Query         043891
Match_columns 200
No_of_seqs    104 out of 422
Neff          6.3 
Searched_HMMs 46136
Date          Fri Mar 29 09:17:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043891.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043891hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 TIGR01569 A_tha_TIGR01569 plan 100.0 9.2E-44   2E-48  286.2  17.0  154   35-194     1-154 (154)
  2 PF04535 DUF588:  Domain of unk 100.0 3.4E-39 7.4E-44  257.5  15.5  148   28-182     1-149 (149)
  3 PF01284 MARVEL:  Membrane-asso  98.5 4.5E-06 9.9E-11   64.4  12.7  141   31-188     3-143 (144)
  4 PF12304 BCLP:  Beta-casein lik  44.6 1.3E+02  0.0028   25.2   7.3   52   87-139    42-95  (188)
  5 KOG4016 Synaptic vesicle prote  43.8 2.1E+02  0.0046   24.6  12.9  146   29-191    20-167 (233)
  6 PHA03093 EEV glycoprotein; Pro  41.3      34 0.00074   28.5   3.4   37    3-43      9-45  (185)
  7 PF12271 Chs3p:  Chitin synthas  28.8 4.3E+02  0.0093   23.7   8.7   94   27-131   144-241 (293)
  8 KOG3088 Secretory carrier memb  26.1   3E+02  0.0066   24.8   7.0   65  116-195   200-264 (313)
  9 PF06376 DUF1070:  Protein of u  21.6 1.2E+02  0.0026   18.5   2.5   15  122-136    13-27  (34)
 10 PF03954 Lectin_N:  Hepatic lec  18.0 1.6E+02  0.0034   23.6   3.2   12   71-82     66-77  (138)

No 1  
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=100.00  E-value=9.2e-44  Score=286.19  Aligned_cols=154  Identities=38%  Similarity=0.574  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHhhcccccch
Q 043891           35 VALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRK  114 (200)
Q Consensus        35 l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~v~~~~~~~  114 (200)
                      ++||+++++++++|+++|+||||+.++..+    .+++++||+|+++|+|+|++|+|+|+|+++|+++++..++++. .+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~----~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~-~~   75 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQ----LITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRR-VF   75 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecc----cceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ch
Confidence            479999999999999999999999877411    2778999999999999999999999999999999885443322 12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043891          115 RLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSL  194 (200)
Q Consensus       115 ~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~s~iSa~~L  194 (200)
                      ...|++|++||+++||++||++||+++++++|+||+|.+|+|+|++ +|+||+|+++|++++|+|++++++++++|++++
T Consensus        76 ~~~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~-~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        76 FKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGV-FGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4589999999999999999999999999999999999999999999 999999999999999999999999999999975


No 2  
>PF04535 DUF588:  Domain of unknown function (DUF588);  InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=100.00  E-value=3.4e-39  Score=257.49  Aligned_cols=148  Identities=36%  Similarity=0.556  Sum_probs=136.7

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHh-
Q 043891           28 VIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLST-  106 (200)
Q Consensus        28 ~~~~~~~l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~-  106 (200)
                      |..+..+++||+++++++++|+++|++|+|+.++.      .++.+++|+|+++|+|++++|+|+|+|+++|++.++.. 
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~------~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~   74 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVF------SIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSL   74 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceee------ccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999998774      57789999999999999999999999999999999854 


Q ss_pred             hcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHH
Q 043891          107 IRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTD  182 (200)
Q Consensus       107 v~~~~~~~~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~  182 (200)
                      .+++..++...|++|++||+++||++||++||+++++++++|+++.+|+++|+. +++||+|+++|++++|+|+++
T Consensus        75 ~~~~~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~-~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   75 SRGKLRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQ-FGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             HccCCcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccc-hhhHHHHHHHHHHHHHHHHHC
Confidence            344345677899999999999999999999999999999999999999999999 999999999999999999874


No 3  
>PF01284 MARVEL:  Membrane-associating domain;  InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain. The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].
Probab=98.48  E-value=4.5e-06  Score=64.40  Aligned_cols=141  Identities=18%  Similarity=0.067  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHhhccc
Q 043891           31 FRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKL  110 (200)
Q Consensus        31 ~~~~l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~v~~~  110 (200)
                      +....+||+++++++++.+.+++....+..            .......++..|.+.+.++...+++..++..+.. .+.
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~   69 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS------------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS-LKY   69 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc------------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence            345789999999999999999998764221            1124556778999999999999988888876522 111


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 043891          111 ASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTM  188 (200)
Q Consensus       111 ~~~~~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~s~  188 (200)
                      ..+....+..++.|.+++.+-+.+..+-+.-....+.+++   ++..+.. .++-|+...++.+++|++++.++.+.+
T Consensus        70 ~~~~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~-~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   70 RPRIPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYS-GCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCC-CCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            2233345678999999999998877666543322122211   1222333 456799999999999999999988765


No 4  
>PF12304 BCLP:  Beta-casein like protein;  InterPro: IPR020977  This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[]. 
Probab=44.60  E-value=1.3e+02  Score=25.21  Aligned_cols=52  Identities=8%  Similarity=0.220  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHhHHH--hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 043891           87 VALLVACLYSFITALTSLS--TIRKLASRKRLLLLIAFLDTLMLGVVASAIGAAL  139 (200)
Q Consensus        87 ~an~I~~~Ysllql~~~i~--~v~~~~~~~~~~~~~f~~Dqv~ayLL~SaasAA~  139 (200)
                      ++|+|...=.++.+..+|.  .+.|..+++++-|.++..-. ...|+-.|++.+.
T Consensus        42 vsNiisv~Sgll~I~~GI~AIvlSrnl~~~~L~W~Ll~~S~-ln~LlSaAc~vGL   95 (188)
T PF12304_consen   42 VSNIISVTSGLLSIICGIVAIVLSRNLRNRPLHWTLLVVSL-LNALLSAACAVGL   95 (188)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHhhhccCCCCcchHHHHHHHH-HHHHHHHHHHHHH
Confidence            5789988888888888773  33666667778888887654 3334434444333


No 5  
>KOG4016 consensus Synaptic vesicle protein Synaptogyrin involved in regulation of Ca2+-dependent exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=43.76  E-value=2.1e+02  Score=24.60  Aligned_cols=146  Identities=16%  Similarity=0.101  Sum_probs=79.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHh--
Q 043891           29 IYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLST--  106 (200)
Q Consensus        29 ~~~~~~l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~--  106 (200)
                      -++.-..++|++..+++++-.--+.+.-=.+.-.     ....+=.-=.|..+.+|=+++-+.+++=+++-++++...  
T Consensus        20 F~rkP~ti~R~~~~lFsliVf~si~~eGy~n~~~-----~~~~~Ciynrn~~ACsyg~avG~~Afla~~~flvlD~~f~q   94 (233)
T KOG4016|consen   20 FLRKPQTILRVVSWLFSLIVFGSIVNEGYLNSAS-----SGEEFCIYNRNSNACSYGVAVGVLAFLACLAFLVLDVYFPQ   94 (233)
T ss_pred             HhcCchhHHHHHHHHHHHhheeeeccccccCccc-----CCceEEEECCCCcchhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            3456678999999999887665554321111000     011112223678899999999999999888888887732  


Q ss_pred             hcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHH
Q 043891          107 IRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTL  186 (200)
Q Consensus       107 v~~~~~~~~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~  186 (200)
                      +..-..+|+....++..-.+-+.+-+-+      -.++..      +|...-.+...-=-+.+.++|+.+|+..+.-...
T Consensus        95 ISsv~~RkraVl~Dl~~SalwtflwfvG------Fc~l~n------qwqvs~p~~~~~~a~saraaIafsffSilsW~~~  162 (233)
T KOG4016|consen   95 ISSVKDRKRAVLADLGVSALWAFLWFVG------FCFLAN------QWQVSKPKENPLGAGSARAAIAFSFFSILSWGGQ  162 (233)
T ss_pred             hcccchhHHHHHHHHHHHHHHHHHHHHH------HHHHHH------HhhccCCCCCCcCcchHHHHHHHHHHHHHHHHHH
Confidence            2111112333333333333333332221      222221      3432111100000236889999999988887777


Q ss_pred             HHHHH
Q 043891          187 TMHST  191 (200)
Q Consensus       187 s~iSa  191 (200)
                      +++.-
T Consensus       163 A~lA~  167 (233)
T KOG4016|consen  163 AVLAF  167 (233)
T ss_pred             HHHHH
Confidence            76643


No 6  
>PHA03093 EEV glycoprotein; Provisional
Probab=41.25  E-value=34  Score=28.54  Aligned_cols=37  Identities=16%  Similarity=0.155  Sum_probs=27.7

Q ss_pred             cccchhcccCCCCccCCCCCCCCcccchhhHHHHHHHHHHH
Q 043891            3 NTSAVTASLDNPASQLKNETSRPSRVIYFRIDVALRILLFV   43 (200)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~LR~~a~~   43 (200)
                      |+.++++|+=-|+..+|+.-    .+..+...+.+|+..+.
T Consensus         9 n~~~f~gsTiYG~klkkk~~----~kk~r~i~i~~Risiii   45 (185)
T PHA03093          9 NQTSFFGSTIYGDKLKKKKN----KKKVKCIGICIRISIII   45 (185)
T ss_pred             ccceeeeeeeechhhcccch----HHHHHHHHHHHHHHHHH
Confidence            67788888888888766554    24557899999998754


No 7  
>PF12271 Chs3p:  Chitin synthase III catalytic subunit;  InterPro: IPR022057  This family of proteins is found in eukaryotes. Proteins in this family are typically between 288 and 332 amino acids in length. This family is the catalytic domain of chitin synthase III. Chitin is a major component of fungal cell walls and this enzyme is responsible for its formation. 
Probab=28.77  E-value=4.3e+02  Score=23.68  Aligned_cols=94  Identities=11%  Similarity=0.034  Sum_probs=49.6

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHH-HHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHH-HHHHHHHHHHhHH
Q 043891           27 RVIYFRIDVALRILLFVFSFVAILL-IVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLV-ACLYSFITALTSL  104 (200)
Q Consensus        27 ~~~~~~~~l~LR~~a~~~sl~A~~v-M~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I-~~~Ysllql~~~i  104 (200)
                      +++-...-..+|..+++.-++...+ +.|-+.-...           ..+-+...-|.-....|.| ...|-++|+.+.+
T Consensus       144 eDGT~~Sl~ll~~ss~~~f~~t~~isl~Tf~~w~~~-----------~~~~~~~~Lfvl~~l~p~i~l~~Y~v~q~~lv~  212 (293)
T PF12271_consen  144 EDGTPLSLWLLRGSSLILFIGTFYISLDTFKSWTGY-----------LSPTNTIALFVLYYLLPAIFLVIYVVLQLILVL  212 (293)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-----------CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444556667888887776666553 3343321100           1112334445444455554 4569999999877


Q ss_pred             Hhhcc--cccchhHHHHHHHHHHHHHHHH
Q 043891          105 STIRK--LASRKRLLLLIAFLDTLMLGVV  131 (200)
Q Consensus       105 ~~v~~--~~~~~~~~~~~f~~Dqv~ayLL  131 (200)
                      ..++.  +...-...-++|+.-|++.|.+
T Consensus       213 ~vL~e~wp~g~i~~~~~fFv~gQv~~y~~  241 (293)
T PF12271_consen  213 RVLGERWPLGYILLGVFFFVAGQVFLYVF  241 (293)
T ss_pred             HHhhhHhHHHHHHHHHHHHHHHHHHHHHh
Confidence            54421  1111223445556666666554


No 8  
>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.07  E-value=3e+02  Score=24.76  Aligned_cols=65  Identities=15%  Similarity=0.262  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043891          116 LLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLY  195 (200)
Q Consensus       116 ~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~s~iSa~~L~  195 (200)
                      .+++.++++|....++-     |.+     -+|....+|.+.=+.    |-.+..+++ +-++.++++-+.+++|.+-+-
T Consensus       200 ~~FFF~y~~q~~~~v~q-----Avg-----f~g~~~~G~i~ai~~----~~~~i~v~i-~m~i~a~~Ft~~av~~i~~i~  264 (313)
T KOG3088|consen  200 GAFFFTYFFQIVFCVFQ-----AVG-----FPGWGLCGWIPAIDV----LSGNIAVGI-LMLIGAGLFTLEAVLSIWVLQ  264 (313)
T ss_pred             HHHHHHHHHHHHHHHHH-----HHc-----cCCcchhhhhhHhhc----cCcchHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            45566679998877772     222     456666677654333    334444444 556666677777777765543


No 9  
>PF06376 DUF1070:  Protein of unknown function (DUF1070);  InterPro: IPR009424 This entry represents the arabinogalactan peptide family found in plants [].
Probab=21.55  E-value=1.2e+02  Score=18.47  Aligned_cols=15  Identities=7%  Similarity=-0.139  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHH
Q 043891          122 FLDTLMLGVVASAIG  136 (200)
Q Consensus       122 ~~Dqv~ayLL~Saas  136 (200)
                      ..||.++|+|+-++-
T Consensus        13 aiDqgiay~Lm~~Al   27 (34)
T PF06376_consen   13 AIDQGIAYMLMLVAL   27 (34)
T ss_pred             hhhHHHHHHHHHHHH
Confidence            369999999987543


No 10 
>PF03954 Lectin_N:  Hepatic lectin, N-terminal domain;  InterPro: IPR005640 Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. C-type lectins display a wide range of specificities. They require Ca2+ for their activity They are found predominantly but not exclusively in vertebrates. This entry presents N-terminal domain, which is found in C-type lectins.; GO: 0005529 sugar binding, 0016020 membrane
Probab=17.95  E-value=1.6e+02  Score=23.55  Aligned_cols=12  Identities=17%  Similarity=0.415  Sum_probs=6.7

Q ss_pred             eeeeEecccCch
Q 043891           71 KIPAKFTYFPAF   82 (200)
Q Consensus        71 ~~~a~f~~~~af   82 (200)
                      +....|++++.=
T Consensus        66 tLretfsNFsss   77 (138)
T PF03954_consen   66 TLRETFSNFSSS   77 (138)
T ss_pred             HHHHHHhcccHH
Confidence            345556666654


Done!