Query 043898
Match_columns 118
No_of_seqs 106 out of 904
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 16:07:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 2.2E-32 7.4E-37 179.8 1.2 91 27-118 1-92 (93)
2 1afh_A Maize nonspecific lipid 100.0 1.9E-31 6.4E-36 175.2 2.4 92 27-118 1-93 (93)
3 1t12_A LTP 1, nonspecific lipi 100.0 3.7E-31 1.3E-35 173.2 1.1 90 27-118 1-91 (91)
4 1bwo_A NS-LTP1, nonspecific li 100.0 8.7E-31 3E-35 171.1 1.4 89 28-117 1-90 (90)
5 1siy_A LTP 1, NS-LTP1, nonspec 100.0 1.5E-30 5.3E-35 170.2 2.4 90 28-118 1-91 (91)
6 2alg_A Non-specific lipid tran 100.0 2.9E-30 9.8E-35 169.3 0.5 91 27-118 1-92 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.6 3.7E-17 1.3E-21 103.4 0.0 70 27-106 2-75 (77)
8 1n89_A Lipid transfer protein; 99.4 3.6E-14 1.2E-18 87.5 1.7 59 35-105 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.4 9.3E-14 3.2E-18 86.1 0.8 59 35-105 6-66 (69)
10 1hyp_A Hydrophobic protein fro 94.5 0.019 6.5E-07 35.9 2.1 72 28-115 6-78 (80)
11 3ob4_A Conglutin, maltose ABC 86.8 0.033 1.1E-06 44.4 -3.4 50 53-110 429-492 (500)
12 1s6d_A Albumin 8; all helix, f 67.2 2 6.7E-05 27.7 1.1 66 28-103 9-97 (103)
13 1w2q_A Conglutin, ARA H 6; all 39.8 5.9 0.0002 26.4 -0.1 69 27-103 13-112 (127)
14 2lvf_A 2S albumin; allergen, c 31.1 17 0.0006 23.5 1.1 58 36-103 17-101 (114)
15 2ds2_B Sweet protein mabinlin- 26.9 28 0.00096 20.7 1.5 42 52-103 7-62 (72)
16 1hss_A 0.19 alpha-amylase inhi 26.1 38 0.0013 22.4 2.1 61 35-105 15-104 (124)
17 1psy_A 2S albumin, RICC3; albu 23.3 46 0.0016 21.9 2.1 68 29-106 17-120 (125)
18 1pnb_B Napin BNIB; napin IA an 22.4 20 0.00068 21.4 0.2 46 50-105 9-67 (75)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.97 E-value=2.2e-32 Score=179.80 Aligned_cols=91 Identities=40% Similarity=0.876 Sum_probs=85.6
Q ss_pred cCCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCCC-CCHHHHhhhhhccCCCCC
Q 043898 27 AISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKMN-PNSQLAQALPTNCGITLP 105 (118)
Q Consensus 27 ~~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~~-in~~~a~~LP~~Cgv~~~ 105 (118)
+++|+++...|.||++|++|+ +.|++.||+++++|++.++|+.|||++|+|+++.+..++ ||.+|+.+||++||+++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~-~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG-PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS-SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCC-CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 578999999999999999987 579999999999999999999999999999998766665 999999999999999999
Q ss_pred CCCCCCcCCCCCC
Q 043898 106 VPVSPNVDCSKIN 118 (118)
Q Consensus 106 ~~i~~~~dC~~i~ 118 (118)
|||+|++||++|+
T Consensus 80 ~~Is~~~dC~~v~ 92 (93)
T 2ljo_A 80 YKISTTTNCNTVK 92 (93)
T ss_dssp SCCSTTCCGGGCC
T ss_pred CCCCCCCCCCCCC
Confidence 9999999999996
No 2
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.96 E-value=1.9e-31 Score=175.21 Aligned_cols=92 Identities=39% Similarity=0.886 Sum_probs=86.0
Q ss_pred cCCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCCC-CCHHHHhhhhhccCCCCC
Q 043898 27 AISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKMN-PNSQLAQALPTNCGITLP 105 (118)
Q Consensus 27 ~~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~~-in~~~a~~LP~~Cgv~~~ 105 (118)
+++|+++...|.||++|++++++.|+++||++++++++.++|+.|||..|+|++.....++ ||.+++.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 4689999999999999999887779999999999999999999999999999987767774 999999999999999999
Q ss_pred CCCCCCcCCCCCC
Q 043898 106 VPVSPNVDCSKIN 118 (118)
Q Consensus 106 ~~i~~~~dC~~i~ 118 (118)
|+|++++||++|+
T Consensus 81 ~~is~~~dC~~v~ 93 (93)
T 1afh_A 81 YTISTSTDCSRVN 93 (93)
T ss_dssp SCCSTTCCSSSCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999996
No 3
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.96 E-value=3.7e-31 Score=173.24 Aligned_cols=90 Identities=40% Similarity=0.856 Sum_probs=83.9
Q ss_pred cCCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCC-CCCHHHHhhhhhccCCCCC
Q 043898 27 AISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKM-NPNSQLAQALPTNCGITLP 105 (118)
Q Consensus 27 ~~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~-~in~~~a~~LP~~Cgv~~~ 105 (118)
+++|+++...|.||++|++++++ |+ +||++++++++.++|+.|||..|+|+++....+ +||.+++.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCC
Confidence 46899999999999999998866 88 999999999999999999999999998766667 4999999999999999999
Q ss_pred CCCCCCcCCCCCC
Q 043898 106 VPVSPNVDCSKIN 118 (118)
Q Consensus 106 ~~i~~~~dC~~i~ 118 (118)
|+|++++||++|+
T Consensus 79 ~~is~~~dC~~v~ 91 (91)
T 1t12_A 79 YKISPSTDCSKVQ 91 (91)
T ss_dssp SCSSSSSCCTTCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999996
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.96 E-value=8.7e-31 Score=171.14 Aligned_cols=89 Identities=38% Similarity=0.908 Sum_probs=83.4
Q ss_pred CCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCCC-CCHHHHhhhhhccCCCCCC
Q 043898 28 ISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKMN-PNSQLAQALPTNCGITLPV 106 (118)
Q Consensus 28 ~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~~-in~~~a~~LP~~Cgv~~~~ 106 (118)
++|+++...|.||++|++++++ |+++||++++++++.++|+.|||..|+|+++....++ ||.+++.+||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY 79 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSS
T ss_pred CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999998855 9999999999999999999999999999987777774 9999999999999999999
Q ss_pred CCCCCcCCCCC
Q 043898 107 PVSPNVDCSKI 117 (118)
Q Consensus 107 ~i~~~~dC~~i 117 (118)
+|++++||++|
T Consensus 80 ~is~~~dC~~v 90 (90)
T 1bwo_A 80 TISLNIDCSRV 90 (90)
T ss_dssp CCCTTCCGGGC
T ss_pred CCCCCCCCCCC
Confidence 99999999987
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.96 E-value=1.5e-30 Score=170.24 Aligned_cols=90 Identities=33% Similarity=0.830 Sum_probs=84.2
Q ss_pred CCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCC-CCCHHHHhhhhhccCCCCCC
Q 043898 28 ISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKM-NPNSQLAQALPTNCGITLPV 106 (118)
Q Consensus 28 ~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~-~in~~~a~~LP~~Cgv~~~~ 106 (118)
++|+++...|.||++|++++++ |+++||++++++++.++|+.|||..|+|+++....+ +||.+++.+||++||+++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~ 79 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPY 79 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSS
T ss_pred CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCC
Confidence 4799999999999999998855 999999999999999999999999999998777777 49999999999999999999
Q ss_pred CCCCCcCCCCCC
Q 043898 107 PVSPNVDCSKIN 118 (118)
Q Consensus 107 ~i~~~~dC~~i~ 118 (118)
+|++++||++|+
T Consensus 80 ~is~~~dC~~v~ 91 (91)
T 1siy_A 80 KISTSTNCNSIN 91 (91)
T ss_dssp CSCTTSCSSTTC
T ss_pred CCCCCCCCccCC
Confidence 999999999996
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.95 E-value=2.9e-30 Score=169.27 Aligned_cols=91 Identities=33% Similarity=0.822 Sum_probs=84.4
Q ss_pred cCCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCC-CCCHHHHhhhhhccCCCCC
Q 043898 27 AISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKM-NPNSQLAQALPTNCGITLP 105 (118)
Q Consensus 27 ~~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~-~in~~~a~~LP~~Cgv~~~ 105 (118)
+++|+++...|.||++|+++++ .|+++||++++++++.++|+.|||..|+|++.....+ +||.+++.+||++||+++|
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCC
Confidence 3679999999999999999874 5889999999999999999999999999998766667 4999999999999999999
Q ss_pred CCCCCCcCCCCCC
Q 043898 106 VPVSPNVDCSKIN 118 (118)
Q Consensus 106 ~~i~~~~dC~~i~ 118 (118)
|+|++++||++|+
T Consensus 80 ~~is~~~dC~~v~ 92 (92)
T 2alg_A 80 YKISASTNCATVK 92 (92)
T ss_dssp SCSSTTSCGGGCC
T ss_pred CCCCCCCCCccCC
Confidence 9999999999986
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.62 E-value=3.7e-17 Score=103.40 Aligned_cols=70 Identities=24% Similarity=0.484 Sum_probs=59.3
Q ss_pred cCCchhhhcCccccHHHHhCC-CCCCcHhhhHHHHhhhhhcccccCCcccceeeccC---cCCCCCCHHHHhhhhhccCC
Q 043898 27 AISCSDVLKDLRPCVNYLKSG-SGKPPAACCSGASALASTATSTADKKTACGCIKTA---AQKMNPNSQLAQALPTNCGI 102 (118)
Q Consensus 27 ~~~C~~~~~~L~~C~~yl~~~-~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~---~~~~~in~~~a~~LP~~Cgv 102 (118)
+.+|+++...|.||++|++++ .+.|+++||+++|+. | ..|+|.+.. ..+++||.+++.+||++||+
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~--------~--~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv 71 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------D--FACLCGYKNSPWLGSFGVDPELASALPKQCGL 71 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC--------C--HHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc--------C--cCCcCcccCCcchhhcCcCHHHHHHHHHHcCC
Confidence 467999999999999999974 468999999999982 3 389998765 44557999999999999999
Q ss_pred CCCC
Q 043898 103 TLPV 106 (118)
Q Consensus 103 ~~~~ 106 (118)
++||
T Consensus 72 ~~p~ 75 (77)
T 2rkn_A 72 ANAP 75 (77)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 9885
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.42 E-value=3.6e-14 Score=87.52 Aligned_cols=59 Identities=31% Similarity=0.601 Sum_probs=47.6
Q ss_pred cCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCccccee--eccCcCCCCCCHHHHhhhhhccCCCCC
Q 043898 35 KDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGC--IKTAAQKMNPNSQLAQALPTNCGITLP 105 (118)
Q Consensus 35 ~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~~~~~in~~~a~~LP~~Cgv~~~ 105 (118)
+.|.||++|++++ +.|+++||+++|+. ..|+| +++......||.+++.+||++||+++|
T Consensus 5 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG-AKPSGECCGNLRAQ-----------QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTC-CCCCHHHHHHHHHH-----------SSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC-----------CCCCCccccCcccccccCHHHHHHHHHHcCCCCC
Confidence 4789999999987 57999999999972 58999 444222112899999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.36 E-value=9.3e-14 Score=86.10 Aligned_cols=59 Identities=34% Similarity=0.643 Sum_probs=47.5
Q ss_pred cCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCC--CCCHHHHhhhhhccCCCCC
Q 043898 35 KDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKM--NPNSQLAQALPTNCGITLP 105 (118)
Q Consensus 35 ~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~--~in~~~a~~LP~~Cgv~~~ 105 (118)
+.|.||++|++++ ..|+++||+++|+. ..|+|.+.....+ .||.+++.+||++||+++|
T Consensus 6 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 6 GQLTVCTGAIAGG-ARPTAACCSSLRAQ-----------QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp TTHHHHHHHHTTC-CSTTHHHHHHHHHH-----------HHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSC
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC-----------CCCCCccccCcccccccCHHHHHHHHHHcCCCCC
Confidence 3799999999987 57999999999973 4799943222223 2999999999999999876
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=94.47 E-value=0.019 Score=35.94 Aligned_cols=72 Identities=28% Similarity=0.544 Sum_probs=50.1
Q ss_pred CCchhhhcCccccHHHHhCCCCCCcHhhhHHHHhhhhhcccccCCcccceeeccCcCCCCCCHHHHhh-hhhccCCCCCC
Q 043898 28 ISCSDVLKDLRPCVNYLKSGSGKPPAACCSGASALASTATSTADKKTACGCIKTAAQKMNPNSQLAQA-LPTNCGITLPV 106 (118)
Q Consensus 28 ~~C~~~~~~L~~C~~yl~~~~~~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C~~~~~~~~~in~~~a~~-LP~~Cgv~~~~ 106 (118)
..|. +|..|.+-+.+. ..|...||.-++.+.+. .-++|+|-...+.++ +|.....+ |-..||...|
T Consensus 6 ~~CP----kLgvCanvL~g~-~~~~~~CC~Ll~GL~dl------eAAvCLCtaik~Lgi-lnlpv~L~llln~Cgk~~P- 72 (80)
T 1hyp_A 6 PSCP----DLSICLNILGGS-LGTVDDCCALIGGLGDI------EAIVCLCIQLRALGI-LNLNRNLQLILNSCGRSYP- 72 (80)
T ss_dssp CCSC----CCGGGGGGGGTC-CTTHHHHHHHHHTSCHH------HHHHHHHHHHHHHTC-SCHHHHHHHHHHHTTCSSC-
T ss_pred CCCC----chhHHHHHhCcC-CCCCCccchhhhCcchh------hhhhhhhhhccccce-eecChhHHHHHHHhCCcCc-
Confidence 3476 688899988543 34778999999998754 236899963222233 57766554 6678999988
Q ss_pred CCCCCcCCC
Q 043898 107 PVSPNVDCS 115 (118)
Q Consensus 107 ~i~~~~dC~ 115 (118)
+.|.|.
T Consensus 73 ---~gF~C~ 78 (80)
T 1hyp_A 73 ---SNATCP 78 (80)
T ss_dssp ---CCCCCS
T ss_pred ---CCCCCC
Confidence 777775
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=86.83 E-value=0.033 Score=44.40 Aligned_cols=50 Identities=18% Similarity=0.514 Sum_probs=30.9
Q ss_pred HhhhHHHHhhhhhcccccCCcccceee--ccCcC-------C-C--CCCHHHHhhhhhccCCCCC--CCCCC
Q 043898 53 AACCSGASALASTATSTADKKTACGCI--KTAAQ-------K-M--NPNSQLAQALPTNCGITLP--VPVSP 110 (118)
Q Consensus 53 ~~CC~~l~~~~~~a~t~~dr~~~C~C~--~~~~~-------~-~--~in~~~a~~LP~~Cgv~~~--~~i~~ 110 (118)
.+||+.|+.+. .+..|+|- +..+. + . ..-..+|..||..||+..| .+|++
T Consensus 429 ~~cc~~l~~~~--------~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFE--------NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGT--------TCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCCCC-
T ss_pred HHHHHHHHhCC--------cccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCCccC
Confidence 58999999974 12567773 32211 0 1 1114559999999999866 45544
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=67.16 E-value=2 Score=27.70 Aligned_cols=66 Identities=24% Similarity=0.503 Sum_probs=41.8
Q ss_pred CCchhhh--cC-ccccHHHHhCCC----C--------CCcHhhhHHHHhhhhhcccccCCccccee--eccCc-CCCC--
Q 043898 28 ISCSDVL--KD-LRPCVNYLKSGS----G--------KPPAACCSGASALASTATSTADKKTACGC--IKTAA-QKMN-- 87 (118)
Q Consensus 28 ~~C~~~~--~~-L~~C~~yl~~~~----~--------~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~-~~~~-- 87 (118)
-.|..-+ .. |.+|-.|+.-.. + ..-..||.-|+.+. .-|.| ++..+ ..+.
T Consensus 9 q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~----------~~CrC~al~~~~Q~q~~g~ 78 (103)
T 1s6d_A 9 SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD----------EKCMCPAIMMMLNEPMWIR 78 (103)
T ss_dssp SSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSC----------GGGSSHHHHHHTTSTTCSS
T ss_pred cccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcC----------cccCcHHHHHHHHHHhcch
Confidence 4476443 24 999999997420 1 13478999999975 35666 43332 2221
Q ss_pred ---CCHHHHhhhhhccCCC
Q 043898 88 ---PNSQLAQALPTNCGIT 103 (118)
Q Consensus 88 ---in~~~a~~LP~~Cgv~ 103 (118)
=...+|..||..||++
T Consensus 79 q~~~~~q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 79 MRDQVMSMAHNLPIECNLM 97 (103)
T ss_dssp THHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHhcHHhcCCC
Confidence 1245678899999996
No 13
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=39.79 E-value=5.9 Score=26.42 Aligned_cols=69 Identities=17% Similarity=0.517 Sum_probs=42.3
Q ss_pred cCCchhhh--cCccccHHHHhCC---C---CCC-----------cHhhhHHHHhhhhhcccccCCccccee--eccCc--
Q 043898 27 AISCSDVL--KDLRPCVNYLKSG---S---GKP-----------PAACCSGASALASTATSTADKKTACGC--IKTAA-- 83 (118)
Q Consensus 27 ~~~C~~~~--~~L~~C~~yl~~~---~---~~P-----------s~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~-- 83 (118)
.-.|..-+ ..|.+|-.|+.-. . +.+ -..||..|+.+.+ + ..|.| ++..+
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~------~--~qCrCeaL~q~~Q~ 84 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMEN------T--QGCMCEALQQIMEN 84 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSC------C--CTTHHHHHHHHHHH
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhcc------C--CCccCHHHHHHHHH
Confidence 34576533 4699999999742 0 001 2579999999831 1 35555 44333
Q ss_pred --CCCC---CC---HHHHhhhhhccCCC
Q 043898 84 --QKMN---PN---SQLAQALPTNCGIT 103 (118)
Q Consensus 84 --~~~~---in---~~~a~~LP~~Cgv~ 103 (118)
..+. .. +.+|..||..||+.
T Consensus 85 qq~q~~gqq~~~~~~q~A~~LP~~C~i~ 112 (127)
T 1w2q_A 85 QCDRLQDRQMVQQFKRELMSLPQQCNFR 112 (127)
T ss_dssp SCTTTTTSTTHHHHHHHHHHHHHHHTCC
T ss_pred HHhhhhhHHHHHHHHHHHHHhHHhcCCC
Confidence 2232 22 45688999999993
No 14
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=31.08 E-value=17 Score=23.51 Aligned_cols=58 Identities=21% Similarity=0.624 Sum_probs=36.3
Q ss_pred CccccHHHHhC----CC--CCCc-------HhhhHHHHhhhhhcccccCCccccee--eccCc-------CCCC---C--
Q 043898 36 DLRPCVNYLKS----GS--GKPP-------AACCSGASALASTATSTADKKTACGC--IKTAA-------QKMN---P-- 88 (118)
Q Consensus 36 ~L~~C~~yl~~----~~--~~Ps-------~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~-------~~~~---i-- 88 (118)
.|..|..||.- +. ..+. ..||+.|+.+. ..|.| ++..+ ..+. +
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~----------~~CrC~aL~~~v~~~~qq~~~~~~~~~~~ 86 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMD----------ESCRCEGLRMMMRMMQQKEMQPRGEQMRR 86 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSC----------HHHHHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCC----------cCccCHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 58999999862 11 1111 35999999986 35666 33222 1111 1
Q ss_pred CHHHHhhhhhccCCC
Q 043898 89 NSQLAQALPTNCGIT 103 (118)
Q Consensus 89 n~~~a~~LP~~Cgv~ 103 (118)
-+.+|..||+.||+.
T Consensus 87 ~~q~A~~LP~~C~i~ 101 (114)
T 2lvf_A 87 MMRLAENIPSRCNLS 101 (114)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHhChHhcCCC
Confidence 134688999999997
No 15
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=26.88 E-value=28 Score=20.68 Aligned_cols=42 Identities=29% Similarity=0.570 Sum_probs=27.5
Q ss_pred cHhhhHHHHhhhhhcccccCCccccee--eccCc------CC-CC-----CCHHHHhhhhhccCCC
Q 043898 52 PAACCSGASALASTATSTADKKTACGC--IKTAA------QK-MN-----PNSQLAQALPTNCGIT 103 (118)
Q Consensus 52 s~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~------~~-~~-----in~~~a~~LP~~Cgv~ 103 (118)
-..||+.|+.+. .-|.| ++..+ .. ++ =.+.++..||..||+.
T Consensus 7 ~qqCC~eL~~~~----------~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~ 62 (72)
T 2ds2_B 7 LRQCCNQLRQVD----------RPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIP 62 (72)
T ss_dssp HHHHHHHHTTSC----------GGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHhcC----------ccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCC
Confidence 367999999975 35555 44332 11 21 1356788999999997
No 16
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=26.12 E-value=38 Score=22.44 Aligned_cols=61 Identities=18% Similarity=0.365 Sum_probs=38.0
Q ss_pred cCccccHHHHhCC---CCCC---cHhhhHHHHhhhhhcccccCCcccceee--ccCc----------------CCCC---
Q 043898 35 KDLRPCVNYLKSG---SGKP---PAACCSGASALASTATSTADKKTACGCI--KTAA----------------QKMN--- 87 (118)
Q Consensus 35 ~~L~~C~~yl~~~---~~~P---s~~CC~~l~~~~~~a~t~~dr~~~C~C~--~~~~----------------~~~~--- 87 (118)
..|..|..||... ...| ...||+.|+.+. .-|.|- ...+ ..++
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~----------~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCr 84 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS----------EWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCR 84 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSC----------TTTHHHHHHHHHHHHHHHC---------CCSTTCC
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcC----------cccchHHHHHHHHhhhhhhhhhccccchhhccCCc
Confidence 3588999999632 1223 357999999975 467773 2111 1110
Q ss_pred --CCHHHHhhhhhccCCCCC
Q 043898 88 --PNSQLAQALPTNCGITLP 105 (118)
Q Consensus 88 --in~~~a~~LP~~Cgv~~~ 105 (118)
.-...|..||..||+.++
T Consensus 85 re~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 85 REVVKLTAASITAVCRLPIV 104 (124)
T ss_dssp HHHHHHHHTTHHHHTTCCEE
T ss_pred HHHHHHHHHhchhhcCCCCC
Confidence 111257889999999866
No 17
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=23.28 E-value=46 Score=21.88 Aligned_cols=68 Identities=28% Similarity=0.639 Sum_probs=42.3
Q ss_pred Cchhhh--cCccccHHHHhCC---CC-------CC-----------cHhhhHHHHhhhhhcccccCCccccee--eccCc
Q 043898 29 SCSDVL--KDLRPCVNYLKSG---SG-------KP-----------PAACCSGASALASTATSTADKKTACGC--IKTAA 83 (118)
Q Consensus 29 ~C~~~~--~~L~~C~~yl~~~---~~-------~P-----------s~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~ 83 (118)
.|..-+ ..|.+|-.|+.-. .. .| -..||..|+.+. ..|.| ++..+
T Consensus 17 ~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~----------~~C~C~aL~~~v 86 (125)
T 1psy_A 17 QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR----------DECQCEAIKYIA 86 (125)
T ss_dssp SHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCC----------SSHHHHHHHHHH
T ss_pred ccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcC----------cccccHHHHHHH
Confidence 477544 4799999999742 00 12 257999999974 35555 54332
Q ss_pred ------CCCC---C--CHHHHhhhhhccCCCCCC
Q 043898 84 ------QKMN---P--NSQLAQALPTNCGITLPV 106 (118)
Q Consensus 84 ------~~~~---i--n~~~a~~LP~~Cgv~~~~ 106 (118)
..+. + -+.+|..||..||+.-+|
T Consensus 87 ~~~~qQgq~~gqq~~~~~q~A~~LP~~C~i~C~~ 120 (125)
T 1psy_A 87 EDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMR 120 (125)
T ss_dssp HHHHHHTTCCTTCSHHHHHHHHHHHHHHTCSTTT
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhhHHHcCCcCCC
Confidence 1121 1 255678899999993333
No 18
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=22.41 E-value=20 Score=21.43 Aligned_cols=46 Identities=26% Similarity=0.463 Sum_probs=29.5
Q ss_pred CCcHhhhHHHHhhhhhcccccCCccccee--eccCc------CCCC-----CCHHHHhhhhhccCCCCC
Q 043898 50 KPPAACCSGASALASTATSTADKKTACGC--IKTAA------QKMN-----PNSQLAQALPTNCGITLP 105 (118)
Q Consensus 50 ~Ps~~CC~~l~~~~~~a~t~~dr~~~C~C--~~~~~------~~~~-----in~~~a~~LP~~Cgv~~~ 105 (118)
..-..||+-|+.+. .-|.| ++..+ ..++ -...++..||..||+..+
T Consensus 9 ~~~qqCC~qL~~~~----------~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 9 WLREQCCNELYQED----------QVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp SCTHHHHHHHHTSC----------GGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHHHHhCC----------cccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 45579999999975 35666 43321 1132 124567789999999743
Done!