)
+.|+.+.=....=-|||.+-+ | .++.. ..+.+.+.+.|++.-+.|. ......-|+.++|. ++|||--+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999977555555669999942 3 34565 5777889999998655542 11123357889983 46666665
Q ss_pred C
Q 043888 287 P 287 (372)
Q Consensus 287 ~ 287 (372)
.
T Consensus 163 ~ 163 (281)
T cd08620 163 D 163 (281)
T ss_pred C
Confidence 4
No 50
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.42 E-value=0.022 Score=52.59 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|+..||.+||+||+--.+ +.++|.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 34678899999999999999999997655 57899998876
No 51
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=96.16 E-value=0.037 Score=51.46 Aligned_cols=40 Identities=25% Similarity=0.426 Sum_probs=34.3
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.|.+++..|+..||++||+|++--.+ +.++|.|-.||
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 45778899999999999999999997655 47889998776
No 52
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.91 E-value=0.052 Score=51.33 Aligned_cols=39 Identities=28% Similarity=0.441 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+-+..++.+|+..||..||+|+|--.+ +.++|.|-.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 3677889999999999999999996554 46899998776
No 53
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.80 E-value=0.041 Score=51.72 Aligned_cols=40 Identities=33% Similarity=0.357 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
-+.+..+|..|+..||..||+||+--.+ +.++|+|..||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4678899999999999999999997655 578999999873
No 54
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=95.73 E-value=0.048 Score=44.60 Aligned_cols=63 Identities=11% Similarity=0.235 Sum_probs=49.8
Q ss_pred hHHHHHHHHhcCC---CCCcCHHHHHHHHHHH--hCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQD---GLHMKPSEFRRFMVEH--QGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~~---~~~mt~~~l~~FL~~~--Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..|-.+|.+|++. .++|+.++|+..|..+ .|+ ..+.+++.++++.+.. .+.+.+++++|..+|
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~-k~t~~ev~~m~~~~D~-------d~dG~Idf~EFv~lm 77 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGS-KLQDAEIAKLMEDLDR-------NKDQEVNFQEYVTFL 77 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHhcC-------CCCCCCcHHHHHHHH
Confidence 3578899999972 3599999999999752 465 4688999999988752 134689999999988
No 55
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.59 E-value=0.053 Score=51.34 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 169 DCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 169 ~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.|..++..|+..||+.||+|++--.+ +.|+|.|=.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 678899999999999999999998665 46899997765
No 56
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=95.25 E-value=0.1 Score=48.51 Aligned_cols=79 Identities=19% Similarity=0.373 Sum_probs=54.2
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccc------------------------cc-hHHHHHHHH
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTT------------------------PV-SLINCLKSI 220 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs------------------------~i-~f~~vl~aI 220 (372)
..-+-|..++..|+..||+.||+|++--.+ +.++|+|=.||.. +| +|.+||+.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345778899999999999999999997555 4789999877521 23 689999876
Q ss_pred hhcccccCCCCeEEEeCCCCCHHHHHHHHHHHHH
Q 043888 221 RDNAFVSSPYPVIITLEDHLTPDLQAKAAEMITQ 254 (372)
Q Consensus 221 k~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ 254 (372)
+.. -+|.|=|-. +....++++++++
T Consensus 90 ~~~------~~l~iEiK~---~~~~~~~~~~l~~ 114 (226)
T cd08568 90 PND------AIINVEIKD---IDAVEPVLEIVEK 114 (226)
T ss_pred CCC------cEEEEEECC---ccHHHHHHHHHHH
Confidence 431 244444442 2333456666554
No 57
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.11 E-value=0.13 Score=49.23 Aligned_cols=39 Identities=28% Similarity=0.474 Sum_probs=32.7
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRT 206 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~T 206 (372)
.-+-+..++..|+..|+..||+|||=-.+ +.++|+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45778899999999999999999996544 4689999853
No 58
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.11 E-value=0.14 Score=48.32 Aligned_cols=39 Identities=26% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+.+..++..|+..||..||+||+--.+ +.|+|.|-.||
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTL 50 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCcc
Confidence 4677899999999999999999997655 46889998765
No 59
>PTZ00184 calmodulin; Provisional
Probab=94.98 E-value=0.12 Score=43.17 Aligned_cols=99 Identities=17% Similarity=0.305 Sum_probs=58.4
Q ss_pred HHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCC
Q 043888 13 EKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCT 91 (372)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t 91 (372)
+.++.|| .-.|.+.. |..+|+.|..+...+. ........+..+|..|-.+ .+.|+.++|..+|....- ..+
T Consensus 47 ~~~~~~~-~~~d~~~~----g~i~~~ef~~~l~~~~-~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~ 118 (149)
T PTZ00184 47 AELQDMI-NEVDADGN----GTIDFPEFLTLMARKM-KDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLT 118 (149)
T ss_pred HHHHHHH-HhcCcCCC----CcCcHHHHHHHHHHhc-cCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCC
Confidence 4455564 55554332 5566666543333221 1123345677788888543 367888888888876532 356
Q ss_pred HHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 92 LSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 92 ~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.+.+..|+..+... ..+.+++++|..++
T Consensus 119 ~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 119 DEEVDEMIREADVD-------GDGQINYEEFVKMM 146 (149)
T ss_pred HHHHHHHHHhcCCC-------CCCcCcHHHHHHHH
Confidence 67777777665321 23568888888887
No 60
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.66 E-value=0.15 Score=47.85 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=53.2
Q ss_pred CHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHHHHHH
Q 043888 171 SEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQAKAAE 250 (372)
Q Consensus 171 S~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~~mA~ 250 (372)
+..++.+|+.. ..||+|+|.. + +.++|.|-.|+..-.+|.+|++++. ..+++|-+- ......++++
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~-------~~~l~inIK---~~~l~~~l~~ 73 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN-------HGTLILNIK---AEGLELRLKK 73 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc-------cccEEEEEC---chhHHHHHHH
Confidence 47789999998 9999999976 4 5799999999988888999998874 345666655 2245556666
Q ss_pred HHHH
Q 043888 251 MITQ 254 (372)
Q Consensus 251 ~l~~ 254 (372)
++++
T Consensus 74 li~~ 77 (192)
T cd08584 74 LLAE 77 (192)
T ss_pred HHHh
Confidence 6553
No 61
>PTZ00183 centrin; Provisional
Probab=94.55 E-value=0.19 Score=42.81 Aligned_cols=101 Identities=20% Similarity=0.282 Sum_probs=68.4
Q ss_pred hHHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCC
Q 043888 11 NKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETG 89 (372)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~ 89 (372)
+.+-+..+| +..|.+. .|..+|..|.-+..... ....+..++..+|..|..+ .+.++.++|..+|...+ . .
T Consensus 51 ~~~~~~~l~-~~~d~~~----~g~i~~~eF~~~~~~~~-~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~ 122 (158)
T PTZ00183 51 KKEEIKQMI-ADVDKDG----SGKIDFEEFLDIMTKKL-GERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-T 122 (158)
T ss_pred CHHHHHHHH-HHhCCCC----CCcEeHHHHHHHHHHHh-cCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-C
Confidence 444566664 6666544 36777777643322211 1223456899999998644 47899999999998654 3 4
Q ss_pred CCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 90 CTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 90 ~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.+.+.+..++..+... ..+.|+++.|.+++
T Consensus 123 l~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~ 152 (158)
T PTZ00183 123 ITDEELQEMIDEADRN-------GDGEISEEEFYRIM 152 (158)
T ss_pred CCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHH
Confidence 7788889999887521 23569999999988
No 62
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=94.15 E-value=0.076 Score=50.99 Aligned_cols=40 Identities=20% Similarity=0.370 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
-+.|..++..|+..||++||+|++--.+ +.++|+|-.||.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCccc
Confidence 4678899999999999999999998665 578999988763
No 63
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.94 E-value=0.069 Score=50.35 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
.-+-|..++.+|+..||++||+|++--.+ +.++|+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 44778899999999999999999996554 478999988763
No 64
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.84 E-value=0.079 Score=50.18 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=34.5
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.|..++..|+..||..||+|||--.+ +.++|+|-.||
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l 52 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETL 52 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCcc
Confidence 34788999999999999999999997655 46899998776
No 65
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=93.75 E-value=1.2 Score=46.05 Aligned_cols=111 Identities=17% Similarity=0.276 Sum_probs=73.7
Q ss_pred HHHHHHhcCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHHhhccccc--CCCCeEEEeCCC---CCHHHHHH
Q 043888 174 PIAKALQRGVRVIELDIWPNS-TREDINVLHGRTLTTPVSLINCLKSIRDNAFVS--SPYPVIITLEDH---LTPDLQAK 247 (372)
Q Consensus 174 ~Yi~AL~~GCRcIELD~Wdg~-~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~--S~YPVILSLE~H---cs~~qQ~~ 247 (372)
.+..=|..|+|.+-|=|=-.+ +.++..++||.- .++|.+||+.|+++.=.. ..=-|||.+-.. -....+.+
T Consensus 89 sI~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~ 165 (380)
T PTZ00268 89 SVRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGK 165 (380)
T ss_pred CHHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHH
Confidence 356668889999888774322 224567777752 478999999999865442 234577776442 23555556
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCChhhhc-----CCeEeecCCCCcc
Q 043888 248 AAEMITQIFGKMLYFPESNKLAEFPSPESLK-----QRIIISTKPPKEY 291 (372)
Q Consensus 248 mA~~l~~ifGd~L~~p~~~~~~~lPSPe~Lk-----~KILIk~K~pke~ 291 (372)
+.+.|++ ||+.|. |..... . -+.++|- .+|||-.+++..+
T Consensus 166 ll~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~~~~ 210 (380)
T PTZ00268 166 FFRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASGRNY 210 (380)
T ss_pred HHHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEcccccc
Confidence 7777777 999886 443333 2 3788885 7799998666544
No 66
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=93.73 E-value=0.079 Score=50.59 Aligned_cols=40 Identities=28% Similarity=0.328 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|+..||..||+||+--.+ +.|+|+|-.||
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l 53 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTL 53 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCcc
Confidence 34678899999999999999999997655 47899998776
No 67
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=93.24 E-value=0.44 Score=39.01 Aligned_cols=64 Identities=13% Similarity=0.255 Sum_probs=47.6
Q ss_pred hHHHHHHHHhcC--CCC-CcCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ--DGL-HMKPSEFRRFMVEHQGE---TGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~--~~~-~mt~~~l~~FL~~~Q~e---~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..+..+|..|+. +.+ .|+.++|+..|....++ ...+...+.+|++.+-. -+.+.+++++|..++
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~-------n~dG~Idf~EF~~l~ 79 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS-------NKDNEVDFNEFVVLV 79 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC-------CCCCCCCHHHHHHHH
Confidence 367888999994 334 59999999999876542 12356788889888742 134679999999887
No 68
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=93.10 E-value=0.13 Score=49.48 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=38.0
Q ss_pred cccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 160 YLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 160 YLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
|+.+.-+.-+.+..++..|+..||..||+||+--.+ +.|+|+|=.||.
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~ 59 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLR 59 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeE
Confidence 444434555778899999999999999999997544 478999988764
No 69
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=93.05 E-value=0.37 Score=39.69 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=49.7
Q ss_pred hHHHHHHHHhcC--CCCCcCHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ--DGLHMKPSEFRRFMVEHQGETGCTL-SRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~--~~~~mt~~~l~~FL~~~Q~e~~~t~-~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..|..+|..|+. +.++|+.++|+..|..+=++ .++. +++..+|..+-. -+.+.+++++|..++
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~-------d~DG~I~F~EF~~l~ 73 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV-------NQDSKLSFEEFWELI 73 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC-------CCCCCCcHHHHHHHH
Confidence 368899999987 55899999999999975444 3566 789999887642 134689999999888
No 70
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=92.99 E-value=0.13 Score=50.28 Aligned_cols=39 Identities=21% Similarity=0.334 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+-+..++..|+..||+.||+|||--.+ +.|+|+|-.|+
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l 78 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENL 78 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCccc
Confidence 3677889999999999999999997554 57899998776
No 71
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=92.66 E-value=0.18 Score=51.14 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=34.9
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.-+.+.++|..|+..|+..||+|||=-.+ +.|+|+|..+|
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l 78 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYL 78 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchh
Confidence 344788999999999999999999997655 46899998765
No 72
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=92.63 E-value=0.18 Score=48.97 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=33.8
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.-+-+..++..|+..||..||+|||--.+ +.++|.|-.||
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l 52 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDL 52 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCch
Confidence 344677889999999999999999997554 46889997765
No 73
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=92.62 E-value=0.16 Score=50.54 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=34.9
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.-+.+..+|..|+..||..||+||+--.+ +.++|.|..+|
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l 52 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYL 52 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchh
Confidence 445788999999999999999999997555 46899998776
No 74
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=92.50 E-value=0.44 Score=38.63 Aligned_cols=63 Identities=11% Similarity=0.212 Sum_probs=47.8
Q ss_pred hHHHHHHHHhcCC---CCCcCHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQD---GLHMKPSEFRRFMVEHQGETGCT----LSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~~---~~~mt~~~l~~FL~~~Q~e~~~t----~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..|..+|.+||.. .+.|+.++|+..|...-++ ..+ .+++..++..+.. ...+.++++.|..++
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~-------d~dG~I~f~eF~~~~ 77 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT-------NQDGQLSFEEFLVLV 77 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC-------CCCCcCcHHHHHHHH
Confidence 3578899999965 3699999999999864444 344 6788888887642 134679999999987
No 75
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=92.50 E-value=0.19 Score=48.39 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 169 DCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 169 ~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+-+..++.+|+..||..||+|||--.+ +.|+|+|=.||
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 567889999999999999999997555 57899999888
No 76
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=92.32 E-value=0.17 Score=48.49 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=33.4
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.|..++..|+..||..||+|+|=-.+ +.++|.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 44678899999999999999999997555 46889997665
No 77
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=91.85 E-value=0.19 Score=49.62 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+.+..+|..|+..|+..||+|++--.+ +.++|.|-.+|
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l 52 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINL 52 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchh
Confidence 3667899999999999999999997655 46899998776
No 78
>PTZ00184 calmodulin; Provisional
Probab=91.80 E-value=0.69 Score=38.64 Aligned_cols=102 Identities=10% Similarity=0.086 Sum_probs=69.3
Q ss_pred chHHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCC
Q 043888 10 KNKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGET 88 (372)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~ 88 (372)
+..++.+..| +..|++.. |+.++..+.-+...+... ...+++..+|..+..++ +.++.++|..+|......
T Consensus 8 ~~~~~~~~~F-~~~D~~~~----G~i~~~e~~~~l~~~~~~--~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~- 79 (149)
T PTZ00184 8 EQIAEFKEAF-SLFDKDGD----GTITTKELGTVMRSLGQN--PTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD- 79 (149)
T ss_pred HHHHHHHHHH-HHHcCCCC----CcCCHHHHHHHHHHhCCC--CCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC-
Confidence 4456677775 77777553 777777776555544322 33568999999986543 789999999998865332
Q ss_pred CCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 89 GCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 89 ~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..+.+.+..++..+... +.+.|+.++|.++|
T Consensus 80 ~~~~~~~~~~F~~~D~~-------~~g~i~~~e~~~~l 110 (149)
T PTZ00184 80 TDSEEEIKEAFKVFDRD-------GNGFISAAELRHVM 110 (149)
T ss_pred CcHHHHHHHHHHhhCCC-------CCCeEeHHHHHHHH
Confidence 23455677777776421 33569999999998
No 79
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=91.79 E-value=0.19 Score=49.06 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|+..||..||+||+--.+ +.++|+|-.+|
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l 52 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTL 52 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchh
Confidence 34778899999999999999999997655 46889997765
No 80
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=91.72 E-value=0.78 Score=37.60 Aligned_cols=63 Identities=13% Similarity=0.334 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCC-C--CCcCHHHHHHHHHHHhC---CCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 57 DVKMAFMHFSQD-G--LHMKPSEFRRFMVEHQG---ETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 57 ei~~lF~~ys~~-~--~~mt~~~l~~FL~~~Q~---e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
-|..+|.+|++. + ..|+.++|+.||..+-. ....+...+.+++..+.. -+.+.+++++|..++
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~-------d~DG~I~f~EF~~l~ 78 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL-------NSDGQLDFQEFLNLI 78 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC-------CCCCcCcHHHHHHHH
Confidence 578899998853 2 38999999999998731 112345678888887542 134679999999887
No 81
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=91.70 E-value=0.42 Score=34.45 Aligned_cols=49 Identities=14% Similarity=0.318 Sum_probs=40.0
Q ss_pred CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 70 LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 70 ~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
+.|+.++|+.+| ...|....+.+++..|+..+-.. ..+.+++++|..+|
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~-------~~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD-------GDGYISFDEFISMM 51 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS-------SSSSEEHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC-------CCCCCCHHHHHHHH
Confidence 679999999999 66666437889999999988632 34789999999987
No 82
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=91.61 E-value=0.25 Score=46.38 Aligned_cols=39 Identities=21% Similarity=0.173 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+-+..++..|++.|++.||+|++--.+ +.++|+|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 3677889999999999999999997554 57899997654
No 83
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=91.40 E-value=0.32 Score=45.52 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=33.5
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|++.|++.||+||+--.+ +.++|.|-.++
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l 50 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNL 50 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCcc
Confidence 44778899999999999999999996554 46889997765
No 84
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=91.28 E-value=1.1 Score=37.52 Aligned_cols=63 Identities=11% Similarity=0.325 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCCCCcCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 57 DVKMAFMHFSQDGLHMKPSEFRRFMVEHQGE---TGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 57 ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e---~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
-|-.+|.+||++...|+..+|...|..+=.. ...+...+..|++.+-. -+.+.+++..|..++
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~-------n~Dg~vdF~EF~~Lv 74 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD-------CRDGKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC-------CCCCcCcHHHHHHHH
Confidence 5778999999877899999999999765431 11245667777777642 234679999999887
No 85
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=91.24 E-value=0.91 Score=39.75 Aligned_cols=102 Identities=17% Similarity=0.279 Sum_probs=72.3
Q ss_pred hHHHHHhhhhhcCccccCCCCccccccccccccccc-cccCCCC--CchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhC
Q 043888 11 NKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRK-FKIREPE--PPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQG 86 (372)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~-~~~~~~~--~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~ 86 (372)
.++.++.|+ ++.|++.+ |..+|..|.....+ ....... ...+|+.+|.-|-.+ .+++|+++|+++|...-.
T Consensus 42 t~~el~~~~-~~~D~dg~----g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~ 116 (151)
T KOG0027|consen 42 TEEELRDLI-KEIDLDGD----GTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGE 116 (151)
T ss_pred CHHHHHHHH-HHhCCCCC----CeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC
Confidence 567788886 88998865 77777776544333 2222221 345999999999654 489999999999998643
Q ss_pred CCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 87 ETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 87 e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..+.+.+..+|..+.. -..+.+++++|...+
T Consensus 117 --~~~~~e~~~mi~~~d~-------d~dg~i~f~ef~~~m 147 (151)
T KOG0027|consen 117 --KLTDEECKEMIREVDV-------DGDGKVNFEEFVKMM 147 (151)
T ss_pred --cCCHHHHHHHHHhcCC-------CCCCeEeHHHHHHHH
Confidence 4678888888877542 123567889998877
No 86
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=91.22 E-value=0.24 Score=47.80 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 169 DCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 169 ~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
+-+..++..|+..||..||+||+--.+ +.|+|+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 678899999999999999999997554 578999988764
No 87
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=91.12 E-value=0.27 Score=49.12 Aligned_cols=48 Identities=25% Similarity=0.360 Sum_probs=38.0
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 156 GHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 156 SHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+|.-+ .-..-+.+..++..|+..||.+||+||+--.+ +.++|.|-.||
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL 78 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGL 78 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCcc
Confidence 66653 22335778899999999999999999997655 47899998775
No 88
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=90.88 E-value=0.28 Score=48.61 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT 208 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT 208 (372)
+.-+.+..+|..|+..||..||+||+=-.+ +.++|.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCccc
Confidence 445788999999999999999999997655 578999998763
No 89
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=90.81 E-value=0.28 Score=46.52 Aligned_cols=40 Identities=28% Similarity=0.368 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+-|..++..|+..|+.+||+||.--.+ +.++|+|=.||
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l 59 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTL 59 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCcc
Confidence 34667889999999999999999997655 57899997766
No 90
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=90.58 E-value=1.2 Score=35.94 Aligned_cols=64 Identities=8% Similarity=0.215 Sum_probs=48.4
Q ss_pred hHHHHHHHHhc-CC-CC-CcCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFS-QD-GL-HMKPSEFRRFMVEHQGET---GCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys-~~-~~-~mt~~~l~~FL~~~Q~e~---~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
++|.++|..|. .+ .+ .|+.++|+..|...-+.. ..+.+.+++||..+... ..+.++++.|..++
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-------~~G~I~f~eF~~l~ 78 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-------GDGEVDFQEFVVLV 78 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-------CCCcCcHHHHHHHH
Confidence 67999999996 43 46 499999999998644431 24678899999887521 23679999999887
No 91
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=90.30 E-value=0.45 Score=46.87 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=34.4
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.-+.+..+|..|+..||..||+|++--.+ +.++|.|=.+|
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l 52 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINL 52 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEeccccc
Confidence 445788999999999999999999997655 46889996665
No 92
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=90.30 E-value=0.27 Score=36.61 Aligned_cols=60 Identities=18% Similarity=0.352 Sum_probs=41.9
Q ss_pred HHHHHHHhcC-CCCCcCHHHHHHHHHHHhCCCCCCHHHHHHH----HHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 58 VKMAFMHFSQ-DGLHMKPSEFRRFMVEHQGETGCTLSRAEEI----VNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 58 i~~lF~~ys~-~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~I----i~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
|+.+|..|-. +.+.++.++|..++...... .+...+... +..+-. -..+.|++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~-------d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFREFDT-------DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHHHTT-------TSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhCC-------CCcCCCcHHHHhccC
Confidence 6789999954 45899999999999987653 223344444 444431 134789999998874
No 93
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=89.45 E-value=2.3 Score=29.23 Aligned_cols=60 Identities=17% Similarity=0.422 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 58 VKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 58 i~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
+..+|..|..+. +.|+.++|...|.... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~-------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD-------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC-------CCCeEeHHHHHHHh
Confidence 677888886544 7899999999998653 3 45677788888887521 23569999998876
No 94
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=89.36 E-value=2 Score=34.93 Aligned_cols=60 Identities=12% Similarity=0.145 Sum_probs=46.1
Q ss_pred hHHHHHHHHhcC-CCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ-DGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~-~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..+..+|..|-. +.+.|+.++|.++|+.. ..+.+.+..|+..+... ..+.|++++|..+|
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~-------~~g~I~~~eF~~~~ 70 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID-------NDGELDKDEFALAM 70 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC-------CCCCcCHHHHHHHH
Confidence 467778888865 44799999999999872 35778888888876421 23679999999877
No 95
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=89.31 E-value=4.3 Score=40.34 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=61.4
Q ss_pred CCCccccccccCCcccc---cCC-------CCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc------
Q 043888 145 TAPLSNYFIYTGHNSYL---TGN-------QLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT------ 208 (372)
Q Consensus 145 t~PLShYFIsSSHNTYL---tG~-------QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT------ 208 (372)
+.||++-.|=-||||.- .+. --.+.+-...+..=|..|+|.+.|-+=-.. .++..++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~-~~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITH-GGELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcC-CCcEEEEecccccccccCc
Confidence 47999999999999752 222 111233344577889999999888775322 2467888985422
Q ss_pred ccchHHHHHHHHhhcccccCCCCeEEEeC
Q 043888 209 TPVSLINCLKSIRDNAFVSSPYPVIITLE 237 (372)
Q Consensus 209 s~i~f~~vl~aIk~~AF~~S~YPVILSLE 237 (372)
+..+|.++|+.|+.+.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999998744332333777665
No 96
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=89.30 E-value=0.5 Score=46.33 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=34.7
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+.-+.+..+|..|+..||..||+||+--.+ +.|+|+|=.++
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l 59 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTI 59 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcc
Confidence 345778999999999999999999997655 57899998776
No 97
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=89.28 E-value=2.1 Score=34.95 Aligned_cols=64 Identities=14% Similarity=0.260 Sum_probs=47.6
Q ss_pred hHHHHHHHHhcC--CCC-CcCHHHHHHHHHHHh---CCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ--DGL-HMKPSEFRRFMVEHQ---GETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~--~~~-~mt~~~l~~FL~~~Q---~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..|..+|..|++ +.+ .|+.++|+..|..+= .....+.+++.++|..+... +.+.++++.|..++
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-------~dG~v~f~eF~~li 77 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-------GDGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-------CCCcCcHHHHHHHH
Confidence 468999999972 446 599999999998710 11235778899999876421 34679999999887
No 98
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=88.37 E-value=0.76 Score=46.01 Aligned_cols=41 Identities=22% Similarity=0.281 Sum_probs=34.3
Q ss_pred CCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 166 LSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
..-+.+..++..|+..||..||+||+--.+ +.++|.|-.||
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL 74 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTL 74 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcc
Confidence 444777889999999999999999997555 47899997776
No 99
>PTZ00183 centrin; Provisional
Probab=87.96 E-value=2.9 Score=35.46 Aligned_cols=101 Identities=11% Similarity=0.105 Sum_probs=67.9
Q ss_pred hHHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcC-CCCCcCHHHHHHHHHHHhCCCC
Q 043888 11 NKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQ-DGLHMKPSEFRRFMVEHQGETG 89 (372)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~-~~~~mt~~~l~~FL~~~Q~e~~ 89 (372)
..+++...| ...|++.+ |+.++..+..+.+.... .....++..+|..+.. +.+.++.++|...+...... .
T Consensus 15 ~~~~~~~~F-~~~D~~~~----G~i~~~e~~~~l~~~g~--~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-~ 86 (158)
T PTZ00183 15 QKKEIREAF-DLFDTDGS----GTIDPKELKVAMRSLGF--EPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-R 86 (158)
T ss_pred HHHHHHHHH-HHhCCCCC----CcccHHHHHHHHHHhCC--CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-C
Confidence 345677775 77777664 66666776555554322 1345689999999865 34789999999988765332 2
Q ss_pred CCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 90 CTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 90 ~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
...+.++.++..+... ..+.|+.++|..+|
T Consensus 87 ~~~~~l~~~F~~~D~~-------~~G~i~~~e~~~~l 116 (158)
T PTZ00183 87 DPREEILKAFRLFDDD-------KTGKISLKNLKRVA 116 (158)
T ss_pred CcHHHHHHHHHHhCCC-------CCCcCcHHHHHHHH
Confidence 3456677777766421 23579999999998
No 100
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=87.23 E-value=3.3 Score=32.76 Aligned_cols=64 Identities=9% Similarity=0.223 Sum_probs=47.2
Q ss_pred hHHHHHHHHhcC---CCCCcCHHHHHHHHHHHhCCC---CCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ---DGLHMKPSEFRRFMVEHQGET---GCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~---~~~~mt~~~l~~FL~~~Q~e~---~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.++..+|..|.. +.+.++.++|..+|...=+.. ..+...+..|+..+... +.+.++++.|...|
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~-------~~g~I~f~eF~~~~ 77 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN-------KDGKVDFQEFLVLI 77 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC-------CCCcCcHHHHHHHH
Confidence 467788999977 458999999999997521221 23577888888876521 23679999999987
No 101
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=86.88 E-value=3.1 Score=33.72 Aligned_cols=64 Identities=13% Similarity=0.323 Sum_probs=48.4
Q ss_pred hHHHHHHHHhcC-C--CCCcCHHHHHHHHHHHhCC---CCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ-D--GLHMKPSEFRRFMVEHQGE---TGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~-~--~~~mt~~~l~~FL~~~Q~e---~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.++..+|..|.. + .+.++.++|+..|...-+. ...+.+.+..+++.+... ..+.++++.|...+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~-------~dg~I~f~eF~~l~ 77 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN-------RDGKVNFEEFVSLV 77 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC-------CCCcCcHHHHHHHH
Confidence 578899999975 4 3799999999999863321 135678889999887521 23679999999887
No 102
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=86.19 E-value=4.6 Score=40.71 Aligned_cols=107 Identities=29% Similarity=0.360 Sum_probs=66.6
Q ss_pred HHHHHhcCCcEEEEEee--cCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCC----CCHHHHHHH
Q 043888 175 IAKALQRGVRVIELDIW--PNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDH----LTPDLQAKA 248 (372)
Q Consensus 175 Yi~AL~~GCRcIELD~W--dg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~H----cs~~qQ~~m 248 (372)
+..-|..|+|.+-|=+= +++...+.-|+||-+.| +++.+||.-|+++-=.+-.= ||| ||.. .+..-=.++
T Consensus 72 i~~QL~~GvRylDlRi~~~~~~~D~~~~i~HGl~~~--~~v~~vL~ev~~Fl~~h~eE-VVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 72 IREQLVAGVRYLDLRIGYKLMDPDREFYICHGLFST--YPVLEVLNEVRQFLSEHPEE-VVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred hHHHHhhcceEEEEEeeeccCCCCcceEEEeecccc--ccHHHHHHHHHHHHHhCCCE-EEE-EeccchhccCccHHHHH
Confidence 44567789999877665 22222346899995544 45577777777643333232 333 4432 466777788
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCChhhh---cCCeEeecCCC
Q 043888 249 AEMITQIFGKMLYFPESNKLAEFPSPESL---KQRIIISTKPP 288 (372)
Q Consensus 249 A~~l~~ifGd~L~~p~~~~~~~lPSPe~L---k~KILIk~K~p 288 (372)
..++++.||++|+. ++...-|+.+.| +-.|+|--.-|
T Consensus 148 ~~~ik~~~g~~l~~---d~~~~~~~lr~L~~r~~~Vii~~~sp 187 (306)
T KOG4306|consen 148 VLVIKQGFGDILCD---DSLFEKPTLRELWERVQQVIIPYPSP 187 (306)
T ss_pred HHHHHHHhcccccC---hhhcccccHHHHHhcceEEEEecCCc
Confidence 88999999999993 334556677777 33344444444
No 103
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=85.95 E-value=0.83 Score=43.37 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+-+..++..|+..|+ .||+||+--.+ +.++|+|=.||
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l 57 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNL 57 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchH
Confidence 3567889999999999 89999997655 57889997664
No 104
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=85.23 E-value=1 Score=42.35 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=31.8
Q ss_pred CCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCc
Q 043888 169 DCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRT 206 (372)
Q Consensus 169 ~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~T 206 (372)
+-+..+|..|+..|+.+||+|+.--.+ +.++|+|=+|
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 667889999999999999999997655 5788999764
No 105
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=84.82 E-value=5.5 Score=29.08 Aligned_cols=57 Identities=18% Similarity=0.189 Sum_probs=42.2
Q ss_pred HHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 59 KMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 59 ~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
+.+|..+..+ .+.++.++|..+|... + .+.+.+..|+..+... ..+.++++.|...+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~-------~~g~i~~~ef~~~~ 59 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD-------KDGKLDKEEFAIAM 59 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC-------CCCcCCHHHHHHHH
Confidence 3577777543 4799999999999864 3 3677888898876521 23579999998776
No 106
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=84.81 E-value=4.1 Score=37.44 Aligned_cols=98 Identities=13% Similarity=0.221 Sum_probs=70.7
Q ss_pred HHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCC
Q 043888 13 EKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCT 91 (372)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t 91 (372)
+=+.-|+ -+.|. +.++.+|..|.++.-++.. ...++++|...|+-|-.+ .++++..+|++-|... |+ ..+
T Consensus 56 ~ei~~l~-~~~d~-----~~~~idf~~Fl~~ms~~~~-~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-ge-~~~ 126 (160)
T COG5126 56 AEINKLF-EEIDA-----GNETVDFPEFLTVMSVKLK-RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSL-GE-RLS 126 (160)
T ss_pred HHHHHHH-HhccC-----CCCccCHHHHHHHHHHHhc-cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-cc-cCC
Confidence 3344554 44444 2478888888777665433 346789999999999654 4899999999999843 34 567
Q ss_pred HHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 92 LSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 92 ~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.+.+..+|+.+... +.+.++.+.|...+
T Consensus 127 deev~~ll~~~d~d-------~dG~i~~~eF~~~~ 154 (160)
T COG5126 127 DEEVEKLLKEYDED-------GDGEIDYEEFKKLI 154 (160)
T ss_pred HHHHHHHHHhcCCC-------CCceEeHHHHHHHH
Confidence 88899999887531 34679999999876
No 107
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=84.73 E-value=2.1 Score=35.83 Aligned_cols=62 Identities=8% Similarity=0.110 Sum_probs=39.2
Q ss_pred HHHHHHHhcCCCCCcCHHHHHHHHHHHhCCCC-----C----CHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhhhc
Q 043888 58 VKMAFMHFSQDGLHMKPSEFRRFMVEHQGETG-----C----TLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFLLF 128 (372)
Q Consensus 58 i~~lF~~ys~~~~~mt~~~l~~FL~~~Q~e~~-----~----t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL~~ 128 (372)
.+.+|..+++.++.|+...|..||++..+-.. . .+..+++.++... ....++++.|+.+| +
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~---------~~~~I~~~~Fl~wl-~ 74 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ---------LSPKITENQFLDWL-M 74 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT---------T-S-B-HHHHHHHH-H
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC---------CCCccCHHHHHHHH-H
Confidence 57899999998899999999999998764321 1 2233333333321 23679999999999 7
Q ss_pred C
Q 043888 129 D 129 (372)
Q Consensus 129 S 129 (372)
+
T Consensus 75 ~ 75 (90)
T PF09069_consen 75 S 75 (90)
T ss_dssp T
T ss_pred h
Confidence 5
No 108
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=84.71 E-value=1.4 Score=43.92 Aligned_cols=50 Identities=8% Similarity=-0.042 Sum_probs=37.0
Q ss_pred cccccCCcccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 151 YFIYTGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 151 YFIsSSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
||=+||-.. ..+. ++...++.|...|++.||+||+=-.+ +.|+|+|-+++
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i 52 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFV 52 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCce
Confidence 777766521 1111 45678999999999999999996544 46899999887
No 109
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=84.54 E-value=1.2 Score=45.45 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=32.3
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCC
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGR 205 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~ 205 (372)
.-+.+.++|..|+..|+..||+|++--.+ +.++|.|-.
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~ 66 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQ 66 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCC
Confidence 34778899999999999999999997655 468899985
No 110
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=84.53 E-value=1.1 Score=45.04 Aligned_cols=38 Identities=29% Similarity=0.540 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 169 DCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 169 ~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
+-+..++..|+..|+..||+||+--.+ +.++|+|=.||
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL 97 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTL 97 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCcc
Confidence 456789999999999999999998655 57899998886
No 111
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=84.35 E-value=1.2 Score=45.20 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc
Q 043888 167 SSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 167 ~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
.-+.+..++..|+..||..||+|++--.+ +.|+|+|=.||
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL 53 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTL 53 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCcc
Confidence 34667889999999999999999997555 46899998776
No 112
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=83.76 E-value=3.2 Score=38.83 Aligned_cols=100 Identities=17% Similarity=0.261 Sum_probs=66.8
Q ss_pred hHHHHHHHHhcCCCC--CcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh-hcCCCC
Q 043888 56 LDVKMAFMHFSQDGL--HMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL-LFDDDI 132 (372)
Q Consensus 56 ~ei~~lF~~ys~~~~--~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL-~~S~d~ 132 (372)
.++..+|.+..+... .++.+.|..-+...=.....+.+.|..+|..+-.. .....+|+.+|..|| +|.++.
T Consensus 19 ~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~------k~~~~iT~~Df~~F~A~FGP~~ 92 (181)
T PF11422_consen 19 RNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTP------KNTNVITIPDFYKFLARFGPEE 92 (181)
T ss_dssp HHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--------SS-SEEEHHHHHHHHHHSSSGG
T ss_pred HHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcC------CCCceeeHHHHHHHHHHhCCch
Confidence 478889999988655 78988887777665333345778888888876521 123678999999998 344443
Q ss_pred CCcc------------------ccccccCCCCCccccccccCCcccc
Q 043888 133 NGPI------------------KLEVHNDMTAPLSNYFIYTGHNSYL 161 (372)
Q Consensus 133 N~p~------------------~~~v~qDMt~PLShYFIsSSHNTYL 161 (372)
+-++ ...+-+-|+.+|+-||=++-||=..
T Consensus 93 tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~i 139 (181)
T PF11422_consen 93 TIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCFI 139 (181)
T ss_dssp GHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEEE
T ss_pred hHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceEE
Confidence 3211 1224567888999999999998543
No 113
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=83.31 E-value=1.7 Score=43.97 Aligned_cols=59 Identities=24% Similarity=0.193 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCccc--ccch---HHHHHHHHhhccccc
Q 043888 168 SDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLT--TPVS---LINCLKSIRDNAFVS 227 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlT--s~i~---f~~vl~aIk~~AF~~ 227 (372)
-.++..+|.+|+..|+.|||+|+=..++ +.++++|-.|.. +.++ +.-...-|+..++..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~r~~~v~~~~~~lt~~e~~~l~~~~ 145 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTVRVTGVPEIVFDLTWMELRKLGPKI 145 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcceeeecceeeeccCCHHHHhccCccc
Confidence 4688999999999999999999999877 567899976644 2221 333345556666543
No 114
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=82.55 E-value=0.35 Score=35.98 Aligned_cols=63 Identities=16% Similarity=0.171 Sum_probs=44.5
Q ss_pred HHHhhhhhcCccccCCCCccccccccccccccccccC--CCCCchHHHHHHHHhcCC-CCCcCHHHHHHHH
Q 043888 14 KTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIR--EPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFM 81 (372)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~--~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL 81 (372)
|++.+| +..|++.+ |..++..+.-+.+.+... ....+..|..+|..+-.+ .+.|+.++|..|+
T Consensus 1 ~l~~~F-~~~D~d~~----G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAF-KKFDKDGD----GYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHH-HHHSTTSS----SEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHH-HHHcCCcc----CCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 678886 88998886 888778876665554322 223345677779988554 4899999998874
No 115
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=82.49 E-value=1.4 Score=30.30 Aligned_cols=60 Identities=10% Similarity=0.049 Sum_probs=40.7
Q ss_pred HHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcC-CCCCcCHHHHHHHH
Q 043888 15 TDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQ-DGLHMKPSEFRRFM 81 (372)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~-~~~~mt~~~l~~FL 81 (372)
++.+| ...|.+.+ |..++..+..+.+.+. ...+.+++..+|..+-. +.+.++.++|..|+
T Consensus 2 ~~~~f-~~~d~~~~----g~l~~~e~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAF-RLFDKDGD----GTISADELKAALKSLG--EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHH-HHhCCCCC----CcCcHHHHHHHHHHhC--CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 55664 66676553 6666666655555443 23456788999999854 34789999999886
No 116
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=81.59 E-value=1.9 Score=31.28 Aligned_cols=28 Identities=11% Similarity=0.293 Sum_probs=23.9
Q ss_pred HHHHHHHHhc---CCCCCcCHHHHHHHHHHH
Q 043888 57 DVKMAFMHFS---QDGLHMKPSEFRRFMVEH 84 (372)
Q Consensus 57 ei~~lF~~ys---~~~~~mt~~~l~~FL~~~ 84 (372)
-|-.+|.+|| ++...|+..+|...|..+
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 5788999999 445799999999999865
No 117
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=73.47 E-value=4.3 Score=40.65 Aligned_cols=39 Identities=15% Similarity=-0.040 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHhcCCc--EEEEEeecCCCCCCceEeeCCcc
Q 043888 168 SDCSEVPIAKALQRGVR--VIELDIWPNSTREDINVLHGRTL 207 (372)
Q Consensus 168 g~SS~e~Yi~AL~~GCR--cIELD~Wdg~~~~~p~V~HG~Tl 207 (372)
-+++..+|..|+..|+. .||+||+--.+ +-++|.|..+|
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L 54 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNL 54 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCccc
Confidence 47889999999999995 69999997655 46789998776
No 118
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=70.89 E-value=9.3 Score=34.36 Aligned_cols=62 Identities=15% Similarity=0.309 Sum_probs=46.3
Q ss_pred HHHHHHHhc----CCCCCcCHHHHHHHHHHHhCC-CCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 58 VKMAFMHFS----QDGLHMKPSEFRRFMVEHQGE-TGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 58 i~~lF~~ys----~~~~~mt~~~l~~FL~~~Q~e-~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
|+.+|..|+ .+...|+-..|.+++++-+=. ..+|..++.-|+.++... ..+.|++++|...|
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k-------~~~~I~f~~F~~aL 67 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK-------GARKITFEQFLEAL 67 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S-------S-SEEEHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC-------CCcccCHHHHHHHH
Confidence 567899994 455789999999999998653 247889999999997632 11349999999988
No 119
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=68.73 E-value=3.2 Score=33.08 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=28.2
Q ss_pred CCchHHHHHHHHhcCCCCCcCHHHHHHHHHHHh
Q 043888 53 EPPLDVKMAFMHFSQDGLHMKPSEFRRFMVEHQ 85 (372)
Q Consensus 53 ~~~~ei~~lF~~ys~~~~~mt~~~l~~FL~~~Q 85 (372)
.+.++|...|...|++++++|.++|++-|.-+|
T Consensus 3 ~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 3 DSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp STCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 467899999999999999999999999876544
No 120
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=68.38 E-value=6.4 Score=25.90 Aligned_cols=27 Identities=30% Similarity=0.523 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCC-CCCcCHHHHHHHHHH
Q 043888 57 DVKMAFMHFSQD-GLHMKPSEFRRFMVE 83 (372)
Q Consensus 57 ei~~lF~~ys~~-~~~mt~~~l~~FL~~ 83 (372)
||+.+|..|-.+ .+.++.++|...|..
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999654 489999999998864
No 121
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=66.71 E-value=6.6 Score=25.51 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCC-CCCcCHHHHHHHHHH
Q 043888 57 DVKMAFMHFSQD-GLHMKPSEFRRFMVE 83 (372)
Q Consensus 57 ei~~lF~~ys~~-~~~mt~~~l~~FL~~ 83 (372)
+++.+|..|-.+ .+.|+.++|+.+|..
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 478899999654 489999999999973
No 122
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=63.41 E-value=20 Score=34.65 Aligned_cols=78 Identities=14% Similarity=0.214 Sum_probs=58.4
Q ss_pred ccccccccccccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccc
Q 043888 32 DGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHIT 110 (372)
Q Consensus 32 ~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~ 110 (372)
.|+++|+.|....+.. ...+.+|..|-.++ +.|+..+|+.=|..-- -.++.+-..-|+.+|.+.
T Consensus 108 ~G~i~f~EF~~Lw~~i--------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~G--y~Lspq~~~~lv~kyd~~----- 172 (221)
T KOG0037|consen 108 SGTIGFKEFKALWKYI--------NQWRNVFRTYDRDRSGTIDSSELRQALTQLG--YRLSPQFYNLLVRKYDRF----- 172 (221)
T ss_pred CCccCHHHHHHHHHHH--------HHHHHHHHhcccCCCCcccHHHHHHHHHHcC--cCCCHHHHHHHHHHhccc-----
Confidence 5778777766555443 47889999997655 7999999999887432 356777788888898732
Q ss_pred cccCCCCCHHHHHHhh
Q 043888 111 RFTRNGLNLDDFFHFL 126 (372)
Q Consensus 111 ~~~~~~Ltld~F~~yL 126 (372)
.+..|.+|.|+..+
T Consensus 173 --~~g~i~FD~FI~cc 186 (221)
T KOG0037|consen 173 --GGGRIDFDDFIQCC 186 (221)
T ss_pred --cCCceeHHHHHHHH
Confidence 24679999999887
No 123
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=60.68 E-value=47 Score=31.93 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=56.6
Q ss_pred CCCCCCCCCHHHHHH----HHhcCCcEEEEEeecCCCCCCceEeeCCc-ccccchHHHHHHHHhhcccccCCCCeEEEeC
Q 043888 163 GNQLSSDCSEVPIAK----ALQRGVRVIELDIWPNSTREDINVLHGRT-LTTPVSLINCLKSIRDNAFVSSPYPVIITLE 237 (372)
Q Consensus 163 G~QL~g~SS~e~Yi~----AL~~GCRcIELD~Wdg~~~~~p~V~HG~T-lTs~i~f~~vl~aIk~~AF~~S~YPVILSLE 237 (372)
+=|+.+. +.+.|.+ +...|+..|||+|..- .+-.|+. +..+-.+.+++++|++.. ..||++-|-
T Consensus 102 i~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~cP------~~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl~ 170 (289)
T cd02810 102 IASVGGS-SKEDYVELARKIERAGAKALELNLSCP------NVGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKLS 170 (289)
T ss_pred EEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCCC------CCCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEeC
Confidence 3445543 4444433 3345999999999631 1122333 334556788999999754 799999998
Q ss_pred CCCCHHHHHHHHHHHHHHhhcccCC
Q 043888 238 DHLTPDLQAKAAEMITQIFGKMLYF 262 (372)
Q Consensus 238 ~Hcs~~qQ~~mA~~l~~ifGd~L~~ 262 (372)
...+.+.=..+|+.+.+.=-|.|..
T Consensus 171 ~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 171 PYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 8888777677777776643355544
No 124
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=60.03 E-value=36 Score=33.18 Aligned_cols=78 Identities=24% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCCCCCCCHHHHHHHHhc----C-CcEEEEEeecCCCCCCceEee-CCc-ccccchHHHHHHHHhhcccccCCCCeEEEe
Q 043888 164 NQLSSDCSEVPIAKALQR----G-VRVIELDIWPNSTREDINVLH-GRT-LTTPVSLINCLKSIRDNAFVSSPYPVIITL 236 (372)
Q Consensus 164 ~QL~g~SS~e~Yi~AL~~----G-CRcIELD~Wdg~~~~~p~V~H-G~T-lTs~i~f~~vl~aIk~~AF~~S~YPVILSL 236 (372)
=|+.| ++.+.|.++.++ | +..|||.|.- + ..-| |.. +..+=.+.+++++|++.. ++||++-|
T Consensus 96 ~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c-P-----~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 164 (301)
T PRK07259 96 ANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC-P-----NVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVKL 164 (301)
T ss_pred EEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC-C-----CCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEEc
Confidence 34544 457788777654 8 9999999962 1 1224 222 233456789999999864 79999988
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 043888 237 EDHLTPDLQAKAAEMITQ 254 (372)
Q Consensus 237 E~Hcs~~qQ~~mA~~l~~ 254 (372)
-. +.+.-..+|+.+.+
T Consensus 165 ~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 165 TP--NVTDIVEIAKAAEE 180 (301)
T ss_pred CC--CchhHHHHHHHHHH
Confidence 64 33344556666554
No 125
>PF09441 Abp2: ARS binding protein 2; InterPro: IPR018562 This DNA-binding protein binds to the autonomously replicating sequence (ARS) binding element. It may play a role in regulating the cell cycle response to stress signals [].
Probab=60.02 E-value=53 Score=30.63 Aligned_cols=14 Identities=29% Similarity=0.871 Sum_probs=12.2
Q ss_pred CCCCHHHHHHhhhcC
Q 043888 115 NGLNLDDFFHFLLFD 129 (372)
Q Consensus 115 ~~Ltld~F~~yL~~S 129 (372)
+.|++|+|+.|| +.
T Consensus 108 ~aMHVDAFFeYl-lg 121 (175)
T PF09441_consen 108 RAMHVDAFFEYL-LG 121 (175)
T ss_pred HHhhHHHHHHHH-hC
Confidence 579999999999 73
No 126
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=60.00 E-value=2.2 Score=28.95 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=13.1
Q ss_pred cCCCCeEEEeCCCCC
Q 043888 227 SSPYPVIITLEDHLT 241 (372)
Q Consensus 227 ~S~YPVILSLE~Hcs 241 (372)
.|.+|=||||||.|=
T Consensus 8 ~sahpdILSLeNrCL 22 (30)
T PF05386_consen 8 VSAHPDILSLENRCL 22 (30)
T ss_pred ccCCcchhhhhhhHH
Confidence 578999999999983
No 127
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=58.11 E-value=16 Score=20.94 Aligned_cols=27 Identities=30% Similarity=0.538 Sum_probs=20.9
Q ss_pred HHHHHHHHhcCCC-CCcCHHHHHHHHHH
Q 043888 57 DVKMAFMHFSQDG-LHMKPSEFRRFMVE 83 (372)
Q Consensus 57 ei~~lF~~ys~~~-~~mt~~~l~~FL~~ 83 (372)
++..+|..+..++ +.++..+|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4677888885543 68999999998864
No 128
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=57.91 E-value=49 Score=30.48 Aligned_cols=61 Identities=13% Similarity=0.251 Sum_probs=47.4
Q ss_pred hHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.++++.|..+..+ .+.|+..+|...|+.-+. ..+...+..|++.+-. +...|++..|+..|
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~--~~s~~ei~~l~~~~d~--------~~~~idf~~Fl~~m 81 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGF--NPSEAEINKLFEEIDA--------GNETVDFPEFLTVM 81 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCC--CCcHHHHHHHHHhccC--------CCCccCHHHHHHHH
Confidence 4677777777654 489999999999996654 4678888888887641 34689999999988
No 129
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=56.62 E-value=23 Score=37.35 Aligned_cols=99 Identities=15% Similarity=0.281 Sum_probs=58.4
Q ss_pred ccchHHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhC
Q 043888 8 GEKNKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQG 86 (372)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~ 86 (372)
..++..+..+|.|+..|.+.. |-.+|.. |.|-+..+ ..++..+|.+.-.+ ++.+.++++.+.|++--
T Consensus 45 ~~~~~~~~~~~l~~~~d~~~d----g~vDy~e---F~~Y~~~~----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g- 112 (463)
T KOG0036|consen 45 HPKPNYEAAKMLFSAMDANRD----GRVDYSE---FKRYLDNK----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG- 112 (463)
T ss_pred CCCCchHHHHHHHHhcccCcC----CcccHHH---HHHHHHHh----HHHHHHHHhhhccccCCccCHHHHHHHHHHhC-
Confidence 335566666666666665543 5555555 44433332 23567777776432 36777777777777643
Q ss_pred CCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 87 ETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 87 e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
. ..+.+.++.|++..-+. +...+++++|..|+
T Consensus 113 i-~l~de~~~k~~e~~d~~-------g~~~I~~~e~rd~~ 144 (463)
T KOG0036|consen 113 I-QLSDEKAAKFFEHMDKD-------GKATIDLEEWRDHL 144 (463)
T ss_pred C-ccCHHHHHHHHHHhccC-------CCeeeccHHHHhhh
Confidence 2 35677777777765421 22357777887776
No 130
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=56.53 E-value=46 Score=31.16 Aligned_cols=87 Identities=15% Similarity=0.272 Sum_probs=54.8
Q ss_pred cccccccccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCCCC--HHHHHHHHHHHhhccccccc
Q 043888 35 YHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETGCT--LSRAEEIVNNIISSRHHITR 111 (372)
Q Consensus 35 y~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~~t--~~~a~~Ii~~~~~~~~~~~~ 111 (372)
.+|+.|.-..--|..+ +..+.-++.+|.-|--++ +.++.++|...|+.-=++. .+ .+..+.|+++.-.+. ..
T Consensus 84 v~F~~Fv~~ls~f~~~-~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~-~~~~~e~~~~i~d~t~~e~---D~ 158 (187)
T KOG0034|consen 84 VDFEEFVRLLSVFSPK-ASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGEN-DDMSDEQLEDIVDKTFEEA---DT 158 (187)
T ss_pred cCHHHHHHHHhhhcCC-ccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccC-CcchHHHHHHHHHHHHHHh---CC
Confidence 5566643333333322 122235778999996554 7899999999998776653 23 566666766653221 11
Q ss_pred ccCCCCCHHHHHHhh
Q 043888 112 FTRNGLNLDDFFHFL 126 (372)
Q Consensus 112 ~~~~~Ltld~F~~yL 126 (372)
-..+.|++++|.+++
T Consensus 159 d~DG~IsfeEf~~~v 173 (187)
T KOG0034|consen 159 DGDGKISFEEFCKVV 173 (187)
T ss_pred CCCCcCcHHHHHHHH
Confidence 234789999999999
No 131
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=52.59 E-value=26 Score=28.30 Aligned_cols=66 Identities=18% Similarity=0.034 Sum_probs=45.1
Q ss_pred HHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhC
Q 043888 12 KEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQG 86 (372)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~ 86 (372)
..+.+..| +..|.+. .|..++..+..+.|... .+.++|..+|..+..+ .+.|+.++|..++.....
T Consensus 9 ~~~l~~~F-~~~D~d~----~G~Is~~el~~~l~~~~----~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 9 KAKYEQIF-RSLDKNQ----DGTVTGAQAKPILLKSG----LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred HHHHHHHH-HHhCCCC----CCeEeHHHHHHHHHHcC----CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 45677776 6666554 36666676655555432 4567899999988654 478999999888876543
No 132
>PLN02964 phosphatidylserine decarboxylase
Probab=52.11 E-value=15 Score=40.68 Aligned_cols=63 Identities=11% Similarity=0.116 Sum_probs=48.3
Q ss_pred HHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHHH
Q 043888 15 TDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEH 84 (372)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~ 84 (372)
++.|| ...|++.+ |+.+|..|..+...+. ...+.++|..+|..|-.+ .+.++.++|.+.|...
T Consensus 181 i~~mf-~~~D~Dgd----G~IdfdEFl~lL~~lg--~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 181 ARRIL-AIVDYDED----GQLSFSEFSDLIKAFG--NLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHH-HHhCCCCC----CeEcHHHHHHHHHHhc--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 78886 77777664 8888888776666543 335677899999999654 4799999999999875
No 133
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=50.88 E-value=70 Score=27.84 Aligned_cols=62 Identities=15% Similarity=0.295 Sum_probs=50.0
Q ss_pred hHHHHHHHHhcC-CCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 56 LDVKMAFMHFSQ-DGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 56 ~ei~~lF~~ys~-~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.++..+|..|-. +.+.++..+|...|+.-... .|.+....+++.+... ..+.++++.|...|
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d-------g~g~I~~~eF~~l~ 70 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD-------GDGTIDFEEFLDLM 70 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC-------CCCeEcHHHHHHHH
Confidence 578899999944 45899999999999987654 6788889999887532 34679999999988
No 134
>PLN02591 tryptophan synthase
Probab=47.90 E-value=15 Score=35.81 Aligned_cols=87 Identities=20% Similarity=0.214 Sum_probs=51.6
Q ss_pred HHHHHH-hcCCcEEEEEeec-CCCCCCceEe--eCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHH---H
Q 043888 174 PIAKAL-QRGVRVIELDIWP-NSTREDINVL--HGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQ---A 246 (372)
Q Consensus 174 ~Yi~AL-~~GCRcIELD~Wd-g~~~~~p~V~--HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ---~ 246 (372)
.++++| ..||-.|||.+== .+--|+|+|- |-+.|...+++.+|++.+++... ...-||||- -..++=.| .
T Consensus 20 ~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r~-~~~~p~ilm--~Y~N~i~~~G~~ 96 (250)
T PLN02591 20 EALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVAP-QLSCPIVLF--TYYNPILKRGID 96 (250)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHhc-CCCCCEEEE--ecccHHHHhHHH
Confidence 445555 5799999997731 1222345444 33567788899999999999773 366796632 23344334 3
Q ss_pred HHHHHHHHHhhcccCCC
Q 043888 247 KAAEMITQIFGKMLYFP 263 (372)
Q Consensus 247 ~mA~~l~~ifGd~L~~p 263 (372)
+..+.+++.=-+-|+.|
T Consensus 97 ~F~~~~~~aGv~Gviip 113 (250)
T PLN02591 97 KFMATIKEAGVHGLVVP 113 (250)
T ss_pred HHHHHHHHcCCCEEEeC
Confidence 33444444333445555
No 135
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=45.99 E-value=22 Score=25.38 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=25.8
Q ss_pred CCchHHHHHHHHhcCC-CCCcCHHHHHHHHHH
Q 043888 53 EPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVE 83 (372)
Q Consensus 53 ~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~ 83 (372)
.++.++..||..+-.+ .+.++.++|..++..
T Consensus 22 ~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 22 LSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 5678999999999544 489999999999864
No 136
>PTZ00452 actin; Provisional
Probab=42.16 E-value=31 Score=34.99 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=38.8
Q ss_pred chHHHHHHHHhhccccc------CCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 211 VSLINCLKSIRDNAFVS------SPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 211 i~f~~vl~aIk~~AF~~------S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
|.=.|.++.|=+|+|.. +++||+++=-...+..++.+||++|=|.|+-
T Consensus 76 I~dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 76 INSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred EcCHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 33467777888888742 5799999966777899999999999999996
No 137
>PTZ00466 actin-like protein; Provisional
Probab=41.57 E-value=34 Score=34.87 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcccc-----cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 213 LINCLKSIRDNAFV-----SSPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 213 f~~vl~aIk~~AF~-----~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
=.+.++.|=+|+|. .+.+||+|+--.+++..++++|+++|=|.||-
T Consensus 85 dwd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 85 NWNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred CHHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 35677777777773 35899999987888899999999999999996
No 138
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=40.27 E-value=44 Score=24.15 Aligned_cols=55 Identities=16% Similarity=0.002 Sum_probs=35.4
Q ss_pred hcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHH
Q 043888 21 QNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVE 83 (372)
Q Consensus 21 ~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~ 83 (372)
+-.|++.. |..+...+..+.+... .+.+++..+|..+..+ .+.++.++|...+..
T Consensus 6 ~~~D~~~~----G~i~~~el~~~l~~~g----~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 6 RSLDPDGD----GLISGDEARPFLGKSG----LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HHhCCCCC----CcCcHHHHHHHHHHcC----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 66666553 5555455544444432 2677899999988654 378998888776653
No 139
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=39.48 E-value=1.1e+02 Score=28.53 Aligned_cols=95 Identities=18% Similarity=0.348 Sum_probs=64.9
Q ss_pred HHHHHhhhhhcCccccCCCCcccccccccc-ccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCC
Q 043888 12 KEKTDQMQSQNGDVAENSSNDGSYHYRMFN-FFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETG 89 (372)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~-~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~ 89 (372)
..-++-|+ +||. |.-||-+|. -|--|+.- ..|.+.|...|.-|-..+ +.+..+.|+..|.. ||+ .
T Consensus 67 d~elDaM~-~Ea~--------gPINft~FLTmfGekL~g--tdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt-~gD-r 133 (171)
T KOG0031|consen 67 DEELDAMM-KEAP--------GPINFTVFLTMFGEKLNG--TDPEEVILNAFKTFDDEGSGKIDEDYLRELLTT-MGD-R 133 (171)
T ss_pred HHHHHHHH-HhCC--------CCeeHHHHHHHHHHHhcC--CCHHHHHHHHHHhcCccCCCccCHHHHHHHHHH-hcc-c
Confidence 44456665 4443 555566653 34444443 456677888888886543 89999999999998 887 5
Q ss_pred CCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 90 CTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 90 ~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.+.+++.+++..+-. -..+.+....|.+-|
T Consensus 134 ~~~eEV~~m~r~~p~-------d~~G~~dy~~~~~~i 163 (171)
T KOG0031|consen 134 FTDEEVDEMYREAPI-------DKKGNFDYKAFTYII 163 (171)
T ss_pred CCHHHHHHHHHhCCc-------ccCCceeHHHHHHHH
Confidence 789999998877532 123567888888776
No 140
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=38.18 E-value=43 Score=26.81 Aligned_cols=72 Identities=8% Similarity=0.077 Sum_probs=44.3
Q ss_pred hhccchHHHHHhhhhhcCc-cccCCCCcc-ccccccccccccc-cc--cCCCCCchHHHHHHHHhcCCC-CCcCHHHHHH
Q 043888 6 TQGEKNKEKTDQMQSQNGD-VAENSSNDG-SYHYRMFNFFNRK-FK--IREPEPPLDVKMAFMHFSQDG-LHMKPSEFRR 79 (372)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-ty~Y~~~~~f~r~-~~--~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~ 79 (372)
++-|+.-+.++..| +-.| .+.+ | ..+...+..+.+. +. +....+..+|..+|..+-.++ +.|+.++|..
T Consensus 2 ~~~e~~~~~l~~~F-~~fDd~dg~----G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~ 76 (92)
T cd05025 2 SELETAMETLINVF-HAHSGKEGD----KYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVV 76 (92)
T ss_pred ChHHHHHHHHHHHH-HHHhcccCC----CCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence 34466667788886 6665 6553 4 3444444333332 11 122345678999999986543 6899888887
Q ss_pred HHH
Q 043888 80 FMV 82 (372)
Q Consensus 80 FL~ 82 (372)
++.
T Consensus 77 l~~ 79 (92)
T cd05025 77 LVA 79 (92)
T ss_pred HHH
Confidence 765
No 141
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=37.99 E-value=1.6e+02 Score=25.37 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=42.2
Q ss_pred hHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhhhc
Q 043888 56 LDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFLLF 128 (372)
Q Consensus 56 ~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL~~ 128 (372)
..|.-.|..+-.+ .+.++.++|..++ .. .....+..+|+.+-. ...+.||++.|...| .
T Consensus 48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l~---~~e~~~~~f~~~~D~-------n~Dg~IS~~Ef~~cl-~ 107 (116)
T cd00252 48 DPVGWMFNQLDGNYDGKLSHHELAPIR---LD---PNEHCIKPFFESCDL-------DKDGSISLDEWCYCF-I 107 (116)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHH---cc---chHHHHHHHHHHHCC-------CCCCCCCHHHHHHHH-h
Confidence 5788899999544 4899999999887 11 223445667776641 134689999999988 5
No 142
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=37.68 E-value=35 Score=21.53 Aligned_cols=24 Identities=33% Similarity=0.549 Sum_probs=18.7
Q ss_pred HHHHHHHhcCC-CCCcCHHHHHHHH
Q 043888 58 VKMAFMHFSQD-GLHMKPSEFRRFM 81 (372)
Q Consensus 58 i~~lF~~ys~~-~~~mt~~~l~~FL 81 (372)
|+.+|..+-.+ .+.++.++|.+|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 56788888444 4899999999975
No 143
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=37.41 E-value=48 Score=26.05 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=44.5
Q ss_pred cchHHHHHhhhhhcCccccCCCCccccccccccccccc-cc--cCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHHH
Q 043888 9 EKNKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRK-FK--IREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMVE 83 (372)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~-~~--~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~ 83 (372)
|+..+.++..| ...|+.++. .|..++..+.-+.+. +. .......++|..+|..+..+ .+.|+.++|...+..
T Consensus 4 ~~~~~~l~~~F-~~~D~~~~~--~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVF-HKYSGKEGD--KDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHH-HHHhhccCC--CCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 44556788886 778883111 255655665444433 21 11113467899999998654 378999999887764
No 144
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=37.33 E-value=56 Score=34.87 Aligned_cols=80 Identities=14% Similarity=0.322 Sum_probs=48.6
Q ss_pred ccccccccccccccccccCCCCCchHHHHH-HHHhcCCC-CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhccccc
Q 043888 32 DGSYHYRMFNFFNRKFKIREPEPPLDVKMA-FMHFSQDG-LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHI 109 (372)
Q Consensus 32 ~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~l-F~~ys~~~-~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~ 109 (372)
.+++.|+.|.-|.+.+. .||.++ |.+|..+. +.|+..+|...|-..-+.. .+.-.....++...-.+
T Consensus 300 ~~kLs~deF~~F~e~Lq-------~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n---~~~k~~~lkrvk~kf~~- 368 (489)
T KOG2643|consen 300 NGKLSIDEFLKFQENLQ-------EEILELEFERFDKGDSGAISEVDFAELLLAYAGVN---SKKKHKYLKRVKEKFKD- 368 (489)
T ss_pred CccccHHHHHHHHHHHH-------HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccc---hHhHHHHHHHHHHhccC-
Confidence 46777788877777664 466666 88887765 5899999888887655432 22222223333211111
Q ss_pred ccccCCCCCHHHHHHh
Q 043888 110 TRFTRNGLNLDDFFHF 125 (372)
Q Consensus 110 ~~~~~~~Ltld~F~~y 125 (372)
...+||+++|..|
T Consensus 369 ---~~~gISl~Ef~~F 381 (489)
T KOG2643|consen 369 ---DGKGISLQEFKAF 381 (489)
T ss_pred ---CCCCcCHHHHHHH
Confidence 1468998877654
No 145
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=37.15 E-value=1.1e+02 Score=28.76 Aligned_cols=60 Identities=13% Similarity=0.300 Sum_probs=40.1
Q ss_pred chHHHHHHHHh---cCC--CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 55 PLDVKMAFMHF---SQD--GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 55 ~~ei~~lF~~y---s~~--~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..||..|+.+| +.+ .+.|+.++|..-. ..+.. --+.+||+.+.... .+..+++.+|.+.|
T Consensus 29 ~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~N-----p~~~rI~~~f~~~~------~~~~v~F~~Fv~~l 93 (187)
T KOG0034|consen 29 ANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALN-----PLADRIIDRFDTDG------NGDPVDFEEFVRLL 93 (187)
T ss_pred HHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcC-----cHHHHHHHHHhccC------CCCccCHHHHHHHH
Confidence 35766665554 433 4899999998887 33322 24588999887321 11229999999998
No 146
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=36.75 E-value=38 Score=33.68 Aligned_cols=45 Identities=29% Similarity=0.380 Sum_probs=33.5
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 214 INCLKSIRDNAFV------SSPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 214 ~~vl~aIk~~AF~------~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
.+.++.|=+|+|. .+.+||||+.-.+++.....+|+++|-+.||-
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 4555666666554 46899999999999999999999999999985
No 147
>PTZ00281 actin; Provisional
Probab=36.74 E-value=39 Score=34.15 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=38.4
Q ss_pred hHHHHHHHHhhcccc------cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 212 SLINCLKSIRDNAFV------SSPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 212 ~f~~vl~aIk~~AF~------~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
.=.+.++.|=+|+|. .+++||+|+--.+++..++.+|+++|=|.|+-
T Consensus 78 ~dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~v 130 (376)
T PTZ00281 78 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130 (376)
T ss_pred cCHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCC
Confidence 346777777778873 25799999977778899999999999999986
No 148
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=36.36 E-value=51 Score=28.46 Aligned_cols=60 Identities=13% Similarity=0.010 Sum_probs=41.4
Q ss_pred hHHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHH
Q 043888 11 NKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFM 81 (372)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL 81 (372)
-+.+++-|| ...|++.+ |.++.....-+. .......+..+|..+-.+ .+.||.++|..+|
T Consensus 46 ~~~~l~w~F-~~lD~d~D----G~Ls~~EL~~~~------l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 46 CKDPVGWMF-NQLDGNYD----GKLSHHELAPIR------LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHH-HHHCCCCC----CcCCHHHHHHHH------ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 456788886 77788853 666556544332 112245678888888544 4799999999999
No 149
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=36.02 E-value=31 Score=33.75 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=50.5
Q ss_pred HHHHHH-hcCCcEEEEEee-cCCCCCCceEe--eCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHHH---
Q 043888 174 PIAKAL-QRGVRVIELDIW-PNSTREDINVL--HGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQA--- 246 (372)
Q Consensus 174 ~Yi~AL-~~GCRcIELD~W-dg~~~~~p~V~--HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ~--- 246 (372)
.++++| ..||-.|||-+= ..|--|+|+|- |-+.|-..+++.+|++.+++-. ....-|+||- -..++=.|.
T Consensus 33 ~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r-~~~~~p~vlm--~Y~N~i~~~G~e 109 (263)
T CHL00200 33 KALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVN-GEIKAPIVIF--TYYNPVLHYGIN 109 (263)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEE--ecccHHHHhCHH
Confidence 455555 578999999773 22222445444 3345677788899999988876 3366796632 334444442
Q ss_pred HHHHHHHHHhhcccCCC
Q 043888 247 KAAEMITQIFGKMLYFP 263 (372)
Q Consensus 247 ~mA~~l~~ifGd~L~~p 263 (372)
+..+-+.+.=-|-|..|
T Consensus 110 ~F~~~~~~aGvdgviip 126 (263)
T CHL00200 110 KFIKKISQAGVKGLIIP 126 (263)
T ss_pred HHHHHHHHcCCeEEEec
Confidence 33333333323445555
No 150
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=35.11 E-value=84 Score=31.17 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=37.1
Q ss_pred CHHHHHHHHhcCCcEEEEEe--ecCCCCCCceEeeCCcccc------cchHHHHHHHHhhcc
Q 043888 171 SEVPIAKALQRGVRVIELDI--WPNSTREDINVLHGRTLTT------PVSLINCLKSIRDNA 224 (372)
Q Consensus 171 S~e~Yi~AL~~GCRcIELD~--Wdg~~~~~p~V~HG~TlTs------~i~f~~vl~aIk~~A 224 (372)
+.+++-.||..|+-.||+|+ |.+. .+--.+||-..+. ...|.+.++.+++..
T Consensus 9 ~~~~v~~~l~~GANaiE~Dv~f~~~~--~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~t 68 (265)
T cd08576 9 DLEGVDDALDHGANAIEIDVTFWSNG--TGWWADHDVPCDCFRGCTAREMFDEILDYRRNGT 68 (265)
T ss_pred cHHHHHHHHHcCCCceeEEEEEccCC--cEEEeeCCCccccccCCcHHHHHHHHHHHHHhcC
Confidence 47888999999999999999 4433 3446899975544 345666666666653
No 151
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=35.03 E-value=21 Score=35.44 Aligned_cols=90 Identities=17% Similarity=0.164 Sum_probs=54.0
Q ss_pred HHHH-HhcCCcEEEEEeec-CCCCCCceEe--eCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCCC-CHHHHHHHH
Q 043888 175 IAKA-LQRGVRVIELDIWP-NSTREDINVL--HGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHL-TPDLQAKAA 249 (372)
Q Consensus 175 Yi~A-L~~GCRcIELD~Wd-g~~~~~p~V~--HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hc-s~~qQ~~mA 249 (372)
++++ ...||-.|||-+=- .+--|+|.|- |=+.|...+++.++++.+++.-=.....|+||-.=-.+ =...=.+..
T Consensus 36 ~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~t~~~~lel~~~~r~~~~~~Pivlm~Y~Npi~~~Gie~F~ 115 (265)
T COG0159 36 IIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGVTLEDTLELVEEIRAKGVKVPIVLMTYYNPIFNYGIEKFL 115 (265)
T ss_pred HHHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCCCCEEEEEeccHHHHhhHHHHH
Confidence 3444 56789999997631 1111233333 44568888999999999998765557889887643222 122223344
Q ss_pred HHHHHHhhcccCCCC
Q 043888 250 EMITQIFGKMLYFPE 264 (372)
Q Consensus 250 ~~l~~ifGd~L~~p~ 264 (372)
+.+++.=-|-|++|.
T Consensus 116 ~~~~~~GvdGlivpD 130 (265)
T COG0159 116 RRAKEAGVDGLLVPD 130 (265)
T ss_pred HHHHHcCCCEEEeCC
Confidence 455555555566653
No 152
>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. The best studied type I enzyme is from Escherichia coli (gene aroD) and related bacteria where it is a homodimeric protein. In fungi, dehydroquinase is part of a multifunctional enzyme which catalyzes five consecutive steps in the shikimate pathway. A histidine [] is involved in the catalytic mechanism.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 2O7Q_A 2GPT_A 2O7S_A 1SFL_A 2OCZ_A 2OX1_C 1GQN_A 1QFE_B 1L9W_D 3L9C_A ....
Probab=34.39 E-value=96 Score=28.82 Aligned_cols=58 Identities=19% Similarity=0.303 Sum_probs=35.0
Q ss_pred hcCCcEEE--EEeecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCC-------CCHHHHHHHHH
Q 043888 180 QRGVRVIE--LDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDH-------LTPDLQAKAAE 250 (372)
Q Consensus 180 ~~GCRcIE--LD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~H-------cs~~qQ~~mA~ 250 (372)
..||-+|| +|.|++. ..-.+.+.+..|+.+. ..|||+|+... .+.+....+-+
T Consensus 21 ~~~~D~vElRlD~l~~~--------------~~~~~~~~l~~lr~~~----~~piI~T~R~~~eGG~~~~~~~~~~~ll~ 82 (224)
T PF01487_consen 21 SSGADAVELRLDYLEND--------------SAEDISEQLAELRRSL----DLPIIFTVRTKEEGGRFQGSEEEYLELLE 82 (224)
T ss_dssp HTTTSEEEEEGGGSTTT--------------SHHHHHHHHHHHHHHC----TSEEEEE--BGGGTSSBSS-HHHHHHHHH
T ss_pred hcCCCEEEEEecccccc--------------ChHHHHHHHHHHHHhC----CCCEEEEecccccCCCCcCCHHHHHHHHH
Confidence 34999999 5788751 1233456666666654 89999999953 46666665544
Q ss_pred HHHHH
Q 043888 251 MITQI 255 (372)
Q Consensus 251 ~l~~i 255 (372)
.+.+.
T Consensus 83 ~~~~~ 87 (224)
T PF01487_consen 83 RAIRL 87 (224)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44433
No 153
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=33.76 E-value=40 Score=33.40 Aligned_cols=64 Identities=23% Similarity=0.303 Sum_probs=46.8
Q ss_pred CCCCccccccccCCc--ccccCCCCCCCCCHHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcc------cccchHHH
Q 043888 144 MTAPLSNYFIYTGHN--SYLTGNQLSSDCSEVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTL------TTPVSLIN 215 (372)
Q Consensus 144 Mt~PLShYFIsSSHN--TYLtG~QL~g~SS~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~Tl------Ts~i~f~~ 215 (372)
.+.=++.|||-|.|| .| .+.+.+.|+-|- +|=|= +|..||-... .-.+++.+
T Consensus 166 ~d~VvT~FFIDTA~Ni~~Y-----------i~tI~~lLkpgG------~WIN~---GPLlyh~~~~~~~~~~sveLs~eE 225 (270)
T PF07942_consen 166 FDVVVTCFFIDTAENIIEY-----------IETIEHLLKPGG------YWINF---GPLLYHFEPMSIPNEMSVELSLEE 225 (270)
T ss_pred ccEEEEEEEeechHHHHHH-----------HHHHHHHhccCC------EEEec---CCccccCCCCCCCCCcccCCCHHH
Confidence 345578899999998 34 345556777665 77653 4789997655 35688999
Q ss_pred HHHHHhhccccc
Q 043888 216 CLKSIRDNAFVS 227 (372)
Q Consensus 216 vl~aIk~~AF~~ 227 (372)
++.+|+..+|.-
T Consensus 226 i~~l~~~~GF~~ 237 (270)
T PF07942_consen 226 IKELIEKLGFEI 237 (270)
T ss_pred HHHHHHHCCCEE
Confidence 999999999963
No 154
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=33.75 E-value=63 Score=30.54 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=57.4
Q ss_pred HhhhhhcCccccCCCCccccccccccccccccccCCCCCch-HHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCC---
Q 043888 16 DQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPL-DVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGC--- 90 (372)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~-ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~--- 90 (372)
+.+| ..-|++.+ |+-+|.. |++.+.+....+.. =+.-.|.-|-.+ .++++.+++...+.........
T Consensus 67 ~~vF-~~fD~~~d----g~i~F~E---fi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~ 138 (193)
T KOG0044|consen 67 ELVF-RTFDKNKD----GTIDFLE---FICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKAL 138 (193)
T ss_pred HHHH-HHhcccCC----CCcCHHH---HHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccC
Confidence 3443 55555554 7777777 44444333222222 244568888654 4799999999999877544322
Q ss_pred ------CHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 91 ------TLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 91 ------t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
-.+.+..|+.++. ....+.||+++|.+..
T Consensus 139 ~~~~~~~~~~v~~if~k~D-------~n~Dg~lT~eef~~~~ 173 (193)
T KOG0044|consen 139 PEDEETPEERVDKIFSKMD-------KNKDGKLTLEEFIEGC 173 (193)
T ss_pred CcccccHHHHHHHHHHHcC-------CCCCCcccHHHHHHHh
Confidence 1234455555543 1234689999999887
No 155
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=33.06 E-value=50 Score=32.77 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=35.5
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 214 INCLKSIRDNAFV------SSPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 214 ~~vl~aIk~~AF~------~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
.++++.|=+|.|. .+.+||+|+.-...+..++.+++++|-+.||-
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 4666666666664 35799999977677799999999999999984
No 156
>PTZ00004 actin-2; Provisional
Probab=32.07 E-value=59 Score=32.83 Aligned_cols=46 Identities=13% Similarity=0.169 Sum_probs=35.5
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcc
Q 043888 214 INCLKSIRDNAFV------SSPYPVIITLEDHLTPDLQAKAAEMITQIFGKM 259 (372)
Q Consensus 214 ~~vl~aIk~~AF~------~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~ 259 (372)
.+.++.|=+|+|. .+.+||+|+--.+.+..++.+|+++|=|.||--
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 4556666666653 367999999666777888889999999999963
No 157
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=31.60 E-value=1.2e+02 Score=30.00 Aligned_cols=85 Identities=21% Similarity=0.290 Sum_probs=61.5
Q ss_pred cCCcccccCCCCCCCCCHH-HHHHHH-hcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCe
Q 043888 155 TGHNSYLTGNQLSSDCSEV-PIAKAL-QRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPV 232 (372)
Q Consensus 155 SSHNTYLtG~QL~g~SS~e-~Yi~AL-~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPV 232 (372)
..+|.-|.|.-=+|+||.. ++...+ ..|+|+||++=-+ + ..+.+++..|+ ..+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~------L-----------~~l~~l~~~l~-----~~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKED------L-----------GDLPELLDLLR-----DRPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHH------h-----------ccHHHHHHHHh-----cCCCCE
Confidence 5678889999999998863 444333 4699999994322 2 23677888887 357888
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHhhcccCC
Q 043888 233 IITLEDHLTPDLQAKAAEMITQIFGKMLYF 262 (372)
Q Consensus 233 ILSLE~Hcs~~qQ~~mA~~l~~ifGd~L~~ 262 (372)
||=+.+ +|.+....-.+.|+.++---|-.
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgle~ 137 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGLEA 137 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCcccc
Confidence 888876 88887777778889888765543
No 158
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=31.01 E-value=97 Score=23.51 Aligned_cols=46 Identities=15% Similarity=0.151 Sum_probs=32.5
Q ss_pred cCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 72 MKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 72 mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
|+..++.+||+...= .++.+.|..|+++...+ +.+.|..+.|..|.
T Consensus 2 msf~Evk~lLk~~NI--~~~~~yA~~LFq~~D~s-------~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI--EMDDEYARQLFQECDKS-------QSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-SS-------SSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc--CcCHHHHHHHHHHhccc-------CCCCccHHHHHHHH
Confidence 788999999997654 36789999999887532 23668888888775
No 159
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=30.86 E-value=1.2e+02 Score=29.69 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=39.8
Q ss_pred CCHHHHHHHHhcCCcEEEEEeecC-----CCCCCceEeeCCcccccchHHHHHHHHh
Q 043888 170 CSEVPIAKALQRGVRVIELDIWPN-----STREDINVLHGRTLTTPVSLINCLKSIR 221 (372)
Q Consensus 170 SS~e~Yi~AL~~GCRcIELD~Wdg-----~~~~~p~V~HG~TlTs~i~f~~vl~aIk 221 (372)
-|-.....||....-+||.||==+ ...+.|++.|=...++-++|+++|..|.
T Consensus 12 Nsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~ 68 (244)
T PF10223_consen 12 NSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVL 68 (244)
T ss_pred CCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHh
Confidence 455667789988889999999532 3334577778655679999999999987
No 160
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=30.83 E-value=51 Score=26.54 Aligned_cols=74 Identities=12% Similarity=0.163 Sum_probs=43.9
Q ss_pred hhccchHHHHHhhhhhcCccccCCCCcccccccccccccc-ccc--cCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHH
Q 043888 6 TQGEKNKEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNR-KFK--IREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFM 81 (372)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r-~~~--~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL 81 (372)
|+.|+.=..+-++| ++.++.... .+..+...+.-+.+ .+. .+......+|..+|..+-.+ .+.++.++|..++
T Consensus 1 ~~~e~~i~~~~~~f-~~y~~~~~~--~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~ 77 (88)
T cd05030 1 TELEKAIETIINVF-HQYSVRKGH--PDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLV 77 (88)
T ss_pred ChHHHHHHHHHHHH-HHHhccCCC--cccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 45678888899997 665555322 34443344433332 221 11122367888898888543 3688888887776
Q ss_pred H
Q 043888 82 V 82 (372)
Q Consensus 82 ~ 82 (372)
.
T Consensus 78 ~ 78 (88)
T cd05030 78 I 78 (88)
T ss_pred H
Confidence 5
No 161
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=30.45 E-value=42 Score=32.75 Aligned_cols=87 Identities=23% Similarity=0.342 Sum_probs=48.6
Q ss_pred HHHHH-hcCCcEEEEEe-ecCCCCCCceEeeC--CcccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHHHH---HH
Q 043888 175 IAKAL-QRGVRVIELDI-WPNSTREDINVLHG--RTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPDLQ---AK 247 (372)
Q Consensus 175 Yi~AL-~~GCRcIELD~-Wdg~~~~~p~V~HG--~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~qQ---~~ 247 (372)
++.+| ..||-.|||-+ +..|--|+|+|-+- +.|-..+++.++++.+++-.=....-|+||-. ..++=.| .+
T Consensus 31 ~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~~AL~~G~~~~~~~~~~~~~r~~~~~~p~vlm~--Y~N~i~~~G~e~ 108 (258)
T PRK13111 31 IIKALVEAGADIIELGIPFSDPVADGPVIQAASLRALAAGVTLADVFELVREIREKDPTIPIVLMT--YYNPIFQYGVER 108 (258)
T ss_pred HHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe--cccHHhhcCHHH
Confidence 34444 67999999977 22232345555543 34566778888988888855122456866432 2333233 24
Q ss_pred HHHHHHHHhhcccCCC
Q 043888 248 AAEMITQIFGKMLYFP 263 (372)
Q Consensus 248 mA~~l~~ifGd~L~~p 263 (372)
..+.+++.=-+-++.|
T Consensus 109 f~~~~~~aGvdGviip 124 (258)
T PRK13111 109 FAADAAEAGVDGLIIP 124 (258)
T ss_pred HHHHHHHcCCcEEEEC
Confidence 4555555522334444
No 162
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=30.18 E-value=2.7e+02 Score=26.93 Aligned_cols=77 Identities=21% Similarity=0.292 Sum_probs=46.9
Q ss_pred CCCCCCCHHHHHHHHh----cCCcEEEEEeecCCCCCCceEee-CCc-ccccchHHHHHHHHhhcccccCCCCeEEEeCC
Q 043888 165 QLSSDCSEVPIAKALQ----RGVRVIELDIWPNSTREDINVLH-GRT-LTTPVSLINCLKSIRDNAFVSSPYPVIITLED 238 (372)
Q Consensus 165 QL~g~SS~e~Yi~AL~----~GCRcIELD~Wdg~~~~~p~V~H-G~T-lTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~ 238 (372)
||.| ++.+.|.++.+ .|+..|||.+.- |..-+ |.. +.++-.+.+++++|++.. ..||++-|-.
T Consensus 95 si~g-~~~~~~~~~a~~~~~~G~d~iElN~~c------P~~~~~g~~~~~~~~~~~eiv~~vr~~~----~~Pv~vKl~~ 163 (296)
T cd04740 95 SIAG-STVEEFVEVAEKLADAGADAIELNISC------PNVKGGGMAFGTDPEAVAEIVKAVKKAT----DVPVIVKLTP 163 (296)
T ss_pred EEec-CCHHHHHHHHHHHHHcCCCEEEEECCC------CCCCCCcccccCCHHHHHHHHHHHHhcc----CCCEEEEeCC
Confidence 4444 34666665554 499999999873 11112 222 245566789999999864 7999988753
Q ss_pred CCCHHHHHHHHHHHHH
Q 043888 239 HLTPDLQAKAAEMITQ 254 (372)
Q Consensus 239 Hcs~~qQ~~mA~~l~~ 254 (372)
.. +.-..+|+.+.+
T Consensus 164 ~~--~~~~~~a~~~~~ 177 (296)
T cd04740 164 NV--TDIVEIARAAEE 177 (296)
T ss_pred Cc--hhHHHHHHHHHH
Confidence 32 233455555544
No 163
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=29.96 E-value=68 Score=29.83 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=17.8
Q ss_pred ccccccccccccccCCCCCchHHHHHHHHhcC
Q 043888 36 HYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQ 67 (372)
Q Consensus 36 ~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~ 67 (372)
+|..|-+|+|+ ||-.++.+|-.
T Consensus 15 ~YQDCTFFtrK----------dIlrl~~Rf~~ 36 (189)
T KOG0038|consen 15 EYQDCTFFTRK----------DILRLHKRFYE 36 (189)
T ss_pred hhcccccccHH----------HHHHHHHHHHH
Confidence 47899999874 89999888754
No 164
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=29.74 E-value=44 Score=24.73 Aligned_cols=29 Identities=24% Similarity=0.205 Sum_probs=21.3
Q ss_pred cCCcccccCCCCCCCCCHHHHHHHHhcCCcEEE
Q 043888 155 TGHNSYLTGNQLSSDCSEVPIAKALQRGVRVIE 187 (372)
Q Consensus 155 SSHNTYLtG~QL~g~SS~e~Yi~AL~~GCRcIE 187 (372)
+.++|+|.. .....+-|..|...|+.||-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 458888887 45667889999999998874
No 165
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=29.03 E-value=29 Score=27.20 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=35.0
Q ss_pred cccccccccccccccccCCCCCchHHHHHHHHhcC-----CCCCcCHHHHHHHHHHHh
Q 043888 33 GSYHYRMFNFFNRKFKIREPEPPLDVKMAFMHFSQ-----DGLHMKPSEFRRFMVEHQ 85 (372)
Q Consensus 33 ~ty~Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~-----~~~~mt~~~l~~FL~~~Q 85 (372)
++.+...+.-|.+.--........++..|+.+|.. .+..||.+.|.+||....
T Consensus 14 ~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 14 EYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp SSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 44444555555553221112367899999999953 357999999999997543
No 166
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=28.69 E-value=1e+02 Score=29.19 Aligned_cols=69 Identities=13% Similarity=0.160 Sum_probs=45.0
Q ss_pred CcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhcccccCCCCeEEEeCCC---CCHHHHHHHHHHHHHHhhcc
Q 043888 183 VRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDH---LTPDLQAKAAEMITQIFGKM 259 (372)
Q Consensus 183 CRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~H---cs~~qQ~~mA~~l~~ifGd~ 259 (372)
+=++-||+++| -.++++||.-.+.+++.+.++...+..+.. =|+.++..- ..++. .+.+.+.+.++--
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~~~---ii~tdi~~dGt~~G~d~--~~~~~l~~~~~~~ 193 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGAGE---IILTDIDRDGTMQGPDL--ELLKQLAEAVNIP 193 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-SE---EEEEETTTTTTSSS--H--HHHHHHHHHHSSE
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCCcE---EEEeeccccCCcCCCCH--HHHHHHHHHcCCC
Confidence 45677999985 247999999999999999999999988642 155556544 22454 3344455555433
Q ss_pred c
Q 043888 260 L 260 (372)
Q Consensus 260 L 260 (372)
+
T Consensus 194 v 194 (229)
T PF00977_consen 194 V 194 (229)
T ss_dssp E
T ss_pred E
Confidence 3
No 167
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=28.39 E-value=1.5e+02 Score=32.55 Aligned_cols=67 Identities=15% Similarity=0.316 Sum_probs=42.1
Q ss_pred CCCchHHHHHHHHhcC----CCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHh
Q 043888 52 PEPPLDVKMAFMHFSQ----DGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHF 125 (372)
Q Consensus 52 ~~~~~ei~~lF~~ys~----~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~y 125 (372)
...|.|++.+|-+|+. +...|+.++|.+|----=.+..... ...++...+... ...+.+++.+|..|
T Consensus 29 ra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~-~~v~Lla~iaD~------tKDglisf~eF~af 99 (694)
T KOG0751|consen 29 RADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFND-KIVRLLASIADQ------TKDGLISFQEFRAF 99 (694)
T ss_pred cCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCCh-HHHHHHHhhhhh------cccccccHHHHHHH
Confidence 4567899999999985 3468999999887654444443333 233344443321 12356788888644
No 168
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=27.55 E-value=73 Score=25.60 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=42.7
Q ss_pred ccchHHHHHhhhhhcCcc-ccCCCCccccccccccccccc-cc--cCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHHHH
Q 043888 8 GEKNKEKTDQMQSQNGDV-AENSSNDGSYHYRMFNFFNRK-FK--IREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRFMV 82 (372)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~~~ty~Y~~~~~f~r~-~~--~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~ 82 (372)
.|+....+++.| +..|. +.+ .|..+...+..+.+. +- .....+.++|..+|..+..+ .+.++.++|...+.
T Consensus 3 ~~~~~~~l~~~F-~~~D~~dg~---dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 3 LEHAMESLILTF-HRYAGKDGD---KNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHHH-HHHhccCCC---CCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 455667788886 66655 542 255555655444332 10 11223457899999888554 36898888877664
No 169
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=26.24 E-value=98 Score=25.22 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=46.6
Q ss_pred hhccchHHHHHhhhhhc-CccccCCCCcccccccccccccccc-c--cCCCCCchHHHHHHHHhcCC-CCCcCHHHHHHH
Q 043888 6 TQGEKNKEKTDQMQSQN-GDVAENSSNDGSYHYRMFNFFNRKF-K--IREPEPPLDVKMAFMHFSQD-GLHMKPSEFRRF 80 (372)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ty~Y~~~~~f~r~~-~--~~~~~~~~ei~~lF~~ys~~-~~~mt~~~l~~F 80 (372)
|+-|+.=.++...| +. ++.+.+ .++++-..+..|..+. . ......+.+|..+|..+-.+ .+.++.++|..+
T Consensus 2 ~~le~~i~~l~~~F-~~y~~~dg~---~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l 77 (89)
T cd05023 2 TETERCIESLIAVF-QKYAGKDGD---SYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNL 77 (89)
T ss_pred ChHHHHHHHHHHHH-HHHhccCCC---cCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHH
Confidence 56677778888887 55 666554 3455445554444332 1 11223467899999987443 478999998887
Q ss_pred HHH
Q 043888 81 MVE 83 (372)
Q Consensus 81 L~~ 83 (372)
+..
T Consensus 78 ~~~ 80 (89)
T cd05023 78 IGG 80 (89)
T ss_pred HHH
Confidence 764
No 170
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=26.00 E-value=75 Score=31.58 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=27.6
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhc
Q 043888 227 SSPYPVIITLEDHLTPDLQAKAAEMITQIFGK 258 (372)
Q Consensus 227 ~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd 258 (372)
.+.+||+|+.-...+..++.+++++|-+.||-
T Consensus 93 ~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~ 124 (371)
T cd00012 93 PEEHPVLLTEPPLNPKSNREKTTEIMFETFNV 124 (371)
T ss_pred CCCCceEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 36899999977777889999999999999983
No 171
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=25.70 E-value=1.1e+02 Score=28.45 Aligned_cols=100 Identities=16% Similarity=0.282 Sum_probs=66.1
Q ss_pred HHHHHhhhhhcCccccCCCCccccccccccccccccccCCCCCchHHHHH--HHHhc-CCCCCcCHHHHHHHHHHHhCCC
Q 043888 12 KEKTDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKFKIREPEPPLDVKMA--FMHFS-QDGLHMKPSEFRRFMVEHQGET 88 (372)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~~~~~~~~~~ei~~l--F~~ys-~~~~~mt~~~l~~FL~~~Q~e~ 88 (372)
|+|+-+-|+..| .|.+.|.. |.-.|.+....+|.+|+.- |.-|- ++.+.+..++|..-|..--+.
T Consensus 73 k~ri~e~FSeDG--------~Gnlsfdd---FlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~- 140 (189)
T KOG0038|consen 73 KRRICEVFSEDG--------RGNLSFDD---FLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD- 140 (189)
T ss_pred HHHHHHHhccCC--------CCcccHHH---HHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc-
Confidence 788888884333 34454444 4444444444556677653 44453 345899999999999887765
Q ss_pred CCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 89 GCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 89 ~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
..+.++++.|++++-.+. ..-+.+.|++.+|-+.+
T Consensus 141 eLs~eEv~~i~ekvieEA---D~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 141 ELSDEEVELICEKVIEEA---DLDGDGKLSFAEFEHVI 175 (189)
T ss_pred cCCHHHHHHHHHHHHHHh---cCCCCCcccHHHHHHHH
Confidence 478888888888876331 12245779999999876
No 172
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=24.34 E-value=4.5e+02 Score=25.27 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhccc------ccCCCCeEEEeCCCCCHHHH
Q 043888 172 EVPIAKALQRGVRVIELDIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDNAF------VSSPYPVIITLEDHLTPDLQ 245 (372)
Q Consensus 172 ~e~Yi~AL~~GCRcIELD~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~AF------~~S~YPVILSLE~Hcs~~qQ 245 (372)
..++.+|...||+|||| |-++ |...... ..+........++..++.. +-++|+ |+|= +..++..
T Consensus 14 ~~a~~~~~~~G~~~~qi--f~~~----P~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~--iNla-s~~~~~r 83 (274)
T TIGR00587 14 QAAYNRAAEIGATAFMF--FLKS----PRWWRRP-MLEEEVIDWFKAALETNKNLSQIVLVHAPYL--INLA-SPDEEKE 83 (274)
T ss_pred HHHHHHHHHhCCCEEEE--EecC----ccccCCC-CCCHHHHHHHHHHHHHcCCCCcceeccCCee--eecC-CCCHHHH
Confidence 45788999999999998 6543 3222221 1123333333344555522 335565 5663 3456666
Q ss_pred HHHHHHHHHHh
Q 043888 246 AKAAEMITQIF 256 (372)
Q Consensus 246 ~~mA~~l~~if 256 (372)
++-.+.+++.+
T Consensus 84 ~~sv~~~~~~i 94 (274)
T TIGR00587 84 EKSLDVLDEEL 94 (274)
T ss_pred HHHHHHHHHHH
Confidence 66555555544
No 173
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=23.85 E-value=59 Score=29.47 Aligned_cols=65 Identities=20% Similarity=0.365 Sum_probs=42.7
Q ss_pred CCCCCCHHHHHHHHhcCCc--EEEEEeecCCC--------------CCCceEeeCCccc-ccchHHHHHHHHhhcccccC
Q 043888 166 LSSDCSEVPIAKALQRGVR--VIELDIWPNST--------------REDINVLHGRTLT-TPVSLINCLKSIRDNAFVSS 228 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCR--cIELD~Wdg~~--------------~~~p~V~HG~TlT-s~i~f~~vl~aIk~~AF~~S 228 (372)
+.|.-+.+.+.+.|+.-|+ -+++++.-... -+.+++.-| .+| ++|.++|+|.++
T Consensus 20 iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpg-a~THtSvAi~DAl~~~-------- 90 (140)
T cd00466 20 IYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPG-AYTHTSIALRDALAAV-------- 90 (140)
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcch-HHHHHHHHHHHHHHcC--------
Confidence 5677777777777776555 56777763211 123444444 455 899999999988
Q ss_pred CCCeEEEeCCCCCH
Q 043888 229 PYPVIITLEDHLTP 242 (372)
Q Consensus 229 ~YPVILSLE~Hcs~ 242 (372)
..|+ +|+|.|-
T Consensus 91 ~~P~---VEVHiSN 101 (140)
T cd00466 91 SIPV---IEVHISN 101 (140)
T ss_pred CCCE---EEEecCC
Confidence 4665 5899874
No 174
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=23.85 E-value=52 Score=29.99 Aligned_cols=65 Identities=25% Similarity=0.406 Sum_probs=43.3
Q ss_pred CCCCCCHHHHHHHHhcCCc--EEEEEeecCCC--------------CCCceEeeCCccc-ccchHHHHHHHHhhcccccC
Q 043888 166 LSSDCSEVPIAKALQRGVR--VIELDIWPNST--------------REDINVLHGRTLT-TPVSLINCLKSIRDNAFVSS 228 (372)
Q Consensus 166 L~g~SS~e~Yi~AL~~GCR--cIELD~Wdg~~--------------~~~p~V~HG~TlT-s~i~f~~vl~aIk~~AF~~S 228 (372)
+.|.-+.+.+.+.|+.-|. -+++++.-... -+.+++.-| .+| ++|.++|+|.++
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpg-a~THtSiAl~DAl~~~-------- 92 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPG-AYTHTSVALRDALAAV-------- 92 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECch-HHHHHHHHHHHHHHcC--------
Confidence 5677788888877776544 46777763211 123444444 454 899999999988
Q ss_pred CCCeEEEeCCCCCH
Q 043888 229 PYPVIITLEDHLTP 242 (372)
Q Consensus 229 ~YPVILSLE~Hcs~ 242 (372)
..|+ +|+|.|-
T Consensus 93 ~~P~---VEVHiSN 103 (146)
T PRK05395 93 SIPV---IEVHLSN 103 (146)
T ss_pred CCCE---EEEecCC
Confidence 5675 5899874
No 175
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=23.32 E-value=34 Score=33.65 Aligned_cols=95 Identities=17% Similarity=0.187 Sum_probs=53.2
Q ss_pred CCCCHHH---HHHHHhc-CCcEEEEEeec-CCCCCCceEeeC--CcccccchHHHHHHHHhhcccccCCCCeEEEeCCCC
Q 043888 168 SDCSEVP---IAKALQR-GVRVIELDIWP-NSTREDINVLHG--RTLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHL 240 (372)
Q Consensus 168 g~SS~e~---Yi~AL~~-GCRcIELD~Wd-g~~~~~p~V~HG--~TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hc 240 (372)
|.-+.+. ++.+|.+ ||-.|||.+=- .|--|+|+|-.- +.|...+++.++++.+++..=..+.-||||-.=-
T Consensus 19 G~P~~~~~~~~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G~~~~~~~~~~~~ir~~~~~~pivlm~Y~-- 96 (259)
T PF00290_consen 19 GYPDLETTLEILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNGFTLEKIFELVKEIRKKEPDIPIVLMTYY-- 96 (259)
T ss_dssp TSSSHHHHHHHHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT--HHHHHHHHHHHHHHCTSSEEEEEE-H--
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHhccCCCCCEEEEeec--
Confidence 4444443 4555544 99999998732 222345555433 3466778899999888876634578899886421
Q ss_pred CHHHH---HHHHHHHHHHhhcccCCCC
Q 043888 241 TPDLQ---AKAAEMITQIFGKMLYFPE 264 (372)
Q Consensus 241 s~~qQ---~~mA~~l~~ifGd~L~~p~ 264 (372)
++=.| .+.++-+++.-=+-|+.|.
T Consensus 97 N~i~~~G~e~F~~~~~~aGvdGlIipD 123 (259)
T PF00290_consen 97 NPIFQYGIERFFKEAKEAGVDGLIIPD 123 (259)
T ss_dssp HHHHHH-HHHHHHHHHHHTEEEEEETT
T ss_pred cHHhccchHHHHHHHHHcCCCEEEEcC
Confidence 22222 2345555555445566664
No 176
>PLN02952 phosphoinositide phospholipase C
Probab=23.28 E-value=2e+02 Score=31.88 Aligned_cols=49 Identities=10% Similarity=0.081 Sum_probs=37.4
Q ss_pred CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 70 LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 70 ~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
+.++.++|+.|.+.--.-......++..|+.+|.. ....|++++|.+||
T Consensus 15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~--------~~~~mt~~~l~~FL 63 (599)
T PLN02952 15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV--------GGGHMGADQLRRFL 63 (599)
T ss_pred CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC--------CCCccCHHHHHHHH
Confidence 57888999888776543333456889999999863 23579999999999
No 177
>PLN02964 phosphatidylserine decarboxylase
Probab=23.07 E-value=2.7e+02 Score=31.11 Aligned_cols=62 Identities=15% Similarity=0.157 Sum_probs=47.7
Q ss_pred HHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhhhcC
Q 043888 58 VKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFLLFD 129 (372)
Q Consensus 58 i~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL~~S 129 (372)
+..+|..+..+ .+.|+.++|..+|.. .++ ..+.++++.+++.+... +.+.|+.++|.+.| .+
T Consensus 181 i~~mf~~~D~DgdG~IdfdEFl~lL~~-lg~-~~seEEL~eaFk~fDkD-------gdG~Is~dEL~~vL-~~ 243 (644)
T PLN02964 181 ARRILAIVDYDEDGQLSFSEFSDLIKA-FGN-LVAANKKEELFKAADLN-------GDGVVTIDELAALL-AL 243 (644)
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHH-hcc-CCCHHHHHHHHHHhCCC-------CCCcCCHHHHHHHH-Hh
Confidence 78999998544 478999999999985 444 35777888888887532 24679999999988 54
No 178
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=22.87 E-value=3e+02 Score=26.94 Aligned_cols=71 Identities=21% Similarity=0.360 Sum_probs=46.8
Q ss_pred cccccccccccccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCC
Q 043888 37 YRMFNFFNRKFKIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRN 115 (372)
Q Consensus 37 Y~~~~~f~r~~~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~ 115 (372)
|..|..|.|+-- .+...+|.+|-.+. ++++..+|.+||+.- |.. -|.-..+.+|..+... ..+
T Consensus 87 yteF~eFsrkqI-------k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKL-gap-QTHL~lK~mikeVded-------~dg 150 (244)
T KOG0041|consen 87 YTEFSEFSRKQI-------KDAESMFKQYDEDRDGFIDLMELKRMMEKL-GAP-QTHLGLKNMIKEVDED-------FDG 150 (244)
T ss_pred hhhhhHHHHHHH-------HHHHHHHHHhcccccccccHHHHHHHHHHh-CCc-hhhHHHHHHHHHhhcc-------ccc
Confidence 355666666521 46777899997664 899999999999864 343 3555567777776521 224
Q ss_pred CCCHHHHH
Q 043888 116 GLNLDDFF 123 (372)
Q Consensus 116 ~Ltld~F~ 123 (372)
.||+-.|+
T Consensus 151 klSfrefl 158 (244)
T KOG0041|consen 151 KLSFREFL 158 (244)
T ss_pred chhHHHHH
Confidence 56766664
No 179
>PRK03972 ribosomal biogenesis protein; Validated
Probab=22.74 E-value=3.8e+02 Score=25.85 Aligned_cols=114 Identities=12% Similarity=0.168 Sum_probs=63.9
Q ss_pred CCCCHHHH-HHHHhcCCcEEEEEeecCC-CCCCceEee---CC---cccccchHHHHHHHH--hhcccccCCCCeEEEeC
Q 043888 168 SDCSEVPI-AKALQRGVRVIELDIWPNS-TREDINVLH---GR---TLTTPVSLINCLKSI--RDNAFVSSPYPVIITLE 237 (372)
Q Consensus 168 g~SS~e~Y-i~AL~~GCRcIELD~Wdg~-~~~~p~V~H---G~---TlTs~i~f~~vl~aI--k~~AF~~S~YPVILSLE 237 (372)
|..+...+ ..|..+|...|-+ |+... .-+...|+| |. |..-+++=-...+-| +..+=.++.||.||+--
T Consensus 34 Gk~~lkel~~~A~~~g~TdLIV-V~E~rg~P~~L~i~hLP~gP~GPTa~FkLsnV~l~~ei~~~~~~~~s~~~p~iItts 112 (208)
T PRK03972 34 GKKTIQDLLMEAYDRGYERLLI-INVWKGNPLKMTFIKVGPEDWGYLGYLYLHGIKLQREMGFRNLRPIREDMPLVITTA 112 (208)
T ss_pred CCccHHHHHHHHHHCCCCeEEE-EecCCCcCCeEEEEcCCCCCCCceEEEEEccEEEHHHcccCCCCCccccccEEEEcC
Confidence 34555554 4577889887754 55421 113568888 43 433332222222456 34566678999887664
Q ss_pred CCCCHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCChhhhc-----CCeEeecCCCC
Q 043888 238 DHLTPDLQAKAAEMITQIFGKMLYFPESNKLAEFPSPESLK-----QRIIISTKPPK 289 (372)
Q Consensus 238 ~Hcs~~qQ~~mA~~l~~ifGd~L~~p~~~~~~~lPSPe~Lk-----~KILIk~K~pk 289 (372)
-.+.+ .....|+.+-+.||- -|++... =|-++|. --|||-...|.
T Consensus 113 ~kt~~-g~~~~Ak~lA~eLgi-~yV~R~k-----~Sl~~L~~~~~~d~vLVV~~~~~ 162 (208)
T PRK03972 113 KRVGL-DHMAFAQVFAELTGG-KFVPRGG-----KSLQDIADKYNTDVLGVIERHPR 162 (208)
T ss_pred CCCCH-HHHHHHHHHHHHhCC-ceeCcCC-----cCHHHHHhhhcCceEEEEecCCC
Confidence 44444 447778899999994 3444211 1555662 33665555554
No 180
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=22.28 E-value=1.5e+02 Score=24.03 Aligned_cols=52 Identities=8% Similarity=0.105 Sum_probs=32.3
Q ss_pred cccccccccccccccc-ccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHH
Q 043888 32 DGSYHYRMFNFFNRKF-KIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVE 83 (372)
Q Consensus 32 ~~ty~Y~~~~~f~r~~-~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~ 83 (372)
.|+.+-..+..+.++. ......+++||..+|..+-.++ +.++.++|..++..
T Consensus 26 ~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 26 KNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred CCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 4666555554444431 2334456788888888875433 68888888777753
No 181
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=21.33 E-value=4.2e+02 Score=25.15 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=34.1
Q ss_pred CceEeeCCcccccchHHHHHHHH-hhcccccCCCCeEEE-e-----CCCCCHHHHHHHHHHHHHHhh
Q 043888 198 DINVLHGRTLTTPVSLINCLKSI-RDNAFVSSPYPVIIT-L-----EDHLTPDLQAKAAEMITQIFG 257 (372)
Q Consensus 198 ~p~V~HG~TlTs~i~f~~vl~aI-k~~AF~~S~YPVILS-L-----E~Hcs~~qQ~~mA~~l~~ifG 257 (372)
+.+..|-+. ...-.|.+.|+.+ +.+. -||.|| + ...++.++|....+.+...|-
T Consensus 139 D~iavH~Y~-~~~~~~~~~i~~~~~~~~-----kPIWITEf~~~~~~~~~~~~~~~~fl~~~~~~ld 199 (239)
T PF11790_consen 139 DFIAVHWYG-GDADDFKDYIDDLHNRYG-----KPIWITEFGCWNGGSQGSDEQQASFLRQALPWLD 199 (239)
T ss_pred cEEEEecCC-cCHHHHHHHHHHHHHHhC-----CCEEEEeecccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 367889883 2355677777666 3334 999999 3 456677776665554444443
No 182
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=21.09 E-value=2.6e+02 Score=29.86 Aligned_cols=62 Identities=6% Similarity=0.182 Sum_probs=35.7
Q ss_pred HHHHHHHHhcC-CCCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhhcccccccccCCCCCHHHHHHhh
Q 043888 57 DVKMAFMHFSQ-DGLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNIISSRHHITRFTRNGLNLDDFFHFL 126 (372)
Q Consensus 57 ei~~lF~~ys~-~~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~~~~~~~~~~~~~~Ltld~F~~yL 126 (372)
.+..+|..+-. +.+.++..+|.+=|..-+.. ....+.+..|+...... ....+++.+|.+||
T Consensus 15 r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~-~~~~~~~~~l~~~~d~~-------~dg~vDy~eF~~Y~ 77 (463)
T KOG0036|consen 15 RIRCLFKELDSKNDGQVDLDQLEKGLEKLDHP-KPNYEAAKMLFSAMDAN-------RDGRVDYSEFKRYL 77 (463)
T ss_pred HHHHHHHHhccCCCCceeHHHHHHHHHhcCCC-CCchHHHHHHHHhcccC-------cCCcccHHHHHHHH
Confidence 46667777743 44677777777666666655 33445555555543311 12456666666666
No 183
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=21.07 E-value=66 Score=28.88 Aligned_cols=50 Identities=20% Similarity=0.281 Sum_probs=34.7
Q ss_pred CchHHHHHHHHhcCC-CCCcCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHh
Q 043888 54 PPLDVKMAFMHFSQD-GLHMKPSEFRRFMVEHQGETGCTLSRAEEIVNNII 103 (372)
Q Consensus 54 ~~~ei~~lF~~ys~~-~~~mt~~~l~~FL~~~Q~e~~~t~~~a~~Ii~~~~ 103 (372)
+..++.-||.++... ...|+.++|..+|.+.-.....+...++++++++.
T Consensus 39 t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~~~~~~~~~~~kl~ 89 (154)
T PF05517_consen 39 TSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGKDKSSAEELKEKLT 89 (154)
T ss_dssp -HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSCCCTHHHHHHHHHH
T ss_pred chHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 457999999997543 35699999999998765443343236677777773
No 184
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=20.91 E-value=52 Score=31.43 Aligned_cols=83 Identities=29% Similarity=0.346 Sum_probs=42.1
Q ss_pred HHHHHHHhc-CCcEEEEEeecCCCCCCceEeeCC--------cccccchHHHHHHHHhhcccccCCCCeEEEeCCCCCHH
Q 043888 173 VPIAKALQR-GVRVIELDIWPNSTREDINVLHGR--------TLTTPVSLINCLKSIRDNAFVSSPYPVIITLEDHLTPD 243 (372)
Q Consensus 173 e~Yi~AL~~-GCRcIELD~Wdg~~~~~p~V~HG~--------TlTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~Hcs~~ 243 (372)
..++++|.. ||-.||||+ |-+ +| |.-|+ .|..-+++..+++.|++-.=.. .-||+|-..- ++-
T Consensus 17 ~~~~~~l~~~Gad~iel~i-Pfs---dP-v~DG~~I~~a~~~al~~g~~~~~~~~~~~~vr~~~-~~pv~lm~y~--n~~ 88 (242)
T cd04724 17 LEILKALVEAGADIIELGI-PFS---DP-VADGPVIQAASERALANGVTLKDVLELVKEIRKKN-TIPIVLMGYY--NPI 88 (242)
T ss_pred HHHHHHHHHCCCCEEEECC-CCC---CC-CCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcC-CCCEEEEEec--CHH
Confidence 345666655 899999996 322 12 33333 3444555555555554432222 5688774331 222
Q ss_pred HH---HHHHHHHHHHhhcccCCC
Q 043888 244 LQ---AKAAEMITQIFGKMLYFP 263 (372)
Q Consensus 244 qQ---~~mA~~l~~ifGd~L~~p 263 (372)
.+ .++++.+.+.=-+.|..|
T Consensus 89 ~~~G~~~fi~~~~~aG~~giiip 111 (242)
T cd04724 89 LQYGLERFLRDAKEAGVDGLIIP 111 (242)
T ss_pred HHhCHHHHHHHHHHCCCcEEEEC
Confidence 22 344555555433445554
No 185
>PF15149 CATSPERB: Cation channel sperm-associated protein subunit beta protein family
Probab=20.75 E-value=1e+02 Score=33.51 Aligned_cols=58 Identities=19% Similarity=0.458 Sum_probs=50.0
Q ss_pred ccccchHHHHHHHHhhcccccCCCCeEEEeCC---------------------------CCCHHHHHHHHHHHHHHhhcc
Q 043888 207 LTTPVSLINCLKSIRDNAFVSSPYPVIITLED---------------------------HLTPDLQAKAAEMITQIFGKM 259 (372)
Q Consensus 207 lTs~i~f~~vl~aIk~~AF~~S~YPVILSLE~---------------------------Hcs~~qQ~~mA~~l~~ifGd~ 259 (372)
+..-|.|.||.+-+-..-|-.+.||+.|-|.+ |-.++.-.+|..+|+.+++..
T Consensus 364 ~S~~vaFSDCrEKV~RfkfPV~qyPi~L~I~~e~~~ip~e~PYlVTvtEVNnR~nW~lk~~~~~~v~k~k~~le~~l~~~ 443 (540)
T PF15149_consen 364 FSHAVAFSDCREKVPRFKFPVTQYPISLEIKNEDGSIPLESPYLVTVTEVNNRKNWKLKHNVPENVKKMKNYLEPILNSP 443 (540)
T ss_pred HHHHHhhhhhhhhhheeecccccCceEEEEEcCCCccccCCCeEEEEEEecCccCceecccCCHHHHHHHHHHHhhcCcc
Confidence 45579999999999999999999999887643 667788899999999999999
Q ss_pred cCCCC
Q 043888 260 LYFPE 264 (372)
Q Consensus 260 L~~p~ 264 (372)
+|-|.
T Consensus 444 vYNP~ 448 (540)
T PF15149_consen 444 VYNPL 448 (540)
T ss_pred eeCcc
Confidence 98774
No 186
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=20.63 E-value=1.5e+02 Score=36.50 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=55.0
Q ss_pred HHhhhhhcCccccCCCCcccccccccccccccc-----ccCCCCCchHHHHHHHHhcCCC-CCcCHHHHHHHHHHHhCCC
Q 043888 15 TDQMQSQNGDVAENSSNDGSYHYRMFNFFNRKF-----KIREPEPPLDVKMAFMHFSQDG-LHMKPSEFRRFMVEHQGET 88 (372)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ty~Y~~~~~f~r~~-----~~~~~~~~~ei~~lF~~ys~~~-~~mt~~~l~~FL~~~Q~e~ 88 (372)
..-|| .-.|...| |-++|+.|..|.|.. .+-+.+|-|+++.++.-.--++ ++++..+..+||...--+.
T Consensus 2255 Fs~~f-khFDkek~----G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeN 2329 (2399)
T KOG0040|consen 2255 FSMMF-KHFDKEKN----GRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETEN 2329 (2399)
T ss_pred HHHHH-HHhchhhc----cCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccc
Confidence 34564 77676665 889989998777753 3445678889999998886554 8999999999999876665
Q ss_pred CCCHH
Q 043888 89 GCTLS 93 (372)
Q Consensus 89 ~~t~~ 93 (372)
..+.+
T Consensus 2330 I~s~~ 2334 (2399)
T KOG0040|consen 2330 ILSSE 2334 (2399)
T ss_pred ccchH
Confidence 44443
No 187
>COG1590 Uncharacterized conserved protein [Function unknown]
Probab=20.57 E-value=33 Score=32.96 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=26.1
Q ss_pred EeecCCCCCCceEeeCCcccccchHHHHHHHHhhc----ccccCCCCeE
Q 043888 189 DIWPNSTREDINVLHGRTLTTPVSLINCLKSIRDN----AFVSSPYPVI 233 (372)
Q Consensus 189 D~Wdg~~~~~p~V~HG~TlTs~i~f~~vl~aIk~~----AF~~S~YPVI 233 (372)
+-|++.+..-.-+.|- ++++.+|+++++.. +|....=|++
T Consensus 58 ~~g~k~gs~wl~K~H~-----~~~~~ev~ealk~~~~~~iwl~~~ppIl 101 (208)
T COG1590 58 SPGDKPGSRWLGKWHR-----PISLDEVLEALKKAREGYIWLKVQPPIL 101 (208)
T ss_pred cCCCCCCCEEEEEecC-----cCCHHHHHHHHHhcccceEEEEeeCCEE
Confidence 6677654333445565 68889999998877 5555554543
No 188
>PTZ00280 Actin-related protein 3; Provisional
Probab=20.34 E-value=1.1e+02 Score=31.12 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=33.5
Q ss_pred HHHHHHHhhcccc------cCCCCeEEEeCCCCCHHHHHHHHHHHHHHhhcc
Q 043888 214 INCLKSIRDNAFV------SSPYPVIITLEDHLTPDLQAKAAEMITQIFGKM 259 (372)
Q Consensus 214 ~~vl~aIk~~AF~------~S~YPVILSLE~Hcs~~qQ~~mA~~l~~ifGd~ 259 (372)
.+.++.|=+|.|. ..+.||+|+--...+..++.+|+++|-|.||--
T Consensus 81 wd~~e~l~~~~~~~~L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p 132 (414)
T PTZ00280 81 WDLMEKFWEQCIFKYLRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVK 132 (414)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCC
Confidence 4566666666552 247999998444456788999999999999864
No 189
>PRK08136 glycosyl transferase family protein; Provisional
Probab=20.31 E-value=1e+02 Score=31.12 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=18.0
Q ss_pred CceEeeCC-cccccchHHHHHHHHh
Q 043888 198 DINVLHGR-TLTTPVSLINCLKSIR 221 (372)
Q Consensus 198 ~p~V~HG~-TlTs~i~f~~vl~aIk 221 (372)
-+++.||. ..++++.-.||+++..
T Consensus 110 ~~V~kHGnr~vssk~gsadvleaLG 134 (317)
T PRK08136 110 VPVLVHGVSEDPTRVTSAEIFEALG 134 (317)
T ss_pred CeEEEECCCCCCCcccHHHHHHHcC
Confidence 46899995 5777787888887763
No 190
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=20.25 E-value=2.2e+02 Score=28.82 Aligned_cols=57 Identities=14% Similarity=0.314 Sum_probs=39.9
Q ss_pred HHHHHHHHhcCC--cEEEEEe-ec--------C-----CCCCCceEeeCCc--c-cc-cchHHHHHHHHhhcccccC
Q 043888 172 EVPIAKALQRGV--RVIELDI-WP--------N-----STREDINVLHGRT--L-TT-PVSLINCLKSIRDNAFVSS 228 (372)
Q Consensus 172 ~e~Yi~AL~~GC--RcIELD~-Wd--------g-----~~~~~p~V~HG~T--l-Ts-~i~f~~vl~aIk~~AF~~S 228 (372)
++.+.+++..|- +...|+| |+ + ...+++.|.||.. . .. --.|+.+-+||.+|-|-++
T Consensus 204 DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~~g~~ 280 (304)
T cd06430 204 DQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDD 280 (304)
T ss_pred CHHHHHHHHcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCCCCCCccchHHHHHHHHHHhcccccc
Confidence 447888888886 5777887 65 1 1225789999842 2 12 2458889999999998765
Done!