Query 043900
Match_columns 953
No_of_seqs 960 out of 6231
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 09:22:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043900.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043900hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5E-107 1E-111 1022.2 63.9 874 3-941 68-956 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.6E-59 5.6E-64 589.4 32.6 570 27-609 68-657 (968)
3 KOG1187 Serine/threonine prote 100.0 3.2E-48 7E-53 421.6 25.4 290 617-939 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 1.2E-46 2.6E-51 381.8 17.7 252 633-932 81-335 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1E-45 2.2E-50 398.1 23.7 261 634-943 44-310 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-45 2.5E-50 393.3 15.0 257 633-940 208-465 (468)
7 KOG0591 NIMA (never in mitosis 100.0 9.6E-46 2.1E-50 357.6 8.0 263 631-935 19-284 (375)
8 KOG0615 Serine/threonine prote 100.0 7.4E-45 1.6E-49 370.2 14.3 253 630-931 171-436 (475)
9 KOG0595 Serine/threonine-prote 100.0 2E-44 4.4E-49 368.2 16.6 201 629-850 8-216 (429)
10 KOG1026 Nerve growth factor re 100.0 1.4E-44 3.1E-49 403.6 13.6 272 632-944 487-770 (774)
11 KOG0575 Polo-like serine/threo 100.0 9.4E-44 2E-48 381.7 19.0 248 631-931 18-268 (592)
12 KOG0593 Predicted protein kina 100.0 6.2E-44 1.3E-48 348.6 13.3 272 631-931 2-283 (396)
13 KOG0472 Leucine-rich repeat pr 100.0 5.7E-47 1.2E-51 382.7 -13.1 458 44-549 37-539 (565)
14 KOG0472 Leucine-rich repeat pr 100.0 2.6E-47 5.6E-52 385.2 -16.5 468 3-528 67-541 (565)
15 KOG0659 Cdk activating kinase 100.0 2.3E-42 5E-47 332.4 17.5 277 631-932 2-281 (318)
16 KOG0193 Serine/threonine prote 100.0 6.6E-43 1.4E-47 372.5 14.8 267 625-940 386-657 (678)
17 KOG0196 Tyrosine kinase, EPH ( 100.0 3.2E-43 6.9E-48 383.2 10.8 271 619-938 608-893 (996)
18 KOG0661 MAPK related serine/th 100.0 3.6E-43 7.8E-48 364.3 9.7 276 629-932 8-291 (538)
19 KOG0600 Cdc2-related protein k 100.0 5.6E-42 1.2E-46 358.1 18.1 278 630-931 116-399 (560)
20 KOG0198 MEKK and related serin 100.0 7.6E-42 1.6E-46 355.6 16.7 260 630-934 16-278 (313)
21 KOG0582 Ste20-like serine/thre 100.0 2.4E-41 5.3E-46 347.9 18.2 263 630-931 25-292 (516)
22 KOG0598 Ribosomal protein S6 k 100.0 3.2E-41 7E-46 342.5 15.6 202 629-850 23-227 (357)
23 KOG0592 3-phosphoinositide-dep 100.0 2.8E-41 6E-46 355.9 15.6 254 627-931 69-337 (604)
24 KOG0578 p21-activated serine/t 100.0 2.8E-41 6E-46 359.8 15.6 250 631-931 273-522 (550)
25 KOG1095 Protein tyrosine kinas 100.0 5E-41 1.1E-45 389.4 17.3 271 633-946 694-971 (1025)
26 KOG4194 Membrane glycoprotein 100.0 2.8E-42 6E-47 363.7 5.4 388 31-523 55-447 (873)
27 KOG0660 Mitogen-activated prot 100.0 7.4E-41 1.6E-45 338.2 13.7 291 625-932 16-310 (359)
28 KOG0663 Protein kinase PITSLRE 100.0 1.6E-40 3.5E-45 329.2 15.3 281 630-931 75-360 (419)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.5E-40 1.6E-44 362.7 21.7 271 630-938 6-336 (338)
30 KOG0201 Serine/threonine prote 100.0 3.2E-41 7E-46 347.3 9.7 250 630-931 12-262 (467)
31 KOG0597 Serine-threonine prote 100.0 2.2E-40 4.7E-45 348.4 13.6 247 631-931 2-250 (808)
32 KOG3653 Transforming growth fa 100.0 1.9E-39 4.1E-44 336.4 19.7 283 631-942 210-509 (534)
33 KOG2345 Serine/threonine prote 100.0 1.9E-40 4E-45 315.9 10.5 271 630-936 20-300 (302)
34 KOG4721 Serine/threonine prote 100.0 2.3E-40 4.9E-45 347.8 11.2 244 634-938 127-370 (904)
35 KOG1094 Discoidin domain recep 100.0 1.5E-39 3.3E-44 343.2 16.7 263 632-936 539-804 (807)
36 KOG0658 Glycogen synthase kina 100.0 2.1E-40 4.5E-45 335.6 9.7 287 632-939 25-315 (364)
37 KOG0583 Serine/threonine prote 100.0 4.4E-39 9.5E-44 350.7 20.0 256 628-937 14-279 (370)
38 KOG4194 Membrane glycoprotein 100.0 5.6E-41 1.2E-45 353.9 4.5 390 6-476 54-448 (873)
39 KOG0194 Protein tyrosine kinas 100.0 1.3E-39 2.8E-44 353.8 14.4 261 630-941 156-425 (474)
40 KOG4257 Focal adhesion tyrosin 100.0 3.1E-39 6.7E-44 342.6 14.9 254 634-938 392-651 (974)
41 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-38 2.3E-43 330.3 18.0 259 628-933 94-373 (576)
42 KOG0588 Serine/threonine prote 100.0 4.5E-39 9.7E-44 346.0 15.6 249 630-932 11-263 (786)
43 KOG0605 NDR and related serine 100.0 8.7E-39 1.9E-43 337.8 16.8 254 629-930 139-443 (550)
44 KOG1989 ARK protein kinase fam 100.0 7.3E-39 1.6E-43 360.2 17.3 266 631-940 37-315 (738)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 4.5E-38 9.7E-43 343.1 22.8 271 631-934 5-303 (304)
46 cd05106 PTKc_CSF-1R Catalytic 100.0 3.1E-38 6.7E-43 352.6 21.5 269 630-937 37-373 (374)
47 PHA02988 hypothetical protein; 100.0 6.7E-38 1.5E-42 336.8 22.3 252 636-938 25-281 (283)
48 KOG2052 Activin A type IB rece 100.0 7.8E-38 1.7E-42 321.9 21.3 273 629-939 209-506 (513)
49 KOG4278 Protein tyrosine kinas 100.0 3E-39 6.6E-44 341.8 11.2 255 632-936 268-523 (1157)
50 KOG0594 Protein kinase PCTAIRE 100.0 3.2E-38 6.9E-43 321.2 18.2 287 630-936 10-308 (323)
51 cd05104 PTKc_Kit Catalytic dom 100.0 5.9E-38 1.3E-42 350.8 21.7 268 630-936 34-374 (375)
52 cd05631 STKc_GRK4 Catalytic do 100.0 6E-38 1.3E-42 338.3 21.0 252 632-931 1-260 (285)
53 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.2E-38 6.9E-43 350.2 19.1 284 632-932 1-290 (338)
54 KOG0616 cAMP-dependent protein 100.0 2.2E-38 4.8E-43 309.5 14.6 197 631-850 44-243 (355)
55 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.7E-38 1E-42 342.6 18.9 283 629-931 3-287 (303)
56 KOG0033 Ca2+/calmodulin-depend 100.0 6.6E-40 1.4E-44 310.5 3.7 252 630-931 10-266 (355)
57 cd07848 STKc_CDKL5 Catalytic d 100.0 7.1E-38 1.5E-42 338.7 19.5 279 631-931 1-283 (287)
58 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-37 2.4E-42 337.8 20.8 277 631-931 1-286 (290)
59 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-37 3.3E-42 335.5 21.1 265 631-935 5-282 (283)
60 PF07714 Pkinase_Tyr: Protein 100.0 4.9E-38 1.1E-42 333.7 16.6 251 635-933 3-259 (259)
61 cd05054 PTKc_VEGFR Catalytic d 100.0 1.7E-37 3.8E-42 341.9 20.7 270 631-938 7-335 (337)
62 KOG0589 Serine/threonine prote 100.0 3.1E-38 6.8E-43 336.0 14.1 253 631-933 4-259 (426)
63 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.1E-37 4.5E-42 330.7 20.3 256 631-936 5-265 (266)
64 cd05612 STKc_PRKX_like Catalyt 100.0 6.3E-38 1.4E-42 339.1 16.3 246 631-932 1-254 (291)
65 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-37 5.5E-42 340.7 21.4 200 630-850 4-204 (331)
66 KOG1025 Epidermal growth facto 100.0 2.8E-38 6E-43 345.5 13.4 256 633-938 698-959 (1177)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-37 4.2E-42 334.9 19.4 278 630-931 4-284 (288)
68 cd05108 PTKc_EGFR Catalytic do 100.0 2E-37 4.4E-42 339.6 19.7 259 631-939 7-271 (316)
69 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-37 8.3E-42 344.5 21.7 269 630-937 36-398 (400)
70 cd05571 STKc_PKB Catalytic dom 100.0 9.2E-38 2E-42 342.9 16.4 242 637-931 1-250 (323)
71 PLN00034 mitogen-activated pro 100.0 3.9E-37 8.4E-42 342.5 21.5 249 631-932 74-328 (353)
72 cd05093 PTKc_TrkB Catalytic do 100.0 7.3E-37 1.6E-41 330.7 22.8 269 631-939 5-282 (288)
73 cd05062 PTKc_IGF-1R Catalytic 100.0 4.3E-37 9.3E-42 330.7 20.7 266 629-934 4-276 (277)
74 cd05111 PTK_HER3 Pseudokinase 100.0 7.1E-37 1.5E-41 329.0 22.3 259 631-939 7-271 (279)
75 KOG0694 Serine/threonine prote 100.0 2E-37 4.3E-42 336.7 17.7 244 629-926 366-613 (694)
76 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-37 3.8E-42 342.6 17.4 254 631-932 1-257 (333)
77 KOG0580 Serine/threonine prote 100.0 5.1E-38 1.1E-42 298.2 11.1 251 629-932 20-273 (281)
78 PTZ00267 NIMA-related protein 100.0 2.8E-37 6.1E-42 355.7 19.3 254 632-931 68-322 (478)
79 cd05052 PTKc_Abl Catalytic dom 100.0 6E-37 1.3E-41 326.8 20.4 256 631-936 6-262 (263)
80 PTZ00283 serine/threonine prot 100.0 4.2E-37 9.1E-42 353.8 20.6 265 627-932 28-297 (496)
81 KOG0574 STE20-like serine/thre 100.0 2.2E-39 4.8E-44 315.3 1.3 249 633-932 35-283 (502)
82 cd08228 STKc_Nek6 Catalytic do 100.0 7.5E-37 1.6E-41 327.1 21.0 262 631-937 2-266 (267)
83 PTZ00263 protein kinase A cata 100.0 1.7E-37 3.7E-42 341.5 16.2 246 630-931 17-270 (329)
84 cd05094 PTKc_TrkC Catalytic do 100.0 9.3E-37 2E-41 330.4 21.5 271 631-941 5-287 (291)
85 cd05035 PTKc_Axl_like Catalyti 100.0 1.8E-36 3.8E-41 325.5 23.4 265 633-936 1-272 (273)
86 cd05075 PTKc_Axl Catalytic dom 100.0 1E-36 2.2E-41 327.1 21.5 265 633-936 1-271 (272)
87 cd05049 PTKc_Trk Catalytic dom 100.0 7.3E-37 1.6E-41 329.7 20.1 264 631-934 5-279 (280)
88 cd05595 STKc_PKB_beta Catalyti 100.0 3.7E-37 8.1E-42 337.8 17.8 242 637-931 1-250 (323)
89 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-36 2.3E-41 335.6 21.4 200 630-850 4-204 (333)
90 cd05585 STKc_YPK1_like Catalyt 100.0 2.9E-37 6.3E-42 337.3 16.8 240 639-931 1-246 (312)
91 cd05033 PTKc_EphR Catalytic do 100.0 1E-36 2.2E-41 325.8 20.6 258 630-936 3-265 (266)
92 KOG0667 Dual-specificity tyros 100.0 2.7E-37 5.8E-42 336.4 16.3 201 631-854 186-394 (586)
93 KOG0611 Predicted serine/threo 100.0 1E-37 2.2E-42 315.3 11.7 248 630-932 52-303 (668)
94 PRK13184 pknD serine/threonine 100.0 8.7E-37 1.9E-41 357.8 21.2 272 631-940 2-294 (932)
95 KOG0618 Serine/threonine phosp 100.0 4.5E-40 9.8E-45 366.0 -6.0 482 8-526 2-487 (1081)
96 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.6E-37 1E-41 327.5 17.3 257 629-936 4-261 (261)
97 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-36 2.3E-41 328.8 20.1 271 632-937 4-282 (283)
98 cd05045 PTKc_RET Catalytic dom 100.0 1.7E-36 3.7E-41 328.3 21.7 267 632-938 1-288 (290)
99 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-36 2.2E-41 329.1 19.8 270 631-936 4-283 (284)
100 cd05593 STKc_PKB_gamma Catalyt 100.0 4.9E-37 1.1E-41 337.5 17.3 243 637-932 1-251 (328)
101 PHA03212 serine/threonine kina 100.0 8.5E-37 1.8E-41 341.8 19.4 270 631-931 92-375 (391)
102 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-36 3.2E-41 323.6 20.2 255 630-935 5-260 (261)
103 PTZ00426 cAMP-dependent protei 100.0 3.9E-37 8.4E-42 339.0 16.2 247 630-932 29-284 (340)
104 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-36 4.8E-41 325.5 21.7 260 630-939 6-271 (279)
105 cd05084 PTKc_Fes Catalytic dom 100.0 2.1E-36 4.5E-41 320.6 20.7 249 637-934 1-251 (252)
106 cd05043 PTK_Ryk Pseudokinase d 100.0 2.5E-36 5.4E-41 325.4 21.6 269 630-939 5-279 (280)
107 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-36 3.5E-41 327.4 20.1 265 631-935 5-282 (283)
108 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-36 4.1E-41 327.9 20.2 279 632-931 1-284 (288)
109 cd05032 PTKc_InsR_like Catalyt 100.0 1.6E-36 3.4E-41 326.5 19.1 265 630-934 5-276 (277)
110 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.4E-36 5.1E-41 324.8 20.3 262 630-934 5-276 (277)
111 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.7E-36 5.8E-41 320.5 20.4 251 631-933 4-255 (256)
112 cd05605 STKc_GRK4_like Catalyt 100.0 2.5E-36 5.3E-41 325.8 20.4 253 632-932 1-261 (285)
113 cd05068 PTKc_Frk_like Catalyti 100.0 3E-36 6.5E-41 321.1 20.5 255 630-935 5-260 (261)
114 cd05608 STKc_GRK1 Catalytic do 100.0 3.1E-36 6.6E-41 324.1 20.7 248 639-931 1-256 (280)
115 cd05053 PTKc_FGFR Catalytic do 100.0 2.1E-36 4.6E-41 328.3 19.6 268 630-937 11-292 (293)
116 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-36 7E-41 323.4 20.8 247 639-932 1-250 (277)
117 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-36 2.7E-41 334.2 18.0 245 633-931 1-256 (324)
118 KOG4279 Serine/threonine prote 100.0 1.9E-37 4.1E-42 332.3 11.0 246 637-931 581-831 (1226)
119 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-36 8.6E-41 325.0 21.6 268 629-936 4-278 (288)
120 KOG0599 Phosphorylase kinase g 100.0 4.7E-37 1E-41 295.5 12.4 254 629-932 15-283 (411)
121 KOG0199 ACK and related non-re 100.0 3E-37 6.5E-42 331.8 12.2 252 633-933 112-369 (1039)
122 cd08229 STKc_Nek7 Catalytic do 100.0 3.2E-36 6.8E-41 322.3 19.9 262 631-937 2-266 (267)
123 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.8E-36 1.3E-40 331.4 22.5 271 630-938 6-341 (343)
124 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.8E-36 1E-40 335.3 21.9 270 629-937 35-400 (401)
125 cd05594 STKc_PKB_alpha Catalyt 100.0 7.6E-37 1.7E-41 336.1 15.2 243 637-932 1-252 (325)
126 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.1E-36 1.8E-40 319.1 22.6 262 631-937 2-266 (267)
127 cd05092 PTKc_TrkA Catalytic do 100.0 3.4E-36 7.4E-41 324.0 19.7 264 631-934 5-279 (280)
128 cd05055 PTKc_PDGFR Catalytic d 100.0 4.3E-36 9.4E-41 326.4 20.5 259 631-936 35-301 (302)
129 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-36 4.6E-41 323.5 17.8 255 630-932 8-265 (267)
130 cd05626 STKc_LATS2 Catalytic d 100.0 2.1E-36 4.5E-41 339.9 18.6 201 632-850 2-250 (381)
131 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-36 4.8E-41 330.7 18.1 242 637-931 1-247 (316)
132 PTZ00036 glycogen synthase kin 100.0 2.1E-36 4.5E-41 344.3 18.3 286 630-938 65-359 (440)
133 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-36 2.5E-41 340.7 16.0 253 631-931 1-295 (364)
134 cd05628 STKc_NDR1 Catalytic do 100.0 2.5E-36 5.4E-41 337.1 18.4 202 631-850 1-238 (363)
135 cd05591 STKc_nPKC_epsilon Cata 100.0 1.8E-36 3.9E-41 332.5 16.9 243 637-932 1-254 (321)
136 cd05091 PTKc_Ror2 Catalytic do 100.0 4.9E-36 1.1E-40 323.7 19.9 264 632-935 6-282 (283)
137 cd05089 PTKc_Tie1 Catalytic do 100.0 7.2E-36 1.6E-40 324.4 21.3 268 631-941 2-280 (297)
138 cd05590 STKc_nPKC_eta Catalyti 100.0 1.9E-36 4E-41 331.8 16.8 238 637-927 1-242 (320)
139 cd05587 STKc_cPKC Catalytic do 100.0 2.4E-36 5.2E-41 332.0 17.6 242 632-926 1-246 (324)
140 cd07853 STKc_NLK Catalytic dom 100.0 3.1E-36 6.7E-41 337.8 18.7 283 632-932 1-288 (372)
141 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.8E-36 1E-40 327.7 19.8 277 631-931 6-285 (309)
142 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.7E-37 1.9E-41 340.2 14.1 254 631-932 1-285 (350)
143 cd07876 STKc_JNK2 Catalytic do 100.0 7.3E-36 1.6E-40 333.3 21.6 205 628-851 18-225 (359)
144 cd05071 PTKc_Src Catalytic dom 100.0 7.9E-36 1.7E-40 317.8 20.7 254 631-936 6-260 (262)
145 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-35 2.4E-40 322.7 22.1 271 631-934 5-294 (295)
146 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.6E-36 1.9E-40 325.0 21.4 272 629-940 13-300 (304)
147 cd05596 STKc_ROCK Catalytic do 100.0 2.2E-36 4.7E-41 337.5 17.0 254 630-932 42-304 (370)
148 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-35 2.4E-40 315.6 21.5 249 638-936 2-255 (257)
149 cd06654 STKc_PAK1 Catalytic do 100.0 5.3E-36 1.2E-40 324.9 19.5 250 631-931 20-269 (296)
150 cd05588 STKc_aPKC Catalytic do 100.0 3.8E-36 8.1E-41 330.8 18.5 248 637-931 1-261 (329)
151 KOG0444 Cytoskeletal regulator 100.0 1.1E-38 2.3E-43 338.2 -1.8 366 52-504 7-375 (1255)
152 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.5E-36 1.6E-40 325.9 20.4 272 630-941 17-304 (307)
153 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-36 8E-41 330.7 18.1 243 637-926 1-250 (329)
154 cd05601 STKc_CRIK Catalytic do 100.0 1E-36 2.3E-41 336.2 13.7 253 631-931 1-262 (330)
155 cd07874 STKc_JNK3 Catalytic do 100.0 4.5E-36 9.7E-41 334.6 19.0 283 628-932 14-311 (355)
156 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-35 2.7E-40 315.6 21.5 251 632-932 1-253 (256)
157 cd05065 PTKc_EphR_B Catalytic 100.0 9E-36 2E-40 319.0 20.4 257 631-936 4-268 (269)
158 cd05619 STKc_nPKC_theta Cataly 100.0 4.3E-36 9.3E-41 328.1 18.1 242 637-931 1-247 (316)
159 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.1E-36 1.3E-40 317.5 18.5 252 631-934 4-256 (256)
160 cd05095 PTKc_DDR2 Catalytic do 100.0 1.5E-35 3.3E-40 321.8 21.8 271 631-934 5-295 (296)
161 cd05616 STKc_cPKC_beta Catalyt 100.0 4.4E-36 9.6E-41 329.8 17.8 242 632-926 1-246 (323)
162 cd06645 STKc_MAP4K3 Catalytic 100.0 5.9E-36 1.3E-40 320.1 18.3 254 630-931 8-264 (267)
163 cd05621 STKc_ROCK2 Catalytic d 100.0 3.1E-36 6.7E-41 335.7 16.8 255 629-932 41-304 (370)
164 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.1E-35 2.3E-40 318.3 20.3 258 630-936 4-267 (268)
165 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-35 2.8E-40 321.2 21.1 265 630-934 4-287 (288)
166 cd05584 STKc_p70S6K Catalytic 100.0 4.8E-36 1E-40 329.3 17.9 242 637-931 2-255 (323)
167 cd05570 STKc_PKC Catalytic dom 100.0 4.2E-36 9.2E-41 328.9 17.4 242 637-931 1-251 (318)
168 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-35 3.8E-40 324.0 22.2 273 630-942 11-299 (314)
169 cd05051 PTKc_DDR Catalytic dom 100.0 2.4E-35 5.2E-40 320.6 23.1 272 630-934 4-295 (296)
170 cd05620 STKc_nPKC_delta Cataly 100.0 4E-36 8.7E-41 328.6 17.1 241 637-930 1-246 (316)
171 KOG0610 Putative serine/threon 100.0 5.2E-36 1.1E-40 306.5 16.4 254 631-931 77-391 (459)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 1.6E-35 3.4E-40 318.7 21.1 250 631-932 1-253 (279)
173 cd05598 STKc_LATS Catalytic do 100.0 1.9E-36 4.2E-41 340.2 14.6 203 631-851 1-247 (376)
174 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-36 6.7E-41 338.5 16.1 202 631-850 1-250 (377)
175 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.1E-35 4.5E-40 314.4 21.7 253 631-935 6-259 (260)
176 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-35 2.3E-40 330.0 20.2 284 626-932 10-298 (343)
177 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-35 2.6E-40 323.3 20.2 266 631-939 7-283 (303)
178 cd07875 STKc_JNK1 Catalytic do 100.0 8.8E-36 1.9E-40 333.2 19.6 205 628-851 21-228 (364)
179 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.1E-35 4.5E-40 318.8 21.7 272 632-936 5-283 (284)
180 cd05614 STKc_MSK2_N N-terminal 100.0 7.9E-36 1.7E-40 329.5 18.9 252 632-931 1-266 (332)
181 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-35 3.5E-40 317.0 20.6 257 637-934 1-268 (269)
182 cd05056 PTKc_FAK Catalytic dom 100.0 1.8E-35 3.9E-40 316.8 20.9 258 631-939 6-268 (270)
183 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-35 3.6E-40 314.5 20.4 247 638-935 2-254 (257)
184 cd06637 STKc_TNIK Catalytic do 100.0 1E-35 2.2E-40 319.2 18.9 258 629-931 4-268 (272)
185 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-35 3E-40 314.9 19.6 251 632-932 1-252 (255)
186 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-35 2.7E-40 315.3 19.3 251 631-933 4-255 (256)
187 cd05060 PTKc_Syk_like Catalyti 100.0 2.9E-35 6.3E-40 312.7 22.0 249 637-936 1-255 (257)
188 PTZ00266 NIMA-related protein 100.0 5.5E-36 1.2E-40 352.2 18.0 262 626-931 8-294 (1021)
189 cd05082 PTKc_Csk Catalytic dom 100.0 2.3E-35 5.1E-40 313.3 21.1 250 631-936 6-256 (256)
190 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-35 5.5E-40 314.5 21.4 253 631-932 2-260 (263)
191 KOG0618 Serine/threonine phosp 100.0 7.8E-39 1.7E-43 356.2 -6.0 484 32-551 2-489 (1081)
192 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-35 5.5E-40 317.3 21.4 259 631-939 7-271 (279)
193 cd06638 STKc_myosinIIIA Cataly 100.0 8.8E-36 1.9E-40 322.3 17.8 270 621-932 8-283 (286)
194 cd05625 STKc_LATS1 Catalytic d 100.0 5E-36 1.1E-40 337.4 16.4 201 632-850 2-250 (382)
195 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.7E-35 8.1E-40 324.2 23.0 272 631-942 12-299 (334)
196 KOG0584 Serine/threonine prote 100.0 1.7E-36 3.7E-41 326.3 11.9 247 635-931 44-295 (632)
197 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2E-35 4.3E-40 319.3 20.3 273 631-936 4-283 (284)
198 PHA03211 serine/threonine kina 100.0 9.7E-36 2.1E-40 336.4 18.4 196 630-849 168-363 (461)
199 PTZ00284 protein kinase; Provi 100.0 1.7E-35 3.7E-40 341.1 20.7 202 625-850 123-347 (467)
200 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-35 3.6E-40 322.0 19.2 252 629-931 33-292 (382)
201 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-35 2.9E-40 326.2 18.7 244 637-927 1-249 (327)
202 cd05058 PTKc_Met_Ron Catalytic 100.0 2.8E-35 6E-40 314.0 20.6 253 637-937 1-260 (262)
203 cd05042 PTKc_Aatyk Catalytic d 100.0 2.2E-35 4.7E-40 316.0 19.8 257 637-934 1-268 (269)
204 cd05630 STKc_GRK6 Catalytic do 100.0 2.8E-35 6.1E-40 317.4 20.8 252 632-931 1-260 (285)
205 cd05069 PTKc_Yes Catalytic dom 100.0 4.3E-35 9.4E-40 311.9 22.0 253 631-935 6-259 (260)
206 cd06643 STKc_SLK Catalytic dom 100.0 2.5E-35 5.4E-40 317.8 20.3 250 633-931 7-261 (282)
207 cd05066 PTKc_EphR_A Catalytic 100.0 2.2E-35 4.8E-40 315.5 19.7 258 630-936 3-266 (267)
208 cd05632 STKc_GRK5 Catalytic do 100.0 3.4E-35 7.4E-40 316.9 21.3 252 633-932 2-261 (285)
209 cd05575 STKc_SGK Catalytic dom 100.0 5.8E-36 1.3E-40 328.8 15.3 238 637-927 1-242 (323)
210 cd05039 PTKc_Csk_like Catalyti 100.0 3E-35 6.5E-40 312.5 20.2 251 630-936 5-256 (256)
211 cd05622 STKc_ROCK1 Catalytic d 100.0 9.4E-36 2E-40 332.2 17.0 205 626-850 38-249 (371)
212 cd06656 STKc_PAK3 Catalytic do 100.0 2E-35 4.3E-40 320.6 19.1 251 630-931 18-268 (297)
213 PF00069 Pkinase: Protein kina 100.0 1.4E-35 3E-40 316.0 17.6 253 633-931 1-256 (260)
214 cd06613 STKc_MAP4K3_like Catal 100.0 2.9E-35 6.4E-40 313.9 20.0 254 631-931 3-259 (262)
215 cd05110 PTKc_HER4 Catalytic do 100.0 2.7E-35 5.9E-40 320.7 20.0 260 630-939 6-271 (303)
216 cd06639 STKc_myosinIIIB Cataly 100.0 2.1E-35 4.6E-40 320.0 19.1 268 622-931 13-286 (291)
217 cd06624 STKc_ASK Catalytic dom 100.0 4E-35 8.6E-40 313.8 20.8 257 628-931 5-264 (268)
218 cd05582 STKc_RSK_N N-terminal 100.0 2.9E-36 6.2E-41 330.6 12.2 239 637-928 2-245 (318)
219 cd06655 STKc_PAK2 Catalytic do 100.0 2.2E-35 4.8E-40 319.9 19.1 250 631-931 19-268 (296)
220 cd05067 PTKc_Lck_Blk Catalytic 100.0 4E-35 8.6E-40 312.3 20.6 254 630-935 5-259 (260)
221 cd05602 STKc_SGK1 Catalytic do 100.0 8E-36 1.7E-40 328.0 15.7 242 637-931 1-246 (325)
222 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-35 3.2E-40 325.2 17.5 243 632-927 1-247 (323)
223 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-35 7.7E-40 320.4 20.2 277 631-932 1-287 (308)
224 cd00192 PTKc Catalytic domain 100.0 6.4E-35 1.4E-39 311.2 21.6 257 637-934 1-262 (262)
225 cd05034 PTKc_Src_like Catalyti 100.0 3.7E-35 8E-40 312.9 19.4 255 630-935 5-260 (261)
226 cd07868 STKc_CDK8 Catalytic do 100.0 5.9E-35 1.3E-39 320.6 21.4 206 636-851 6-219 (317)
227 cd06644 STKc_STK10_LOK Catalyt 100.0 4.8E-35 1E-39 317.3 20.4 252 631-931 12-268 (292)
228 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-34 2.3E-39 308.6 22.7 251 632-931 1-253 (257)
229 KOG0444 Cytoskeletal regulator 100.0 3.1E-38 6.7E-43 334.7 -4.9 370 5-485 8-380 (1255)
230 cd06612 STKc_MST1_2 Catalytic 100.0 4.5E-35 9.7E-40 311.3 19.3 251 630-931 2-252 (256)
231 cd05047 PTKc_Tie Catalytic dom 100.0 1.1E-34 2.3E-39 310.7 22.3 258 637-937 1-269 (270)
232 cd08227 PK_STRAD_alpha Pseudok 100.0 4.6E-35 1E-39 322.4 20.0 285 635-937 2-314 (327)
233 cd05604 STKc_SGK3 Catalytic do 100.0 8.6E-36 1.9E-40 327.8 14.2 242 637-931 1-246 (325)
234 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.6E-35 7.7E-40 319.7 18.9 281 630-937 5-293 (301)
235 cd06611 STKc_SLK_like Catalyti 100.0 2.9E-35 6.3E-40 317.0 17.9 254 630-932 4-262 (280)
236 PHA03207 serine/threonine kina 100.0 1.9E-35 4.2E-40 332.9 17.2 276 630-932 91-375 (392)
237 cd07861 STKc_CDK1_euk Catalyti 100.0 6.8E-35 1.5E-39 315.2 20.7 276 632-931 1-281 (285)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.3E-35 1.1E-39 313.3 19.5 240 638-934 2-274 (274)
239 KOG0577 Serine/threonine prote 100.0 2.1E-36 4.6E-41 319.2 8.1 245 632-931 27-277 (948)
240 cd05627 STKc_NDR2 Catalytic do 100.0 1.4E-35 2.9E-40 331.0 15.0 202 631-850 1-238 (360)
241 cd05041 PTKc_Fes_like Catalyti 100.0 9.6E-35 2.1E-39 307.7 20.7 248 637-934 1-250 (251)
242 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-34 2.4E-39 313.8 21.3 277 631-931 1-282 (286)
243 cd05044 PTKc_c-ros Catalytic d 100.0 6.5E-35 1.4E-39 312.5 19.2 255 637-934 1-268 (269)
244 cd05040 PTKc_Ack_like Catalyti 100.0 8.5E-35 1.8E-39 309.3 19.9 250 637-934 1-256 (257)
245 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-34 2.3E-39 311.6 20.8 249 631-931 1-250 (274)
246 cd08221 STKc_Nek9 Catalytic do 100.0 1.7E-34 3.6E-39 306.8 22.1 251 632-932 1-253 (256)
247 cd06640 STKc_MST4 Catalytic do 100.0 2.1E-34 4.6E-39 309.6 23.0 249 631-932 4-253 (277)
248 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.1E-35 1.5E-39 314.4 19.3 266 621-931 6-278 (282)
249 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.9E-35 1.9E-39 309.4 19.8 240 637-933 1-261 (262)
250 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-34 2.5E-39 311.2 20.7 265 633-936 1-272 (273)
251 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.2E-35 1.8E-39 315.4 19.7 281 629-931 3-287 (291)
252 cd05597 STKc_DMPK_like Catalyt 100.0 4.5E-35 9.8E-40 322.5 17.9 202 631-850 1-210 (331)
253 cd05085 PTKc_Fer Catalytic dom 100.0 1.5E-34 3.3E-39 306.0 21.2 247 637-934 1-249 (250)
254 cd05603 STKc_SGK2 Catalytic do 100.0 2.2E-35 4.8E-40 324.1 15.2 238 637-927 1-242 (321)
255 cd07849 STKc_ERK1_2_like Catal 100.0 6.4E-35 1.4E-39 322.6 19.0 282 630-932 4-292 (336)
256 cd07839 STKc_CDK5 Catalytic do 100.0 5E-35 1.1E-39 316.0 17.7 275 632-931 1-280 (284)
257 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.6E-34 5.7E-39 307.2 23.1 256 637-934 1-267 (268)
258 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.1E-34 4.6E-39 311.2 22.4 264 631-931 1-265 (287)
259 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-35 5E-40 313.5 14.5 240 637-933 1-257 (258)
260 cd05073 PTKc_Hck Catalytic dom 100.0 1.7E-34 3.7E-39 307.3 21.3 254 630-935 5-259 (260)
261 PHA03209 serine/threonine kina 100.0 5.2E-35 1.1E-39 325.2 17.8 193 629-848 64-256 (357)
262 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.3E-35 1.8E-39 312.9 18.8 248 632-932 5-253 (277)
263 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.6E-35 1.6E-39 314.4 18.5 262 631-933 5-267 (284)
264 cd06658 STKc_PAK5 Catalytic do 100.0 5.7E-35 1.2E-39 316.0 17.3 249 633-932 24-272 (292)
265 cd08217 STKc_Nek2 Catalytic do 100.0 1.8E-34 3.9E-39 308.4 20.8 255 632-932 1-262 (265)
266 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-34 2.4E-39 314.4 19.5 278 630-931 4-287 (291)
267 cd06651 STKc_MEKK3 Catalytic d 100.0 2.2E-34 4.7E-39 307.6 21.4 253 631-931 2-260 (266)
268 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-34 2.7E-39 310.0 19.5 250 632-931 1-263 (267)
269 cd07867 STKc_CDC2L6 Catalytic 100.0 2.9E-34 6.2E-39 315.4 22.8 206 636-851 6-219 (317)
270 KOG0579 Ste20-like serine/thre 100.0 3.3E-36 7.2E-41 319.4 6.8 251 632-931 33-288 (1187)
271 KOG4717 Serine/threonine prote 100.0 5.8E-35 1.3E-39 303.6 15.8 249 630-931 17-269 (864)
272 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-34 3.1E-39 309.8 19.5 255 632-934 1-268 (269)
273 cd08218 STKc_Nek1 Catalytic do 100.0 2.6E-34 5.6E-39 305.3 21.2 250 632-931 1-252 (256)
274 cd05624 STKc_MRCK_beta Catalyt 100.0 6.5E-35 1.4E-39 321.3 17.0 202 631-850 1-210 (331)
275 KOG0604 MAP kinase-activated p 100.0 2.2E-35 4.7E-40 288.3 11.4 259 628-931 58-321 (400)
276 KOG0596 Dual specificity; seri 100.0 2.4E-35 5.3E-40 310.7 12.6 253 630-931 360-626 (677)
277 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-34 3.8E-39 310.3 19.5 261 629-931 4-271 (275)
278 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.2E-34 4.7E-39 311.3 20.2 255 631-932 1-262 (286)
279 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-34 3E-39 309.2 18.1 254 631-931 1-256 (265)
280 KOG0666 Cyclin C-dependent kin 100.0 1.8E-35 3.9E-40 290.0 10.1 210 629-851 22-243 (438)
281 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-34 2.4E-39 319.7 17.8 202 631-850 1-210 (332)
282 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.6E-35 2.1E-39 314.2 17.0 277 631-931 1-282 (286)
283 smart00219 TyrKc Tyrosine kina 100.0 3.9E-34 8.4E-39 304.4 21.3 252 633-933 1-258 (258)
284 cd08220 STKc_Nek8 Catalytic do 100.0 3.4E-34 7.3E-39 304.5 20.6 249 632-931 1-252 (256)
285 cd05046 PTK_CCK4 Pseudokinase 100.0 2.8E-34 6.1E-39 308.6 20.1 263 631-934 5-274 (275)
286 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-34 6.1E-39 305.1 19.8 251 631-933 4-255 (256)
287 cd06631 STKc_YSK4 Catalytic do 100.0 3E-34 6.4E-39 306.6 20.0 251 632-931 1-261 (265)
288 KOG1024 Receptor-like protein 100.0 5.5E-35 1.2E-39 294.9 13.1 276 624-940 277-559 (563)
289 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.8E-34 6E-39 308.1 19.5 255 632-931 2-268 (272)
290 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.6E-34 7.8E-39 306.4 20.3 259 631-931 1-263 (267)
291 cd06647 STKc_PAK_I Catalytic d 100.0 2.5E-34 5.4E-39 311.3 19.2 251 631-932 19-269 (293)
292 cd05083 PTKc_Chk Catalytic dom 100.0 2.4E-34 5.2E-39 305.1 18.7 247 631-935 6-253 (254)
293 cd05609 STKc_MAST Catalytic do 100.0 2.5E-34 5.3E-39 313.6 19.1 257 631-935 1-273 (305)
294 KOG4250 TANK binding protein k 100.0 7.9E-35 1.7E-39 317.3 14.6 288 633-940 15-314 (732)
295 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-34 3.9E-39 312.9 17.5 249 633-932 23-271 (297)
296 cd06652 STKc_MEKK2 Catalytic d 100.0 6.6E-34 1.4E-38 303.8 21.6 253 631-931 2-260 (265)
297 cd07832 STKc_CCRK Catalytic do 100.0 5.4E-34 1.2E-38 308.4 21.1 274 632-931 1-281 (286)
298 cd05586 STKc_Sck1_like Catalyt 100.0 5.6E-35 1.2E-39 322.2 13.5 241 639-931 1-252 (330)
299 cd07860 STKc_CDK2_3 Catalytic 100.0 3.4E-34 7.5E-39 309.5 18.9 275 632-931 1-280 (284)
300 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.1E-34 8.8E-39 304.5 19.1 239 637-934 1-259 (259)
301 cd05574 STKc_phototropin_like 100.0 4.6E-34 1E-38 313.4 19.7 254 631-931 1-288 (316)
302 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.9E-34 1.1E-38 308.1 19.6 254 631-931 1-260 (283)
303 cd06632 STKc_MEKK1_plant Catal 100.0 6.2E-34 1.3E-38 302.9 20.0 248 632-931 1-254 (258)
304 cd07855 STKc_ERK5 Catalytic do 100.0 3.9E-34 8.3E-39 316.1 18.8 285 630-932 4-294 (334)
305 cd06630 STKc_MEKK1 Catalytic d 100.0 9.1E-34 2E-38 303.4 21.1 254 632-931 1-263 (268)
306 cd07833 STKc_CDKL Catalytic do 100.0 4.1E-34 9E-39 309.6 18.7 276 631-931 1-284 (288)
307 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.8E-34 8.2E-39 316.4 18.6 288 630-938 4-299 (337)
308 cd06626 STKc_MEKK4 Catalytic d 100.0 8.6E-34 1.9E-38 302.9 20.7 253 632-931 1-260 (264)
309 cd06648 STKc_PAK_II Catalytic 100.0 8.5E-34 1.8E-38 306.0 20.5 249 632-931 20-268 (285)
310 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-33 2.9E-38 301.5 21.8 253 631-932 1-256 (264)
311 PHA02882 putative serine/threo 100.0 5.8E-34 1.3E-38 308.4 18.9 264 630-933 11-293 (294)
312 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-33 2.9E-38 307.2 21.1 275 632-931 1-281 (298)
313 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-33 3.2E-38 303.0 21.2 248 632-932 5-253 (277)
314 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-33 2.4E-38 310.8 20.5 209 632-852 1-220 (316)
315 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-35 2.6E-40 341.4 5.0 255 628-931 1232-1493(1509)
316 cd05580 STKc_PKA Catalytic dom 100.0 7.1E-34 1.5E-38 307.7 18.7 245 631-931 1-253 (290)
317 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-33 2.3E-38 315.0 20.4 285 628-932 13-311 (353)
318 KOG0983 Mitogen-activated prot 100.0 1.5E-34 3.2E-39 278.7 11.3 250 633-931 94-348 (391)
319 cd07837 STKc_CdkB_plant Cataly 100.0 1.3E-33 2.8E-38 306.8 20.3 284 631-931 1-290 (295)
320 cd07852 STKc_MAPK15 Catalytic 100.0 8.6E-34 1.9E-38 313.9 19.0 288 629-936 5-301 (337)
321 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-33 3E-38 303.6 20.0 249 632-932 2-255 (277)
322 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-33 2.2E-38 307.2 19.1 279 631-931 5-289 (293)
323 cd07865 STKc_CDK9 Catalytic do 100.0 2E-33 4.3E-38 307.9 20.5 285 630-931 11-306 (310)
324 KOG0671 LAMMER dual specificit 100.0 2.3E-34 5E-39 291.7 11.9 280 629-931 87-405 (415)
325 cd05633 STKc_GRK3 Catalytic do 100.0 2.3E-33 4.9E-38 301.5 20.3 243 638-932 1-255 (279)
326 cd06607 STKc_TAO Catalytic dom 100.0 2.7E-33 5.9E-38 305.7 21.2 248 630-932 14-267 (307)
327 cd07836 STKc_Pho85 Catalytic d 100.0 2.8E-33 6.1E-38 302.4 20.9 275 632-931 1-280 (284)
328 cd08225 STKc_Nek5 Catalytic do 100.0 1.5E-33 3.2E-38 299.8 18.4 250 632-931 1-253 (257)
329 KOG0986 G protein-coupled rece 100.0 2.3E-34 5E-39 296.1 11.6 248 631-926 185-435 (591)
330 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-33 3.4E-38 304.1 18.6 274 633-931 1-279 (283)
331 cd06657 STKc_PAK4 Catalytic do 100.0 1.9E-33 4E-38 304.0 19.1 245 636-931 25-269 (292)
332 cd06616 PKc_MKK4 Catalytic dom 100.0 9.3E-34 2E-38 306.7 16.6 258 632-932 5-267 (288)
333 PHA03390 pk1 serine/threonine- 100.0 4.8E-33 1E-37 296.9 21.7 251 623-931 6-261 (267)
334 KOG0662 Cyclin-dependent kinas 100.0 1E-33 2.2E-38 255.8 13.8 276 632-931 3-282 (292)
335 cd07840 STKc_CDK9_like Catalyt 100.0 4E-33 8.6E-38 301.8 21.3 276 633-931 1-283 (287)
336 cd07845 STKc_CDK10 Catalytic d 100.0 2.9E-33 6.3E-38 305.9 20.4 280 630-931 6-289 (309)
337 KOG0607 MAP kinase-interacting 100.0 6.6E-34 1.4E-38 279.9 13.4 273 621-931 73-360 (463)
338 cd07834 STKc_MAPK Catalytic do 100.0 2.5E-33 5.3E-38 309.7 19.7 291 632-938 1-297 (330)
339 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-33 6.1E-38 308.4 20.0 287 637-939 4-317 (328)
340 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-33 7.6E-38 301.4 20.4 275 633-931 1-278 (282)
341 cd06614 STKc_PAK Catalytic dom 100.0 3.2E-33 6.9E-38 302.1 20.1 253 629-931 17-269 (286)
342 cd05122 PKc_STE Catalytic doma 100.0 3.8E-33 8.3E-38 295.7 20.3 250 632-931 1-250 (253)
343 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-33 2.6E-38 300.5 16.5 248 632-930 1-253 (258)
344 KOG0200 Fibroblast/platelet-de 100.0 1.7E-33 3.7E-38 329.4 19.1 268 631-937 296-580 (609)
345 cd07838 STKc_CDK4_6_like Catal 100.0 7E-33 1.5E-37 299.9 22.5 278 633-931 1-283 (287)
346 cd06606 STKc_MAPKKK Catalytic 100.0 7.1E-33 1.5E-37 295.0 22.1 254 632-931 1-256 (260)
347 cd05577 STKc_GRK Catalytic dom 100.0 3.9E-33 8.5E-38 299.8 19.9 245 639-931 1-253 (277)
348 cd07879 STKc_p38delta_MAPK13 C 100.0 3.6E-33 7.9E-38 309.1 20.1 285 630-939 14-306 (342)
349 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.3E-33 7.1E-38 307.1 19.2 281 626-932 5-288 (328)
350 cd07864 STKc_CDK12 Catalytic d 100.0 8.1E-33 1.8E-37 301.7 21.3 284 628-931 4-298 (302)
351 cd08530 STKc_CNK2-like Catalyt 100.0 4.1E-33 8.8E-38 296.2 18.4 250 632-931 1-252 (256)
352 cd08215 STKc_Nek Catalytic dom 100.0 8.1E-33 1.7E-37 294.3 20.7 252 632-931 1-254 (258)
353 KOG1035 eIF-2alpha kinase GCN2 100.0 6.9E-34 1.5E-38 325.5 13.0 260 629-931 477-870 (1351)
354 cd08216 PK_STRAD Pseudokinase 100.0 8.3E-33 1.8E-37 303.3 21.0 276 636-932 7-295 (314)
355 PLN00009 cyclin-dependent kina 100.0 6.5E-33 1.4E-37 301.0 19.6 277 631-931 2-283 (294)
356 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-32 2.5E-37 294.0 21.1 253 631-931 2-260 (264)
357 cd05572 STKc_cGK_PKG Catalytic 100.0 8.6E-33 1.9E-37 294.7 20.0 243 639-931 1-251 (262)
358 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-32 2.7E-37 301.7 21.8 246 633-933 27-278 (317)
359 cd07857 STKc_MPK1 Catalytic do 100.0 7.4E-33 1.6E-37 305.6 19.7 284 632-932 1-292 (332)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.7E-33 8E-38 309.1 17.0 284 630-931 4-299 (342)
361 cd05118 STKc_CMGC Catalytic do 100.0 1E-32 2.2E-37 298.0 19.9 272 633-931 1-279 (283)
362 cd05611 STKc_Rim15_like Cataly 100.0 6.2E-33 1.4E-37 295.4 17.9 244 637-933 2-249 (260)
363 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-32 2.3E-37 305.3 20.4 286 626-936 10-304 (343)
364 cd05606 STKc_beta_ARK Catalyti 100.0 1.4E-32 3.1E-37 295.3 20.6 242 638-931 1-254 (278)
365 cd07866 STKc_BUR1 Catalytic do 100.0 8.4E-33 1.8E-37 303.0 19.1 285 630-931 7-307 (311)
366 PHA03210 serine/threonine kina 100.0 4.7E-33 1E-37 321.5 17.7 278 629-931 146-453 (501)
367 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-32 2.6E-37 292.2 19.3 248 632-931 1-250 (254)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-32 2.8E-37 304.9 20.2 285 623-932 9-300 (345)
369 KOG0586 Serine/threonine prote 100.0 4.1E-33 9E-38 300.1 15.3 251 628-932 53-306 (596)
370 KOG0669 Cyclin T-dependent kin 100.0 5.4E-35 1.2E-39 278.3 0.7 285 631-931 17-314 (376)
371 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-32 3.1E-37 296.7 19.6 275 633-931 1-279 (283)
372 cd07851 STKc_p38 Catalytic dom 100.0 4.4E-33 9.6E-38 308.5 15.8 281 628-931 12-297 (343)
373 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-32 2.6E-37 299.0 18.0 253 630-932 14-273 (296)
374 cd05579 STKc_MAST_like Catalyt 100.0 6.9E-33 1.5E-37 296.1 15.7 247 639-934 1-256 (265)
375 cd06634 STKc_TAO2 Catalytic do 100.0 1.9E-32 4.2E-37 298.9 19.2 248 631-933 15-268 (308)
376 PTZ00024 cyclin-dependent prot 100.0 3.5E-32 7.5E-37 301.0 19.8 278 630-931 7-312 (335)
377 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-32 3.1E-37 296.3 16.3 250 631-931 1-276 (280)
378 cd06633 STKc_TAO3 Catalytic do 100.0 6.4E-32 1.4E-36 295.3 21.2 245 633-932 23-273 (313)
379 KOG0690 Serine/threonine prote 100.0 4.5E-33 9.8E-38 274.3 10.6 201 630-850 167-370 (516)
380 cd08222 STKc_Nek11 Catalytic d 100.0 4.5E-32 9.8E-37 288.8 17.9 251 632-931 1-256 (260)
381 cd05583 STKc_MSK_N N-terminal 100.0 4.9E-32 1.1E-36 293.2 18.3 257 632-936 1-267 (288)
382 cd07829 STKc_CDK_like Catalyti 100.0 6.9E-32 1.5E-36 291.3 19.3 271 633-931 1-278 (282)
383 KOG0587 Traf2- and Nck-interac 100.0 3E-32 6.5E-37 302.7 16.2 266 622-931 10-281 (953)
384 KOG1151 Tousled-like protein k 100.0 4.3E-33 9.3E-38 284.7 7.0 260 630-931 462-740 (775)
385 cd05610 STKc_MASTL Catalytic d 100.0 8.7E-32 1.9E-36 320.4 19.0 147 630-794 3-152 (669)
386 cd05613 STKc_MSK1_N N-terminal 100.0 1.9E-31 4.1E-36 288.9 19.7 252 632-931 1-267 (290)
387 KOG0603 Ribosomal protein S6 k 100.0 3E-32 6.6E-37 295.2 12.5 240 630-931 321-562 (612)
388 KOG1006 Mitogen-activated prot 100.0 1.1E-33 2.4E-38 271.8 0.6 254 637-932 70-327 (361)
389 KOG1290 Serine/threonine prote 100.0 1.9E-31 4.2E-36 277.4 17.0 283 631-931 78-549 (590)
390 cd05123 STKc_AGC Catalytic dom 100.0 2.5E-31 5.3E-36 281.4 17.1 237 639-928 1-240 (250)
391 KOG4236 Serine/threonine prote 100.0 2.6E-32 5.6E-37 284.6 8.7 244 636-930 569-817 (888)
392 KOG0612 Rho-associated, coiled 100.0 2.2E-32 4.8E-37 310.6 8.3 206 626-850 70-283 (1317)
393 PLN03225 Serine/threonine-prot 100.0 7.8E-31 1.7E-35 303.9 19.0 277 629-931 130-449 (566)
394 cd05576 STKc_RPK118_like Catal 100.0 5.8E-31 1.2E-35 275.5 14.9 223 642-929 4-226 (237)
395 KOG0984 Mitogen-activated prot 100.0 2.4E-31 5.2E-36 246.5 9.4 211 627-854 42-258 (282)
396 KOG0696 Serine/threonine prote 100.0 4.5E-31 9.8E-36 267.9 9.1 204 628-851 346-553 (683)
397 KOG0668 Casein kinase II, alph 100.0 8.2E-31 1.8E-35 246.4 9.5 279 628-931 35-321 (338)
398 KOG0664 Nemo-like MAPK-related 100.0 1.1E-31 2.4E-36 258.4 2.6 282 634-933 56-344 (449)
399 PLN03224 probable serine/threo 100.0 1.2E-29 2.7E-34 285.4 19.0 279 629-931 143-499 (507)
400 smart00220 S_TKc Serine/Threon 100.0 1.7E-29 3.7E-34 265.9 17.0 239 643-931 1-240 (244)
401 KOG0695 Serine/threonine prote 100.0 1E-29 2.2E-34 251.4 13.2 201 630-850 249-453 (593)
402 KOG0614 cGMP-dependent protein 100.0 5.6E-31 1.2E-35 274.2 3.8 200 631-851 420-622 (732)
403 KOG1027 Serine/threonine prote 100.0 4.7E-30 1E-34 284.0 8.1 245 635-931 513-766 (903)
404 KOG0670 U4/U6-associated splic 100.0 3.9E-29 8.4E-34 261.2 6.8 284 627-931 428-745 (752)
405 KOG0608 Warts/lats-like serine 100.0 1.7E-28 3.8E-33 261.5 11.6 206 632-855 630-878 (1034)
406 KOG0576 Mitogen-activated prot 100.0 2E-29 4.2E-34 271.5 4.1 254 630-931 14-270 (829)
407 KOG1152 Signal transduction se 100.0 8.7E-29 1.9E-33 262.1 8.6 207 621-849 551-770 (772)
408 KOG0665 Jun-N-terminal kinase 99.9 1.9E-28 4.1E-33 242.9 8.2 279 629-931 15-309 (369)
409 KOG1167 Serine/threonine prote 99.9 4E-28 8.6E-33 250.4 10.4 282 627-931 32-380 (418)
410 KOG1345 Serine/threonine kinas 99.9 5.1E-28 1.1E-32 233.5 8.9 256 629-933 22-285 (378)
411 KOG4237 Extracellular matrix p 99.9 1.5E-29 3.2E-34 256.8 -2.9 424 12-525 54-498 (498)
412 cd00180 PKc Catalytic domain o 99.9 2.5E-26 5.3E-31 236.1 19.9 211 639-932 1-214 (215)
413 smart00221 STYKc Protein kinas 99.9 1.1E-25 2.3E-30 234.0 17.5 200 633-850 1-202 (225)
414 KOG4237 Extracellular matrix p 99.9 1.6E-28 3.4E-33 249.4 -4.7 229 4-234 67-311 (498)
415 PLN03210 Resistant to P. syrin 99.9 9.3E-24 2E-28 266.1 25.2 320 22-403 552-878 (1153)
416 smart00750 KIND kinase non-cat 99.9 2.5E-24 5.5E-29 214.1 14.3 169 718-938 1-171 (176)
417 PLN03210 Resistant to P. syrin 99.9 1.7E-23 3.7E-28 263.6 23.6 160 44-209 550-716 (1153)
418 PLN00181 protein SPA1-RELATED; 99.9 1.5E-24 3.3E-29 265.5 10.6 201 684-931 28-264 (793)
419 KOG0195 Integrin-linked kinase 99.9 1E-24 2.3E-29 210.4 6.3 247 635-937 194-447 (448)
420 PRK09188 serine/threonine prot 99.9 2.2E-23 4.8E-28 224.9 15.6 168 627-823 14-195 (365)
421 PRK15387 E3 ubiquitin-protein 99.9 1.4E-23 3E-28 244.2 14.9 258 30-362 203-460 (788)
422 PRK15387 E3 ubiquitin-protein 99.9 2E-23 4.4E-28 242.8 15.7 262 52-411 201-462 (788)
423 KOG1164 Casein kinase (serine/ 99.9 4.7E-22 1E-26 216.8 20.0 265 632-940 19-301 (322)
424 KOG1165 Casein kinase (serine/ 99.9 5.7E-22 1.2E-26 197.4 16.7 266 631-941 28-304 (449)
425 KOG1163 Casein kinase (serine/ 99.9 2.9E-22 6.4E-27 190.6 12.4 263 629-938 13-286 (341)
426 KOG0590 Checkpoint kinase and 99.9 8.1E-23 1.8E-27 235.7 7.0 255 635-932 322-585 (601)
427 PRK15370 E3 ubiquitin-protein 99.9 1E-21 2.2E-26 230.7 10.6 118 77-210 179-296 (754)
428 PRK15370 E3 ubiquitin-protein 99.9 1.3E-21 2.8E-26 229.7 10.9 180 6-210 180-359 (754)
429 PRK10359 lipopolysaccharide co 99.8 7.3E-21 1.6E-25 190.1 8.8 183 623-843 21-217 (232)
430 COG0515 SPS1 Serine/threonine 99.8 2E-19 4.3E-24 199.9 20.8 260 633-932 2-275 (384)
431 KOG1240 Protein kinase contain 99.8 8.4E-21 1.8E-25 216.2 6.7 248 632-935 24-294 (1431)
432 PF14531 Kinase-like: Kinase-l 99.8 2.9E-20 6.3E-25 191.5 9.2 243 632-923 13-288 (288)
433 cd05147 RIO1_euk RIO kinase fa 99.8 9.5E-20 2.1E-24 181.2 10.9 139 636-796 2-167 (190)
434 KOG0617 Ras suppressor protein 99.8 7.4E-22 1.6E-26 178.0 -3.9 164 23-192 28-192 (264)
435 KOG4158 BRPK/PTEN-induced prot 99.8 1.3E-19 2.8E-24 184.7 11.6 202 686-933 274-511 (598)
436 PRK12274 serine/threonine prot 99.8 7.6E-19 1.7E-23 171.2 13.9 190 634-854 5-213 (218)
437 cd05145 RIO1_like RIO kinase f 99.8 9.4E-19 2E-23 175.2 14.0 139 636-797 2-168 (190)
438 KOG0617 Ras suppressor protein 99.8 7.2E-21 1.6E-25 171.7 -2.0 161 5-171 34-195 (264)
439 KOG1023 Natriuretic peptide re 99.8 4.9E-19 1.1E-23 194.0 11.6 219 682-939 1-227 (484)
440 KOG1166 Mitotic checkpoint ser 99.8 1.1E-18 2.5E-23 204.1 13.1 198 627-846 694-901 (974)
441 PRK10345 hypothetical protein; 99.7 1.5E-17 3.3E-22 166.5 13.1 139 634-793 5-156 (210)
442 smart00090 RIO RIO-like kinase 99.7 2.9E-17 6.2E-22 169.2 13.6 142 632-796 29-198 (237)
443 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.2E-18 2.5E-23 186.5 2.7 125 706-843 329-457 (516)
444 cd00116 LRR_RI Leucine-rich re 99.7 8.3E-20 1.8E-24 200.7 -7.2 59 300-358 251-318 (319)
445 KOG0603 Ribosomal protein S6 k 99.7 3.4E-18 7.3E-23 186.6 2.6 187 638-850 1-193 (612)
446 cd00116 LRR_RI Leucine-rich re 99.7 4.4E-19 9.5E-24 195.0 -6.0 178 8-185 2-206 (319)
447 PRK14879 serine/threonine prot 99.7 3.5E-16 7.5E-21 160.5 14.1 134 637-795 2-143 (211)
448 cd05144 RIO2_C RIO kinase fami 99.7 4.7E-16 1E-20 157.2 13.5 141 628-797 12-176 (198)
449 KOG0606 Microtubule-associated 99.6 9.6E-17 2.1E-21 183.6 5.1 212 628-924 80-304 (1205)
450 PRK09605 bifunctional UGMP fam 99.6 2.2E-15 4.8E-20 175.8 15.0 144 623-795 325-476 (535)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 2E-15 4.4E-20 153.1 10.8 130 638-795 1-138 (199)
452 cd05119 RIO RIO kinase family, 99.6 1.2E-14 2.5E-19 145.9 11.6 135 636-796 2-164 (187)
453 KOG0590 Checkpoint kinase and 99.6 3.6E-16 7.9E-21 180.8 0.3 257 630-931 19-285 (601)
454 cd05120 APH_ChoK_like Aminogly 99.6 2.6E-14 5.7E-19 138.2 12.3 135 635-795 2-138 (155)
455 KOG0532 Leucine-rich repeat (L 99.5 6.1E-16 1.3E-20 165.4 -4.7 176 326-534 78-253 (722)
456 PLN03150 hypothetical protein; 99.5 1.6E-14 3.5E-19 170.1 6.6 119 444-565 419-539 (623)
457 PRK01723 3-deoxy-D-manno-octul 99.5 1.5E-13 3.3E-18 142.0 12.6 139 636-795 36-191 (239)
458 KOG0532 Leucine-rich repeat (L 99.5 1.5E-15 3.2E-20 162.5 -3.1 198 32-239 54-252 (722)
459 COG4886 Leucine-rich repeat (L 99.4 1.2E-13 2.7E-18 156.1 6.3 200 8-217 97-297 (394)
460 COG4886 Leucine-rich repeat (L 99.4 1.9E-13 4.1E-18 154.5 7.2 198 32-239 97-295 (394)
461 KOG1266 Protein kinase [Signal 99.4 3.1E-13 6.8E-18 135.5 6.9 162 679-847 118-281 (458)
462 TIGR01982 UbiB 2-polyprenylphe 99.3 4.1E-12 8.8E-17 143.0 12.2 142 636-797 122-308 (437)
463 KOG0601 Cyclin-dependent kinas 99.3 2.5E-12 5.4E-17 141.4 7.1 199 632-849 115-328 (524)
464 PLN03150 hypothetical protein; 99.3 4.3E-12 9.2E-17 149.7 8.1 112 421-532 420-532 (623)
465 PRK04750 ubiB putative ubiquin 99.2 2.4E-11 5.3E-16 137.8 11.3 149 631-798 120-316 (537)
466 cd05146 RIO3_euk RIO kinase fa 99.2 1.3E-10 2.8E-15 114.1 14.2 138 636-797 2-175 (197)
467 KOG1243 Protein kinase [Genera 99.2 6.1E-11 1.3E-15 131.4 12.7 170 649-844 30-199 (690)
468 PF14580 LRR_9: Leucine-rich r 99.2 6.3E-12 1.4E-16 120.8 3.1 56 30-89 21-77 (175)
469 PF14580 LRR_9: Leucine-rich r 99.2 8.4E-12 1.8E-16 119.9 3.6 136 35-178 4-146 (175)
470 KOG1259 Nischarin, modulator o 99.2 3E-12 6.4E-17 126.6 -0.0 210 20-239 206-417 (490)
471 KOG0531 Protein phosphatase 1, 99.2 1.9E-12 4.1E-17 146.2 -1.7 197 50-256 70-267 (414)
472 cd05151 ChoK Choline Kinase (C 99.2 1.1E-10 2.4E-15 115.0 9.9 131 636-795 3-136 (170)
473 KOG0531 Protein phosphatase 1, 99.2 6.8E-12 1.5E-16 141.8 1.2 221 26-257 70-290 (414)
474 COG4248 Uncharacterized protei 99.2 8.8E-10 1.9E-14 114.9 16.0 278 634-943 14-307 (637)
475 KOG1259 Nischarin, modulator o 99.1 4.7E-12 1E-16 125.2 -0.8 133 47-185 279-412 (490)
476 KOG3207 Beta-tubulin folding c 99.1 7.1E-12 1.5E-16 130.8 -0.1 162 22-185 115-284 (505)
477 KOG1909 Ran GTPase-activating 99.1 2.8E-12 6.1E-17 130.3 -6.7 243 4-257 30-311 (382)
478 KOG3207 Beta-tubulin folding c 99.0 3.4E-11 7.5E-16 125.8 0.3 214 98-337 119-340 (505)
479 KOG0601 Cyclin-dependent kinas 99.0 1.7E-10 3.6E-15 127.2 4.9 251 629-937 263-519 (524)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 5.4E-09 1.2E-13 108.1 13.4 145 637-795 4-206 (223)
481 KOG3741 Poly(A) ribonuclease s 99.0 1.2E-08 2.6E-13 109.6 15.7 182 643-847 288-475 (655)
482 KOG4658 Apoptotic ATPase [Sign 98.9 5.3E-10 1.2E-14 134.5 4.8 201 28-235 523-731 (889)
483 COG3642 Mn2+-dependent serine/ 98.9 1E-08 2.2E-13 96.5 11.2 129 637-795 2-140 (204)
484 PF01163 RIO1: RIO1 family; I 98.9 1.3E-08 2.8E-13 99.8 12.2 125 646-796 1-156 (188)
485 KOG0606 Microtubule-associated 98.9 5.3E-10 1.1E-14 129.3 1.8 205 629-851 802-1038(1205)
486 PF13855 LRR_8: Leucine rich r 98.9 1.3E-09 2.8E-14 86.1 3.2 59 77-135 2-60 (61)
487 PF13855 LRR_8: Leucine rich r 98.9 2.5E-09 5.5E-14 84.4 4.6 60 101-160 2-61 (61)
488 KOG1909 Ran GTPase-activating 98.9 1.9E-10 4.2E-15 117.2 -2.4 250 95-359 25-310 (382)
489 KOG3087 Serine/threonine prote 98.8 2.5E-08 5.4E-13 93.1 10.8 141 635-795 11-165 (229)
490 COG0478 RIO-like serine/threon 98.8 2.8E-08 6E-13 99.4 11.0 135 633-795 93-251 (304)
491 KOG4658 Apoptotic ATPase [Sign 98.8 4.6E-09 9.9E-14 126.5 4.4 127 52-181 523-651 (889)
492 PRK15123 lipopolysaccharide co 98.7 1.5E-07 3.3E-12 98.3 14.1 146 637-795 28-194 (268)
493 KOG1859 Leucine-rich repeat pr 98.6 4.2E-10 9E-15 124.3 -9.3 180 21-210 102-292 (1096)
494 KOG4579 Leucine-rich repeat (L 98.6 1.4E-09 3E-14 95.7 -4.7 102 8-113 31-136 (177)
495 KOG2137 Protein kinase [Signal 98.6 1.9E-08 4.2E-13 112.4 2.3 150 751-931 107-264 (700)
496 PRK09902 hypothetical protein; 98.5 8.9E-07 1.9E-11 87.1 12.7 144 638-795 25-179 (216)
497 KOG4579 Leucine-rich repeat (L 98.5 2.9E-09 6.2E-14 93.7 -4.8 78 424-504 58-136 (177)
498 KOG1859 Leucine-rich repeat pr 98.5 3.6E-09 7.7E-14 117.2 -7.2 128 395-530 165-294 (1096)
499 PF06176 WaaY: Lipopolysacchar 98.4 2.8E-06 6.2E-11 83.8 12.3 142 629-794 29-182 (229)
500 COG1718 RIO1 Serine/threonine 98.4 2.5E-06 5.5E-11 84.8 12.0 153 620-797 34-217 (268)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.3e-107 Score=1022.20 Aligned_cols=874 Identities=32% Similarity=0.511 Sum_probs=739.0
Q ss_pred cCcEEEEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccC-CCCCCCcEEeCCCCccccccCcCccCCCCCcEE
Q 043900 3 HQRVKILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEF-DRLQRLQVLALNNNSIGGEIPANISSCSNLIQI 81 (953)
Q Consensus 3 ~~~~~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 81 (953)
..+|+.|||+++++.+.++..+..+++|++|+|++|++++.+|..+ ..+++|++|+|++|.+++.+|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 4689999999999999999999999999999999999998788765 4999999999999999988886 568999999
Q ss_pred eccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceeccccccc
Q 043900 82 RLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLS 161 (953)
Q Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (953)
+|++|.+++.+|..|+++++|++|+|++|.+.+.+|.+|+++++|++|+|++|++.+.+|..|+.+++|++|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCC-C
Q 043900 162 GTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPY-L 240 (953)
Q Consensus 162 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-l 240 (953)
+.+|..+.++++|++|++++|++++.+|..+. .+++|++|++++|++.+..|..+.++++|+.|++++|.+++.+|. +
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHh-CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 99999999999999999999999999998876 799999999999999999999999999999999999999987664 7
Q ss_pred CCCCccceeeecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCcccc
Q 043900 241 EKPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIG 320 (953)
Q Consensus 241 ~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~ 320 (953)
..+++|+.+++++|.+.... ...+..+++|+.|++++|.+.+.+|..+..+ ++|+.|++++|++.+..|..+.
T Consensus 305 ~~l~~L~~L~l~~n~~~~~~------~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~-~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 305 IQLQNLEILHLFSNNFTGKI------PVALTSLPRLQVLQLWSNKFSGEIPKNLGKH-NNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred cCCCCCcEEECCCCccCCcC------ChhHhcCCCCCEEECcCCCCcCcCChHHhCC-CCCcEEECCCCeeEeeCChhHh
Confidence 88899999999999886532 2345678899999999999999999999888 6899999999999999999999
Q ss_pred CCCCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCc-eeeEEEccCCcCCCCCCccCCCCCCCcEE
Q 043900 321 KFVNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNL-KVFNLDLSCNFLQGSIPSSLGQYKTLTII 399 (953)
Q Consensus 321 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~l~~L~L~~N~l~~~~p~~~~~l~~L~~L 399 (953)
.+++|+.|++++|.+.+..|..+..+++|+.|++++|++++.+|..+..+ .+..|++++|.+++.+|..+..+++|+.|
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 457 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEE
Confidence 99999999999999999999999999999999999999999999999888 47899999999999999999999999999
Q ss_pred EcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccc
Q 043900 400 DLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFL 479 (953)
Q Consensus 400 ~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 479 (953)
+|++|++.+.+|..+. . ..++.|++++|++++..|..|.++++|+.|+|++|++.+.+|..+.++++|+.|+|++|.+
T Consensus 458 ~L~~n~~~~~~p~~~~-~-~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 458 SLARNKFFGGLPDSFG-S-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred ECcCceeeeecCcccc-c-ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 9999999988887653 2 4677999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCCCCCcEEECCCCcccccCCccccccccCceEeccCCcCcccCCCCCcccccccccccCCcCCCCCCCCCC
Q 043900 480 QGPIPSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNNNLEGMVPIEGVFKNATITSVLGNLKLCGGIPEFQ 559 (953)
Q Consensus 480 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~~~~~ 559 (953)
++.+|..|..+++|+.|||++|++++.+|..+..+++|+.|++++|+++|.+|..+.+..+...++.||+.+||..+...
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~ 615 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG 615 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999877666
Q ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc--cCCCCC-CCCCC--------CCcCHHHHHH
Q 043900 560 LPTCISKESKHKKLTLALKLALAIISGLTGLSLALSFLILCLVRKRKE--KKNPSS-PINSF--------PNISYQNLYN 628 (953)
Q Consensus 560 ~~~c~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~-~~~~~--------~~~~~~~~~~ 628 (953)
.++|........ +.++++++++++++++++++++++++++++. ++.... ..... ..++++ .
T Consensus 616 ~~~c~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 687 (968)
T PLN00113 616 LPPCKRVRKTPS-----WWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIN---D 687 (968)
T ss_pred CCCCccccccce-----eeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHH---H
Confidence 778854321111 1111111222222222222222222222211 111100 00000 112222 3
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
....|...+.||+|+||.||+|++..+++.||||+++.... ....|++.+++++||||++++++|.. ++..
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~-----~~~~ 758 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS-----EKGA 758 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc-----CCCC
Confidence 34567788899999999999999988888999999864332 12346888999999999999999753 3678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.++++ .++|.++.+|+.|+++||+|||+.+.++|+||||||+||+++.++.+++.
T Consensus 759 ~lv~Ey~~~g~L~~~l~-------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~ 825 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR-------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR 825 (968)
T ss_pred EEEEeCCCCCcHHHHHh-------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE
Confidence 99999999999999994 37899999999999999999997666799999999999999999988876
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.+..... .....+++.|+|||++.+..++.++|||||||++|||+||+.||+..........+|++.....
T Consensus 826 -~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 898 (968)
T PLN00113 826 -LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD 898 (968)
T ss_pred -ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc
Confidence 665543211 1123578999999999999999999999999999999999999976555555666666554433
Q ss_pred h-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHHhc
Q 043900 869 H-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNILL 941 (953)
Q Consensus 869 ~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 941 (953)
. ...++|+.+.... ....+...++.+++.+||+.||++||||+||+++|+++.+...
T Consensus 899 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 899 CHLDMWIDPSIRGDV----------------SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred cchhheeCccccCCC----------------CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 2 3334443332211 1112445678899999999999999999999999999876443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.6e-59 Score=589.43 Aligned_cols=570 Identities=33% Similarity=0.485 Sum_probs=497.1
Q ss_pred CccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCcc-CCCCCcEEeccCccccccCCcccCCcccccee
Q 043900 27 LSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANIS-SCSNLIQIRLFYNELVGKIPSELGSLSKIEHL 105 (953)
Q Consensus 27 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (953)
..+++.|+|++|++++.+|.+|..+++|++|+|++|++++.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 35799999999999999999999999999999999999988998765 999999999999999988875 568999999
Q ss_pred eccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccc
Q 043900 106 SVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQ 185 (953)
Q Consensus 106 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 185 (953)
+|++|.+++.+|..++++++|++|+|++|.+.+.+|..|+.+++|++|+|++|++++.+|..+.++.+|+.|+|++|+++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCC-CCCCCCccceeeecccccCCCCCCcc
Q 043900 186 GVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVP-YLEKPQRLSVFSITENSLGSRGHSNL 264 (953)
Q Consensus 186 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~~~~L~~l~l~~n~l~~~~~~~~ 264 (953)
+.+|..+. .+++|++|++++|++++.+|..++++++|+.|++++|++++..| .+..+++|+++++++|.+....
T Consensus 226 ~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~---- 300 (968)
T PLN00113 226 GEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI---- 300 (968)
T ss_pred CcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC----
Confidence 99998886 89999999999999999999999999999999999999998655 5788899999999999886432
Q ss_pred cccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCcc
Q 043900 265 NFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIG 344 (953)
Q Consensus 265 ~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 344 (953)
...+.++++|+.|++++|.+.+.+|..+..+ ++|+.|++++|.+.+..|..++.+++|+.|++++|.+++..|.+++
T Consensus 301 --p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 301 --PELVIQLQNLEILHLFSNNFTGKIPVALTSL-PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred --ChhHcCCCCCcEEECCCCccCCcCChhHhcC-CCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 2235678899999999999999999999888 5899999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEeccccccCCCCCCCCCc-eeeEEEccCCcCCCCCCccCCCCCCCcEEEcCCCccCCCCCccccCcccccee
Q 043900 345 ELQNLRELRLQRNKFLGNIPPSIGNL-KVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSDNNLTGTIPPQFLGLSWLLIG 423 (953)
Q Consensus 345 ~l~~L~~L~L~~N~l~~~~p~~~~~l-~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~ 423 (953)
.+++|+.|++++|++.+.+|..++.+ .++.|++++|.+++.+|..|..+++|+.|++++|++++.+|..+..+. .++.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~ 456 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMP-SLQM 456 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCC-CCcE
Confidence 99999999999999999999999887 579999999999999999999999999999999999998888776655 4669
Q ss_pred eeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCcc
Q 043900 424 LDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNL 503 (953)
Q Consensus 424 L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 503 (953)
|++++|++.+.+|..+ ..++|+.|++++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++|++|+|++|.+
T Consensus 457 L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 457 LSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred EECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 9999999999888876 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccccCceEeccCCcCcccCCCC-CcccccccccccCCcCCCCCCCCCCC-------------Cccccccch
Q 043900 504 SGKIPEFLVGFQLLENLNLSNNNLEGMVPIE-GVFKNATITSVLGNLKLCGGIPEFQL-------------PTCISKESK 569 (953)
Q Consensus 504 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lcg~~~~~~~-------------~~c~~~~~~ 569 (953)
++.+|..+..+++|+.|+|++|+++|.+|.. ..+..+....+.+|. +.|..|.... .-|......
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~-l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~ 614 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH-LHGSLPSTGAFLAINASAVAGNIDLCGGDTTS 614 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc-ceeeCCCcchhcccChhhhcCCccccCCcccc
Confidence 9999999999999999999999999999864 334455566666665 4443442210 123221110
Q ss_pred --hhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccC
Q 043900 570 --HKKL-TLALKLALAIISGLTGLSLALSFLILCLVRKRKEKK 609 (953)
Q Consensus 570 --~~~~-~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~r~~~~ 609 (953)
.... .......+.+++++++++++++++++.++++|+++.
T Consensus 615 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (968)
T PLN00113 615 GLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNN 657 (968)
T ss_pred CCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 0000 011222334566666666666666777777776544
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-48 Score=421.56 Aligned_cols=290 Identities=39% Similarity=0.672 Sum_probs=244.4
Q ss_pred CCCCcCHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEee
Q 043900 617 SFPNISYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTA 696 (953)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 696 (953)
....|++.++..+|++|...+.||+|+||.||+|...++ +.||||++........++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 567799999999999999999999999999999999987 5899998875443214569999999999999999999999
Q ss_pred ecccccCCCC-ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCC
Q 043900 697 CSGVDYQGND-FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPS 775 (953)
Q Consensus 697 ~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 775 (953)
|.+. + +.++|||||++|+|.++++..... .++|.+|++||.++|+||+|||+.+.+.|+||||||+
T Consensus 140 C~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~--------~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKss 206 (361)
T KOG1187|consen 140 CLEG-----GEHRLLVYEYMPNGSLEDHLHGKKGE--------PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSS 206 (361)
T ss_pred EecC-----CceEEEEEEccCCCCHHHHhCCCCCC--------CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHH
Confidence 9754 3 589999999999999999743321 6899999999999999999999998889999999999
Q ss_pred CeEecCCCcEEEeccccceecCCCCCccccccc-ccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcc-c
Q 043900 776 NVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDA-KGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMF-E 853 (953)
Q Consensus 776 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~-~ 853 (953)
|||+|+++++||+|||+|+..+.. ....... .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+... .
T Consensus 207 NILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~ 284 (361)
T KOG1187|consen 207 NILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR 284 (361)
T ss_pred HeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc
Confidence 999999999999999999765431 1111112 79999999999999999999999999999999999999988644 3
Q ss_pred CCccHHHHHHhhCCc-hhhhhccccccC-CchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 854 GDMNLHNFARMALPD-HVVDIVDSTLLS-DDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
....+..|+...+.+ .+.+++|+.+.. .+.. .+...++..++.+|++.+|.+||+|.||++
T Consensus 285 ~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~-----------------~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 285 GELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD-----------------EKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred ccccHHHHHHHHHHCcchhheeCCCccCCCCCh-----------------HHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 345588888777666 588999988762 2211 034566999999999999999999999999
Q ss_pred HHHHHHHH
Q 043900 932 QLQSIKNI 939 (953)
Q Consensus 932 ~L~~i~~~ 939 (953)
+|+.+...
T Consensus 348 ~L~~~~~~ 355 (361)
T KOG1187|consen 348 ELEGILSL 355 (361)
T ss_pred HHHhhccc
Confidence 99665543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=381.84 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=207.8
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeec-cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC-ceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL-LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND-FKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~l 710 (953)
.+..+.||+|..|+||++.++.+++.+|+|++.. ..+...+++.+|++++++.+||+||.++|.|.. +. ...|
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~isI 155 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEISI 155 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEEe
Confidence 4557889999999999999999999999999963 345567889999999999999999999999643 34 6999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++|+|+++++. .+.+++...-+|+.+|++||.|||+ + +||||||||+|||++..|+|||||
T Consensus 156 ~mEYMDgGSLd~~~k~----------~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKR----------VGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred ehhhcCCCCHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEecc
Confidence 9999999999999963 2468999999999999999999996 5 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.++.+... .....+||..|||||.+.+..|+.++||||||++++|+.+|+.||........+..........+.
T Consensus 223 FGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 223 FGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP 298 (364)
T ss_pred ccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC
Confidence 9999877543 445567999999999999999999999999999999999999999864222222222221111111
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.. +.+.. .+++++.+++..|+++||.+|||++|+++.
T Consensus 299 ------------pP-------------~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 299 ------------PP-------------RLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ------------CC-------------CCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00000 467889999999999999999999999873
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=398.08 Aligned_cols=261 Identities=32% Similarity=0.463 Sum_probs=211.8
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
...+.||+|+||+||+|.+++.. .||||++..... ...+.|.+|+.+|.+++|||||+++|+|... ....++|
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~~~~iV 118 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PGSLCIV 118 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCceEEE
Confidence 44566999999999999998864 599999974332 2256999999999999999999999998643 1268999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeecCCCCCeEecCCC-cEEEec
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPP-ITHCDLKPSNVLLDEEM-MAHVSD 789 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kL~D 789 (953)
||||++|+|.++++.. ....+++..+++||.|||+||.|||++ + ||||||||+|||++.++ ++||+|
T Consensus 119 tEy~~~GsL~~~l~~~--------~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK--------RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred EEeCCCCcHHHHHhhc--------ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECC
Confidence 9999999999999753 134799999999999999999999999 7 99999999999999997 999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC--CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL--GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
||+++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+...... ....+...
T Consensus 188 FGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~-~~~v~~~~-- 262 (362)
T KOG0192|consen 188 FGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV-ASAVVVGG-- 262 (362)
T ss_pred Cccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcC--
Confidence 99998764322 2333467999999999999 56999999999999999999999999986433111 11100000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHHhccc
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNILLGH 943 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 943 (953)
.|...+..+++.+..++.+||..||+.||++.|++..|+.+.......
T Consensus 263 ----------------------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 263 ----------------------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred ----------------------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 011111136778999999999999999999999999999998876654
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=393.30 Aligned_cols=257 Identities=30% Similarity=0.449 Sum_probs=216.1
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+...+.||+|-||+||.|.+.... .||+|.++... ...+.|.+|+++|++++|++||+++++|... +..+|||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyIVt 280 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYIVT 280 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCC-cccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEEEE
Confidence 456788999999999999998874 79999998643 2447888999999999999999999998643 4789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
|||+.|+|.+|++... ...+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+
T Consensus 281 E~m~~GsLl~yLr~~~--------~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGL 349 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTRE--------GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGL 349 (468)
T ss_pred EecccCcHHHHhhhcC--------CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccc
Confidence 9999999999997522 34688999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
|+.... +.........-+..|.|||.+..+.++.|||||||||+|||++| |+.||..+...+ +.
T Consensus 350 Ar~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--------------v~ 414 (468)
T KOG0197|consen 350 ARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--------------VL 414 (468)
T ss_pred ccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------HH
Confidence 995433 23333344446789999999999999999999999999999999 999987643321 11
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHHh
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNIL 940 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 940 (953)
+. ..++.|.+.+..||++++++|..||..+|++|||++.+...++++....
T Consensus 415 ~~------------------le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 415 EL------------------LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred HH------------------HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 11 1233455666689999999999999999999999999999999887654
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-46 Score=357.55 Aligned_cols=263 Identities=23% Similarity=0.330 Sum_probs=211.8
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.+|.+.++||+|+||+||++....+++.||.|.++ ..+....+....|+.++++++|||||+++++-. .+++...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchhh
Confidence 45888999999999999999999999999999986 345566788999999999999999999988421 2333448
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCC-CCeEeecCCCCCeEecCCCcEEE
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQ-PPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
+||||||..|||.+.++..+.+ .+.+++..+|+++.|++.||.++|.... .-|+||||||.||+++.+|.|||
T Consensus 96 nivmE~c~~GDLsqmIk~~K~q------kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQ------KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhc------cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 9999999999999999765544 5679999999999999999999999422 23999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++.+.. ........+|||.||+||.+.+..|+++|||||+||++|||+.-++||.+. ++.......-.
T Consensus 170 GDfGL~r~l~s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~q 242 (375)
T KOG0591|consen 170 GDFGLGRFLSS--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQ 242 (375)
T ss_pred ccchhHhHhcc--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHc
Confidence 99999998853 344555678999999999999999999999999999999999999999752 22222221111
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.+. .+-+ ..-.+..+.+++..|+..||+.||+...+++.+..
T Consensus 243 gd~--------~~~p------------------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 GDY--------PPLP------------------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCC--------CCCc------------------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 100 0000 01456679999999999999999997666555544
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-45 Score=370.23 Aligned_cols=253 Identities=20% Similarity=0.248 Sum_probs=203.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-------hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-------HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
.+.|.+.+.+|+|+||.|-+|..+.+++.||||+++... ........+|+++|++++||+||++++++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f----- 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF----- 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee-----
Confidence 356888999999999999999999999999999996321 11223467999999999999999999995
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
+.++..||||||++||+|.+++-. .+.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~----------nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVA----------NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSND 312 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHh----------ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccC
Confidence 455788999999999999999953 33566777789999999999999999 99999999999999765
Q ss_pred ---CcEEEeccccceecCCCCCcccccccccccccccccccCCCC--CC-cccchHHHHHHHHHHHhCCCCCCCcccCCc
Q 043900 783 ---MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE--VS-INGDVYSYGILLLELVTRKKPVDSMFEGDM 856 (953)
Q Consensus 783 ---~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~-~~sDv~slG~vl~elltg~~pf~~~~~~~~ 856 (953)
..+||+|||+|+..+ ....+...+||+.|.|||++.+.. ++ .+.||||+|||+|-+++|.+||.+......
T Consensus 313 ~e~~llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s 389 (475)
T KOG0615|consen 313 AEDCLLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS 389 (475)
T ss_pred CcceEEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc
Confidence 689999999999875 344556678999999999987653 33 478999999999999999999986433221
Q ss_pred cHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 857 NLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...+.....+.. ....+.+..++..+++.+|+..||++|||++|+++
T Consensus 390 l~eQI~~G~y~f----------------------------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 390 LKEQILKGRYAF----------------------------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHHHhcCcccc----------------------------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 222221111110 11223366778999999999999999999999986
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=368.17 Aligned_cols=201 Identities=31% Similarity=0.517 Sum_probs=180.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
...+|...+.||+|+||+||+|+++.++..||||.+... ..+..+-+..|+++++.++|||||++++++. .++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-----~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-----DDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-----cCC
Confidence 456789999999999999999999999999999999654 5566778899999999999999999999954 447
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC----
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE---- 782 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---- 782 (953)
..|+|||||.||||.+|++.. +.+++..++.++.|+|.||++||++ +||||||||+|||++..
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~----------~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~ 149 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRR----------GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARND 149 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCC
Confidence 999999999999999999743 3689999999999999999999999 99999999999999764
Q ss_pred --CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 783 --MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 783 --~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
-.+||+|||+|+.+.+. ......+|++.|||||++...+|+.|+|+||+|+++||+++|+.||+.
T Consensus 150 ~~~~LKIADFGfAR~L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 150 TSPVLKIADFGFARFLQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred CCceEEecccchhhhCCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 46899999999988633 333456799999999999999999999999999999999999999985
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-44 Score=403.59 Aligned_cols=272 Identities=26% Similarity=0.418 Sum_probs=225.9
Q ss_pred CCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+.+..+.||+|+||.||+|+.. .....||||.++..... ...+|++|++++..++|||||+++|+|...
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~----- 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG----- 561 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC-----
Confidence 4456788999999999999974 33457999999865555 788999999999999999999999998644
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCC----ccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEA----PRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE 781 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 781 (953)
+..++|+|||..|||.+|+..+......... +.+++..+.+.||.|||.||+||-++ .+|||||..+|+||.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 7899999999999999999866554333322 44599999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHH
Q 043900 782 EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHN 860 (953)
Q Consensus 782 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~ 860 (953)
+..|||+|||+++.+-..+.........-+.+|||||.+..+++|.+|||||||||+||+++ |+.||.+....+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E----- 713 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE----- 713 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-----
Confidence 99999999999998765555544444556889999999999999999999999999999999 999998754332
Q ss_pred HHHhhCCchhhhhc-cccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 861 FARMALPDHVVDIV-DSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 861 ~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
+.+.+ +..+ .+.++.||.++++||..||+..|++||+++||-.+|++..+.
T Consensus 714 ---------VIe~i~~g~l-------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 714 ---------VIECIRAGQL-------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred ---------HHHHHHcCCc-------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 11111 1111 234457899999999999999999999999999999998776
Q ss_pred hcccc
Q 043900 940 LLGHR 944 (953)
Q Consensus 940 ~~~~~ 944 (953)
.+.+.
T Consensus 766 s~~~~ 770 (774)
T KOG1026|consen 766 SPKYS 770 (774)
T ss_pred Ccccc
Confidence 65543
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-44 Score=381.72 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=210.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.+|...+.||+|||+.||.+++.++++.||+|++.. ......+.+.+|+++.++++|||||+++++ |++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 579999999999999999999988888999999963 345567889999999999999999999999 566799
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
+|||.|+|+.++|.++++ ..+.+++.+++.+++||+.||.|||+. +|+|||||..|++++++.+|||
T Consensus 93 VYivLELC~~~sL~el~K----------rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKI 159 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK----------RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKI 159 (592)
T ss_pred eEEEEEecCCccHHHHHH----------hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEe
Confidence 999999999999999996 234799999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+|..+..+ .......+|||.|.|||++.....+..+||||+|||+|.|+.|++||+...
T Consensus 160 gDFGLAt~le~~--~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------------- 222 (592)
T KOG0575|consen 160 GDFGLATQLEYD--GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------------- 222 (592)
T ss_pred cccceeeeecCc--ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---------------
Confidence 999999988533 234456789999999999999999999999999999999999999997521
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+.+.++..-..+ ...+...+.+..+++..+|+.||.+|||+++|+.
T Consensus 223 --vkety~~Ik~~~----------------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 223 --VKETYNKIKLNE----------------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --HHHHHHHHHhcC----------------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111111100000 1111134556789999999999999999999986
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.2e-44 Score=348.63 Aligned_cols=272 Identities=23% Similarity=0.306 Sum_probs=208.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
+.|+...++|+|+||.||+++++++++.||||++.... +...+..++|++++++++|||+|.++++| ......
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 45788899999999999999999999999999996433 33456788999999999999999999995 455889
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++|+|||+..-|.+ +.. .+..++...+.++++|+++|+.|+|++ +++||||||+|||++.+|.+|||
T Consensus 77 hLVFE~~dhTvL~e-Le~---------~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLC 143 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHE-LER---------YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLC 143 (396)
T ss_pred EEEeeecchHHHHH-HHh---------ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEec
Confidence 99999997744443 322 234688899999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh--
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA-- 865 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~-- 865 (953)
|||+|+.+.. .....+..+.|.+|+|||.+.| .+|+...||||+||++.||++|.+.|++..+-|. ....+..
T Consensus 144 DFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ--Ly~I~ktLG 219 (396)
T KOG0593|consen 144 DFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ--LYLIRKTLG 219 (396)
T ss_pred cchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH--HHHHHHHHc
Confidence 9999998753 3334556779999999999887 6899999999999999999999999987443332 2222222
Q ss_pred -CCchhhhhccccccCCchhhhhcccch----hhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 -LPDHVVDIVDSTLLSDDEDLAVHGNQR----QRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 -~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+..+...++...- .+++..- .+..-..........+.+++..|++.||++|++.+|++.
T Consensus 220 ~L~prhq~iF~~N~-------~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 220 NLIPRHQSIFSSNP-------FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCHHHHHHhccCC-------ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 2222233322111 0111110 011111122244457899999999999999999999975
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=5.7e-47 Score=382.72 Aligned_cols=458 Identities=28% Similarity=0.422 Sum_probs=325.3
Q ss_pred CCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCC
Q 043900 44 IPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNL 123 (953)
Q Consensus 44 ~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L 123 (953)
-.+.++.-..|+.|+|++|.++ .+...+.++..|..|++.+|+++ ..|.+++.+..++.|+.++|+++ .+|..++.+
T Consensus 37 e~e~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~ 113 (565)
T KOG0472|consen 37 EGENWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSL 113 (565)
T ss_pred chhhhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhh
Confidence 3445566667778888888877 66666777788888888888887 77778888888888888888887 777788888
Q ss_pred CcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccccccccccccccccccEEE
Q 043900 124 SSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFS 203 (953)
Q Consensus 124 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 203 (953)
.+|+.|+.++|++. ..|+.++.+-.|+.|+..+|+++ ..|+.++++.++..|++.+|.++ ..|.+.. .|+.|+.|+
T Consensus 114 ~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld 189 (565)
T KOG0472|consen 114 ISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLD 189 (565)
T ss_pred hhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHH-HHHHHHhcc
Confidence 88888888888887 67777888888888888888887 77888888888888888888887 4444444 378888888
Q ss_pred eeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCcccccccccccccccEEeccC
Q 043900 204 VFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINA 283 (953)
Q Consensus 204 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~ 283 (953)
...|-++ .+|..++.|.+|+.|++.+|++...| .+..+..|.++++..|.++.
T Consensus 190 ~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~------------------------- 242 (565)
T KOG0472|consen 190 CNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEM------------------------- 242 (565)
T ss_pred cchhhhh-cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHh-------------------------
Confidence 8888887 67888888888888888888887554 66666666666666666553
Q ss_pred CcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccC--
Q 043900 284 NNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLG-- 361 (953)
Q Consensus 284 n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-- 361 (953)
+|.....-.+++..|||+.|+++ ..|+.++.+.+|.+||+|+|.|+ ..|..++++ .|+.|-+.+|.+..
T Consensus 243 ------lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiR 313 (565)
T KOG0472|consen 243 ------LPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIR 313 (565)
T ss_pred ------hHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHH
Confidence 33333322245666666666665 45556666666666666666665 455566666 56666666665421
Q ss_pred -----------------------------------C-CCCCCCCc----eeeEEEccCCcCCCCCCccCCCCCC---CcE
Q 043900 362 -----------------------------------N-IPPSIGNL----KVFNLDLSCNFLQGSIPSSLGQYKT---LTI 398 (953)
Q Consensus 362 -----------------------------------~-~p~~~~~l----~l~~L~L~~N~l~~~~p~~~~~l~~---L~~ 398 (953)
. .+..|... ..+.|++++=+++ .+|+....-.+ .+.
T Consensus 314 r~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~ 392 (565)
T KOG0472|consen 314 REIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTS 392 (565)
T ss_pred HHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEE
Confidence 0 11111111 2356777777777 45555444443 677
Q ss_pred EEcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCcc
Q 043900 399 IDLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNF 478 (953)
Q Consensus 399 L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 478 (953)
.+++.|++. ++|..+..+..+++.+.+++|.++ -+|..++.+++|..|+|++|.+. .+|..++.+..|+.||++.|+
T Consensus 393 VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~Nr 469 (565)
T KOG0472|consen 393 VNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNR 469 (565)
T ss_pred EecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccc
Confidence 888888887 788877777777777777777776 57777788888888888888887 778888888888888888888
Q ss_pred ccCCCCccccCCCCCcEEECCCCcccccCCccccccccCceEeccCCcCcccCCCCCcccccccccccCCc
Q 043900 479 LQGPIPSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNNNLEGMVPIEGVFKNATITSVLGNL 549 (953)
Q Consensus 479 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 549 (953)
|. .+|..+..+..|+.+-.++|++....|+.+.+|.+|.+|||.+|.+...+|..+.+.+.+.....|||
T Consensus 470 Fr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNp 539 (565)
T KOG0472|consen 470 FR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNP 539 (565)
T ss_pred cc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCc
Confidence 87 67777777777777777777777555555777777777777777777777777777777777777775
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.6e-47 Score=385.22 Aligned_cols=468 Identities=25% Similarity=0.369 Sum_probs=327.6
Q ss_pred cCcEEEEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEe
Q 043900 3 HQRVKILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIR 82 (953)
Q Consensus 3 ~~~~~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 82 (953)
.+.+++|++++++++ ++|++++.+..++.|+.++|+++. +|.++..+..|+.|+.++|.+. .+|+.++.+..|+.|+
T Consensus 67 L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~-lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 67 LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSE-LPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLD 143 (565)
T ss_pred ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhh-ccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhh
Confidence 456788888888887 888889999899999999999886 8888888889999999999988 8888888899999999
Q ss_pred ccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccC
Q 043900 83 LFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSG 162 (953)
Q Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (953)
..+|+++ ..|+.++++.+|..|++.+|+++. .|...-+++.|+.||...|-++ .+|..++++.+|..|+|.+|+|.
T Consensus 144 ~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~- 219 (565)
T KOG0472|consen 144 ATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR- 219 (565)
T ss_pred ccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-
Confidence 9999988 788888888999999999999884 4444444889999999999887 77778999999999999999998
Q ss_pred CCCCcccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCC
Q 043900 163 TIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEK 242 (953)
Q Consensus 163 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~ 242 (953)
.+| .|.+++.|++|+++.|+|+ .+|.+...+++++..|||.+|+++ ..|+.++-+++|+.||+++|.+++.++.+++
T Consensus 220 ~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgn 296 (565)
T KOG0472|consen 220 FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGN 296 (565)
T ss_pred cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCccccc
Confidence 778 7888999999999999998 788888878999999999999998 7888999999999999999999998888888
Q ss_pred CCccceeeecccccCCCCCCcccccccccccccccEEe--ccCCcccccCChhhhhccccCcEEEcccCcccccCCcccc
Q 043900 243 PQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLL--INANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIG 320 (953)
Q Consensus 243 ~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~--l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~ 320 (953)
+ +|+.+.+-+|.+......-+ +-..-.-|++|. +...+++..-- .+-..-++ ..+ ......
T Consensus 297 l-hL~~L~leGNPlrTiRr~ii----~~gT~~vLKyLrs~~~~dglS~se~-------~~e~~~t~----~~~-~~~~~~ 359 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLRTIRREII----SKGTQEVLKYLRSKIKDDGLSQSEG-------GTETAMTL----PSE-SFPDIY 359 (565)
T ss_pred c-eeeehhhcCCchHHHHHHHH----cccHHHHHHHHHHhhccCCCCCCcc-------cccccCCC----CCC-cccchh
Confidence 8 88888888887654321110 000000111110 00000000000 00000000 000 001122
Q ss_pred CCCCCCEEEeecCcccccCCcCccCCCC---CCeEEeccccccCCCCCCCCCce--eeEEEccCCcCCCCCCccCCCCCC
Q 043900 321 KFVNLQRLEMWNNRLSGTIPPAIGELQN---LRELRLQRNKFLGNIPPSIGNLK--VFNLDLSCNFLQGSIPSSLGQYKT 395 (953)
Q Consensus 321 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~--l~~L~L~~N~l~~~~p~~~~~l~~ 395 (953)
.+.+.+.|+++.=+++ .+|+....-.. .+..+++.|++. .+|..+..++ ...+.+++|.++ .+|..++.+++
T Consensus 360 ~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~k 436 (565)
T KOG0472|consen 360 AIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQK 436 (565)
T ss_pred hhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhc
Confidence 2334455555555554 33333222222 444455555544 3333333332 122333333333 33444444444
Q ss_pred CcEEEcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEcc
Q 043900 396 LTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQ 475 (953)
Q Consensus 396 L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 475 (953)
|. .|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|..+-.+..|+.+-.+
T Consensus 437 Lt-------------------------~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas 489 (565)
T KOG0472|consen 437 LT-------------------------FLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLAS 489 (565)
T ss_pred ce-------------------------eeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhc
Confidence 44 4555555554 57777778888888888888887 788877777777877777
Q ss_pred CccccCCCCccccCCCCCcEEECCCCcccccCCccccccccCceEeccCCcCc
Q 043900 476 GNFLQGPIPSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNNNLE 528 (953)
Q Consensus 476 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 528 (953)
+|++....|..+.+|.+|.+|||.+|.+. .+|..+++|++|++|++++|+|.
T Consensus 490 ~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 490 NNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 88888666666888888888888888887 77888888888888888888887
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.3e-42 Score=332.39 Aligned_cols=277 Identities=23% Similarity=0.299 Sum_probs=211.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|...+++|+|.||.||+|++..+++.||||+++... ++......+|++.++.++|+||+.++++ +...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 46888999999999999999999999999999997443 3345678899999999999999999999 4556889
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
.+|+|||+. +|...++. ....++..++..++.++++|++|||++ .|+||||||.|+|++.+|.+||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd---------~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiA 143 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKD---------KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIA 143 (318)
T ss_pred EEEEEeccc-cHHHHhcc---------cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEee
Confidence 999999954 99999963 345799999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|||+|+.+..... ...+.+-|.+|+|||.+.|. .|+...||||.|||+.||+-|.+-|.+..+-++ +....+..-.
T Consensus 144 DFGLAr~f~~p~~--~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ-L~~If~~LGT 220 (318)
T KOG0659|consen 144 DFGLARFFGSPNR--IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ-LSKIFRALGT 220 (318)
T ss_pred cccchhccCCCCc--ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH-HHHHHHHcCC
Confidence 9999998864433 33344789999999998886 699999999999999999999887765332221 1222222111
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.....+-+-.-.+++.++.. .+.+... ..-..++....+++..|+..||.+|+|++|++++
T Consensus 221 P~~~~WP~~~~lpdY~~~~~---~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 221 PTPDQWPEMTSLPDYVKIQQ---FPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCcccCccccccccHHHHhc---CCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11222222222233333221 0111111 0112344567999999999999999999999874
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-43 Score=372.50 Aligned_cols=267 Identities=27% Similarity=0.413 Sum_probs=211.7
Q ss_pred HHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 625 NLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 625 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
+.+...+...+.+.||+|.||+||+|.|.+ .||||+++... ++..+.|.+|+.++++-+|.||+-+.|||...
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-- 460 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-- 460 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--
Confidence 333445556788999999999999999987 49999997543 44678999999999999999999999997543
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
. ..||+.+|+|-+|+.+++... ..+...+.+.||+|||+||.|||.+ +|||||||..||++.++
T Consensus 461 ---~-~AIiTqwCeGsSLY~hlHv~e---------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~ 524 (678)
T KOG0193|consen 461 ---P-LAIITQWCEGSSLYTHLHVQE---------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHED 524 (678)
T ss_pred ---c-eeeeehhccCchhhhhccchh---------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccC
Confidence 3 499999999999999998433 3589999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS---EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
++|||+|||++..-..-..........|...|||||++..+ +|++.+||||||+|+|||+||..||... ..+..+-
T Consensus 525 ~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqIif 603 (678)
T KOG0193|consen 525 LKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQIIF 603 (678)
T ss_pred CcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-ChhheEE
Confidence 99999999999764332222233344588999999998654 7999999999999999999999999732 1111100
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
..-+.....+ .......|+.++.+|+..||..++++||.+.+|+..|+.+...
T Consensus 604 mVGrG~l~pd---------------------------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 604 MVGRGYLMPD---------------------------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred EecccccCcc---------------------------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 0000000000 0112236778999999999999999999999999999988765
Q ss_pred h
Q 043900 940 L 940 (953)
Q Consensus 940 ~ 940 (953)
.
T Consensus 657 ~ 657 (678)
T KOG0193|consen 657 L 657 (678)
T ss_pred c
Confidence 4
No 17
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=383.15 Aligned_cols=271 Identities=24% Similarity=0.420 Sum_probs=224.1
Q ss_pred CCcCHHHHHHhhcC---------CcccCcccccceeeEEEEEEcCCC---eEEEEEEeecc-chhhHHHHHHHHHHHhhc
Q 043900 619 PNISYQNLYNATDG---------FASANEIGVGSFGSVYKGILDQGK---TTVAVKVFNLL-HHGAFKSFIAECNTLKNI 685 (953)
Q Consensus 619 ~~~~~~~~~~~~~~---------~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l 685 (953)
..++|+|--.+... ..+.++||.|.||+||+|+.+..+ ..||||.++.. .++...+|..|+.+|.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 34566665444433 357789999999999999996543 46999999854 455678999999999999
Q ss_pred CCCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCC
Q 043900 686 RHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQP 765 (953)
Q Consensus 686 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 765 (953)
+||||+++.|+. .....++||+|||++|+|+.|++.+.+ .+++.+...+.++||.||+||.++
T Consensus 688 dHPNIIrLEGVV-----Tks~PvMIiTEyMENGsLDsFLR~~DG---------qftviQLVgMLrGIAsGMkYLsdm--- 750 (996)
T KOG0196|consen 688 DHPNIIRLEGVV-----TKSKPVMIITEYMENGSLDSFLRQNDG---------QFTVIQLVGMLRGIASGMKYLSDM--- 750 (996)
T ss_pred CCCcEEEEEEEE-----ecCceeEEEhhhhhCCcHHHHHhhcCC---------ceEeehHHHHHHHHHHHhHHHhhc---
Confidence 999999999994 455889999999999999999975543 589999999999999999999999
Q ss_pred CeEeecCCCCCeEecCCCcEEEeccccceecCCCC-CcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-
Q 043900 766 PITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSP-AQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT- 843 (953)
Q Consensus 766 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt- 843 (953)
++|||||.++||||+.+..+|++|||+++.+.++. .........-+.+|.|||.+..++++.+|||||||+||||.++
T Consensus 751 ~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSy 830 (996)
T KOG0196|consen 751 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 830 (996)
T ss_pred CchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEeccc
Confidence 99999999999999999999999999999886544 2223333445689999999999999999999999999999998
Q ss_pred CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCC
Q 043900 844 RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDR 923 (953)
Q Consensus 844 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 923 (953)
|..||.++...+.. ..+ ....|.+.+++|+.++.+||..||++|-.+|
T Consensus 831 GERPYWdmSNQdVI--------------kaI------------------e~gyRLPpPmDCP~aL~qLMldCWqkdR~~R 878 (996)
T KOG0196|consen 831 GERPYWDMSNQDVI--------------KAI------------------EQGYRLPPPMDCPAALYQLMLDCWQKDRNRR 878 (996)
T ss_pred CCCcccccchHHHH--------------HHH------------------HhccCCCCCCCCcHHHHHHHHHHHHHHhhcC
Confidence 99999876543211 111 1123445566899999999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 043900 924 MNMTNVVRQLQSIKN 938 (953)
Q Consensus 924 Pt~~evl~~L~~i~~ 938 (953)
|++.||+..|+++..
T Consensus 879 P~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 879 PKFAQIVSTLDKLIR 893 (996)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999998754
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=364.27 Aligned_cols=276 Identities=22% Similarity=0.255 Sum_probs=209.1
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 706 (953)
..++|.+.++||.|.||+||+|+...++..||||.++..-.. +.-.-.+|++.+++++ ||||+++.+++. +++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~-----d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIR-----DND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhh-----ccC
Confidence 346799999999999999999999999999999999743322 1223468999999998 999999999853 334
Q ss_pred -ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 707 -FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 707 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
..++|||||+ .+|.+.++.+ .+.+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+
T Consensus 83 ~~L~fVfE~Md-~NLYqLmK~R---------~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~i 149 (538)
T KOG0661|consen 83 RILYFVFEFMD-CNLYQLMKDR---------NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVI 149 (538)
T ss_pred ceEeeeHHhhh-hhHHHHHhhc---------CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEeccccee
Confidence 8999999994 5999999743 34799999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+|+.+... ...+.++.|.+|+|||++. .+-|+.+.||||+|||++|+++-++.|.+..+-|..+.-..-.
T Consensus 150 KiaDFGLARev~Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VL 226 (538)
T KOG0661|consen 150 KIADFGLAREVRSK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVL 226 (538)
T ss_pred EecccccccccccC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHh
Confidence 99999999987543 3445677999999999865 4678999999999999999999999998865554332222111
Q ss_pred hCCch--hhh--hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDH--VVD--IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~--~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..|.. +.+ -+...+ .....+..+.....-...++.+..+++.+|++|||++||||+|.++.
T Consensus 227 GtP~~~~~~eg~~La~~m-------nf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 227 GTPDKDSWPEGYNLASAM-------NFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCccccchhHHHHHHHh-------ccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111 000 000000 00000000001111112366788999999999999999999999874
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-42 Score=358.13 Aligned_cols=278 Identities=23% Similarity=0.261 Sum_probs=211.6
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.+.|+.+++||+|.||.||+|++..+++.||+|+++... ++......+|+.+|++++||||+++.+...+. ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 345777899999999999999999999999999997543 55567778999999999999999999986533 3468
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.|+|+|||+. ||..++... ...+++.++..++.|++.||+|+|++ ||+|||||.+|||||.+|.+||
T Consensus 193 iYlVFeYMdh-DL~GLl~~p---------~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKi 259 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSP---------GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKI 259 (560)
T ss_pred EEEEEecccc-hhhhhhcCC---------CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEe
Confidence 9999999976 888888532 33699999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||+|+++...... ..+..+.|.+|+|||.+.|. .|+.+.|+||.|||+.||++|++.|.+..+-+ ..+.+....
T Consensus 260 aDFGLAr~y~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve--Ql~kIfklc 336 (560)
T KOG0600|consen 260 ADFGLARFYTPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE--QLHKIFKLC 336 (560)
T ss_pred ccccceeeccCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH--HHHHHHHHh
Confidence 999999988654332 35667799999999998886 69999999999999999999999998643322 222222211
Q ss_pred --Cch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 --PDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 --~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
|.+ .+... .+. .... ++..........+.....+....+++..+|..||.+|.||.++++
T Consensus 337 GSP~e~~W~~~--kLP-~~~~--~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 337 GSPTEDYWPVS--KLP-HATI--FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCCChhccccc--cCC-cccc--cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111 11111 111 0000 000000001111112345667889999999999999999999875
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-42 Score=355.61 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=204.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
..+|...+.||+|+||+||++...+++...|||.+........+.+.+|+.+|.+++|||||+++|..... ....++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~---~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR---ENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc---cCeeeE
Confidence 34578889999999999999999988889999999755433367789999999999999999999963221 113689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-CCcEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE-EMMAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~ 788 (953)
+.|||+++|+|.+++.... . .+++..+..+++||++||+|||++ |||||||||+|||++. ++.+||+
T Consensus 93 i~mEy~~~GsL~~~~~~~g--------~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~Kla 160 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG--------G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLA 160 (313)
T ss_pred eeeeccCCCcHHHHHHHcC--------C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEec
Confidence 9999999999999996332 1 589999999999999999999999 9999999999999999 7999999
Q ss_pred ccccceecCC-CCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 789 DFGLARFLPL-SPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 789 DfG~a~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|||.++.... ...........||+.|||||++.++ ...+++||||+||++.||+||+.||....... ........
T Consensus 161 DFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~---~~~~~ig~ 237 (313)
T KOG0198|consen 161 DFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA---EALLLIGR 237 (313)
T ss_pred cCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH---HHHHHHhc
Confidence 9999987653 1122333456799999999999853 34469999999999999999999998631110 11111110
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
..... ..+...+.+..+++.+|++.||++||||+|+++.--
T Consensus 238 ~~~~P---------------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 238 EDSLP---------------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred cCCCC---------------------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 00000 011134567889999999999999999999998643
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=347.95 Aligned_cols=263 Identities=22% Similarity=0.291 Sum_probs=208.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.+.|+..++||.|..++||+|+....++.||||++..... ...+.+.+|+..|+.++||||++++..|. .+...
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----VDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----eccee
Confidence 4579999999999999999999998889999999974332 23688999999999999999999998754 44889
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
|+||+||.+|++.+.++.... ..+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+
T Consensus 100 WvVmpfMa~GS~ldIik~~~~--------~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLa 168 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYP--------DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLA 168 (516)
T ss_pred EEeehhhcCCcHHHHHHHHcc--------ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEc
Confidence 999999999999999975443 3699999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCC-cccc-cccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 789 DFGLARFLPLSPA-QTSS-IDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 789 DfG~a~~~~~~~~-~~~~-~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
|||.+..+..... .... ...+||++|||||++... .|+.|+||||||++..|+.+|..||..+....+.+......
T Consensus 169 dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~ 248 (516)
T KOG0582|consen 169 DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND 248 (516)
T ss_pred CceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 9999876644331 1111 445799999999995543 69999999999999999999999998654433222221111
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. +...... ...++.......+.+++..|+++||.+||||+++++
T Consensus 249 p-p~~~t~~----------------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 249 P-PTLLTSG----------------------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred C-CCccccc----------------------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 0000000 011122234457999999999999999999999986
No 22
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=342.47 Aligned_cols=202 Identities=30% Similarity=0.396 Sum_probs=180.4
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
..++|++.++||+|+||.||.++.+++++.+|+|+++.. .....+...+|..++.+++||.||+++.. |++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 456799999999999999999999999999999999632 33456778899999999999999999876 7788
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..|+|+||+.||.|..++++ .+.+++..+.-++.+|+.||.|||+. |||||||||+|||+|.+|.+
T Consensus 98 ~kLylVld~~~GGeLf~hL~~----------eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi 164 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQR----------EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHI 164 (357)
T ss_pred CeEEEEEeccCCccHHHHHHh----------cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcE
Confidence 999999999999999999952 34789999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+|+|||+++..-.. .......+||+.|||||++.+..|+.++|.||+|+++|||++|.+||..
T Consensus 165 ~LtDFgL~k~~~~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 165 KLTDFGLCKEDLKD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred EEeccccchhcccC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 99999999854322 2233346899999999999999999999999999999999999999975
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=355.87 Aligned_cols=254 Identities=23% Similarity=0.322 Sum_probs=208.2
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.....+|..++.||+|+|++||+|+.+.+++.||||++.. ..+...+.+..|-++|.++ .||.|++++-. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 3445679999999999999999999999999999999853 2233345677888999999 89999999977 6
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
++....|+|+||+++|+|.+++++. +.+++...+-+|.+|+.|++|||++ |||||||||+|||+|+|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~----------Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~d 210 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKY----------GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKD 210 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHh----------CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCC
Confidence 7778999999999999999999743 3689999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCc---------ccc--cccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 783 MMAHVSDFGLARFLPLSPAQ---------TSS--IDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
+++||+|||.|+.+++.... ... ...+||..|.+||++.+...++++|+|||||++|+|+.|.+||...
T Consensus 211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 99999999999988643221 111 4477999999999999999999999999999999999999999753
Q ss_pred ccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 852 FEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+- ..+ +.+++- .++.+...++...+|+.+.+..||.+|+|++||.+
T Consensus 291 Ney----liF---------qkI~~l--------------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 291 NEY----LIF---------QKIQAL--------------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred cHH----HHH---------HHHHHh--------------------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 221 111 111110 01111133456889999999999999999988876
No 24
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=359.78 Aligned_cols=250 Identities=21% Similarity=0.295 Sum_probs=209.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
..|...++||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||.+++.|. ..++.|+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccceeEE
Confidence 34677789999999999999999999999999998777767778899999999999999999998853 3488999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
|||||+||+|.+.+. ...+++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+||
T Consensus 348 VMEym~ggsLTDvVt-----------~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVT-----------KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred EEeecCCCchhhhhh-----------cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeee
Confidence 999999999999994 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|++..+.... ......+||++|||||+.....|+++.||||||++++||+.|.+||-. + ..+.........
T Consensus 414 GFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E-~PlrAlyLIa~n--- 484 (550)
T KOG0578|consen 414 GFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---E-NPLRALYLIATN--- 484 (550)
T ss_pred eeeecccccc--CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC---C-ChHHHHHHHhhc---
Confidence 9998875433 344567899999999999999999999999999999999999999853 1 111111110000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.......+...+.++.+++.+|++.||++||+|.|+++
T Consensus 485 -----------------------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 485 -----------------------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -----------------------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 00111223356778999999999999999999999987
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=389.38 Aligned_cols=271 Identities=25% Similarity=0.395 Sum_probs=223.0
Q ss_pred CcccCcccccceeeEEEEEEcCCC-----eEEEEEEeec-cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 633 FASANEIGVGSFGSVYKGILDQGK-----TTVAVKVFNL-LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
....+.||+|+||.||.|+..+.. ..||+|.++. .+.+...+|.+|..+|++++|||||+++|+|.. ..
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-----~~ 768 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-----SG 768 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----CC
Confidence 345678999999999999986543 2499999864 456677899999999999999999999999864 37
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..+|++|||++|||..|++..+.... ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....||
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~---~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPF---QPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccC---CCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEE
Confidence 78999999999999999986654322 256799999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||+|+.+...+.........-+..|||||.+.++.++.|+|||||||++||++| |..||......+. ..
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v--~~----- 915 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV--LL----- 915 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--HH-----
Confidence 999999996644444433333345679999999999999999999999999999999 9999976322211 00
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHHhccccc
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNILLGHRI 945 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 945 (953)
.+ ..+.|.+.+..|++.++++|..||+.+|++||++..+++.+..+.....+...
T Consensus 916 ------~~-------------------~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~ 970 (1025)
T KOG1095|consen 916 ------DV-------------------LEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIY 970 (1025)
T ss_pred ------HH-------------------HhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcc
Confidence 00 01123445557899999999999999999999999999999999988877654
Q ss_pred c
Q 043900 946 V 946 (953)
Q Consensus 946 ~ 946 (953)
.
T Consensus 971 ~ 971 (1025)
T KOG1095|consen 971 G 971 (1025)
T ss_pred c
Confidence 3
No 26
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=363.73 Aligned_cols=388 Identities=21% Similarity=0.218 Sum_probs=222.7
Q ss_pred ceeecCCCccCcCCCccCCCC--CCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeecc
Q 043900 31 KVLLLYNNSFNHGIPSEFDRL--QRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVS 108 (953)
Q Consensus 31 ~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (953)
..||++++.+..+....+.++ ..-++|||++|.+....+..|.++++|+++++.+|.++ .+|...+...+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 556666666665433334333 23344666666666555555666666666666666666 555544444556666666
Q ss_pred ccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCccccccc
Q 043900 109 VNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVI 188 (953)
Q Consensus 109 ~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 188 (953)
+|.|+..-.++++.++.|+.||||.|.|+.+.-.+|..-.++++|+|++|+|+......|.++.+|..|.|+.|+|+
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit--- 210 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT--- 210 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc---
Confidence 66666554555666666666666666666444455555556666666666666444555555555555555555555
Q ss_pred ccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCcccccc
Q 043900 189 PLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLC 268 (953)
Q Consensus 189 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~ 268 (953)
...+..|.+|++|+.|+|..|++.... .
T Consensus 211 ----------------------tLp~r~Fk~L~~L~~LdLnrN~irive-~----------------------------- 238 (873)
T KOG4194|consen 211 ----------------------TLPQRSFKRLPKLESLDLNRNRIRIVE-G----------------------------- 238 (873)
T ss_pred ----------------------ccCHHHhhhcchhhhhhccccceeeeh-h-----------------------------
Confidence 334444555555555555555544110 0
Q ss_pred cccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCC
Q 043900 269 SLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQN 348 (953)
Q Consensus 269 ~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 348 (953)
-.|..+ ++|+.|.|..|.|+.....+|..+.++++|+|+.|+++..-.+++-+++.
T Consensus 239 -----------------------ltFqgL-~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~ 294 (873)
T KOG4194|consen 239 -----------------------LTFQGL-PSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTS 294 (873)
T ss_pred -----------------------hhhcCc-hhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccch
Confidence 001111 35666666666666666677777888888888888887777777788888
Q ss_pred CCeEEeccccccCCCCCCCCCceeeEEEccCCcCCCCCCccCCCCCCCcEEEcCCCccCCCCCccccCccccceeeeccC
Q 043900 349 LRELRLQRNKFLGNIPPSIGNLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSR 428 (953)
Q Consensus 349 L~~L~L~~N~l~~~~p~~~~~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~ 428 (953)
|+.|+||+|.|..+. ++++...++|++|+|++|+|+ .++++-+.....+++|+|+.
T Consensus 295 L~~L~lS~NaI~rih-----------------------~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~ 350 (873)
T KOG4194|consen 295 LEQLDLSYNAIQRIH-----------------------IDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSH 350 (873)
T ss_pred hhhhccchhhhheee-----------------------cchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccc
Confidence 888888777776533 344444445555555555554 33333333333444555555
Q ss_pred CcccCCCCccccCCCccceeeecCCcccccCCC---CccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCcccc
Q 043900 429 NQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPS---TLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNLSG 505 (953)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 505 (953)
|.|+..-..+|.++++|+.|||++|.|+..+.+ .|.+|++|+.|+|.+|+|..+.-.+|.++..|+.|||.+|.|..
T Consensus 351 Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 351 NSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred cchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 555544455555666666666666666544432 34556666666666666664444556666666666666666665
Q ss_pred cCCccccccccCceEecc
Q 043900 506 KIPEFLVGFQLLENLNLS 523 (953)
Q Consensus 506 ~~p~~~~~l~~L~~l~l~ 523 (953)
.-|++|..| .|+.|-++
T Consensus 431 Iq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 431 IQPNAFEPM-ELKELVMN 447 (873)
T ss_pred ecccccccc-hhhhhhhc
Confidence 556666655 55555443
No 27
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-41 Score=338.21 Aligned_cols=291 Identities=21% Similarity=0.236 Sum_probs=218.7
Q ss_pred HHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 625 NLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 625 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
+.+.....|...+.||+|+||.|+.|.+..+++.||+|++. ....-..++..+|+++++.++|+||+.+.+++.....
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 34455667777899999999999999999999999999996 4455567888999999999999999999999766445
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
..-..+|+|+|+| +.+|...++. ...++...+.-+.+|+++||+|+|+. +|+|||+||+|++++.+
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~----------~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~ 161 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKS----------QQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNAD 161 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHc----------CccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccC
Confidence 5567899999999 6699999962 23489999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
...||+|||+|+...........+..+.|.+|+|||++. ...|+.+.||||.||++.||++|++.|.+...-+ ....
T Consensus 162 c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~--Ql~l 239 (359)
T KOG0660|consen 162 CDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH--QLQL 239 (359)
T ss_pred CCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH--HHHH
Confidence 999999999999886544455667788999999999854 4589999999999999999999999998632221 1111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccc-hhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQ-RQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.....+..-.+.+. .+............. .++...........+...+++.+|+..||.+|+|++|.++.
T Consensus 240 I~~~lGtP~~e~l~-~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 240 ILELLGTPSEEDLQ-KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhcCCCCHHHHH-HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 22222111111110 000000000111111 11111111122445678899999999999999999999873
No 28
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=329.23 Aligned_cols=281 Identities=22% Similarity=0.282 Sum_probs=210.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.+.|+..++|++|.||.||+|+++.+++.||+|+++...+ +-.-...+|+.++.+.+|||||.+-.+.++. +-+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---ccce
Confidence 4568889999999999999999999999999999975432 2234568999999999999999999997754 3356
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.|+|||||+. ||...+.... .++...++..++.|+++|++|||.+ .|+|||||++|+|++..|.+||
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~---------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKi 218 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMK---------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKI 218 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhcc---------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEe
Confidence 9999999966 8988886443 3689999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||+|+.++.. ....+..+.|.+|+|||.+.|. .|+.+.|+||+|||+.|++++++.|.+..+-++...-+.....
T Consensus 219 aDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt 296 (419)
T KOG0663|consen 219 ADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT 296 (419)
T ss_pred cccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC
Confidence 999999988543 3445667789999999998876 6999999999999999999999999875544432222222222
Q ss_pred Cch--hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDH--VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
|.+ +..+..-..... ..+..+. ...-..++... ...+.-++++...+..||++|.||+|.++
T Consensus 297 Pte~iwpg~~~lp~~k~-~~f~~~p-yn~lr~kF~~~-~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 297 PSEAIWPGYSELPAVKK-MTFSEHP-YNNLRKKFGAL-SLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccCCCccccchhhc-cccCCCC-chhhhhhcccc-ccchhHHHHHHHHhccCccccccHHHhhc
Confidence 221 111110000000 0000000 00000111111 13456778999999999999999999875
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.5e-40 Score=362.68 Aligned_cols=271 Identities=24% Similarity=0.353 Sum_probs=207.3
Q ss_pred hcCCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.++|++.++||+|+||.||+|.+. ..++.||+|+++... ....+.+.+|+.+++++ +||||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK--- 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC---
Confidence 457999999999999999999852 234579999997432 33456789999999999 89999999998742
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCc--------------------------------------------------
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDK-------------------------------------------------- 732 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------------------------------------------------- 732 (953)
.+...++||||+++|+|.+++........
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 83 -PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred -CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 33568999999999999999864321100
Q ss_pred --ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCccccccccc
Q 043900 733 --TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKG 810 (953)
Q Consensus 733 --~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~g 810 (953)
.......+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...............+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 001124588999999999999999999999 999999999999999999999999999986543322222233446
Q ss_pred ccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcc
Q 043900 811 SIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHG 889 (953)
Q Consensus 811 t~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 889 (953)
+..|+|||++.+..++.++|||||||++|||++ |..||......+ ...... .+....
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~-----------~~~~~~---------- 296 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRL-----------KDGTRM---------- 296 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHH-----------hcCCCC----------
Confidence 788999999999999999999999999999997 999997532211 010000 000000
Q ss_pred cchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 890 NQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
..+..+++++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 297 ---------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 297 ---------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0001234568899999999999999999999999998764
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=347.31 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=206.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
...|+..+.||+|+||.||+|.+..+++.||+|++... .....++.++|+.++..++++||.++++.+ -.+...
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy-----l~g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY-----LKGTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe-----eecccH
Confidence 34577789999999999999999999999999999843 345578899999999999999999999984 445789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
+++||||.||++.+.++. ...+.+.++.-|++++..|+.|||.+ +.+|||||+.||++..+|.||++
T Consensus 87 wiiMey~~gGsv~~lL~~----------~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~ 153 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKS----------GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLA 153 (467)
T ss_pred HHHHHHhcCcchhhhhcc----------CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEE
Confidence 999999999999999963 22347777888999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+..+... .......+||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+......
T Consensus 154 DfgVa~ql~~~--~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-------------- 217 (467)
T KOG0201|consen 154 DFGVAGQLTNT--VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-------------- 217 (467)
T ss_pred ecceeeeeech--hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--------------
Confidence 99999877533 23335678999999999999989999999999999999999999999764331
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.-.+.+.-.+ ..+. .+.+.+.+++..|+.+||+.||+|.++++
T Consensus 218 rvlflIpk~~PP----------------~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 218 RVLFLIPKSAPP----------------RLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred eEEEeccCCCCC----------------cccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111111111111 1111 45677999999999999999999999976
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.2e-40 Score=348.43 Aligned_cols=247 Identities=27% Similarity=0.408 Sum_probs=207.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|.+.+.||+|+||.||||+.+.+.+.||+|.+.+. .+++.+.+.+|++++++++||||+.++++ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 4688899999999999999999999999999999643 34456789999999999999999999998 5566899
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
|+|+||+.| +|..++. ....+++..+..|+.|++.||.|||+. +|.|||+||.|||++.++.+|++
T Consensus 77 ~vVte~a~g-~L~~il~----------~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~Klc 142 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILE----------QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLC 142 (808)
T ss_pred EEEehhhhh-hHHHHHH----------hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeec
Confidence 999999976 9999995 345799999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||+|+.+.. .....+...|||.|||||...+++|+..+|+||+||++||+++|++||... .+.+.++....+
T Consensus 143 dFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d 215 (808)
T KOG0597|consen 143 DFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKD 215 (808)
T ss_pred hhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcC
Confidence 9999997643 333445567999999999999999999999999999999999999999631 112222222111
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+. .+......+..++...+.+||..|.|..+++.
T Consensus 216 ~v~----------------------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 PVK----------------------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CCC----------------------------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 100 01134566889999999999999999999876
No 32
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=336.39 Aligned_cols=283 Identities=26% Similarity=0.330 Sum_probs=210.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc--CCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI--RHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
......+.||+|.||.||+|...+ +.||||++.. ...+.|.+|-++.+.. +|+||++++++-...+.. ..++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~--~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN--RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC--ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 344567889999999999999977 5899999964 3456777777776654 899999999884333222 4578
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhC------CCCCeEeecCCCCCeEecCC
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHD------CQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------~~~~ivH~Dlkp~NIll~~~ 782 (953)
++|+||.+.|+|.+|++ ...++|....+|+.-+++||+|||+. .+++|+|||||++||||..|
T Consensus 284 wLVt~fh~kGsL~dyL~-----------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLK-----------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred eEEeeeccCCcHHHHHH-----------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 99999999999999996 34689999999999999999999976 46889999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCC------CCcccchHHHHHHHHHHHhCCCCCCC--cccC
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE------VSINGDVYSYGILLLELVTRKKPVDS--MFEG 854 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDv~slG~vl~elltg~~pf~~--~~~~ 854 (953)
+++.|+|||+|..+............+||.+|||||++.+.. .-.+.||||+|.|+||++++..-++. ..+-
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 999999999999987766666666688999999999988753 22468999999999999997655431 1111
Q ss_pred CccHHHHHHhh-CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 855 DMNLHNFARMA-LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 855 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
...+..-+... .-+++++. .++...++.-............+.+.+..||..||+.|.|+.=|.+++
T Consensus 433 qlpfe~evG~hPt~e~mq~~------------VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQEL------------VVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred cCchhHHhcCCCCHHHHHHH------------HHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 22222111111 00111111 111111111111222224456789999999999999999999999999
Q ss_pred HHHHHHhcc
Q 043900 934 QSIKNILLG 942 (953)
Q Consensus 934 ~~i~~~~~~ 942 (953)
.++...-+.
T Consensus 501 ~~l~~~~~~ 509 (534)
T KOG3653|consen 501 AELMMLWED 509 (534)
T ss_pred HHHhccCCc
Confidence 998776543
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=315.94 Aligned_cols=271 Identities=18% Similarity=0.255 Sum_probs=217.3
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.+|+|||+-||.++.-.+++.||+|++.....+..+..++|++..++++|||++++++++.....+.....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 46899999999999999999999888889999999877777888999999999999999999999998665455567799
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
++++|+..|+|.+.+.....+ +..+++.++++|+.+|++||++||+. .++++||||||.||++.+++.+++.|
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~k------g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIK------GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred EEeehhccccHHHHHHHHhhc------CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEe
Confidence 999999999999999755433 34799999999999999999999998 44599999999999999999999999
Q ss_pred cccceecCCCCCc-------ccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 790 FGLARFLPLSPAQ-------TSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 790 fG~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
||.++..+..-.. ........|..|+|||.+. +...++++|||||||++|+|+.|..||+........+.
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla 252 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA 252 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence 9999765321111 1112234789999999764 55678999999999999999999999986433221111
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
- .+... +..++.....++.+.+++.+|++.||.+||++.|++..++.+
T Consensus 253 L-----------Av~n~------------------q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 L-----------AVQNA------------------QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred E-----------eeecc------------------ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 0 00000 001111112567799999999999999999999999988765
No 34
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=347.76 Aligned_cols=244 Identities=23% Similarity=0.382 Sum_probs=201.1
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
...+.+|.|+.|.||+|+.++. .||||+++... ..+++-|++++||||+.+.|+|... ..+|||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~ne--tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiME 192 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLHNE--TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIME 192 (904)
T ss_pred hhhhhhccCcccceeeeeccCc--eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCC-----ceeEEeee
Confidence 3467899999999999999874 69999875322 3478889999999999999998654 77999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
||+.|-|.++++ ..+.++......|..+||.||.|||.+ .|||||||+-||||+.+..|||+|||-+
T Consensus 193 fCa~GqL~~VLk----------a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 193 FCAQGQLYEVLK----------AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred ccccccHHHHHh----------ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccch
Confidence 999999999996 344688888999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDI 873 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (953)
+..... .......||..|||||++...+.++|+||||||||||||+||..||.+...... ++..-...
T Consensus 260 ~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----IwGVGsNs---- 327 (904)
T KOG4721|consen 260 KELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----IWGVGSNS---- 327 (904)
T ss_pred Hhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-----EEeccCCc----
Confidence 876432 334456799999999999999999999999999999999999999976422211 00000000
Q ss_pred ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 874 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 874 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
....-+..|++.+.-+++.||+..|..||++.+++..|+-...
T Consensus 328 ----------------------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 328 ----------------------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred ----------------------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 0111233788889999999999999999999999998876543
No 35
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=343.22 Aligned_cols=263 Identities=23% Similarity=0.337 Sum_probs=211.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
...+.++||+|-||+|..++... ...||||+++..... ...+|.+|+++|.+++||||++++|+|... +..++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D-----ePicm 612 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD-----DPLCM 612 (807)
T ss_pred heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC-----CchHH
Confidence 45677899999999999999877 458999999865444 458999999999999999999999999643 77999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
|+|||++|+|.+|+..+... ...-....+|+.||+.||+||.+. ++||||+.++|+|++.++++||+||
T Consensus 613 I~EYmEnGDLnqFl~aheap--------t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadf 681 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELP--------TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADF 681 (807)
T ss_pred HHHHHhcCcHHHHHHhccCc--------ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCc
Confidence 99999999999999755332 134445567999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh--CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT--RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|+++-+-.++........+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....+++. .+
T Consensus 682 gmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ve-------- 751 (807)
T KOG1094|consen 682 GMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VE-------- 751 (807)
T ss_pred ccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HH--------
Confidence 99997766666666666677899999999999999999999999999999987 7788876433321 11
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
...++.+..- +..-...+.-|+.+++++|.+||..|-++||+++++...|.+.
T Consensus 752 n~~~~~~~~~---------------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 752 NAGEFFRDQG---------------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhhhcCCCC---------------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1111111100 0011122335788899999999999999999999999988764
No 36
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=335.59 Aligned_cols=287 Identities=23% Similarity=0.292 Sum_probs=208.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
.|...+++|.|+||.||+|....+.+.||||+.-.... .-.+|+++|++++|||||++.-+|......+.-...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 46778999999999999999999988999999853322 23479999999999999999988765533323456799
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC-CcEEEecc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE-MMAHVSDF 790 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Df 790 (953)
||||+. +|.++++.... ....++...+.-++.||.+||+|||+. +|+||||||.|+|+|.+ |.+|||||
T Consensus 101 leymP~-tL~~~~r~~~~------~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTR------ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred HHhchH-HHHHHHHHHhh------cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccC
Confidence 999976 99999864322 245688888999999999999999998 99999999999999965 89999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.|+....+... .....|..|+|||.+.|. .|+.+.||||.|||+.||+-|++-|.+....+ .+...+.. +...
T Consensus 171 GSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~d-QL~eIik~-lG~P 245 (364)
T KOG0658|consen 171 GSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVD-QLVEIIKV-LGTP 245 (364)
T ss_pred CcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHH-HHHHHHHH-hCCC
Confidence 999988654433 445689999999998886 69999999999999999999999998732222 22222222 2222
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSIKNI 939 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~~ 939 (953)
..+.+..+-.. ..+.....-......+ -.....+++..+++.++++++|.+|.++.|++.. +.++++.
T Consensus 246 t~e~I~~mn~~-y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 246 TREDIKSMNPN-YTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CHHHHhhcCcc-cccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 12212111111 0000000000000000 0122456788999999999999999999999863 5555443
No 37
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=350.75 Aligned_cols=256 Identities=23% Similarity=0.301 Sum_probs=206.6
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc----ch-hhHHHHHHHHHHHhhcC-CCCeeEEEeeecccc
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL----HH-GAFKSFIAECNTLKNIR-HRNLVKILTACSGVD 701 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 701 (953)
.....|.+.+.||+|+||.|+.|.+..+++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3456899999999999999999999998899999977542 11 33456778999999998 999999999954
Q ss_pred cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC
Q 043900 702 YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE 781 (953)
Q Consensus 702 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 781 (953)
.....++||||+.+|+|.+++.. ...+.+.++..++.|++.|++|+|++ ||+||||||+|||++.
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~----------~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~ 155 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVN----------KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDG 155 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHH----------cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecC
Confidence 34669999999999999999963 34688899999999999999999999 9999999999999999
Q ss_pred C-CcEEEeccccceecCCCCCcccccccccccccccccccCCCC-CC-cccchHHHHHHHHHHHhCCCCCCCcccCCccH
Q 043900 782 E-MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE-VS-INGDVYSYGILLLELVTRKKPVDSMFEGDMNL 858 (953)
Q Consensus 782 ~-~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDv~slG~vl~elltg~~pf~~~~~~~~~~ 858 (953)
+ +.+||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++. ..
T Consensus 156 ~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~ 228 (370)
T KOG0583|consen 156 NEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NV 228 (370)
T ss_pred CCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cH
Confidence 9 999999999999764 2233445567999999999999987 86 7899999999999999999999861 11
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHH-HHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIEC-LVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
....+..... .+..+..+ ++++..++.+|+..||.+|+|+.|++ .-.-++
T Consensus 229 ~~l~~ki~~~----------------------------~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 229 PNLYRKIRKG----------------------------EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred HHHHHHHhcC----------------------------CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 1111110000 00011122 55688999999999999999999999 444443
No 38
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-41 Score=353.91 Aligned_cols=390 Identities=24% Similarity=0.241 Sum_probs=283.4
Q ss_pred EEEEEeCCCeeeeecCc-cccCC--ccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEe
Q 043900 6 VKILNLTSLKLAGSISP-HVGNL--SFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIR 82 (953)
Q Consensus 6 ~~~l~l~~~~~~~~~~~-~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 82 (953)
...||.+..++. .+.. .+..+ ..-+.|++++|+++.+.+..|.++++|++++|.+|.++ .+|.......+|+.|+
T Consensus 54 ~~lldcs~~~le-a~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 54 TRLLDCSDRELE-AIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred ceeeecCccccc-cccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 456788887775 3211 22222 24577999999999999999999999999999999999 9999888888999999
Q ss_pred ccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccC
Q 043900 83 LFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSG 162 (953)
Q Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (953)
|.+|.|+.+-.+++.-++.|+.||||.|.|+.+.-.+|..-.++++|+|++|+|+....+.|.++.+|.+|.|++|+|+.
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 99999998888899999999999999999996555688888899999999999999999999999999999999999995
Q ss_pred CCCCcccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCC
Q 043900 163 TIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEK 242 (953)
Q Consensus 163 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~ 242 (953)
..+..|.++++|+.|||..|+|.-+....| .+|++|+.|.|..|.|.......|-.|.++++|+|+.|+++..-..+
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltF-qgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~-- 288 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTF-QGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGW-- 288 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhh-cCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccc--
Confidence 445567779999999999999984334444 48999999999999999888889999999999999999998654321
Q ss_pred CCccceeeecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCC
Q 043900 243 PQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKF 322 (953)
Q Consensus 243 ~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l 322 (953)
++++ ++|+.|+|++|.|..+.++++...
T Consensus 289 ---------------------------------------------------lfgL-t~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 289 ---------------------------------------------------LFGL-TSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred ---------------------------------------------------cccc-chhhhhccchhhhheeecchhhhc
Confidence 2222 345555555555555555555555
Q ss_pred CCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCceeeEEEccCCcCCCCCCccCCCCCCCcEEEcC
Q 043900 323 VNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLS 402 (953)
Q Consensus 323 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 402 (953)
++|+.|+|++|+|+...+++|..+..|++|+|++|+|... ...+|..+++|+.|||+
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l-----------------------~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHL-----------------------AEGAFVGLSSLHKLDLR 373 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHH-----------------------HhhHHHHhhhhhhhcCc
Confidence 5555666666665555555555555555555555555421 12233333444444444
Q ss_pred CCccCCCCCcc--ccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccC
Q 043900 403 DNNLTGTIPPQ--FLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQG 476 (953)
Q Consensus 403 ~N~l~~~~p~~--~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 476 (953)
+|.|+..+.+. .+.....++.|+|.+|+|..+...+|.++.+|+.|||.+|.|..+-|.+|..+ .|++|.+..
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 44443333221 11112233344444444444444577777888888888888877777778777 777776543
No 39
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=353.80 Aligned_cols=261 Identities=26% Similarity=0.400 Sum_probs=209.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCC---eE-EEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGK---TT-VAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~-vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
.++....++||+|+||.||+|+.+..+ .. ||||..+. .......++++|+++|++++|||||+++|++..
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~--- 232 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL--- 232 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC---
Confidence 334455689999999999999987542 23 89999974 446678899999999999999999999999654
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
....++|||+|+||+|.++++.... .++..++..++.++|.||+|||++ +++||||.++|+|++.+
T Consensus 233 --~~Pl~ivmEl~~gGsL~~~L~k~~~---------~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 233 --EEPLMLVMELCNGGSLDDYLKKNKK---------SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKK 298 (474)
T ss_pred --CCccEEEEEecCCCcHHHHHHhCCC---------CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCC
Confidence 3789999999999999999974432 489999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||+++.-. ..........-+..|+|||.+....|++++|||||||++||+++ |..||.+....+ ...+
T Consensus 299 ~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~~k 374 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VKAK 374 (474)
T ss_pred CeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HHHH
Confidence 999999999997542 11111112246789999999999999999999999999999999 889998643321 1111
Q ss_pred H-HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHHh
Q 043900 862 A-RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNIL 940 (953)
Q Consensus 862 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 940 (953)
+ .... +...+...+.++..++.+||..||++||||.++.+.++.+....
T Consensus 375 I~~~~~------------------------------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 375 IVKNGY------------------------------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred HHhcCc------------------------------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 1 1000 11111134667889999999999999999999999999998765
Q ss_pred c
Q 043900 941 L 941 (953)
Q Consensus 941 ~ 941 (953)
.
T Consensus 425 ~ 425 (474)
T KOG0194|consen 425 E 425 (474)
T ss_pred c
Confidence 5
No 40
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=342.65 Aligned_cols=254 Identities=24% Similarity=0.390 Sum_probs=214.6
Q ss_pred cccCcccccceeeEEEEEEcCC----CeEEEEEEeec-cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 634 ASANEIGVGSFGSVYKGILDQG----KTTVAVKVFNL-LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
...+.||+|.||.||+|.+.+- .-.||||..+. ...+..+.|..|+.+|+.++||||++++|+|.+ ...
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------~P~ 465 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------QPM 465 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------cce
Confidence 3457899999999999998433 34599999875 445567889999999999999999999999864 568
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
|||||.++.|.|..|++... ..++......++.||+.||+|||+. .+|||||..+||||.....|||+
T Consensus 466 WivmEL~~~GELr~yLq~nk---------~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLa 533 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK---------DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLA 533 (974)
T ss_pred eEEEecccchhHHHHHHhcc---------ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeec
Confidence 99999999999999997544 3588899999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|||+++.+..+..... ....-++.|||||.+.-++++.+||||-|||++||+++ |..||.+....|...
T Consensus 534 DFGLSR~~ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~--------- 603 (974)
T KOG4257|consen 534 DFGLSRYLEDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG--------- 603 (974)
T ss_pred ccchhhhccccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE---------
Confidence 9999998865544333 34456789999999999999999999999999999999 999998765543211
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
....+.|.+.+..|++.++.+|.+||++||.+||++.|+...|+++..
T Consensus 604 -----------------------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 -----------------------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -----------------------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 011123444556899999999999999999999999999999999876
No 41
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=330.32 Aligned_cols=259 Identities=23% Similarity=0.310 Sum_probs=201.2
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--------------hhhHHHHHHHHHHHhhcCCCCeeEE
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--------------HGAFKSFIAECNTLKNIRHRNLVKI 693 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~e~~~l~~l~h~niv~~ 693 (953)
...+.|++.+.||+|.||.|-+|.+..+++.||+|++.... ....+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45678999999999999999999999999999999995211 1123588999999999999999999
Q ss_pred EeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 694 LTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 694 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
+.+..+ ...+..|||+|||..|.+...-. ....+++.++++++++++.||+|||.+ ||||||||
T Consensus 174 iEvLDD---P~s~~~YlVley~s~G~v~w~p~----------d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIK 237 (576)
T KOG0585|consen 174 IEVLDD---PESDKLYLVLEYCSKGEVKWCPP----------DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIK 237 (576)
T ss_pred EEeecC---cccCceEEEEEeccCCccccCCC----------CcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccc
Confidence 998543 45578999999998877654331 122389999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeccccceecCCCCCc---ccccccccccccccccccCCCC----CCcccchHHHHHHHHHHHhCCC
Q 043900 774 PSNVLLDEEMMAHVSDFGLARFLPLSPAQ---TSSIDAKGSIGYIAPEYGLGSE----VSINGDVYSYGILLLELVTRKK 846 (953)
Q Consensus 774 p~NIll~~~~~~kL~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~ 846 (953)
|+|+|++++|+|||+|||.+.....+... ......+|||.|+|||...++. .+.+.||||+||+||.|+.|+.
T Consensus 238 PsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~ 317 (576)
T KOG0585|consen 238 PSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL 317 (576)
T ss_pred hhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence 99999999999999999999876332111 1122356999999999987742 3577899999999999999999
Q ss_pred CCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 847 PVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 847 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
||-+.+.- . . ...++...+ .++...+..+++.+++.++|++||+.|.+.
T Consensus 318 PF~~~~~~----~-l--------~~KIvn~pL------------------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l 366 (576)
T KOG0585|consen 318 PFFDDFEL----E-L--------FDKIVNDPL------------------EFPENPEINEDLKDLIKRLLEKDPEQRITL 366 (576)
T ss_pred CcccchHH----H-H--------HHHHhcCcc------------------cCCCcccccHHHHHHHHHHhhcChhheeeh
Confidence 99652211 0 0 111111111 111122455678999999999999999999
Q ss_pred HHHHHHH
Q 043900 927 TNVVRQL 933 (953)
Q Consensus 927 ~evl~~L 933 (953)
.+|....
T Consensus 367 ~~ik~Hp 373 (576)
T KOG0585|consen 367 PDIKLHP 373 (576)
T ss_pred hhheecc
Confidence 9987643
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-39 Score=346.03 Aligned_cols=249 Identities=22% Similarity=0.275 Sum_probs=208.8
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
..-|+.++.||.|+-|.|-.|++..+++.+|||++... .......+.+|+-+|+-+.||||++++++ |++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 34688999999999999999999999999999999533 22334667899999999999999999999 67779
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
++|+|.||+++|-|.+++. ..+.+++.+..++++||+.|+.|+|+. +|+|||+||+|+|+|..+++|
T Consensus 86 ~lylvlEyv~gGELFdylv----------~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLV----------RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred eEEEEEEecCCchhHHHHH----------hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEe
Confidence 9999999999999999995 345799999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||+|..-.++ ..-...+|+++|.|||++.|.+|. .++||||+|||+|.|+||+.||++ .++.......
T Consensus 153 IADFGMAsLe~~g---klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlKV 224 (786)
T KOG0588|consen 153 IADFGMASLEVPG---KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLKV 224 (786)
T ss_pred eeccceeecccCC---ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHHH
Confidence 9999999864332 233345799999999999999985 889999999999999999999983 2333332222
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... .++-+..++.+..+++.+|+..||++|.|++||.+.
T Consensus 225 ~~G----------------------------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 225 QRG----------------------------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HcC----------------------------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 111 111122456778999999999999999999999874
No 43
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.7e-39 Score=337.77 Aligned_cols=254 Identities=20% Similarity=0.285 Sum_probs=201.7
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
..++|..+..||+|+||+||+|+-++++..+|+|+++.. ..+..+.+..|-.+|...++|.||+++-. |++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 457899999999999999999999999999999999743 34556778899999999999999999977 6788
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..|+||||++|||+..++.. ...+++..+..++.+++-|++.+|+. |+|||||||+|+|||..|++
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~----------~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHi 280 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMR----------KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHI 280 (550)
T ss_pred CeeEEEEEecCCccHHHHHHh----------cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCE
Confidence 999999999999999999952 34789999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCC---------------------CCcc-----cc-------------------ccccccccccccccc
Q 043900 786 HVSDFGLARFLPLS---------------------PAQT-----SS-------------------IDAKGSIGYIAPEYG 820 (953)
Q Consensus 786 kL~DfG~a~~~~~~---------------------~~~~-----~~-------------------~~~~gt~~y~aPE~~ 820 (953)
||+|||++.-+... .... .. ...+|||.|||||++
T Consensus 281 KLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVl 360 (550)
T KOG0605|consen 281 KLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVL 360 (550)
T ss_pred eeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHH
Confidence 99999999543210 0000 00 123499999999999
Q ss_pred CCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhh
Q 043900 821 LGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINS 900 (953)
Q Consensus 821 ~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 900 (953)
.+..|+..+|.||+|||+|||+.|.+||......+ .+....... .. ..++.
T Consensus 361 l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr--~~--------------------------l~fP~ 411 (550)
T KOG0605|consen 361 LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQE-TYRKIVNWR--ET--------------------------LKFPE 411 (550)
T ss_pred hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh--hh--------------------------ccCCC
Confidence 99999999999999999999999999997632221 111111100 00 00111
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCC---HHHHH
Q 043900 901 KIECLVAMVRIGVACSMESPGDRMN---MTNVV 930 (953)
Q Consensus 901 ~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl 930 (953)
...+.++..++|.+|+. ||+.|-. ++||.
T Consensus 412 ~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 412 EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 11344678899999998 9999975 55543
No 44
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-39 Score=360.19 Aligned_cols=266 Identities=22% Similarity=0.276 Sum_probs=213.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccc-cCC-CCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVD-YQG-NDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~-~~~ 707 (953)
.++++.+.|.+|||+.||.|++..++..||+|++-..++...+...+|+++|+.|+ |+|||.++|...... ... .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 45678899999999999999999887799999998778888899999999999996 999999999432221 222 257
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
+++.||||+||.|-+++..+... .+++.++++|+.|+++|+++||.. +++|||||||-+|||++.++..||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~--------~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT--------RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc--------cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEe
Confidence 88999999999999999644432 599999999999999999999986 788999999999999999999999
Q ss_pred eccccceecCCCCCcccc-------cccccccccccccc---cCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCcc
Q 043900 788 SDFGLARFLPLSPAQTSS-------IDAKGSIGYIAPEY---GLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMN 857 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~-------~~~~gt~~y~aPE~---~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~ 857 (953)
||||.|+-.-........ ....-|+.|+|||+ ..+...++|+||||+||+||.|+....||+....-
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--- 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--- 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---
Confidence 999999754332211111 12237899999997 45778999999999999999999999999752111
Q ss_pred HHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 858 LHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
.+++... .++.....+..+.+||..||+.||.+||++.||++.+.++.
T Consensus 265 --------------aIlng~Y------------------~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 265 --------------AILNGNY------------------SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred --------------eEEeccc------------------cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 1111110 11111245678999999999999999999999999999887
Q ss_pred HHh
Q 043900 938 NIL 940 (953)
Q Consensus 938 ~~~ 940 (953)
..-
T Consensus 313 ~~~ 315 (738)
T KOG1989|consen 313 NKP 315 (738)
T ss_pred cCC
Confidence 543
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.5e-38 Score=343.07 Aligned_cols=271 Identities=21% Similarity=0.341 Sum_probs=203.2
Q ss_pred cCCcccCcccccceeeEEEEEEcC----------------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ----------------GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKI 693 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~ 693 (953)
++|++.++||+|+||.||+|.+.+ ++..||+|+++... ......+.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999998643 33469999987542 3345678999999999999999999
Q ss_pred EeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcc---------cCCccccCHHHHHHHHHHHHHHHHHHhhCCC
Q 043900 694 LTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKT---------EEAPRSLNLLQRLNIGIDVACALSYLHHDCQ 764 (953)
Q Consensus 694 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 764 (953)
++++.. .+..++||||+++|+|.+++......... ......+++..+++++.||+.||+|||+.
T Consensus 85 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-- 157 (304)
T cd05096 85 LGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-- 157 (304)
T ss_pred EEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 999643 36789999999999999998643221111 11224578999999999999999999999
Q ss_pred CCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-
Q 043900 765 PPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT- 843 (953)
Q Consensus 765 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt- 843 (953)
+|+||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++
T Consensus 158 -~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 158 -NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred -CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 999999999999999999999999999986643332222233446789999999988899999999999999999997
Q ss_pred -CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCC
Q 043900 844 -RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGD 922 (953)
Q Consensus 844 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 922 (953)
|..||...... .................. ...+..++..+.+++.+||+.||++
T Consensus 237 ~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~cl~~~p~~ 291 (304)
T cd05096 237 CKEQPYGELTDE--QVIENAGEFFRDQGRQVY-----------------------LFRPPPCPQGLYELMLQCWSRDCRE 291 (304)
T ss_pred cCCCCCCcCCHH--HHHHHHHHHhhhcccccc-----------------------ccCCCCCCHHHHHHHHHHccCCchh
Confidence 55677643211 111111110000000000 0001134567899999999999999
Q ss_pred CCCHHHHHHHHH
Q 043900 923 RMNMTNVVRQLQ 934 (953)
Q Consensus 923 RPt~~evl~~L~ 934 (953)
|||++||.+.|+
T Consensus 292 RPs~~~i~~~l~ 303 (304)
T cd05096 292 RPSFSDIHAFLT 303 (304)
T ss_pred CcCHHHHHHHHh
Confidence 999999998886
No 46
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.1e-38 Score=352.56 Aligned_cols=269 Identities=23% Similarity=0.358 Sum_probs=205.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.++|++.+.||+|+||.||+|++.. +...||+|+++.. .......+.+|+++++.+ +|+||++++++|..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~--- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH--- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC---
Confidence 4578999999999999999998643 3347999999743 333456788999999999 89999999999643
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcC----------------------------------------------------
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITRE---------------------------------------------------- 730 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------------------------------------------------- 730 (953)
....++||||+++|+|.++++.....
T Consensus 114 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 114 --GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred --CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 46789999999999999998542210
Q ss_pred --------CcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCc
Q 043900 731 --------DKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQ 802 (953)
Q Consensus 731 --------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 802 (953)
.........+++.++++++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 00001223588999999999999999999999 9999999999999999999999999999866433222
Q ss_pred ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCC
Q 043900 803 TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSD 881 (953)
Q Consensus 803 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 881 (953)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .......... ...
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~------------~~~ 335 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY------------QMS 335 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc------------Ccc
Confidence 22223345678999999999999999999999999999997 999997532211 1111111000 000
Q ss_pred chhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 882 DEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
.+...++++.+++.+||+.||++|||+.||++.|+++.
T Consensus 336 ------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 ------------------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00012456889999999999999999999999999863
No 47
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-38 Score=336.82 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=198.3
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchh---hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG---AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
...||+|++|.||+|.+. ++.||||+++..... ..+.+.+|+.++++++||||+++++++.+. .......++||
T Consensus 25 ~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEE
Confidence 367999999999999984 468999999744322 246788999999999999999999997542 12345689999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++.....++.|++.|++|||+. .+++||||||+||++++++.+||+|||+
T Consensus 102 Ey~~~g~L~~~l~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~ 169 (283)
T PHA02988 102 EYCTRGYLREVLDK----------EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGL 169 (283)
T ss_pred EeCCCCcHHHHHhh----------CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccch
Confidence 99999999999963 23578999999999999999999973 1788999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 170 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-----~~~~~i~~~~- 238 (283)
T PHA02988 170 EKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-----EIYDLIINKN- 238 (283)
T ss_pred Hhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhcC-
Confidence 98653221 23458899999999876 68999999999999999999999999753211 1111100000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
. +...+..+++++.+++.+||+.||++|||++|+++.|+.+..
T Consensus 239 -------~------------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 239 -------N------------------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -------C------------------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 0 000011345679999999999999999999999999998753
No 48
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=321.92 Aligned_cols=273 Identities=23% Similarity=0.376 Sum_probs=210.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc--CCCCeeEEEeeecccccCCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI--RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 706 (953)
........+.||+|.||+||+|.|++. .||||++...++ +.+.+|.++.+.+ +|+||+.+++.-... -..-.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wrGe--~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~T 282 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWRGE--DVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWT 282 (513)
T ss_pred hhheeEEEEEecCccccceeeccccCC--ceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccC-CCceE
Confidence 445677889999999999999999876 599999965443 5667788877765 999999998772211 11124
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeecCCCCCeEecC
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHD-----CQPPITHCDLKPSNVLLDE 781 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~ 781 (953)
..++|++|.+.|||.||+.. ..++....++++.-+|.||+|||.. .+|.|+|||||+.||||..
T Consensus 283 QLwLvTdYHe~GSL~DyL~r-----------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk 351 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR-----------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 351 (513)
T ss_pred EEEEeeecccCCcHHHHHhh-----------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc
Confidence 68999999999999999963 3688899999999999999999965 5789999999999999999
Q ss_pred CCcEEEeccccceecCCCCC--cccccccccccccccccccCCC------CCCcccchHHHHHHHHHHHhC---------
Q 043900 782 EMMAHVSDFGLARFLPLSPA--QTSSIDAKGSIGYIAPEYGLGS------EVSINGDVYSYGILLLELVTR--------- 844 (953)
Q Consensus 782 ~~~~kL~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slG~vl~elltg--------- 844 (953)
++.+.|+|+|+|........ .......+||.+|||||++... ..-..+||||||.|+||+..+
T Consensus 352 n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 352 NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 99999999999987754422 2334556799999999997653 122458999999999999874
Q ss_pred -CCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCC
Q 043900 845 -KKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDR 923 (953)
Q Consensus 845 -~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 923 (953)
+.||.+....|..+.++.....-+.....+ +.++ ...++...+.++|+.||..+|+.|
T Consensus 432 y~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i--------------------pnrW-~s~~~l~~m~klMkeCW~~Np~aR 490 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI--------------------PNRW-KSDPALRVMAKLMKECWYANPAAR 490 (513)
T ss_pred hcCCcccCCCCCCCHHHHhcceeecccCCCC--------------------Cccc-ccCHHHHHHHHHHHHhhcCCchhh
Confidence 357777666666555443332222222111 1222 223567789999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 043900 924 MNMTNVVRQLQSIKNI 939 (953)
Q Consensus 924 Pt~~evl~~L~~i~~~ 939 (953)
-||-.+.+.|.++.+.
T Consensus 491 ltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 491 LTALRIKKTLAKLSNS 506 (513)
T ss_pred hHHHHHHHHHHHHhcC
Confidence 9999999999998753
No 49
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=341.78 Aligned_cols=255 Identities=27% Similarity=0.448 Sum_probs=215.9
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
+....++||.|.||.||.|.|+.-.-.||||.++.. ....++|.+|+.+|+.++|||+|+++|+|... ..+|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E-----pPFYIi 341 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE-----PPFYII 341 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccC-----CCeEEE
Confidence 456678999999999999999998889999999753 34578999999999999999999999998543 678999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
+|||.+|+|.+|++++.++ .++....+.+|.||+.||+||..+ .+|||||.++|+||.++..||++|||
T Consensus 342 TEfM~yGNLLdYLRecnr~--------ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNRS--------EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred EecccCccHHHHHHHhchh--------hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 9999999999999877655 577778899999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
+++++..+. ........-++.|.|||-+.-..++.|+|||+|||++||+.| |..||.+..- .+ +
T Consensus 411 LsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----Sq---------V 475 (1157)
T KOG4278|consen 411 LSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ---------V 475 (1157)
T ss_pred hhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----HH---------H
Confidence 999886432 223333445788999999999999999999999999999999 9999876311 11 1
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.+++. ...|++.+..|++.++++|+.||+|.|.+||++.|+.+.++.+
T Consensus 476 Y~LLE------------------kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 476 YGLLE------------------KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred HHHHh------------------ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 12221 2234556668999999999999999999999999999999875
No 50
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-38 Score=321.23 Aligned_cols=287 Identities=23% Similarity=0.329 Sum_probs=211.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCC-eeEEEeeecccc-cCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRN-LVKILTACSGVD-YQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~-~~~~ 705 (953)
...|...++||+|+||+||+|+.+.+++.||+|+++.... +......+|+.++++++|+| |+++++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456777889999999999999999999999999975433 45567789999999999999 999999976432 1223
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||++ -+|..++....... ..++...+..++.||+.||+|||++ +|+||||||.||+|+++|.+
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~------~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~l 159 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKP------QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVL 159 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcE
Confidence 47889999995 59999996544321 3566689999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+|+.+... ....+..++|..|+|||++.|. .|+...||||+||++.||++++..|.+..+.+....-+-..
T Consensus 160 KlaDFGlAra~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l 237 (323)
T KOG0594|consen 160 KLADFGLARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL 237 (323)
T ss_pred eeeccchHHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc
Confidence 99999999966422 2234566799999999999887 78999999999999999999999998755533222222111
Q ss_pred hCCch--hhhhccccccCCchhhhhcccchhhh-hh--hhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHH
Q 043900 865 ALPDH--VVDIVDSTLLSDDEDLAVHGNQRQRQ-AR--INSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSI 936 (953)
Q Consensus 865 ~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i 936 (953)
..|.. +..+. ..+++. ...+.+. .+ ........+...+++.+|++.+|++|.|++.+++. +..+
T Consensus 238 GtP~e~~Wp~v~---~~~~~k-----~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 238 GTPNEKDWPGVS---SLPDYK-----APFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccCCCCcc---cccccc-----ccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 22211 11111 000110 0011111 00 00011112467899999999999999999999875 5444
No 51
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.9e-38 Score=350.75 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=204.4
Q ss_pred hcCCcccCcccccceeeEEEEEE-----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGIL-----DQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.++|++.+.||+|+||.||+|++ .+++..||||+++... ....+.+.+|+.+++.+ +||||++++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~--- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV--- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc---
Confidence 34688999999999999999975 3445689999996432 33456788999999999 89999999999643
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcc-------------------------------------------------
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKT------------------------------------------------- 733 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------------------------------------------------- 733 (953)
++..++||||+++|+|.++++........
T Consensus 111 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 111 --GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred --CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 46789999999999999998643211000
Q ss_pred ----------------cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 734 ----------------EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 734 ----------------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
......+++..+++++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 01123588999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccc
Q 043900 798 LSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDS 876 (953)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (953)
............++..|+|||++.+..++.++|||||||++|||++ |..||....... ...+......
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~---------- 334 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGY---------- 334 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCc----------
Confidence 3322222222345678999999999999999999999999999998 888986532211 1111111000
Q ss_pred cccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 877 TLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 877 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
... .+...+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 335 --~~~------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 --RML------------------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --cCC------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000 0001245688999999999999999999999999863
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6e-38 Score=338.32 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=198.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++|++|+++.+++. .++..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-----cCCeE
Confidence 3778899999999999999999888899999986432 223346788999999999999999998853 44689
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~ 144 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMG--------NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRIS 144 (285)
T ss_pred EEEEEecCCCcHHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEe
Confidence 99999999999988875322 22588999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... ..... ......
T Consensus 145 Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~-~~~~~~ 219 (285)
T cd05631 145 DLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEV-DRRVKE 219 (285)
T ss_pred eCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHH-HHHhhc
Confidence 999998754322 1223468999999999999999999999999999999999999997532211 00000 000000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 931 (953)
.. .......+.++.+++.+||+.||++||+ ++|+++
T Consensus 220 ~~---------------------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 220 DQ---------------------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cc---------------------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00 0001123456889999999999999997 788876
No 53
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.2e-38 Score=350.20 Aligned_cols=284 Identities=21% Similarity=0.214 Sum_probs=201.5
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999999988889999998632 223345688999999999999999999987544333335689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++ ++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~-~~L~~~l~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~D 146 (338)
T cd07859 81 VVFELME-SDLHQVIKA----------NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICD 146 (338)
T ss_pred EEEecCC-CCHHHHHHh----------cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEcc
Confidence 9999995 689888842 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCC-cccccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPA-QTSSIDAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~ 224 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLL 224 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHh
Confidence 999986532211 112234568999999999866 67899999999999999999999999753211 1111111111
Q ss_pred CchhhhhccccccCCchhhhhcccch-hhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQR-QRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.....+............. ...... .+..........++++.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 225 GTPSPETISRVRNEKARRY-LSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCCHHHHHHhhhhhHHHH-HHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1000000000000000000 000000 0000000011234568899999999999999999999864
No 54
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=309.53 Aligned_cols=197 Identities=25% Similarity=0.340 Sum_probs=177.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|+..+.+|.|+||.|.+++.+.++..+|+|+++.. .....+...+|..+++.+.||.++++++.| .+...
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCCe
Confidence 4678889999999999999999999999999999643 334456678899999999999999999884 55689
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||++||-|..++++. +++++..++-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||
T Consensus 119 lymvmeyv~GGElFS~Lrk~----------~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKi 185 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKS----------GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKI 185 (355)
T ss_pred EEEEEeccCCccHHHHHHhc----------CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEE
Confidence 99999999999999999743 3689999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+|||+|+.... .....+|||.|+|||++....+..++|-|||||++|||+.|.+||..
T Consensus 186 tDFGFAK~v~~-----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~ 243 (355)
T KOG0616|consen 186 TDFGFAKRVSG-----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD 243 (355)
T ss_pred EeccceEEecC-----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence 99999997642 24456799999999999999999999999999999999999999975
No 55
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.7e-38 Score=342.57 Aligned_cols=283 Identities=22% Similarity=0.288 Sum_probs=199.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
..++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++++. .+..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~ 77 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCe
Confidence 35789999999999999999999998888999999864332 23346778999999999999999999854 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl 144 (303)
T cd07869 78 LTLVFEYVH-TDLCQYMDKH---------PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKL 144 (303)
T ss_pred EEEEEECCC-cCHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEE
Confidence 999999995 6787777432 23578889999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||+++...... .......+++.|+|||++.+ ..++.++||||+||++|||++|..||.+................
T Consensus 145 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 222 (303)
T cd07869 145 ADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG 222 (303)
T ss_pred CCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhC
Confidence 9999997543221 12233458999999998765 45788999999999999999999999764322111111111110
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
......+...............................+..+.+++.+|++.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 223 TPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000000000000000000000000000000112356789999999999999999999985
No 56
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=310.54 Aligned_cols=252 Identities=22% Similarity=0.284 Sum_probs=203.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++.|++.+.||+|+|+.||++....+++.+|+|++. .......+++.+|+.+.+.++||||+++.+. +.....
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccce
Confidence 456888899999999999999999999999999985 2333467889999999999999999999987 455588
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec---CCCc
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD---EEMM 784 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~ 784 (953)
.|+|+|+|.|++|..-+-. ....++..+-..++||+++|.|+|.+ +|||||+||+|+++- ..-.
T Consensus 85 ~ylvFe~m~G~dl~~eIV~----------R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVA----------REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred eEEEEecccchHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCc
Confidence 9999999999999776631 23578889999999999999999999 999999999999994 3347
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||+|..+. ........+|||+|||||++...+|+..+||||.||++|-++.|++||.+.... ..+.+....
T Consensus 152 vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I~~g 227 (355)
T KOG0033|consen 152 VKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQIKAG 227 (355)
T ss_pred eeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHHhcc
Confidence 9999999999886 333445677999999999999999999999999999999999999999862111 111111111
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ++- ..+.....++..+++.+|+..||++|.|+.|.+.
T Consensus 228 ~y-----d~~-----------------------~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 228 AY-----DYP-----------------------SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cc-----CCC-----------------------CcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 00 000 0111244567889999999999999999999864
No 57
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.1e-38 Score=338.74 Aligned_cols=279 Identities=21% Similarity=0.263 Sum_probs=202.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++. .++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-----RRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-----cCCEE
Confidence 36899999999999999999999988899999997432 233567889999999999999999998853 44789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++++.+..+.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~ 142 (287)
T cd07848 76 YLVFEYVEKNMLELLEE----------MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLC 142 (287)
T ss_pred EEEEecCCCCHHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEe
Confidence 99999999887765542 123588999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh--hC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM--AL 866 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~--~~ 866 (953)
|||+++....... .......|++.|+|||++.+..++.++||||+||++|||++|+.||......+. ....... ..
T Consensus 143 Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~ 220 (287)
T cd07848 143 DFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPL 220 (287)
T ss_pred eccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCC
Confidence 9999987643221 122334689999999999998999999999999999999999999975322111 1111110 11
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+.......... .........................+.++.+++.+|++.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 221 PAEQMKLFYSN--PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CHHHHHhhhcc--chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111100000 0000000000000000000111134567999999999999999999999875
No 58
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-37 Score=337.79 Aligned_cols=277 Identities=23% Similarity=0.329 Sum_probs=200.0
Q ss_pred cCCcccCcccccceeeEEEEEEc-CCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhc---CCCCeeEEEeeecccccCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD-QGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNI---RHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~ 704 (953)
++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36899999999999999999985 456789999986432 22234566777777665 6999999999986544445
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||++ ++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~ 148 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP--------EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ 148 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCC
Confidence 567899999996 68988885322 22588999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|++||......+ .+......
T Consensus 149 ~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~ 224 (290)
T cd07862 149 IKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDV 224 (290)
T ss_pred EEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHH
Confidence 999999999876432 22234458999999999988899999999999999999999999997633221 11111111
Q ss_pred h-C--CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 A-L--PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. . +........ .. ..........+ ........+..+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~--~~----~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVA--LP----RQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhc--cc----chhccCCCCCC--HHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1 0 000000000 00 00000000000 00011134567889999999999999999999985
No 59
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-37 Score=335.51 Aligned_cols=265 Identities=25% Similarity=0.431 Sum_probs=207.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCCC-----eEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGK-----TTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
++|++.+.||+|+||.||+|...... ..||+|.++... ......+.+|+..+++++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 46888999999999999999986554 679999986433 334567899999999999999999999854 3
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcc------cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeE
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKT------EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVL 778 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 778 (953)
....+++|||+++++|.+++......... ......+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 46789999999999999999654321110 11124689999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCcc
Q 043900 779 LDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMN 857 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~ 857 (953)
+++++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~-- 234 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE-- 234 (283)
T ss_pred EcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999986543332223334457889999999998899999999999999999998 999987532211
Q ss_pred HHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 858 LHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
....... ... ...+..++.++.+++.+||+.||++||+++||++.|++
T Consensus 235 ~~~~i~~-----------~~~-------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VIEMIRS-----------RQL-------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHc-----------CCc-------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111000 000 00112456789999999999999999999999999975
No 60
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.9e-38 Score=333.73 Aligned_cols=251 Identities=31% Similarity=0.485 Sum_probs=193.7
Q ss_pred ccCcccccceeeEEEEEEc----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 635 SANEIGVGSFGSVYKGILD----QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+.+.||.|+||.||+|++. ..+..|+||+++... ....+.+.+|++.+++++||||++++|+|.. .+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----ccccc
Confidence 4578999999999999998 445689999996533 3347889999999999999999999999862 35689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++|+|.++++... ...+++.+++.|+.||++||+|||+. +++||||+++||+++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~L~~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~ 146 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKN--------KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSD 146 (259)
T ss_dssp EEEE--TTEBHHHHHHHTC--------TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEES
T ss_pred ccccccccccccccccccc--------cccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 9999999999999997541 23689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||++....................|+|||.+.+..++.++||||||+++||+++ |+.||...... .........
T Consensus 147 f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-----~~~~~~~~~ 221 (259)
T PF07714_consen 147 FGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-----EIIEKLKQG 221 (259)
T ss_dssp TTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-----HHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccc
Confidence 999987733333333344557889999999999999999999999999999999 78888653111 111111000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
.. ...+..++..+.+++.+||+.||++|||++|++++|
T Consensus 222 ~~---------------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 222 QR---------------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp EE---------------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cc---------------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00 000112455688999999999999999999999886
No 61
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.7e-37 Score=341.90 Aligned_cols=270 Identities=24% Similarity=0.353 Sum_probs=206.6
Q ss_pred cCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
++|++.+.||+|+||.||+|...+ +++.||+|+++... ....+.+.+|+.++.++ +|+||++++++|..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~---- 82 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK---- 82 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec----
Confidence 479999999999999999997543 23689999987432 33456778899999999 89999999998743
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCc---------------------------------------------------
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDK--------------------------------------------------- 732 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------------------------------------------------- 732 (953)
.+...+++|||+++++|.+++........
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 34678899999999999999854321100
Q ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCccccccccccc
Q 043900 733 TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSI 812 (953)
Q Consensus 733 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~ 812 (953)
.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.............++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 000123689999999999999999999999 99999999999999999999999999998764333222233344677
Q ss_pred ccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccc
Q 043900 813 GYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQ 891 (953)
Q Consensus 813 ~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 891 (953)
.|+|||++.+..++.++|||||||++|||++ |..||......+ ....... ... ..
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~----~~~--------~~----------- 295 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLK----EGT--------RM----------- 295 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHh----ccC--------CC-----------
Confidence 8999999999999999999999999999998 999987532211 1111000 000 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 892 RQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 892 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
..+...++++.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 296 -------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 -------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0001234568899999999999999999999999998754
No 62
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-38 Score=335.97 Aligned_cols=253 Identities=20% Similarity=0.266 Sum_probs=209.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc-
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF- 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~- 707 (953)
+.|..++.+|+|+||.++.++++.+.+.||+|.+... .....+...+|+.++++++|||||.+.+.+ ..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCce
Confidence 5788999999999999999999999999999999643 233455788999999999999999999984 33455
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.+|||+|++||++.+.+.+.+ ...+++..+..|+.|++.|+.|||+. .|+|||||+.||+++.++.|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k--------~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkL 147 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQK--------GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKL 147 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHh--------hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceee
Confidence 999999999999999997544 24689999999999999999999998 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+|+...... ......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|.... ....+...
T Consensus 148 gDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki-- 218 (426)
T KOG0589|consen 148 GDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKI-- 218 (426)
T ss_pred cchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHH--
Confidence 9999999886443 24445779999999999999999999999999999999999999987521 11111111
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
......+ .+.....++..++..|++.+|+.||++.+++.+-
T Consensus 219 ------~~~~~~P-------------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 219 ------NRGLYSP-------------------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred ------hhccCCC-------------------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 1111100 1113456789999999999999999999999873
No 63
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.1e-37 Score=330.72 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=201.1
Q ss_pred cCCcccCcccccceeeEEEEEEc---CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD---QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.+|++.+.||+|+||.||+|.+. .....||+|+++... ......+.+|+..+++++||||+++++++. .++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RGN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cCC
Confidence 46889999999999999999875 345689999987542 334567889999999999999999999864 347
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~---------~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKH---------EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEE
Confidence 899999999999999998532 13588999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
++|||.+....... ........++..|+|||++.+..++.++|||||||++||+++ |..||......+ ......
T Consensus 148 l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~-- 222 (266)
T cd05064 148 ISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAVE-- 222 (266)
T ss_pred ECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHH--
Confidence 99999876532211 111112335678999999999999999999999999999875 999997532211 111000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
+... ...+..++..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 223 ---------~~~~-------------------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 223 ---------DGFR-------------------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---------CCCC-------------------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0000 000113456789999999999999999999999998764
No 64
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.3e-38 Score=339.11 Aligned_cols=246 Identities=22% Similarity=0.276 Sum_probs=198.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 46889999999999999999999888899999996432 23446688999999999999999999874 44578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl 142 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN----------SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKL 142 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEE
Confidence 9999999999999999852 23588899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++..... .....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 143 ~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i-- 210 (291)
T cd05612 143 TDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKI-- 210 (291)
T ss_pred EecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH--
Confidence 999999865321 12345899999999999999999999999999999999999999753211 111100
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVRQ 932 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 932 (953)
..... ..+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 211 ------~~~~~--------------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 211 ------LAGKL--------------------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ------HhCCc--------------------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00000 000012446889999999999999995 7777653
No 65
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-37 Score=340.66 Aligned_cols=200 Identities=26% Similarity=0.361 Sum_probs=174.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|++.+.||+|+||.||+|++..++..||+|+++.. .......+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 46799999999999999999999998889999999754 2334567899999999999999999999864 34678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~ 146 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE----------AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLC 146 (331)
T ss_pred EEEeecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEc
Confidence 999999999999999853 23578999999999999999999985 169999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|||++...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 147 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 99999765322 12234589999999999999999999999999999999999999965
No 66
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=345.51 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=213.9
Q ss_pred CcccCcccccceeeEEEEEEcCC----CeEEEEEEee-ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 633 FASANEIGVGSFGSVYKGILDQG----KTTVAVKVFN-LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.+..++||+|+||+||+|.+--. +-+||+|++. ....+...++..|+-+|.+++|||+++++++|... .
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------T 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------h
Confidence 34568899999999999998433 3469999985 34455678899999999999999999999998643 3
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
..||++||+.|+|.+|++..+. .+.....+.|..|||+||.|||.+ ++|||||.++||||..-..+||
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~---------~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvki 839 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD---------NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKI 839 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc---------cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEE
Confidence 7899999999999999986443 578889999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
.|||+|+....+..........-.+.|||=|.+....|+.++|||||||++||++| |..|+++....+
T Consensus 840 tdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------- 908 (1177)
T KOG1025|consen 840 TDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------- 908 (1177)
T ss_pred EecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-----------
Confidence 99999999877666655555566789999999999999999999999999999999 999998643221
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
+.+.+. .+.|..++.-|+..++.+|.+||..|++.||+++++..++.+..+
T Consensus 909 ---I~dlle------------------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 909 ---IPDLLE------------------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred ---hhHHHh------------------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 111111 112334445678889999999999999999999999999988753
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-37 Score=334.87 Aligned_cols=278 Identities=23% Similarity=0.324 Sum_probs=199.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|.+.+.||+|+||.||+|....+++.||+|+++... ......+.+|+.++++++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-----TERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-----CCCeE
Confidence 357999999999999999999999888899999986432 223456789999999999999999999853 34678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++ +|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~-~l~~~l~~~---------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~ 145 (288)
T cd07871 79 TLVFEYLDS-DLKQYLDNC---------GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLA 145 (288)
T ss_pred EEEEeCCCc-CHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEC
Confidence 999999974 898888532 12478899999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|||+++...... .......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+ ....... ...
T Consensus 146 DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~-~~~ 221 (288)
T cd07871 146 DFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFR-LLG 221 (288)
T ss_pred cCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhC
Confidence 999997653221 12233458999999998865 568999999999999999999999997532211 1111111 111
Q ss_pred chhhhhcccccc-CCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLL-SDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
....+....... ..............+ ..........+..+++.+|+++||.+|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQP--LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCc--hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 110000000000 000000000000000 00001123456789999999999999999999974
No 68
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-37 Score=339.60 Aligned_cols=259 Identities=23% Similarity=0.373 Sum_probs=204.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe----EEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT----TVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|+..+.||+|+||.||+|++..+++ .||+|+++.. .....+++.+|+.+++.++||||++++++|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 468999999999999999999865443 3899998643 33455778899999999999999999999753
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHK---------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhcc---------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcE
Confidence 34679999999999999986322 2578899999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... ........
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK 226 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhC
Confidence 9999999987654332222222335678999999999999999999999999999998 99998652111 11111100
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
. . +......++.++.+++.+||+.+|++||++.+++..+..+.+.
T Consensus 227 ~------------~------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 227 G------------E------------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred C------------C------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 0 0 0000012344688999999999999999999999999888654
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-37 Score=344.50 Aligned_cols=269 Identities=24% Similarity=0.345 Sum_probs=206.6
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhhcC-CCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG-----KTTVAVKVFNLLH-HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 702 (953)
.++|.+.+.||+|+||.||+|++... ...||||+++... ....+.+.+|+++++++. ||||++++++|.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~---- 111 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT---- 111 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc----
Confidence 56788999999999999999997432 2469999996433 334567899999999995 999999999964
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCc--------------------------------------------------
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDK-------------------------------------------------- 732 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------------------------------------------------- 732 (953)
.....++||||+++|+|.++++.......
T Consensus 112 -~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 112 -KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred -cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 34678999999999999999864321000
Q ss_pred ------------------------------------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCC
Q 043900 733 ------------------------------------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSN 776 (953)
Q Consensus 733 ------------------------------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 776 (953)
.......+++.++..++.|+++||+|||+. +|+||||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 000123588999999999999999999999 99999999999
Q ss_pred eEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCC
Q 043900 777 VLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGD 855 (953)
Q Consensus 777 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~ 855 (953)
|+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999999987643332222333446788999999999999999999999999999997 999987532211
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.... ..... . +......++.++.+++.+||+.||++|||+.+|.++|++
T Consensus 348 ~~~~-~~~~~------------~------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 348 TFYN-KIKSG------------Y------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred HHHH-HHhcC------------C------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 1100 00000 0 000111345678999999999999999999999999987
Q ss_pred HH
Q 043900 936 IK 937 (953)
Q Consensus 936 i~ 937 (953)
+.
T Consensus 397 l~ 398 (400)
T cd05105 397 LL 398 (400)
T ss_pred Hc
Confidence 63
No 70
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.2e-38 Score=342.87 Aligned_cols=242 Identities=19% Similarity=0.246 Sum_probs=194.0
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|+...+++.||+|+++.. .......+.+|+.++++++||||+++++++. .++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-----THDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-----cCCEEEEEEe
Confidence 4699999999999999988899999999743 2334456788999999999999999998853 4478999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a 142 (323)
T cd05571 76 YANGGELFFHLSR----------ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCC
Confidence 9999999998852 23588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDI 873 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (953)
+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...........
T Consensus 143 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~---- 211 (323)
T cd05571 143 KEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEE---- 211 (323)
T ss_pred cccccC--CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCC----
Confidence 753211 1122345699999999999999999999999999999999999999964211 11111100000
Q ss_pred ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 874 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 874 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.. .+...++++.+++.+||+.||++|| ++.|+++
T Consensus 212 --~~----------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 212 --IR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred --CC----------------------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00 0012345688999999999999999 7888875
No 71
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=342.46 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=193.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|+..+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++|+||+++++++ ..++..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 34667789999999999999999888899999996433 33456788999999999999999999985 3457889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 149 lv~e~~~~~~L~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~D 211 (353)
T PLN00034 149 VLLEFMDGGSLEGTH--------------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIAD 211 (353)
T ss_pred EEEecCCCCcccccc--------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcc
Confidence 999999999986543 345677889999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+++.+.... .......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+......
T Consensus 212 fG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~ 287 (353)
T PLN00034 212 FGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCA 287 (353)
T ss_pred cccceeccccc--ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHH
Confidence 99998764221 11233468999999998743 23456899999999999999999999732211 11111110
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..... .......++.++.+++.+||+.||++|||+.|+++.
T Consensus 288 ~~~~~---------------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 288 ICMSQ---------------------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HhccC---------------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 000011334578999999999999999999999873
No 72
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.3e-37 Score=330.69 Aligned_cols=269 Identities=25% Similarity=0.401 Sum_probs=209.9
Q ss_pred cCCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
++|.+.+.||+|+||.||+|... .++..||+|.++.........+.+|++++++++||||++++++|. ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 46888999999999999999862 344579999987666566678999999999999999999999964 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCc---ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDK---TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
+..++||||+++++|.+++........ .......+++.+++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 778999999999999999864332111 111234589999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+ .
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-----~ 231 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----V 231 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----H
Confidence 9999999999986543322222233446788999999998999999999999999999999 899986432111 0
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
........ ... ....++.++.+++.+||+.||.+|||+.|+.+.|+++.+.
T Consensus 232 ~~~i~~~~--------~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 IECITQGR--------VLQ-------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHcCC--------cCC-------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00000000 000 0002345689999999999999999999999999999865
No 73
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.3e-37 Score=330.68 Aligned_cols=266 Identities=22% Similarity=0.385 Sum_probs=203.6
Q ss_pred hhcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
..++|++.+.||+|+||.||+|.+.. .++.||+|+++... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 45679999999999999999998753 34579999986432 234567889999999999999999999864
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.+...++||||+++|+|.++++..............+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 34678999999999999999865332211111233578899999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-----~~ 230 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-----QV 230 (277)
T ss_pred CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-----HH
Confidence 9999999999976543322222222345788999999999999999999999999999999 78888643211 11
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
........ ... ....++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 231 ~~~~~~~~--------~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVMEGG--------LLD-------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCC--------cCC-------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11000000 000 00123456899999999999999999999999886
No 74
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.1e-37 Score=328.99 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=202.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT----TVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
++|++.+.||+|+||.||+|.+..+++ .|++|.+.... .....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 468889999999999999999876554 47777775332 2344677888889999999999999998632
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++++||+++|+|.+++... ...+++..+..++.||+.||+|||+. +++||||||+||++++++.+
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~ 148 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQH---------RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIV 148 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcE
Confidence 3467999999999999999632 23589999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||.++...............++..|+|||++.+..++.++|||||||++||+++ |..||.+.... ...+....
T Consensus 149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (279)
T cd05111 149 QIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEK 226 (279)
T ss_pred EEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC
Confidence 9999999987644333223334457789999999998899999999999999999998 99998753211 11111110
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
. .... ....++..+.+++.+||..||++|||+.|+++.|..+.+.
T Consensus 227 ~------------~~~~------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 227 G------------ERLA------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred C------------CcCC------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0 0000 0001234578899999999999999999999999887653
No 75
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=336.72 Aligned_cols=244 Identities=23% Similarity=0.296 Sum_probs=202.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 704 (953)
..++|...++||+|+||.|++|..+.+++.+|||++++. ..++.+..+.|.+++... +||.++.++.+ |+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 446799999999999999999999999999999999743 345677888898888877 59999999988 677
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
.++.|.||||+.||++..+.+ ...+++..+.-+|..|+.||+|||++ |||+||||.+|||+|.+|.
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~-----------~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIH-----------TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEe-----------cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCc
Confidence 799999999999999655553 34699999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||+++.--. ........+||+.|||||++.+..|+.++|.|||||+||||+.|..||.+..++
T Consensus 507 ~kiADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------- 574 (694)
T KOG0694|consen 507 VKIADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------- 574 (694)
T ss_pred EEecccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----------
Confidence 99999999985421 223455678999999999999999999999999999999999999999863222
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
++.|..+..+. ..+..++.+...++++++..+|++|-.+
T Consensus 575 -------e~FdsI~~d~~----------------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 -------EVFDSIVNDEV----------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHHHhcCCC----------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11111111111 0112456678899999999999999866
No 76
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-37 Score=342.63 Aligned_cols=254 Identities=19% Similarity=0.256 Sum_probs=202.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++..++||||+++++++. .++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 36899999999999999999999888899999997432 234567889999999999999999999854 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL 142 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNN----------LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKL 142 (333)
T ss_pred EEEEEeCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEE
Confidence 9999999999999999952 23578999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||......+ ....... ..
T Consensus 143 ~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~--~~ 214 (333)
T cd05600 143 TDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENLKY--WK 214 (333)
T ss_pred EeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHHHh--cc
Confidence 99999986532 2234568999999999999999999999999999999999999997532111 0000000 00
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..... +... ......++++.+++.+||+.+|++||+++|+++.
T Consensus 215 ----~~~~~---~~~~---------------~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 215 ----ETLQR---PVYD---------------DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----ccccC---CCCC---------------ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000 0000 0001345678899999999999999999999864
No 77
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-38 Score=298.18 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=208.0
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+.++|.+++.||+|.||.||.|+.+.+.-.||+|++... ..+...++.+|+++-..++||||++++++ +.+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 456799999999999999999999999989999998532 22345788999999999999999999999 4556
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...|+++||.++|.+...++.... ..+++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~--------~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~l 163 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRM--------KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGEL 163 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhccc--------ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCe
Confidence 899999999999999999974332 3578888899999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
||+|||.+..-+ .......+||..|.|||+..+..++...|+|++|+..||++.|.+||.... .+..+.+.....
T Consensus 164 kiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~ 238 (281)
T KOG0580|consen 164 KIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD 238 (281)
T ss_pred eccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc
Confidence 999999998643 233345679999999999999999999999999999999999999998643 111222211111
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
+ ..+...+.+..+++.+|+..+|.+|.+..|+++.
T Consensus 239 ~--------------------------------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 L--------------------------------KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred c--------------------------------cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1 0112345568899999999999999999999864
No 78
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-37 Score=355.66 Aligned_cols=254 Identities=18% Similarity=0.196 Sum_probs=203.2
Q ss_pred CCcccCcccccceeeEEEEEEcCC-CeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQG-KTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+.+++.++||||++++++|. .++..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 488999999999999999998776 6789999876555555667888999999999999999999964 3478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++|+|.++++.... ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 143 v~E~~~gg~L~~~l~~~~~------~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLK------EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred EEECCCCCCHHHHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeC
Confidence 9999999999998853221 123588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 214 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~- 287 (478)
T PTZ00267 214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGK- 287 (478)
T ss_pred cCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC-
Confidence 999876543322233345699999999999999999999999999999999999999964211 11111100000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... .+..++.++.+++.+||+.||++||++++++.
T Consensus 288 -------~~~-------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 288 -------YDP-------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -------CCC-------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000 00123456889999999999999999999875
No 79
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6e-37 Score=326.84 Aligned_cols=256 Identities=26% Similarity=0.429 Sum_probs=203.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|.+.+.||+|+||.||+|.+...++.||+|+++... .....+.+|++++++++||||++++++|.. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcC-----CCCcEE
Confidence 35788899999999999999999888899999987433 345678899999999999999999998643 367899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.... ...+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+||
T Consensus 80 v~e~~~~~~L~~~~~~~~--------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 80 ITEFMTYGNLLDYLRECN--------RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred EEEeCCCCcHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCC
Confidence 999999999999985432 23588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.+........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .......
T Consensus 149 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~---- 218 (263)
T cd05052 149 GLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELL---- 218 (263)
T ss_pred cccccccccee-eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHH----
Confidence 99986643211 11112234668999999999999999999999999999998 9999864211 1111110
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
...... ..+..++.++.+++.+||+.||++|||+.|+++.|+.+
T Consensus 219 -----~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 219 -----EKGYRM------------------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----HCCCCC------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000000 00112356789999999999999999999999999875
No 80
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.2e-37 Score=353.81 Aligned_cols=265 Identities=21% Similarity=0.247 Sum_probs=207.6
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC-
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ- 703 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 703 (953)
....++|.+.+.||+|+||+||+|++..+++.||||+++.. .......+.+|+..+..++|++++++.+.+......
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999999988889999998643 344456788999999999999999998775432111
Q ss_pred --CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC
Q 043900 704 --GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE 781 (953)
Q Consensus 704 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 781 (953)
.....++||||+++|+|.++++.... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~------~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~ 178 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAK------TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCS 178 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhc------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeC
Confidence 11246899999999999999864322 134689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 782 EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 782 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....
T Consensus 179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~ 253 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEV 253 (496)
T ss_pred CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHH
Confidence 99999999999987643322223334569999999999999999999999999999999999999996421 1111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
........ ... .+..+++++.+++.+||+.||++||++.++++.
T Consensus 254 ~~~~~~~~--------~~~-------------------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 254 MHKTLAGR--------YDP-------------------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHhcCC--------CCC-------------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111000 000 001235678899999999999999999999863
No 81
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=315.26 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=209.0
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
|.+++++|+|+||+||+|.++.++..||+|.+.... +.+++.+|+.+|++++.|++|++||.+ -.+...||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSY-----FK~sDLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSY-----FKHSDLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhh-----ccCCceEeeh
Confidence 667889999999999999999999999999987543 467889999999999999999999984 3457899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
|||..|+..+.++. ..+.+++.++..+.+..++||+|||.. .-+|||||+.|||++.+|.+||+|||.
T Consensus 108 EYCGAGSiSDI~R~---------R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 108 EYCGAGSISDIMRA---------RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred hhcCCCcHHHHHHH---------hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccc
Confidence 99999999999963 345799999999999999999999999 899999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
|..+. +.......+.||+.|||||++..-.|+.++||||+|++..||..|++||.+....... -
T Consensus 176 AGQLT--DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI--------------F 239 (502)
T KOG0574|consen 176 AGQLT--DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI--------------F 239 (502)
T ss_pred cchhh--hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee--------------E
Confidence 97653 2333445577999999999999999999999999999999999999999763222110 0
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
++ ...++.-+..++..+.++.++++.|+-+.|++|-||.++++.
T Consensus 240 MI----------------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 240 MI----------------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ec----------------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 00 011222333455667889999999999999999999998873
No 82
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.5e-37 Score=327.10 Aligned_cols=262 Identities=20% Similarity=0.319 Sum_probs=207.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|+...+++.||+|.++. ........+.+|+++++.++||||+++++++. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 578999999999999999999998888999998753 22344567889999999999999999999854 3467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++..... ....+++..++.++.|+++||+|||+. +++||||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l 147 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKK------QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhh------ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEE
Confidence 8999999999999988853221 123578899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||.+....... .......+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...+......
T Consensus 148 ~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~~~ 222 (267)
T cd08228 148 GDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKIEQ 222 (267)
T ss_pred Cccccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHHhc
Confidence 9999998764322 1122345888999999998888999999999999999999999998642211 1111111000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
.. ..+ ......+..+.+++.+||+.+|++||++.||++.++.++
T Consensus 223 ~~--------~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 223 CD--------YPP------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CC--------CCC------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 00 000 001133466899999999999999999999999998864
No 83
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=341.48 Aligned_cols=246 Identities=21% Similarity=0.237 Sum_probs=198.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++. .++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCC
Confidence 357899999999999999999999988899999996432 234467889999999999999999999854 447
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 158 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRK----------AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVK 158 (329)
T ss_pred EEEEEEcCCCCChHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEE
Confidence 89999999999999999853 23578889999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ........
T Consensus 159 l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i~ 228 (329)
T PTZ00263 159 VTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYEKIL 228 (329)
T ss_pred EeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHHHHh
Confidence 99999998764321 234689999999999999999999999999999999999999964211 11111100
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 931 (953)
.. ... .+...+.++.+++.+||+.||.+||+ +++++.
T Consensus 229 ~~--------~~~--------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 229 AG--------RLK--------------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred cC--------CcC--------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 000 00012345789999999999999997 577664
No 84
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.3e-37 Score=330.40 Aligned_cols=271 Identities=24% Similarity=0.404 Sum_probs=210.7
Q ss_pred cCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|.+.+.||+|+||.||+|.+.. +...|++|.++.......+.+.+|++++++++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence 357888999999999999998643 34569999987666555678899999999999999999999964 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCC------cccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITRED------KTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
+..++||||+++++|.+++....... ........+++..++.++.|++.|++|||++ +++||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 67899999999999999996543210 0011223589999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccH
Q 043900 780 DEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNL 858 (953)
Q Consensus 780 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~ 858 (953)
+.++.++|+|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||....... .
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 234 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--V 234 (291)
T ss_pred ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence 9999999999999976543322222333456789999999999999999999999999999999 999986422111 1
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
..... ... .. .....++..+.+++.+||+.||++|||+++|+++|+++.+
T Consensus 235 ~~~~~---~~~--------~~-------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 235 IECIT---QGR--------VL-------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHh---CCC--------CC-------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 00000 000 00 0001234568899999999999999999999999999977
Q ss_pred Hhc
Q 043900 939 ILL 941 (953)
Q Consensus 939 ~~~ 941 (953)
..+
T Consensus 285 ~~~ 287 (291)
T cd05094 285 ATP 287 (291)
T ss_pred hcC
Confidence 543
No 85
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.8e-36 Score=325.47 Aligned_cols=265 Identities=26% Similarity=0.408 Sum_probs=204.0
Q ss_pred CcccCcccccceeeEEEEEEcCC---CeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc-CCCC
Q 043900 633 FASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGND 706 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 706 (953)
|.+.+.||+|+||.||+|....+ ...||+|+++.. .......+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999998653 367999998743 23345678999999999999999999998754322 2234
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|..++...... .....+++..++.++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG----GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc----CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEE
Confidence 579999999999999998543221 1233689999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... .......
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~-- 229 (273)
T cd05035 154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLR-- 229 (273)
T ss_pred ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH--
Confidence 999999987644332222222335678999999988899999999999999999999 88888642211 1111100
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
+.... ..+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 230 ---------~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 ---------HGNRL-------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------cCCCC-------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00000 00112345789999999999999999999999999875
No 86
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1e-36 Score=327.09 Aligned_cols=265 Identities=24% Similarity=0.418 Sum_probs=202.3
Q ss_pred CcccCcccccceeeEEEEEEcCCCe--EEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc-CCCCc
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKT--TVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QGNDF 707 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 707 (953)
|.+.+.||+|+||.||+|++...+. .||+|.++.. .....+.+.+|+++++.++||||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999877654 5899988643 34456788999999999999999999998754311 12245
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 153 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLG----DCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCV 153 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhccc----CCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEE
Confidence 78999999999999987432211 1234589999999999999999999998 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||+++.+.............+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .......
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~--- 228 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLR--- 228 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH---
Confidence 99999987643322111222346778999999999999999999999999999999 88888642111 1111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.... . .....++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ~~~~--------~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QGNR--------L-------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cCCC--------C-------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 0 00012345688999999999999999999999999874
No 87
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.3e-37 Score=329.70 Aligned_cols=264 Identities=27% Similarity=0.436 Sum_probs=205.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCC-----CeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQG-----KTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
++|.+.+.||+|+||.||+|+..+. ++.||+|+++..... ..+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----- 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----- 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-----
Confidence 4688889999999999999987543 468999999754433 45789999999999999999999999643
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCc----ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDK----TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
....++||||+++++|.+++........ .......+++.++..++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~ 156 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVG 156 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEc
Confidence 3779999999999999999975432110 012234689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHH
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~ 859 (953)
.++.+||+|||.++...............+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ..
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~ 234 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VI 234 (280)
T ss_pred CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH
Confidence 999999999999986533322222233346788999999999999999999999999999999 999986432111 11
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
..... ..... ....++.++.+++.+||+.||++||++.||++.|+
T Consensus 235 ~~~~~-----------~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECITQ-----------GRLLQ-------------------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHc-----------CCcCC-------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11000 00000 00123456899999999999999999999999886
No 88
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.7e-37 Score=337.84 Aligned_cols=242 Identities=20% Similarity=0.261 Sum_probs=193.0
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|....+++.||+|+++.. .......+.+|+++++.++||||+++++++. .++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCEEEEEEe
Confidence 4699999999999999988889999999743 2334456778999999999999999998853 4478999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|..++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 142 (323)
T cd05595 76 YANGGELFFHLSR----------ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLC 142 (323)
T ss_pred CCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHh
Confidence 9999999988852 23588999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDI 873 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (953)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 143 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~--- 212 (323)
T cd05595 143 KEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELILMEEI--- 212 (323)
T ss_pred ccccCC--CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCC---
Confidence 753221 11222346899999999999999999999999999999999999999642111 11110000000
Q ss_pred ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 874 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 874 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.. +...++++.+++.+||+.||++|| ++.++++
T Consensus 213 ---~~----------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 ---RF----------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ---CC----------------------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00 012345688999999999999998 7888875
No 89
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-36 Score=335.62 Aligned_cols=200 Identities=26% Similarity=0.367 Sum_probs=173.4
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|++.++||+|+||.||+|.+..++..||+|+++.. .......+.+|++++++++||||++++++|.. ++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEE
Confidence 46899999999999999999999988889999998753 33345678999999999999999999999643 4789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~ 146 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK----------AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLC 146 (333)
T ss_pred EEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEe
Confidence 999999999999999852 23578889999999999999999974 179999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|||++...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 147 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred eCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999765322 11234589999999999998999999999999999999999999975
No 90
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.9e-37 Score=337.34 Aligned_cols=240 Identities=23% Similarity=0.288 Sum_probs=191.3
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++. ..+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 79999999999999988889999999642 2334567788999999999999999998853 447899999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~ 142 (312)
T cd05585 76 NGGELFHHLQR----------EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKL 142 (312)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECccccc
Confidence 99999999853 23588999999999999999999999 999999999999999999999999999975
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 143 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~------ 209 (312)
T cd05585 143 NMKD--DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEP------ 209 (312)
T ss_pred CccC--CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCC------
Confidence 4221 122234568999999999999999999999999999999999999997421 111111111000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC---HHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN---MTNVVR 931 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~ 931 (953)
. ..+...++++.+++.+||+.||++||+ +.|++.
T Consensus 210 --~--------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 210 --L--------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred --C--------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 0 000123456889999999999999986 455543
No 91
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1e-36 Score=325.75 Aligned_cols=258 Identities=23% Similarity=0.377 Sum_probs=204.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC---CeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.++|++.+.||+|+||.||+|.+... ...||+|+++... ......+.+|+.++++++||||+++++++. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cC
Confidence 35689999999999999999998643 4579999987433 334567889999999999999999999853 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..++||||+++++|.+++.... ..+++.++++++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~ 145 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND---------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVC 145 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCE
Confidence 67899999999999999986322 2588999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|||+++...............++..|+|||.+.+..++.++||||||+++||+++ |..||...... ........
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~ 223 (266)
T cd05033 146 KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVED 223 (266)
T ss_pred EECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987752222222223345678999999999999999999999999999998 99998643211 01111100
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.. .. +....++..+.+++.+||+.+|++||++.||++.|+++
T Consensus 224 ~~-----------~~-------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GY-----------RL-------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CC-----------CC-------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 00 00012345688999999999999999999999999875
No 92
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=336.42 Aligned_cols=201 Identities=29% Similarity=0.343 Sum_probs=173.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC-C-----CCeeEEEeeecccccCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR-H-----RNLVKILTACSGVDYQG 704 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~ 704 (953)
.+|.+.+.||+|+||.|.+|.+..+++.||||+++.... ...+...|+.+|..++ | -|+|+++++| ..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cc
Confidence 378999999999999999999999999999999985443 4566778999999996 3 4899999995 44
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM- 783 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 783 (953)
..+.|||+|.+ ..+|.++++.+... .++...++.|+.||+.||.+||+. +|||+||||+|||+.+-+
T Consensus 260 r~HlciVfELL-~~NLYellK~n~f~--------Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 260 RNHLCIVFELL-STNLYELLKNNKFR--------GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKR 327 (586)
T ss_pred ccceeeeehhh-hhhHHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCc
Confidence 58999999999 56999999866543 699999999999999999999999 999999999999996433
Q ss_pred -cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 784 -MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 784 -~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
.+||+|||.|++..... .....+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+..+.
T Consensus 328 ~~vKVIDFGSSc~~~q~v-----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 328 SRIKVIDFGSSCFESQRV-----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred CceeEEecccccccCCcc-----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 79999999999753221 2456889999999999999999999999999999999998888764443
No 93
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-37 Score=315.34 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=204.4
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
..+|++.+.+|+|.||.|-+|.....++.||||.++.. +..+.-.+.+|+++|..++||||+.++.+ |++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 45788899999999999999999888899999999643 34445567899999999999999999998 56678
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
...|||||..+|.|++|+.. .+.+++.+...+++||+.|+.|+|.+ +++|||||.+|||+|.++++|
T Consensus 127 KIvivMEYaS~GeLYDYiSe----------r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISE----------RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred eEEEEEEecCCccHHHHHHH----------hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCee
Confidence 99999999999999999963 34799999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||++-.+.. .......+|++-|.+||+..|.+|. +..|.||+||++|.++.|..||++. +....++..
T Consensus 194 IADFGLSNly~~---~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQI 265 (668)
T KOG0611|consen 194 IADFGLSNLYAD---KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQI 265 (668)
T ss_pred eeccchhhhhcc---ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHh
Confidence 999999987743 3344567899999999999999885 8899999999999999999999863 111222211
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
......+ .+.+....-++++|+..+|++|.|..+|...
T Consensus 266 s~GaYrE-----------------------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 266 SRGAYRE-----------------------------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred hcccccC-----------------------------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1111100 0112234568899999999999999998754
No 94
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.7e-37 Score=357.79 Aligned_cols=272 Identities=21% Similarity=0.297 Sum_probs=208.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.++||+|+||.||+|++..+++.||+|+++.. .....+++.+|++++++++||||+++++++. +++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 5799999999999999999999988889999998642 2233567899999999999999999999864 3477
Q ss_pred eeEEEeeccCCchhhccccCCcCC-cccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITRED-KTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
.++||||+++|+|.+++....... .........++..+++++.||++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 899999999999999986432111 1112234577888999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCC----------------cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 787 VSDFGLARFLPLSPA----------------QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 787 L~DfG~a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999987621110 0111234699999999999999999999999999999999999999965
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-CHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-NMTNV 929 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev 929 (953)
........ ..... + .. ......+.++.+.+++.+|++.||++|| +++++
T Consensus 234 ~~~~ki~~----~~~i~-------~------P~-------------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 234 KKGRKISY----RDVIL-------S------PI-------------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred cchhhhhh----hhhcc-------C------hh-------------hccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 21111000 00000 0 00 0000113456788999999999999995 67788
Q ss_pred HHHHHHHHHHh
Q 043900 930 VRQLQSIKNIL 940 (953)
Q Consensus 930 l~~L~~i~~~~ 940 (953)
.+.|+...+..
T Consensus 284 l~~Le~~lq~~ 294 (932)
T PRK13184 284 KQDLEPHLQGS 294 (932)
T ss_pred HHHHHHHHhcC
Confidence 88888876543
No 95
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=365.97 Aligned_cols=482 Identities=29% Similarity=0.358 Sum_probs=367.3
Q ss_pred EEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCcc
Q 043900 8 ILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNE 87 (953)
Q Consensus 8 ~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 87 (953)
.+|.+.+++. -||..+..-..++.|++++|.+...+-+...+..+|+.|||++|++. ..|..+..+..|+.|+++.|.
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 3678888886 88888888778999999999998743344456667999999999998 999999999999999999999
Q ss_pred ccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCc
Q 043900 88 LVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSS 167 (953)
Q Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 167 (953)
|. ..|.+..++.+|++|.|.+|.+. ..|.+++.+.+|++|+++.|++. .+|..+..+..+..+..++|.....++..
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~ 156 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQT 156 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccc
Confidence 99 88999999999999999999998 89999999999999999999998 89999999999999999999322233332
Q ss_pred ccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccc
Q 043900 168 IFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLS 247 (953)
Q Consensus 168 l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~ 247 (953)
.++.+++..|.+.+.++.+.. .+.. .|+|++|.+. .-.+.++.+|+.|.++.|++....- ..++++
T Consensus 157 -----~ik~~~l~~n~l~~~~~~~i~-~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~---~g~~l~ 222 (1081)
T KOG0618|consen 157 -----SIKKLDLRLNVLGGSFLIDIY-NLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI---SGPSLT 222 (1081)
T ss_pred -----cchhhhhhhhhcccchhcchh-hhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe---cCcchh
Confidence 288999999999988888765 3444 5999999987 3357788899999999999875421 235677
Q ss_pred eeeecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCE
Q 043900 248 VFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQR 327 (953)
Q Consensus 248 ~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 327 (953)
.++.+.|.+.. +....-..++++++++.|++++ +|+++..+ .+|+.+...+|+++ .+|..+...++|+.
T Consensus 223 ~L~a~~n~l~~--------~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~-~nle~l~~n~N~l~-~lp~ri~~~~~L~~ 291 (1081)
T KOG0618|consen 223 ALYADHNPLTT--------LDVHPVPLNLQYLDISHNNLSN-LPEWIGAC-ANLEALNANHNRLV-ALPLRISRITSLVS 291 (1081)
T ss_pred eeeeccCccee--------eccccccccceeeecchhhhhc-chHHHHhc-ccceEecccchhHH-hhHHHHhhhhhHHH
Confidence 77777777652 2223345678888999998886 45888887 58999999999996 67888888888999
Q ss_pred EEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCC-CCc--eeeEEEccCCcCCCCCCc-cCCCCCCCcEEEcCC
Q 043900 328 LEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSI-GNL--KVFNLDLSCNFLQGSIPS-SLGQYKTLTIIDLSD 403 (953)
Q Consensus 328 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l--~l~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~ 403 (953)
|.+.+|.+. -+|....+++.|++|+|..|+|. ..|..+ .-+ .+..|+.+.|.+.. .|. .=..++.|+.|++.+
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~-lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLST-LPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccc-cccccchhhHHHHHHHHhc
Confidence 999999998 67888888899999999999987 455433 222 34556666676663 331 112345677777888
Q ss_pred CccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccCCC
Q 043900 404 NNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPI 483 (953)
Q Consensus 404 N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 483 (953)
|.++...-+-+- ....|+.|+|++|++.......+.++..|++|+||+|+++ .+|.++.++..|++|...+|+|. ..
T Consensus 369 N~Ltd~c~p~l~-~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~f 445 (1081)
T KOG0618|consen 369 NHLTDSCFPVLV-NFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SF 445 (1081)
T ss_pred Ccccccchhhhc-cccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ec
Confidence 877743332222 2334567788888777444455677777888888888887 67777777888888888888877 56
Q ss_pred CccccCCCCCcEEECCCCcccccCCccccccccCceEeccCCc
Q 043900 484 PSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNNN 526 (953)
Q Consensus 484 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~ 526 (953)
| .+..+++|+++|+|.|+|+...-......++|++|||++|.
T Consensus 446 P-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 446 P-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred h-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 6 67777888888888887774322222223677888888876
No 96
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.6e-37 Score=327.51 Aligned_cols=257 Identities=26% Similarity=0.454 Sum_probs=206.9
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
...+|++.+.||+|+||.||+|.+.+ ++.||+|+++.........+.+|+.+++.++||||+++++++. .....
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCe
Confidence 34578999999999999999999988 5689999998666555678899999999999999999999864 34678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++++|.++++... ...+++.+++.++.|++.|++|||+. +++||||||+||++++++.+||+
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~ 146 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE--------GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVA 146 (261)
T ss_pred EEEEeecccCCHHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEc
Confidence 99999999999999996432 23589999999999999999999998 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|||.+........ ......++..|+|||+..+..++.++||||||+++|+|++ |+.||......+ .......
T Consensus 147 d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~--- 219 (261)
T cd05148 147 DFGLARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--VYDQITA--- 219 (261)
T ss_pred cccchhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHHHh---
Confidence 9999986643211 1123346778999999988899999999999999999998 899986532110 0000000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
... ......+++++.+++.+||+.||++|||++++++.|+.+
T Consensus 220 ---------~~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 220 ---------GYR------------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---------CCc------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000 000113456788999999999999999999999999863
No 97
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-36 Score=328.77 Aligned_cols=271 Identities=25% Similarity=0.349 Sum_probs=203.1
Q ss_pred CC-cccCcccccceeeEEEEEE----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GF-ASANEIGVGSFGSVYKGIL----DQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~-~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+| .+.+.||+|+||+||++.. ..+++.||+|+++... ......+.+|++++++++||||++++++|.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGG 80 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCC
Confidence 44 8889999999999988764 3456689999997543 2345678899999999999999999998743 233
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~-----------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 146 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK-----------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLV 146 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcE
Confidence 568999999999999999842 2489999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||+||..||................
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 999999998764322211 1122235677999999998899999999999999999999999986432111000000000
Q ss_pred hC-CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 865 AL-PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 865 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
.. .....+..+... ....+..++.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERGM------------------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcCC------------------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 000111111000 00011234567999999999999999999999999999875
No 98
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.7e-36 Score=328.32 Aligned_cols=267 Identities=24% Similarity=0.398 Sum_probs=204.9
Q ss_pred CCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+|++.+.||+|+||.||+|+... +...||+|.+.... ......+.+|+.+++.++||||+++++.|. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47788999999999999999753 23568999886433 334567889999999999999999999864 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCc--------------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDK--------------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCD 771 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 771 (953)
+..++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 678999999999999999864322110 011234689999999999999999999998 999999
Q ss_pred CCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCC
Q 043900 772 LKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDS 850 (953)
Q Consensus 772 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~ 850 (953)
|||+||++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986543322222223346778999999988899999999999999999999 9999864
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
.... ... +........ .....++.++.+++.+||+.+|++||+++|++
T Consensus 233 ~~~~--~~~------------~~~~~~~~~------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~ 280 (290)
T cd05045 233 IAPE--RLF------------NLLKTGYRM------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADIS 280 (290)
T ss_pred CCHH--HHH------------HHHhCCCCC------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 2211 111 111110000 00012345688999999999999999999999
Q ss_pred HHHHHHHH
Q 043900 931 RQLQSIKN 938 (953)
Q Consensus 931 ~~L~~i~~ 938 (953)
+.|+++..
T Consensus 281 ~~l~~~~~ 288 (290)
T cd05045 281 KELEKMMV 288 (290)
T ss_pred HHHHHHHh
Confidence 99998754
No 99
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-36 Score=329.12 Aligned_cols=270 Identities=25% Similarity=0.378 Sum_probs=204.6
Q ss_pred cCCcccCcccccceeeEEEEEE----cCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGIL----DQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.+|++.+.||+|+||.||+|.. ..+++.||+|+++.......+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 4688899999999999999985 34567899999986666667788999999999999999999998643 2335
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~---------~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~ 148 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH---------RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVK 148 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc---------CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEE
Confidence 689999999999999998532 12488999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCccc-ccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTS-SIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++|..|+...... ........
T Consensus 149 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~ 225 (284)
T cd05081 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGND 225 (284)
T ss_pred ECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccc
Confidence 999999987643322111 11122455699999999889999999999999999999988775432110 00000000
Q ss_pred CC--c---hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 866 LP--D---HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 866 ~~--~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.. . ...+.+... .+......++.++.+++.+||+.+|++||||.||++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 226 KQGQMIVYHLIELLKNN------------------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccccchHHHHHHHhcC------------------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00 0 000000000 00011123456799999999999999999999999999876
No 100
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.9e-37 Score=337.48 Aligned_cols=243 Identities=21% Similarity=0.287 Sum_probs=194.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 4699999999999999988899999999743 233456788899999999999999999885 34578999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 76 y~~~g~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~ 142 (328)
T cd05593 76 YVNGGELFFHLSR----------ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLC 142 (328)
T ss_pred CCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCC
Confidence 9999999988852 23588999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDI 873 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (953)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 143 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~---- 211 (328)
T cd05593 143 KEGITD--AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMED---- 211 (328)
T ss_pred ccCCCc--ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCC----
Confidence 753221 1122335689999999999999999999999999999999999999964211 11111110000
Q ss_pred ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 043900 874 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVRQ 932 (953)
Q Consensus 874 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 932 (953)
..+ +...+.++.+++.+||+.||++|| ++.|+++.
T Consensus 212 --~~~----------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 --IKF----------------------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --ccC----------------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 000 012345688999999999999997 88998763
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.5e-37 Score=341.81 Aligned_cols=270 Identities=20% Similarity=0.238 Sum_probs=198.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++++. .+...++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEE
Confidence 57999999999999999999999999999999753 235678999999999999999999853 3467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
|||++. ++|..++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 161 v~e~~~-~~L~~~l~~----------~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 161 ILPRYK-TDLYCYLAA----------KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred EEecCC-CCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeC
Confidence 999995 688888742 23578999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCC------ccHHHHHHh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGD------MNLHNFARM 864 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~------~~~~~~~~~ 864 (953)
|+|+..... .........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ..+......
T Consensus 227 G~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 227 GAACFPVDI-NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred Ccccccccc-cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 999754221 1122234569999999999999999999999999999999999998875422111 111111111
Q ss_pred hC--Cch----hhhhccccccCCchhhhhcccchhhh--hhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 AL--PDH----VVDIVDSTLLSDDEDLAVHGNQRQRQ--ARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~--~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. +.. .....+... .... ......+. ..+......+.++.+++.+||+.||++|||++|+++
T Consensus 306 ~g~~p~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 306 SGTHPNEFPIDAQANLDEIY----IGLA-KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhcCcchhHHHHHHH----HHHH-hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 10 000 000000000 0000 00000000 111222345678999999999999999999999985
No 102
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-36 Score=323.56 Aligned_cols=255 Identities=26% Similarity=0.421 Sum_probs=201.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.++||+|+||.||+|...++ ..||+|.+.... ...+.+.+|+.++++++|+||+++++++. .....+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNS-TKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCC-ceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCcE
Confidence 35789999999999999999998665 479999886433 23568899999999999999999998853 346789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.++++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 146 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDE--------GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIAD 146 (261)
T ss_pred EEEecCCCCcHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECC
Confidence 9999999999999986432 23578889999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.++........ ......++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ..........
T Consensus 147 fg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~- 222 (261)
T cd05072 147 FGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRGYR- 222 (261)
T ss_pred CccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcCCC-
Confidence 9999876432211 1222346778999999988899999999999999999998 999986422111 1111100000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.+....++.++.+++.+||..+|++||+++++.+.|++
T Consensus 223 -----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 -----------------------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -----------------------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00001234568899999999999999999999999986
No 103
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=339.00 Aligned_cols=247 Identities=21% Similarity=0.267 Sum_probs=197.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCC-eEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGK-TTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.++|.+.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+++++.++||||+++++++. +.
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----DE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----eC
Confidence 456999999999999999999976554 68999998632 2334567889999999999999999999964 44
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~i 170 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRR----------NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFI 170 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCE
Confidence 789999999999999999852 23588999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 171 kL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~- 239 (340)
T PTZ00426 171 KMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQK- 239 (340)
T ss_pred EEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHHH-
Confidence 99999999875321 12346899999999999989999999999999999999999999752111 00000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 932 (953)
+...... .+...+..+.+++.+|++.||++|+ +++|+++.
T Consensus 240 -------i~~~~~~--------------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 240 -------ILEGIIY--------------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -------HhcCCCC--------------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0000000 0001234577999999999999995 88888763
No 104
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-36 Score=325.52 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=204.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCe----EEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKT----TVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
.++|++.+.||+|+||+||+|++..+++ .||+|+++.. .......+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 3568889999999999999999865554 4899998643 33445678899999999999999999998742
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
...+++|||+++|+|.++++.. ...+++.+++.++.|++.||+|||+. +++||||||+||++++++.
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~---------~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~ 147 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVREN---------KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNH 147 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCc
Confidence 3467999999999999998632 23588999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
+||+|||+++...............++..|+|||...+..++.++|||||||++|||++ |..||...... ....+..
T Consensus 148 ~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~ 225 (279)
T cd05109 148 VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLE 225 (279)
T ss_pred EEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987754333222223345678999999999999999999999999999998 89998642211 1111111
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
.... ......++.++.+++.+||+.||++||++.|+++.|+.+...
T Consensus 226 ~~~~------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 226 KGER------------------------------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CCCc------------------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 0000 000012345688999999999999999999999999887544
No 105
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.1e-36 Score=320.60 Aligned_cols=249 Identities=25% Similarity=0.366 Sum_probs=195.1
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
+.||+|+||.||+|++..+++.||+|.+... ..+....+.+|++++++++||||++++++|.. ....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEeec
Confidence 4699999999999999888889999988643 23445678999999999999999999999643 36789999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 ~~~~L~~~~~~~---------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 143 (252)
T cd05084 76 QGGDFLTFLRTE---------GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSRE 143 (252)
T ss_pred cCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcc
Confidence 999999998522 22578999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIV 874 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (953)
...............+..|+|||.+.+..++.++|||||||++|||++ |..||....... ... .+
T Consensus 144 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~------------~~ 209 (252)
T cd05084 144 EEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TRE------------AI 209 (252)
T ss_pred cccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHH------------HH
Confidence 532211111111223567999999999999999999999999999998 888886422110 000 00
Q ss_pred cccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 875 DSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 875 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
...... .....++.++.+++.+||+.+|++|||+.||.++|+
T Consensus 210 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 210 EQGVRL------------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HcCCCC------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 000000 001123457889999999999999999999999886
No 106
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.5e-36 Score=325.41 Aligned_cols=269 Identities=23% Similarity=0.394 Sum_probs=210.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcC----CCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ----GKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
.++|.+.+.||+|+||.||+|.+.. +...||+|+++.. .......+.+|+.++++++||||+++++++.. .
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----~ 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE----D 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----C
Confidence 4678899999999999999999876 2468999988643 33446778899999999999999999998643 3
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
+...++++||+++++|.+++....... ......+++.+++.++.|++.||+|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGE--ANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccc--cccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCc
Confidence 467899999999999999986543221 11234689999999999999999999998 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
+||+|||+++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.||..... .....+..
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~ 233 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLK 233 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHH
Confidence 99999999986643332222223346778999999998899999999999999999999 9999864211 11111111
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
.... ......+++++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 234 ~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 DGYR------------------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cCCC------------------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0000 000112345789999999999999999999999999998764
No 107
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-36 Score=327.35 Aligned_cols=265 Identities=23% Similarity=0.388 Sum_probs=202.8
Q ss_pred cCCcccCcccccceeeEEEEEEc----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD----QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
++|++.+.||+|+||.||+|... ..+..||+|.++... ......+.+|++++++++||||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 46788899999999999999852 345689999997432 334467889999999999999999999853 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCC-------cccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITRED-------KTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVL 778 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 778 (953)
...++||||+++++|.+++....... ........+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 67899999999999999985332110 0011123588999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCcc
Q 043900 779 LDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMN 857 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~ 857 (953)
+++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.+... ..
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~ 234 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QE 234 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HH
Confidence 99999999999999986643322222233446778999999988899999999999999999999 9999864211 11
Q ss_pred HHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 858 LHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.......... .. ....+++++.+++.+||+.||++||++.+|.++|.+
T Consensus 235 ~~~~~~~~~~-----------~~-------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMVRKRQL-----------LP-------------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCc-----------CC-------------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111110000 00 001234568899999999999999999999998864
No 108
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-36 Score=327.89 Aligned_cols=279 Identities=24% Similarity=0.303 Sum_probs=198.9
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhc---CCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNI---RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|++.+.||+|+||+||+|++..+++.||+|.++... ........+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999999988999999986432 22234456677776665 799999999997654444456
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||++ ++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~--------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~k 148 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP--------PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVK 148 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 7899999997 48888885322 12589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|+|||+++...... ......|+..|+|||++.+..++.++||||+||++|||++|++||......+ ..........
T Consensus 149 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~ 224 (288)
T cd07863 149 LADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIG 224 (288)
T ss_pred ECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhC
Confidence 99999998664221 1223458899999999999999999999999999999999999986532211 1111111100
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
......+. ......... .. ..............+.++.+++.+|++.||++|||+.|++.
T Consensus 225 ~~~~~~~~-~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 225 LPPEDDWP-RDVTLPRGA--FS--PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCChhhCc-ccccccccc--cC--CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 000000000 00 00000000011134567889999999999999999999875
No 109
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.6e-36 Score=326.50 Aligned_cols=265 Identities=22% Similarity=0.369 Sum_probs=205.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCC-----eEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGK-----TTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 703 (953)
.++|.+.+.||+|+||.||+|.+.... ..||+|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 357889999999999999999986433 689999986432 334567889999999999999999999964
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.....++||||+++|+|.+++...............+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 34778999999999999999965433211112234588999999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~ 862 (953)
.+||+|||.++...............++..|+|||.+.+..++.++|||||||++||+++ |..||...... ......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~ 234 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFV 234 (277)
T ss_pred CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHH
Confidence 999999999986643332222333446789999999988899999999999999999998 99998642111 111111
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
. +.... ..+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 235 ~-----------~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 I-----------DGGHL-------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred h-----------cCCCC-------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0 00000 000123457899999999999999999999999886
No 110
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.4e-36 Score=324.83 Aligned_cols=262 Identities=25% Similarity=0.377 Sum_probs=202.6
Q ss_pred hcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 703 (953)
.++|.+.+.||+|+||.||+|.+.. ....||+|.+.... ......+.+|+.++++++|+||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 4578999999999999999999977 66789999886433 3345678999999999999999999998643
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
....++||||+++++|.+++....... .....+++.++++++.||+.|++|||+. +++||||||+||+++.++
T Consensus 81 -~~~~~lv~e~~~g~~L~~~i~~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 81 -RLPRFILLELMAGGDLKSFLRENRPRP---ERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG 153 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHHhCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC
Confidence 356799999999999999996543221 1223689999999999999999999999 999999999999998654
Q ss_pred ---cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHH
Q 043900 784 ---MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLH 859 (953)
Q Consensus 784 ---~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~ 859 (953)
.+||+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||....... ..
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~ 231 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VM 231 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HH
Confidence 699999999987633222222222234578999999999999999999999999999997 999987532111 11
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
... ..... ...+..++.++.+++.+||+.+|++||++.+|++.|.
T Consensus 232 ~~~------------~~~~~------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFV------------TGGGR------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHH------------HcCCc------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 100 00000 0001123457889999999999999999999999875
No 111
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.7e-36 Score=320.47 Aligned_cols=251 Identities=26% Similarity=0.363 Sum_probs=197.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.+.||+|+||.||+|.++.+. .||+|.++... .....+.+|+.++++++||||++++++|. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~-~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQI-KVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCc-eEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEE
Confidence 45888999999999999999987654 79999886432 23467889999999999999999999864 3467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++|+|.++++... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~ 144 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ---------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHhCc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCC
Confidence 999999999999985321 2478999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ........ ..
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~---~~ 218 (256)
T cd05114 145 GMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISR---GF 218 (256)
T ss_pred CCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC---CC
Confidence 99986532221 11222335678999999988899999999999999999999 89998642111 11111100 00
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
... .+...+.++.+++.+||+.+|++||+++|+++.|
T Consensus 219 --------~~~-------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 219 --------RLY-------------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --------CCC-------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000 0001234689999999999999999999999886
No 112
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.5e-36 Score=325.75 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=198.7
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
+|++.++||+|+||+||+|.+..+++.||+|++.... ......+.+|+.++++++||+|+++++++. .++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-----CCCeE
Confidence 4788899999999999999998888899999986432 222345778999999999999999998853 34689
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~ 144 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMG--------NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRIS 144 (285)
T ss_pred EEEEeccCCCcHHHHHHhcC--------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEe
Confidence 99999999999998885321 23589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||++........ .....|+..|+|||++.+..++.++||||+||++||+++|+.||.+.... ....... ..+..
T Consensus 145 Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~-~~~~~ 219 (285)
T cd05605 145 DLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVE-RRVKE 219 (285)
T ss_pred eCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHH-HHhhh
Confidence 9999987542221 12346899999999999999999999999999999999999999752211 0001100 00000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVRQ 932 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 932 (953)
. . .......+..+.+++.+||+.||++|| +++++++.
T Consensus 220 ~--------~-------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 220 D--------Q-------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred c--------c-------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0 0 000112455688999999999999999 78888653
No 113
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3e-36 Score=321.09 Aligned_cols=255 Identities=31% Similarity=0.479 Sum_probs=201.4
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.||+|++|.||+|.+..+ +.||+|.++.... ..+.+.+|+.++++++||||+++++++. .....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCC-eEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCee
Confidence 35688999999999999999998665 5899999875432 3567889999999999999999999854 346789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.+||+|
T Consensus 78 lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d 146 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGA--------GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVAD 146 (261)
T ss_pred eeeecccCCcHHHHHhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECC
Confidence 9999999999999996322 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||+++........ .......+..|+|||+..+..++.++||||||+++|||++ |+.||.+..... ....
T Consensus 147 fg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~------- 216 (261)
T cd05068 147 FGLARVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VLQQ------- 216 (261)
T ss_pred cceEEEccCCccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHH-------
Confidence 9999876522111 1112223468999999999999999999999999999999 999986532110 0000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
++..... .....++.++.+++.+|++.+|++||+++++.+.|++
T Consensus 217 -----~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 217 -----VDQGYRM------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -----HHcCCCC------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000000 0001234568999999999999999999999999986
No 114
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.1e-36 Score=324.11 Aligned_cols=248 Identities=23% Similarity=0.284 Sum_probs=193.4
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||+||+|.+..+++.||+|++.... ....+.+..|+++++.++||+|+++.+++. .....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-----TKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----CCCeEEEEEeCC
Confidence 699999999999999888899999986432 223456778999999999999999998853 446799999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++|+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 76 ~~g~L~~~~~~~~~------~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 146 (280)
T cd05608 76 NGGDLRYHIYNVDE------ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVE 146 (280)
T ss_pred CCCCHHHHHHhccc------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcccee
Confidence 99999988753221 134689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 147 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~------ 217 (280)
T cd05608 147 LKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS------ 217 (280)
T ss_pred cCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC------
Confidence 643222 2223468999999999999999999999999999999999999997532211 0011111000000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
...+...+.++.+++.+||+.||++|| +++|+++
T Consensus 218 ----------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 218 ----------------------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ----------------------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 000113456788999999999999999 6677765
No 115
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.1e-36 Score=328.25 Aligned_cols=268 Identities=22% Similarity=0.380 Sum_probs=206.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC-----CeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG-----KTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.++|++.+.||+|+||.||+|..... ...||+|.++.. .......+.+|+++++++ +|+||++++++|.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~---- 86 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT---- 86 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc----
Confidence 45688999999999999999998643 368999998743 233456788999999999 8999999999864
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSN 776 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 776 (953)
.+...++||||+++|+|.++++....... .......+++..++.++.|++.|++|||+. +|+||||||+|
T Consensus 87 -~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 87 -QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred -CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 34678999999999999999964321100 002234689999999999999999999998 99999999999
Q ss_pred eEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCC
Q 043900 777 VLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGD 855 (953)
Q Consensus 777 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~ 855 (953)
|+++.++.+||+|||.++.+.............++..|+|||++.+..++.++|||||||++||+++ |..||......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 241 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 241 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-
Confidence 9999999999999999987643322222223345678999999988899999999999999999998 99998642211
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.... ....... ...+..++.++.+++.+||+.||++|||+.|+++.|++
T Consensus 242 ----~~~~---------~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 242 ----ELFK---------LLKEGYR------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred ----HHHH---------HHHcCCc------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 1000 0000000 00011234568899999999999999999999999998
Q ss_pred HH
Q 043900 936 IK 937 (953)
Q Consensus 936 i~ 937 (953)
+.
T Consensus 291 ~~ 292 (293)
T cd05053 291 ML 292 (293)
T ss_pred hh
Confidence 74
No 116
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-36 Score=323.35 Aligned_cols=247 Identities=23% Similarity=0.302 Sum_probs=192.1
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||.||+++.+.+++.||+|.+.... .........|++++++++||||+++.+++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 799999999999999888899999986321 12234556799999999999999999885 3457899999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 76 ~g~~L~~~~~~~~--------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 76 NGGDLKYHIYNVG--------ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVE 144 (277)
T ss_pred CCCCHHHHHHhcc--------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeee
Confidence 9999998885322 22588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
..... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 145 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~------ 214 (277)
T cd05607 145 LKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDE------ 214 (277)
T ss_pred cCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccc------
Confidence 64322 222345899999999999989999999999999999999999999753221 11111111111000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... .....+.++.+++.+||+.||++||++.|+++.
T Consensus 215 --~~~-------------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 215 --VKF-------------------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred --ccc-------------------ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 000 000234568899999999999999999877643
No 117
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-36 Score=334.25 Aligned_cols=245 Identities=21% Similarity=0.272 Sum_probs=191.1
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHH---hhcCCCCeeEEEeeecccccCCCC
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTL---KNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|.+++ +.++||||+++++++. ..+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-----~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-----TED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-----cCC
Confidence 677899999999999999999888899999997432 22345566666554 5668999999999853 447
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|..+++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~~lv~E~~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~k 141 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH-----------TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVK 141 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEE
Confidence 8999999999999998874 13589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|+|||+++..... ........|++.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 142 L~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~i- 213 (324)
T cd05589 142 IADFGLCKEGMGF--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDSI- 213 (324)
T ss_pred eCcccCCccCCCC--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHH-
Confidence 9999998753221 12223456899999999999999999999999999999999999999753211 111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 931 (953)
..... ..+...+..+.+++.+||+.||++||+ +.++++
T Consensus 214 -------~~~~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 214 -------VNDEV--------------------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -------HhCCC--------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 00000 000123456789999999999999994 555554
No 118
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=332.30 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=200.9
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeecc
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQ 716 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 716 (953)
-++|+|.||+||-|++..++..+|||.+........+-+..|+..-++++|.|||+++|.|. .+++.-|.||.++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-----enGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS-----ENGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC-----CCCeEEEEeecCC
Confidence 36999999999999999999999999998777777788899999999999999999999954 4478899999999
Q ss_pred CCchhhccccCCcCCcccCCcccc--CHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec-CCCcEEEeccccc
Q 043900 717 NRSLEEWLHPITREDKTEEAPRSL--NLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD-EEMMAHVSDFGLA 793 (953)
Q Consensus 717 ~g~L~~~l~~~~~~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~DfG~a 793 (953)
||+|.+.++. ..+++ .+.++--+.+||++||.|||+. .|||||||-+||||+ -.|.+||+|||-+
T Consensus 656 GGSLSsLLrs---------kWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 656 GGSLSSLLRS---------KWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred CCcHHHHHHh---------ccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccc
Confidence 9999999952 23445 6778888999999999999999 999999999999996 6889999999999
Q ss_pred eecCCCCCcccccccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
+.+.. -........||..|||||++..+ .|+.++|||||||++.||.||++||.........+ .+-.
T Consensus 724 KRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVG------ 792 (1226)
T KOG4279|consen 724 KRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVG------ 792 (1226)
T ss_pred hhhcc--CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhc------
Confidence 87642 22333345699999999998776 48899999999999999999999997543221111 0000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+ .+. .++.+.+.+.+...++.+|+.+||.+||+|+++++
T Consensus 793 ------m------------yKv---HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 793 ------M------------YKV---HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ------c------------eec---CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 0 000 01123366778899999999999999999999986
No 119
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-36 Score=324.97 Aligned_cols=268 Identities=21% Similarity=0.363 Sum_probs=204.7
Q ss_pred hhcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
..++|++.+.||+|+||.||+|..++ ....||+|.++... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS---- 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 45689999999999999999997653 24579999886332 233456788999999999999999999854
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.+...++||||+++|+|.+++................++..+..++.|++.||+|||+. +|+||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 80 -KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred -CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 34678999999999999999975432211222234567888999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-----~~ 230 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-----QV 230 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HH
Confidence 9999999999986543322222222345778999999998899999999999999999999 78888642211 11
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.... .+..... ....+++.+.+++.+||+.||++|||+.|+++.+++.
T Consensus 231 ~~~~--------~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 231 LKFV--------MDGGYLD-------------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHH--------HcCCCCC-------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1100 0000000 0012345799999999999999999999999988875
No 120
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-37 Score=295.51 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=204.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--------HGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
--..|...+.+|+|..++|-++..+.++..+|+|++.... ....+.-.+|+.+++++ .||+|+.+.++
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~--- 91 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV--- 91 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee---
Confidence 3456777889999999999999999999999999996322 11234556899999999 69999999999
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
++.+...++|+|.|+.|.|.+++. ....+++.+..+|++|+.+|++|||.. .||||||||+|||+
T Consensus 92 --yes~sF~FlVFdl~prGELFDyLt----------s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILl 156 (411)
T KOG0599|consen 92 --YESDAFVFLVFDLMPRGELFDYLT----------SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILL 156 (411)
T ss_pred --ccCcchhhhhhhhcccchHHHHhh----------hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheee
Confidence 556688999999999999999994 234689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCcccccccccccccccccccCC------CCCCcccchHHHHHHHHHHHhCCCCCCCccc
Q 043900 780 DEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG------SEVSINGDVYSYGILLLELVTRKKPVDSMFE 853 (953)
Q Consensus 780 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDv~slG~vl~elltg~~pf~~~~~ 853 (953)
+++.++||+|||+|+.++++. .....+|||+|.|||.+.- ..|+...|+||+||++|.++.|.+||..-
T Consensus 157 ddn~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-- 231 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-- 231 (411)
T ss_pred ccccceEEeccceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--
Confidence 999999999999999876443 3456789999999998643 25788899999999999999999999631
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... +.+. +.+. . .+.+.+++.+.+....+++.+|++.||.+|.|++|+++.
T Consensus 232 kQml---MLR~-ImeG-----------k------------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 232 KQML---MLRM-IMEG-----------K------------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHHH---HHHH-HHhc-----------c------------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 1100 0111 0010 0 012233444667788999999999999999999999873
No 121
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=331.81 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=207.1
Q ss_pred CcccCcccccceeeEEEEEEcCC---CeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 633 FASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
....+.||+|.||.|++|.|... ...||||.++..... ...+|.+|+.+|.+++|||++++||++.+ ...
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QPA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------chh
Confidence 34568899999999999999642 345999999865544 67899999999999999999999999642 567
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
.+|||.++.|+|.+.+++.. ...+-......++.|||.||.||.++ ++||||+..+|+++-....|||+
T Consensus 186 mMV~ELaplGSLldrLrka~--------~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~ 254 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAK--------KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKIC 254 (1039)
T ss_pred hHHhhhcccchHHHHHhhcc--------ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeee
Confidence 89999999999999997522 23688888999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccc-cccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhC
Q 043900 789 DFGLARFLPLSPAQTSS-IDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|||+.+-++..+..... ....-.+.|+|||.+....++.++|||+|||++|||+| |..||.+....
T Consensus 255 DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------ 322 (1039)
T KOG0199|consen 255 DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------ 322 (1039)
T ss_pred cccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------------
Confidence 99999988765544333 33446789999999999999999999999999999999 88998763221
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
.+.+.+| ...+...+..|++.++++|+.||..+|++|||+..+.+.+
T Consensus 323 --qIL~~iD------------------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 323 --QILKNID------------------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred --HHHHhcc------------------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1111111 1123344457889999999999999999999999998554
No 122
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.2e-36 Score=322.26 Aligned_cols=262 Identities=21% Similarity=0.314 Sum_probs=206.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|+...+++.||||.+... ......++.+|+.+++.++||||+++++++. .++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 4688899999999999999999888889999988642 2334567889999999999999999999854 3467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.+++..... ....+++..++.++.|+++|++|||+. +++|+||||+||+++.++.++|
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l 147 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK------QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEE
Confidence 8999999999999998853221 123689999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||.+........ ......++..|+|||++.+..++.++||||||+++|||++|..||...... ........
T Consensus 148 ~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~-- 220 (267)
T cd08229 148 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI-- 220 (267)
T ss_pred CcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhh--
Confidence 99999986643221 122345889999999998889999999999999999999999998642211 11111000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
.....+.. .....++++.+++.+||+.||++||||.+|++.++++.
T Consensus 221 ---~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 221 ---EQCDYPPL---------------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ---hcCCCCCC---------------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 00000000 00134567999999999999999999999999998763
No 123
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.8e-36 Score=331.38 Aligned_cols=271 Identities=24% Similarity=0.353 Sum_probs=204.7
Q ss_pred hcCCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
.++|++.+.||+|+||.||+|.+. .+++.||||+++... ......+.+|+.++.++ +||||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 357999999999999999999853 345689999997432 33456788999999999 68999999998743
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcc-------------------------------------------------
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKT------------------------------------------------- 733 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------------------------------------------------- 733 (953)
.+...++||||+++|+|.++++........
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 235678999999999999998643210000
Q ss_pred --------cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCcccc
Q 043900 734 --------EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSS 805 (953)
Q Consensus 734 --------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~ 805 (953)
......+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 00113478899999999999999999999 9999999999999999999999999999865433222222
Q ss_pred cccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchh
Q 043900 806 IDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDED 884 (953)
Q Consensus 806 ~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 884 (953)
....++..|+|||++.+..++.++||||||+++||+++ |..||....... ........... .
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~-----------~----- 301 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTR-----------M----- 301 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCC-----------C-----
Confidence 23346678999999988899999999999999999997 999986532111 01000000000 0
Q ss_pred hhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 885 LAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
..+...++++.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 302 --------------~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 302 --------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000123468899999999999999999999999998865
No 124
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.8e-36 Score=335.34 Aligned_cols=270 Identities=21% Similarity=0.316 Sum_probs=205.3
Q ss_pred hhcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVD 701 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 701 (953)
..++|.+.+.||+|+||.||+|++.+ .++.||+|+++... ....+.+.+|++++.++. ||||++++++|..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 34567888999999999999999643 34679999997432 333457889999999997 9999999999643
Q ss_pred cCCCCceeEEEeeccCCchhhccccCCcCCc-------------------------------------------------
Q 043900 702 YQGNDFKALVFEFMQNRSLEEWLHPITREDK------------------------------------------------- 732 (953)
Q Consensus 702 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------------------------- 732 (953)
....++||||+++|+|.++++.......
T Consensus 113 ---~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 113 ---GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred ---CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 3678999999999999999975432100
Q ss_pred ---------------------------------------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 733 ---------------------------------------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 733 ---------------------------------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
.......+++..++.++.|++.||+|||+. +++|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 001123578889999999999999999998 99999999
Q ss_pred CCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcc
Q 043900 774 PSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMF 852 (953)
Q Consensus 774 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~ 852 (953)
|+||++++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999986543222222223346788999999998899999999999999999998 889986432
Q ss_pred cCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 853 EGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..+. ... .+..... ...+..++.++.+++.+||..+|++||+++||++.
T Consensus 347 ~~~~-~~~------------~~~~~~~------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 347 MNEQ-FYN------------AIKRGYR------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred chHH-HHH------------HHHcCCC------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1110 000 0000000 00001234578999999999999999999999999
Q ss_pred HHHHH
Q 043900 933 LQSIK 937 (953)
Q Consensus 933 L~~i~ 937 (953)
|+.+.
T Consensus 396 L~~~~ 400 (401)
T cd05107 396 VGDLL 400 (401)
T ss_pred HHHHh
Confidence 98763
No 125
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.6e-37 Score=336.12 Aligned_cols=243 Identities=19% Similarity=0.258 Sum_probs=193.0
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+++++.++||||+++.+++. .++..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-----~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----cCCEEEEEEe
Confidence 4699999999999999988899999999743 2234456788999999999999999998853 4478999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
|+++|+|..++.. ...+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~ 142 (325)
T cd05594 76 YANGGELFFHLSR----------ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 142 (325)
T ss_pred CCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCC
Confidence 9999999988842 2358999999999999999999997 6 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~~~~-- 213 (325)
T cd05594 143 CKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEI-- 213 (325)
T ss_pred CeecCCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhcCCC--
Confidence 97542211 1222346999999999999999999999999999999999999999642111 11111000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 932 (953)
.. +...++++.+++.+||+.||++|+ ++.++++.
T Consensus 214 ----~~----------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 ----RF----------------------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ----CC----------------------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00 002345688999999999999996 89998753
No 126
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.1e-36 Score=319.15 Aligned_cols=262 Identities=22% Similarity=0.334 Sum_probs=207.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|....+++.||+|.++. ......+.+.+|++++++++|++++++++++. .++.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 578999999999999999999998888999998863 22334567889999999999999999999864 3467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.+++..... ....+++.+++.++.|++.|++|||+. |++||||+|+||+++.++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l 147 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK------QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKL 147 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc------cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEE
Confidence 8999999999999998854321 123588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||.+........ ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.... ............
T Consensus 148 ~d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~ 222 (267)
T cd08224 148 GDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEK 222 (267)
T ss_pred eccceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhc
Confidence 99999986543211 1223458889999999998899999999999999999999999986421 111111110000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
. ..... .....+..+.+++.+||..+|++|||+.+|+++++++.
T Consensus 223 ~--------~~~~~------------------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 C--------DYPPL------------------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C--------CCCCC------------------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0 00000 00134457889999999999999999999999999874
No 127
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.4e-36 Score=324.01 Aligned_cols=264 Identities=24% Similarity=0.385 Sum_probs=204.0
Q ss_pred cCCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|+..++||+|+||.||+|... ..+..||+|.++.........+.+|+++++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-----G 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-----C
Confidence 35778899999999999999753 3455799999876666667789999999999999999999998643 4
Q ss_pred CceeEEEeeccCCchhhccccCCcCC-----cccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITRED-----KTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~-----~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
...++||||+++++|.+++....... ........+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 67899999999999999996443210 0011223589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHH
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~ 859 (953)
+++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ..
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 234 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AI 234 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HH
Confidence 999999999999986543222222223335788999999999999999999999999999998 899986422211 00
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
.......+ ...+..+++.+.+++.+||+.||++||++.||.+.|+
T Consensus 235 ~~~~~~~~------------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ECITQGRE------------------------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHcCcc------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00000000 0000133456889999999999999999999999886
No 128
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.3e-36 Score=326.44 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=202.2
Q ss_pred cCCcccCcccccceeeEEEEEEc-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 631 DGFASANEIGVGSFGSVYKGILD-----QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
++|.+.+.||+|+||.||+|.+. .....||+|+++... ....+.+.+|+++++++ +||||++++++|..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 110 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI---- 110 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec----
Confidence 46899999999999999999862 334579999987443 33456788999999999 79999999998643
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++
T Consensus 111 -~~~~~lv~e~~~~~~L~~~i~~~~~--------~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~ 178 (302)
T cd05055 111 -GGPILVITEYCCYGDLLNFLRRKRE--------SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGK 178 (302)
T ss_pred -CCceEEEEEcCCCCcHHHHHHhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCC
Confidence 3678999999999999999863221 2389999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~ 862 (953)
.+|++|||.++...............++..|+|||++.+..++.++||||+||++|||++ |..||......+ ......
T Consensus 179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~ 257 (302)
T cd05055 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLI 257 (302)
T ss_pred eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHH
Confidence 999999999986643322212222346788999999999999999999999999999998 999986532211 111110
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
+...... .....++++.+++.+||+.+|++|||+.|+++.|++.
T Consensus 258 ------------~~~~~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 ------------KEGYRMA------------------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ------------HcCCcCC------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0000000 0001235688999999999999999999999999874
No 129
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-36 Score=323.54 Aligned_cols=255 Identities=20% Similarity=0.278 Sum_probs=199.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.++++++||||+++++++. ..+..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 347999999999999999999998888899999997555455567889999999999999999999864 336789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.++++. ...+++.++..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|
T Consensus 83 iv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~d 149 (267)
T cd06646 83 ICMEYCGGGSLQDIYHV----------TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLAD 149 (267)
T ss_pred EEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECc
Confidence 99999999999998852 23578999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||......+..
T Consensus 150 fg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--------- 218 (267)
T cd06646 150 FGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--------- 218 (267)
T ss_pred Cccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh---------
Confidence 99998663221 1122345889999999874 345788999999999999999999998642211100
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..+....... .........+.++.+++.+||+.+|++|||++++++.
T Consensus 219 ----~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 219 ----FLMSKSNFQP---------------PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ----eeeecCCCCC---------------CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0000000000 0000011234578899999999999999999999864
No 130
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.1e-36 Score=339.87 Aligned_cols=201 Identities=21% Similarity=0.295 Sum_probs=171.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.|+..+.||+|+||+||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++. +.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 588899999999999999999999999999999643 2334567889999999999999999999854 44789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~----------~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~ 143 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR----------MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLT 143 (381)
T ss_pred EEEEecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEe
Confidence 999999999999999852 23578889999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCC---------------------------------------------cccccccccccccccccccCCC
Q 043900 789 DFGLARFLPLSPA---------------------------------------------QTSSIDAKGSIGYIAPEYGLGS 823 (953)
Q Consensus 789 DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 823 (953)
|||+++.+..... ........||+.|+|||++.+.
T Consensus 144 DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (381)
T cd05626 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK 223 (381)
T ss_pred eCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC
Confidence 9999864321000 0001234699999999999999
Q ss_pred CCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 824 EVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 824 ~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
.++.++|||||||++|||++|+.||..
T Consensus 224 ~~~~~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 224 GYTQLCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred CCCCccceeehhhHHHHHHhCCCCCcC
Confidence 999999999999999999999999975
No 131
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.2e-36 Score=330.65 Aligned_cols=242 Identities=21% Similarity=0.290 Sum_probs=188.6
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++.. .....+....|..++... +||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-----TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 4699999999999999998889999999743 223344556677777654 8999999998853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~gg~L~~~~~~----------~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~ 142 (316)
T cd05592 76 EYLNGGDLMFHIQS----------SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGM 142 (316)
T ss_pred cCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcC
Confidence 99999999998852 23588899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 143 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~~i~~~~--- 212 (316)
T cd05592 143 CKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFDSILNDR--- 212 (316)
T ss_pred CeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCC---
Confidence 98643222 2223456899999999999999999999999999999999999999753211 1111100000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT-NVVR 931 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 931 (953)
... +..++.++.+++.+||+.||++||++. ++++
T Consensus 213 ---~~~----------------------~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 213 ---PHF----------------------PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred ---CCC----------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 000 012344678999999999999999875 4543
No 132
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=344.27 Aligned_cols=286 Identities=22% Similarity=0.277 Sum_probs=199.8
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC---CCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ---GND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---~~~ 706 (953)
..+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++....+. ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 357999999999999999999999888899999885322 2345799999999999999999886433221 223
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-cE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-MA 785 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~ 785 (953)
..++||||+++ ++.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~------~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~v 210 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYAR------NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTL 210 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCce
Confidence 56799999975 77776643211 134689999999999999999999999 999999999999998665 79
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||.+....+ .+......
T Consensus 211 kL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~ 286 (440)
T PTZ00036 211 KLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQV 286 (440)
T ss_pred eeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 999999998664322 22234689999999998764 68999999999999999999999997532211 11111111
Q ss_pred hCCch--hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHHHH
Q 043900 865 ALPDH--VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR--QLQSIKN 938 (953)
Q Consensus 865 ~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~i~~ 938 (953)
..... ......+ ...+..... ......+...+...++++.+++.+||+.||.+|||+.|+++ .++.+++
T Consensus 287 ~~~p~~~~~~~~~~----~~~~~~~~~-~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 287 LGTPTEDQLKEMNP----NYADIKFPD-VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred hCCCCHHHHHHhch----hhhcccCCc-cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 10000 0000000 000000000 00000001111123567899999999999999999999985 3555543
No 133
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-36 Score=340.71 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=197.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||+||+|++..+++.||||+++.. .......+.+|+++++.++||||+++++++. .++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-----DENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCe
Confidence 4789999999999999999999988889999999743 2334456788999999999999999999854 4578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 142 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK----------KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKL 142 (364)
T ss_pred EEEEECCCCCcHHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEE
Confidence 9999999999999999852 23589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcc------------------------------------cccccccccccccccccCCCCCCcccch
Q 043900 788 SDFGLARFLPLSPAQT------------------------------------SSIDAKGSIGYIAPEYGLGSEVSINGDV 831 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv 831 (953)
+|||+++.+....... ......||+.|+|||++.+..++.++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 222 (364)
T cd05599 143 SDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDW 222 (364)
T ss_pred eecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeee
Confidence 9999997653211000 0112358999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHH
Q 043900 832 YSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRI 911 (953)
Q Consensus 832 ~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 911 (953)
|||||++|||++|..||...... ......... . .... .......++++.++
T Consensus 223 wSlG~il~el~~G~~Pf~~~~~~-----~~~~~i~~~-----~-~~~~------------------~~~~~~~s~~~~~l 273 (364)
T cd05599 223 WSLGVIMYEMLVGYPPFCSDNPQ-----ETYRKIINW-----K-ETLQ------------------FPDEVPLSPEAKDL 273 (364)
T ss_pred ecchhHHHHhhcCCCCCCCCCHH-----HHHHHHHcC-----C-CccC------------------CCCCCCCCHHHHHH
Confidence 99999999999999999753211 111000000 0 0000 00000124467789
Q ss_pred hhccccCCCCCCCC---HHHHHH
Q 043900 912 GVACSMESPGDRMN---MTNVVR 931 (953)
Q Consensus 912 ~~~cl~~dP~~RPt---~~evl~ 931 (953)
+.+|+. +|.+|++ ++|+++
T Consensus 274 i~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 274 IKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHcc-CHhhcCCCCCHHHHhc
Confidence 999996 9999998 888876
No 134
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.5e-36 Score=337.11 Aligned_cols=202 Identities=24% Similarity=0.298 Sum_probs=173.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||+||+|....+++.||+|+++... ......+.+|+.++.+++||+|+++++++ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47899999999999999999999888899999996432 23345678899999999999999999985 34578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL 142 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMK----------KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKL 142 (363)
T ss_pred EEEEEcCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEE
Confidence 9999999999999999852 23588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCc---------------------------------ccccccccccccccccccCCCCCCcccchHHH
Q 043900 788 SDFGLARFLPLSPAQ---------------------------------TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSY 834 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~sl 834 (953)
+|||+++.+...... .......||+.|+|||++.+..++.++|||||
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSl 222 (363)
T cd05628 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (363)
T ss_pred eeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhh
Confidence 999999765321100 00123469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCC
Q 043900 835 GILLLELVTRKKPVDS 850 (953)
Q Consensus 835 G~vl~elltg~~pf~~ 850 (953)
||++|||++|+.||.+
T Consensus 223 Gvil~ell~G~~Pf~~ 238 (363)
T cd05628 223 GVIMYEMLIGYPPFCS 238 (363)
T ss_pred HHHHHHHHhCCCCCCC
Confidence 9999999999999975
No 135
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.8e-36 Score=332.55 Aligned_cols=243 Identities=23% Similarity=0.301 Sum_probs=191.8
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++.. .......+..|.+++..+ +||+|+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-----TKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCeEEEEE
Confidence 4699999999999999988889999999743 233445677888888876 7999999999853 447799999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~ 142 (321)
T cd05591 76 EYVNGGDLMFQIQR----------SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGM 142 (321)
T ss_pred eCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeeccc
Confidence 99999999988852 23578899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..........
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~~i~~~~--- 212 (321)
T cd05591 143 CKEGILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFESILHDD--- 212 (321)
T ss_pred ceecccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC---
Confidence 97543221 1223346899999999999999999999999999999999999999753211 1111100000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-------CHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-------NMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~evl~~ 932 (953)
.. .+..++.++.+++.+|++.||++|| +++++++.
T Consensus 213 -----~~--------------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 213 -----VL--------------------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -----CC--------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 00 0001235688999999999999999 77777643
No 136
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.9e-36 Score=323.66 Aligned_cols=264 Identities=22% Similarity=0.337 Sum_probs=201.8
Q ss_pred CCcccCcccccceeeEEEEEEcCC-----CeEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQG-----KTTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+|++.+.||+|+||.||+|.+..+ +..||+|+++.... .....+.+|+.+++.++||||+++++++.. .
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~ 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK-----E 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----C
Confidence 477889999999999999997543 46899999974432 234668899999999999999999999643 3
Q ss_pred CceeEEEeeccCCchhhccccCCcC------CcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITRE------DKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
...++++||+++++|.+++...... .........+++..++.++.|++.||+|+|+. +++||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 6789999999999999998532111 00111234588999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccH
Q 043900 780 DEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNL 858 (953)
Q Consensus 780 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~ 858 (953)
++++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---- 233 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---- 233 (283)
T ss_pred cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 9999999999999886543322222233446789999999988899999999999999999998 88888642111
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.+........ ... ....++..+.+++.+||+.+|++||+++||++.|+.
T Consensus 234 -~~~~~i~~~~--------~~~-------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 -DVIEMIRNRQ--------VLP-------------------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHHcCC--------cCC-------------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111110000 000 011345668899999999999999999999999863
No 137
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.2e-36 Score=324.38 Aligned_cols=268 Identities=22% Similarity=0.352 Sum_probs=204.8
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe--EEEEEEeec-cchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT--TVAVKVFNL-LHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 706 (953)
++|++.+.||+|+||.||+|....++. .+++|.++. ......+.+.+|++++.++ +||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 478899999999999999999876553 478888864 3334456789999999999 7999999999864 336
Q ss_pred ceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
..++||||+++++|.++++....... .......+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 78999999999999999965332111 011223589999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHH
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~ 859 (953)
+++.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 154 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~----- 225 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA----- 225 (297)
T ss_pred CCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 9999999999998643211 11111223567999999988899999999999999999998 99998643211
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
...... ..... ...+..++.++.+++.+||+.+|.+|||++++++.|+.+.+.
T Consensus 226 ~~~~~~---------~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 226 ELYEKL---------PQGYR------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHHHHH---------hcCCC------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111100 00000 000012345688999999999999999999999999998775
Q ss_pred hc
Q 043900 940 LL 941 (953)
Q Consensus 940 ~~ 941 (953)
..
T Consensus 279 ~~ 280 (297)
T cd05089 279 RK 280 (297)
T ss_pred hc
Confidence 43
No 138
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.9e-36 Score=331.84 Aligned_cols=238 Identities=24% Similarity=0.284 Sum_probs=188.8
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|+++.+++.||+|+++.. .......+..|..++... +||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-----~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-----TPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-----cCCEEEEEE
Confidence 4699999999999999988889999999642 233456677888888877 6999999999853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 Ey~~~g~L~~~i~~----------~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~ 142 (320)
T cd05590 76 EFVNGGDLMFHIQK----------SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM 142 (320)
T ss_pred cCCCCchHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCC
Confidence 99999999998852 23588999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~--- 212 (320)
T cd05590 143 CKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILNDE--- 212 (320)
T ss_pred CeecCcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCC---
Confidence 87542211 1223346899999999999999999999999999999999999999753211 1111110000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT 927 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 927 (953)
. . .+...+.++.+++.+|++.||++||++.
T Consensus 213 -----~-~-------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 213 -----V-V-------------------YPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred -----C-C-------------------CCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 0 0 0001245688999999999999999983
No 139
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.4e-36 Score=332.01 Aligned_cols=242 Identities=21% Similarity=0.259 Sum_probs=190.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCC-CeeEEEeeecccccCCCCc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHR-NLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 707 (953)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|.+++..+.|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 488899999999999999999998889999999742 233456778899999999765 577887774 34478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL 142 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ----------VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKI 142 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEE
Confidence 9999999999999998852 23578899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||+||+.||...... ......
T Consensus 143 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i-- 213 (324)
T cd05587 143 ADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----ELFQSI-- 213 (324)
T ss_pred eecCcceecCCCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHH--
Confidence 9999987532111 1223346899999999999999999999999999999999999999753211 111000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
..... . .+...+.++.+++.+||..||++||++
T Consensus 214 ------~~~~~--~------------------~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 214 ------MEHNV--S------------------YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ------HcCCC--C------------------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00000 0 000223467899999999999999986
No 140
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.1e-36 Score=337.78 Aligned_cols=283 Identities=20% Similarity=0.241 Sum_probs=200.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999888889999998632 233456788999999999999999999997544222223789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+. ++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~-~~l~~~~~~----------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~D 146 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS----------PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICD 146 (372)
T ss_pred EEeeccc-cCHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecc
Confidence 9999996 578777742 23689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||+++....... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||......+ ...........
T Consensus 147 fg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~ 223 (372)
T cd07853 147 FGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGT 223 (372)
T ss_pred ccceeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCC
Confidence 999986543221 222334578999999998774 47899999999999999999999997532211 11111111110
Q ss_pred hhhhhccccccCCchhhhhcccc--hhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQ--RQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
...+.+...... .......... +............++++.+++.+|++.||++|||++|+++.
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 224 PSLEAMRSACEG-ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCHHHHHHhhHH-HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000000 0000000000 00000000111235678899999999999999999999864
No 141
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.8e-36 Score=327.74 Aligned_cols=277 Identities=22% Similarity=0.322 Sum_probs=199.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|.+.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 57999999999999999999999888899999987433 223456778999999999999999999964 346799
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 lv~e~~~~-~l~~~~~~~---------~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~D 147 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDC---------GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLAD 147 (309)
T ss_pred EEEeCCCC-CHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECc
Confidence 99999975 888877422 22478899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.++...... .......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+ ......+ ....
T Consensus 148 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~-~~~~ 223 (309)
T cd07872 148 FGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFR-LLGT 223 (309)
T ss_pred cccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HhCC
Confidence 99997643221 12223457899999998765 468899999999999999999999997532221 1111111 1111
Q ss_pred hhhhhcccccc-CCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLL-SDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...+....... ............ +..........+.++.+++.+|++.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 224 PTEETWPGISSNDEFKNYNFPKYK--PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHhhhcchhhhhhhhcCccC--CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 10000000000 000000000000 00000111234567889999999999999999999987
No 142
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.7e-37 Score=340.23 Aligned_cols=254 Identities=22% Similarity=0.270 Sum_probs=201.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|.+.+.||+|+||+||+|++..+++.||+|+++... ......+.+|++++..++||||+++++++ .+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 46899999999999999999999888899999997432 23456788999999999999999999884 44578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL 142 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK----------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKL 142 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEe
Confidence 99999999999999999532 3588999999999999999999998 9999999999999999999999
Q ss_pred eccccceecCCCC---------------------------CcccccccccccccccccccCCCCCCcccchHHHHHHHHH
Q 043900 788 SDFGLARFLPLSP---------------------------AQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLE 840 (953)
Q Consensus 788 ~DfG~a~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~e 840 (953)
+|||++....... .........||+.|+|||++.+..++.++|||||||++||
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 143 ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 9999998664332 0112234568999999999999999999999999999999
Q ss_pred HHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 043900 841 LVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESP 920 (953)
Q Consensus 841 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 920 (953)
|++|+.||...... ........ .. .... .......++++.+++.+|++ ||
T Consensus 223 ll~g~~Pf~~~~~~-----~~~~~i~~-----~~-~~~~------------------~p~~~~~~~~~~~li~~ll~-dp 272 (350)
T cd05573 223 MLYGFPPFYSDTLQ-----ETYNKIIN-----WK-ESLR------------------FPPDPPVSPEAIDLICRLLC-DP 272 (350)
T ss_pred hccCCCCCCCCCHH-----HHHHHHhc-----cC-Cccc------------------CCCCCCCCHHHHHHHHHHcc-Ch
Confidence 99999999753211 00000000 00 0000 00000134568899999997 99
Q ss_pred CCCCC-HHHHHHH
Q 043900 921 GDRMN-MTNVVRQ 932 (953)
Q Consensus 921 ~~RPt-~~evl~~ 932 (953)
.+||+ ++|+++.
T Consensus 273 ~~R~~s~~~ll~h 285 (350)
T cd05573 273 EDRLGSFEEIKSH 285 (350)
T ss_pred hhcCCCHHHHhcC
Confidence 99999 9999874
No 143
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.3e-36 Score=333.25 Aligned_cols=205 Identities=26% Similarity=0.294 Sum_probs=171.5
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQG 704 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 704 (953)
...++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++.... ...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3467899999999999999999999988889999998632 3344567889999999999999999999875321 122
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+++ ++.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~ 161 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 161 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh------------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCC
Confidence 2457999999965 5666552 2477888999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
+||+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 162 ~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 162 LKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred EEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999999754321 1223346899999999999999999999999999999999999999753
No 144
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7.9e-36 Score=317.79 Aligned_cols=254 Identities=27% Similarity=0.447 Sum_probs=201.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.++||+|+||.||+|++.++. .||+|+++.... ..+.+.+|++++++++||||+++++++. ....++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYI 77 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcEE
Confidence 56899999999999999999987765 699999874332 3457889999999999999999998742 245789
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEM--------GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred EEEcCCCCcHHHHHhhcc--------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccC
Confidence 999999999999996321 23578999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++.+...... ......++..|+|||+..+..++.++||||||+++||++| |..||......+ ....
T Consensus 147 g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~----- 215 (262)
T cd05071 147 GLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQ----- 215 (262)
T ss_pred Cceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHH-----
Confidence 999876433221 1223346778999999988899999999999999999999 888886432111 0000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
...... ......++..+.+++.+|++.||++||+++++++.|++.
T Consensus 216 ----~~~~~~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 216 ----VERGYR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----HhcCCC------------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000000 000113456789999999999999999999999998864
No 145
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-35 Score=322.72 Aligned_cols=271 Identities=20% Similarity=0.325 Sum_probs=201.1
Q ss_pred cCCcccCcccccceeeEEEEEEcCC--------------CeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEe
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQG--------------KTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILT 695 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~ 695 (953)
++|++.+.||+|+||.||+|...+. ...||+|+++.. .......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5789999999999999999987543 235899998643 3334567899999999999999999999
Q ss_pred eecccccCCCCceeEEEeeccCCchhhccccCCcCCc--ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 696 ACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDK--TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 696 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
++. .....++||||+++++|.+++........ .......+++..++.++.|++.||+|||+. +++|||||
T Consensus 85 ~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 964 34678999999999999999864321100 011123478999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh--CCCCCCCc
Q 043900 774 PSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT--RKKPVDSM 851 (953)
Q Consensus 774 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~pf~~~ 851 (953)
|+||++++++.+||+|||++................++..|+|||+..+..++.++|||||||++|||++ |..||...
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999999999976543322222223345778999999988899999999999999999998 56677642
Q ss_pred ccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 852 FEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... ................ . ......+++.+.+++.+||+.||++||++++|++
T Consensus 237 ~~~~--~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 237 SDEQ--VIENTGEFFRNQGRQI----Y-------------------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ChHH--HHHHHHHhhhhccccc----c-------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2111 1000000000000000 0 0000123457999999999999999999999999
Q ss_pred HHH
Q 043900 932 QLQ 934 (953)
Q Consensus 932 ~L~ 934 (953)
.|+
T Consensus 292 ~l~ 294 (295)
T cd05097 292 FLR 294 (295)
T ss_pred HHh
Confidence 886
No 146
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.6e-36 Score=325.04 Aligned_cols=272 Identities=22% Similarity=0.367 Sum_probs=208.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEc-------CCCeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILD-------QGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
..++|.+.+.||+|+||.||+|+.. .....||+|.++.. .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~- 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT- 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe-
Confidence 3457889999999999999999852 22347999998643 234457789999999999 8999999999864
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcc------cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKT------EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
.....++||||+++|+|.+++......... ......+++.+++.++.||++||+|||+. |++|||||
T Consensus 92 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 92 ----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred ----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 346789999999999999999754321100 01234689999999999999999999999 99999999
Q ss_pred CCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcc
Q 043900 774 PSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMF 852 (953)
Q Consensus 774 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~ 852 (953)
|+||++++++.+||+|||.++...............+++.|+|||++.+..++.++||||||+++||+++ |..||....
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654333222333346778999999999899999999999999999998 788875421
Q ss_pred cCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 853 EGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. ........... . ......++.++.+++.+||+.+|++|||+.|+++.
T Consensus 245 ~-----~~~~~~~~~~~---------~------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 V-----EELFKLLKEGH---------R------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred H-----HHHHHHHHcCC---------c------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1 11111100000 0 00011345678899999999999999999999999
Q ss_pred HHHHHHHh
Q 043900 933 LQSIKNIL 940 (953)
Q Consensus 933 L~~i~~~~ 940 (953)
|+++....
T Consensus 293 l~~~~~~~ 300 (304)
T cd05101 293 LDRILTLT 300 (304)
T ss_pred HHHHHHhh
Confidence 99987653
No 147
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.2e-36 Score=337.50 Aligned_cols=254 Identities=20% Similarity=0.232 Sum_probs=198.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.++|++.+.||+|+||.||+|+...+++.||+|+++.. .......+.+|+.+++.++||||+++++++ .++.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~~ 116 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDDK 116 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCC
Confidence 45799999999999999999999998889999999632 223345578899999999999999999885 3457
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~-----------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~k 182 (370)
T cd05596 117 YLYMVMEYMPGGDLVNLMSN-----------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 182 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEE
Confidence 89999999999999999852 2477888899999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS----EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
|+|||.+........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ...
T Consensus 183 L~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~ 256 (370)
T cd05596 183 LADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTY 256 (370)
T ss_pred EEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----HHH
Confidence 999999986643221 122345699999999987653 4789999999999999999999999752211 011
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCC--CCCHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGD--RMNMTNVVRQ 932 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 932 (953)
.. +.+.... ...+.....+.++.+++.+|++.+|++ |||++|+++.
T Consensus 257 ~~--------i~~~~~~----------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 257 SK--------IMDHKNS----------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HH--------HHcCCCc----------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 10 1000000 000000123456889999999999988 9999999763
No 148
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-35 Score=315.61 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=193.9
Q ss_pred cccccceeeEEEEEEc--CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEee
Q 043900 638 EIGVGSFGSVYKGILD--QGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEF 714 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 714 (953)
.||+|+||.||+|.+. +++..||+|++.... ....+.+.+|+.++++++||||++++++|. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 4899999999999875 444579999987543 233467889999999999999999999863 2467999999
Q ss_pred ccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccce
Q 043900 715 MQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLAR 794 (953)
Q Consensus 715 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 794 (953)
+++++|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 76 ~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 143 (257)
T cd05115 76 ASGGPLNKFLSGK---------KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSK 143 (257)
T ss_pred CCCCCHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccc
Confidence 9999999998532 23589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 795 FLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 795 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
......... ......++..|+|||++.+..++.++|||||||++||+++ |..||......+ ......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~--------- 212 (257)
T cd05115 144 ALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIE--------- 212 (257)
T ss_pred cccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHH---------
Confidence 654322211 1112224578999999988889999999999999999996 999987532211 111110
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
..... ..+..+++++.+++.+||+.||++||++.+|.+.|+.+
T Consensus 213 ---~~~~~------------------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 213 ---QGKRL------------------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---CCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 00000 00113456788999999999999999999999998864
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.3e-36 Score=324.92 Aligned_cols=250 Identities=19% Similarity=0.266 Sum_probs=201.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..........+.+|+.+++.++|||++++++++.. +...++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEEE
Confidence 578899999999999999999988888999999976555556778899999999999999999998643 468999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 v~e~~~~~~L~~~~~~-----------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred eecccCCCCHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECcc
Confidence 9999999999999842 2478889999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|.+....... .......+++.|+|||.+.+..++.++|||||||++|||++|+.||....... .+.... ....
T Consensus 161 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~~~-~~~~ 233 (296)
T cd06654 161 GFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLIA-TNGT 233 (296)
T ss_pred ccchhccccc--cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHHHh-cCCC
Confidence 9987653221 11223458899999999998889999999999999999999999996432111 000000 0000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+.. ......+..+.+++.+||..||++|||+.|+++
T Consensus 234 -----~~~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 234 -----PEL--------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -----CCC--------------------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000 001123456889999999999999999999987
No 150
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.8e-36 Score=330.82 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=192.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|..++.++ +||||+++++++. .....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-----cCCEEEEEE
Confidence 4699999999999999998899999999743 233445678899999988 7999999999854 447889999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~~~~----------~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 142 (329)
T cd05588 76 EFVSGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcc
Confidence 99999999988842 23689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCC---ccHHHHHHhhCCch
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGD---MNLHNFARMALPDH 869 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~---~~~~~~~~~~~~~~ 869 (953)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ .....+.....
T Consensus 143 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~--- 217 (329)
T cd05588 143 CKEGIRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI--- 217 (329)
T ss_pred ccccccC--CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH---
Confidence 9743211 112233568999999999999999999999999999999999999996421111 11111111000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC------HHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN------MTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~ 931 (953)
..... ..+..++.++.+++.+|++.||++||+ ++|+++
T Consensus 218 ----~~~~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 218 ----LEKQI--------------------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ----HcCCC--------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 00000 000123456889999999999999998 566653
No 151
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.1e-38 Score=338.22 Aligned_cols=366 Identities=29% Similarity=0.473 Sum_probs=251.1
Q ss_pred CCCcEEeCCCCccc-cccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEe
Q 043900 52 QRLQVLALNNNSIG-GEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLF 130 (953)
Q Consensus 52 ~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 130 (953)
+-.+-.|+++|.++ +..|.....++.++.|.|...++. .+|++++.|.+|++|.+++|++. .+-+.++.|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 34445555666555 456666666666666666666666 77888888888888888888877 6667778888888888
Q ss_pred ccccccc-ccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccccccccccccccccccEEEeeCccc
Q 043900 131 LTDNNLD-GGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQL 209 (953)
Q Consensus 131 L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 209 (953)
+.+|+++ .-+|..+-.|..|+.|+|++|+++ ..|..+.+-.++-.|+||+|+|. .+|..++.++..|-+|+|++|++
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchh
Confidence 8888874 345666777888888888888887 77888888888888888888888 78888888888899999999998
Q ss_pred cCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCcccccccccccccccEEeccCCccc-c
Q 043900 210 TGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFG-G 288 (953)
Q Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~-~ 288 (953)
. .+|.-+..+.+|++|+|++|.+.-- -+..++.++.|..|.+++.+-+ .
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hf-----------------------------QLrQLPsmtsL~vLhms~TqRTl~ 212 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHF-----------------------------QLRQLPSMTSLSVLHMSNTQRTLD 212 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHH-----------------------------HHhcCccchhhhhhhcccccchhh
Confidence 8 6777788888999999999887621 1222333333333333332221 2
Q ss_pred cCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCC
Q 043900 289 LLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIG 368 (953)
Q Consensus 289 ~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 368 (953)
-+|.++..+ .+|..+||+.|.+. ..|+++.++.+|+.|+||+|+|+ .+....+...+|++|+||+|+++
T Consensus 213 N~Ptsld~l-~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-------- 281 (1255)
T KOG0444|consen 213 NIPTSLDDL-HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-------- 281 (1255)
T ss_pred cCCCchhhh-hhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc--------
Confidence 234444443 34444445554444 44444444444555555555444 23333344444444444444444
Q ss_pred CceeeEEEccCCcCCCCCCccCCCCCCCcEEEcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCcccee
Q 043900 369 NLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVL 448 (953)
Q Consensus 369 ~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L 448 (953)
.+|++++.+++|+.|++.+|+++ +. -+|+.++.|.+|+.+
T Consensus 282 ----------------~LP~avcKL~kL~kLy~n~NkL~-----------------------Fe-GiPSGIGKL~~Levf 321 (1255)
T KOG0444|consen 282 ----------------VLPDAVCKLTKLTKLYANNNKLT-----------------------FE-GIPSGIGKLIQLEVF 321 (1255)
T ss_pred ----------------cchHHHhhhHHHHHHHhccCccc-----------------------cc-CCccchhhhhhhHHH
Confidence 57777777777777777777765 11 367788888888888
Q ss_pred eecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCccc
Q 043900 449 DVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNLS 504 (953)
Q Consensus 449 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (953)
..++|.+. .+|+.++.|..|+.|.|++|++- .+|+++.-|+.|++|||..|.=-
T Consensus 322 ~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 322 HAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred Hhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 88888887 78888888888888888888887 68888888888888888888644
No 152
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-36 Score=325.90 Aligned_cols=272 Identities=23% Similarity=0.379 Sum_probs=207.0
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC-------CeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG-------KTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 700 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 700 (953)
.++|.+.+.||+|+||.||+|.+... ...||+|.++.. .......+.+|+++++++ +||||++++++|.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-- 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--
Confidence 35799999999999999999987432 246999999743 233456788899999999 7999999999964
Q ss_pred ccCCCCceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCC
Q 043900 701 DYQGNDFKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKP 774 (953)
Q Consensus 701 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 774 (953)
..+..++||||+++|+|.+++........ .......+++.+++.++.|++.||+|||+. +++||||||
T Consensus 95 ---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 95 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 33678999999999999999975432110 001223589999999999999999999998 999999999
Q ss_pred CCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCccc
Q 043900 775 SNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFE 853 (953)
Q Consensus 775 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~ 853 (953)
+||+++.++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~- 247 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP- 247 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-
Confidence 999999999999999999976543221111222234578999999999899999999999999999998 888885421
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
....... +.... +...+..++.++.+++.+||..+|++|||+.||++.|
T Consensus 248 ----~~~~~~~---------~~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 248 ----VEELFKL---------LKEGH------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred ----HHHHHHH---------HHcCC------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 1111110 00000 0001113345788999999999999999999999999
Q ss_pred HHHHHHhc
Q 043900 934 QSIKNILL 941 (953)
Q Consensus 934 ~~i~~~~~ 941 (953)
+++.....
T Consensus 297 ~~~~~~~~ 304 (307)
T cd05098 297 DRILALTS 304 (307)
T ss_pred HHHHHHhh
Confidence 99887643
No 153
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-36 Score=330.67 Aligned_cols=243 Identities=22% Similarity=0.286 Sum_probs=188.7
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++.++ +||||+++++++. .....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEEEE
Confidence 4699999999999999999889999999743 233445677888888777 7999999999854 347899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~~~L~~~~~~----------~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~ 142 (329)
T cd05618 76 EYVNGGDLMFHMQR----------QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 142 (329)
T ss_pred eCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 99999999988742 23588999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCC---ccHHHHHHhhCCch
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGD---MNLHNFARMALPDH 869 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~---~~~~~~~~~~~~~~ 869 (953)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+........
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 220 (329)
T cd05618 143 CKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred cccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC
Confidence 97532211 12233568999999999999999999999999999999999999996422111 11111111100000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
.. ..+...+.++.+++.+||+.||++||++
T Consensus 221 -------~~--------------------~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 -------QI--------------------RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -------CC--------------------CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 00 0001234568899999999999999984
No 154
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-36 Score=336.18 Aligned_cols=253 Identities=19% Similarity=0.197 Sum_probs=198.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|.+.+.||+|+||+||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||+|+++++++. +.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-----~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-----DKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCe
Confidence 46889999999999999999999888999999997432 234567889999999999999999998853 4477
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~---------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL 143 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE---------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKL 143 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEe
Confidence 999999999999999996321 3588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccC------CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL------GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
+|||++......... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..
T Consensus 144 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~ 217 (330)
T cd05601 144 ADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KT 217 (330)
T ss_pred ccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HH
Confidence 999999876433221 223346899999999986 456789999999999999999999999642211 11
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........ . .. . .......+.++.+++..|++ +|++|||++++++
T Consensus 218 ~~~i~~~~--~----~~-~-----------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 218 YNNIMNFQ--R----FL-K-----------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHcCC--C----cc-C-----------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11000000 0 00 0 00001234568899999997 9999999999885
No 155
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.5e-36 Score=334.58 Aligned_cols=283 Identities=20% Similarity=0.195 Sum_probs=202.3
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQG 704 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 704 (953)
...++|++.+.||+|+||.||+|.+...++.||+|++... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4567899999999999999999999888889999998642 2334567889999999999999999999875321 223
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+++ ++.+++. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~------------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~ 157 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 157 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCC
Confidence 3467999999965 6666663 2478889999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||......+ .+......
T Consensus 158 ~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~ 233 (355)
T cd07874 158 LKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQ 233 (355)
T ss_pred EEEeeCcccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 999999999865322 12233468999999999999999999999999999999999999997532111 11111110
Q ss_pred hC----------CchhhhhccccccCCchhhhhcccch--hhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 AL----------PDHVVDIVDSTLLSDDEDLAVHGNQR--QRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.. ........+.... ........... ..............++.+++.+|++.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 234 LGTPCPEFMKKLQPTVRNYVENRPK--YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hCCCCHHHHHhhcHHHHHHHhcCCc--cccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0000111100000 00000000000 0000000111234568899999999999999999999984
No 156
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-35 Score=315.56 Aligned_cols=251 Identities=23% Similarity=0.313 Sum_probs=202.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|.+.+.||+|++|.||+|+...+++.||+|.+... .......+.+|++++++++|||++++++++. .++..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 477889999999999999999988889999998632 3445678889999999999999999999854 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~d 144 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQR--------GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGD 144 (256)
T ss_pred EEEEeCCCCcHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcc
Confidence 9999999999999996432 23688999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.++....... ......|++.|+|||+..+..++.++|||||||++|||++|+.||...... .........
T Consensus 145 f~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~- 216 (256)
T cd08529 145 LGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----ALILKIIRG- 216 (256)
T ss_pred cccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcC-
Confidence 999987643221 122345888999999999999999999999999999999999999743211 111100000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... ......+.++.+++.+||+.+|++||++.|+++.
T Consensus 217 -------~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 217 -------VFP-------------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -------CCC-------------------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000 0001234568999999999999999999999863
No 157
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9e-36 Score=318.99 Aligned_cols=257 Identities=24% Similarity=0.413 Sum_probs=201.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe---EEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT---TVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.+|++.+.||+|+||.||+|+...+++ .||+|+++.. .......+..|+.++++++||||+++++++. .+.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-----CCC
Confidence 357889999999999999999876543 5999998754 3445678999999999999999999999853 446
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~k 146 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQN---------DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCK 146 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhC---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEE
Confidence 789999999999999998532 23588999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCccccccc---ccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDA---KGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~ 862 (953)
|+|||.+............... ..+..|+|||++.+..++.++|||||||++||+++ |..||...... ......
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i 224 (269)
T cd05065 147 VSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAI 224 (269)
T ss_pred ECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHH
Confidence 9999999866433221111111 12457999999999999999999999999999887 99998653211 111111
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.... +.....+++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 225 ~~~~------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 225 EQDY------------------------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HcCC------------------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 0000113456688999999999999999999999998765
No 158
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.3e-36 Score=328.13 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=189.4
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++... .........|..++... +||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 46999999999999999988899999997431 23345567788888764 8999999999854 347799999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ey~~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05619 76 EYLNGGDLMFHIQS----------CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGM 142 (316)
T ss_pred eCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCc
Confidence 99999999999852 23578899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.....
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~------- 211 (316)
T cd05619 143 CKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD------- 211 (316)
T ss_pred ceECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC-------
Confidence 97542211 1223346899999999999999999999999999999999999999752111 010000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT-NVVR 931 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 931 (953)
.... +.....++.+++.+||+.||++||++. ++.+
T Consensus 212 --~~~~----------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 212 --NPCY----------------------PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --CCCC----------------------CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 0000 001234578999999999999999997 5543
No 159
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.1e-36 Score=317.48 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=197.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.+.||+|+||.||+|.+.+.. .||+|.++... .....+.+|+.++++++||||++++++|.. ....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~-~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQY-DVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCC-cEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEE
Confidence 46888999999999999999887654 69999887432 234678999999999999999999999643 356899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 77 v~e~~~~~~l~~~i~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~ 144 (256)
T cd05113 77 VTEYMSNGCLLNYLREH---------GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCC
Confidence 99999999999998532 12588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++....... .......++..|+|||+..+..++.++|||||||++|||++ |..||......+ ...... ...
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~---~~~ 218 (256)
T cd05113 145 GLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVS---QGL 218 (256)
T ss_pred ccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHh---cCC
Confidence 99986543221 12222335678999999988889999999999999999999 999986422110 000000 000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
... .....+..+.+++.+||+.+|++|||+.++++.++
T Consensus 219 --------~~~-------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 219 --------RLY-------------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --------CCC-------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000 00012456899999999999999999999998763
No 160
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.5e-35 Score=321.80 Aligned_cols=271 Identities=18% Similarity=0.309 Sum_probs=202.6
Q ss_pred cCCcccCcccccceeeEEEEEEcC----------------CCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ----------------GKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKI 693 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~ 693 (953)
++|++.+.||+|+||.||+|.+.. +...||+|+++.. .......+.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468999999999999999986532 3346999999743 33445688999999999999999999
Q ss_pred EeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcc-cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecC
Q 043900 694 LTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKT-EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDL 772 (953)
Q Consensus 694 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 772 (953)
++++.. ++..++||||+++++|.+++......... ......+++.+++.++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCIT-----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEec-----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 998643 36789999999999999999754322111 12234588999999999999999999999 9999999
Q ss_pred CCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh--CCCCCCC
Q 043900 773 KPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT--RKKPVDS 850 (953)
Q Consensus 773 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~pf~~ 850 (953)
||+||+++.++.++|+|||.++.+.............++..|+|||+..++.++.++|||||||++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999986543322222222335678999999888899999999999999999998 7788764
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
....+ .... ............ .......++..+.+++.+||+.||++||++.||+
T Consensus 237 ~~~~~-----~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 237 LSDEQ-----VIEN-----TGEFFRDQGRQV---------------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred cChHH-----HHHH-----HHHHHhhccccc---------------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 32211 1000 000000000000 0000112446789999999999999999999999
Q ss_pred HHHH
Q 043900 931 RQLQ 934 (953)
Q Consensus 931 ~~L~ 934 (953)
+.|+
T Consensus 292 ~~l~ 295 (296)
T cd05095 292 ATLL 295 (296)
T ss_pred HHHh
Confidence 9886
No 161
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.4e-36 Score=329.76 Aligned_cols=242 Identities=21% Similarity=0.255 Sum_probs=191.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 707 (953)
+|.+.+.||+|+||.||+|.+..+++.||+|+++... ......+..|..++..+ +|++|+++++++. ..+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-----TMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-----cCCE
Confidence 4788999999999999999999988899999997432 22344567788888777 5899999988853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL 142 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ----------VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEE
Confidence 9999999999999988852 23578899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......
T Consensus 143 ~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~~~i-- 213 (323)
T cd05616 143 ADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQSI-- 213 (323)
T ss_pred ccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHHHHH--
Confidence 9999997543211 1223456899999999999999999999999999999999999999753211 111100
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
...... .+...+.++.+++.+|++.||++|+++
T Consensus 214 ------~~~~~~--------------------~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 214 ------MEHNVA--------------------YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ------HhCCCC--------------------CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 000000 000234567899999999999999985
No 162
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.9e-36 Score=320.11 Aligned_cols=254 Identities=21% Similarity=0.290 Sum_probs=199.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++. ..+..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEE
Confidence 347888899999999999999999888899999998665555667889999999999999999999853 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.. ...+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|
T Consensus 83 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~d 149 (267)
T cd06645 83 ICMEFCGGGSLQDIYHV----------TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLAD 149 (267)
T ss_pred EEEeccCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECc
Confidence 99999999999999852 23588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||.+...... ........|+..|+|||++. ...++.++||||+||++|||++|..||......... ........
T Consensus 150 fg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~~~~~ 226 (267)
T cd06645 150 FGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMTKSNF 226 (267)
T ss_pred ceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-HhhhccCC
Confidence 9999765422 11223346899999999874 456889999999999999999999998643211100 00000000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. +.. .....++..+.+++.+|++.+|++||+++++++
T Consensus 227 ~~-------~~~--------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 227 QP-------PKL--------------------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CC-------Ccc--------------------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 000 000012345789999999999999999999875
No 163
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.1e-36 Score=335.66 Aligned_cols=255 Identities=19% Similarity=0.231 Sum_probs=196.4
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
..++|++.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ ..+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QDD 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 346799999999999999999999998889999998632 223345678899999999999999999985 345
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~-----------~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~ 181 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHL 181 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCE
Confidence 789999999999999999852 2478888999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS----EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
||+|||+|........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..
T Consensus 182 kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-----~~ 255 (370)
T cd05621 182 KLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-----GT 255 (370)
T ss_pred EEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-----HH
Confidence 9999999987643221 122345699999999998654 3788999999999999999999999742111 01
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCC--CCCHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGD--RMNMTNVVRQ 932 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 932 (953)
.. .+.+..... ..+.....+..+.+++..|++.+|.+ ||+++|+++.
T Consensus 256 ~~--------~i~~~~~~~----------------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 256 YS--------KIMDHKNSL----------------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HH--------HHHhCCccc----------------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11 011000000 00001123456778888999755543 8899998875
No 164
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.1e-35 Score=318.29 Aligned_cols=258 Identities=23% Similarity=0.410 Sum_probs=202.0
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCC---eEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGK---TTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.++|+..+.||+|+||.||+|+...++ ..||+|.++.. .....+.+.+|++++++++|||++++.+++. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence 346788899999999999999986543 36999998644 3344567889999999999999999999964 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..++||||+++++|.++++.. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~ 146 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDH---------DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLEC 146 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcE
Confidence 6789999999999999998532 23588999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccc-cccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 786 HVSDFGLARFLPLSPAQTSS-IDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
||+|||++............ .....+..|+|||++.+..++.++|||||||++||+++ |+.||...... ....
T Consensus 147 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~~~ 221 (268)
T cd05063 147 KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EVMK 221 (268)
T ss_pred EECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHH
Confidence 99999999876433221111 11223567999999988889999999999999999998 99998642211 1111
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
... .... .+....++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 222 ~i~--------~~~~-------------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 222 AIN--------DGFR-------------------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHh--------cCCC-------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 100 0000 000112345689999999999999999999999999875
No 165
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-35 Score=321.21 Aligned_cols=265 Identities=26% Similarity=0.405 Sum_probs=203.6
Q ss_pred hcCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 703 (953)
.++|++.+.||+|+||.||+|.+.. ++..||+|+++... ......+.+|+.++++++|||+++++++|..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~---- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV---- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC----
Confidence 4578999999999999999999753 45689999987433 3345678899999999999999999998643
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCc------------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDK------------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCD 771 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 771 (953)
+...++||||+++|+|.+++........ .......+++.+++.++.|++.||+|||+. +++|||
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 80 -GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred -CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 3678999999999999999964322111 111224588999999999999999999998 999999
Q ss_pred CCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCC
Q 043900 772 LKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDS 850 (953)
Q Consensus 772 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~ 850 (953)
|||+||++++++.++|+|||.+..+..............+..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999976543222222222335678999999998899999999999999999998 8888864
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
.... +........ .... ....++.++.+++.+||+.||++|||+.|++
T Consensus 236 ~~~~-----~~~~~~~~~--------~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 236 MAHE-----EVIYYVRDG--------NVLS-------------------CPDNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred CCHH-----HHHHHHhcC--------CCCC-------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 2211 111110000 0000 0012345789999999999999999999999
Q ss_pred HHHH
Q 043900 931 RQLQ 934 (953)
Q Consensus 931 ~~L~ 934 (953)
+.|+
T Consensus 284 ~~l~ 287 (288)
T cd05050 284 RILQ 287 (288)
T ss_pred HHhh
Confidence 9986
No 166
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.8e-36 Score=329.26 Aligned_cols=242 Identities=23% Similarity=0.250 Sum_probs=190.4
Q ss_pred CcccccceeeEEEEEEc---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 637 NEIGVGSFGSVYKGILD---QGKTTVAVKVFNLLH----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+.||+|+||.||+|+.. ..++.||+|+++... ......+.+|+++++.++||||+++++++. .++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeEE
Confidence 67999999999999874 456789999997422 223456778999999999999999998853 346799
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 143 (323)
T cd05584 77 LILEYLSGGELFMHLER----------EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTD 143 (323)
T ss_pred EEEeCCCCchHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEee
Confidence 99999999999999852 23577888899999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 144 fg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~--- 213 (323)
T cd05584 144 FGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKIL--- 213 (323)
T ss_pred CcCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHH---
Confidence 99997543221 1222346899999999999989999999999999999999999999752111 1111110
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.... ..+...++++.+++.+||+.||++|| +++++++
T Consensus 214 -----~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 214 -----KGKL--------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -----cCCC--------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0000 00012245688999999999999999 7888766
No 167
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.2e-36 Score=328.92 Aligned_cols=242 Identities=22% Similarity=0.266 Sum_probs=192.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|.+..+++.||+|+++.. .......+..|.++++.+ +||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 4699999999999999988889999999743 233456677888888888 7999999999854 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 142 (318)
T cd05570 76 EYVNGGDLMFHIQR----------SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGM 142 (318)
T ss_pred cCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCC
Confidence 99999999988852 23589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 143 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----~~~~~i~~~~--- 212 (318)
T cd05570 143 CKEGILGG--VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----ELFQSILEDE--- 212 (318)
T ss_pred CeecCcCC--CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----HHHHHHHcCC---
Confidence 97532211 1222345899999999999999999999999999999999999999743211 1111000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH-----HHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM-----TNVVR 931 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 931 (953)
. ..+...+.++.+++.+||+.||++||++ .++++
T Consensus 213 -----~--------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 213 -----V--------------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -----C--------------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0 0001234568899999999999999999 77765
No 168
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-35 Score=323.95 Aligned_cols=273 Identities=22% Similarity=0.364 Sum_probs=207.0
Q ss_pred hcCCcccCcccccceeeEEEEEEc-------CCCeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILD-------QGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 700 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 700 (953)
.++|.+.+.||+|+||.||+|+.. .....||+|.++.. .......+.+|+.+++++ +||||++++++|..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 357889999999999999999863 23456999998743 234456788999999999 69999999998643
Q ss_pred ccCCCCceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCC
Q 043900 701 DYQGNDFKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKP 774 (953)
Q Consensus 701 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 774 (953)
....++||||+++|+|.+++........ .......+++.++..++.|++.||+|||++ |++||||||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 90 ----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 3678999999999999999965332100 011234689999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCccc
Q 043900 775 SNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFE 853 (953)
Q Consensus 775 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~ 853 (953)
+||+++.++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999986643222211222234568999999999899999999999999999999 8888864211
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
. ........... ......++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 243 ~-----~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 243 E-----ELFKLLREGHR---------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred H-----HHHHHHHcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 11110000000 000112345688999999999999999999999999
Q ss_pred HHHHHHhcc
Q 043900 934 QSIKNILLG 942 (953)
Q Consensus 934 ~~i~~~~~~ 942 (953)
+++......
T Consensus 291 ~~~~~~~~~ 299 (314)
T cd05099 291 DKVLAAVSE 299 (314)
T ss_pred HHHHHHhcC
Confidence 998765433
No 169
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.4e-35 Score=320.58 Aligned_cols=272 Identities=23% Similarity=0.342 Sum_probs=204.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCC----------------eEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeE
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGK----------------TTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVK 692 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 692 (953)
.++|++.+.||+|+||.||+|++...+ ..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357899999999999999999876532 468999987433 345678899999999999999999
Q ss_pred EEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcc-cCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 043900 693 ILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKT-EEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCD 771 (953)
Q Consensus 693 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 771 (953)
++++|. .++..++||||+++++|.+++......... ......+++..++.++.|++.||+|||+. +++|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999964 337889999999999999999654321111 11233689999999999999999999999 999999
Q ss_pred CCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh--CCCCCC
Q 043900 772 LKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT--RKKPVD 849 (953)
Q Consensus 772 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt--g~~pf~ 849 (953)
|||+||+++.++.++|+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999986543332222334456789999999988899999999999999999998 677775
Q ss_pred CcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 043900 850 SMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNV 929 (953)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 929 (953)
.....+ ................ .......++.++.+++.+||+.||++|||+.||
T Consensus 236 ~~~~~~--~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el 290 (296)
T cd05051 236 HLTDQQ--VIENAGHFFRDDGRQI-----------------------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREI 290 (296)
T ss_pred CcChHH--HHHHHHhccccccccc-----------------------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHH
Confidence 422111 1011100000000000 000011234579999999999999999999999
Q ss_pred HHHHH
Q 043900 930 VRQLQ 934 (953)
Q Consensus 930 l~~L~ 934 (953)
++.|+
T Consensus 291 ~~~L~ 295 (296)
T cd05051 291 HLFLQ 295 (296)
T ss_pred HHHhc
Confidence 99885
No 170
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4e-36 Score=328.57 Aligned_cols=241 Identities=22% Similarity=0.304 Sum_probs=188.9
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++... .........|..++... +||+|+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-----TKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-----eCCEEEEEE
Confidence 46999999999999999988899999997432 23345567788887765 8999999999853 457899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 E~~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~ 142 (316)
T cd05620 76 EFLNGGDLMFHIQD----------KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGM 142 (316)
T ss_pred CCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCC
Confidence 99999999998852 23578899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........
T Consensus 143 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~------- 211 (316)
T cd05620 143 CKENVFG--DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVD------- 211 (316)
T ss_pred CeecccC--CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC-------
Confidence 8753211 11223456899999999999999999999999999999999999999742211 010000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH-HHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT-NVV 930 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl 930 (953)
.... +...+.++.+++.+||+.||++||++. ++.
T Consensus 212 --~~~~----------------------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 212 --TPHY----------------------PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCC----------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0000 001234678999999999999999985 554
No 171
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.2e-36 Score=306.46 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=203.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
+.|+..+.||.|.-|+||+|+.+++...+|+|++.... .....+...|-+||+.++||.++.+|+. ++.+..
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccce
Confidence 35677889999999999999999998999999996432 3345677889999999999999999998 556688
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.|+|||||+||+|....++... +.+++..++-+|.+++-||+|||-. |||.|||||+||||.++|.+.|
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~--------~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIML 220 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPG--------KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIML 220 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCC--------CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEe
Confidence 9999999999999999975443 4799999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCC------------------------------------------------------Ccccccccccccc
Q 043900 788 SDFGLARFLPLSP------------------------------------------------------AQTSSIDAKGSIG 813 (953)
Q Consensus 788 ~DfG~a~~~~~~~------------------------------------------------------~~~~~~~~~gt~~ 813 (953)
+||.++......+ ....+...+||-.
T Consensus 221 sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThE 300 (459)
T KOG0610|consen 221 SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHE 300 (459)
T ss_pred eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccc
Confidence 9999985432100 0011123459999
Q ss_pred cccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchh
Q 043900 814 YIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQ 893 (953)
Q Consensus 814 y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 893 (953)
|.|||++.|...+.++|.|+|||++|||+.|..||.+....+ .+... +.+.+
T Consensus 301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NI------------v~~~l--------------- 352 (459)
T KOG0610|consen 301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNI------------VGQPL--------------- 352 (459)
T ss_pred cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHH------------hcCCC---------------
Confidence 999999999999999999999999999999999998643322 11111 11100
Q ss_pred hhhhhhhHHHHHHHHHHHhhccccCCCCCCCC----HHHHHH
Q 043900 894 RQARINSKIECLVAMVRIGVACSMESPGDRMN----MTNVVR 931 (953)
Q Consensus 894 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl~ 931 (953)
.+....+.+.+..++|++.|.+||.+|.. |.||.+
T Consensus 353 ---~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 353 ---KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ---cCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 11111244567889999999999999988 777654
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.6e-35 Score=318.65 Aligned_cols=250 Identities=24% Similarity=0.305 Sum_probs=197.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|++++++++||||++++++|.. .+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 3678889999999999999999888889999998643 23345678899999999999999999999643 36789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~d 138 (279)
T cd06619 76 ICTEFMDGGSLDVYR--------------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCD 138 (279)
T ss_pred EEEecCCCCChHHhh--------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEee
Confidence 999999999997653 367888999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccH--HHHHHhhCC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNL--HNFARMALP 867 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~--~~~~~~~~~ 867 (953)
||++...... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||.......... .........
T Consensus 139 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (279)
T cd06619 139 FGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD 214 (279)
T ss_pred CCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc
Confidence 9999865322 1223468999999999999999999999999999999999999997533221110 000000000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.. .... .....++++.+++.+||+.+|++||+++|+++.
T Consensus 215 ~~-----~~~~---------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 215 ED-----PPVL---------------------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cC-----CCCC---------------------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00 0000 000223568899999999999999999999874
No 173
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-36 Score=340.16 Aligned_cols=203 Identities=22% Similarity=0.298 Sum_probs=172.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|+...+++.||+|++.... ......+.+|++++++++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999999988999999986322 22346688999999999999999999985 34578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL 142 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR----------LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKL 142 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999853 23578888999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCC-----------------------------------------cccccccccccccccccccCCCCCC
Q 043900 788 SDFGLARFLPLSPA-----------------------------------------QTSSIDAKGSIGYIAPEYGLGSEVS 826 (953)
Q Consensus 788 ~DfG~a~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 826 (953)
+|||+|..+..... ........||+.|+|||++.+..++
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 222 (376)
T cd05598 143 TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT 222 (376)
T ss_pred EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC
Confidence 99999853311000 0001134699999999999999999
Q ss_pred cccchHHHHHHHHHHHhCCCCCCCc
Q 043900 827 INGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 827 ~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
.++|||||||++|||++|+.||...
T Consensus 223 ~~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 223 QLCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred cceeeeeccceeeehhhCCCCCCCC
Confidence 9999999999999999999999753
No 174
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-36 Score=338.46 Aligned_cols=202 Identities=22% Similarity=0.269 Sum_probs=171.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|....+++.||+|++... .....+.+.+|++++++++||||+++++++. ++..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-----DAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCe
Confidence 4689999999999999999999999999999998642 2234567888999999999999999999854 4578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl 142 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK----------YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKL 142 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEE
Confidence 9999999999999999852 23578889999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCc------------c---------------------------------cccccccccccccccccCC
Q 043900 788 SDFGLARFLPLSPAQ------------T---------------------------------SSIDAKGSIGYIAPEYGLG 822 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~ 822 (953)
+|||+++.+...... . ......||+.|+|||++.+
T Consensus 143 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 222 (377)
T cd05629 143 SDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ 222 (377)
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc
Confidence 999999643211000 0 0012459999999999999
Q ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 823 SEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 823 ~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
..++.++|||||||++|||++|..||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 223 QGYGQECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CCCCCceeeEecchhhhhhhcCCCCCCC
Confidence 9999999999999999999999999964
No 175
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.1e-35 Score=314.44 Aligned_cols=253 Identities=27% Similarity=0.459 Sum_probs=199.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.+.||+|+||.||+|....+. .||+|.++.... ..+.+.+|+.++++++|++++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNT-KVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIYI 77 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCc-eeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcEE
Confidence 46889999999999999999887654 799999875333 3467899999999999999999998852 245789
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.++++... ...+++.+++.++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGE--------GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred EEEecCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCc
Confidence 999999999999986322 23588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.+......... ......++..|+|||+..+..++.++||||||+++|||++ |..||......+ .......
T Consensus 147 g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~----- 218 (260)
T cd05070 147 GLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQVER----- 218 (260)
T ss_pred eeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHc-----
Confidence 999876432211 1122335678999999988899999999999999999999 889986422110 1111000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
... .+.+...+.++.+++.+||+.+|++|||+.++.+.|++
T Consensus 219 -------~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 -------GYR------------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------CCC------------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 00011234568999999999999999999999998875
No 176
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-35 Score=330.04 Aligned_cols=284 Identities=19% Similarity=0.228 Sum_probs=201.7
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-c
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-Y 702 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~ 702 (953)
.....++|.+.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.++++++||||+++++++.... .
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3456688999999999999999999998888899999986432 223456778999999999999999998864321 1
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
......++++|++ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK-----------CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED 154 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCC
Confidence 2234578999998 789988874 23589999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....+
T Consensus 155 ~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~ 228 (343)
T cd07878 155 CELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRI 228 (343)
T ss_pred CCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence 99999999999865322 223468999999999877 568899999999999999999999996532111 11111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARIN-SKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... .....+...... ..............+..... ......+.+.+++.+|++.||++|||++|+++.
T Consensus 229 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 229 MEVV-GTPSPEVLKKIS-SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHh-CCCCHHHHHhcc-hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1110 000000000000 00000000000000000000 001123457899999999999999999999864
No 177
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-35 Score=323.30 Aligned_cols=266 Identities=24% Similarity=0.394 Sum_probs=202.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe--EEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT--TVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 706 (953)
++|++.+.||+|+||.||+|.+..++. .+|+|.++.. .......+.+|++++.++ +||||+++++++. .++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CCC
Confidence 468888999999999999999876553 4677776532 334456788999999999 8999999999964 346
Q ss_pred ceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
..++||||+++++|.++++....... .......+++.+++.++.|++.|++|||+. |++||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~ 158 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 158 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEec
Confidence 78999999999999999965432110 011234689999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHH
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~ 859 (953)
+++.+||+|||++..... ........++..|+|||++.+..++.++|||||||++|||+| |..||......
T Consensus 159 ~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----- 230 (303)
T cd05088 159 ENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----- 230 (303)
T ss_pred CCCcEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----
Confidence 999999999999864321 111111234678999999988889999999999999999998 99998642211
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
...... +.. . +.......+.++.+++.+||+.+|++||+++++++.++.+...
T Consensus 231 ~~~~~~-~~~--------~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 231 ELYEKL-PQG--------Y------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHHHHH-hcC--------C------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111100 000 0 0000012345688999999999999999999999999887544
No 178
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.8e-36 Score=333.25 Aligned_cols=205 Identities=23% Similarity=0.279 Sum_probs=172.4
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQG 704 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 704 (953)
...++|++.+.||+|+||.||+|.+...++.||||++... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3467899999999999999999999988889999998642 2334567889999999999999999999864321 223
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+++ ++.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 164 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHH------------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCc
Confidence 3568999999965 6766663 2477888999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
+||+|||+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 ~kL~DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 165 LKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred EEEEeCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999865322 1223346899999999999999999999999999999999999999753
No 179
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.1e-35 Score=318.75 Aligned_cols=272 Identities=25% Similarity=0.362 Sum_probs=202.2
Q ss_pred CCcccCcccccceeeEEEEEE----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGIL----DQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.|++.+.||+|+||.||+|.+ ..++..||+|.++... ......+.+|++++++++|||++++.+++.. .+..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCCC
Confidence 478889999999999999985 3456789999987443 3345678999999999999999999998743 2235
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++... ...+++.++..++.|++.||+|||+. |++||||||+||+++.++.+|
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~---------~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~ 149 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN---------KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 149 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEE
Confidence 689999999999999998522 12589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.++........ .......++..|+|||++.+..++.++|||||||++|||+|++.|+....... .......
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~~~~ 226 (284)
T cd05079 150 IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMIGPT 226 (284)
T ss_pred ECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhcccc
Confidence 9999999876432221 11123446778999999988899999999999999999999887654321100 0000000
Q ss_pred CCch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 866 LPDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 866 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
..+. ........ . ...+.+....++.++.+++.+||+.+|++|||++++++.++++
T Consensus 227 ~~~~~~~~~~~~~---------~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 227 HGQMTVTRLVRVL---------E------EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccccHHHHHHHH---------H------cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 00000000 0 0000011113456799999999999999999999999999875
No 180
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.9e-36 Score=329.47 Aligned_cols=252 Identities=22% Similarity=0.238 Sum_probs=194.2
Q ss_pred CCcccCcccccceeeEEEEEEc---CCCeEEEEEEeecc----chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 632 GFASANEIGVGSFGSVYKGILD---QGKTTVAVKVFNLL----HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
+|++.+.||+|+||.||+|+.. .+++.||+|+++.. .....+.+.+|+.+++++ +||+|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4888999999999999999874 45678999999632 223345678899999999 599999999884 3
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.++..++||||+++|+|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQ----------RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEG 142 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCC
Confidence 45778999999999999999852 23588999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
.+||+|||+++.+..... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||....... ......
T Consensus 143 ~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~ 220 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVS 220 (332)
T ss_pred CEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHH
Confidence 999999999986532222 122235699999999998875 47889999999999999999999996432211 111111
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
...... +... +...+..+.+++.+||+.||++|| +++++++
T Consensus 221 ~~~~~~------~~~~----------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 221 RRILKC------DPPF----------------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHhcC------CCCC----------------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 110000 0000 012345688999999999999999 6777765
No 181
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-35 Score=316.95 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=189.7
Q ss_pred CcccccceeeEEEEEEcC--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|.+.+ +...+|+|.++... ......+.+|+.++++++||||+++++++.+ ....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-----VTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCCcEEEEE
Confidence 368999999999998754 34579999886443 2334578889999999999999999998643 366899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 ~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-----ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred CCCCCcHHHHHHHhhhc-----ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccc
Confidence 99999999999643221 123467788889999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcccccccccccccccccccCCC-------CCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-------EVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
+...............++..|+|||++.+. .++.++||||||+++|||++ |+.||......+. ... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~---~ 222 (269)
T cd05087 148 HNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTY---T 222 (269)
T ss_pred ccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHH---H
Confidence 754332222222334578889999987642 35789999999999999996 9999965322111 000 0
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
.........++... ...++++.+++.+|| .+|++|||++||++.|+
T Consensus 223 ~~~~~~~~~~~~~~----------------------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 VREQQLKLPKPRLK----------------------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hhcccCCCCCCccC----------------------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000010000 012345788999999 68999999999998874
No 182
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.8e-35 Score=316.81 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=203.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCC---CeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
++|.+.+.||+|+||.||+|.+.+. ...||+|...... ....+.+.+|+.++++++||||++++++|.. .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4578889999999999999997543 4469999987544 4456688999999999999999999998642 4
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVN---------KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeE
Confidence 568999999999999999532 12489999999999999999999998 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||+++........ ......++..|+|||.+.+..++.++||||||+++||+++ |..||......+. .......
T Consensus 148 l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--~~~~~~~ 224 (270)
T cd05056 148 LGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--IGRIENG 224 (270)
T ss_pred EccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHcC
Confidence 9999999876433211 1122335568999999988889999999999999999996 9999975322110 0000000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
. +......++.++.+++.+|+..+|++|||+.++++.|+++++.
T Consensus 225 --~----------------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 225 --E----------------------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --C----------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 0000113456789999999999999999999999999998753
No 183
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.7e-35 Score=314.51 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=193.7
Q ss_pred cccccceeeEEEEEE--cCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 638 EIGVGSFGSVYKGIL--DQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+.+++.++||||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 589999999999976 3456789999986432 334567899999999999999999999863 245789999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+
T Consensus 76 ~~~~~~L~~~l~~----------~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~ 142 (257)
T cd05116 76 LAELGPLNKFLQK----------NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLS 142 (257)
T ss_pred cCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccc
Confidence 9999999999852 23588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 794 RFLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 794 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
+......... ......++..|+|||.+....++.++|||||||++|||++ |..||...... ...+....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~------- 213 (257)
T cd05116 143 KALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIES------- 213 (257)
T ss_pred cccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHC-------
Confidence 8764332211 1122234678999999988889999999999999999998 99999753211 11111110
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.... ..+..+++++.+++.+||+.||++||++++|.+.|++
T Consensus 214 -----~~~~------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 214 -----GERM------------------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -----CCCC------------------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 0000 0001245678899999999999999999999999875
No 184
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1e-35 Score=319.21 Aligned_cols=258 Identities=22% Similarity=0.274 Sum_probs=200.9
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC-CCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ-GND 706 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~-~~~ 706 (953)
+++.|++.+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +|||+++++++|...... ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5667889999999999999999999988999999997543 3346788899999998 799999999997643221 134
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--------~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTK--------GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEE
Confidence 6899999999999999986422 23588999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
|+|||++...... ........|+..|+|||++. +..++.++|||||||++|||++|+.||....... ..
T Consensus 152 l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~ 225 (272)
T cd06637 152 LVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----AL 225 (272)
T ss_pred EccCCCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HH
Confidence 9999999865322 12223456899999999976 3468889999999999999999999986422110 00
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ..... .... ....++.++.+++.+||..||.+|||+.|+++
T Consensus 226 ~~-~~~~~-----~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 226 FL-IPRNP-----APRL---------------------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HH-HhcCC-----CCCC---------------------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 00000 0000 00023456889999999999999999999975
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-35 Score=314.89 Aligned_cols=251 Identities=19% Similarity=0.229 Sum_probs=200.6
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
+|++.+.||+|+||.||++.+..+++.||+|.++.. .....+.+.+|+.+++.++|||++++.+++. ..+..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEE
Confidence 478889999999999999999988889999998642 3345567889999999999999999999853 4478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||++++++.++++||
T Consensus 76 v~e~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQR--------GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred EEeeCCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEccc
Confidence 999999999999885322 23578899999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|..||..... ............
T Consensus 145 g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~ 217 (255)
T cd08219 145 GSARLLTSPG--AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSY 217 (255)
T ss_pred Ccceeecccc--cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCC
Confidence 9998664321 122234588999999999998999999999999999999999999974211 111111000000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. . .+...+..+.+++.+||+.||++|||+.|++.+
T Consensus 218 ~--------~-------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 K--------P-------------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred C--------C-------------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 0 001234468899999999999999999999865
No 186
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-35 Score=315.27 Aligned_cols=251 Identities=27% Similarity=0.375 Sum_probs=196.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|++.+.||+|+||.||+|.++.+ ..+|+|++.... .....+.+|++++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~-~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGK-IDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCC-ccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 3578899999999999999998754 479999986432 23456888999999999999999999854 3467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 77 v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~df 144 (256)
T cd05059 77 VTEYMANGCLLNYLRERK---------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDF 144 (256)
T ss_pred EEecCCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCc
Confidence 999999999999985321 2588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++........ ......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ .........
T Consensus 145 g~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~--- 218 (256)
T cd05059 145 GLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSAGY--- 218 (256)
T ss_pred ccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHcCC---
Confidence 999865422111 1112224568999999999999999999999999999999 899986422111 100000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
. ...+..++.++.+++.+||..+|++|||+.|+++.|
T Consensus 219 -----~----------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 -----R----------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -----c----------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0 000012355799999999999999999999999876
No 187
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.9e-35 Score=312.74 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=196.3
Q ss_pred CcccccceeeEEEEEEcCCC---eEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGK---TTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
++||+|+||.||+|.+.... ..||+|.++.... ...+.+.+|+.+++++.|||++++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999876544 6899999874433 34567889999999999999999999853 24579999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.
T Consensus 75 e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~ 141 (257)
T cd05060 75 ELAPLGPLLKYLKKR----------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGM 141 (257)
T ss_pred EeCCCCcHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccc
Confidence 999999999999532 2578999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 793 ARFLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 793 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
++......... ......++..|+|||...+..++.++|||||||++||+++ |..||..... ...........+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~--- 216 (257)
T cd05060 142 SRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER--- 216 (257)
T ss_pred cceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc---
Confidence 98764332211 1112224568999999999999999999999999999998 9999865321 111111111000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
...+..++.++.+++.+||+.+|++||++.++++.|+++
T Consensus 217 ---------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 ---------------------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 000112345788999999999999999999999999876
No 188
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.5e-36 Score=352.16 Aligned_cols=262 Identities=18% Similarity=0.254 Sum_probs=201.4
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 703 (953)
.....++|.+.+.||+|+||+||+|.+..++..||+|++... .......+..|+.++++++||||++++++|.. .
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---K 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---c
Confidence 334557899999999999999999999999999999998643 33445678999999999999999999998643 2
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCC----CCCeEeecCCCCCeEe
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDC----QPPITHCDLKPSNVLL 779 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~ivH~Dlkp~NIll 779 (953)
.....++||||+++|+|.+++..... ....+++..++.|+.||+.||+|||+.. ..+||||||||+|||+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~------~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYK------MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhh------ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 34578999999999999999964321 1236899999999999999999999852 1259999999999999
Q ss_pred cC-----------------CCcEEEeccccceecCCCCCcccccccccccccccccccCC--CCCCcccchHHHHHHHHH
Q 043900 780 DE-----------------EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLE 840 (953)
Q Consensus 780 ~~-----------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slG~vl~e 840 (953)
+. .+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 64 2359999999998653221 2233468999999999854 458899999999999999
Q ss_pred HHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 043900 841 LVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESP 920 (953)
Q Consensus 841 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 920 (953)
|+||..||..... ............ .+. ....+.++.+++..||+.+|
T Consensus 236 LLTGk~PF~~~~~----~~qli~~lk~~p-------~lp---------------------i~~~S~eL~dLI~~~L~~dP 283 (1021)
T PTZ00266 236 LCSGKTPFHKANN----FSQLISELKRGP-------DLP---------------------IKGKSKELNILIKNLLNLSA 283 (1021)
T ss_pred HHHCCCCCCcCCc----HHHHHHHHhcCC-------CCC---------------------cCCCCHHHHHHHHHHhcCCh
Confidence 9999999964211 111111100000 000 00123568899999999999
Q ss_pred CCCCCHHHHHH
Q 043900 921 GDRMNMTNVVR 931 (953)
Q Consensus 921 ~~RPt~~evl~ 931 (953)
.+||++.|++.
T Consensus 284 eeRPSa~QlL~ 294 (1021)
T PTZ00266 284 KERPSALQCLG 294 (1021)
T ss_pred hHCcCHHHHhc
Confidence 99999999984
No 189
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.3e-35 Score=313.26 Aligned_cols=250 Identities=28% Similarity=0.378 Sum_probs=197.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|.+.+.||+|+||.||+|...+ +.||+|.++... ..+.+.+|+.++++++|++++++++++. ..+...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcC--CcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEE
Confidence 468889999999999999998764 469999986432 3467889999999999999999998753 33466899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.++++... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 78 v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRG--------RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred EEECCCCCcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCC
Confidence 999999999999986432 12578999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|++....... ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ........
T Consensus 147 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~---- 212 (256)
T cd05082 147 GLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRV---- 212 (256)
T ss_pred ccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH----
Confidence 9998643221 12235678999999998899999999999999999998 999986421 11111110
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
....... ....+++.+.+++.+||+.+|++|||+.++++.|+++
T Consensus 213 -----~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 213 -----EKGYKMD------------------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----hcCCCCC------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0000000 0013356788999999999999999999999998764
No 190
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-35 Score=314.54 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=199.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
++|.+.+.||+|++|.||+|....+++.||+|.++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-----DD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-----cC
Confidence 56899999999999999999998888899999986432 123456888999999999999999999964 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~ 143 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA----------YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNV 143 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 689999999999999998852 23578889999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCccc-ccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTS-SIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|||.++.......... .....++..|+|||++.+..++.++||||+|+++||+++|+.||...... ......
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~ 219 (263)
T cd06625 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKI 219 (263)
T ss_pred EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHH
Confidence 9999999986543211111 12345788999999999999999999999999999999999998642111 100000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
...... ...+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 220 ~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 220 ATQPTN---------------------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred hccCCC---------------------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000 00011234568899999999999999999999864
No 191
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=356.15 Aligned_cols=484 Identities=27% Similarity=0.348 Sum_probs=405.2
Q ss_pred eeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccc
Q 043900 32 VLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNN 111 (953)
Q Consensus 32 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 111 (953)
.+|++.++++- +|..+..-..++.|++++|.+-...-+...+...|+.|++++|++. ..|..+..+.+|+.|+++.|-
T Consensus 2 ~vd~s~~~l~~-ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 2 HVDASDEQLEL-IPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred CcccccccCcc-cchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 47889999996 8877777777999999999987332344456667999999999998 899999999999999999999
Q ss_pred cccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccccccccc
Q 043900 112 LTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLD 191 (953)
Q Consensus 112 l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 191 (953)
|. ..|.+.+++.+|++|.|.+|++. ..|..+..+++|++|+++.|++. .+|..+..++.+..++.++|.-...++.
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~- 155 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ- 155 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc-
Confidence 99 88999999999999999999998 89999999999999999999998 8999999999999999999933323332
Q ss_pred cccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCccccccccc
Q 043900 192 FGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLCSLT 271 (953)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~ 271 (953)
..++.++|..|.+.+.++..+..+.+ .|+|++|.+. .-.+..+..|+.+....|.+...-.
T Consensus 156 -----~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~--~~dls~~~~l~~l~c~rn~ls~l~~---------- 216 (1081)
T KOG0618|consen 156 -----TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME--VLDLSNLANLEVLHCERNQLSELEI---------- 216 (1081)
T ss_pred -----ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh--hhhhhhccchhhhhhhhcccceEEe----------
Confidence 23889999999999999999998888 8999999998 4456677888888888888765322
Q ss_pred ccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCCCCe
Q 043900 272 NSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQNLRE 351 (953)
Q Consensus 272 ~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 351 (953)
..++++.|+.+.|.+....+. ..+.+|+++++++|+++ .+|.+++.+.+|+.|+..+|+++ .+|..+...++|+.
T Consensus 217 ~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~ 291 (1081)
T KOG0618|consen 217 SGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVS 291 (1081)
T ss_pred cCcchheeeeccCcceeeccc---cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHH
Confidence 357889999999999854332 23468999999999998 46699999999999999999996 78999999999999
Q ss_pred EEeccccccCCCCCCCCCc-eeeEEEccCCcCCCCCCcc-CCCCC-CCcEEEcCCCccCCCCCccccCccccceeeeccC
Q 043900 352 LRLQRNKFLGNIPPSIGNL-KVFNLDLSCNFLQGSIPSS-LGQYK-TLTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSR 428 (953)
Q Consensus 352 L~L~~N~l~~~~p~~~~~l-~l~~L~L~~N~l~~~~p~~-~~~l~-~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~ 428 (953)
|.+.+|.++ .+|.....+ .+++|+|..|.|. .+|+. |.-+. +|..|..+.|++. ..|..-......++.|.+.+
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhc
Confidence 999999998 677777766 5799999999998 45553 33333 3788999999998 66643334455677999999
Q ss_pred CcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCcccccCC
Q 043900 429 NQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNLSGKIP 508 (953)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 508 (953)
|.++...-..+.+...|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|..+..++.|++|....|++. ..|
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 9999877778899999999999999999444456788999999999999999 78999999999999999999998 778
Q ss_pred ccccccccCceEeccCCcCcccC-CCCCcccccccccccCCcCC
Q 043900 509 EFLVGFQLLENLNLSNNNLEGMV-PIEGVFKNATITSVLGNLKL 551 (953)
Q Consensus 509 ~~~~~l~~L~~l~l~~N~l~~~~-p~~~~~~~~~~~~~~~n~~l 551 (953)
.+..++.|+.+|+|-|+|+-.. |.....+++....+.||.++
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 7889999999999999997443 22222255666777788754
No 192
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-35 Score=317.26 Aligned_cols=259 Identities=24% Similarity=0.386 Sum_probs=203.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKT----TVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|++.+.||+|+||.||+|.+..+++ .||+|..+... ......+.+|+.++++++|||+++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 568889999999999999999865443 58999886443 3345678899999999999999999999753
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 148 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNH---------KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHV 148 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeE
Confidence 5689999999999999998532 22488999999999999999999998 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||.++...............++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ .......
T Consensus 149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~ 226 (279)
T cd05057 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--IPDLLEK 226 (279)
T ss_pred EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhC
Confidence 9999999987653322222222334678999999988899999999999999999999 999987532111 1111110
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
. . ... .+..++..+.+++.+||..||++||++.++++.|+++.+.
T Consensus 227 ~---~--------~~~-------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 G---E--------RLP-------------------QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred C---C--------CCC-------------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0 0 000 0001234578999999999999999999999999998653
No 193
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.8e-36 Score=322.27 Aligned_cols=270 Identities=22% Similarity=0.294 Sum_probs=207.6
Q ss_pred cCHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 621 ISYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
+.++.+..+.++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++++ +||||++++++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344566667889999999999999999999999888899999986432 2235678899999999 69999999998765
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
.....+...++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +++||||||+||++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili 157 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK------RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILL 157 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhc------cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEE
Confidence 444556789999999999999998753211 123578999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCcccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 780 DEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 780 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
+.++.+||+|||.++...... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~ 235 (286)
T cd06638 158 TTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM 235 (286)
T ss_pred CCCCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence 999999999999998664321 12233458999999998753 45788999999999999999999998643211
Q ss_pred CccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 855 DMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..... . ... ..... ..+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 236 ----~~~~~-~-~~~----~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 236 ----RALFK-I-PRN----PPPTL--------------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ----HHHhh-c-ccc----CCCcc--------------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00000 0 000 00000 0000123468899999999999999999999874
No 194
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5e-36 Score=337.40 Aligned_cols=201 Identities=21% Similarity=0.314 Sum_probs=171.2
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.|++.+.||+|+||+||+|+...+++.||+|++.... ......+.+|++++++++||||+++++++. +++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 5888999999999999999999999999999996432 234567889999999999999999999854 44789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~----------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~ 143 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM----------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLT 143 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEe
Confidence 9999999999999998532 2578888999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCC---------------------------------------------cccccccccccccccccccCCC
Q 043900 789 DFGLARFLPLSPA---------------------------------------------QTSSIDAKGSIGYIAPEYGLGS 823 (953)
Q Consensus 789 DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 823 (953)
|||+++.+..... ........||+.|+|||++.+.
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (382)
T cd05625 144 DFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT 223 (382)
T ss_pred ECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC
Confidence 9999753311000 0001124689999999999999
Q ss_pred CCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 824 EVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 824 ~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
.++.++||||+||++|||++|+.||..
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 224 GYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred CCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 999999999999999999999999975
No 195
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-35 Score=324.23 Aligned_cols=272 Identities=22% Similarity=0.356 Sum_probs=207.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCC-------CeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQG-------KTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 701 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~-------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 701 (953)
.+|.+.+.||+|+||.||+|++... ...||+|.++.. .....+.+.+|+++++++ +||||++++++|..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc--
Confidence 4689999999999999999986432 236899988643 234457889999999999 79999999999643
Q ss_pred cCCCCceeEEEeeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCC
Q 043900 702 YQGNDFKALVFEFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPS 775 (953)
Q Consensus 702 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 775 (953)
....++||||+++|+|.+++........ .......+++.+++.++.|++.||+|||+. +++||||||+
T Consensus 90 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 90 ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 3678999999999999999965322100 011234689999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccC
Q 043900 776 NVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEG 854 (953)
Q Consensus 776 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~ 854 (953)
||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 242 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV- 242 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 99999999999999999987643322222223335678999999999999999999999999999998 8888864211
Q ss_pred CccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 855 DMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
............. .....++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 243 ----~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 243 ----EELFKLLKEGHRM---------------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred ----HHHHHHHHcCCCC---------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1111111000000 000123456889999999999999999999999999
Q ss_pred HHHHHhcc
Q 043900 935 SIKNILLG 942 (953)
Q Consensus 935 ~i~~~~~~ 942 (953)
.+......
T Consensus 292 ~~~~~~~~ 299 (334)
T cd05100 292 RVLTVTST 299 (334)
T ss_pred HHhhhcCC
Confidence 99855433
No 196
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=326.27 Aligned_cols=247 Identities=21% Similarity=0.337 Sum_probs=197.1
Q ss_pred ccCcccccceeeEEEEEEcCCCeEEEEEEee----ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 635 SANEIGVGSFGSVYKGILDQGKTTVAVKVFN----LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~----~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
...+||+|+|-+||+|.+..++..||--.++ ...+...++|..|+++|+.++||||+++++++.+. .+....+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~---~n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT---DNKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---CCceeee
Confidence 3467999999999999999888777644332 23345568999999999999999999999986543 2356789
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec-CCCcEEEec
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD-EEMMAHVSD 789 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~D 789 (953)
|+|.|..|+|+.|.++.+ .++...+..|++||++||.|||++ .|+|+|||||-+||+|+ ..|.|||+|
T Consensus 121 iTEL~TSGtLr~Y~kk~~----------~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHR----------RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred eeecccCCcHHHHHHHhc----------cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecc
Confidence 999999999999997544 577889999999999999999997 78999999999999997 557999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
+|+|+..... ......|||.|||||+.. ..|++.+||||||++++||+|+..||.........+.+......|..
T Consensus 190 LGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 190 LGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA 264 (632)
T ss_pred hhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH
Confidence 9999977433 333467999999999976 78999999999999999999999999754332222222222122222
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...+- .+++.++|.+|+.. ..+|||+.|+++
T Consensus 265 l~kV~------------------------------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 265 LSKVK------------------------------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhccC------------------------------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 22211 24688999999999 999999999986
No 197
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2e-35 Score=319.30 Aligned_cols=273 Identities=25% Similarity=0.373 Sum_probs=206.2
Q ss_pred cCCcccCcccccceeeEEEEEEcC----CCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ----GKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+.|...+.||+|+||.||+|++.. .++.||+|+++..... ..+.+.+|++.++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 357778999999999999999753 3678999999755443 56789999999999999999999998643 234
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~---------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~ 148 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR---------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLV 148 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc---------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCE
Confidence 67899999999999999996322 2589999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|||.+.......... ......++..|+|||...+..++.++||||||+++|||++|+.|+................
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 228 (284)
T cd05038 149 KISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQG 228 (284)
T ss_pred EEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccc
Confidence 999999998765322211 1112335667999999988899999999999999999999999986532221110000000
Q ss_pred -hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 865 -ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 865 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.......+.+... .+......++.++.+++.+||+.+|++||||.||+++|+.+
T Consensus 229 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 229 QMIVTRLLELLKEG------------------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccHHHHHHHHHcC------------------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000000100000 00111123456799999999999999999999999999876
No 198
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-36 Score=336.42 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=167.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
..+|.+.+.||+|+||.||+|.+...++.||||... ...+.+|++++++++|+||+++++++.. ++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEE
Confidence 346999999999999999999999988899999643 2345689999999999999999998643 36789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|||++. ++|.+++... ...+++.+++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 237 lv~e~~~-~~L~~~l~~~---------~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~D 303 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGAR---------LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGD 303 (461)
T ss_pred EEEEccC-CCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcc
Confidence 9999994 6888887422 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVD 849 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~ 849 (953)
||+++...............||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 304 FGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 304 FGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 999987643322222234569999999999999999999999999999999999887654
No 199
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.7e-35 Score=341.15 Aligned_cols=202 Identities=23% Similarity=0.302 Sum_probs=165.1
Q ss_pred HHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCC------CCeeEEEeeec
Q 043900 625 NLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRH------RNLVKILTACS 698 (953)
Q Consensus 625 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~ 698 (953)
++....++|++.+.||+|+||+||+|.+..+++.||||+++... ........|+.+++.++| ++++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445678999999999999999999999888899999996432 223445667777776654 45888888864
Q ss_pred ccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCe
Q 043900 699 GVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNV 777 (953)
Q Consensus 699 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NI 777 (953)
. ...+.|+|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+ . +|+||||||+||
T Consensus 202 ~----~~~~~~iv~~~~-g~~l~~~l~~----------~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NI 263 (467)
T PTZ00284 202 N----ETGHMCIVMPKY-GPCLLDWIMK----------HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENI 263 (467)
T ss_pred c----CCceEEEEEecc-CCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHE
Confidence 2 335789999998 7788888752 2358999999999999999999997 5 999999999999
Q ss_pred EecCCC----------------cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHH
Q 043900 778 LLDEEM----------------MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLEL 841 (953)
Q Consensus 778 ll~~~~----------------~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~el 841 (953)
|++.++ .+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||
T Consensus 264 Ll~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 264 LMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred EEecCCcccccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH
Confidence 998765 49999999886432 122345699999999999999999999999999999999
Q ss_pred HhCCCCCCC
Q 043900 842 VTRKKPVDS 850 (953)
Q Consensus 842 ltg~~pf~~ 850 (953)
++|+.||+.
T Consensus 339 ltG~~pf~~ 347 (467)
T PTZ00284 339 YTGKLLYDT 347 (467)
T ss_pred HhCCCCCCC
Confidence 999999975
No 200
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=321.95 Aligned_cols=252 Identities=24% Similarity=0.271 Sum_probs=207.0
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch---hhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---GAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQG 704 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 704 (953)
....|.+.+.||+|.||.||+++.+.+++.+|+|++..... .....+.+|+.+|+++. ||||+.+.+++ +.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 44578899999999999999999999999999999964333 24568999999999998 99999999995 44
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC---
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE--- 781 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--- 781 (953)
...+++|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+..
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-----------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-----------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDE 173 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-----------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccC
Confidence 57899999999999999999522 289999999999999999999998 9999999999999953
Q ss_pred -CCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHH
Q 043900 782 -EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHN 860 (953)
Q Consensus 782 -~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~ 860 (953)
++.+|++|||+|..... .......+||+.|+|||++.+..|+..+||||+||++|.|++|..||....+..... .
T Consensus 174 ~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~ 249 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-A 249 (382)
T ss_pred CCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-H
Confidence 35799999999998754 334556789999999999999999999999999999999999999998643322111 1
Q ss_pred HHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 861 FARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 861 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.....+ ++- .+.....+....+++..|+..||.+|+|+.++++
T Consensus 250 i~~~~~-----~f~-----------------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 250 ILRGDF-----DFT-----------------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHcCCC-----CCC-----------------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111100 000 0111234567889999999999999999999998
No 201
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-35 Score=326.18 Aligned_cols=244 Identities=22% Similarity=0.283 Sum_probs=189.9
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|....+++.||+|+++.. .....+.+.+|+.++.++ +||+|+++++++. .....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-----TTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-----eCCEEEEEE
Confidence 4699999999999999999889999999743 233456688899999888 6999999999853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (327)
T cd05617 76 EYVNGGDLMFHMQR----------QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGM 142 (327)
T ss_pred eCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccc
Confidence 99999999988842 23589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccC-CccHHHHHHhhCCchhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEG-DMNLHNFARMALPDHVV 871 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 871 (953)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 143 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 217 (327)
T cd05617 143 CKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--- 217 (327)
T ss_pred ceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---
Confidence 97532111 1223356899999999999999999999999999999999999999643221 11111111110000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT 927 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 927 (953)
... ..+...+..+.+++.+||+.||++||++.
T Consensus 218 ----~~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 218 ----KPI--------------------RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ----CCC--------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 000 00012235578999999999999999854
No 202
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.8e-35 Score=313.97 Aligned_cols=253 Identities=26% Similarity=0.417 Sum_probs=192.6
Q ss_pred CcccccceeeEEEEEEcC---CCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQ---GKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|.+.+ ....||+|.+... .....+.+.+|+.+++.++|||+++++++|.. .+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999999753 3457999998533 33446788899999999999999999998642 235678999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.... ...++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||+
T Consensus 77 e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~ 144 (262)
T cd05058 77 PYMKHGDLRNFIRSET---------HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGL 144 (262)
T ss_pred ecCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccc
Confidence 9999999999985322 2367788899999999999999998 999999999999999999999999999
Q ss_pred ceecCCCCCc--ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhC-CCCCCCcccCCccHHHHHHhhCCch
Q 043900 793 ARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTR-KKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 793 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
++........ .......++..|+|||.+.+..++.++|||||||++|||++| .+||..... ...........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~~~~~~~~~~ 219 (262)
T cd05058 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----FDITVYLLQGR 219 (262)
T ss_pred cccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhcCC
Confidence 9765322111 111223467789999999888999999999999999999995 555543211 11111000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
. ......++..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 220 --------~-------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 --------R-------------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --------C-------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0 0000123456889999999999999999999999999874
No 203
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.2e-35 Score=316.04 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=188.0
Q ss_pred CcccccceeeEEEEEEcC--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|.... ....||+|.+.... ......+.+|+..++.++||||++++++|.. ....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-----SIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-----CCceEEEEE
Confidence 369999999999997643 33468888876432 3344678899999999999999999998643 467899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++...... .....++.....++.||+.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 76 ~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 147 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-----VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLA 147 (269)
T ss_pred eCCCCcHHHHHHhcccc-----ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccc
Confidence 99999999999644321 122356788899999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCcccccccccccccccccccC-------CCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGL-------GSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
................++..|+|||+.. +..++.++|||||||++|||++ |..||......+ .......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~-- 224 (269)
T cd05042 148 LEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR-- 224 (269)
T ss_pred cccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh--
Confidence 7543222222223334677899999864 3457889999999999999999 788886432111 0111000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
.......++. .....+.++.+++..|| .||++|||++||++.|.
T Consensus 225 --~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 225 --EQDIKLPKPQ----------------------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --ccCccCCCCc----------------------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000000000 01123456778899999 59999999999999873
No 204
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.8e-35 Score=317.37 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=197.9
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.++++++|++++++++.+. ..+..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEE
Confidence 3677889999999999999999999999999986432 222345778999999999999999998853 34689
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++++|.+++.... ...+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~--------~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~ 144 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMG--------EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRIS 144 (285)
T ss_pred EEEEEecCCCcHHHHHHHhc--------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEe
Confidence 99999999999999885322 12588999999999999999999998 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||++....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ..... .... .
T Consensus 145 Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~-~~~~-~ 218 (285)
T cd05630 145 DLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV-ERLV-K 218 (285)
T ss_pred eccceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH-Hhhh-h
Confidence 999997653222 1123468999999999999999999999999999999999999997532110 00000 0000 0
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 931 (953)
.... . ....+++++.+++.+||+.||++||| ++|+++
T Consensus 219 ~~~~----~----------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 219 EVQE----E----------------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhhh----h----------------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0000 0 00123456889999999999999999 888887
No 205
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.3e-35 Score=311.89 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=199.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|.+.+.||+|++|.||+|.+..+. .||+|.+.... ...+.+.+|+.++++++||+++++++++. ....++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 46888999999999999999987765 69999886433 23467889999999999999999998853 245789
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.++++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 78 v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGD--------GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred EEEcCCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCC
Confidence 999999999999996322 22578999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++....... .......++..|+|||...+..++.++||||||+++|||++ |..||.+....+ ...........
T Consensus 147 g~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~- 222 (260)
T cd05069 147 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYRM- 222 (260)
T ss_pred ccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC-
Confidence 99987643221 11222346778999999988899999999999999999999 899987532111 11110000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
......+..+.+++.+||+.||++||++++|.+.|++
T Consensus 223 -----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -----------------------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----------------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0001234568999999999999999999999999875
No 206
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.5e-35 Score=317.84 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=197.9
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|||+++++++|.. +...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEEEE
Confidence 6778899999999999999999888999999976666667788999999999999999999998643 46789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|..++... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 82 e~~~~~~l~~~~~~~---------~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~ 149 (282)
T cd06643 82 EFCAGGAVDAVMLEL---------ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGV 149 (282)
T ss_pred EecCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccc
Confidence 999999999887521 23589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+...... ........++..|+|||++. +..++.++|||||||++|||++|+.||......+ ......... +
T Consensus 150 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~-~ 225 (282)
T cd06643 150 SAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSE-P 225 (282)
T ss_pred ccccccc--ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcC-C
Confidence 9764321 11223345889999999874 4467889999999999999999999986532111 000000000 0
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. . ...+..++.++.+++.+||+.||.+||+++++++
T Consensus 226 ~---~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 226 P---T-------------------------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred C---C-------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 0000123456889999999999999999999875
No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.2e-35 Score=315.50 Aligned_cols=258 Identities=24% Similarity=0.408 Sum_probs=201.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC---CeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.++|++.+.||+|+||.||+|++..+ ...||+|.++... ....+.+.+|+.++++++||||+++++++. .+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 35688899999999999999998533 3379999986432 334568899999999999999999999853 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 145 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD---------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVC 145 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeE
Confidence 67899999999999999995321 2578999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcc-cccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 786 HVSDFGLARFLPLSPAQT-SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
+|+|||.+..+....... ......++..|+|||++.+..++.++||||||+++||+++ |..||......+ ......
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~ 223 (267)
T cd05066 146 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAIE 223 (267)
T ss_pred EeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHHh
Confidence 999999998764332211 1112224568999999998899999999999999999887 999986532111 111110
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.... ......+++.+.+++.+||+.+|++||++.++++.|+++
T Consensus 224 ~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 224 EGYR------------------------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCc------------------------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0000 000012345688999999999999999999999999875
No 208
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.4e-35 Score=316.85 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=196.9
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
|+..+.||+|+||+||+|.+..+++.||+|.++... ......+.+|++++++++|++++++.+++. .++..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-----TKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----cCCEEE
Confidence 677789999999999999999888899999986432 223355778999999999999999988853 447899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|
T Consensus 77 lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~D 145 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMG--------NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEeccCccHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEec
Confidence 9999999999998885322 22589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||++....... ......|+..|+|||++.+..++.++||||+||++|||++|..||........ .... .......
T Consensus 146 fg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~-~~~~~~~ 220 (285)
T cd05632 146 LGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEV-DRRVLET 220 (285)
T ss_pred CCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH-HHhhhcc
Confidence 99997653221 12234689999999999999999999999999999999999999975321110 0111 0000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVRQ 932 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 932 (953)
... .....+.++.+++.+||+.||++||+ +.++++.
T Consensus 221 ~~~---------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 EEV---------------------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccc---------------------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 000 00123456789999999999999999 6666653
No 209
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.8e-36 Score=328.82 Aligned_cols=238 Identities=26% Similarity=0.262 Sum_probs=185.7
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-----~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-----eCCEEEEEE
Confidence 46999999999999999888899999996432 222344555554 567789999999998853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~ 142 (323)
T cd05575 76 DYVNGGELFFHLQR----------ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGL 142 (323)
T ss_pred cCCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCC
Confidence 99999999998852 23578899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 143 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~---- 211 (323)
T cd05575 143 CKEGIEH--SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILNK---- 211 (323)
T ss_pred CcccccC--CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcC----
Confidence 8753211 1222345689999999999999999999999999999999999999975211 1111111000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT 927 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 927 (953)
... .....+.++.+++.+|++.||++||++.
T Consensus 212 ----~~~--------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 212 ----PLR--------------------LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----CCC--------------------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 000 0001245688999999999999999985
No 210
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3e-35 Score=312.50 Aligned_cols=251 Identities=29% Similarity=0.426 Sum_probs=201.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.||+|+||.||+|... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeE
Confidence 356888999999999999999986 35799999975543 56788999999999999999999999643 47789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d 145 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR--------AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSD 145 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcc
Confidence 99999999999999863321 2589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.++....... ....+..|+|||++.+..++.++||||||+++||+++ |+.||......+ ........
T Consensus 146 ~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~--- 215 (256)
T cd05039 146 FGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVEKG--- 215 (256)
T ss_pred cccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhcC---
Confidence 999986632211 2235678999999988899999999999999999997 999986431110 10000000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
.. ......+++++.+++.+||..+|++|||++|++++|+.+
T Consensus 216 ---------~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 216 ---------YR------------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---------CC------------------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00 000112356788999999999999999999999999753
No 211
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.4e-36 Score=332.20 Aligned_cols=205 Identities=21% Similarity=0.283 Sum_probs=174.1
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
+....++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++.
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~---- 113 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ---- 113 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE----
Confidence 344557899999999999999999999999999999998632 2233456788999999999999999998853
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.+...++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 114 -~~~~~~lv~Ey~~gg~L~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~ 178 (371)
T cd05622 114 -DDRYLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKS 178 (371)
T ss_pred -cCCEEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCC
Confidence 45789999999999999999852 2477888999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS----EVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+.+||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 179 ~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 179 GHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 9999999999987643221 122345699999999998654 378999999999999999999999974
No 212
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-35 Score=320.62 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=202.0
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|||+++++++|. .++..+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEE
Confidence 367999999999999999999998888899999997655555677889999999999999999999864 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|
T Consensus 93 lv~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~D 158 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 158 (297)
T ss_pred EeecccCCCCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECc
Confidence 99999999999999842 2478889999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+....... .......+++.|+|||...+..++.++|||||||++|++++|..||........... ... ..
T Consensus 159 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~----~~ 231 (297)
T cd06656 159 FGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT----NG 231 (297)
T ss_pred CccceEccCCc--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ecc----CC
Confidence 99998654322 112234588899999999998899999999999999999999999964221110000 000 00
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+ ....+...+..+.+++.+||+.+|++||+++++++
T Consensus 232 -----~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 232 -----TP--------------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -----CC--------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00001123456889999999999999999999987
No 213
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-35 Score=315.97 Aligned_cols=253 Identities=26% Similarity=0.405 Sum_probs=199.8
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHH--HHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFK--SFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|++.+.||+|+||+||+|....+++.||+|++......... ...+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 67789999999999999999999999999999865443322 34569999999999999999999543 578899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++. ....+++.+++.++.|+++||+|||+. +++||||||+||++++++.++|+||
T Consensus 76 v~~~~~~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Df 142 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----------KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDF 142 (260)
T ss_dssp EEEEETTEBHHHHHH----------HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSG
T ss_pred ccccccccccccccc----------ccccccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 999999999999995 234689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.+.... ..........++..|+|||++. +..++.++||||+|+++|+|++|..||...... .............
T Consensus 143 g~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~ 218 (260)
T PF00069_consen 143 GSSVKLS--ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKRP 218 (260)
T ss_dssp TTTEEST--STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHTH
T ss_pred ccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhccccc
Confidence 9998651 2223334556899999999998 888999999999999999999999999854110 0111110000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ...........++.+++.+||+.||++||++.|+++
T Consensus 219 ~~------------------------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 219 LP------------------------SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HH------------------------HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc------------------------ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 000000011267999999999999999999999975
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.9e-35 Score=313.87 Aligned_cols=254 Identities=23% Similarity=0.313 Sum_probs=203.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.+.||+|+||.||+|....+++.+|+|++........+.+.+|++++++++||||+++++++. .....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL-----RRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE-----eCCEEEE
Confidence 57899999999999999999998888899999998665556788999999999999999999999853 3477999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
+|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+||
T Consensus 78 ~~e~~~~~~l~~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 78 VMEYCGGGSLQDIYQVT---------RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred EEeCCCCCcHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECcc
Confidence 99999999999988532 13588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS---EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|.+....... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... .......
T Consensus 146 g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~~~~- 221 (262)
T cd06613 146 GVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKSNF- 221 (262)
T ss_pred ccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccC-
Confidence 9997653221 122234578899999998877 88999999999999999999999987532111000 0000000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. .........+.++.+++.+||+.+|++|||+++|+.
T Consensus 222 -------~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 222 -------PP-------------------PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -------CC-------------------ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 000111234567899999999999999999999875
No 215
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.7e-35 Score=320.68 Aligned_cols=260 Identities=25% Similarity=0.389 Sum_probs=201.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKT----TVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
.++|+..+.||+|+||.||+|.+..++. .||+|.+.... ......+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3567888999999999999999866554 47888886433 2334578899999999999999999998743
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
...++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~ 147 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHK---------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNH 147 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCc
Confidence 23579999999999999985321 2478899999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
+||+|||.++...............++..|+|||++.+..++.++|||||||++||+++ |..||.+.... ....+..
T Consensus 148 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~ 225 (303)
T cd05110 148 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLE 225 (303)
T ss_pred eEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987643322222223446778999999999999999999999999999998 89998653211 1111111
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
... .. .....++..+.+++.+||..+|++||+++++++.++++.+.
T Consensus 226 ~~~----------~~--------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 226 KGE----------RL--------------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCC----------CC--------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 00 00001234578999999999999999999999999987544
No 216
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.1e-35 Score=319.96 Aligned_cols=268 Identities=23% Similarity=0.275 Sum_probs=205.7
Q ss_pred CHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccc
Q 043900 622 SYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 700 (953)
Q Consensus 622 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 700 (953)
+.+++..+.++|.+.+.||+|+||.||+|....+++.||+|++..... ....+.+|+.+++++ +|||+++++++|...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 345555668899999999999999999999998888999999864322 345677899999999 899999999998654
Q ss_pred ccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 701 DYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 701 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
+.......++||||+++++|.++++.... ....+++..++.++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~ 162 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLI------CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLT 162 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhh------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc
Confidence 33344678999999999999998853221 123588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCcccCC
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-----EVSINGDVYSYGILLLELVTRKKPVDSMFEGD 855 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~pf~~~~~~~ 855 (953)
.++.+||+|||.+........ ......|+..|+|||++... .++.++|||||||++|||++|+.||.......
T Consensus 163 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 163 TEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred CCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 999999999999986542211 12234588999999987543 36899999999999999999999986532110
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
....+.. .....+ .........+.+++.+||+.+|++||++.|+++
T Consensus 241 -~~~~~~~----~~~~~~-------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 -TLFKIPR----NPPPTL-------------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -HHHHHhc----CCCCCC-------------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0000000 000000 000123346889999999999999999999986
No 217
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4e-35 Score=313.83 Aligned_cols=257 Identities=22% Similarity=0.263 Sum_probs=198.2
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.+++.+.....||+|+||.||+|++..+++.||+|.+........+.+.+|++++++++|+||+++++++. .++.
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~ 79 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----ENGF 79 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cCCE
Confidence 34555666678999999999999999888899999987666666778999999999999999999999864 3477
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-CCcEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE-EMMAH 786 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~k 786 (953)
.++||||+++++|.++++.... ....++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~ 149 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWG-------PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVK 149 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhcc-------cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEE
Confidence 8999999999999999863211 11127788899999999999999998 9999999999999976 67999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE--VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
|+|||.+........ ......++..|+|||++.+.. ++.++||||||+++|+|++|+.||........ ..+...
T Consensus 150 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~ 225 (268)
T cd06624 150 ISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVG 225 (268)
T ss_pred EecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhh
Confidence 999999976532211 122234789999999986643 78899999999999999999999864221110 000000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... . ...+..+.+++.+++.+||+.+|++|||+.|+++
T Consensus 226 ~~~~------~----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 226 MFKI------H----------------------PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhcc------C----------------------CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0000 0 0001123456889999999999999999999976
No 218
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.9e-36 Score=330.63 Aligned_cols=239 Identities=24% Similarity=0.250 Sum_probs=188.8
Q ss_pred CcccccceeeEEEEEE---cCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 637 NEIGVGSFGSVYKGIL---DQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~---~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
+.||+|+||.||++.. ..+++.||+|+++... ......+.+|++++++++||||+++++++. .+...++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence 5799999999999986 3456789999997432 223456778999999999999999999854 44789999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 77 ~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 143 (318)
T cd05582 77 LDFLRGGDLFTRLSK----------EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 143 (318)
T ss_pred EcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeecc
Confidence 999999999998842 23589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
+++...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 144 ~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i~~~--- 213 (318)
T cd05582 144 LSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMILKA--- 213 (318)
T ss_pred CCcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHHHcC---
Confidence 998653221 1223456899999999999888999999999999999999999999752111 111100000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTN 928 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 928 (953)
.. . .+...++.+.+++.+||+.||++||++.+
T Consensus 214 -----~~-~-------------------~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 214 -----KL-G-------------------MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -----CC-C-------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00 0 00123456889999999999999999665
No 219
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.2e-35 Score=319.85 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=201.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+++++.++|||++++++++. ..+..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 46889999999999999999998888899999997655555677889999999999999999999864 3478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~L~~~~~-----------~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~df 159 (296)
T cd06655 94 VMEYLAGGSLTDVVT-----------ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDF 159 (296)
T ss_pred EEEecCCCcHHHHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 999999999999884 12478999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|++........ ......++..|+|||.+.+..++.++|||||||++|++++|+.||........ .. .........
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~-~~~~~~~~~- 234 (296)
T cd06655 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY-LIATNGTPE- 234 (296)
T ss_pred ccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HHHhcCCcc-
Confidence 99876533221 12234588899999999988899999999999999999999999965322110 00 000000000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...+..+++.+.+++.+||+.||++|||+.++++
T Consensus 235 ---------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 ---------------------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ---------------------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0001133456889999999999999999999986
No 220
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4e-35 Score=312.29 Aligned_cols=254 Identities=25% Similarity=0.414 Sum_probs=200.6
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.++||+|+||.||+|...++ +.||+|.+..... ....+.+|+.++++++|+|++++++++. .+..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~-~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCC-ceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCcE
Confidence 35688999999999999999998765 4799999874332 3467889999999999999999998742 25689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 77 IITEYMENGSLVDFLKTPE--------GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred EEEEcCCCCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEcc
Confidence 9999999999999985322 23688999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.+........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||...... ............
T Consensus 146 fg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~ 222 (260)
T cd05067 146 FGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYRM 222 (260)
T ss_pred CcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCCC
Confidence 999987642221 11223346778999999998899999999999999999999 99999753211 111100000000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
......+.++.+++.+||+.+|++|||++++.+.|+.
T Consensus 223 ------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 ------------------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0001234569999999999999999999999999875
No 221
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=8e-36 Score=328.01 Aligned_cols=242 Identities=24% Similarity=0.252 Sum_probs=186.8
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-----cCCeEEEEE
Confidence 46999999999999999888899999996422 122234444443 567789999999998853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~ 142 (325)
T cd05602 76 DYINGGELFYHLQR----------ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGL 142 (325)
T ss_pred eCCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCC
Confidence 99999999998852 23577888899999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 143 a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i~------ 209 (325)
T cd05602 143 CKENIEH--NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYDNIL------ 209 (325)
T ss_pred CcccccC--CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----HHHHHHH------
Confidence 9754221 11223456999999999999999999999999999999999999999742211 1111000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..... .....+..+.+++.+|++.||.+||++.+.+.
T Consensus 210 --~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 210 --NKPLQ--------------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred --hCCcC--------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 00000 00123456889999999999999999875443
No 222
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-35 Score=325.24 Aligned_cols=243 Identities=22% Similarity=0.267 Sum_probs=190.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 707 (953)
+|...+.||+|+||+||+|.+..+++.||+|+++.. .....+.+..|..+++.+. |++|+++.+++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 467789999999999999999988889999999742 2234456778888888885 57777888774 34467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~----------~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL 142 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQ----------VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred EEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 9999999999999998852 23588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......
T Consensus 143 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i-- 213 (323)
T cd05615 143 ADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQSI-- 213 (323)
T ss_pred eccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHH--
Confidence 9999997542221 1222345899999999999999999999999999999999999999753211 111100
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT 927 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 927 (953)
..... . .+...+.++.+++.+|++.+|++|++..
T Consensus 214 ------~~~~~-~-------------------~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 214 ------MEHNV-S-------------------YPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ------HhCCC-C-------------------CCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 00000 0 0002234678999999999999999853
No 223
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-35 Score=320.40 Aligned_cols=277 Identities=20% Similarity=0.275 Sum_probs=201.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||+|+||.||+|.+..++..||+|.++.. .......+.+|++++++++||||++++++|. .++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 3689999999999999999999988889999998643 2334566889999999999999999999964 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
+||||+++++|.++++.. ..+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+
T Consensus 76 lv~ey~~~~~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~ 142 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA----------GRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLC 142 (308)
T ss_pred EEeeccCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEc
Confidence 999999999999999532 357889999999999999999997 5 89999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+...... ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .....+.......
T Consensus 143 dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~ 216 (308)
T cd06615 143 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSE 216 (308)
T ss_pred cCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCcccc
Confidence 99998755322 12234588999999999888899999999999999999999999864321 1111111110000
Q ss_pred h-hhhhcccc-cc--CCchhhhhc----ccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 869 H-VVDIVDST-LL--SDDEDLAVH----GNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 869 ~-~~~~~~~~-l~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. ........ .. ......... ........... ....+.++.+++.+||+.||++|||+.||++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 217 GEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00000000 00 000000000 00000000000 00245679999999999999999999999876
No 224
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.4e-35 Score=311.20 Aligned_cols=257 Identities=27% Similarity=0.436 Sum_probs=202.6
Q ss_pred CcccccceeeEEEEEEcCC---CeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|.+... +..||+|+++..... ..+.+.+|++.++.++|+|++++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999999865 778999999754433 36788999999999999999999998643 57899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|.+++....... .......+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.
T Consensus 76 e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVF-PSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EeccCCcHHHHHhhccccc-cccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 9999999999996432110 001124689999999999999999999998 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
+................++..|+|||.+.+..++.++||||+|+++|||++ |..||...... .......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~----- 221 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-----EVLEYLR----- 221 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHH-----
Confidence 987754432233344557889999999988899999999999999999999 69998753111 1111000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
+.. +......++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 222 ---~~~-------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 ---KGY-------------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---cCC-------------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000 00011133567899999999999999999999998873
No 225
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.7e-35 Score=312.85 Aligned_cols=255 Identities=27% Similarity=0.457 Sum_probs=201.3
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|.+.+.||+|+||.||+|...++ +.||+|.++.... ..+++.+|+.++++++|+|++++++++. .....+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~-~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCC-ceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCceE
Confidence 46789999999999999999998765 5799999874332 3467889999999999999999999853 346789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+|
T Consensus 78 ~v~e~~~~~~L~~~i~~~~--------~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d 146 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGE--------GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIAD 146 (261)
T ss_pred EEEeccCCCCHHHHHhccc--------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECc
Confidence 9999999999999996432 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.++...... ........++..|+|||.+.+..++.++||||+|+++||+++ |+.||....... ...... ....
T Consensus 147 ~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~-~~~~- 222 (261)
T cd05034 147 FGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVE-RGYR- 222 (261)
T ss_pred cccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH-cCCC-
Confidence 99998764321 111112234568999999998899999999999999999999 999986432110 011000 0000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
.......+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 -----------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 -----------------------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00001224568899999999999999999999999875
No 226
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.9e-35 Score=320.63 Aligned_cols=206 Identities=21% Similarity=0.306 Sum_probs=163.4
Q ss_pred cCcccccceeeEEEEEEcC--CCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 636 ANEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
.++||+|+||+||+|++.+ +++.||+|.++... ......+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 4689999999999999764 45789999986432 23457789999999999999999998643 23456899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe----cCCCcEEEec
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL----DEEMMAHVSD 789 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~D 789 (953)
|++ ++|.+++....... .......+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 81 YAE-HDLWHIIKFHRASK-ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred ccC-CCHHHHHHhccccc-ccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 995 58888775332211 111233589999999999999999999999 99999999999999 4567899999
Q ss_pred cccceecCCCCCc-ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 790 FGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 790 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
||+++.+...... .......||+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999876432211 122345689999999998774 5899999999999999999999999753
No 227
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.8e-35 Score=317.28 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=199.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
+.|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++|||++++++++. .+...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence 56889999999999999999999888899999998766666788899999999999999999999864 3367999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|..++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 87 v~e~~~~~~l~~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 87 MIEFCPGGAVDAIMLEL---------DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred EEecCCCCcHHHHHHhh---------cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccC
Confidence 99999999998887422 23588999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|.+...... ........++..|+|||++. ...++.++|||||||++|||++|..||...... ......
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~~~~ 227 (292)
T cd06644 155 GVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKI 227 (292)
T ss_pred ccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----HHHHHH
Confidence 998754321 11222345788999999874 345788999999999999999999998642211 000000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..... +. .......+.++.+++.+||+.||++||+++|+++
T Consensus 228 ~~~~~-----~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 228 AKSEP-----PT--------------------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred hcCCC-----cc--------------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00 0001123456889999999999999999999976
No 228
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-34 Score=308.57 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=200.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|++|.||+|.+..+++.||+|.+... .....+.+.+|++++++++|+|++++++.+.. .+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 488899999999999999999988889999998643 23345678899999999999999999887432 234678
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|
T Consensus 77 lv~e~~~~~~l~~~l~~~~--------~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~d 145 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQK--------GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGD 145 (257)
T ss_pred EEecccCCCcHHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEec
Confidence 9999999999999996322 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||++....... .......+++.|+|||+..+..++.++||||+|+++||+++|+.||..... ...........
T Consensus 146 f~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~ 218 (257)
T cd08223 146 LGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGK 218 (257)
T ss_pred ccceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcC
Confidence 99998764321 122334588999999999999999999999999999999999999864211 11111110000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... .....++++.+++.+||+.||++|||+.|+++
T Consensus 219 --------~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 219 --------LPP-------------------MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --------CCC-------------------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00123456889999999999999999999986
No 229
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.1e-38 Score=334.71 Aligned_cols=370 Identities=24% Similarity=0.374 Sum_probs=303.4
Q ss_pred cEEEEEeCCCeee-eecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEec
Q 043900 5 RVKILNLTSLKLA-GSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRL 83 (953)
Q Consensus 5 ~~~~l~l~~~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 83 (953)
=|+.+|+++++.+ +..|.++..++.++-|-|...++.. +|++++.+++|++|.++||++. .+-+.++.++.|+.+.+
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~-vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQ-VPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhh-ChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3788899999987 6788899999999999999999997 8999999999999999999998 78888899999999999
Q ss_pred cCcccc-ccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccC
Q 043900 84 FYNELV-GKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSG 162 (953)
Q Consensus 84 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (953)
.+|.+. .-+|..+..|..|..||||+|+++ ..|..+..-.++-.|+||+|+|.++....|.+|+.|-.|+|++|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-
Confidence 999986 456888889999999999999998 88888888889999999999998666667889999999999999998
Q ss_pred CCCCcccccccceEEecCCcccccccccccccccccccEEEeeCcccc-CCCCCCCcCCCCCcEEEcccccccCcCCCCC
Q 043900 163 TIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLT-GAIPPAISNASNLELFQADVNKLTGEVPYLE 241 (953)
Q Consensus 163 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~ 241 (953)
.+|..+..+..|+.|+|++|.+....-..+. .|.+|+.|.+++.+=+ ..+|..+..+.+|..+|++.|.+.
T Consensus 164 ~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp------- 235 (1255)
T KOG0444|consen 164 MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP------- 235 (1255)
T ss_pred hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc-cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-------
Confidence 7888888889999999999877532111111 4666667777665543 345666666666666666666654
Q ss_pred CCCccceeeecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccC
Q 043900 242 KPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGK 321 (953)
Q Consensus 242 ~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~ 321 (953)
.+|+++..+ .+|+.|+|++|+|+ .+....+.
T Consensus 236 -----------------------------------------------~vPecly~l-~~LrrLNLS~N~it-eL~~~~~~ 266 (1255)
T KOG0444|consen 236 -----------------------------------------------IVPECLYKL-RNLRRLNLSGNKIT-ELNMTEGE 266 (1255)
T ss_pred -----------------------------------------------cchHHHhhh-hhhheeccCcCcee-eeeccHHH
Confidence 467888888 58999999999998 56667788
Q ss_pred CCCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCceeeEEEccCCcCCCCCCccCCCCCCCcEEEc
Q 043900 322 FVNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDL 401 (953)
Q Consensus 322 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 401 (953)
+.+|++|+||.|+++ .+|++++.+++|+.|.+.+|+++ +. -+|+.++.+.+|+.+..
T Consensus 267 W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~---------------------Fe-GiPSGIGKL~~Levf~a 323 (1255)
T KOG0444|consen 267 WENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT---------------------FE-GIPSGIGKLIQLEVFHA 323 (1255)
T ss_pred Hhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc---------------------cc-CCccchhhhhhhHHHHh
Confidence 899999999999998 89999999999999999999986 22 37888888888888888
Q ss_pred CCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccC
Q 043900 402 SDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQG 481 (953)
Q Consensus 402 ~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 481 (953)
++|++. .+|+.++.+..|+.|.|++|++- .+|+++.-++.|+.|||..|.=--
T Consensus 324 anN~LE--------------------------lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 324 ANNKLE--------------------------LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred hccccc--------------------------cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCcc
Confidence 888776 56677778888888888888887 788888888889999998887442
Q ss_pred CCCc
Q 043900 482 PIPS 485 (953)
Q Consensus 482 ~~p~ 485 (953)
..|.
T Consensus 377 MPPK 380 (1255)
T KOG0444|consen 377 MPPK 380 (1255)
T ss_pred CCCC
Confidence 4443
No 230
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.5e-35 Score=311.26 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=202.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|+..+.||+|+||.||+|....+++.||+|.++.... .+.+.+|++++++++||||+++++++. .+...+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 3578999999999999999999998778999999875432 678999999999999999999999854 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+++||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|
T Consensus 75 l~~e~~~~~~L~~~l~~~---------~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~d 142 (256)
T cd06612 75 IVMEYCGAGSVSDIMKIT---------NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLAD 142 (256)
T ss_pred EEEecCCCCcHHHHHHhC---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcc
Confidence 999999999999998532 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+........ ......++..|+|||++.+..++.++||||||+++|||++|+.||.......... .
T Consensus 143 fg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-----~----- 210 (256)
T cd06612 143 FGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-----M----- 210 (256)
T ss_pred cccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-----h-----
Confidence 999986643221 2223447889999999999899999999999999999999999987532211000 0
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...... .........+.++.+++.+||+.||++|||+.|+++
T Consensus 211 ----~~~~~~----------------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 ----IPNKPP----------------PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----hccCCC----------------CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000000 000111133456889999999999999999999985
No 231
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.1e-34 Score=310.71 Aligned_cols=258 Identities=24% Similarity=0.388 Sum_probs=195.9
Q ss_pred CcccccceeeEEEEEEcCCCe--EEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKT--TVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++.+++. .+|+|.++.. .....+.+.+|+++++++ +||||++++++|.. ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 468999999999999977654 4688888643 334556788999999999 79999999999643 36689999
Q ss_pred eeccCCchhhccccCCcCCc------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 713 EFMQNRSLEEWLHPITREDK------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
||+++|+|.+++........ .......+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 99999999999864332100 011223588999999999999999999998 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||++..... .........+..|+|||++.+..++.++|||||||++|||++ |..||...... ......
T Consensus 153 l~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~ 224 (270)
T cd05047 153 IADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKL 224 (270)
T ss_pred ECCCCCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHH
Confidence 999999863221 111111224567999999988899999999999999999997 99998642211 111100
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
... .. ......++.++.+++.+||+.+|.+|||+.|+++.|+.+.
T Consensus 225 ~~~---------~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQG---------YR------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCC---------CC------------------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 00 0000123456889999999999999999999999998764
No 232
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.6e-35 Score=322.44 Aligned_cols=285 Identities=18% Similarity=0.165 Sum_probs=198.7
Q ss_pred ccCccccc--ceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 635 SANEIGVG--SFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 635 ~~~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
+.++||+| +|++||++....+++.||+|+++.. .....+.+.+|+++++.++||||++++++|. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45789999 7899999999999999999999743 2334466788999999999999999999964 3477899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 77 v~e~~~~~~l~~~~~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~ 145 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM--------DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 145 (327)
T ss_pred EEeccCCCcHHHHHHhhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEccc
Confidence 9999999999999853321 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCC-----cccccccccccccccccccCC--CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH
Q 043900 791 GLARFLPLSPA-----QTSSIDAKGSIGYIAPEYGLG--SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 791 G~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~ 863 (953)
|.+........ ........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~ 224 (327)
T cd08227 146 RSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLN 224 (327)
T ss_pred chhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhc
Confidence 87643321110 011122346788999999876 468899999999999999999999997532221111 1110
Q ss_pred hhCCchh-------hhh--------ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 043900 864 MALPDHV-------VDI--------VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTN 928 (953)
Q Consensus 864 ~~~~~~~-------~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 928 (953)
...+... .+. .+........ .....................+++.+++.+||+.||++|||++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e 303 (327)
T cd08227 225 GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTT-VSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAST 303 (327)
T ss_pred CCccccccccchhhhhcccCCcccCCcCCCCcccc-cCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHH
Confidence 0000000 000 0000000000 00000000000001112234568999999999999999999999
Q ss_pred HHH--HHHHHH
Q 043900 929 VVR--QLQSIK 937 (953)
Q Consensus 929 vl~--~L~~i~ 937 (953)
+++ .++.++
T Consensus 304 ll~~p~f~~~~ 314 (327)
T cd08227 304 LLNHSFFKQIK 314 (327)
T ss_pred HhcChhhhhcc
Confidence 987 355544
No 233
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.6e-36 Score=327.75 Aligned_cols=242 Identities=25% Similarity=0.254 Sum_probs=187.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHH-HHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|+++.. .......+..|.. +++.++||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----cCCEEEEEE
Confidence 4699999999999999988889999999643 2223345555554 467789999999998853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~ 142 (325)
T cd05604 76 DFVNGGELFFHLQR----------ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGL 142 (325)
T ss_pred cCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCC
Confidence 99999999988842 23588999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 143 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~---- 211 (325)
T cd05604 143 CKEGIAQ--SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHK---- 211 (325)
T ss_pred cccCCCC--CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcC----
Confidence 8753211 1122345689999999999999999999999999999999999999964211 1111111000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... ....+.++.+++.+|++.||.+||++.+.++
T Consensus 212 ----~~~~--------------------~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 212 ----PLVL--------------------RPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred ----CccC--------------------CCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 0000 0012345779999999999999999864333
No 234
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.6e-35 Score=319.69 Aligned_cols=281 Identities=21% Similarity=0.304 Sum_probs=201.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|.+.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++++++. .....
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeE
Confidence 357899999999999999999999888899999987432 233456778999999999999999999954 34779
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++ ++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~---------~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 146 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDC---------GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLA 146 (301)
T ss_pred EEEEeccc-cCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEEC
Confidence 99999996 5888887532 22478899999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|||.+....... .......+++.|+|||++.+. .++.++|||||||++|||++|+.||......+ ..........
T Consensus 147 dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~ 222 (301)
T cd07873 147 DFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILG 222 (301)
T ss_pred cCcchhccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcC
Confidence 999997543221 112234578899999987654 57889999999999999999999997532211 1111111111
Q ss_pred ch----hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHHH
Q 043900 868 DH----VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR--QLQSIK 937 (953)
Q Consensus 868 ~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~i~ 937 (953)
.. +....+........ .. ..............+..+.+++.+|++.||.+|||++|+++ .++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYN---YP--KYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred CCChhhchhhhccccccccc---cC--ccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 11 11111100000000 00 00000000011134557889999999999999999999987 344443
No 235
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.9e-35 Score=317.05 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=201.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.||.|+||.||+|.+..+++.||+|+++.......+.+.+|++++++++||||+++++++. .+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 457899999999999999999998888899999998766666778999999999999999999999964 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|
T Consensus 79 lv~e~~~~~~L~~~~~~~---------~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d 146 (280)
T cd06611 79 ILIEFCDGGALDSIMLEL---------ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLAD 146 (280)
T ss_pred EEeeccCCCcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEcc
Confidence 999999999999998532 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||.+...... ........+++.|+|||++. +..++.++||||||+++|||++|+.||....... ....+..
T Consensus 147 ~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~- 222 (280)
T cd06611 147 FGVSAKNKST--LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILK- 222 (280)
T ss_pred Cccchhhccc--ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhc-
Confidence 9998754322 11222345889999999864 3457889999999999999999999987531110 0100000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... +. ...+..++.++.+++.+||+.+|++||++.++++.
T Consensus 223 ---~~~-----~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 223 ---SEP-----PT--------------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ---CCC-----CC--------------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 00 00011234568899999999999999999999774
No 236
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-35 Score=332.86 Aligned_cols=276 Identities=20% Similarity=0.206 Sum_probs=198.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcC--CCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
..+|.+.+.||+|+||.||+|...+ .++.||+|.+... ....+|++++++++||||+++++++. ....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR-----WKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe-----eCCE
Confidence 3579999999999999999998653 3467999987532 23467999999999999999998853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+. ++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~----------~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l 226 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDR----------SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVL 226 (392)
T ss_pred EEEEehhcC-CCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEE
Confidence 899999995 688888731 23689999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCC--ccHHHHHHhh
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGD--MNLHNFARMA 865 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~--~~~~~~~~~~ 865 (953)
+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..+.......
T Consensus 227 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~ 306 (392)
T PHA03207 227 GDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCM 306 (392)
T ss_pred ccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHh
Confidence 99999987654433333345679999999999999999999999999999999999999997533221 1111111111
Q ss_pred CCchhhhhccc---cccCCchhhhhcccchhh--hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 866 LPDHVVDIVDS---TLLSDDEDLAVHGNQRQR--QARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... .+.... .+........ ...++. ....-.....+.++.+++.+|+..||++|||+.|++..
T Consensus 307 ~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 307 QVHP-LEFPQNGSTNLCKHFKQYA--IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccCc-cccCCccchhHHHHHHhhc--ccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 000000 0000000000 000000 00000011234568899999999999999999999875
No 237
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.8e-35 Score=315.23 Aligned_cols=276 Identities=24% Similarity=0.317 Sum_probs=198.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|++|.||+|+...+++.||+|+++... ......+.+|+.++++++|||++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 4788899999999999999999888899999986432 223467889999999999999999999954 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++ ++|.+++..... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~-------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 144 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK-------GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLAD 144 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC-------CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECc
Confidence 9999997 688888853221 23689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC-
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP- 867 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~- 867 (953)
||++....... .......+++.|+|||++.+. .++.++|||||||++|||+||+.||......+.... .......
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~ 221 (285)
T cd07861 145 FGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR-IFRILGTP 221 (285)
T ss_pred ccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHhCCC
Confidence 99997653221 122233578899999987654 578999999999999999999999975322111111 1000000
Q ss_pred -chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 -DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+........ ..+... .................++++.+++.+||+.||++|||+.||++
T Consensus 222 ~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 222 TEDVWPGVTS--LPDYKN---TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred Chhhhhcchh--hHHHHh---hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 000000 00000000000001124567889999999999999999999875
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.3e-35 Score=313.26 Aligned_cols=240 Identities=22% Similarity=0.335 Sum_probs=184.5
Q ss_pred cccccceeeEEEEEEcC------------------------CCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEE
Q 043900 638 EIGVGSFGSVYKGILDQ------------------------GKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKI 693 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 693 (953)
.||+|+||.||+|.... ....||+|+++.........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998532 123589999875555555678889999999999999999
Q ss_pred EeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 694 LTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 694 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
+++|.. +...++||||+++|+|..++... ...+++..+..++.|+++||+|||+. +|+|||||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlk 144 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKE---------KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVC 144 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCC
Confidence 999753 36789999999999999988532 23578899999999999999999998 99999999
Q ss_pred CCCeEecCCC-------cEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHH-hC
Q 043900 774 PSNVLLDEEM-------MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELV-TR 844 (953)
Q Consensus 774 p~NIll~~~~-------~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~ell-tg 844 (953)
|+||+++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999997643 4899999988643211 12347788999998865 56899999999999999995 69
Q ss_pred CCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC
Q 043900 845 KKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM 924 (953)
Q Consensus 845 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 924 (953)
+.||......+ ......... ... .....++.+++.+||+.+|++||
T Consensus 219 ~~p~~~~~~~~--~~~~~~~~~----------~~~----------------------~~~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 219 EVPLKERTPSE--KERFYEKKH----------RLP----------------------EPSCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred CCCccccChHH--HHHHHHhcc----------CCC----------------------CCCChHHHHHHHHHcccChhhCc
Confidence 99986432111 011100000 000 01123588999999999999999
Q ss_pred CHHHHHHHHH
Q 043900 925 NMTNVVRQLQ 934 (953)
Q Consensus 925 t~~evl~~L~ 934 (953)
|+.++++.|+
T Consensus 265 s~~~il~~L~ 274 (274)
T cd05076 265 SFRTILRDLT 274 (274)
T ss_pred CHHHHHHhhC
Confidence 9999998773
No 239
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=319.20 Aligned_cols=245 Identities=26% Similarity=0.336 Sum_probs=196.7
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.|.-.+.||.|+||.||-|++..+.+.||||++.. ...+.+.++.+|+..+++++|||++.+.|+|. .....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchH
Confidence 35566889999999999999999999999999963 33445678999999999999999999999853 33667
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
|+||||| -|+-.+.+.-. .+++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+
T Consensus 102 WLVMEYC-lGSAsDlleVh---------kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLa 168 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVH---------KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLA 168 (948)
T ss_pred HHHHHHH-hccHHHHHHHH---------hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeec
Confidence 9999999 55777776422 34688999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|||.|....+ ....+|||.|||||++. .+.|+-++||||+|++..|+..+++|+..+..... +.+.+...
T Consensus 169 DFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA-LYHIAQNe 241 (948)
T KOG0577|consen 169 DFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNE 241 (948)
T ss_pred cccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH-HHHHHhcC
Confidence 9999987642 23457999999999864 46899999999999999999999999765322111 01111100
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. +.+. ..+.++.+.+++..|+++-|.+|||.+++++
T Consensus 242 s---------PtLq---------------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 242 S---------PTLQ---------------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred C---------CCCC---------------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 0 0010 1144667999999999999999999999875
No 240
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.4e-35 Score=330.99 Aligned_cols=202 Identities=25% Similarity=0.302 Sum_probs=173.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|+..+.||+|+||.||+|+...+++.||+|+++.. .......+.+|+.++..++||+|+++++++ .+.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4688999999999999999999998899999999642 233456788899999999999999999985 44578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----------~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL 142 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMK----------KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKL 142 (360)
T ss_pred EEEEEeCCCCccHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEE
Confidence 9999999999999999852 23588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCc---------------------------------ccccccccccccccccccCCCCCCcccchHHH
Q 043900 788 SDFGLARFLPLSPAQ---------------------------------TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSY 834 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~sl 834 (953)
+|||+++........ .......||+.|+|||++.+..++.++|||||
T Consensus 143 ~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 222 (360)
T cd05627 143 SDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222 (360)
T ss_pred eeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccc
Confidence 999998754321100 00123469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCC
Q 043900 835 GILLLELVTRKKPVDS 850 (953)
Q Consensus 835 G~vl~elltg~~pf~~ 850 (953)
||++|||++|+.||..
T Consensus 223 Gvilyel~tG~~Pf~~ 238 (360)
T cd05627 223 GVIMYEMLIGYPPFCS 238 (360)
T ss_pred cceeeecccCCCCCCC
Confidence 9999999999999975
No 241
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.6e-35 Score=307.68 Aligned_cols=248 Identities=28% Similarity=0.403 Sum_probs=194.9
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
++||+|+||.||+|.+.+ ++.||+|+++..... ....+.+|++++++++|+||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 469999999999999987 679999998754333 5568899999999999999999999864 336789999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++... ...+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.+..
T Consensus 75 ~~~~l~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 75 PGGSLLTFLRKK---------KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred CCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 999999998532 12478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIV 874 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (953)
..............++..|+|||.+.+..++.++|||||||++|||+| |..||...... ..........
T Consensus 143 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~-------- 212 (251)
T cd05041 143 EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY-------- 212 (251)
T ss_pred ccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC--------
Confidence 532211111112234667999999998899999999999999999999 88888643211 1111110000
Q ss_pred cccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 875 DSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 875 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
. ...+...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 213 ----~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 213 ----R------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ----C------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0 0000123457899999999999999999999999886
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-34 Score=313.78 Aligned_cols=277 Identities=22% Similarity=0.286 Sum_probs=200.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++|||++++++++. .+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 46889999999999999999999888899999986432 223456789999999999999999999854 34778
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++++++..+... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~ 142 (286)
T cd07847 76 HLVFEYCDHTVLNELEKN----------PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLC 142 (286)
T ss_pred EEEEeccCccHHHHHHhC----------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEEC
Confidence 999999999988887642 23589999999999999999999998 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh--h
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM--A 865 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~--~ 865 (953)
|||.+........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+.. ...... .
T Consensus 143 dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~-~~~~~~~~~ 219 (286)
T cd07847 143 DFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL-YLIRKTLGD 219 (286)
T ss_pred ccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCC
Confidence 9999987643321 1223347889999999876 45789999999999999999999999754322111 111100 0
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
......+..+...... ........ ............+..+.+++.+||+.||++|||+.|++.
T Consensus 220 ~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 220 LIPRHQQIFSTNQFFK--GLSIPEPE-TREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CChHHhhhcccccccc--cccCCCcc-cccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0001111111000000 00000000 000000011123567899999999999999999999875
No 243
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.5e-35 Score=312.48 Aligned_cols=255 Identities=27% Similarity=0.429 Sum_probs=196.9
Q ss_pred CcccccceeeEEEEEEcCCC------eEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 637 NEIGVGSFGSVYKGILDQGK------TTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+.||+|+||.||+|+..+.. +.||+|.+.... ......+.+|+.+++.++||||++++++|. ..+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 36899999999999986533 679999885432 344667889999999999999999999864 346789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-----c
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-----M 784 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~ 784 (953)
+||||+++++|.+++....... .....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVER---FGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcc---cCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcc
Confidence 9999999999999996432210 0233578999999999999999999998 999999999999999877 8
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
++++|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~ 227 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVT 227 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHh
Confidence 99999999976543322222223346788999999999999999999999999999998 99998642111 1111000
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
. .. +.......+..+.+++.+||+.+|++||+++++++.|+
T Consensus 228 ~---~~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 228 A---GG---------------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred c---CC---------------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 00 00011134567889999999999999999999999886
No 244
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.5e-35 Score=309.27 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=197.1
Q ss_pred CcccccceeeEEEEEEcC-CC--eEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQ-GK--TTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|++|.||+|.+.. ++ ..||+|.++.... ...+.+.+|+..+++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999865 22 3699999976554 566789999999999999999999998532 6789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.
T Consensus 75 e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~ 143 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL--------GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGL 143 (257)
T ss_pred EecCCCcHHHHHHhccc--------ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccc
Confidence 99999999999964221 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 793 ARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 793 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ........ ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~--~~- 218 (257)
T cd05040 144 MRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKE--GE- 218 (257)
T ss_pred cccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc--CC-
Confidence 9876442221 11123447789999999998899999999999999999999 999986432111 10000000 00
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
. .......+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 219 ------~--------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 ------R--------------------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ------c--------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 0000123457889999999999999999999999875
No 245
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.1e-34 Score=311.62 Aligned_cols=249 Identities=24% Similarity=0.310 Sum_probs=200.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||.|++|.||+|.+..+++.||+|++.... ......+.+|+++++.++|+|++++++++. ++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 36888899999999999999999888899999987443 344567889999999999999999999854 337889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|+||+++++|.+++.. ..+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d 141 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP-----------GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLAD 141 (274)
T ss_pred EEEEeeCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999852 2588999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.++...... .......++..|+|||++.+..++.++||||||+++|||+||+.||....... .........+..
T Consensus 142 ~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~ 217 (274)
T cd06609 142 FGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKNNPPS 217 (274)
T ss_pred cccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhcCCCC
Confidence 99998775321 22233458889999999999889999999999999999999999996432110 000000000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. . ..++.++.+++.+||..||++|||++++++
T Consensus 218 --------~~--------------------~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 218 --------LE--------------------G-NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred --------Cc--------------------c-cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00 0 013456889999999999999999999976
No 246
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.7e-34 Score=306.81 Aligned_cols=251 Identities=19% Similarity=0.268 Sum_probs=202.6
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|+..+.||+|+||.||.++...+++.||+|.+... .....+.+.+|++++++++|+||+++++++. +.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 488899999999999999999988889999998643 3445677889999999999999999999964 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|
T Consensus 76 ~~~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d 144 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK--------GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGD 144 (256)
T ss_pred EEEEecCCCcHHHHHHhcc--------ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECc
Confidence 9999999999999986322 23588999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+........ ......+++.|+|||+..+..++.++||||||+++|||++|..||..... ..........
T Consensus 145 ~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~- 216 (256)
T cd08221 145 FGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQG- 216 (256)
T ss_pred CcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcC-
Confidence 999987643321 22334589999999999888899999999999999999999999864211 1111110000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... ....++.++.+++.+||+.+|++||++.|+++.
T Consensus 217 -------~~~~-------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 217 -------NYTP-------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -------CCCC-------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0000 001334568899999999999999999999875
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.1e-34 Score=309.63 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=201.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
..|+..+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++++.||||+++++++. ++...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 35778899999999999999998888899999987433 345678889999999999999999999964 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++|+|.+++.. ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 79 lv~e~~~~~~L~~~i~~-----------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~d 144 (277)
T cd06640 79 IIMEYLGGGSALDLLRA-----------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLAD 144 (277)
T ss_pred EEEecCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcc
Confidence 99999999999998852 2478889999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+....... .......++..|+|||++.+..++.++|||||||++|||++|..||........ .
T Consensus 145 fg~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~------- 210 (277)
T cd06640 145 FGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----L------- 210 (277)
T ss_pred cccceeccCCc--cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----h-------
Confidence 99997664322 122234578899999999888999999999999999999999999875321110 0
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
........ ......++..+.+++.+||+.+|++||+++++++.
T Consensus 211 --~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 --FLIPKNNP------------------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred --hhhhcCCC------------------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 00000000 00112356678899999999999999999999775
No 248
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.1e-35 Score=314.41 Aligned_cols=266 Identities=22% Similarity=0.258 Sum_probs=205.2
Q ss_pred cCHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 621 ISYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
.+..++....+.|++.+.||+|+||.||+|.+...++.||+|++.... .....+..|+.+++++ +|+|++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 345566667788999999999999999999999888899999986543 3345678899999998 69999999999753
Q ss_pred ccc-CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeE
Q 043900 700 VDY-QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVL 778 (953)
Q Consensus 700 ~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 778 (953)
... ......++||||+++|+|.+++..... ..+++..++.++.|++.|++|||+. +++||||+|+||+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nil 153 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--------NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVL 153 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence 311 234678999999999999999864322 2477888999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCCccc
Q 043900 779 LDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDSMFE 853 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~~~~ 853 (953)
+++++.++|+|||.+....... .......|+..|+|||++. +..++.++|||||||++|||++|..||.....
T Consensus 154 i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 154 LTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred ECCCCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 9999999999999987553211 1222345889999999875 35688899999999999999999999964321
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... .. .... ..... .....++.++.+++.+||+.||.+|||+.|+++
T Consensus 232 ~~~----~~---------~~~~-~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 232 MRA----LF---------LIPR-NPPPK-----------------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred Hhh----hh---------hHhh-CCCCC-----------------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 100 00 0000 00000 000124557899999999999999999999975
No 249
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.9e-35 Score=309.43 Aligned_cols=240 Identities=22% Similarity=0.370 Sum_probs=185.3
Q ss_pred CcccccceeeEEEEEEcCC------------CeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 637 NEIGVGSFGSVYKGILDQG------------KTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
+.||+|+||.||+|+.... ...||+|++..........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 4689999999999986422 23589998876555556678889999999999999999999643
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
+...++||||+++|+|..++... ...+++..++.++.||++||+|||+. +|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRK---------SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGI 143 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCc
Confidence 36679999999999999887522 23588999999999999999999999 9999999999999987664
Q ss_pred -------EEEeccccceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHH-hCCCCCCCcccCC
Q 043900 785 -------AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELV-TRKKPVDSMFEGD 855 (953)
Q Consensus 785 -------~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~ell-tg~~pf~~~~~~~ 855 (953)
++++|||.+..... .....++..|+|||++. +..++.++|||||||++|||+ +|..||......+
T Consensus 144 ~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 144 DGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred cCCCCceeEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 89999999875421 12234788999999886 467899999999999999998 5888876421110
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
...... ..... .....+++.+++.+||+.||++||++.++++.+
T Consensus 218 --~~~~~~------------~~~~~--------------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 218 --KERFYE------------GQCML--------------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --HHHHHh------------cCccC--------------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000000 00000 001134688999999999999999999999875
No 250
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-34 Score=311.23 Aligned_cols=265 Identities=23% Similarity=0.379 Sum_probs=200.7
Q ss_pred CcccCcccccceeeEEEEEEcC---CCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC-CCC
Q 043900 633 FASANEIGVGSFGSVYKGILDQ---GKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ-GND 706 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 706 (953)
|.+.+.||+|+||.||+|.+.. +++.||+|+++.. .....+++.+|++++++++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678899999999999998753 4578999998643 334466788999999999999999999987543111 112
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++++||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG----EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc----CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEE
Confidence 357899999999999887432211 1123578999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.++...............++..|++||.+.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~-- 229 (273)
T cd05074 154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLI-- 229 (273)
T ss_pred ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHH--
Confidence 999999986643322222223345678999999988889999999999999999999 88888642211 1111100
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
... .. . ....++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 230 -~~~-------~~-~-------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 -KGN-------RL-K-------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -cCC-------cC-C-------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 00 0 0012345689999999999999999999999999876
No 251
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.2e-35 Score=315.41 Aligned_cols=281 Identities=22% Similarity=0.323 Sum_probs=196.9
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++++|.+.+.||+|+||.||+|....+++.||+|+++... ......+.+|+.+++.++|+||+++++++. .++.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCe
Confidence 4578999999999999999999998888899999986432 233346778999999999999999999854 3467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||++ +++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l 144 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQH---------PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKL 144 (291)
T ss_pred EEEEEeccc-CCHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEE
Confidence 899999995 6777666321 12467888999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH-hh
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR-MA 865 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~-~~ 865 (953)
+|||+++....... ......++..|+|||++.+. .++.++|||||||++|||++|+.||+........+..... ..
T Consensus 145 ~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~ 222 (291)
T cd07870 145 ADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLG 222 (291)
T ss_pred eccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcC
Confidence 99999975432211 12234478899999998764 5788999999999999999999999753322111111110 00
Q ss_pred CCch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.. ...... ........ ...................+.++.+++.+|++.||++|||++|++.
T Consensus 223 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 223 VPTEDTWPGVS-KLPNYKPE-WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred CCChhhhhhhh-hcccccch-hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 1110 000000 00000000 0000000000000001112456889999999999999999999874
No 252
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.5e-35 Score=322.53 Aligned_cols=202 Identities=24% Similarity=0.284 Sum_probs=171.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|+...+++.||+|+++.. .....+.+.+|..++..++|++|+++++++. .++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-----DENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-----cCCe
Confidence 4789999999999999999999988889999999632 2234456888999999999999999999854 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl 143 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKF---------EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRL 143 (331)
T ss_pred EEEEEecCCCCcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEE
Confidence 99999999999999998532 23588899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+|||++........ .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 144 ~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 144 ADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EECCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 99999976543222 12223458999999999863 4578899999999999999999999964
No 253
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.5e-34 Score=305.97 Aligned_cols=247 Identities=27% Similarity=0.370 Sum_probs=192.7
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
++||+|+||.||+|...+ ++.||+|+++... ......+.+|++++++++||||++++++|.. ....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKD-KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEecC-CcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECC
Confidence 469999999999999765 5589999986443 3334578899999999999999999999643 36789999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++... ...+++..++.++.|++.||.|+|+. +++||||||+||+++.++.+||+|||++..
T Consensus 75 ~~~~L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 75 PGGDFLSFLRKK---------KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred CCCcHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCcccee
Confidence 999999988532 12478999999999999999999998 999999999999999999999999999975
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIV 874 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (953)
...... .......++..|+|||++.+..++.++||||||+++||+++ |..||....... ........
T Consensus 143 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~~~--------- 210 (250)
T cd05085 143 EDDGIY-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVEKG--------- 210 (250)
T ss_pred cccccc-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHHcC---------
Confidence 432211 11112234678999999998899999999999999999999 999986532111 00000000
Q ss_pred cccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 875 DSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 875 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
... .....++.++.+++.+||+.+|++||++.|+++.|.
T Consensus 211 ---~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 ---YRM------------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ---CCC------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 000 000123456899999999999999999999999875
No 254
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.2e-35 Score=324.07 Aligned_cols=238 Identities=25% Similarity=0.253 Sum_probs=184.5
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECN-TLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++. ..+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-----TAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCEEEEEE
Confidence 46999999999999999888899999986422 222344555554 578889999999998853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|..++.. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 142 (321)
T cd05603 76 DYVNGGELFFHLQR----------ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGL 142 (321)
T ss_pred cCCCCCCHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCC
Confidence 99999999888742 23578888999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 143 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~---- 211 (321)
T cd05603 143 CKEGVEP--EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHK---- 211 (321)
T ss_pred CccCCCC--CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcC----
Confidence 8753221 1122345689999999999999999999999999999999999999965211 1111111000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMT 927 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 927 (953)
... .+.....++.+++.+|++.||++||++.
T Consensus 212 ----~~~--------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 212 ----PLQ--------------------LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ----CCC--------------------CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 000 0001234588999999999999999864
No 255
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.4e-35 Score=322.64 Aligned_cols=282 Identities=19% Similarity=0.212 Sum_probs=204.3
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 56899999999999999999999988889999998642 23345678889999999999999999998765555555678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++|+||++ +++.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~lv~e~~~-~~l~~~~~-----------~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~ 148 (336)
T cd07849 84 YIVQELME-TDLYKLIK-----------TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKIC 148 (336)
T ss_pred EEEehhcc-cCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEC
Confidence 99999996 47877764 23589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCc-ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 789 DFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 789 DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|||++......... .......|+..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..........
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~ 226 (336)
T cd07849 149 DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVL 226 (336)
T ss_pred cccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHc
Confidence 99999865432211 12223468899999998654 56889999999999999999999999652211 0111111111
Q ss_pred C----chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 P----DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. +....+.+......... ................+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIKS----LPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHhh----cCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 11111111100000000 00000000000011235678999999999999999999999886
No 256
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5e-35 Score=316.02 Aligned_cols=275 Identities=20% Similarity=0.282 Sum_probs=196.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4788899999999999999999888899999986432 22335677899999999999999999984 4457899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|+||++ ++|.+++... ...+++..++.++.||++||+|||+. +++||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~-~~l~~~~~~~---------~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d 142 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSC---------NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLAD 142 (284)
T ss_pred EEEecCC-CCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECc
Confidence 9999996 5787776422 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.++...... .......++..|+|||++.+. .++.++|||||||++|||+||..||.........+..........
T Consensus 143 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07839 143 FGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220 (284)
T ss_pred cchhhccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 99998653221 112234578899999988765 478999999999999999999998653222211111111111000
Q ss_pred hh--hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HV--VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ...+... ...... ..........+.....+.++.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 221 TEESWPGVSKL--PDYKPY---PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ChHHhHHhhhc--cccccc---CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 0000000 000000 0000000000011134567889999999999999999999875
No 257
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.6e-34 Score=307.16 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=186.1
Q ss_pred CcccccceeeEEEEEEcCCC--eEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGK--TTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.||+|+||.||+|....+. ..+++|.++... ....+.+.+|+..++.++||||++++++|.. ....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEe
Confidence 36999999999999865432 346677665332 3456789999999999999999999999643 367899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.++++..... ....++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~~L~~~l~~~~~~------~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 76 YCELGDLKSYLSQEQWH------RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred cCCCCcHHHHHHhhhcc------cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccc
Confidence 99999999999643211 22467778889999999999999998 9999999999999999999999999998
Q ss_pred eecCCCCCcccccccccccccccccccCC-------CCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhh
Q 043900 794 RFLPLSPAQTSSIDAKGSIGYIAPEYGLG-------SEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 794 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 865 (953)
................++..|+|||++.+ ..++.++|||||||++|||++ |..||...... ......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~ 221 (268)
T cd05086 147 PSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-----EVLNHV 221 (268)
T ss_pred cccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence 64322211122233457889999998743 245789999999999999997 56677542211 111111
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
.........++.+.. ...+.+.+++..|| .+|++||+++||++.|.
T Consensus 222 ~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 222 IKDQQVKLFKPQLEL----------------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HhhcccccCCCccCC----------------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111111111111 12345788999999 67999999999998874
No 258
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-34 Score=311.24 Aligned_cols=264 Identities=23% Similarity=0.255 Sum_probs=202.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|+..+.||.|++|.||+|.+..+++.||+|.+.... ......+.+|++++++++||||++++++|... .....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 36888899999999999999999888899999987432 23456789999999999999999999987432 335689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|
T Consensus 78 lv~e~~~~~~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d 148 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK------RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCD 148 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEee
Confidence 99999999999988753221 133578899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||++........ ....++..|+|||.+.+..++.++||||+||++|||++|+.||...........+.........
T Consensus 149 fg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd06621 149 FGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP 224 (287)
T ss_pred cccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC
Confidence 999875432211 1334788999999999999999999999999999999999999754221111111111100000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... +.. ........++++.+++.+||+.+|++|||+.|+++
T Consensus 225 ~~~-----~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 225 NPE-----LKD----------------EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred chh-----hcc----------------CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000 000 00000123457899999999999999999999988
No 259
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.3e-35 Score=313.51 Aligned_cols=240 Identities=23% Similarity=0.352 Sum_probs=185.8
Q ss_pred CcccccceeeEEEEEEcCCCe-------EEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 637 NEIGVGSFGSVYKGILDQGKT-------TVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+.||+|+||.||+|.....+. .||+|.+........+.+.+|+.+++.++|||++++++++.. ++..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 469999999999999865433 488888865555556778899999999999999999999643 36789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc-----
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM----- 784 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~----- 784 (953)
+||||+++|+|.++++... ..+++..++.++.||+.|++|||+. +|+||||||+||+++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~ 143 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK---------NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGN 143 (258)
T ss_pred EEEecCCCCcHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCC
Confidence 9999999999999996322 2578999999999999999999999 9999999999999987765
Q ss_pred ---EEEeccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCC-CCCCCcccCCccHH
Q 043900 785 ---AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRK-KPVDSMFEGDMNLH 859 (953)
Q Consensus 785 ---~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~-~pf~~~~~~~~~~~ 859 (953)
++++|||.+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .||...... ...
T Consensus 144 ~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~ 215 (258)
T cd05078 144 PPFIKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKL 215 (258)
T ss_pred CceEEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHH
Confidence 69999998875432 1223478899999998874 5789999999999999999985 554421110 000
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
...... ..+ +.....++.+++.+||+.||++|||++++++.|
T Consensus 216 ~~~~~~----------~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 216 QFYEDR----------HQL----------------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHcc----------ccC----------------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 000 001124588999999999999999999999986
No 260
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.7e-34 Score=307.29 Aligned_cols=254 Identities=25% Similarity=0.403 Sum_probs=199.8
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|++.+.||+|+||.||+|.+..+. .||+|.++... ...+.+.+|++++++++|+||+++.+++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~-~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCc-cEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 467899999999999999999876554 79999886432 345678899999999999999999988532 5679
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
++|||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDE--------GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIAD 145 (260)
T ss_pred EEEEeCCCCcHHHHHHhCC--------ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECC
Confidence 9999999999999996422 23578889999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.+........ .......++..|+|||++.+..++.++|||||||++|+++| |+.||...... ............
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~ 222 (260)
T cd05073 146 FGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRM 222 (260)
T ss_pred CcceeeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCC
Confidence 999986643221 11122345678999999998889999999999999999999 99998642111 111111000000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
+.....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 223 ------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ------------------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ------------------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0001234568899999999999999999999999875
No 261
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.2e-35 Score=325.22 Aligned_cols=193 Identities=22% Similarity=0.354 Sum_probs=163.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
...+|++.+.||+|+||.||+|++..+++.||+|+.... ....|+.++++++||||+++++++.. ....
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS-----GAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe-----CCee
Confidence 445799999999999999999999988889999985422 23468999999999999999998643 4678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+. ++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 133 ~lv~e~~~-~~l~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 199 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTKR---------SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIG 199 (357)
T ss_pred EEEEEccC-CcHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEe
Confidence 99999994 6888887532 23589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPV 848 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf 848 (953)
|||.++..... .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 200 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 200 DLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 99999753221 1222345899999999999999999999999999999999965554
No 262
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.3e-35 Score=312.92 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=198.9
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++. .+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceEE
Confidence 4667788999999999999998888899999987432 344567889999999999999999999854 4477999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++||
T Consensus 80 v~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06642 80 IMEYLGGGSALDLLKP-----------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEEccCCCcHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccc
Confidence 9999999999998841 3578899999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|++....... .......++..|+|||++.+..++.++|||||||++|||++|+.||........ ... ....
T Consensus 146 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~----~~~~- 216 (277)
T cd06642 146 GVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFL----IPKN- 216 (277)
T ss_pred cccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhh----hhcC-
Confidence 9997654321 122234578899999999998999999999999999999999999864322110 000 0000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... ......+.++.+++.+||+.+|++||++.|+++.
T Consensus 217 -------~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 217 -------SPP------------------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -------CCC------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 000 0001234568899999999999999999999983
No 263
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.6e-35 Score=314.35 Aligned_cols=262 Identities=23% Similarity=0.296 Sum_probs=202.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-----ENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-----CCEEE
Confidence 46888899999999999999999888899999886432 3445788999999999999999999999643 37889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.. ...+++..+..++.+++.|+.|||+. .+++||||||+||++++++.++|+|
T Consensus 80 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d 147 (284)
T cd06620 80 MCMEFMDCGSLDRIYKK----------GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCD 147 (284)
T ss_pred EEEecCCCCCHHHHHHh----------ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEcc
Confidence 99999999999998852 23588999999999999999999963 2899999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||++....... .....|+..|+|||++.+..++.++|||||||++||+++|+.||.......... ..+..
T Consensus 148 ~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~------~~~~~ 217 (284)
T cd06620 148 FGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ------DDPMG 217 (284)
T ss_pred CCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh------hhhhH
Confidence 99987542211 123458999999999988899999999999999999999999997543221100 00000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
..+.......... ... ....++.++.+++.+||+.||++|||+.|+++..
T Consensus 218 ~~~~~~~~~~~~~-------------~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 218 ILDLLQQIVQEPP-------------PRL-PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHhhccC-------------CCC-CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0111110000000 000 0012456788999999999999999999999864
No 264
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.7e-35 Score=316.00 Aligned_cols=249 Identities=21% Similarity=0.269 Sum_probs=197.9
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
|.....||+|+||.||+|....++..||+|.++.......+.+.+|+..+++++|||++++++.+. .++..++||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEEE
Confidence 444577999999999999998888899999987655556677899999999999999999998854 347889999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|.+++. ...+++.++..++.||+.||+|||+. +++||||||+||++++++.++|+|||+
T Consensus 99 e~~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 99 EFLEGGALTDIVT-----------HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred eCCCCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 9999999999884 12478899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
+....... .......|+..|+|||...+..++.++||||||+++||+++|+.||...... ..........
T Consensus 165 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~------ 234 (292)
T cd06658 165 CAQVSKEV--PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRDNL------ 234 (292)
T ss_pred hhhccccc--ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcC------
Confidence 97553221 1222345889999999998889999999999999999999999998642111 0000000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
..... .....+..+.+++.+||..||++|||++|+++.
T Consensus 235 --~~~~~--------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 235 --PPRVK--------------------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --CCccc--------------------cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00000 001234468899999999999999999999974
No 265
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.8e-34 Score=308.39 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=202.5
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||.|+||.||+|.+..+++.||+|+++.. .....+.+..|++++++++|||++++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 478889999999999999999888889999998632 33445678899999999999999999987642 2345689
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEeecCCCCCeEecCCCc
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLH-----HDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
++|||+++++|.+++..... ....+++..++.++.|++.||+||| +. +++||||+|+||+++.++.
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~------~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~ 148 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK------ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNN 148 (265)
T ss_pred EEehhccCCCHHHHHHHHhh------cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCC
Confidence 99999999999999964321 1346899999999999999999999 66 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||.+........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||.... .......
T Consensus 149 ~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~ 221 (265)
T cd08217 149 VKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASK 221 (265)
T ss_pred EEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHH
Confidence 99999999987643221 1223458999999999999899999999999999999999999997532 1111111
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. ...... ......+.++.+++.+|++.+|++||++.||++.
T Consensus 222 ~---------~~~~~~------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 222 I---------KEGKFR------------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred H---------hcCCCC------------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 000000 0011334578899999999999999999999863
No 266
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-34 Score=314.44 Aligned_cols=278 Identities=22% Similarity=0.335 Sum_probs=196.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.++|++.+.||+|++|.||+|..+.+++.||+|.+.... ......+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeE
Confidence 467999999999999999999998888899999986432 222345678999999999999999999953 44789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~~-~L~~~~~~~~---------~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 145 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDDCG---------GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLA 145 (291)
T ss_pred EEEEecCCC-CHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEEC
Confidence 999999974 8998885321 2578999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC-
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL- 866 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~- 866 (953)
|||.++....... ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||..................
T Consensus 146 dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T cd07844 146 DFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGT 223 (291)
T ss_pred ccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCC
Confidence 9999875432111 1122346889999998876 45889999999999999999999999753311111111111000
Q ss_pred --CchhhhhccccccCCchhhhhccc-chhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 --PDHVVDIVDSTLLSDDEDLAVHGN-QRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 --~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
++......+. ........... ......... .......+.+++.+|++.+|++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 224 PTEETWPGVSSN---PEFKPYSFPFYPPRPLINHAP-RLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CChhhhhhhhhc---cccccccccccCChhHHHhCc-CCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000 00000000000 000000000 0011256789999999999999999999875
No 267
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.2e-34 Score=307.62 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=194.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|...+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 36888999999999999999998888899999986321 2334578899999999999999999998642 223
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...+++|||+++++|.+++.. ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~ 145 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA----------YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNV 145 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCE
Confidence 567899999999999999852 22478889999999999999999998 99999999999999999999
Q ss_pred EEeccccceecCCCCC-cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPA-QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||+++....... ........++..|+|||++.+..++.++||||+||++||+++|+.||...... .. ...
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~-~~~ 220 (266)
T cd06651 146 KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AA-IFK 220 (266)
T ss_pred EEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HH-HHH
Confidence 9999999976532111 11112345888999999999999999999999999999999999999743111 00 000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..... ... ..+....+.+.+++ +||..+|++||+++||++
T Consensus 221 ~~~~~--------~~~------------------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 221 IATQP--------TNP------------------QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HhcCC--------CCC------------------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00000 000 00112234566676 688899999999999975
No 268
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-34 Score=309.96 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=197.2
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch---------hhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---------GAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
+|.+...||+|++|.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 47788999999999999999988888999998863221 123568899999999999999999998643
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++++
T Consensus 78 --~~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~ 142 (267)
T cd06628 78 --ADHLNIFLEYVPGGSVAALLNN----------YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNK 142 (267)
T ss_pred --CCccEEEEEecCCCCHHHHHHh----------ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCC
Confidence 4678999999999999999952 23578889999999999999999998 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCc----ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccH
Q 043900 783 MMAHVSDFGLARFLPLSPAQ----TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNL 858 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~ 858 (953)
+.+||+|||.++........ .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||......
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---- 218 (267)
T cd06628 143 GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL---- 218 (267)
T ss_pred CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----
Confidence 99999999999876422111 1112234788999999999889999999999999999999999999753111
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..... ......+. .+...+..+.+++.+||+.||++||++.|+++
T Consensus 219 ~~~~~------~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 219 QAIFK------IGENASPE----------------------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHH------HhccCCCc----------------------CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00000 00000000 00123456889999999999999999999976
No 269
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.9e-34 Score=315.37 Aligned_cols=206 Identities=21% Similarity=0.311 Sum_probs=163.0
Q ss_pred cCcccccceeeEEEEEEcC--CCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 636 ANEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
..+||+|+||.||+|+..+ +.+.||+|.++... ....+.+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 3679999999999999764 44689999986432 23467889999999999999999998743 23467899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe----cCCCcEEEec
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL----DEEMMAHVSD 789 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~D 789 (953)
|++ ++|.+++....... .......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 81 YAE-HDLWHIIKFHRASK-ANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeC-CcHHHHHHhhhccc-cCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 986 47877775322211 111234589999999999999999999999 99999999999999 5667999999
Q ss_pred cccceecCCCCCc-ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 790 FGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 790 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
||+++........ .......||+.|+|||++.+. .++.++|||||||++|||+||++||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999876432211 122334689999999998764 5889999999999999999999999753
No 270
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=319.44 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=202.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
-|.++..||.|+||.||+|..++++...|.|++.....+..++++-|++++..++||+||++++.|+ ..+..+|.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceEEE
Confidence 4667788999999999999999988778899998888888899999999999999999999998843 34779999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
.|||.||-....+-. -.+.+++.++.-+++|++.||.|||+. .|||||||+.|||++-+|.++|+|||
T Consensus 108 iEFC~GGAVDaimlE---------L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE---------LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred EeecCCchHhHHHHH---------hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccc
Confidence 999999999888853 234799999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccccccccc-----CCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYG-----LGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
.+.... ..........|||+|||||+. .+.+|+.++||||||+++.||..+.+|....... +-.....-
T Consensus 176 VSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM----RVllKiaK 249 (1187)
T KOG0579|consen 176 VSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAK 249 (1187)
T ss_pred ccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH----HHHHHHhh
Confidence 986432 122333456799999999984 4668999999999999999999999997642211 00000000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+. +-.-.+......+.+++.+|+..||..||+++++++
T Consensus 250 SeP--------------------------PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 250 SEP--------------------------PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cCC--------------------------CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 000 001111233456889999999999999999999976
No 271
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-35 Score=303.62 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=206.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
..-|...+.||+|.|+.|-+|++--+++.||||++....- .....+.+|+.-|+-++|||||++|++ .+....
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccce
Confidence 3458888999999999999999999999999999975443 334678899999999999999999998 556688
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe-cCCCcEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL-DEEMMAH 786 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~k 786 (953)
.|+|+|.-++|+|.+|+-++.. .+.+.-..+++.||+.|+.|+|+. .+|||||||+||.+ ..-|-||
T Consensus 92 lyLiLELGD~GDl~DyImKHe~---------Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVK 159 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEE---------GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVK 159 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhc---------cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceE
Confidence 9999999999999999965443 588999999999999999999999 99999999999977 4668999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|.|||++-.+.++. .....+|+..|-|||++.|..|+ ++.||||+||++|.|++|++||....+.+
T Consensus 160 LTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------- 226 (864)
T KOG4717|consen 160 LTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------- 226 (864)
T ss_pred eeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----------
Confidence 99999998775443 23345799999999999999987 67899999999999999999998643322
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.-++|... .-+...+.+..++|..|+..||.+|.+.+||+.
T Consensus 227 ---TLTmImDCKY--------------------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 227 ---TLTMIMDCKY--------------------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ---hhhhhhcccc--------------------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1222222211 112255678899999999999999999999875
No 272
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-34 Score=309.77 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=199.0
Q ss_pred CCcccCcccccceeeEEEEEEcC-CCeEEEEEEeecc----------chhhHHHHHHHHHHHhh-cCCCCeeEEEeeecc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQ-GKTTVAVKVFNLL----------HHGAFKSFIAECNTLKN-IRHRNLVKILTACSG 699 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 699 (953)
+|++.+.||+|+||.||+|.+.. +++.||+|.+... ......++.+|+.++.+ ++||||++++++|.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47888999999999999999987 6678999988532 22334567788888865 69999999999864
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeE
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVL 778 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIl 778 (953)
.++..++||||+++++|.+++..... ....+++..++.++.|++.||.|||+ . +++||||+|+||+
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil 146 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNSLKE------KKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIM 146 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEE
Confidence 34789999999999999998853221 12358899999999999999999996 5 8999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccH
Q 043900 779 LDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNL 858 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~ 858 (953)
++.++.+||+|||.+....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 147 ~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~----- 218 (269)
T cd08528 147 LGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM----- 218 (269)
T ss_pred ECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----
Confidence 9999999999999998754332 22345588999999999998899999999999999999999999864211
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
....... .+....+.. ....++++.+++.+||+.||++||++.|+.++++
T Consensus 219 ~~~~~~~--------~~~~~~~~~------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 219 LSLATKI--------VEAVYEPLP------------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHH--------hhccCCcCC------------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111100 000000000 0023456889999999999999999999999875
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.6e-34 Score=305.34 Aligned_cols=250 Identities=19% Similarity=0.268 Sum_probs=200.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||++....+++.||+|.+... .....+.+.+|+.++++++||||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 488899999999999999999988889999998642 234456789999999999999999999985 3457899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d 144 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQR--------GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGD 144 (256)
T ss_pred EEEecCCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEee
Confidence 9999999999999885322 12578899999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+....... .......|++.|+|||+..+..++.++|||||||++|++++|+.||.... ............
T Consensus 145 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~ 217 (256)
T cd08218 145 FGIARVLNSTV--ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIRGS 217 (256)
T ss_pred ccceeecCcch--hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhcCC
Confidence 99998654321 11223457889999999999999999999999999999999999986421 111111110000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ......+.++.+++.+||+.+|++||++.||++
T Consensus 218 --------~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 218 --------YP-------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --------CC-------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 00 001123456899999999999999999999986
No 274
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.5e-35 Score=321.29 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=172.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|.+.+.||+|+||+||+|++..+++.||+|++... .......+.+|..++..++|++|+++++++. ..+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-----~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-----DENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCCE
Confidence 4789999999999999999999988889999998642 2233456788999999999999999999853 4578
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~---------~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl 143 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKF---------EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRL 143 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEE
Confidence 99999999999999999632 12578889999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 144 ADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred EeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 99999987643222 12223469999999999875 4678999999999999999999999964
No 275
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=288.26 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=205.2
Q ss_pred HhhcCCccc-CcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCC
Q 043900 628 NATDGFASA-NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 628 ~~~~~~~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 705 (953)
..+++|++. ++||-|-.|.|-.+..+.+++.+|+|++.. .....+|++.--.. .|||||.+++++... +...
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~r 131 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENS-YQGR 131 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCc
Confidence 356677664 679999999999999999999999999852 23456777765444 699999999998665 6777
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC---C
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE---E 782 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~ 782 (953)
....+|||.|+||.|...++..+. ..+++.++.+|+.||+.|+.|||+. .|+||||||+|+|... +
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~--------~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~n 200 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGD--------QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPN 200 (400)
T ss_pred eeeEeeeecccchHHHHHHHHccc--------ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCC
Confidence 888999999999999999975543 3799999999999999999999999 9999999999999964 4
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
-.+||+|||+|+.-.. .......+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||.+.....
T Consensus 201 a~lKLtDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a------- 270 (400)
T KOG0604|consen 201 APLKLTDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------- 270 (400)
T ss_pred cceEecccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------
Confidence 5899999999986532 233345568999999999999999999999999999999999999998643221
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
++.....-+... .+ ..-.+++...+++..++++.+++.+|.+|.|+.|++.
T Consensus 271 ---ispgMk~rI~~g---qy------------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 271 ---ISPGMKRRIRTG---QY------------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ---CChhHHhHhhcc---Cc------------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111111111100 00 0011234567788999999999999999999999875
No 276
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-35 Score=310.69 Aligned_cols=253 Identities=20% Similarity=0.287 Sum_probs=196.1
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 706 (953)
...|++.+.||+||.+.||++...+.+ .||+|++. ..+......|.+|+..|.++ .|.+|+++++|-. .++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-----~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-----TDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-----cCc
Confidence 346899999999999999999987765 67777664 44556678899999999999 5999999999943 358
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..||||||= ..||..++++.... ++...++.+..|++.|+.++|.+ ||||.||||.|+|+-. |.+|
T Consensus 434 ~lYmvmE~G-d~DL~kiL~k~~~~---------~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LK 499 (677)
T KOG0596|consen 434 YLYMVMECG-DIDLNKILKKKKSI---------DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLK 499 (677)
T ss_pred eEEEEeecc-cccHHHHHHhccCC---------CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEE
Confidence 899999976 56999999754432 33237888999999999999999 9999999999999954 6799
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCC-----------CCCcccchHHHHHHHHHHHhCCCCCCCcccCC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-----------EVSINGDVYSYGILLLELVTRKKPVDSMFEGD 855 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv~slG~vl~elltg~~pf~~~~~~~ 855 (953)
|+|||.|..+..+.........+||+.||+||.+... +.++++||||+||++|+|+.|+.||.....
T Consensus 500 LIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-- 577 (677)
T KOG0596|consen 500 LIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-- 577 (677)
T ss_pred eeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--
Confidence 9999999988776666666677899999999987543 256889999999999999999999975211
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.|++ +..+.++...-.+.+ . ....++.++|+.||++||.+|||..|+++
T Consensus 578 ----~~aK------l~aI~~P~~~Iefp~-------------~----~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 578 ----QIAK------LHAITDPNHEIEFPD-------------I----PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ----HHHH------HHhhcCCCccccccC-------------C----CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1111 111122111000000 0 00123889999999999999999999986
No 277
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.8e-34 Score=310.26 Aligned_cols=261 Identities=23% Similarity=0.305 Sum_probs=203.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc-CCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY-QGND 706 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~-~~~~ 706 (953)
..++|++.+.||+|++|.||+|.+..+++.||+|++..... ..+.+.+|+.+++++ +|+||+++++++..... ....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46789999999999999999999988888999999875443 346788999999999 79999999999865422 3356
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~ 153 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRK------KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVK 153 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEE
Confidence 78999999999999998864321 124688999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCC-----CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-----SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
|+|||.+...... ........|+..|+|||++.. ..++.++|||||||++|++++|+.||....... .....
T Consensus 154 l~d~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~ 230 (275)
T cd06608 154 LVDFGVSAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKI 230 (275)
T ss_pred ECCCccceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHh
Confidence 9999999865322 122233458899999998753 346789999999999999999999996421110 00000
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ... .........+.++.+++.+||..||++|||++|+++
T Consensus 231 ~~----~~~-------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PR----NPP-------------------------PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hc----cCC-------------------------CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 000 000111124567889999999999999999999976
No 278
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-34 Score=311.32 Aligned_cols=255 Identities=24% Similarity=0.304 Sum_probs=198.1
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||+|+||.||+|.+...++.||+|.++.. .......+.+|++++++++||||+++++++. .+...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 3688899999999999999999988889999998743 3344567889999999999999999999853 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|..++.... ....+++..+..++.|++.|+.|||+. .+++||||||+||+++.++.+||+|
T Consensus 76 lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGV-------ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred EEEeecCCCCHHHHHHhcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEee
Confidence 9999999999999885321 123689999999999999999999963 2899999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCC------CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE------VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~ 863 (953)
||.+...... ......++..|+|||++.+.. ++.++|||||||++|||++|+.||...... .......
T Consensus 147 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~ 220 (286)
T cd06622 147 FGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQLS 220 (286)
T ss_pred cCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHHH
Confidence 9999765322 122335788999999985543 588999999999999999999999642111 0000000
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
...+... ...+..++.++.+++.+||+.+|++||++++++..
T Consensus 221 --------~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 221 --------AIVDGDP-------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred --------HHhhcCC-------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0000000 00011345678899999999999999999999873
No 279
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.4e-34 Score=309.24 Aligned_cols=254 Identities=24% Similarity=0.322 Sum_probs=201.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-----NGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-----CCEEE
Confidence 36788899999999999999999888899999987543 3455678899999999999999999998643 37899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
+|+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||++++++.++|+
T Consensus 76 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~ 143 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ---------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLC 143 (265)
T ss_pred EEEEecCCCcHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 9999999999999986322 368889999999999999999999 7 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+........ ....++..|+|||.+.+..++.++||||||+++|++++|+.||....................
T Consensus 144 d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd06605 144 DFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE 219 (265)
T ss_pred ecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC
Confidence 9999875532111 115588899999999999999999999999999999999999975432211111111111100
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ..... ....+.++.+++.+||..||++|||+.|++.
T Consensus 220 ~--------~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 220 P--------PPRLP------------------SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred C--------CCCCC------------------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 0 00000 0014567899999999999999999999975
No 280
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.8e-35 Score=290.03 Aligned_cols=210 Identities=24% Similarity=0.328 Sum_probs=175.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCC----eEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGK----TTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
....|+....||+|.||.||+|...++. +.+|+|.++... .+......+|+..++.++|||++.+..++..
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~--- 98 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS--- 98 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc---
Confidence 3456899999999999999999765543 268999997442 2334567899999999999999999988643
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.+..+++++||.+. +|.+.++..+.. ..+.++...+..|+.||+.|+.|||++ -|+||||||.||||..+
T Consensus 99 -~d~~v~l~fdYAEh-DL~~II~fHr~~-----~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgd 168 (438)
T KOG0666|consen 99 -HDKKVWLLFDYAEH-DLWHIIKFHRAS-----KAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGD 168 (438)
T ss_pred -cCceEEEEehhhhh-hHHHHHHHhccc-----hhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEecc
Confidence 25789999999976 999999765543 235789999999999999999999999 89999999999999877
Q ss_pred ----CcEEEeccccceecCCCCCc-ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 783 ----MMAHVSDFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 783 ----~~~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
|.|||+|||+|+.+...-.. .....++.|.+|+|||.+.|. .|+.+.||||.||++.||+|-.+.|.+.
T Consensus 169 gperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 169 GPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred CCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 89999999999988543222 234456789999999998886 5899999999999999999999888753
No 281
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-34 Score=319.73 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=170.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.++||+|+||+||+|+...+++.||+|++... .......+.+|+.++..++|++|+++++++. +.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-----DENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cCCE
Confidence 4689999999999999999999998889999998632 2223445788999999999999999998853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~---------~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL 143 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKF---------EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRL 143 (332)
T ss_pred EEEEEeccCCCcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 99999999999999999632 12578889999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccC-----CCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-----GSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
+|||++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 144 ~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 144 ADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred eecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 99999976532221 1222346999999999976 34688999999999999999999999974
No 282
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.6e-35 Score=314.20 Aligned_cols=277 Identities=22% Similarity=0.295 Sum_probs=199.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ ..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 46889999999999999999999888899999985322 22346788999999999999999999985 345789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++++++.++... ...+++.+++.++.|+++|++|||+. +++||||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~ 142 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKY----------PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLC 142 (286)
T ss_pred EEEEecCCccHHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEE
Confidence 999999999999887642 22488999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH--hh
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR--MA 865 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~--~~ 865 (953)
|||++....... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....... ..
T Consensus 143 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~ 219 (286)
T cd07846 143 DFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGN 219 (286)
T ss_pred eeeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCC
Confidence 999998654322 22223457899999998875 357889999999999999999999986422111 0011000 00
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.........+......... .................+..+.+++.+||+.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 220 LIPRHQEIFQKNPLFAGMR---LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CchhhHHHhccchHhhccc---cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 1111111110000000000 00000000000111234677999999999999999999999875
No 283
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.9e-34 Score=304.44 Aligned_cols=252 Identities=27% Similarity=0.465 Sum_probs=198.9
Q ss_pred CcccCcccccceeeEEEEEEcCCC----eEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 633 FASANEIGVGSFGSVYKGILDQGK----TTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
+++.+.||.|+||.||+|.+...+ ..||+|+++..... ..+.+..|++.++.++|+||+++++++.. .+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-----EEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-----CCe
Confidence 356789999999999999998755 78999999754433 56788999999999999999999998643 367
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.+++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l 144 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP--------KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKI 144 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh--------ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEE
Confidence 9999999999999999863221 1289999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||.++........... ...+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ........
T Consensus 145 ~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~ 218 (258)
T smart00219 145 SDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-----EEVLEYLK 218 (258)
T ss_pred cccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHh
Confidence 999999876543222111 2337789999999988889999999999999999999 7888764211 11111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
... . .......+.++.+++.+|+..||++|||+.|+++.|
T Consensus 219 ~~~--------~-------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 KGY--------R-------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCC--------C-------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 0 000012455789999999999999999999998764
No 284
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.4e-34 Score=304.52 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=198.7
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|+..+.||+|+||.||+|....+++.||+|.+... .......+.+|++++++++|||++++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 478889999999999999999988899999998643 234467888999999999999999999884 3447889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC-CcEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE-MMAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~ 788 (953)
+||||+++++|.+++.... ...+++..+..++.|+++|++|||++ +++||||+|+||+++++ +.+||+
T Consensus 76 lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~ 144 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRC--------NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIG 144 (256)
T ss_pred EEEecCCCCCHHHHHHHhc--------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 9999999999999996422 23588999999999999999999999 99999999999999855 468999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......
T Consensus 145 d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~--- 213 (256)
T cd08220 145 DFGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLKI--- 213 (256)
T ss_pred cCCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHHH---
Confidence 999998764322 222345888999999999888999999999999999999999998642111 111100
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
....... .....+.++.+++.+||+.+|++|||+.|+++
T Consensus 214 -----~~~~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 214 -----MSGTFAP-------------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -----HhcCCCC-------------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0000000 00023456889999999999999999999986
No 285
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.8e-34 Score=308.57 Aligned_cols=263 Identities=22% Similarity=0.361 Sum_probs=201.9
Q ss_pred cCCcccCcccccceeeEEEEEEcC-----CCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ-----GKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 704 (953)
++|++.+.||+|+||.||+|+.+. +.+.||+|.+...... ....+.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-----
Confidence 468889999999999999999753 3457999988654433 45778999999999999999999998643
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+++|+|.+++....... .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~-~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKD-EKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccc-ccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCc
Confidence 367899999999999999996443211 111223689999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 863 (953)
++++|||++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||...... .......
T Consensus 156 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~ 232 (275)
T cd05046 156 VKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQ 232 (275)
T ss_pred EEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHH
Confidence 9999999987543221 112223346788999999988889999999999999999999 78888642211 1111000
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
... .. +.....++.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 233 ---~~~--------~~------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 ---AGK--------LE------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ---cCC--------cC------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000 00 0000123457899999999999999999999999875
No 286
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.8e-34 Score=305.09 Aligned_cols=251 Identities=27% Similarity=0.409 Sum_probs=196.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
.+|++.+.||+|+||.||+|.+..+ +.+|+|.++.... ....+.+|++++++++||+++++++++. .....++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEK-RKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCC-CeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceEE
Confidence 4688889999999999999998754 4799998864322 3457889999999999999999999854 3467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 77 v~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 144 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQ---------RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDF 144 (256)
T ss_pred EEEcCCCCcHHHHHHhC---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCC
Confidence 99999999999998532 12478899999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ....... ..
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~-~~ 217 (256)
T cd05112 145 GMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVVETIN-AG 217 (256)
T ss_pred cceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHh-CC
Confidence 99986543221 11122335678999999998899999999999999999998 99998642211 1111100 00
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
. ....+ ...+.++.+++.+||+.+|++|||+.|+++.|
T Consensus 218 ~-~~~~~-------------------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 218 F-RLYKP-------------------------RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred C-CCCCC-------------------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0 00000 01235689999999999999999999999886
No 287
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3e-34 Score=306.58 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=195.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc------hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH------HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+|++.+.||+|+||+||+|.... ++.||+|.++... ......+.+|++++++++|+||++++++|. +.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQ-GQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEcC-CCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cC
Confidence 47889999999999999998754 4589999886322 223456889999999999999999999964 34
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 141 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF----------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGII 141 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeE
Confidence 7899999999999999998521 2478899999999999999999998 99999999999999999999
Q ss_pred EEeccccceecCCCCC----cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 786 HVSDFGLARFLPLSPA----QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
+|+|||.+........ ........|+..|+|||++.+..++.++|||||||++||+++|..||....... .....
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~ 220 (265)
T cd06631 142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYI 220 (265)
T ss_pred EeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHh
Confidence 9999999976532111 111223458899999999999899999999999999999999999996432111 00000
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... .. . .+.. ....+.++.+++.+||+.+|++||++.|+++
T Consensus 221 ~~~---~~---~-~~~~----------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GAH---RG---L-MPRL----------------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhc---cC---C-CCCC----------------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 00 0 0000 0123456889999999999999999999875
No 288
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-35 Score=294.91 Aligned_cols=276 Identities=20% Similarity=0.300 Sum_probs=224.1
Q ss_pred HHHHHhhcCCcccCcccccceeeEEEEEEcCCC-----eEEEEEEeec-cchhhHHHHHHHHHHHhhcCCCCeeEEEeee
Q 043900 624 QNLYNATDGFASANEIGVGSFGSVYKGILDQGK-----TTVAVKVFNL-LHHGAFKSFIAECNTLKNIRHRNLVKILTAC 697 (953)
Q Consensus 624 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 697 (953)
+++.....+++....+-+|.||.||+|.+++.+ +.|-+|.++. .++-....+..|...+....|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 334444566777788999999999999886543 2366676653 3344567788999999999999999999998
Q ss_pred cccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 043900 698 SGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNV 777 (953)
Q Consensus 698 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 777 (953)
.+ +.+..++++.++.-|+|..|+..++..+ ....+.++..+...+|.|++.|++|||++ +|||.||.++|.
T Consensus 357 ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~--~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNC 427 (563)
T KOG1024|consen 357 IE----DYATPFVLYPATGVGNLKSFLQICRGDD--PSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNC 427 (563)
T ss_pred ee----ccCcceEEEeccCcchHHHHHHHhccCC--CccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcc
Confidence 54 4577899999999999999998776432 23455788899999999999999999999 999999999999
Q ss_pred EecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCc
Q 043900 778 LLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDM 856 (953)
Q Consensus 778 ll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~ 856 (953)
+||+..+|||+|=.+++..-+.+...-....-.+..||+||.+....|+.++|||||||++|||+| |+.||.+....+
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 999999999999999998877766666666667889999999999999999999999999999999 999987532211
Q ss_pred cHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 857 NLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
+..+ + ..+.|..++..||++++.+|.-||+.+|++||+++|++..|.+.
T Consensus 507 -m~~y------------l------------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 507 -MEHY------------L------------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -HHHH------------H------------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1111 1 11234455568999999999999999999999999999999988
Q ss_pred HHHh
Q 043900 937 KNIL 940 (953)
Q Consensus 937 ~~~~ 940 (953)
...+
T Consensus 556 ~~ql 559 (563)
T KOG1024|consen 556 HTQL 559 (563)
T ss_pred HHHH
Confidence 6543
No 289
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.8e-34 Score=308.08 Aligned_cols=255 Identities=22% Similarity=0.317 Sum_probs=196.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc----------hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH----------HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD 701 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 701 (953)
+|.+.+.||+|+||.||+|....+++.||+|.++... ....+.+.+|+.++++++|||++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 4778899999999999999998888899999885321 112346788999999999999999999864
Q ss_pred cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC
Q 043900 702 YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE 781 (953)
Q Consensus 702 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 781 (953)
..+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~ 143 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTY----------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDA 143 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcC
Confidence 347789999999999999998532 3588899999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCcccccccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 782 EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE--VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 782 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
++.++++|||.++...............++..|+|||.+.... ++.++||||||+++||+++|..||...... .
T Consensus 144 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~ 219 (272)
T cd06629 144 DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----A 219 (272)
T ss_pred CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----H
Confidence 9999999999997653222222223345889999999987654 889999999999999999999998632111 1
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... .........+.. .....++.++.+++.+||..||++|||++||++
T Consensus 220 ~~~~-~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 220 AMFK-LGNKRSAPPIPP----------------------DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHH-hhccccCCcCCc----------------------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1110 000000000000 001134567889999999999999999999886
No 290
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.6e-34 Score=306.40 Aligned_cols=259 Identities=23% Similarity=0.296 Sum_probs=202.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||.|+||+||+|....++..||+|++.... ....+.+.+|++.++.++|+|++++++.+. .+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 46899999999999999999998888899999986332 335678899999999999999999998853 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|
T Consensus 76 iv~e~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~d 145 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP-------RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIAD 145 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 99999999999999963221 13588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcc--cccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQT--SSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||.+..+....... ......|+..|+|||++... .++.++|||||||++|||++|+.||....... .........
T Consensus 146 f~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~- 223 (267)
T cd06610 146 FGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND- 223 (267)
T ss_pred cchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-
Confidence 99997665432221 22334588999999998777 78999999999999999999999997532211 111111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+ ..... .......+.++.+++.+||+.||++|||++|+++
T Consensus 224 ~--------~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 P--------PSLET-----------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred C--------CCcCC-----------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 00000 0001134567889999999999999999999986
No 291
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.5e-34 Score=311.32 Aligned_cols=251 Identities=21% Similarity=0.275 Sum_probs=201.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++|||+++++++|. ..+..++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEEE
Confidence 57899999999999999999988777899999987555555677889999999999999999999864 3467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
|+||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 94 v~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred EEecCCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccC
Confidence 9999999999999852 2478889999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|.+........ ......+++.|+|||.+.+..++.++||||||+++||+++|+.||......+.... ...
T Consensus 160 g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~~------- 229 (293)
T cd06647 160 GFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT------- 229 (293)
T ss_pred cceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hhc-------
Confidence 99876543221 22234588899999999888899999999999999999999999975322110000 000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... .........+..+.+++.+||+.+|++||++.+++..
T Consensus 230 ----~~~------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 230 ----NGT------------------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ----CCC------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0000111234568899999999999999999999864
No 292
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.4e-34 Score=305.07 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=195.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
++|++.+.||+|+||.||+|... ++.||+|.++... ....+.+|+.++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYT--GQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEecccC--CCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 46889999999999999999753 4579999986432 34678899999999999999999998632 34689
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 76 v~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Df 144 (254)
T cd05083 76 VMELMSKGNLVNFLRTRG--------RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDF 144 (254)
T ss_pred EEECCCCCCHHHHHHhcC--------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCC
Confidence 999999999999996432 22578999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.+....... .....+..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 145 g~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~----- 209 (254)
T cd05083 145 GLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVKEC----- 209 (254)
T ss_pred ccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHH-----
Confidence 9997643211 12234578999999988899999999999999999998 99998643211 11100
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQS 935 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 935 (953)
+....... ....++.++.+++.+||+.+|++||+++++++.|++
T Consensus 210 ----~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 210 ----VEKGYRME------------------PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----HhCCCCCC------------------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00000000 001234678899999999999999999999998863
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-34 Score=313.62 Aligned_cols=257 Identities=20% Similarity=0.243 Sum_probs=198.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|.+...++.||+|.+.... ......+.+|+++++.++||||+++++.+. .++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCE
Confidence 36888999999999999999999998899999986432 233457889999999999999999998853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l 142 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN----------IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKL 142 (305)
T ss_pred EEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEE
Confidence 8999999999999999952 23578999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCC-------------cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 788 SDFGLARFLPLSPA-------------QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 788 ~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
+|||.++....... ........++..|+|||.+.+..++.++|||||||++||+++|..||.+....
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999864211100 00111234788999999998889999999999999999999999998642111
Q ss_pred CccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 855 DMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
........... ..+ ......+.++.+++.+||+.||++||++.++.+.++
T Consensus 223 -----~~~~~~~~~~~---~~~----------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 223 -----ELFGQVISDDI---EWP----------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred -----HHHHHHHhccc---CCC----------------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 11111000000 000 000023456889999999999999999766666554
Q ss_pred H
Q 043900 935 S 935 (953)
Q Consensus 935 ~ 935 (953)
.
T Consensus 273 ~ 273 (305)
T cd05609 273 H 273 (305)
T ss_pred C
Confidence 4
No 294
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=317.30 Aligned_cols=288 Identities=23% Similarity=0.267 Sum_probs=208.6
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~l 710 (953)
|...+.||+||||.||+|+.+.+++.||||.++.. .....+...+|++++++++|||||+++++-.+.. +-......+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 45567899999999999999999999999999743 3345677889999999999999999998833221 111456789
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec--CCC--cEE
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD--EEM--MAH 786 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~k 786 (953)
|||||.+|||..++.... ....+++.+.+.+..+++.||.|||++ |||||||||.||++- .+| ..|
T Consensus 95 vmEyC~gGsL~~~L~~PE-------N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyK 164 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPE-------NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYK 164 (732)
T ss_pred EEeecCCCcHHHHhcCcc-------cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEe
Confidence 999999999999996433 345799999999999999999999999 999999999999983 334 689
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.|+..+.+. .....+||..|.|||+... +.|+..+|.|||||++||..||..||-.... .....+..+..
T Consensus 165 LtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~-pk~~~~~~~~~ 240 (732)
T KOG4250|consen 165 LTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG-PKNNKEIMWHI 240 (732)
T ss_pred eecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC-ccccchhhhhh
Confidence 99999999875433 5556789999999999984 7889999999999999999999999976322 22111111111
Q ss_pred C---CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC--CHHHHHHHHHHHHHHh
Q 043900 866 L---PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM--NMTNVVRQLQSIKNIL 940 (953)
Q Consensus 866 ~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--t~~evl~~L~~i~~~~ 940 (953)
. +..+.-...+...+. .......+. -..........+..++..++.++|++|- ...+....+.+|.+..
T Consensus 241 ~tkkp~~v~i~~~~~eNgp---v~~s~~lP~---p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~ 314 (732)
T KOG4250|consen 241 ITKKPSGVAIGAQEEENGP---VEWSSTLPQ---PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLK 314 (732)
T ss_pred hccCCCceeEeeecccCCc---eeeeccCCC---cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhh
Confidence 1 111111111111000 000000000 0011112234466777788889999998 8888888888876553
No 295
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.8e-34 Score=312.94 Aligned_cols=249 Identities=22% Similarity=0.276 Sum_probs=197.1
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
|.....||+|+||.||+|.+..+++.||+|+++.......+.+.+|+.+++.++|||++++++++. .++..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 334557999999999999998888899999997555555677889999999999999999999854 347889999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|.+++. ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 98 e~~~~~~L~~~~~-----------~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~ 163 (297)
T cd06659 98 EFLQGGALTDIVS-----------QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGF 163 (297)
T ss_pred ecCCCCCHHHHHh-----------hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechh
Confidence 9999999998874 13578999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
+....... .......|+..|+|||++.+..++.++|||||||++|||++|+.||...... .............
T Consensus 164 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~--- 236 (297)
T cd06659 164 CAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSPPPK--- 236 (297)
T ss_pred Hhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCC---
Confidence 97553221 1223345889999999999889999999999999999999999998642111 0000000000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
. ......+.++.+++.+||+.+|++||+++|+++.
T Consensus 237 -----~--------------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 237 -----L--------------------KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -----c--------------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 0000223458899999999999999999999984
No 296
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.6e-34 Score=303.82 Aligned_cols=253 Identities=20% Similarity=0.218 Sum_probs=195.8
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 46889999999999999999999888899999885321 23346788899999999999999999985322 23
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 145 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKS----------YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNV 145 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCE
Confidence 467899999999999999852 12478888999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 146 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~ 221 (265)
T cd06652 146 KLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKI 221 (265)
T ss_pred EECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHH
Confidence 99999999865322111 1122345888999999998888999999999999999999999998642111 111000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..... . ...+......+.+++.+|+. +|++||+++|+++
T Consensus 222 ~~~~~-----~----------------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 222 ATQPT-----N----------------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred hcCCC-----C----------------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00000 0 00111334567788899984 9999999999875
No 297
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.4e-34 Score=308.38 Aligned_cols=274 Identities=21% Similarity=0.250 Sum_probs=200.6
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++|||++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 4888999999999999999998888899999997443 334567899999999999999999999854 357889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+ +++|.+++.... ..+++.+++.++.||++||+|||+. +++|+||||+||+++.++.++|+|
T Consensus 76 ~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~d 142 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE---------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIAD 142 (286)
T ss_pred EEeccc-CCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEee
Confidence 999999 999999985322 3589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
||.+........ .......++..|+|||++.+. .++.++||||+|+++|||++|.+||...... ............
T Consensus 143 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~~~~~~~~ 219 (286)
T cd07832 143 FGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI--EQLAIVFRTLGT 219 (286)
T ss_pred eeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH--HHHHHHHHHcCC
Confidence 999987643321 122334588999999998654 4689999999999999999998887643221 111111111110
Q ss_pred h----hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 H----VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ..+..+. ..............+ ......+.+.++.+++.+|++.+|++|||++++++
T Consensus 220 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 220 PNEETWPGLTSL---PDYNKITFPESKPIP--LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CChHHHhhccCc---chhhcccCCCCCcch--HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0000000 000000000000000 00001133478999999999999999999999976
No 298
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.6e-35 Score=322.24 Aligned_cols=241 Identities=22% Similarity=0.218 Sum_probs=183.3
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhc---CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNI---RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
||+|+||+||+|++..+++.||+|++.... ......+..|..++... +||+|+++++++ ......++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 799999999999999988899999986322 22233455666666655 699999999885 3447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 76 e~~~~g~L~~~l~~----------~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (330)
T cd05586 76 DYMSGGELFWHLQK----------EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGL 142 (330)
T ss_pred cCCCCChHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCc
Confidence 99999999988852 23588999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...........
T Consensus 143 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~-- 213 (330)
T cd05586 143 SKANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGK-- 213 (330)
T ss_pred CcCCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCC--
Confidence 97542211 122345699999999998765 489999999999999999999999965211 11111100000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC----HHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN----MTNVVR 931 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl~ 931 (953)
..+.. ...++++.+++.+||+.||++||+ +.|+++
T Consensus 214 ----~~~~~---------------------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 214 ----VRFPK---------------------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ----CCCCC---------------------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 00000 012446789999999999999984 555544
No 299
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.4e-34 Score=309.47 Aligned_cols=275 Identities=27% Similarity=0.337 Sum_probs=197.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|+..+.||+|++|.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++. +++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----cCCcEE
Confidence 4788899999999999999999888899999986332 223457889999999999999999999853 457899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+. ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|
T Consensus 76 ~v~e~~~-~~l~~~~~~~~--------~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~d 143 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASP--------LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLAD 143 (284)
T ss_pred EEeeccc-cCHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEee
Confidence 9999995 68888885322 23589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh-CC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE-VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA-LP 867 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~-~~ 867 (953)
||.+....... .......++..|+|||++.+.. ++.++||||||+++|||+||+.||....+.+ ...+..... .+
T Consensus 144 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~ 220 (284)
T cd07860 144 FGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTP 220 (284)
T ss_pred ccchhhcccCc--cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 99997653221 1122334688999999887654 5889999999999999999999997532211 111111111 11
Q ss_pred ch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ....... . +.... ...... .............++.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~~~~~-~-~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 221 DEVVWPGVTS-L-PDYKP-SFPKWA--RQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred ChhhhhhhhH-H-HHHHh-hccccc--ccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 10 0000000 0 00000 000000 00000001123456889999999999999999999975
No 300
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.1e-34 Score=304.49 Aligned_cols=239 Identities=24% Similarity=0.418 Sum_probs=187.7
Q ss_pred CcccccceeeEEEEEEcCCC----------eEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 637 NEIGVGSFGSVYKGILDQGK----------TTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
+.||+|+||.||+|.+...+ ..|++|+++..... ...+.+|+.++++++||||++++++|.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46999999999999998765 35888887644333 6788899999999999999999998642 4
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC---
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM--- 783 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 783 (953)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~ 141 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK---------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNE 141 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCcccc
Confidence 5689999999999999986322 1588999999999999999999998 999999999999999887
Q ss_pred ----cEEEeccccceecCCCCCcccccccccccccccccccCCC--CCCcccchHHHHHHHHHHHh-CCCCCCCcccCCc
Q 043900 784 ----MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVT-RKKPVDSMFEGDM 856 (953)
Q Consensus 784 ----~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~ 856 (953)
.+||+|||.+..... .....++..|+|||++.+. .++.++||||||+++||+++ |..||......
T Consensus 142 ~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-- 213 (259)
T cd05037 142 GYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-- 213 (259)
T ss_pred CCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--
Confidence 799999999986532 1223467789999998876 78999999999999999999 57777543211
Q ss_pred cHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 857 NLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
....+.. .....+. ....++.+++.+||..+|.+|||+.|+++.|+
T Consensus 214 ~~~~~~~-----------~~~~~~~---------------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 214 EKERFYQ-----------DQHRLPM---------------------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHh-----------cCCCCCC---------------------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111100 0000000 00146889999999999999999999998863
No 301
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.6e-34 Score=313.40 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=199.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch---hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|+..+.||+|+||.||+|....+++.||+|.+..... ...+.+..|+++++.++||||+++++++. ....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-----TETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-----cCCE
Confidence 368889999999999999999998888999999964332 24567889999999999999999999853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+.+++|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~--------~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l 144 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQP--------GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIML 144 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCC--------CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEE
Confidence 999999999999999986322 23689999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCc---------------------------ccccccccccccccccccCCCCCCcccchHHHHHHHHH
Q 043900 788 SDFGLARFLPLSPAQ---------------------------TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLE 840 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~e 840 (953)
+|||++......... .......|+..|+|||++.+..++.++||||||+++|+
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 145 SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 999998755322110 01112357889999999999999999999999999999
Q ss_pred HHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCC
Q 043900 841 LVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESP 920 (953)
Q Consensus 841 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 920 (953)
|++|+.||....... .+. .+.+.... .......+.++.+++.+||+.||
T Consensus 225 l~~g~~pf~~~~~~~-~~~------------~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p 273 (316)
T cd05574 225 MLYGTTPFKGSNRDE-TFS------------NILKKEVT------------------FPGSPPVSSSARDLIRKLLVKDP 273 (316)
T ss_pred HhhCCCCCCCCchHH-HHH------------HHhcCCcc------------------CCCccccCHHHHHHHHHHccCCH
Confidence 999999997532110 010 00100000 00001145679999999999999
Q ss_pred CCCCC----HHHHHH
Q 043900 921 GDRMN----MTNVVR 931 (953)
Q Consensus 921 ~~RPt----~~evl~ 931 (953)
++||| ++|++.
T Consensus 274 ~~R~s~~~~~~~ll~ 288 (316)
T cd05574 274 SKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHCCCchhhHHHHHc
Confidence 99999 666665
No 302
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.9e-34 Score=308.13 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=191.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHH-HhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNT-LKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+..|+.. ++..+|||++++++++. .+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 46889999999999999999999888999999987432 2233455566665 56668999999999964 34678
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++ |+|.+++..... ....+++..++.++.|++.|++|||++ .+++||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~ 146 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYD------KGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLC 146 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhcc------CCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEe
Confidence 99999996 688887753221 124689999999999999999999974 289999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCC----CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG----SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
|||.+....... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 147 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~-- 218 (283)
T cd06617 147 DFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLK-- 218 (283)
T ss_pred eccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHH--
Confidence 999998653221 1122457889999998765 45688999999999999999999998642211 11110
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........... ...++.++.+++.+||+.+|++||+++++++
T Consensus 219 -------~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 219 -------QVVEEPSPQLP------------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -------HHHhcCCCCCC------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000000 0023456889999999999999999999987
No 303
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.2e-34 Score=302.87 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=197.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-----HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|+..+.||+|+||.||+|....+++.||+|.+.... ....+.+.+|++++++++|+||+++++++. .+.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 4778899999999999999998777899999986433 234567899999999999999999999854 347
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~k 142 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK----------YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVK 142 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 78999999999999999852 22478999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCC-CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE-VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.+....... ......++..|+|||.+.... ++.++|+||||+++|++++|+.||....... ......
T Consensus 143 l~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~ 215 (258)
T cd06632 143 LADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA----AVFKIG 215 (258)
T ss_pred EccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH----HHHHHH
Confidence 99999998654322 123345889999999987766 8999999999999999999999997532110 000000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...... .......+.+.+++.+||+.+|++||++.++++
T Consensus 216 ~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 216 RSKELP---------------------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred hcccCC---------------------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000000 000123456789999999999999999999975
No 304
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.9e-34 Score=316.13 Aligned_cols=285 Identities=19% Similarity=0.256 Sum_probs=203.8
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.++|++.+.||+|+||.||+|....+++.||+|++.... ......+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 468999999999999999999999888899999986432 234567788999999999999999998865432 33457
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 148 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHS----------DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRI 148 (334)
T ss_pred EEEEEehhh-hhHHHHhcc----------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEe
Confidence 899999995 689888842 23589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCc--ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 788 SDFGLARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|||.+......... .......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~ 226 (334)
T cd07855 149 GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILS 226 (334)
T ss_pred cccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHH
Confidence 999999765432211 11223468899999998765 468899999999999999999999997532211 1111111
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhh-hhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARI-NSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.......+..+.......... ...........+ ......+.++.+++.+||+.||++|||+++++..
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKY-IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhCCChhHhhhhhchhhHHHH-HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111111111110000000000 000000000000 0112346779999999999999999999998874
No 305
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.1e-34 Score=303.43 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=198.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc------hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH------HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
+|+..+.||+|+||.||+|....+++.||+|+++... ....+.+.+|++++++++|+|++++++++. ++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence 4788899999999999999998888899999986432 223567899999999999999999999954 44
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-c
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-M 784 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~ 784 (953)
+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++ .
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~----------~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~ 142 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSK----------YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQR 142 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHH----------hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 788999999999999999852 12578899999999999999999999 999999999999998776 6
Q ss_pred EEEeccccceecCCCCCc--ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
+||+|||.+......... .......++..|+|||.+.+..++.++||||+|+++|++++|..||....... .....
T Consensus 143 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~ 220 (268)
T cd06630 143 LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN--HLALI 220 (268)
T ss_pred EEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc--hHHHH
Confidence 999999999876432111 11223457889999999988889999999999999999999999986421111 11110
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... ...... ...+...++++.+++.+|++.+|++|||+.|+++
T Consensus 221 ~~~--------~~~~~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 FKI--------ASATTA------------------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHH--------hccCCC------------------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000 000000 0011134567889999999999999999999975
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.1e-34 Score=309.64 Aligned_cols=276 Identities=22% Similarity=0.301 Sum_probs=201.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++|+||+++++++.. ++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 3688999999999999999999988889999998643 23345778999999999999999999999643 4779
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++++.+..+... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 76 ~iv~e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~ 142 (288)
T cd07833 76 YLVFEYVERTLLELLEAS----------PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLC 142 (288)
T ss_pred EEEEecCCCCHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEE
Confidence 999999998777665531 23478999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh---
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM--- 864 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~--- 864 (953)
|||.+........ .......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+ .......
T Consensus 143 d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~ 219 (288)
T cd07833 143 DFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID--QLYLIQKCLG 219 (288)
T ss_pred eeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhC
Confidence 9999987654322 122334578899999999888 88999999999999999999999997532211 1111100
Q ss_pred hCCchhhhhcc--ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVD--STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..+........ ...... . .................++.++.+++.+||..+|++|||++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGV--A--FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccCcccccc--c--cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 01111000000 000000 0 000000000000001123678999999999999999999999875
No 307
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.8e-34 Score=316.42 Aligned_cols=288 Identities=21% Similarity=0.226 Sum_probs=206.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.++|.+.+.||+|+||+||+|++..+++.||+|.++.. .......+.+|+.+++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999999988889999998642 2333456778999999999999999999875443333356
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL 149 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS----------SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKI 149 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEE
Confidence 899999995 688888842 23589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh-
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA- 865 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~- 865 (953)
+|||+++...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ..........
T Consensus 150 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~ 226 (337)
T cd07858 150 CDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLG 226 (337)
T ss_pred CcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhC
Confidence 9999998664322 22233457889999998765 46889999999999999999999999653111 0011011000
Q ss_pred --CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHHHH
Q 043900 866 --LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSIKN 938 (953)
Q Consensus 866 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~ 938 (953)
.++......+.... ....................+++++.+++.+||+.+|++|||++|+++. ++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 227 SPSEEDLGFIRNEKAR----RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred CCChHHhhhcCchhhh----HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 00001000000000 0000000000000001112456778999999999999999999999986 665533
No 308
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.6e-34 Score=302.92 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=199.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|.+.+.||+|+||.||+|....+++.||+|.++.... ...+.+.+|++++++++|+||+++++++. ..+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-----HREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----cCCEEE
Confidence 58888999999999999999988888999999975443 36678999999999999999999999853 347889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|+||+++++|.+++.. ...+++..+..++.|+++|++|||+. +++|+||+|+||++++++.+||+|
T Consensus 76 lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d 142 (264)
T cd06626 76 IFMEYCSGGTLEELLEH----------GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGD 142 (264)
T ss_pred EEEecCCCCcHHHHHhh----------cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999852 22478889999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccc--ccccccccccccccccCCCC---CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 790 FGLARFLPLSPAQTS--SIDAKGSIGYIAPEYGLGSE---VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 790 fG~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||.+........... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ... ...
T Consensus 143 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~--~~~ 219 (264)
T cd06626 143 FGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIM--FHV 219 (264)
T ss_pred cccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHH--HHH
Confidence 999987643322211 11345788999999988776 8899999999999999999999997432110 000 000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. .. .... +.....+..+.+++.+||+.+|++|||+.|++.
T Consensus 220 ~~-~~-----~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 220 GA-GH-----KPPI--------------------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred hc-CC-----CCCC--------------------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 00 0000 000123456789999999999999999999874
No 309
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8.5e-34 Score=305.96 Aligned_cols=249 Identities=20% Similarity=0.256 Sum_probs=198.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
.|...+.||+|++|.||+|....+++.||+|+++.......+.+.+|+.+++.++|||++++++++. ..+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 3455679999999999999998888899999987655555667889999999999999999999854 34778999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
+||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 95 ~e~~~~~~L~~~~~~-----------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g 160 (285)
T cd06648 95 MEFLEGGALTDIVTH-----------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFG 160 (285)
T ss_pred EeccCCCCHHHHHHh-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccc
Confidence 999999999999852 2578899999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
.+....... .......|+..|+|||...+..++.++|||||||++|||++|+.||..... ...........
T Consensus 161 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~~-- 231 (285)
T cd06648 161 FCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDNL-- 231 (285)
T ss_pred cchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhcC--
Confidence 887553221 122234588999999999888899999999999999999999999864211 01111000000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.. ......+.++.+++.+||+.+|++|||+.++++
T Consensus 232 ---~~~~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 232 ---PPKL--------------------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ---CCCC--------------------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000 000123457899999999999999999999986
No 310
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.3e-33 Score=301.48 Aligned_cols=253 Identities=24% Similarity=0.309 Sum_probs=204.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch-hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
++|++.+.||+|++|.||+|++..+++.||+|++..... .....+.+|++.+.+++|+|++++++++. .+...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368889999999999999999998888999999875443 45678899999999999999999999964 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
+||||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+
T Consensus 76 lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~ 142 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV----------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIA 142 (264)
T ss_pred EEEEecCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEc
Confidence 999999999999999532 368999999999999999999999 8 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+......... .....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ............
T Consensus 143 df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~ 218 (264)
T cd06623 143 DFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDG 218 (264)
T ss_pred cCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcC
Confidence 99999876432221 12345788999999999999999999999999999999999999754321 111111111000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHH-HHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIE-CLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... .... ++..+.+++.+||+.+|++||++.|+++.
T Consensus 219 --------~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 219 --------PPPS-------------------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --------CCCC-------------------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 0001 45678999999999999999999999874
No 311
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.8e-34 Score=308.44 Aligned_cols=264 Identities=19% Similarity=0.233 Sum_probs=186.3
Q ss_pred hcCCcccCcccccceeeEEEEEEcCC---CeEEEEEEeeccchhh-----------HHHHHHHHHHHhhcCCCCeeEEEe
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQG---KTTVAVKVFNLLHHGA-----------FKSFIAECNTLKNIRHRNLVKILT 695 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~~~ 695 (953)
.++|.+.+.||+|+||.||+|.+.++ ...+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 35799999999999999999999877 5567777654222111 011223344556678999999998
Q ss_pred eecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCC
Q 043900 696 ACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPS 775 (953)
Q Consensus 696 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 775 (953)
++... .......++++|++. .++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~ 155 (294)
T PHA02882 91 CGSFK-RCRMYYRFILLEKLV-ENTKEIFKR----------IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPE 155 (294)
T ss_pred eeeEe-cCCceEEEEEEehhc-cCHHHHHHh----------hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 75432 111124567888773 355555531 11356778899999999999999999 9999999999
Q ss_pred CeEecCCCcEEEeccccceecCCCCCc-----ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 776 NVLLDEEMMAHVSDFGLARFLPLSPAQ-----TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 776 NIll~~~~~~kL~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|||++.++.++|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||..
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~ 235 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKG 235 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999876432211 111224599999999999999999999999999999999999999976
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
...... ........+ ...+..... ....++.++.+++..||+.+|++||+++++.
T Consensus 236 ~~~~~~-~~~~~~~~~---~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~ 290 (294)
T PHA02882 236 FGHNGN-LIHAAKCDF---IKRLHEGKI---------------------KIKNANKFIYDFIECVTKLSYEEKPDYDALI 290 (294)
T ss_pred cccchH-HHHHhHHHH---HHHhhhhhh---------------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 422211 111110000 000000000 0012356789999999999999999999999
Q ss_pred HHH
Q 043900 931 RQL 933 (953)
Q Consensus 931 ~~L 933 (953)
+.+
T Consensus 291 ~~~ 293 (294)
T PHA02882 291 KIF 293 (294)
T ss_pred Hhh
Confidence 876
No 312
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-33 Score=307.16 Aligned_cols=275 Identities=22% Similarity=0.253 Sum_probs=198.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch-----hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-----GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|...+.||+|+||.||+|.+..+++.||+|.++.... .....+..|++++++++|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 47788999999999999999988888999999974432 234567789999999999999999999643 47
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+ +|+|.+++.... ..+++..++.++.||++||+|||+. +++||||+|+||+++.++.+|
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~---------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~ 142 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS---------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLK 142 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEE
Confidence 889999999 899999995321 2589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.++....... ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||......+ .........
T Consensus 143 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~ 219 (298)
T cd07841 143 LADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEAL 219 (298)
T ss_pred EccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHc
Confidence 999999987643321 1222346788999998765 467899999999999999999987776422111 111111110
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.........+......... ................+.++.+++.+||++||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 220 GTPTEENWPGVTSLPDYVE----FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred CCCchhhhhhccccccccc----ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000000000000000000 0000000000011234567899999999999999999999987
No 313
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.5e-33 Score=303.04 Aligned_cols=248 Identities=24% Similarity=0.328 Sum_probs=198.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
-|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+..+++++||||+++++++. .+...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEEE
Confidence 4778889999999999999998888899999986432 334567889999999999999999999854 3477899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+||
T Consensus 80 v~e~~~~~~l~~~i~~-----------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~df 145 (277)
T cd06641 80 IMEYLGGGSALDLLEP-----------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADF 145 (277)
T ss_pred EEEeCCCCcHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeec
Confidence 9999999999999841 2578999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|++....... .......++..|+|||.+.+..++.++|||||||++|+|++|..||...... ...... ...
T Consensus 146 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~-~~~- 216 (277)
T cd06641 146 GVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFLI-PKN- 216 (277)
T ss_pred ccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHHH-hcC-
Confidence 9997654321 1122235788999999998888999999999999999999999998642211 000000 000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... .....+.++.+++.+||+.+|++||++.++++.
T Consensus 217 -------~~~~------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 -------NPPT------------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -------CCCC------------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 001234568899999999999999999999984
No 314
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-33 Score=310.75 Aligned_cols=209 Identities=23% Similarity=0.314 Sum_probs=170.4
Q ss_pred CCcccCcccccceeeEEEEEEcC--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQ--GKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|++.+.||+|+||.||+|.+.. .++.||+|.+.... ......+.+|+.++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47888999999999999999988 77899999997532 34456778899999999999999999997532 236
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC----C
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE----E 782 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~ 782 (953)
..++||||+++ ++.+++...... ....+++..++.++.|++.||+|||+. +++||||||+||+++. +
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQA-----KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccC-----CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCcc
Confidence 79999999965 676666432221 123688999999999999999999999 9999999999999999 9
Q ss_pred CcEEEeccccceecCCCCC-cccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcc
Q 043900 783 MMAHVSDFGLARFLPLSPA-QTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMF 852 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~ 852 (953)
+.+||+|||+++....... ........++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 9999999999987643322 1122334578899999987664 57899999999999999999999997543
No 315
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=341.38 Aligned_cols=255 Identities=24% Similarity=0.292 Sum_probs=203.1
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
..+-+|.....||.|.||.||-|...++++..|+|.++. ......+...+|+.++..++|||+|+++|+ .-+.
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV-----EvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV-----EVHR 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce-----eecH
Confidence 445678888999999999999999999999999998863 334456678899999999999999999998 3345
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
+..+|.||||++|+|.+.+.. ++..++.....+..|++.|++|||++ |||||||||+||+++.+|.+
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~----------gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~i 1373 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEH----------GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLI 1373 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHh----------cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcE
Confidence 789999999999999999952 33467777788999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCC--CcccccccccccccccccccCCCC---CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHH
Q 043900 786 HVSDFGLARFLPLSP--AQTSSIDAKGSIGYIAPEYGLGSE---VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHN 860 (953)
Q Consensus 786 kL~DfG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~ 860 (953)
|++|||.|..+.... .........||+.|||||++.+.. ...++||||+|||+.||+||+.||......-..+-+
T Consensus 1374 K~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1374 KYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred EeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 999999998875432 112234567999999999988754 457899999999999999999999864333211111
Q ss_pred HHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 861 FARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 861 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.... ++.+...+.+=.+++.+|++.||++|.++.|+++
T Consensus 1454 V~~gh~-------------------------------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 VAAGHK-------------------------------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhccCC-------------------------------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111111 1111234556778999999999999999987765
No 316
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.1e-34 Score=307.69 Aligned_cols=245 Identities=22% Similarity=0.255 Sum_probs=197.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++||||+++++++. .+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence 4688999999999999999999988889999998642 2334567889999999999999999999853 4478
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~----------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl 142 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS----------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKI 142 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 89999999999999998532 3688999999999999999999998 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||++...... .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... .........
T Consensus 143 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~ 212 (290)
T cd05580 143 TDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYEKILE 212 (290)
T ss_pred eeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc
Confidence 999999876432 2234588999999999888899999999999999999999999864221 000000000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.. ..+ +...+..+.+++.+||+.||.+|| +++|+++
T Consensus 213 ~~------~~~----------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 213 GK------VRF----------------------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CC------ccC----------------------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 00 000 001235688999999999999999 6666653
No 317
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-33 Score=314.97 Aligned_cols=285 Identities=19% Similarity=0.190 Sum_probs=202.8
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQG 704 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 704 (953)
...++|++.+.||+|+||.||+|.+..+++.||+|++.. ........+.+|+.++++++||||+++++++.... ..+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 456789999999999999999999998888999999853 23334466778999999999999999999865321 223
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||++ ++|.+++. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~------------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~ 156 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQ------------MDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 156 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCC
Confidence 356799999995 58888773 1378889999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+||+|||.++...... ......++..|+|||++.+..++.++|||||||++|+|++|+.||...... ..+......
T Consensus 157 ~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~ 232 (353)
T cd07850 157 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQ 232 (353)
T ss_pred EEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHh
Confidence 9999999998754321 122345788999999999999999999999999999999999999643211 011111110
Q ss_pred hC--CchhhhhccccccCCchhhh------hcc---cchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 AL--PDHVVDIVDSTLLSDDEDLA------VHG---NQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~--~~~~~~~~~~~l~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.. +....+..+........... ... ....+..........+.++.+++.+|++.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00111111100000000000 000 0000000000011335678899999999999999999999864
No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=278.69 Aligned_cols=250 Identities=23% Similarity=0.292 Sum_probs=192.6
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
...+..||.|..|.||+++.+.++...|||.+... ..++.+++...+.++.+- .+|+||+.+|||. .+..+++
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV~I 168 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDVFI 168 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchHHH
Confidence 34556799999999999999999999999999743 445567777888877666 4999999999964 3467889
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
.||.|. ..+..+++.. ..++++..+-++...+++||.||-+++ +|+|||+||+|||+|+.|++|+|||
T Consensus 169 cMelMs-~C~ekLlkri---------k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 169 CMELMS-TCAEKLLKRI---------KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred HHHHHH-HHHHHHHHHh---------cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecc
Confidence 999983 3455555422 235888888899999999999998763 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS---EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
|.+.++..+.+... ..|-+.|||||.+... .|+-++||||||++++||.||+.||.+...+...+..... ..|
T Consensus 237 GIsGrlvdSkAhtr---sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP 312 (391)
T KOG0983|consen 237 GISGRLVDSKAHTR---SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP 312 (391)
T ss_pred cccceeeccccccc---ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC
Confidence 99987765544433 3588999999987643 6889999999999999999999999864332211111111 111
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. .+ ......++.+.+++..|++.|+.+||...++++
T Consensus 313 P--------~L--------------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 313 P--------LL--------------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred C--------CC--------------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 11 111124667999999999999999999998876
No 319
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.3e-33 Score=306.77 Aligned_cols=284 Identities=20% Similarity=0.260 Sum_probs=199.1
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 707 (953)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++ ||||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999999888899999986432 223457888999999994 699999999875443223344
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-CCcEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE-EMMAH 786 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~k 786 (953)
.++||||+++ +|.+++...... ....+++..++.++.||+.||+|||+. +++||||||+||+++. ++.+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-----~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-----PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEE
Confidence 7999999975 888887533211 123589999999999999999999999 9999999999999998 88999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||.++.+.... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||........ ........
T Consensus 152 l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~ 228 (295)
T cd07837 152 IADLGLGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLL 228 (295)
T ss_pred EeecccceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHh
Confidence 99999998653221 11223346888999998765 4578999999999999999999999975322111 11111100
Q ss_pred -CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 -LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+.. ... +........ ...... .+..........+.++.+++.+||+.||++||+++|++.
T Consensus 229 ~~~~~--~~~-~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 229 GTPTE--QVW-PGVSKLRDW-HEFPQW-KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCCh--hhC-cchhhccch-hhcCcc-cchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 000 000000000 000000 000000111235677899999999999999999999875
No 320
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.6e-34 Score=313.92 Aligned_cols=288 Identities=22% Similarity=0.276 Sum_probs=202.4
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 705 (953)
..++|++.+.||+|+||.||+|.+..+++.||+|++.. ........+.+|+.+++++ +||||++++++|.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 45678999999999999999999988888999998853 2233345677899999999 99999999998643 233
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~ 146 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRA-----------NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRV 146 (337)
T ss_pred ceEEEEecccc-cCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcE
Confidence 56899999996 589888842 1578889999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCc---ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 786 HVSDFGLARFLPLSPAQ---TSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
||+|||.+......... .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ....
T Consensus 147 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~ 225 (337)
T cd07852 147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKI 225 (337)
T ss_pred EEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Confidence 99999999866433221 12233458899999998765 4578999999999999999999999965322111 1111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSI 936 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i 936 (953)
.. .......+................................+.++.+++.+||+.||++|||+.++++. ++..
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 226 IE-VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HH-HhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 00 00000000000000000000000000000000001111246779999999999999999999999975 4444
No 321
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-33 Score=303.58 Aligned_cols=249 Identities=21% Similarity=0.303 Sum_probs=196.8
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcC---CCCeeEEEeeecccccCCCCc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIR---HRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 707 (953)
.|+..+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|+.++++++ |||+++++++|. .+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 477789999999999999999888889999998643 3344567888999999996 999999999864 3467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+++++|.++++. ..+++..++.++.|++.|+.|||+. +++||||+|+||+++.++.++|
T Consensus 77 ~~lv~e~~~~~~L~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l 142 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA-----------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKL 142 (277)
T ss_pred EEEEEecCCCCcHHHHHHc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEE
Confidence 8999999999999998842 2588999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||.+....... .......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... ......
T Consensus 143 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~- 214 (277)
T cd06917 143 CDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLI- 214 (277)
T ss_pred ccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhcc-
Confidence 9999998765332 222334588999999987654 5689999999999999999999999642111 000000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
... ..+.+.. ...+.++.+++.+||+.||++||++.|+++.
T Consensus 215 ~~~----~~~~~~~---------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 215 PKS----KPPRLED---------------------NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ccC----CCCCCCc---------------------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 000 0000000 0134568899999999999999999999863
No 322
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-33 Score=307.16 Aligned_cols=279 Identities=22% Similarity=0.278 Sum_probs=198.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++++++... .....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 57889999999999999999999888899999997433 22234567899999999999999999986432 23689
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~ 148 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMK---------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKIC 148 (293)
T ss_pred EEEehhcC-cCHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEe
Confidence 99999997 58988885321 2589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC-
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL- 866 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~- 866 (953)
|||.+....... .......+++.|+|||.+.+. .++.++||||+|+++|||++|..||......+ ..........
T Consensus 149 d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~ 225 (293)
T cd07843 149 DFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGT 225 (293)
T ss_pred ecCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCC
Confidence 999998765332 122234578899999988765 46899999999999999999999997532111 1111111000
Q ss_pred --CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 --PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+..+....+-..... ... .............. ....+.+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 226 PTEKIWPGFSELPGAKK-KTF-TKYPYNQLRKKFPA-LSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CchHHHHHhhccchhcc-ccc-ccccchhhhccccc-cCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000000 000 00000000000000 013566889999999999999999999985
No 323
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-33 Score=307.87 Aligned_cols=285 Identities=21% Similarity=0.280 Sum_probs=197.8
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc---CC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---QG 704 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 704 (953)
.++|++.+.||+|+||.||+|....+++.||+|.+.... ......+.+|++++++++||||++++++|..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999999888999999986432 2223456789999999999999999999765421 12
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+. +++.+++... ...+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~ 157 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNK---------NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGI 157 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCc
Confidence 345699999996 4787777421 22589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCc--ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
+||+|||.+......... .......++..|+|||++.+. .++.++||||||+++|||++|+.||...... .....
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~ 235 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTL 235 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 999999999866432211 112234578899999987665 4788999999999999999999998653211 11111
Q ss_pred HHh---hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 862 ARM---ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 862 ~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... ..+.......+... ...........................+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 236 ISQLCGSITPEVWPGVDKLE--LFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHhCCCChhhcccccchh--hhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 111 11111100000000 000000000000000000000012345779999999999999999999975
No 324
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=291.66 Aligned_cols=280 Identities=21% Similarity=0.242 Sum_probs=202.7
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC-C-C----CeeEEEeeeccccc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR-H-R----NLVKILTACSGVDY 702 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~~~~~~~~~~~ 702 (953)
.+.+|.+...+|+|.||.|-.+.+...+..||||+++... ...+..+-|+++++++. + | -+|.+.+| +
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----F 160 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----F 160 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----h
Confidence 3788999999999999999999999999999999997543 24456678999999993 2 2 25666666 4
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE- 781 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 781 (953)
+..++.|||+|.+ |-|+.++++.+.. .+++..++..|++|++++++|||+. +++|-||||+|||+.+
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N~y--------~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKENNY--------IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSS 228 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccCCc--------cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEecc
Confidence 5568999999999 6799999975543 3789999999999999999999999 9999999999999821
Q ss_pred -------------------CCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHH
Q 043900 782 -------------------EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELV 842 (953)
Q Consensus 782 -------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ell 842 (953)
+..+|++|||.|++..+.. ...+.|..|+|||++.+-.|+.++||||+||||+|++
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 3368999999998753322 4456899999999999999999999999999999999
Q ss_pred hCCCCCCCcccC-CccHHHHHHhhCCchhhh------hccccccCCch------hhhhcccchhhhhhhhhHHHHHHHHH
Q 043900 843 TRKKPVDSMFEG-DMNLHNFARMALPDHVVD------IVDSTLLSDDE------DLAVHGNQRQRQARINSKIECLVAMV 909 (953)
Q Consensus 843 tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~ 909 (953)
||...|..-... +..+.+.+-..+|..+.. .+...-..+++ ...+....++.............++.
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 999998753311 111111111122221111 11111000000 00111111111111222334556799
Q ss_pred HHhhccccCCCCCCCCHHHHHH
Q 043900 910 RIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 910 ~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+++++|+..||.+|+|+.|++.
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHccCccccccHHHHhc
Confidence 9999999999999999999875
No 325
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.3e-33 Score=301.49 Aligned_cols=243 Identities=22% Similarity=0.265 Sum_probs=183.7
Q ss_pred cccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHh---hcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 638 EIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLK---NIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
.||+|+||.||+|.+..+++.||+|.+.... ......+.+|..+++ ..+||+++.+++++. ..+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999999888899999986422 111223344443333 347999999998853 34678999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~i~~----------~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 76 LDLMNGGDLHYHLSQ----------HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred EecCCCCCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCC
Confidence 999999999998852 23589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
++....... .....|+..|+|||.+. +..++.++||||+||++|||++|..||........ .........
T Consensus 143 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~--- 213 (279)
T cd05633 143 LACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT--- 213 (279)
T ss_pred cceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhc---
Confidence 997553221 12345899999999886 45689999999999999999999999975322111 111000000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVRQ 932 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 932 (953)
... ..+...+.++.+++.+||+.||++|| |++|+++.
T Consensus 214 ---~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 214 ---VNV----------------------ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ---CCc----------------------CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 000 00112356788999999999999999 58888774
No 326
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.7e-33 Score=305.67 Aligned_cols=248 Identities=25% Similarity=0.306 Sum_probs=193.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.+.|+..+.||+|+||.||+|+...+++.||+|++... .....+.+.+|+++++.++|||++++.++|.. ++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~ 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----EH 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----CC
Confidence 35688899999999999999999888889999998632 22344678899999999999999999999643 36
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||++ |++.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+|
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~~---------~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEVH---------KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHHc---------ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEE
Confidence 7899999996 5676666321 22589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~ 863 (953)
|+|||++...... ....++..|+|||++. ...++.++||||||+++|||+||+.||....... ...
T Consensus 156 L~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-----~~~ 224 (307)
T cd06607 156 LADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALY 224 (307)
T ss_pred EeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-----HHH
Confidence 9999999765322 1235788999999874 4568899999999999999999999986421110 000
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
....... ... ....++.++.+++.+||+.||++||++.+++..
T Consensus 225 ~~~~~~~---------~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 225 HIAQNDS---------PTL-----------------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHhcCCC---------CCC-----------------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000 000 001245578999999999999999999999873
No 327
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.8e-33 Score=302.43 Aligned_cols=275 Identities=21% Similarity=0.286 Sum_probs=199.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
+|++.+.||+|++|.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++.. .+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEEE
Confidence 4888999999999999999999888899999987443 2334667789999999999999999999643 467899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||
T Consensus 76 v~e~~~~-~l~~~~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~ 144 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV-------RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADF 144 (284)
T ss_pred EEecCCc-cHHHHHHhcCC-------CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeec
Confidence 9999975 88888753221 23589999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC---
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL--- 866 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~--- 866 (953)
|.+....... .......++..|+|||++.+. .++.++|||||||++||+++|+.||......+ ..........
T Consensus 145 g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (284)
T cd07836 145 GLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPT 221 (284)
T ss_pred chhhhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCC
Confidence 9997553221 112234578899999987664 57889999999999999999999997532211 1111111110
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
......+.+. ...... ................+.++.+++.+|++.||.+||+++|+++
T Consensus 222 ~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 222 ESTWPGISQL--PEYKPT----FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhhHHHHhcC--chhccc----ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001111100 000000 0000000001111234677899999999999999999999975
No 328
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.5e-33 Score=299.77 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=198.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|.+.+.||+|+||.||+|....++..||+|.+.... ....+.+.+|++++++++|+||+++++.+. .+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-----ENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-----cCCeEE
Confidence 4788899999999999999999888899999986431 234467789999999999999999999853 447899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-cEEEe
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-MAHVS 788 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~ 788 (953)
+|+||+++++|.+++.... ...+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+||+
T Consensus 76 lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~ 144 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQR--------GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLG 144 (257)
T ss_pred EEEecCCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEec
Confidence 9999999999999986322 12578999999999999999999999 999999999999999875 57999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+....... .......|++.|+|||+..+..++.++||||||+++||+++|..||.... ..+........
T Consensus 145 d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~ 217 (257)
T cd08225 145 DFGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQG 217 (257)
T ss_pred ccccchhccCCc--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcc
Confidence 999998664322 12223458899999999988899999999999999999999999986421 11111111111
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... . ....+.++.+++.+||+.+|++|||+.|+++
T Consensus 218 ~~~~--------~-------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 218 YFAP--------I-------------------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred cCCC--------C-------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0000 0 0012346889999999999999999999976
No 329
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=296.07 Aligned_cols=248 Identities=23% Similarity=0.306 Sum_probs=200.8
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
+.|+.-++||+|+||.||-++.+.+++.+|.|.+... .........+|-.++.+++.+.||.+--. ++..+.
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd~ 259 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKDA 259 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCCc
Confidence 4577889999999999999999999999999988422 23344567789999999999999988655 566789
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.|+|+..|.||||.-++.... .+.+++..+.-+|.+|+-||++||.. +||.||+||+|||+|+.|+++|
T Consensus 260 LClVLtlMNGGDLkfHiyn~g--------~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHG--------NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred eEEEEEeecCCceeEEeeccC--------CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEe
Confidence 999999999999999996443 34799999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|.|+|..++.+... ...+||.+|||||++.+..|+...|-||+||++|||+.|+.||....+.
T Consensus 329 SDLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK------------- 392 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK------------- 392 (591)
T ss_pred eccceEEecCCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-------------
Confidence 999999988654332 3447999999999999999999999999999999999999999642211
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM 926 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 926 (953)
...+.+|++...+... .+...+++..++.+..++.||++|...
T Consensus 393 -vk~eEvdrr~~~~~~e---------------y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 393 -VKREEVDRRTLEDPEE---------------YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred -hhHHHHHHHHhcchhh---------------cccccCHHHHHHHHHHHccCHHHhccC
Confidence 1112223322222211 122456778889999999999998643
No 330
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.6e-33 Score=304.12 Aligned_cols=274 Identities=27% Similarity=0.343 Sum_probs=196.5
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|++.+.||+|++|.||+|.+..+++.||+|++.... ......+.+|++++++++|||++++++++. +++..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 677889999999999999998888899999986432 233457888999999999999999999964 3478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||++ ++|.+++..... ..+++..++.++.|+++||+|||+. +++||||+|+||+++.++.++|+||
T Consensus 76 v~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 143 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL--------TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADF 143 (283)
T ss_pred EEeccC-cCHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeec
Confidence 999995 689998853221 2589999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh-CCc
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA-LPD 868 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~-~~~ 868 (953)
|.+........ ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+ ......... .+.
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 220 (283)
T cd07835 144 GLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPD 220 (283)
T ss_pred ccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 99976532211 11223468899999987664 57899999999999999999999996532211 111111111 011
Q ss_pred h-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 H-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ....... + ...... ..... ...........+.++.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~~~~-~-~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 221 EDVWPGVTS-L-PDYKPT-FPKWA--RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hHHhhhhhh-c-hhhhhh-ccccc--ccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0000000 0 000000 00000 00000011123457889999999999999999999975
No 331
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.9e-33 Score=304.00 Aligned_cols=245 Identities=22% Similarity=0.277 Sum_probs=195.9
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
..+||+|+||.||+|....+++.||+|++..........+.+|+.+++.++|+|++++++++. .++..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEecC
Confidence 367999999999999999888899999987555555677899999999999999999999854 347899999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++. ...+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+..
T Consensus 100 ~~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~ 165 (292)
T cd06657 100 EGGALTDIVT-----------HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 165 (292)
T ss_pred CCCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEccccccee
Confidence 9999999874 12478899999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
..... .......|+..|+|||...+..++.++||||+|+++|||++|..||...... ..........+....
T Consensus 166 ~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~---- 237 (292)
T cd06657 166 VSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPKLK---- 237 (292)
T ss_pred ccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCcccC----
Confidence 54321 1122345889999999998888999999999999999999999998642111 111111111111000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.....+..+.+++.+||+.||.+||++.++++
T Consensus 238 ------------------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 ------------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ------------------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 00123456789999999999999999999987
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.3e-34 Score=306.72 Aligned_cols=258 Identities=24% Similarity=0.282 Sum_probs=192.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|...+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++. .+...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEE
Confidence 4566788999999999999999888899999986432 344567889999999996 999999999854 346788
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
++|||+.. ++.++...... .....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~d 151 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYE-----VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCD 151 (288)
T ss_pred EEEecccC-CHHHHHHHHHH-----hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEee
Confidence 99999854 55443321100 1123689999999999999999999963 2899999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCC---CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS---EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||+++....... .....|+..|+|||++.+. .++.++|||||||++|||++|+.||..... .........
T Consensus 152 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~ 224 (288)
T cd06616 152 FGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVV 224 (288)
T ss_pred cchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhc
Confidence 999976532211 1223588899999998776 689999999999999999999999864210 001111100
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.... +.+.. .....++.++.+++.+||+.||++|||++||++.
T Consensus 225 ~~~~-----~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 225 KGDP-----PILSN------------------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCC-----CcCCC------------------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00000 0001345678999999999999999999999874
No 333
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.8e-33 Score=296.89 Aligned_cols=251 Identities=18% Similarity=0.237 Sum_probs=193.0
Q ss_pred HHHHHHhhcCCcccCcc--cccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 623 YQNLYNATDGFASANEI--GVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 623 ~~~~~~~~~~~~~~~~i--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
..+.....++|++.+.+ |+|+||.||++..+.+++.+|+|+++....... |+.....+ +|||++++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe-
Confidence 34455556678887777 999999999999998888999999864322111 22222222 7999999999864
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
.++..++||||+++++|.+++... ..+++.++..++.|+++|++|||+. +++||||||+||++
T Consensus 80 ----~~~~~~iv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~ 142 (267)
T PHA03390 80 ----TLKGHVLIMDYIKDGDLFDLLKKE----------GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLY 142 (267)
T ss_pred ----cCCeeEEEEEcCCCCcHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEE
Confidence 346899999999999999999521 2689999999999999999999999 99999999999999
Q ss_pred cCCC-cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccH
Q 043900 780 DEEM-MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNL 858 (953)
Q Consensus 780 ~~~~-~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~ 858 (953)
+.++ .++|+|||.++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||......+...
T Consensus 143 ~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 216 (267)
T PHA03390 143 DRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216 (267)
T ss_pred eCCCCeEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence 9988 9999999999865322 12348899999999999999999999999999999999999997543333222
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-HHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-MTNVVR 931 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 931 (953)
..+.... ... .......++.+.+++.+||+.+|.+||+ ++|+++
T Consensus 217 ~~~~~~~-~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 217 ESLLKRQ-QKK----------------------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHhh-ccc----------------------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 2222111 000 0000134556899999999999999996 588764
No 334
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=255.79 Aligned_cols=276 Identities=21% Similarity=0.288 Sum_probs=198.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.|...++||+|.||+||+|+..++.+.||+|.++. .+++......+|+-+++.++|.|||+++++ ...+....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 56778899999999999999999999999999974 334456788999999999999999999998 45568889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|+|||. .+|..|.... .+.++...+..++.|+++|+.|+|++ .+.|||+||.|.+++.+|+.|++|
T Consensus 78 lvfe~cd-qdlkkyfdsl---------ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelklad 144 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSL---------NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLAD 144 (292)
T ss_pred EeHHHhh-HHHHHHHHhc---------CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecc
Confidence 9999994 5888888543 34588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCC-CCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE-VSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
||+|+-++.. ..-....+.|.+|++|.++.|.+ |+...|+||.||++.|+.. |++.|.+..-.+ .+.+..+..-.
T Consensus 145 fglarafgip--vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-qlkrif~~lg~ 221 (292)
T KOG0662|consen 145 FGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGT 221 (292)
T ss_pred cchhhhcCCc--eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-HHHHHHHHhCC
Confidence 9999876432 22233456899999999998875 7889999999999999998 666666533322 23333222211
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.....+-.-.-.+++............... .+.....=.++++..+.-+|..|.++++.++
T Consensus 222 p~ed~wps~t~lpdyk~yp~ypattswsqi---vp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 222 PTEDQWPSMTKLPDYKPYPIYPATTSWSQI---VPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccCCccccCCCCcccCCccccchHHHH---hhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 110011000011111110000000000000 0111122346777777789999999998765
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4e-33 Score=301.82 Aligned_cols=276 Identities=22% Similarity=0.271 Sum_probs=199.0
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|++.+.||+|+||.||+|+...+++.||+|+++... ......+.+|++++++++|||++++++++... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 667889999999999999999888899999997542 33456788999999999999999999996432 1368999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++ +|.+++... ...+++..++.++.|+++|++|||+. +++|+||+|+||++++++.+||+||
T Consensus 78 v~e~~~~-~l~~~~~~~---------~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~ 144 (287)
T cd07840 78 VFEYMDH-DLTGLLDSP---------EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADF 144 (287)
T ss_pred Eeccccc-cHHHHHhcc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccc
Confidence 9999974 888888532 13689999999999999999999998 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC--
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP-- 867 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~-- 867 (953)
|.+........ .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............
T Consensus 145 g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~ 222 (287)
T cd07840 145 GLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPT 222 (287)
T ss_pred cceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCc
Confidence 99987654321 11223456888999997765 45789999999999999999999999753221 111111111000
Q ss_pred -chhhhhccccccCCchhhhhcccchhhhhhhhhHHH-HHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 -DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIE-CLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.......+. ..... ................. ++.++.+++.+||+.+|.+||+++++++
T Consensus 223 ~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 223 DENWPGVSKL---PWFEN--LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccc---hhhhh--ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000 00000 00000000000001111 3678999999999999999999999976
No 336
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.9e-33 Score=305.91 Aligned_cols=280 Identities=25% Similarity=0.267 Sum_probs=197.9
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++|+|++++++++.+. ..+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 467999999999999999999999888899999987432 22234567899999999999999999986432 2356
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||++ ++|.+++.... ..+++.+++.++.|+++|++|||+. +++||||||+||++++++.+||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~---------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL 149 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP---------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKI 149 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 799999996 47888875321 3589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||.+....... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..........
T Consensus 150 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~ 225 (309)
T cd07845 150 ADFGLARTYGLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLL 225 (309)
T ss_pred CccceeeecCCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhc
Confidence 9999998764322 11222345788999999866 45789999999999999999999999753221 1111111111
Q ss_pred Cchhhhhcccc-ccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDST-LLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........... ..+......... . ............++++.+++.+|+++||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 226 GTPNESIWPGFSDLPLVGKFTLPK-Q-PYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCChhhchhhhcccccccccccC-C-CCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11000000000 000000000000 0 000000000123567889999999999999999999986
No 337
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-34 Score=279.89 Aligned_cols=273 Identities=20% Similarity=0.273 Sum_probs=207.0
Q ss_pred cCHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc
Q 043900 621 ISYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSG 699 (953)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 699 (953)
-.+++....++ +.||+|+|+.|--+....++..||||++.........+..+|++++.+. .|+||++++++
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief--- 144 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF--- 144 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH---
Confidence 35788877775 6899999999999999999899999999877777788999999999999 59999999999
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
+++++..|+|||-|.||+|..++++ ...+++.++.++.++|+.||.|||.+ ||+|||+||+|||.
T Consensus 145 --FEdd~~FYLVfEKm~GGplLshI~~----------~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC 209 (463)
T KOG0607|consen 145 --FEDDTRFYLVFEKMRGGPLLSHIQK----------RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILC 209 (463)
T ss_pred --hcccceEEEEEecccCchHHHHHHH----------hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceee
Confidence 5667899999999999999999963 34689999999999999999999999 99999999999999
Q ss_pred cCCC---cEEEeccccceecCCCC-----CcccccccccccccccccccC---C--CCCCcccchHHHHHHHHHHHhCCC
Q 043900 780 DEEM---MAHVSDFGLARFLPLSP-----AQTSSIDAKGSIGYIAPEYGL---G--SEVSINGDVYSYGILLLELVTRKK 846 (953)
Q Consensus 780 ~~~~---~~kL~DfG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~sDv~slG~vl~elltg~~ 846 (953)
.... -|||+||.++.-+.... ........+|+..|||||+.. + ..|+.++|.||+|||+|-|++|.+
T Consensus 210 ~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYp 289 (463)
T KOG0607|consen 210 ESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYP 289 (463)
T ss_pred cCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCC
Confidence 7554 58999998886442211 122334567999999999742 2 358899999999999999999999
Q ss_pred CCCCcccCCccHHHHHHhhCCch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC
Q 043900 847 PVDSMFEGDMNLHNFARMALPDH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN 925 (953)
Q Consensus 847 pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 925 (953)
||.+....+-.+. +...-.. -..++.....+.++ .-...+..++.+..+++...+..||.+|-+
T Consensus 290 PFvG~Cg~dCGWd---rGe~Cr~CQ~~LFesIQEGkYe------------FPdkdWahIS~eakdlisnLlvrda~~rls 354 (463)
T KOG0607|consen 290 PFVGHCGADCGWD---RGEVCRVCQNKLFESIQEGKYE------------FPDKDWAHISSEAKDLISNLLVRDAKQRLS 354 (463)
T ss_pred CccCccCCcCCcc---CCCccHHHHHHHHHHHhccCCc------------CChhhhHHhhHHHHHHHHHHHhccHHhhhh
Confidence 9987544322111 0000000 00000000001000 001123355667788888888999999999
Q ss_pred HHHHHH
Q 043900 926 MTNVVR 931 (953)
Q Consensus 926 ~~evl~ 931 (953)
+.+++.
T Consensus 355 a~~vln 360 (463)
T KOG0607|consen 355 AAQVLN 360 (463)
T ss_pred hhhccC
Confidence 998876
No 338
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.5e-33 Score=309.69 Aligned_cols=291 Identities=20% Similarity=0.229 Sum_probs=208.5
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|+++++.++||||+++.+++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999998878899999987533 34457889999999999999999999987544222234789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++ ++|.+++.. ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|
T Consensus 81 lv~e~~~-~~l~~~l~~----------~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~d 146 (330)
T cd07834 81 IVTELME-TDLHKVIKS----------PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICD 146 (330)
T ss_pred EEecchh-hhHHHHHhC----------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 9999997 588888852 22689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCc-ccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 790 FGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 790 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
||.+......... .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+. ... ......
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~-i~~~~~ 224 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNL-IVEVLG 224 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHH-HHHhcC
Confidence 9999876543210 122334578899999999888 889999999999999999999999975432110 111 111111
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSIKN 938 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~ 938 (953)
....+................................+..+.+++.+||+++|++|||++++++. ++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000000000000000000000000011112246778999999999999999999999984 666554
No 339
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.8e-33 Score=308.40 Aligned_cols=287 Identities=19% Similarity=0.238 Sum_probs=197.5
Q ss_pred Cccccc--ceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVG--SFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G--~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
..||+| +||+||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||++++++|. .++..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 456766 9999999999888889999998643 2344577889999999999999999999964 347789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||++++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.
T Consensus 79 e~~~~~~l~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~ 147 (328)
T cd08226 79 PFMAYGSANSLLKTYFP--------EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSH 147 (328)
T ss_pred ecccCCCHHHHHHhhcc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHH
Confidence 99999999999864322 2588999999999999999999998 999999999999999999999999986
Q ss_pred ceecCCCCCcc-----cccccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 793 ARFLPLSPAQT-----SSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 793 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
+.......... ......++..|+|||++.+. .++.++|||||||++|||++|+.||.................
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 227 (328)
T cd08226 148 LYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPP 227 (328)
T ss_pred HhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCC
Confidence 54332111110 01112356679999998764 478999999999999999999999975432211111110000
Q ss_pred CCc--------hhhhhcccc------ccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPD--------HVVDIVDST------LLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~--------~~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... ......+.. ...................+......+.+.+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 228 YSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred CCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000 000000000 000000000000000001112223356778999999999999999999999975
Q ss_pred --HHHHHHHH
Q 043900 932 --QLQSIKNI 939 (953)
Q Consensus 932 --~L~~i~~~ 939 (953)
.++.+++.
T Consensus 308 ~~~~~~~~~~ 317 (328)
T cd08226 308 HAFFKQVKEQ 317 (328)
T ss_pred CHHHHHHHHh
Confidence 45555553
No 340
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.5e-33 Score=301.36 Aligned_cols=275 Identities=18% Similarity=0.203 Sum_probs=193.8
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|++.+.||+|+||.||+|+...+++.||+|+++... ........+|+..+.++. |+|++++++++.+. ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 677889999999999999999888899999986432 222334557888899885 99999999996432 2367899
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||++ |++.+++... ...+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+||
T Consensus 78 v~e~~~-~~l~~~l~~~---------~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~df 143 (282)
T cd07831 78 VFELMD-MNLYELIKGR---------KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADF 143 (282)
T ss_pred EEecCC-ccHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEec
Confidence 999996 5787777421 13589999999999999999999999 9999999999999999 99999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.++....... .....++..|+|||++.+ ..++.++||||+||++|||++|..||...... .............
T Consensus 144 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~ 218 (282)
T cd07831 144 GSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTP 218 (282)
T ss_pred ccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCC
Confidence 99986643222 122357889999997644 56789999999999999999999999753221 1111111111111
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..++............ .................+.++.+++.+||+.+|++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVLKKFRKSRHMNY--NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHHHhhcccccccc--cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1100000000000000 00000000000111245678999999999999999999999976
No 341
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.2e-33 Score=302.12 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=201.9
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
..+.|+..+.||+|++|.||+|.+..++..||+|+++.... ..+.+.+|++.++.++|+|++++++++.. ....
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----GDEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCEE
Confidence 45668888999999999999999997778999999975544 45778899999999999999999998643 3788
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~ 158 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF---------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLA 158 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEEC
Confidence 99999999999999996322 2689999999999999999999998 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+........ ......++..|+|||++.+..++.++|||||||++|+|++|+.||....... ....... .
T Consensus 159 d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~----~ 231 (286)
T cd06614 159 DFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITT----K 231 (286)
T ss_pred ccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh----c
Confidence 9999875532211 1123347889999999988889999999999999999999999986421110 0000000 0
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... ......++.++.+++.+||+.+|.+|||+.++++
T Consensus 232 ~~~~-------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 232 GIPP-------------------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCCC-------------------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0000 0001124557889999999999999999999986
No 342
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.8e-33 Score=295.68 Aligned_cols=250 Identities=26% Similarity=0.332 Sum_probs=201.5
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
+|+..+.||+|++|.||+|.+..+++.|++|+++.......+.+.+|++.+++++|++++++++++. .+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4778899999999999999998888899999997655456678999999999999999999999854 33778999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||
T Consensus 76 ~e~~~~~~L~~~~~~~~---------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN---------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred EecCCCCcHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecc
Confidence 99999999999985321 3689999999999999999999998 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVV 871 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 871 (953)
.+........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....... ....
T Consensus 144 ~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~---~~~~ 215 (253)
T cd05122 144 LSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--ALFKIAT---NGPP 215 (253)
T ss_pred cccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHh---cCCC
Confidence 9987643321 234458899999999988889999999999999999999999987421110 0000000 0000
Q ss_pred hhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 872 DIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 872 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.. ......+.++.+++.+||+.||++|||+.|+++
T Consensus 216 ~~-------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 216 GL-------------------------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred Cc-------------------------CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 000112456889999999999999999999975
No 343
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.2e-33 Score=300.52 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=198.6
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 4788999999999999999999888899999996432 23467889999999999999999999884 445789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~ 142 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK----------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHIT 142 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc----------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEe
Confidence 9999999999999998522 3688999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc
Q 043900 789 DFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD 868 (953)
Q Consensus 789 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 868 (953)
|||.+....... ......|+..|+|||++.+..++.++||||+|+++|+|++|..||...... ........ ...
T Consensus 143 d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-~~~ 216 (258)
T cd05578 143 DFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAK-QET 216 (258)
T ss_pred ecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHH-hcc
Confidence 999998654322 223345888999999998888999999999999999999999999753221 01111100 000
Q ss_pred hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH--HHHH
Q 043900 869 HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM--TNVV 930 (953)
Q Consensus 869 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~evl 930 (953)
. ....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 217 ~---------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 A---------------------------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred c---------------------------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0 000111234678899999999999999999 5544
No 344
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=329.44 Aligned_cols=268 Identities=25% Similarity=0.386 Sum_probs=210.6
Q ss_pred cCCcccCcccccceeeEEEEEEcC-------CCeEEEEEEeec-cchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQ-------GKTTVAVKVFNL-LHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVD 701 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~-------~~~~vavK~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 701 (953)
++..+.+.+|+|+||.|++|.... ....||||..+. ....+.+.+..|+++|+.+ +|+||+.++|+|..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 344566799999999999998631 245799999974 3335678899999999999 69999999999864
Q ss_pred cCCCCceeEEEeeccCCchhhccccCCcCCcccCC----c--cccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCC
Q 043900 702 YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEA----P--RSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPS 775 (953)
Q Consensus 702 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~----~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 775 (953)
.+..++|+||++.|+|.++++..+........ . ..++..+.+.++.|||.|++||++. ++||||+.++
T Consensus 374 ---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 374 ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred ---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 47899999999999999999876611111111 1 2499999999999999999999999 9999999999
Q ss_pred CeEecCCCcEEEeccccceecCCCCCcccc-cccccccccccccccCCCCCCcccchHHHHHHHHHHHh-CCCCCCCccc
Q 043900 776 NVLLDEEMMAHVSDFGLARFLPLSPAQTSS-IDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT-RKKPVDSMFE 853 (953)
Q Consensus 776 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt-g~~pf~~~~~ 853 (953)
|||+.++..+||+|||+|+........... ....-+..|||||.+....|+.++|||||||++||++| |..||.+...
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 999999999999999999976544333211 11113556999999999999999999999999999999 8999875211
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
. .++.++. ..+.|.+.+..|.++++++|+.||+.+|++||++.|+.+.+
T Consensus 528 ~-~~l~~~l------------------------------~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~ 576 (609)
T KOG0200|consen 528 T-EELLEFL------------------------------KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFF 576 (609)
T ss_pred H-HHHHHHH------------------------------hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHH
Confidence 1 0111111 11233444556788999999999999999999999999999
Q ss_pred HHHH
Q 043900 934 QSIK 937 (953)
Q Consensus 934 ~~i~ 937 (953)
+...
T Consensus 577 ~~~l 580 (609)
T KOG0200|consen 577 EKHL 580 (609)
T ss_pred HHHH
Confidence 9853
No 345
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7e-33 Score=299.86 Aligned_cols=278 Identities=23% Similarity=0.274 Sum_probs=198.4
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhc---CCCCeeEEEeeecccccCCCCc
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNI---RHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 707 (953)
|++.+.||+|+||.||+|+++.+++.||+|+++... ......+.+|+.+++++ +|||++++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 677889999999999999998878899999997332 22234566788777666 5999999999986553333345
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.+++|||++ ++|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--------~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l 148 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--------PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKI 148 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEE
Confidence 899999996 488888753221 2589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||.+........ .....++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+......
T Consensus 149 ~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (287)
T cd07838 149 ADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGL 224 (287)
T ss_pred eccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCC
Confidence 99999987643321 12234788999999999999999999999999999999999998753221 112222111110
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........... .... ... ............+.++.+.+++.+||+.||++||+++|++.
T Consensus 225 ~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 225 PSEEEWPRNVS--LPRS-SFP--SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CChHhcCCCcc--cchh-hcc--cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000000 0000 000 00000001111244677889999999999999999999874
No 346
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.1e-33 Score=294.95 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=203.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|+..+.||+|++|.||+|....+++.|++|+++... ....+.+.+|++++++++||||+++++++... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 4778899999999999999999888899999997544 24567889999999999999999999986432 126789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++... ..+++.+++.++.|+++|++|||+. +++|+||+|+||+++.++.++|+|
T Consensus 78 lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d 144 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF----------GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLAD 144 (260)
T ss_pred EEEEecCCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcc
Confidence 999999999999998521 2689999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+................++..|+|||...+..++.++||||||+++|+|++|..||..... ........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~---- 216 (260)
T cd06606 145 FGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKI---- 216 (260)
T ss_pred cccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhc----
Confidence 9999877544321123345688999999999888899999999999999999999999975321 11111000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...... ...+...+.++.+++.+|++.+|++||++.|+++
T Consensus 217 ----~~~~~~------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 217 ----GSSGEP------------------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ----cccCCC------------------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000000 0001123567899999999999999999999985
No 347
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.9e-33 Score=299.79 Aligned_cols=245 Identities=23% Similarity=0.291 Sum_probs=190.6
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++. ..+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-----TKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-----cCCeEEEEEecC
Confidence 699999999999999888899999986422 223456678999999999999999998853 447889999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+..
T Consensus 76 ~~~~L~~~l~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 76 NGGDLKYHIYNVGE--------PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred CCCcHHHHHHHcCc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhh
Confidence 99999999863321 2589999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
.... .......++..|+|||++.+..++.++||||+||++|+|++|+.||....... .............
T Consensus 145 ~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~------ 214 (277)
T cd05577 145 LKGG---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLEMA------ 214 (277)
T ss_pred hccC---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhcccccc------
Confidence 5321 12223457889999999988889999999999999999999999996532211 1111110000000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.......++.+.+++.+||+.||++|| ++.+++.
T Consensus 215 ----------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 215 ----------------------VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ----------------------ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 000012345688999999999999999 5555654
No 348
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.6e-33 Score=309.10 Aligned_cols=285 Identities=21% Similarity=0.266 Sum_probs=200.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 706 (953)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999999888889999998632 2223456789999999999999999999875432 12224
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++|+||+. .++..+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 94 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG------------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred eEEEEecccc-cCHHHHHc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 5789999995 46666541 2578899999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.......
T Consensus 158 L~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~ 231 (342)
T cd07879 158 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVT 231 (342)
T ss_pred EeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhc
Confidence 9999999754321 123457889999999876 468899999999999999999999997532111 111111100
Q ss_pred -CC-chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH--HHHHHHH
Q 043900 866 -LP-DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ--LQSIKNI 939 (953)
Q Consensus 866 -~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~~ 939 (953)
.+ ....+..+..... ..........+..........+.++.+++.+||+.||++||+++|+++. ++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 232 GVPGPEFVQKLEDKAAK---SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred CCCCHHHHHHhcccchH---HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00 0011111000000 0000000000000000011234568899999999999999999999954 7776543
No 349
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.3e-33 Score=307.11 Aligned_cols=281 Identities=20% Similarity=0.237 Sum_probs=200.1
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccC
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 703 (953)
+...+++|++.+.||+|+||.||+|.+..+++.||+|++.. ......+.+.+|++++++++|||++++.++|..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---- 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----
Confidence 44577899999999999999999999998888999998753 222345677899999999999999999998642
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.....++||||+ +++|.++++ ...+++..+..++.|+++||+|||+. +++||||+|+||++++++
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~ 145 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLT-----------SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENC 145 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCC
Confidence 235688999999 568988874 12467888889999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
.+||+|||.+...... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ......
T Consensus 146 ~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~~ 218 (328)
T cd07856 146 DLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSII 218 (328)
T ss_pred CEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999999999754321 122357889999998766 56899999999999999999999999653211 000001
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.........++.+........+.........+..........++++.+++.+|++.+|++|||+++++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 219 TDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111110111111000000000000000000000000011235678999999999999999999998764
No 350
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.1e-33 Score=301.66 Aligned_cols=284 Identities=23% Similarity=0.275 Sum_probs=200.7
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc----
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVD---- 701 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 701 (953)
...++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999999888899999997432 233456778999999999999999999875432
Q ss_pred -cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 702 -YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 702 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
..+....++||||+++ ++..++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~ 150 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---------LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLN 150 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 1123478999999976 666666421 23589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
+++.+||+|||.+........ .......++..|+|||++.+ ..++.++|||||||++|||++|++||..... ...+.
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~ 228 (302)
T cd07864 151 NKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLE 228 (302)
T ss_pred CCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHH
Confidence 999999999999987643321 11222346788999998765 3578999999999999999999999974221 11111
Q ss_pred HHHHhh---CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 860 NFARMA---LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 860 ~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...... .+....++.......... ......+.. .......+..+.+++.+||+.||++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 229 LISRLCGSPCPAVWPDVIKLPYFNTMK--PKKQYRRRL---REEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHhCCCChhhcccccccccccccc--cccccccch---hhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111 010011110000000000 000000000 0011124567899999999999999999999875
No 351
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.1e-33 Score=296.23 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=201.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|++++++++|+||+++.+++. .....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 478899999999999999999888889999998743 2344567789999999999999999998853 347899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||+|+||++++++.+||+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d 146 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKK------KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGD 146 (256)
T ss_pred EEehhcCCCCHHHHHHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEee
Confidence 99999999999999864221 124689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+...... ......++..|+|||.+.+..++.++|+||+|+++||+++|+.||...... ....... ...
T Consensus 147 ~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~---~~~ 217 (256)
T cd08530 147 LGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQ---RGK 217 (256)
T ss_pred ccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh---cCC
Confidence 9999876433 122245788999999999999999999999999999999999999653211 0110000 000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. . ......+.++.+++.+|++.+|++||++.|+++
T Consensus 218 --------~-~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 218 --------Y-P------------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --------C-C------------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0 001134566899999999999999999999975
No 352
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.1e-33 Score=294.25 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=202.5
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++|||++++.+.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 4788899999999999999999888899999997543 245677889999999999999999999853 337889
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+|+||+++++|.+++..... ....+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d 146 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK------EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGD 146 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc------cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECC
Confidence 99999999999999964321 124689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ............
T Consensus 147 ~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 219 (258)
T cd08215 147 FGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQ 219 (258)
T ss_pred ccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCC
Confidence 99998764332 12233458889999999988899999999999999999999999986421 111111110000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.... +...+.++.+++.+||..+|++|||+.|+++
T Consensus 220 --------~~~~-------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 220 --------YPPI-------------------PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --------CCCC-------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 0023456889999999999999999999986
No 353
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.9e-34 Score=325.51 Aligned_cols=260 Identities=23% Similarity=0.313 Sum_probs=191.3
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc------
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD------ 701 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 701 (953)
-..+|+..+.||+||||.||+++.+-+++.||||++... .........+|++.+.+++|||||+++..+.+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 345688889999999999999999999999999999643 4455677889999999999999999985432110
Q ss_pred -------------------------------------------------cC------C----------------------
Q 043900 702 -------------------------------------------------YQ------G---------------------- 704 (953)
Q Consensus 702 -------------------------------------------------~~------~---------------------- 704 (953)
++ .
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 00 0
Q ss_pred -------------------------------CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHH
Q 043900 705 -------------------------------NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVA 753 (953)
Q Consensus 705 -------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~ 753 (953)
....||=||||+..+++++++..... -.....++++++|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---------~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---------SQRDEAWRLFREIL 707 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---------hhhHHHHHHHHHHH
Confidence 02257788888887888777533221 03567899999999
Q ss_pred HHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecC----------------CCCCcccccccccccccccc
Q 043900 754 CALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP----------------LSPAQTSSIDAKGSIGYIAP 817 (953)
Q Consensus 754 ~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~----------------~~~~~~~~~~~~gt~~y~aP 817 (953)
.||+|+|++ |||||||||.||+++++..|||+|||+|+... .+......+..+||.-|+||
T Consensus 708 EGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 708 EGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 999999999 99999999999999999999999999998721 01122344567899999999
Q ss_pred cccCCCC---CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhh
Q 043900 818 EYGLGSE---VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQR 894 (953)
Q Consensus 818 E~~~~~~---~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (953)
|++.+.. |+.|+|+||+|||++||+. ||....+....+...-...+|.. .++.+
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~------------------- 841 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFD------------------- 841 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccc-------------------
Confidence 9987754 9999999999999999995 66642222111111111111111 11111
Q ss_pred hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 895 QARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 895 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...+.=..++.++++.||++||||.|++.
T Consensus 842 --------~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 842 --------PEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred --------ccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 11223457899999999999999999975
No 354
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8.3e-33 Score=303.28 Aligned_cols=276 Identities=19% Similarity=0.171 Sum_probs=190.3
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
.+.+|.| |.||.++...+++.||+|+++.. .....+.+.+|+++++.++||||+++++++. ..+..+++||
T Consensus 7 ~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e 79 (314)
T cd08216 7 GKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSP 79 (314)
T ss_pred hHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEe
Confidence 3344444 45555555557779999998743 3445678999999999999999999999853 4477899999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLA 793 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 793 (953)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 ~~~~~~l~~~l~~~~~--------~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~ 148 (314)
T cd08216 80 LMAYGSCEDLLKTHFP--------EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYS 148 (314)
T ss_pred ccCCCCHHHHHHHhcc--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccc
Confidence 9999999999864321 2578889999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCC-----cccccccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 794 RFLPLSPA-----QTSSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 794 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
........ ........++..|+|||++.+. .++.++|||||||++|||++|+.||............ .....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~ 227 (314)
T cd08216 149 VSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTV 227 (314)
T ss_pred eeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccC
Confidence 75532211 1112234477889999998763 5889999999999999999999999753222111111 11000
Q ss_pred Cchh----hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHV----VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
+... .............. ....................++.+++.+||++||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 228 PCLLDKSTYPLYEDSMSQSRSS--NEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccccccCchhhhcCCcCccccc--ccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00000000000000 0000000011111222445678999999999999999999999874
No 355
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.5e-33 Score=301.00 Aligned_cols=277 Identities=24% Similarity=0.296 Sum_probs=195.3
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++|++.+.||+|++|.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++. .+...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 46889999999999999999999888899999986432 233467889999999999999999999954 44789
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-CCcEEE
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE-EMMAHV 787 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL 787 (953)
++||||++ +++.+++.... ....++..+..++.||+.||+|||+. +++||||+|+||+++. ++.+||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~--------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl 144 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSP--------DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKL 144 (294)
T ss_pred EEEEeccc-ccHHHHHHhCC--------CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEE
Confidence 99999995 57877774221 12357888899999999999999999 9999999999999985 567999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
+|||.+....... .......+++.|+|||++.+. .++.++||||+||++|+|+||+.||......+. ..+.... .
T Consensus 145 ~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~-~ 220 (294)
T PLN00009 145 ADFGLARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRI-L 220 (294)
T ss_pred cccccccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH-h
Confidence 9999997653221 112234578899999987664 578999999999999999999999975322111 1111100 0
Q ss_pred Cchhhhhcccc-ccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDST-LLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........+.. ...+.... ................++++.+++.+|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 221 GTPNEETWPGVTSLPDYKSA---FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCCChhhccccccchhhhhh---cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000000 00000000 0000000000001123466889999999999999999999986
No 356
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.2e-32 Score=293.97 Aligned_cols=253 Identities=20% Similarity=0.216 Sum_probs=196.8
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-----chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-----HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.+|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|++++++++|+||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 4689999999999999999999988889999987532 223456788999999999999999999986432 23
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~----------~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~ 145 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKA----------YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNV 145 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCE
Confidence 567899999999999998852 12478889999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCC-cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPA-QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|||.++....... ........++..|+|||++.+..++.++|||||||++||+++|+.||...... ......
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~ 221 (264)
T cd06653 146 KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAIFKI 221 (264)
T ss_pred EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHHHHH
Confidence 9999999986532111 11112345889999999999888999999999999999999999999742111 110000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ..... ...+....+++.+++.+||+ +|..||++.+++.
T Consensus 222 ~-~~~~~--------------------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 222 A-TQPTK--------------------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred H-cCCCC--------------------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0 00000 00011334668899999998 5799999998765
No 357
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.6e-33 Score=294.73 Aligned_cols=243 Identities=24% Similarity=0.299 Sum_probs=192.2
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||.|++|.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ++...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 699999999999999888899999986432 234567899999999999999999999853 447789999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 76 ~~~~L~~~l~~~----------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~ 142 (262)
T cd05572 76 LGGELWTILRDR----------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKK 142 (262)
T ss_pred CCCcHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccc
Confidence 999999999532 2478899999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
..... ......++..|+|||.+.+..++.++|+||+|+++|++++|..||....... ...... ..+
T Consensus 143 ~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~--------~~~ 208 (262)
T cd05572 143 LKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYND--------ILK 208 (262)
T ss_pred cCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHH--------Hhc
Confidence 64332 2223457889999999988889999999999999999999999997533211 111111 000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCC-----HHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMN-----MTNVVR 931 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 931 (953)
.... ...+...++++.+++.+||+.+|++||+ ++|+++
T Consensus 209 ~~~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 209 GNGK------------------LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cCCC------------------CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0000 0000122457899999999999999999 566554
No 358
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-32 Score=301.71 Aligned_cols=246 Identities=26% Similarity=0.343 Sum_probs=192.7
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
|...+.||+|+||.||+|++..++..||+|++... ..+....+.+|++++++++|||+++++++|.. +...+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCeEE
Confidence 67788999999999999999888889999998632 23344678899999999999999999999643 36789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++ |++.+++... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|
T Consensus 102 lv~e~~~-g~l~~~~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~d 168 (317)
T cd06635 102 LVMEYCL-GSASDLLEVH---------KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLAD 168 (317)
T ss_pred EEEeCCC-CCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEec
Confidence 9999996 4777776421 23588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||++...... ....|++.|+|||++. +..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 169 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~ 241 (317)
T cd06635 169 FGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNES 241 (317)
T ss_pred CCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhccC
Confidence 9998754321 2235888999999873 4578899999999999999999999986421110 0011100000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
+ . ......+..+.+++.+||+.+|.+||++.++++..
T Consensus 242 ~------------~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 P------------T------------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred C------------C------------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 0 0 00012345688999999999999999999999854
No 359
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7.4e-33 Score=305.62 Aligned_cols=284 Identities=20% Similarity=0.226 Sum_probs=196.4
Q ss_pred CCcccCcccccceeeEEEEEEcCC--CeEEEEEEeecc--chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQG--KTTVAVKVFNLL--HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|++.+.||+|+||.||+|.+... +..||+|++... .....+.+.+|+++++++ +||||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 788999998632 222346778899999999 599999999875432 12335
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++++||+. ++|.+++.. ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~k 145 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS----------GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELK 145 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEE
Confidence 6789999985 689888842 23588999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCc--ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH
Q 043900 787 VSDFGLARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~ 863 (953)
|+|||.++........ .......|+..|+|||+..+ ..++.++||||+||++|++++|+.||......+ .......
T Consensus 146 l~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~ 224 (332)
T cd07857 146 ICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQ 224 (332)
T ss_pred eCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHH
Confidence 9999999866432211 11223468999999998765 468999999999999999999999987522111 1111111
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.......+..................................++.+++.+|++.||++|||+.|+++.
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 225 -VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred -HhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000000000000000000000000001224578899999999999999999998753
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.7e-33 Score=309.05 Aligned_cols=284 Identities=19% Similarity=0.235 Sum_probs=198.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc--------
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-------- 701 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 701 (953)
..+|.+.+.||+|+||.||+|....+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999999888899999997665566678889999999999999999998754321
Q ss_pred -cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 702 -YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 702 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
.......++||||++ ++|.+++. ...+++..++.++.||+.||+|||+. +++||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~ 148 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE-----------QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFIN 148 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEc
Confidence 111245789999996 58888773 12578999999999999999999999 999999999999997
Q ss_pred -CCCcEEEeccccceecCCCCCc-ccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCcc
Q 043900 781 -EEMMAHVSDFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMN 857 (953)
Q Consensus 781 -~~~~~kL~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~ 857 (953)
+++.+|++|||.++........ .......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+.
T Consensus 149 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~- 227 (342)
T cd07854 149 TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ- 227 (342)
T ss_pred CCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 4567899999999865322111 11122357889999997654 5688899999999999999999999975322111
Q ss_pred HHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 858 LHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
...... ..+....+.............. ...................++.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 MQLILE-SVPVVREEDRNELLNVIPSFVR-NDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHH-hcCCCChHHhhhhhhhhhhhhh-hcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 111110 0000000000000000000000 00000000000001124467889999999999999999999985
No 361
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1e-32 Score=298.00 Aligned_cols=272 Identities=24% Similarity=0.267 Sum_probs=200.1
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|++.+.||+|++|.||+|....+++.||+|+++.... .....+.+|++++++++|++|+++++++. .+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEE
Confidence 5678899999999999999988888999999864322 34567889999999999999999999853 4478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+++ ++.+++... ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 76 v~e~~~~-~l~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 142 (283)
T cd05118 76 VFEFMDT-DLYKLIKDR---------QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADF 142 (283)
T ss_pred EEeccCC-CHHHHHHhh---------cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeee
Confidence 9999975 888887532 13689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCc-
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPD- 868 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~- 868 (953)
|.+....... .......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||......+ ...... .....
T Consensus 143 ~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~-~~~~~~ 218 (283)
T cd05118 143 GLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIF-RTLGTP 218 (283)
T ss_pred eeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HHcCCC
Confidence 9998765432 122234578899999998776 78999999999999999999999986532211 111111 11110
Q ss_pred ---hhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 869 ---HVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 869 ---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
......+ ........ ................+.++.+++.+||++||.+||+++|++.
T Consensus 219 ~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 219 DPEVWPKFTS-LARNYKFS----FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred chHhcccchh-hhhhhhhh----hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0001000 00000000 0000000011122345778999999999999999999999975
No 362
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.2e-33 Score=295.43 Aligned_cols=244 Identities=21% Similarity=0.256 Sum_probs=186.6
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccch---hhHHHHHHHHHHH-hhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---GAFKSFIAECNTL-KNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.||+|+||.||+|.+...++.||+|+++.... .....+..|..++ ...+|+|++++++++. .++..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 569999999999999988888999999864322 2223445555544 3448999999999853 447899999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||+++++|.++++.. ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||.
T Consensus 77 e~~~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 143 (260)
T cd05611 77 EYLNGGDCASLIKTL----------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGL 143 (260)
T ss_pred eccCCCCHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeeccc
Confidence 999999999998522 2578899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 793 ARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 793 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
++.... .....++..|+|||.+.+..++.++||||+|+++|||++|..||....... ..........
T Consensus 144 ~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~------ 210 (260)
T cd05611 144 SRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRI------ 210 (260)
T ss_pred ceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhccc------
Confidence 975432 123357889999999988889999999999999999999999996432110 0000000000
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
+ . . ......++..+.+++.+||+.+|++||++.++.+.+
T Consensus 211 --~--~---~---------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 211 --N--W---P---------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --C--C---C---------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0 0 0 000012456789999999999999999887665543
No 363
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-32 Score=305.30 Aligned_cols=286 Identities=21% Similarity=0.236 Sum_probs=202.8
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc-
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY- 702 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 702 (953)
+....++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 344677899999999999999999999988889999998532 22334568899999999999999999998653211
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
......++||||+ +++|.+++. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~ 154 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMK-----------HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNED 154 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 1123568999999 779988874 12588999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
+.+||+|||.+...... .....+++.|+|||++.+ ..++.++||||+|+++|++++|+.||....... .....
T Consensus 155 ~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~ 228 (343)
T cd07880 155 CELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEI 228 (343)
T ss_pred CCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 99999999999865321 123357889999998876 458899999999999999999999997532111 11111
Q ss_pred HHhhC--CchhhhhccccccCCchhhhhcccchhh-hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH--HHHHH
Q 043900 862 ARMAL--PDHVVDIVDSTLLSDDEDLAVHGNQRQR-QARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR--QLQSI 936 (953)
Q Consensus 862 ~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~i 936 (953)
..... +......+. ............... .........+++++.+++.+|++.||++|||+.++++ .++..
T Consensus 229 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 229 MKVTGTPSKEFVQKLQ----SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHhcCCCCHHHHHhhc----chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 11000 001111110 000000000000000 0000011234557889999999999999999999984 34444
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.4e-32 Score=295.28 Aligned_cols=242 Identities=21% Similarity=0.242 Sum_probs=183.4
Q ss_pred cccccceeeEEEEEEcCCCeEEEEEEeeccch---hhHHHHHHHH---HHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 638 EIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---GAFKSFIAEC---NTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
.||+|+||.||+|.+..+++.||+|.+..... .....+..|. ..++...||+|+++.+++. ..+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----TPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCEEEEE
Confidence 48999999999999988888999999864321 1112233343 3444457999999998853 44789999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
|||+++|+|.+++.. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 ~e~~~g~~L~~~l~~----------~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 76 LDLMNGGDLHYHLSQ----------HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred EecCCCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCc
Confidence 999999999988842 23589999999999999999999998 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
.+....... .....|+..|+|||++.++ .++.++||||+||++|||++|+.||........ .........
T Consensus 143 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~--- 213 (278)
T cd05606 143 LACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT--- 213 (278)
T ss_pred CccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhc---
Confidence 997653221 1234589999999998754 689999999999999999999999975322111 000000000
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
.+.. .+...+.++.+++.+|+..+|++|| ++.|+++
T Consensus 214 ---~~~~----------------------~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 214 ---MAVE----------------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---cCCC----------------------CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 0000 0012245688999999999999999 9999975
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.4e-33 Score=303.01 Aligned_cols=285 Identities=20% Similarity=0.248 Sum_probs=197.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc---CC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---QG 704 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 704 (953)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 568999999999999999999999888899999986332 2223467789999999999999999988644311 22
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++||||+.+ ++...+... ...+++.++..++.|+++||+|||+. +++||||||+||++++++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~---------~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~ 153 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP---------SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGI 153 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 3467999999965 666666421 23589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcc---------cccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 785 AHVSDFGLARFLPLSPAQT---------SSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
+||+|||+++......... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||.+....
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999997654322111 11233568889999987654 5789999999999999999999999753221
Q ss_pred CccHHHHHHhhCCchhhhhccccccCCchh-hhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 855 DMNLHNFARMALPDHVVDIVDSTLLSDDED-LAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ..................+......... ............ ......+.+.+++.+|++.||++|||+.|++.
T Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 D-QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE---RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred H-HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHH---HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1 1111111100000000000000000000 000000000000 11123367889999999999999999999875
No 366
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-33 Score=321.47 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=188.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCe-EEEEE------------------EeeccchhhHHHHHHHHHHHhhcCCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKT-TVAVK------------------VFNLLHHGAFKSFIAECNTLKNIRHRN 689 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~-~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~n 689 (953)
..++|++.+.||+|+||+||+|..+.... .+++| .++ ........+.+|+.++++++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999988653221 11212 111 11223456889999999999999
Q ss_pred eeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 043900 690 LVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITH 769 (953)
Q Consensus 690 iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 769 (953)
|+++++++. ..+..++|+|++. +++.+++...... ........++..|+.|++.||+|||+. +|+|
T Consensus 225 Iv~l~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~~~-----~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiH 290 (501)
T PHA03210 225 ILKIEEILR-----SEANTYMITQKYD-FDLYSFMYDEAFD-----WKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIH 290 (501)
T ss_pred cCcEeEEEE-----ECCeeEEEEeccc-cCHHHHHhhcccc-----ccccccHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999964 3467899999994 5777776432211 112344667889999999999999999 9999
Q ss_pred ecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC-C
Q 043900 770 CDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKP-V 848 (953)
Q Consensus 770 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p-f 848 (953)
|||||+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+ |
T Consensus 291 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 291 RDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999999999987643222 222345699999999999999999999999999999999998754 4
Q ss_pred CCcccC-CccHHHHHHhh------CCch---hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccC
Q 043900 849 DSMFEG-DMNLHNFARMA------LPDH---VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSME 918 (953)
Q Consensus 849 ~~~~~~-~~~~~~~~~~~------~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 918 (953)
...... ...+.+..... +++. ..+.++...... ........-.....+..+.+++.+|+++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~li~kmL~~ 440 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDH---------AGHSVPPLIRNLGLPADFEYPLVKMLTF 440 (501)
T ss_pred cCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhccc---------CccchhhHHHhcCCChHHHHHHHHHhcc
Confidence 322111 11111111100 1111 011110000000 0000000001112345678889999999
Q ss_pred CCCCCCCHHHHHH
Q 043900 919 SPGDRMNMTNVVR 931 (953)
Q Consensus 919 dP~~RPt~~evl~ 931 (953)
||++|||+.|+++
T Consensus 441 DP~~Rpsa~elL~ 453 (501)
T PHA03210 441 DWHLRPGAAELLA 453 (501)
T ss_pred CcccCcCHHHHhh
Confidence 9999999999986
No 367
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-32 Score=292.18 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=200.3
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch--hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
+|++.+.||+|++|.||+|+...+++.||+|.+..... .....+.+|++++++++||+++++++++. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 47888999999999999999988888999999975443 45678999999999999999999999854 347789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+++++|.+++... ..+++..+..++.|++.|+.|||+. |++||||+|+||+++.++.++|+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~----------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d 142 (254)
T cd06627 76 IILEYAENGSLRQIIKKF----------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLAD 142 (254)
T ss_pred EEEecCCCCcHHHHHHhc----------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 999999999999998522 3689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
||.+......... .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........ ...
T Consensus 143 ~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~ 215 (254)
T cd06627 143 FGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-QDD 215 (254)
T ss_pred cccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-ccC
Confidence 9999876543221 2234588899999998888889999999999999999999999864321 11110000 000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. .. .+...+.++.+++.+||..+|++|||+.|++.
T Consensus 216 ~-----~~----------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 216 H-----PP----------------------LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred C-----CC----------------------CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0 00 00122456889999999999999999999874
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.3e-32 Score=304.88 Aligned_cols=285 Identities=20% Similarity=0.228 Sum_probs=203.4
Q ss_pred HHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccc
Q 043900 623 YQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGV 700 (953)
Q Consensus 623 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 700 (953)
..++...+++|.+.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345667889999999999999999999999888889999998643 222346678899999999999999999987533
Q ss_pred c-cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe
Q 043900 701 D-YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL 779 (953)
Q Consensus 701 ~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 779 (953)
. .......+++++++ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll 153 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 153 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEE
Confidence 2 22234578888887 789988774 12588999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccH
Q 043900 780 DEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNL 858 (953)
Q Consensus 780 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~ 858 (953)
++++.+||+|||+++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 154 ~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~ 227 (345)
T cd07877 154 NEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQL 227 (345)
T ss_pred cCCCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 9999999999999975432 1223457889999998766 46889999999999999999999999642211 111
Q ss_pred HHHHHhhC--CchhhhhccccccCCchhhhhcccchhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 859 HNFARMAL--PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARIN-SKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 859 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
........ +......+... ............+..... .....++++.+++.+|++.||.+||++.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 228 KLILRLVGTPGAELLKKISSE----SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHhCCCCHHHHhhcccH----hHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111110 01111000000 000000000000000000 000134568899999999999999999998865
No 369
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-33 Score=300.14 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=203.6
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
.....|.+...||+|.|+.|..|++..++..||+|.++... ......+.+|+++|+.++|||||+++.+. ...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETE 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eec
Confidence 34567899999999999999999999999999999997543 23345689999999999999999999994 445
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...|+||||+.+|.+.+|+.... ...+..+..++.|+.+|++|+|++ .|||||||++|||++.+..+
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~g----------r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHG----------RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNI 194 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhcc----------cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccce
Confidence 78999999999999999997544 345578889999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCC-CcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEV-SINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
||+|||++.++... ......+|++.|.|||++.|..| ++++|+||+|+++|-|+.|..||++..-.
T Consensus 195 kIaDfgfS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---------- 261 (596)
T KOG0586|consen 195 KIADFGFSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---------- 261 (596)
T ss_pred eeeccccceeeccc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc----------
Confidence 99999999988633 33445679999999999999876 48899999999999999999999863211
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
+.-++.+.+.+ +.+ .-...+..+++++++-.+|.+|++++++.+.
T Consensus 262 -------~Lr~rvl~gk~--------------rIp--~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 262 -------ELRPRVLRGKY--------------RIP--FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -------cccchheeeee--------------ccc--ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 11111111100 000 1123356789999999999999999998763
No 370
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-35 Score=278.25 Aligned_cols=285 Identities=21% Similarity=0.284 Sum_probs=202.7
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc---CCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY---QGN 705 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~ 705 (953)
..|....+||+|.||+||+|+.+++++.||+|++- ...++......+|++++..++|+|++.+++.|....- ...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45667789999999999999999999999998763 2334445667899999999999999999999865432 223
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++||.+|+. +|...+... ...++..++.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~---------~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR---------KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGIL 163 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc---------cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceE
Confidence 458999999965 888887422 24689999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCC--CcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 786 HVSDFGLARFLPLSP--AQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 786 kL~DfG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
||+|||+|+.+.... .....+..+.|.+|++||.+.|. .|+++.|||+.|||+.||+||.+-+.+..+.. ..+..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq--ql~~I 241 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ--QLHLI 241 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH--HHHHH
Confidence 999999997664322 22334566679999999987775 69999999999999999999999887643321 12222
Q ss_pred Hhh----CCchhhhhccccccCCchhh-hhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 863 RMA----LPDHVVDIVDSTLLSDDEDL-AVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 863 ~~~----~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... .++.+..+..-.+....+.. ...+..+....+.. +..-.++..+++..++..||.+||++++++.
T Consensus 242 s~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k-p~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 242 SQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK-PYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc-cccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 221 11111111110000000000 00000010001100 0011235678999999999999999999875
No 371
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-32 Score=296.71 Aligned_cols=275 Identities=21% Similarity=0.241 Sum_probs=194.9
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccch-hhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-GAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|.+.+.||+|++|+||+|+...+++.||+|++..... .......+|+..+++++ |||++++++++. .++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 6678899999999999999988888999999864322 22334567899999998 999999999854 3578999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||+ +|+|.+++.... ...+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+||
T Consensus 76 v~e~~-~~~l~~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~ 143 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK--------GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADF 143 (283)
T ss_pred EEecC-CCCHHHHHHhcc--------cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeec
Confidence 99999 889998885322 23689999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccC-CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGL-GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
|.+........ .....++..|+|||++. +..++.++||||||+++|||++|+.||......+. ..... ......
T Consensus 144 ~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~-~~~~~~ 218 (283)
T cd07830 144 GLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKIC-SVLGTP 218 (283)
T ss_pred ccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHH-HhcCCC
Confidence 99986643222 22345788999999875 44678999999999999999999999865322111 11110 011000
Q ss_pred hhh-hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 870 VVD-IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 870 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..+ ..+.................. .........+.++.+++.+||+.||++|||++|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 219 TKQDWPEGYKLASKLGFRFPQFAPT--SLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ChhhhhhHhhhhccccccccccccc--cHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 000000000000000000000 000000112467899999999999999999999875
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.4e-33 Score=308.52 Aligned_cols=281 Identities=19% Similarity=0.231 Sum_probs=200.1
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc-CC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY-QG 704 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~ 704 (953)
...++|++.+.||+|++|.||+|.+..+++.||+|++... .......+.+|+.++++++|||++++.+++..... ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3467899999999999999999999988889999998642 23344667789999999999999999887543211 22
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....++|+||+ +++|.+++.. ..+++.++..++.|++.||+|||+. ||+||||||+||++++++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~-----------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~ 156 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC-----------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCE 156 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCC
Confidence 23589999999 6799998852 3589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCC-CCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHH
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG-SEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFAR 863 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~ 863 (953)
+||+|||.+...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||......+ .+.....
T Consensus 157 ~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~ 230 (343)
T cd07851 157 LKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMN 230 (343)
T ss_pred EEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 999999999865322 223457889999998765 367899999999999999999999996432110 0111110
Q ss_pred hhCCchhhhhccccccCCchhhhhcccchhhhhhhh-hHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 864 MALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARIN-SKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 864 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........+............ ............. .....+.++.+++.+|++.||++|||+.||++
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 231 -LVGTPDEELLQKISSESARNY-IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred -hcCCCCHHHHhhccchhHHHH-HHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 010000011100000000000 0000000000010 01123567999999999999999999999976
No 373
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.2e-32 Score=299.03 Aligned_cols=253 Identities=23% Similarity=0.291 Sum_probs=191.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ......+..|+.++.+. .||||++++++|.. ...
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----DSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----CCe
Confidence 356888999999999999999999878899999997432 23445566777777676 49999999999643 467
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
.++||||++ +++.++.... ...+++..+..++.|++.|++|||+ . +|+||||+|+||++++++.+|
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~k 155 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRI---------QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVK 155 (296)
T ss_pred EEEEeeccC-cCHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEE
Confidence 999999985 4676666321 2268899999999999999999997 5 899999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCC----CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE----VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
|+|||.+..+..... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.........+...
T Consensus 156 L~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~- 231 (296)
T cd06618 156 LCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKI- 231 (296)
T ss_pred ECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHH-
Confidence 999999976543221 12234788999999987654 7889999999999999999999986421111001100
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
....... . . ....++.++.+++.+||+.||++||+++++++.
T Consensus 232 ---~~~~~~~-----~-~-------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 232 ---LQEEPPS-----L-P-------------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ---hcCCCCC-----C-C-------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 0 0 000234568999999999999999999999764
No 374
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.9e-33 Score=296.08 Aligned_cols=247 Identities=23% Similarity=0.321 Sum_probs=192.9
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccch---hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLHH---GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++|||++++++.+ ..+...++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999998888999999864332 4456788999999999999999998874 3457889999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++..
T Consensus 76 ~~~~L~~~l~~~----------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~ 142 (265)
T cd05579 76 PGGDLASLLENV----------GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKV 142 (265)
T ss_pred CCCcHHHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchh
Confidence 999999998521 2589999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCC------cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCch
Q 043900 796 LPLSPA------QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDH 869 (953)
Q Consensus 796 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 869 (953)
...... ........++..|+|||...+..++.++||||||+++||+++|..||...... .........
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~- 216 (265)
T cd05579 143 GLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNG- 216 (265)
T ss_pred cccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcC-
Confidence 433211 11223345788999999998888999999999999999999999999643211 111000000
Q ss_pred hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHH
Q 043900 870 VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQ 934 (953)
Q Consensus 870 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 934 (953)
.. . .......+.++.+++.+||+.+|++|||+.++.+.|+
T Consensus 217 -------~~-~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 217 -------KI-E-----------------WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -------Cc-C-----------------CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00 0 0000012567889999999999999999966655443
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.9e-32 Score=298.87 Aligned_cols=248 Identities=26% Similarity=0.338 Sum_probs=193.0
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
..|...+.||+|+||.||+|++..+++.||+|.+.. .......++.+|+++++.++|+|++++.+++.. ...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 347777899999999999999988888999999863 223345678899999999999999999998643 367
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++||||+. |++.+++... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~---------~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl 156 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVH---------KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 156 (308)
T ss_pred eEEEEEccC-CCHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEE
Confidence 899999996 5777776421 22478999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|||++...... ....++..|+|||++. ...++.++|||||||++|||++|..||....... ........
T Consensus 157 ~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~ 229 (308)
T cd06634 157 GDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN 229 (308)
T ss_pred CCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhc
Confidence 999999765322 2235788999999874 3567889999999999999999999986421110 00000000
Q ss_pred hCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 865 ALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 865 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
..+. . .....+..+.+++.+||+.+|++||+++++++.-
T Consensus 230 ~~~~---------~---------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 230 ESPA---------L---------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred CCCC---------c---------------------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0000 0 0012345688999999999999999999998753
No 376
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.5e-32 Score=300.96 Aligned_cols=278 Identities=20% Similarity=0.277 Sum_probs=195.1
Q ss_pred hcCCcc-cCcccccceeeEEEEEEcCCCeEEEEEEeeccchhh--------------HHHHHHHHHHHhhcCCCCeeEEE
Q 043900 630 TDGFAS-ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGA--------------FKSFIAECNTLKNIRHRNLVKIL 694 (953)
Q Consensus 630 ~~~~~~-~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~ 694 (953)
.++|.. .+.||+|+||+||+|.+..+++.||+|+++...... ...+.+|++++++++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456654 467999999999999999888899999986432211 12577899999999999999999
Q ss_pred eeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCC
Q 043900 695 TACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKP 774 (953)
Q Consensus 695 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 774 (953)
+++. ..+..++||||++ |+|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|
T Consensus 87 ~~~~-----~~~~~~lv~e~~~-~~l~~~l~~----------~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~ 147 (335)
T PTZ00024 87 DVYV-----EGDFINLVMDIMA-SDLKKVVDR----------KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSP 147 (335)
T ss_pred EEEe-----cCCcEEEEEeccc-cCHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9954 3478899999996 689888842 23588999999999999999999999 999999999
Q ss_pred CCeEecCCCcEEEeccccceecCCCC------------CcccccccccccccccccccCCC-CCCcccchHHHHHHHHHH
Q 043900 775 SNVLLDEEMMAHVSDFGLARFLPLSP------------AQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLEL 841 (953)
Q Consensus 775 ~NIll~~~~~~kL~DfG~a~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~el 841 (953)
+||+++.++.+||+|||.+....... .........++..|+|||++.+. .++.++||||+||++|||
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 148 ANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred HHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999998664111 01111223467889999998764 468999999999999999
Q ss_pred HhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCC
Q 043900 842 VTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPG 921 (953)
Q Consensus 842 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 921 (953)
++|+.||......+ .+..............+.+....+..... ....+..........+.++.+++.+||+.+|+
T Consensus 228 ~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 302 (335)
T PTZ00024 228 LTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEF----TPRKPKDLKTIFPNASDDAIDLLQSLLKLNPL 302 (335)
T ss_pred HhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhccccccc----CcCCcccHHHhCcCCChHHHHHHHHHcCCCch
Confidence 99999997532211 11111110000000000000000000000 00000000001112356788999999999999
Q ss_pred CCCCHHHHHH
Q 043900 922 DRMNMTNVVR 931 (953)
Q Consensus 922 ~RPt~~evl~ 931 (953)
+|||++|++.
T Consensus 303 ~R~s~~~~l~ 312 (335)
T PTZ00024 303 ERISAKEALK 312 (335)
T ss_pred hccCHHHHhc
Confidence 9999999986
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-32 Score=296.29 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=199.4
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCC
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 706 (953)
++|.+.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|++++++++ ||||+++++++ ..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 3688999999999999999999988889999998642 2334567889999999998 99999999884 4457
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK----------YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEE
Confidence 89999999999999999952 22689999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCc------------------ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCC
Q 043900 787 VSDFGLARFLPLSPAQ------------------TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPV 848 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf 848 (953)
++|||.+......... .......++..|+|||+..+..++.++||||+|+++|++++|+.||
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 222 (280)
T cd05581 143 ITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222 (280)
T ss_pred ecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence 9999999876433211 1222345788999999998888999999999999999999999999
Q ss_pred CCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCH--
Q 043900 849 DSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNM-- 926 (953)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-- 926 (953)
...... ... . ...+.. ...+...++.+.+++.+||+.+|++||++
T Consensus 223 ~~~~~~----~~~-~--------~~~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 269 (280)
T cd05581 223 RGSNEY----LTF-Q--------KILKLE--------------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNE 269 (280)
T ss_pred CCccHH----HHH-H--------HHHhcC--------------------CCCCCccCHHHHHHHHHHhcCCHhhCCCccc
Confidence 753210 000 0 000000 00001224568899999999999999999
Q ss_pred --HHHHH
Q 043900 927 --TNVVR 931 (953)
Q Consensus 927 --~evl~ 931 (953)
+|+++
T Consensus 270 ~~~~ll~ 276 (280)
T cd05581 270 GYDELKA 276 (280)
T ss_pred CHHHHhc
Confidence 77654
No 378
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.4e-32 Score=295.34 Aligned_cols=245 Identities=27% Similarity=0.348 Sum_probs=190.3
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
|...+.||+|+||.||+|++..+++.||+|++... .......+.+|+++++.++|||++++++++.+ ....+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 66678899999999999999888889999998632 22344578889999999999999999999643 36789
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||+. |++.+++... ...+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.+||+|
T Consensus 98 lv~e~~~-~~l~~~l~~~---------~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~d 164 (313)
T cd06633 98 LVMEYCL-GSASDLLEVH---------KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLAD 164 (313)
T ss_pred EEEecCC-CCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEee
Confidence 9999995 5777776421 23588999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||.+..... .....|+..|+|||++. +..++.++|||||||++|||++|..||........ .........
T Consensus 165 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~ 237 (313)
T cd06633 165 FGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNDS 237 (313)
T ss_pred cCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhcCC
Confidence 999864321 12345888999999974 45688999999999999999999999865321110 000000000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
+. . .....+..+.+++.+||+.+|++||++.+++..
T Consensus 238 ~~---------~---------------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 PT---------L---------------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CC---------C---------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0 000223458899999999999999999999863
No 379
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-33 Score=274.28 Aligned_cols=201 Identities=24% Similarity=0.323 Sum_probs=174.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.++|...+++|+|.||.|.+++-+.+++.+|+|+++.. ..++...-..|-++++..+||.+..+.-. ++..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 46788899999999999999999999999999999742 23344556678899999999998877644 67779
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..|.||||+.||.|.-++.. .+.+++....-+...|+.||.|||++ +||.||+|.+|.|+|.+|.+|
T Consensus 242 rlCFVMeyanGGeLf~HLsr----------er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIK 308 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSR----------ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIK 308 (516)
T ss_pred eEEEEEEEccCceEeeehhh----------hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceE
Confidence 99999999999999999853 34688888888999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|+|||+++.-- .........+|||.|.|||++....|+.+.|.|.+|||+|||++|+.||..
T Consensus 309 itDFGLCKE~I--~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 309 ITDFGLCKEEI--KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred eeecccchhcc--cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 99999997432 223344567899999999999999999999999999999999999999975
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=4.5e-32 Score=288.81 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=193.4
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-----chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-----HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
+|.+.+.||+|+||.||+|.+...+..+++|+.+.. .......+.+|+.++++++||||+++++++. +..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCC
Confidence 588889999999999999999877666777776531 1223345678999999999999999998853 346
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++..... ....+++.+++.++.|++.|+.|||+. +++|+||+|+||+++. +.+|
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~ 145 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKH------TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLK 145 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhh------cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEe
Confidence 78999999999999998853221 234689999999999999999999999 9999999999999975 5699
Q ss_pred EeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 787 VSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 787 L~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
|+|||.+........ ......|++.|+|||...+..++.++||||||+++|+|++|..||..... ........
T Consensus 146 l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~ 218 (260)
T cd08222 146 IGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIV 218 (260)
T ss_pred ecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHH
Confidence 999999987643221 22234578899999998888899999999999999999999999863211 11111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... . ......++.++.+++.+||+.+|++||++.|+++
T Consensus 219 ~~~--------~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 219 EGP--------T-------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cCC--------C-------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 000 0 0001134567889999999999999999999976
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=4.9e-32 Score=293.16 Aligned_cols=257 Identities=21% Similarity=0.209 Sum_probs=195.9
Q ss_pred CCcccCcccccceeeEEEEEEc---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 632 GFASANEIGVGSFGSVYKGILD---QGKTTVAVKVFNLLH----HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|++++.++ +||+|+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999864 345689999986422 22345678999999999 599999999874 4
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.+...++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~----------~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQ----------REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEG 142 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhh----------cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence 45778999999999999999852 23578899999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCCC--CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSE--VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
.++|+|||+++........ ......|+..|+|||...+.. .+.++||||||+++|||++|..||...... ......
T Consensus 143 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~ 220 (288)
T cd05583 143 HVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEI 220 (288)
T ss_pred CEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHH
Confidence 9999999999765432211 122345889999999987765 788999999999999999999998632111 011111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSI 936 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 936 (953)
....... . ...+...+..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 221 ~~~~~~~--------~--------------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 221 SRRILKS--------K--------------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHcc--------C--------------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1110000 0 000112345688999999999999999998887766553
No 382
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=6.9e-32 Score=291.29 Aligned_cols=271 Identities=23% Similarity=0.300 Sum_probs=198.1
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKAL 710 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 710 (953)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|++++++++|++++++++++. ..+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 566788999999999999999888899999997542 334567788999999999999999999854 3478999
Q ss_pred EEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecc
Q 043900 711 VFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDF 790 (953)
Q Consensus 711 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 790 (953)
||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+||
T Consensus 76 v~e~~~-~~l~~~i~~~~---------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~ 142 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP---------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADF 142 (282)
T ss_pred EecCcC-cCHHHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecC
Confidence 999997 58999996321 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC---
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL--- 866 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~--- 866 (953)
|.++....... ......++..|+|||.+.+. .++.++|||||||++||+++|+.||......+ ..........
T Consensus 143 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (282)
T cd07829 143 GLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPT 219 (282)
T ss_pred CcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCc
Confidence 99986643221 22233467789999998776 88999999999999999999999986532111 1111111100
Q ss_pred Cchhhhhcccc-ccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDST-LLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+.......+.. ....... ...... .......+..+.+++.+||+.||++||++++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 220 EESWPGVTKLPDYKPTFPK----FPPKDL---EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHhhcccccccccccc----cCccch---HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00011110000 0000000 000000 0001122567999999999999999999999975
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3e-32 Score=302.68 Aligned_cols=266 Identities=22% Similarity=0.263 Sum_probs=216.2
Q ss_pred CHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccc
Q 043900 622 SYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGV 700 (953)
Q Consensus 622 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 700 (953)
.++.+...++.|.+.++||.|.+|.||+++...+++.+|+|+.....+ ..++...|.++++.. .|||++.++|++.-.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344444567789999999999999999999999999999999875544 345677888999888 699999999998766
Q ss_pred ccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 701 DYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 701 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
....++..|+|||||.+|+..++++... ...+.|..+.-|++.++.|+.+||.+ .++|||||-.|||++
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~--------g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT 157 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK--------GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLT 157 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc--------ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEe
Confidence 6667789999999999999999997544 34799999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCCcccccccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCcccCC
Q 043900 781 EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-----EVSINGDVYSYGILLLELVTRKKPVDSMFEGD 855 (953)
Q Consensus 781 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~pf~~~~~~~ 855 (953)
.++.|||+|||.+..... +-.......||+.|||||++... .|+.++|+||+|++..||.-|.+|+.++....
T Consensus 158 ~e~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr 235 (953)
T KOG0587|consen 158 ENAEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR 235 (953)
T ss_pred ccCcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence 999999999999987642 33344456799999999997543 57788999999999999999999987643321
Q ss_pred ccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 856 MNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. .+ .-.+.++.....+..-..++.+++..|+.+|.++||++.++++
T Consensus 236 a--------LF----------------------~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 A--------LF----------------------LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred h--------hc----------------------cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0 00 0011222223334455678999999999999999999999875
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-33 Score=284.73 Aligned_cols=260 Identities=23% Similarity=0.336 Sum_probs=200.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-------chhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-------HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
.++|-....||+|||+.||+|.+...++.||||+-... .....+...+|..+-+.++||.||++|+++.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs---- 537 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS---- 537 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee----
Confidence 45788889999999999999999999999999987421 1122356778999999999999999999974
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec--
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD-- 780 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-- 780 (953)
-+.+.+|-|+|||+|-+|.-|++.. +.+++.++..|+.||+.||.||.+. +++|||-||||.|||+.
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQh----------klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~G 606 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQH----------KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNG 606 (775)
T ss_pred eccccceeeeeecCCCchhHHHHhh----------hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecC
Confidence 3447789999999999999999643 4689999999999999999999986 78999999999999994
Q ss_pred -CCCcEEEeccccceecCCCCCc-----ccccccccccccccccccCCC----CCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 781 -EEMMAHVSDFGLARFLPLSPAQ-----TSSIDAKGSIGYIAPEYGLGS----EVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 781 -~~~~~kL~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
..|.+||+|||+++++..+... .......||++|.+||.+.-+ +.+.|+||||.||++|+.+.|+.||..
T Consensus 607 tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 607 TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 5678999999999998655433 222345699999999986533 578899999999999999999999975
Q ss_pred cccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 851 MFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
..... ....... ++...- -.++..+....+..+++++|+++--++|....++.
T Consensus 687 nqsQQ----dILqeNT------IlkAtE-----------------VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 687 NQSQQ----DILQENT------ILKATE-----------------VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred chhHH----HHHhhhc------hhccee-----------------ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 32211 1111000 000000 00111123455678899999999999998888876
Q ss_pred H
Q 043900 931 R 931 (953)
Q Consensus 931 ~ 931 (953)
.
T Consensus 740 ~ 740 (775)
T KOG1151|consen 740 C 740 (775)
T ss_pred c
Confidence 4
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=8.7e-32 Score=320.44 Aligned_cols=147 Identities=28% Similarity=0.400 Sum_probs=129.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 706 (953)
.++|.+.++||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++. ...
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----ECC
Confidence 35799999999999999999999988889999999643 2333467889999999999999999998853 347
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
..++||||+++++|.+++... ..+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~----------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY----------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEE
Confidence 899999999999999998521 2478889999999999999999998 999999999999999999999
Q ss_pred Eeccccce
Q 043900 787 VSDFGLAR 794 (953)
Q Consensus 787 L~DfG~a~ 794 (953)
|+|||+++
T Consensus 145 L~DFGls~ 152 (669)
T cd05610 145 LTDFGLSK 152 (669)
T ss_pred EEeCCCCc
Confidence 99999986
No 386
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.9e-31 Score=288.90 Aligned_cols=252 Identities=22% Similarity=0.253 Sum_probs=191.2
Q ss_pred CCcccCcccccceeeEEEEEEc---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 632 GFASANEIGVGSFGSVYKGILD---QGKTTVAVKVFNLLH----HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
+|++.+.||+|+||.||+|... .+++.||+|+++... ....+.+.+|+.+++++ +|++|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999974 356789999986432 22346678899999999 599999999884 3
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.+...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQ----------RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNG 142 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCC
Confidence 44678999999999999999852 23578889999999999999999998 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNF 861 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~ 861 (953)
.+||+|||++........ .......|+..|+|||.+.+. .++.++||||||+++|+|++|..||...... ......
T Consensus 143 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~ 220 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEI 220 (290)
T ss_pred CEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHH
Confidence 999999999986543221 122234588999999998753 4678999999999999999999998632111 111111
Q ss_pred HHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC-----CHHHHHH
Q 043900 862 ARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM-----NMTNVVR 931 (953)
Q Consensus 862 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 931 (953)
........ .. .+..+++.+.+++.+||+.||++|| ++++++.
T Consensus 221 ~~~~~~~~---------~~-------------------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 221 SRRILKSE---------PP-------------------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHhhccC---------CC-------------------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11110000 00 0012345688999999999999997 6666655
No 387
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=295.19 Aligned_cols=240 Identities=21% Similarity=0.223 Sum_probs=192.0
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCce
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
++.|.....+|.|+|+.|-.+.+..+.+..+||++.... .+..+|+.++... +||||+++.+.| .++.+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeeccee-----cCCcee
Confidence 556788888999999999999999999999999996542 2334567666666 799999999994 456889
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe-cCCCcEEE
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL-DEEMMAHV 787 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kL 787 (953)
|+|||++.++-+.+.+... .....++..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|
T Consensus 392 ~~v~e~l~g~ell~ri~~~-----------~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrl 457 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSK-----------PEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRL 457 (612)
T ss_pred eeeehhccccHHHHHHHhc-----------chhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEE
Confidence 9999999998887777421 222367788999999999999999 99999999999999 58999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
+|||.++..... ....+-|..|.|||+.....|++++|+||||++||+|++|+.||.....+ ..+.....
T Consensus 458 tyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~---- 527 (612)
T KOG0603|consen 458 TYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQ---- 527 (612)
T ss_pred EEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhc----
Confidence 999999876433 33445788999999999999999999999999999999999999753222 11111000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
........+++..+++.+|++.||.+||+|.|+..
T Consensus 528 -----------------------------~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 528 -----------------------------MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -----------------------------CCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 00111245677889999999999999999999865
No 388
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-33 Score=271.80 Aligned_cols=254 Identities=26% Similarity=0.299 Sum_probs=190.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEEee
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVFEF 714 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 714 (953)
..||.|+||+|++-.++..++..|||+++... ..+.+++..|.+...+- ++|+||+++|.+.. .+.-||.||.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdcWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDCWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCceeeeHHH
Confidence 56999999999999999999999999998544 35667888888865544 79999999999643 3668999999
Q ss_pred ccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccce
Q 043900 715 MQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLAR 794 (953)
Q Consensus 715 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 794 (953)
| ..++..+-+... ......+++..+-+|+...+.||.||-.. ..|+|||+||+|||++..|.+||||||.+.
T Consensus 145 M-d~SlDklYk~vy-----~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 145 M-DISLDKLYKRVY-----SVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred H-hhhHHHHHHHHH-----HHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchH
Confidence 9 446655543211 12234688888899999999999999876 389999999999999999999999999997
Q ss_pred ecCCCCCcccccccccccccccccccCCC--CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh
Q 043900 795 FLPLSPAQTSSIDAKGSIGYIAPEYGLGS--EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD 872 (953)
Q Consensus 795 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 872 (953)
.+..+ ...+...|-..|||||.+... .|+-+|||||+|+++||+.||..||..... .+.+...-..
T Consensus 217 qLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~------ 284 (361)
T KOG1006|consen 217 QLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVI------ 284 (361)
T ss_pred hHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHc------
Confidence 66432 223345688999999987643 488999999999999999999999864211 1111111111
Q ss_pred hccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 873 IVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 873 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
+++.. -.......+....+.+++..|+.+|-.+||...++.+.
T Consensus 285 -------gdpp~----------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 285 -------GDPPI----------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred -------CCCCe----------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11100 00001112456679999999999999999999998764
No 389
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=277.42 Aligned_cols=283 Identities=22% Similarity=0.256 Sum_probs=204.5
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC--------CCCeeEEEeeeccccc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR--------HRNLVKILTACSGVDY 702 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~~~~~ 702 (953)
.+|.+.++||.|.|++||+|-+..+++.||+|+.+... ...+....|++++++++ ..+||++++.|... .
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs-G 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS-G 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-C
Confidence 57999999999999999999999999999999997533 33456788999999983 24799999998654 6
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
.++.++|||+|++ |.+|..++..... +.++...+.+|++||+.||.|||..| ||||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y--------rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY--------RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST 224 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC--------CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence 7788999999999 7799998875443 37999999999999999999999987 99999999999998000
Q ss_pred --------------------------------------------------------------------------------
Q 043900 783 -------------------------------------------------------------------------------- 782 (953)
Q Consensus 783 -------------------------------------------------------------------------------- 782 (953)
T Consensus 225 e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n 304 (590)
T KOG1290|consen 225 EIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYN 304 (590)
T ss_pred ccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 043900 783 -------------------------------------------------------------------------------- 782 (953)
Q Consensus 783 -------------------------------------------------------------------------------- 782 (953)
T Consensus 305 ~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~ 384 (590)
T KOG1290|consen 305 NEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDI 384 (590)
T ss_pred cccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCC
Confidence
Q ss_pred ------CcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCccc---
Q 043900 783 ------MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFE--- 853 (953)
Q Consensus 783 ------~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~--- 853 (953)
-+|||+|||-|+.+. ...+....|..|+|||++.|..|++.+||||++|++|||+||...|+.-..
T Consensus 385 ~~~~~di~vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y 459 (590)
T KOG1290|consen 385 PLPECDIRVKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENY 459 (590)
T ss_pred CCCccceeEEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCC
Confidence 024566666665432 122334478899999999999999999999999999999999999975322
Q ss_pred --CCccHHHHHHhh--CCc-------hhhhhccccccC-CchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCC
Q 043900 854 --GDMNLHNFARMA--LPD-------HVVDIVDSTLLS-DDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPG 921 (953)
Q Consensus 854 --~~~~~~~~~~~~--~~~-------~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 921 (953)
++..+..++... +|. ...+++++.-.- .......=.....-...+....+...++.+++.-|++.+|+
T Consensus 460 ~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~Pe 539 (590)
T KOG1290|consen 460 SRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPE 539 (590)
T ss_pred CccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcc
Confidence 122222222211 111 122222211000 00000000000111122334456778899999999999999
Q ss_pred CCCCHHHHHH
Q 043900 922 DRMNMTNVVR 931 (953)
Q Consensus 922 ~RPt~~evl~ 931 (953)
+||||.+.++
T Consensus 540 KR~tA~~cl~ 549 (590)
T KOG1290|consen 540 KRPTAAQCLK 549 (590)
T ss_pred ccccHHHHhc
Confidence 9999999885
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.5e-31 Score=281.40 Aligned_cols=237 Identities=27% Similarity=0.300 Sum_probs=189.6
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeec
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFM 715 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 715 (953)
||+|+||.||+|.....++.||+|+++... ......+..|++++++++|||++++++.+ ..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 699999999999998878899999986432 22456788999999999999999999884 4557899999999
Q ss_pred cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccccee
Q 043900 716 QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 716 ~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
++++|.+++.. ...+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+..
T Consensus 76 ~~~~L~~~l~~----------~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 142 (250)
T cd05123 76 PGGELFSHLSK----------EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKE 142 (250)
T ss_pred CCCcHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCccee
Confidence 99999999852 22588999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 796 LPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 796 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
..... .......++..|+|||...+..++.++|+||||+++||+++|..||..... ..........
T Consensus 143 ~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~------- 208 (250)
T cd05123 143 LSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKD------- 208 (250)
T ss_pred cccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcC-------
Confidence 64321 122344578899999999888899999999999999999999999964221 1111111000
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTN 928 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 928 (953)
.. ..+...+.++.+++.+||..||++||++.+
T Consensus 209 -~~--------------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 209 -PL--------------------RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred -CC--------------------CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 00 000012456889999999999999999954
No 391
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=284.63 Aligned_cols=244 Identities=24% Similarity=0.313 Sum_probs=189.0
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEe
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
.+++|+|.||+||-|.++.+++.||||++.+. .......+.+|+.+++.++||.||.+.-.| +..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceEEEEeh
Confidence 47899999999999999999999999999632 233457889999999999999999998774 44588999999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC---CcEEEecc
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE---MMAHVSDF 790 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Df 790 (953)
-+.| +..+.+-... ..++++..-.-+..||+.||.|||.+ +|||+||||+|||+... -++|||||
T Consensus 644 Kl~G-DMLEMILSsE--------kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDF 711 (888)
T KOG4236|consen 644 KLHG-DMLEMILSSE--------KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDF 711 (888)
T ss_pred hhcc-hHHHHHHHhh--------cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccc
Confidence 9955 5555553222 23688888888999999999999999 99999999999999643 38999999
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
|+|+++++. ......+||+.|.|||++....|...-|+||.||++|.-++|..||....+-...+...+.+ +|..
T Consensus 712 GfARiIgEk---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM-yPp~- 786 (888)
T KOG4236|consen 712 GFARIIGEK---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM-YPPN- 786 (888)
T ss_pred cceeecchh---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc-cCCC-
Confidence 999998643 33445679999999999999999999999999999999999999997422111111111111 1111
Q ss_pred hhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVV 930 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 930 (953)
.+.++.++..+++...++..-.+|-+.++-+
T Consensus 787 -----------------------------PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 787 -----------------------------PWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred -----------------------------chhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1124455667777788888778887776543
No 392
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-32 Score=310.64 Aligned_cols=206 Identities=26% Similarity=0.328 Sum_probs=178.5
Q ss_pred HHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeeccccc
Q 043900 626 LYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDY 702 (953)
Q Consensus 626 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 702 (953)
+.-..++|.+.++||+|+||.|..++.+.+++.||.|++.. .......-|..|-.+|..-+.+=|+.+.-. |
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA-----F 144 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA-----F 144 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH-----h
Confidence 33456789999999999999999999999999999999964 334445678889999988888888888655 7
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE 782 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 782 (953)
+++.+.|+|||||+||||-..+.... .+++..++-++..|+-||.-+|+. |+|||||||+|||+|..
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~~----------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~ 211 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKFD----------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKS 211 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhcC----------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEeccc
Confidence 88899999999999999999996332 588888899999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcccccccccccccccccccC----C-CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 783 MMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL----G-SEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 783 ~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
|++||+|||.+-.+..+ ....+...+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||..
T Consensus 212 GHikLADFGsClkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 212 GHIKLADFGSCLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred CcEeeccchhHHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 99999999999877543 344555678999999999864 3 5789999999999999999999999974
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=7.8e-31 Score=303.88 Aligned_cols=277 Identities=19% Similarity=0.155 Sum_probs=173.2
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCC----CeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecc-cccC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQG----KTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSG-VDYQ 703 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 703 (953)
..++|.+.+.||+|+||.||+|++..+ +..||+|++...... +....| .+....+.+++.++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 789999987643221 111111 1122222222222221111 1113
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCc----------ccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDK----------TEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLK 773 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~----------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 773 (953)
.+...++||||+++++|.+++........ ............+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 45778999999999999999864321100 000111223445678999999999999998 99999999
Q ss_pred CCCeEecC-CCcEEEeccccceecCCCCCcccccccccccccccccccCCC----------------------CCCcccc
Q 043900 774 PSNVLLDE-EMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS----------------------EVSINGD 830 (953)
Q Consensus 774 p~NIll~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sD 830 (953)
|+|||++. ++.+||+|||+|+.+..... .......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 57999999999986543221 222345689999999965322 2345679
Q ss_pred hHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC--Cch---hhhhccccccCCchhhhhcccchhhhhhhhhHHHHH
Q 043900 831 VYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL--PDH---VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECL 905 (953)
Q Consensus 831 v~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (953)
||||||++|||+++..|++.. ...+..... ... +.....+....+. ...+.......
T Consensus 362 VwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~d~~~ 423 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRNDYDLVAWRKLVEPRASPDL------------RRGFEVLDLDG 423 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhcCCcHHHHHHhhccccchhh------------hhhhhhccccc
Confidence 999999999999977665421 111111000 000 1111111000000 00000000112
Q ss_pred HHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 906 VAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 906 ~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+..+++.+|++.||++|||++|+++
T Consensus 424 ~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 424 GAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred hHHHHHHHHHccCCcccCCCHHHHhC
Confidence 34568999999999999999999987
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=5.8e-31 Score=275.55 Aligned_cols=223 Identities=21% Similarity=0.143 Sum_probs=174.7
Q ss_pred cceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccCCchh
Q 043900 642 GSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLE 721 (953)
Q Consensus 642 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 721 (953)
|.+|.||+|.+..+++.||+|+++... .+.+|...+....|||++++++++. ..+..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence 899999999999999999999996532 2234445555567999999999853 447899999999999999
Q ss_pred hccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCC
Q 043900 722 EWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPA 801 (953)
Q Consensus 722 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 801 (953)
+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~----------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-- 138 (237)
T cd05576 74 SHISKF----------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-- 138 (237)
T ss_pred HHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc--
Confidence 998521 2488999999999999999999998 9999999999999999999999999988655322
Q ss_pred cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCC
Q 043900 802 QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSD 881 (953)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 881 (953)
.....++..|+|||...+..++.++||||+|+++|||++|+.|+...... .......
T Consensus 139 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~----- 195 (237)
T cd05576 139 ---CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTL----- 195 (237)
T ss_pred ---cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------ccccccc-----
Confidence 12233567899999998888999999999999999999999887531110 0000000
Q ss_pred chhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHH
Q 043900 882 DEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNV 929 (953)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 929 (953)
..+...++.+.+++.+|++.||++||++.+.
T Consensus 196 -----------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 196 -----------------NIPEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred -----------------CCcccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 0001234568899999999999999997433
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=246.50 Aligned_cols=211 Identities=25% Similarity=0.320 Sum_probs=170.5
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc-chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCC
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL-HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 704 (953)
....+....+..||+|+||.|-+-++..++...|+|.++.. .....++..+|+.+..+. .+|.+|+++|.. ..
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-----~r 116 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-----FR 116 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh-----hc
Confidence 33445556677899999999999999999999999999743 344557778888876655 799999999973 34
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM 784 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 784 (953)
....+|.||.|+ .||..+-++.-. ....+++..+-+||..+++||.|||++ ..++|||+||+|||++.+|+
T Consensus 117 egdvwIcME~M~-tSldkfy~~v~~------~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~Gq 187 (282)
T KOG0984|consen 117 EGDVWICMELMD-TSLDKFYRKVLK------KGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQ 187 (282)
T ss_pred cccEEEeHHHhh-hhHHHHHHHHHh------cCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCc
Confidence 478999999994 588776643322 345788999999999999999999987 48999999999999999999
Q ss_pred EEEeccccceecCCCCCcccccccccccccccccccCC----CCCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 785 AHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG----SEVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
||+||||.+..+..+-.. +...|-..|||||.+.. ..|+-++||||+|+++.||.+++.||+.....
T Consensus 188 VKiCDFGIsG~L~dSiAk---t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 188 VKICDFGISGYLVDSIAK---TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred EEEcccccceeehhhhHH---HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 999999999877543222 22347789999998654 37899999999999999999999999864443
No 396
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=267.87 Aligned_cols=204 Identities=23% Similarity=0.308 Sum_probs=169.4
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeecc---chhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL---HHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQ 703 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 703 (953)
....+|....+||+|+||.|.+|..+++.+.+|||+++.. ..+..+--+.|-+++.-- +-|.++++..+ ++
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQ 420 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQ 420 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hh
Confidence 3445688999999999999999999999999999999732 222333445566666655 56778888776 44
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
.-+..|.||||+.||+|--.+++. +.+.+..+.-+|..||-||-+||++ ||+.||||.+|||+|.+|
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ~----------GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eG 487 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQV----------GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEG 487 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHHh----------cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCC
Confidence 458899999999999999888643 3566777888999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
.+||+|||+++.--.+ .......+||+.|+|||++...+|+.++|.|||||++|||+.|++||++.
T Consensus 488 HiKi~DFGmcKEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 488 HIKIADFGMCKENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred ceEeeecccccccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999853222 22334567999999999999999999999999999999999999999874
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=8.2e-31 Score=246.41 Aligned_cols=279 Identities=20% Similarity=0.279 Sum_probs=207.4
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCC
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 706 (953)
...++|++.+++|+|.|++||.|....+.+.++||++++.. .+...+|+.+++.+. ||||++++++..+. ...
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Sk 108 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESK 108 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---ccc
Confidence 35678999999999999999999998888899999997543 467889999999996 99999999996543 345
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC-CcE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE-MMA 785 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~ 785 (953)
.+.+|+||+.+.+...... .++..++.-.+.++++||.|+|++ ||.|||+||.|+++|.. -..
T Consensus 109 tpaLiFE~v~n~Dfk~ly~-------------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkL 172 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYP-------------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKL 172 (338)
T ss_pred CchhHhhhhccccHHHHhh-------------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhcee
Confidence 6789999999988877663 688889999999999999999999 99999999999999954 479
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARM 864 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 864 (953)
+|+|+|+|.++.++.. ....+.+..|.-||.+-.. .|+..-|+|||||++..|+..+.||-........+.+.+.-
T Consensus 173 rlIDWGLAEFYHp~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 173 RLIDWGLAEFYHPGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred eeeecchHhhcCCCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 9999999988754332 2334577889999987765 57888999999999999999999986544433344444433
Q ss_pred hCCchhhhhcccc---ccCCchhhhhcccchhhhhhhh-hH-HHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 865 ALPDHVVDIVDST---LLSDDEDLAVHGNQRQRQARIN-SK-IECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 865 ~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.-.+++...+++- +.+.+.++--...+..+..... +. .-..++..+++...+..|-.+||||+|.++
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 3333322222211 1222222111111111111111 11 112367889999999999999999999876
No 398
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=258.37 Aligned_cols=282 Identities=21% Similarity=0.253 Sum_probs=197.5
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeecc--chhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLL--HHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
+..+.||-|+||.||.+++..+++.||+|++... .-...+.+.+|++++..++|.|++..++.--....+--.+.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4457899999999999999999999999998532 23345788999999999999999998877422211112457889
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
+|.|. .+|...+- .+..++...+.-+.+||++||+|||+. +|.||||||.|.|++.+...||||||
T Consensus 136 TELmQ-SDLHKIIV----------SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIV----------SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHHH-hhhhheec----------cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccc
Confidence 99994 58888773 456789999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchh
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHV 870 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 870 (953)
+|+.-.. +.....+..+.|..|+|||+++|. .|+.+.||||.||++.|++.++..|..... ....+.....+....
T Consensus 202 LARvee~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdLLGTPs 278 (449)
T KOG0664|consen 202 LARTWDQ-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDLLGTPS 278 (449)
T ss_pred cccccch-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHHhCCCc
Confidence 9986543 333455666789999999999886 689999999999999999999988864221 111222222221111
Q ss_pred hhhccccccCCchhhhhcccchhhh----hhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 871 VDIVDSTLLSDDEDLAVHGNQRQRQ----ARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 871 ~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
.+.+...-.+...-. .++..+.+. ...........+-..+...++..||++|.+.++.+..+
T Consensus 279 ~EaMr~ACEGAk~H~-LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 279 QEAMKYACEGAKNHV-LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHHHHHhhhhHHHh-hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111110000000000 000000000 00111112223456778889999999999988877643
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.2e-29 Score=285.44 Aligned_cols=279 Identities=18% Similarity=0.199 Sum_probs=183.8
Q ss_pred hhcCCcccCcccccceeeEEEEEEc----------------CCCeEEEEEEeeccchhhHHHH--------------HHH
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILD----------------QGKTTVAVKVFNLLHHGAFKSF--------------IAE 678 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e 678 (953)
..++|++.++||+|+||.||+|.+. ..++.||||+++.......++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 2345799999875433333333 346
Q ss_pred HHHHhhcCCCCe-----eEEEeeecccc---cCCCCceeEEEeeccCCchhhccccCCcCC--------------cccCC
Q 043900 679 CNTLKNIRHRNL-----VKILTACSGVD---YQGNDFKALVFEFMQNRSLEEWLHPITRED--------------KTEEA 736 (953)
Q Consensus 679 ~~~l~~l~h~ni-----v~~~~~~~~~~---~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------------~~~~~ 736 (953)
+.++.+++|.++ ++++++|.... ....+..++||||+++++|.++++...... .....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766544 67777765321 112356899999999999999997432110 00011
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCccccccccccccccc
Q 043900 737 PRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIA 816 (953)
Q Consensus 737 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~a 816 (953)
...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 23467888999999999999999999 999999999999999999999999999976533211 11122335789999
Q ss_pred ccccCCCCC----------------------CcccchHHHHHHHHHHHhCCC-CCCCcccCCccHHHHHHhhCCchhhhh
Q 043900 817 PEYGLGSEV----------------------SINGDVYSYGILLLELVTRKK-PVDSMFEGDMNLHNFARMALPDHVVDI 873 (953)
Q Consensus 817 PE~~~~~~~----------------------~~~sDv~slG~vl~elltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (953)
||.+..... ..+.||||+||++|||++|.. ||............ .......+
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-----~~~~~~~~ 453 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-----YDNDLNRW 453 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh-----ccchHHHH
Confidence 998754321 134699999999999999875 66532111100000 00000000
Q ss_pred ccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCC---CCCCCHHHHHH
Q 043900 874 VDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESP---GDRMNMTNVVR 931 (953)
Q Consensus 874 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPt~~evl~ 931 (953)
. ..... ...+.......+...+++.+++..+| .+|+|++|+++
T Consensus 454 r--~~~~~-------------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 454 R--MYKGQ-------------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred H--hhccc-------------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0 00000 00011111335668899999999766 68999999875
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.7e-29 Score=265.88 Aligned_cols=239 Identities=28% Similarity=0.344 Sum_probs=189.9
Q ss_pred ceeeEEEEEEcCCCeEEEEEEeeccchhh-HHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccCCchh
Q 043900 643 SFGSVYKGILDQGKTTVAVKVFNLLHHGA-FKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLE 721 (953)
Q Consensus 643 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 721 (953)
+||.||+|+..++++.||+|++....... .+.+.+|++.+++++|++++++++++.. ....+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 58999999999877899999997554433 6789999999999999999999998643 36789999999999999
Q ss_pred hccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCC
Q 043900 722 EWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPA 801 (953)
Q Consensus 722 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 801 (953)
+++... ..+++..++.++.+++.+++|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 76 ~~~~~~----------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~- 141 (244)
T smart00220 76 DLLKKR----------GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG- 141 (244)
T ss_pred HHHHhc----------cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-
Confidence 998521 1278899999999999999999999 99999999999999999999999999998765432
Q ss_pred cccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCC
Q 043900 802 QTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSD 881 (953)
Q Consensus 802 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 881 (953)
......++..|+|||...+..++.++||||+|+++|++++|..||....... .............
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~------------ 206 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIGKPKPPF------------ 206 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHhccCCCC------------
Confidence 2234458889999999988889999999999999999999999986421111 0111000000000
Q ss_pred chhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 882 DEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
. ......+.++.+++.+|+..+|++||++.++++
T Consensus 207 ~----------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 207 P----------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred c----------------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0 000003456889999999999999999999986
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=251.44 Aligned_cols=201 Identities=24% Similarity=0.320 Sum_probs=173.2
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 705 (953)
.++|+..++||+|+|+.|..++.+.+.+.+|+|+++. ..++...-.+.|-.+..+. +||.+|-+..+ ++..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hccc
Confidence 3568899999999999999999999999999999973 3344455566777777766 69999999877 5566
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++|.||++||+|--++++ .+.+++..+.-+...|+-||.|||++ ||+.||+|.+|||+|..|.+
T Consensus 324 srlffvieyv~ggdlmfhmqr----------qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghi 390 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQR----------QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHI 390 (593)
T ss_pred ceEEEEEEEecCcceeeehhh----------hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCce
Confidence 889999999999999887752 34689999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
||+|||+++.--. ........+||+.|.|||++.|..|....|.||+||+++||+.|+.||+-
T Consensus 391 kltdygmcke~l~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 391 KLTDYGMCKEGLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred eecccchhhcCCC--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 9999999985322 22233456799999999999999999999999999999999999999984
No 402
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-31 Score=274.18 Aligned_cols=200 Identities=25% Similarity=0.350 Sum_probs=174.9
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec---cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL---LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
.++.++..||-|+||.|-++........+|+|+++. .+....+....|-.+|...+.|.||++|.. +.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchh
Confidence 345667789999999999999988776689998863 334456678889999999999999999987 667789
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
+|+.||-|-||.++..++. .+.++.....-++..+++|++|||++ +||.|||||+|.+++.+|-+||
T Consensus 495 vYmLmEaClGGElWTiLrd----------Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KL 561 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD----------RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKL 561 (732)
T ss_pred hhhhHHhhcCchhhhhhhh----------cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEE
Confidence 9999999999999999963 34577778888999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCc
Q 043900 788 SDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSM 851 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~ 851 (953)
.|||+|+.+..+ ......+||+.|.|||++.+...+.++|.||+|+++|||++|.+||.+.
T Consensus 562 VDFGFAKki~~g---~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 562 VDFGFAKKIGSG---RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred eehhhHHHhccC---CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999988643 3344567999999999999999999999999999999999999999863
No 403
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-30 Score=283.97 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=185.1
Q ss_pred ccCccccccee-eEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCceeEEE
Q 043900 635 SANEIGVGSFG-SVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 635 ~~~~ig~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
..+++|.|+.| .||+|...+ +.||||++-. +......+|+..++.- +|||||++++. ..+..+.||..
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~--R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIal 582 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEG--REVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIAL 582 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCC--ceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEe
Confidence 34568899987 579999965 5899999842 3345677899999888 69999999877 56678999999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC---C--CcEEE
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE---E--MMAHV 787 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kL 787 (953)
|.| ..+|.+++...... .. ...-...+.+..|+++||++||+. +||||||||.||||+. + .+++|
T Consensus 583 ELC-~~sL~dlie~~~~d-~~-----~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~i 652 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLD-VE-----MQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKI 652 (903)
T ss_pred hHh-hhhHHHHHhccccc-hh-----hcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEe
Confidence 999 55999999754111 00 111145578899999999999998 9999999999999975 3 48999
Q ss_pred eccccceecCCCCCc-ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhC-CCCCCCcccCCccHHHHHHhh
Q 043900 788 SDFGLARFLPLSPAQ-TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTR-KKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg-~~pf~~~~~~~~~~~~~~~~~ 865 (953)
+|||+++..+.+... .......||-+|+|||++....-+.++||||+|||+|+.++| .+||.+..+.+.++..-..
T Consensus 653 SDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~-- 730 (903)
T KOG1027|consen 653 SDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY-- 730 (903)
T ss_pred cccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc--
Confidence 999999988654332 233456699999999999999889999999999999999995 9999864443322211000
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.+..+ . ...++ +..++|.+|+.+||..||+|.+|+.
T Consensus 731 ---~L~~L-----~--------------------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 731 ---TLVHL-----E--------------------PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---ceeee-----c--------------------cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00000 0 00012 5779999999999999999999964
No 404
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=3.9e-29 Score=261.20 Aligned_cols=284 Identities=20% Similarity=0.205 Sum_probs=205.7
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC------CCCeeEEEeeeccc
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR------HRNLVKILTACSGV 700 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~ 700 (953)
+....+|.+....|+|-|++|.+|.+...+..||||+++... ...+.=.+|+++|+++. --|+++++..
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 345678999999999999999999998888899999997543 23455578999999994 3477777766
Q ss_pred ccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 701 DYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 701 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
|....+.|+|||-+ ..+|.++++..+.. ..+....+..++.|+.-||..|-.. +|+|.||||+||||+
T Consensus 503 -F~hknHLClVFE~L-slNLRevLKKyG~n-------vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPL-SLNLREVLKKYGRN-------VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVN 570 (752)
T ss_pred -hhhcceeEEEehhh-hchHHHHHHHhCcc-------cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEec
Confidence 44558999999988 56999999866543 4688899999999999999999998 999999999999998
Q ss_pred CCC-cEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 781 EEM-MAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 781 ~~~-~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
+.. .+||||||.|........ +.+..+..|+|||++.|-+|+...|+||.||+|||++||+..|++....++.-.
T Consensus 571 E~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl 646 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL 646 (752)
T ss_pred cCcceeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHH
Confidence 654 799999999987653322 223467789999999999999999999999999999999999987554433211
Q ss_pred HH-HHhhCCch-------hhhhccccccCCchh------------hhhccc---c----hhhhhhhhhHHHHHHHHHHHh
Q 043900 860 NF-ARMALPDH-------VVDIVDSTLLSDDED------------LAVHGN---Q----RQRQARINSKIECLVAMVRIG 912 (953)
Q Consensus 860 ~~-~~~~~~~~-------~~~~~~~~l~~~~~~------------~~~~~~---~----~~~~~~~~~~~~~~~~l~~l~ 912 (953)
.+ +...+|.. ...-+|..+.-.+.+ +..... . ...+.-.........++.+|+
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence 11 11111111 001111111000000 000000 0 000011223345667899999
Q ss_pred hccccCCCCCCCCHHHHHH
Q 043900 913 VACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 913 ~~cl~~dP~~RPt~~evl~ 931 (953)
..|+..||++|.|..|.++
T Consensus 727 dkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHHhccChhhcCCHHHHhc
Confidence 9999999999999998875
No 405
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.7e-28 Score=261.50 Aligned_cols=206 Identities=22% Similarity=0.312 Sum_probs=172.0
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
-|..++.||-|+||+|.+++-.++...||.|.++..+ .........|-+||..-+.+-||+++-. |++.+..
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdnL 704 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDNL 704 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCce
Confidence 3778899999999999999999998899999986432 3345567789999999999999999876 6778999
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
|+||+|++||++-.++-+ -+.+.+.-++-++.++..|+++.|.. |+|||||||+|||||.+|.+||+
T Consensus 705 YFVMdYIPGGDmMSLLIr----------mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLT 771 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIR----------MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLT 771 (1034)
T ss_pred EEEEeccCCccHHHHHHH----------hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeee
Confidence 999999999999998842 23677777888899999999999999 99999999999999999999999
Q ss_pred ccccceecCC---------CCCc--------------c-----------------cccccccccccccccccCCCCCCcc
Q 043900 789 DFGLARFLPL---------SPAQ--------------T-----------------SSIDAKGSIGYIAPEYGLGSEVSIN 828 (953)
Q Consensus 789 DfG~a~~~~~---------~~~~--------------~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~ 828 (953)
|||+++-+.. ++.. . ..-..+||+.|+|||++....|+..
T Consensus 772 DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~ 851 (1034)
T KOG0608|consen 772 DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL 851 (1034)
T ss_pred eccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc
Confidence 9999854311 1000 0 0011249999999999999999999
Q ss_pred cchHHHHHHHHHHHhCCCCCCCcccCC
Q 043900 829 GDVYSYGILLLELVTRKKPVDSMFEGD 855 (953)
Q Consensus 829 sDv~slG~vl~elltg~~pf~~~~~~~ 855 (953)
+|.||.|||||||+.|++||......+
T Consensus 852 cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 999999999999999999997654443
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2e-29 Score=271.52 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=202.7
Q ss_pred hcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.++|....++|.|.||.||+|++..+++..|+|+++....+...-.++|+-+++..+||||+.+++. +...+..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gs-----ylr~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGS-----YLRRDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhh-----hhhhcCcE
Confidence 4578899999999999999999999999999999998877788888999999999999999999988 44558899
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+.||||.+|+|++.-+ ....+++.++..+++...+|++|||+. |-+|||||-.||++++.|.+|++|
T Consensus 89 icMEycgggslQdiy~----------~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaD 155 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYH----------VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLAD 155 (829)
T ss_pred EEEEecCCCcccceee----------ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecc
Confidence 9999999999999875 345799999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcccccccccccccccccccC---CCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhC
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYGL---GSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMAL 866 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 866 (953)
||.+..+. ..........||+.|||||+.. .+.|...+||||.|++..|+-.-++|..+.... ..-+.-.
T Consensus 156 fgvsaqit--ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmT-- 228 (829)
T KOG0576|consen 156 FGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMT-- 228 (829)
T ss_pred cCchhhhh--hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhh--
Confidence 99997653 2333444567999999999853 456889999999999999998877774321111 1111000
Q ss_pred CchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 867 PDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 867 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
..-+++.-..+ ...-.+.+.++++.|+..+|++|||++.+++
T Consensus 229 ----kS~~qpp~lkD-------------------k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 229 ----KSGFQPPTLKD-------------------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ----ccCCCCCcccC-------------------CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 00001100000 0122445889999999999999999998764
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=8.7e-29 Score=262.06 Aligned_cols=207 Identities=23% Similarity=0.373 Sum_probs=173.6
Q ss_pred cCHHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhhcC---CCC
Q 043900 621 ISYQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--------HGAFKSFIAECNTLKNIR---HRN 689 (953)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---h~n 689 (953)
...+.......+|...+.+|+|+||.|+.|.++.....|+||.+.+.. +...-...-|+.+|..++ |+|
T Consensus 551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N 630 (772)
T KOG1152|consen 551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN 630 (772)
T ss_pred ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence 333334445567999999999999999999999998899999985321 111223557999999996 999
Q ss_pred eeEEEeeecccccCCCCceeEEEeec-cCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 043900 690 LVKILTACSGVDYQGNDFKALVFEFM-QNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPIT 768 (953)
Q Consensus 690 iv~~~~~~~~~~~~~~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 768 (953)
|++++++ |++++.+|++||-. ++.+|.+++. ....+++.++..|++||+.|+++||+. |||
T Consensus 631 IlKlLdf-----FEddd~yyl~te~hg~gIDLFd~IE----------~kp~m~E~eAk~IFkQV~agi~hlh~~---~iv 692 (772)
T KOG1152|consen 631 ILKLLDF-----FEDDDYYYLETEVHGEGIDLFDFIE----------FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIV 692 (772)
T ss_pred hhhhhhe-----eecCCeeEEEecCCCCCcchhhhhh----------ccCccchHHHHHHHHHHHhcccccccc---Cce
Confidence 9999999 56779999999986 4569999994 345789999999999999999999999 999
Q ss_pred eecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCC-cccchHHHHHHHHHHHhCCCC
Q 043900 769 HCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVS-INGDVYSYGILLLELVTRKKP 847 (953)
Q Consensus 769 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slG~vl~elltg~~p 847 (953)
|||||-+||.++.+|-+||+|||.|.....++ ....+||..|.|||++.|.+|- ..-||||+|+++|.++...-|
T Consensus 693 hrdikdenvivd~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 693 HRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred ecccccccEEEecCCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence 99999999999999999999999998764433 3345799999999999999875 568999999999999999999
Q ss_pred CC
Q 043900 848 VD 849 (953)
Q Consensus 848 f~ 849 (953)
|.
T Consensus 769 yy 770 (772)
T KOG1152|consen 769 YY 770 (772)
T ss_pred Cc
Confidence 86
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-28 Score=242.91 Aligned_cols=279 Identities=20% Similarity=0.230 Sum_probs=199.0
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeec--cchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccc-cCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNL--LHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVD-YQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~ 705 (953)
...+|.-.+.+|.|+- .|..|-+.-.++.||+|.... ......++..+|...+..+.|+|+++++.++.... ...-
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4567888889999998 788888887788999998742 22345677889999999999999999999864321 1112
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
.+.|+||||| ..+|.+.++ ..++-..+..|..|++.|++|||+. ||+||||||+||++..+..+
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~------------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~l 157 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVIL------------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTL 157 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHH------------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhhe
Confidence 4678999999 569998885 2466678899999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
||.|||+|+.-+. ....+..+.|..|+|||++.+..+.+.+||||.||++.||++|+..|.+. ..+.+|....
T Consensus 158 Ki~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~idQ~~ki~ 230 (369)
T KOG0665|consen 158 KILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHIDQWNKII 230 (369)
T ss_pred eeccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHHHHHHHH
Confidence 9999999985432 23556677999999999999999999999999999999999999988742 2222332211
Q ss_pred ----CCch-----hhhhccccccCCchh--hhhcccchhh--hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 866 ----LPDH-----VVDIVDSTLLSDDED--LAVHGNQRQR--QARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 866 ----~~~~-----~~~~~~~~l~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.++. +.+...-.....+.. .......+.. ....+...-......+++.+|+..||++|.+++++++
T Consensus 231 ~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 231 EQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0100 000000000000000 0000000000 0001111122345788999999999999999999876
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=4e-28 Score=250.37 Aligned_cols=282 Identities=23% Similarity=0.296 Sum_probs=203.3
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcC---CCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeeccccc
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQ---GKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDY 702 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 702 (953)
....+.|..+++||+|.|++||+|++.. ..+.||+|.+..... ..+..+|++.+..+ .+.||+++.++ +
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~-----~ 104 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGC-----F 104 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhh-----h
Confidence 3455678999999999999999999977 778999999975443 35688999999999 59999999988 6
Q ss_pred CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec-C
Q 043900 703 QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD-E 781 (953)
Q Consensus 703 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~ 781 (953)
..++.+++|+||++.....++.. .++..++..+++.+..||+++|+. |||||||||+|++.+ .
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~-------------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~ 168 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYR-------------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRR 168 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHh-------------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccc
Confidence 67799999999999988888884 578899999999999999999999 999999999999997 4
Q ss_pred CCcEEEeccccceecCCCC------------------------------------------Ccccccccccccccccccc
Q 043900 782 EMMAHVSDFGLARFLPLSP------------------------------------------AQTSSIDAKGSIGYIAPEY 819 (953)
Q Consensus 782 ~~~~kL~DfG~a~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE~ 819 (953)
.+.-.|+|||+|...+... .........||++|+|||+
T Consensus 169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence 5678999999997321100 0000012349999999999
Q ss_pred cCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhh---hccc--ccc-----------CCc
Q 043900 820 GLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVD---IVDS--TLL-----------SDD 882 (953)
Q Consensus 820 ~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~l~-----------~~~ 882 (953)
+... ..++++||||.||+++-+++++.||-....+-..+.+.+...-+..+.. ..+. .+. ..+
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f 328 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNF 328 (418)
T ss_pred HhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhch
Confidence 8765 5688999999999999999999999765554444444433221111111 0011 000 000
Q ss_pred hhh--hhcccchhh-hhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 883 EDL--AVHGNQRQR-QARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 883 ~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
... ..-...++. -.+.......+..+++++.+|+..||.+|.||+|.++
T Consensus 329 ~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 329 ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 000000000 0111111223447899999999999999999999986
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.1e-28 Score=233.54 Aligned_cols=256 Identities=18% Similarity=0.228 Sum_probs=191.8
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 707 (953)
..+.|.+.+.+|+|.||.+-+|+++.+++.+|+|.+... ....++|.+|...--.+ .|.||+.-+++. ++..+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~ 96 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDA 96 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCce
Confidence 345688999999999999999999999999999998643 33568899998876666 599999888763 566688
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec--CCCcE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD--EEMMA 785 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~ 785 (953)
+++++||++.|+|..-+. ...+.+....+++.|+++|+.|+|+. .+||||||.+||||- +..++
T Consensus 97 YvF~qE~aP~gdL~snv~-----------~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rv 162 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVE-----------AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRV 162 (378)
T ss_pred EEEeeccCccchhhhhcC-----------cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEE
Confidence 999999999999998884 23577888899999999999999999 999999999999993 33489
Q ss_pred EEeccccceecCCCCCcccccccccccccccccccCCC-----CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHH
Q 043900 786 HVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-----EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHN 860 (953)
Q Consensus 786 kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~ 860 (953)
||||||.++..+. ......-+..|.|||..... ...+.+|||.||+++|.++||..||......+..+..
T Consensus 163 KlcDFG~t~k~g~-----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 163 KLCDFGLTRKVGT-----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred EeeecccccccCc-----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 9999999985421 11222356679999974322 4568899999999999999999999865555555555
Q ss_pred HHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 861 FARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 861 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
|....-... ..+...+ ....+...++.++-+.++|++|--..++.++-
T Consensus 238 ~~~w~~rk~------~~~P~~F-------------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 238 WEQWLKRKN------PALPKKF-------------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HHHHhcccC------ccCchhh-------------------cccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 443221110 0111111 02234566788888899999995555555543
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-29 Score=256.79 Aligned_cols=424 Identities=23% Similarity=0.257 Sum_probs=244.8
Q ss_pred CCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccC-ccccc
Q 043900 12 TSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFY-NELVG 90 (953)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~-n~l~~ 90 (953)
++-++. .||..+- ..-..++|..|+|+.++|.+|..+++|+.||||+|+|+.+.|++|.++.+|.+|-+.+ |+|+.
T Consensus 54 r~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 54 RGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred cCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 333443 5555432 2458899999999998889999999999999999999989999999999988887766 99996
Q ss_pred cCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccc
Q 043900 91 KIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFN 170 (953)
Q Consensus 91 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 170 (953)
...+.|++|..|+.|.+.-|++.-...++|..|++|..|.+.+|.+..+.-.+|..+.+++.+.+..|.+- ...+
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCn 205 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCN 205 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccc
Confidence 66678999999999999999998777889999999999999999998444458999999999999998842 1122
Q ss_pred cccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceee
Q 043900 171 ISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFS 250 (953)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~ 250 (953)
++-+.. ++..|.+. +. +..-..-..+.++++..+.+..|..- ++.+ +..
T Consensus 206 L~wla~-~~a~~~ie------ts-garc~~p~rl~~~Ri~q~~a~kf~c~--~esl----------~s~----------- 254 (498)
T KOG4237|consen 206 LPWLAD-DLAMNPIE------TS-GARCVSPYRLYYKRINQEDARKFLCS--LESL----------PSR----------- 254 (498)
T ss_pred cchhhh-HHhhchhh------cc-cceecchHHHHHHHhcccchhhhhhh--HHhH----------HHh-----------
Confidence 222211 11122111 11 12222333344455543333333211 1111 000
Q ss_pred ecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEe
Q 043900 251 ITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEM 330 (953)
Q Consensus 251 l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 330 (953)
..+.+...+..|..-+.-.++|+.|+|++|+|+++-+.+|.++..++.|+|
T Consensus 255 -----------------------------~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 255 -----------------------------LSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred -----------------------------hccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 000111111222221222234555555555555555555555555555555
Q ss_pred ecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCc-eeeEEEccCCcCC------------------CCCCccCC
Q 043900 331 WNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNL-KVFNLDLSCNFLQ------------------GSIPSSLG 391 (953)
Q Consensus 331 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~l~~L~L~~N~l~------------------~~~p~~~~ 391 (953)
..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+ .+.+|+|-.|.+. |..|- +
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~C--q 383 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRC--Q 383 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCC--C
Confidence 5555554444455555555555555555555555555444 3444444444432 11111 1
Q ss_pred CCCCCcEEEcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccc-eeeecCCcccccCCCCccCCcccc
Q 043900 392 QYKTLTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLE-VLDVFENKLKGEIPSTLGSCKKLE 470 (953)
Q Consensus 392 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~ 470 (953)
.-..++.+.++++.+. .+.. +.... +. ..-++.-| ...+-+. +...|++.++ .+|..+. ..-.
T Consensus 384 ~p~~~~~~~~~dv~~~-~~~c---~~~ee---~~---~~~s~~cP---~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~t 447 (498)
T KOG4237|consen 384 SPGFVRQIPISDVAFG-DFRC---GGPEE---LG---CLTSSPCP---PPCTCLDTVVRCSNKLLK-LLPRGIP--VDVT 447 (498)
T ss_pred CCchhccccchhcccc-cccc---CCccc---cC---CCCCCCCC---CCcchhhhhHhhcccchh-hcCCCCC--chhH
Confidence 1123555555555443 1111 10000 00 00000111 1222232 2334455555 5665444 4567
Q ss_pred EEEccCccccCCCCccccCCCCCcEEECCCCcccccCCccccccccCceEeccCC
Q 043900 471 QLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNN 525 (953)
Q Consensus 471 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N 525 (953)
+|++.+|.++ .+|.+ .+.+| .+|+|+|+++..--..|.+|++|.+|-||+|
T Consensus 448 elyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 448 ELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred HHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 7888888888 67776 56677 8888888888666777888888888888876
No 412
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=2.5e-26 Score=236.11 Aligned_cols=211 Identities=28% Similarity=0.455 Sum_probs=180.7
Q ss_pred ccccceeeEEEEEEcCCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccC
Q 043900 639 IGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQN 717 (953)
Q Consensus 639 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 717 (953)
||+|++|.||++....+++.+++|++...... ..+.+.+|+..++.++|++++++++++. .....+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 68999999999999887789999999754432 3567899999999999999999999954 33778999999999
Q ss_pred CchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-CCcEEEeccccceec
Q 043900 718 RSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE-EMMAHVSDFGLARFL 796 (953)
Q Consensus 718 g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~ 796 (953)
++|.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+...
T Consensus 76 ~~l~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 76 GSLKDLLKENE---------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred CcHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 99999985321 2588999999999999999999999 9999999999999999 899999999999876
Q ss_pred CCCCCcccccccccccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcc
Q 043900 797 PLSPAQTSSIDAKGSIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVD 875 (953)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (953)
..... ......+...|++||..... .++.++|+|++|++++++
T Consensus 144 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 144 TSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred cCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 43321 12234478899999998877 888999999999999999
Q ss_pred ccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 876 STLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 876 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.++.+++.+|++.+|++||++.++++.
T Consensus 188 ------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 137789999999999999999999864
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=1.1e-25 Score=234.00 Aligned_cols=200 Identities=31% Similarity=0.422 Sum_probs=171.0
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchh-hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEE
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
|++.+.||+|++|.||+|...++++.||+|.+...... ..+.+.+|++.+++++|+|++++++++. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 56778999999999999999987789999999765544 5678899999999999999999999854 33678999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
+||+++++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||
T Consensus 76 ~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g 143 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG---------KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFG 143 (225)
T ss_pred EeccCCCCHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCc
Confidence 999999999999863221 178899999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccccccccc-CCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYG-LGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
.+........ .......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 144 ~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 144 LARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 9987754321 122334578889999998 667788899999999999999999999964
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-28 Score=249.35 Aligned_cols=229 Identities=21% Similarity=0.201 Sum_probs=172.5
Q ss_pred CcEEEEEeCCCeeeeecCc-cccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCC-CccccccCcCccCCCCCcEE
Q 043900 4 QRVKILNLTSLKLAGSISP-HVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNN-NSIGGEIPANISSCSNLIQI 81 (953)
Q Consensus 4 ~~~~~l~l~~~~~~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~p~~~~~l~~L~~L 81 (953)
...+.++|..|+|. .||+ +|+.++.|++||||+|+|+.+-|.+|.++..|.+|-+-+ |+|+..--+.|.+|..|+.|
T Consensus 67 ~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 67 PETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 34688999999998 7776 899999999999999999999999999999988877666 99995555779999999999
Q ss_pred eccCccccccCCcccCCccccceeeccccccccccCC-cccCCCcccEEecccccc------------cccCCccccccc
Q 043900 82 RLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPS-SLGNLSSINTLFLTDNNL------------DGGIPDTFGWLK 148 (953)
Q Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~L~~L~~L~L~~N~l------------~~~~~~~~~~l~ 148 (953)
.+.-|++.-+..+.|..|++|..|.+.+|.+. .+++ +|..+.+++.+.+..|.+ ....|-.+++..
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgar 224 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGAR 224 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccce
Confidence 99999999888899999999999999999999 5555 999999999999999982 234455666766
Q ss_pred cccceecccccccCCCCCcccc-cccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEE
Q 043900 149 NLATLAMAENWLSGTIPSSIFN-ISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQ 227 (953)
Q Consensus 149 ~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 227 (953)
-..-..+.++++...-+..+.- +.++..=-.+.+...+..|..-|.+|++|+.|+|++|+|+.+.+.+|.++..+++|.
T Consensus 225 c~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~ 304 (498)
T KOG4237|consen 225 CVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELY 304 (498)
T ss_pred ecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhh
Confidence 6666677777776443333321 112221112223334455655555666666666666666666666666666666666
Q ss_pred ccccccc
Q 043900 228 ADVNKLT 234 (953)
Q Consensus 228 L~~N~l~ 234 (953)
|..|+|.
T Consensus 305 L~~N~l~ 311 (498)
T KOG4237|consen 305 LTRNKLE 311 (498)
T ss_pred cCcchHH
Confidence 6666654
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=9.3e-24 Score=266.06 Aligned_cols=320 Identities=21% Similarity=0.308 Sum_probs=192.2
Q ss_pred ccccCCccCceeecCCCc------cCcCCCccCCCCC-CCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCc
Q 043900 22 PHVGNLSFLKVLLLYNNS------FNHGIPSEFDRLQ-RLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPS 94 (953)
Q Consensus 22 ~~~~~l~~L~~L~L~~n~------l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (953)
..|.++++|+.|.+.++. +...+|..|..++ +|+.|++.+|.++ .+|..| ...+|+.|+|.+|++. .++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 357777777777776553 2333566666653 5777777777776 667666 4577777777777776 5666
Q ss_pred ccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccc
Q 043900 95 ELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSI 174 (953)
Q Consensus 95 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 174 (953)
.+..+++|++|+|++|.....+| .++.+++|++|+|++|.....+|..+..+++|+.|++++|.....+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 67777777777777665333555 46677777777777766545667777777777777777654333556544 56666
Q ss_pred eEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeeccc
Q 043900 175 TAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITEN 254 (953)
Q Consensus 175 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n 254 (953)
+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|++..+.......
T Consensus 707 ~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~---------------- 764 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWE---------------- 764 (1153)
T ss_pred CEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccc----------------
Confidence 66666666544344421 245555555555554 333332 34444444444322111000
Q ss_pred ccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCc
Q 043900 255 SLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNR 334 (953)
Q Consensus 255 ~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 334 (953)
.+. .++......+++|+.|++++|...+.+|..++++++|+.|++++|.
T Consensus 765 ------------------------------~~~-~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 765 ------------------------------RVQ-PLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred ------------------------------ccc-ccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 000 0111122233578888888887776788888888888888888875
Q ss_pred ccccCCcCccCCCCCCeEEeccccccCCCCCCCCCceeeEEEccCCcCCCCCCccCCCCCCCcEEEcCC
Q 043900 335 LSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSD 403 (953)
Q Consensus 335 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 403 (953)
.-+.+|..+ .+++|+.|+|++|.....+|.... .++.|+|++|.++ .+|.++..+++|+.|+|++
T Consensus 814 ~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~--nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 814 NLETLPTGI-NLESLESLDLSGCSRLRTFPDIST--NISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CcCeeCCCC-CccccCEEECCCCCcccccccccc--ccCEeECCCCCCc-cChHHHhcCCCCCEEECCC
Confidence 444566655 678888888888765444443322 2344555555555 3455555555555555554
No 416
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=2.5e-24 Score=214.10 Aligned_cols=169 Identities=21% Similarity=0.220 Sum_probs=126.6
Q ss_pred CchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 718 RSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 718 g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
|+|.++++.. ...+++.+++.|+.|++.||+|||+. + ||+||+++.++.+|+ ||.++...
T Consensus 1 GsL~~~l~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~ 60 (176)
T smart00750 1 VSLADILEVR---------GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKT 60 (176)
T ss_pred CcHHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeec
Confidence 6788888532 23589999999999999999999998 5 999999999999999 99998764
Q ss_pred CCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhcccc
Q 043900 798 LSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDST 877 (953)
Q Consensus 798 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (953)
... ..||+.|+|||++.+..++.++|||||||++|||+||+.||..................+..
T Consensus 61 ~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 125 (176)
T smart00750 61 PEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD-------- 125 (176)
T ss_pred ccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC--------
Confidence 321 25889999999999999999999999999999999999998653222111111111110000
Q ss_pred ccCCchhhhhcccchhhhhhhhhHHHHH--HHHHHHhhccccCCCCCCCCHHHHHHHHHHHHH
Q 043900 878 LLSDDEDLAVHGNQRQRQARINSKIECL--VAMVRIGVACSMESPGDRMNMTNVVRQLQSIKN 938 (953)
Q Consensus 878 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 938 (953)
.. .+ ....... .++.+++.+||+.||++||++.|+++.+..+..
T Consensus 126 ----~~------------~~-~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 126 ----PR------------DR-SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ----cc------------cc-ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 00 00 0011222 368999999999999999999999999877654
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.7e-23 Score=263.65 Aligned_cols=160 Identities=18% Similarity=0.237 Sum_probs=98.2
Q ss_pred CCccCCCCCCCcEEeCCCCc------cccccCcCccCCC-CCcEEeccCccccccCCcccCCccccceeecccccccccc
Q 043900 44 IPSEFDRLQRLQVLALNNNS------IGGEIPANISSCS-NLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSI 116 (953)
Q Consensus 44 ~~~~~~~l~~L~~L~L~~n~------i~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 116 (953)
.+.+|.++.+|+.|.+..+. +...+|..|..++ +|+.|.+.+|.+. .+|..| ...+|++|++++|++. .+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cc
Confidence 44567777777777775543 2234566665553 5777777777766 566665 4567777777777776 56
Q ss_pred CCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCccccccccccccccc
Q 043900 117 PSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTL 196 (953)
Q Consensus 117 p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l 196 (953)
+..+..+++|++|+|++|.....+|+ ++.+++|++|+|++|.....+|..+.++.+|+.|++++|.....+|..+ .+
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l 703 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NL 703 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CC
Confidence 66666777777777776553334553 6666777777777665444666666666666666666654333445433 35
Q ss_pred ccccEEEeeCccc
Q 043900 197 QNLQFFSVFENQL 209 (953)
Q Consensus 197 ~~L~~L~L~~N~l 209 (953)
++|+.|++++|..
T Consensus 704 ~sL~~L~Lsgc~~ 716 (1153)
T PLN03210 704 KSLYRLNLSGCSR 716 (1153)
T ss_pred CCCCEEeCCCCCC
Confidence 5555555555543
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=1.5e-24 Score=265.54 Aligned_cols=201 Identities=18% Similarity=0.244 Sum_probs=138.6
Q ss_pred hcCC-CCeeEEEeeecccc--cCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHh
Q 043900 684 NIRH-RNLVKILTACSGVD--YQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLH 760 (953)
Q Consensus 684 ~l~h-~niv~~~~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 760 (953)
.++| +||++++++|.... ....+..+.+|||+ +++|.+++... ...+++.+++.++.||++||+|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---------~~~~~~~~~~~i~~qi~~al~~lH 97 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---------DRSVDAFECFHVFRQIVEIVNAAH 97 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---------cccccHHHHHHHHHHHHHHHHHHH
Confidence 3445 57888888763321 12234577888988 66999999522 235899999999999999999999
Q ss_pred hCCCCCeEeecCCCCCeEecC-------------------CCcEEEeccccceecCCCCC--------------cccccc
Q 043900 761 HDCQPPITHCDLKPSNVLLDE-------------------EMMAHVSDFGLARFLPLSPA--------------QTSSID 807 (953)
Q Consensus 761 ~~~~~~ivH~Dlkp~NIll~~-------------------~~~~kL~DfG~a~~~~~~~~--------------~~~~~~ 807 (953)
++ ||+||||||+|||++. ++.+|++|||+++....... ......
T Consensus 98 ~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (793)
T PLN00181 98 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL 174 (793)
T ss_pred hC---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence 99 9999999999999954 34566666666653211000 000112
Q ss_pred cccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhh
Q 043900 808 AKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAV 887 (953)
Q Consensus 808 ~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 887 (953)
..||+.|||||++.+..++.++|||||||++|||++|..|+.... ...........+..
T Consensus 175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~~~------------------ 233 (793)
T PLN00181 175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLPPQ------------------ 233 (793)
T ss_pred cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcChh------------------
Confidence 357889999999999999999999999999999999888764210 00000000000000
Q ss_pred cccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 888 HGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.....++..+++.+||+++|.+||+|.|+++
T Consensus 234 -------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 234 -------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred -------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 0011223457888999999999999999976
No 419
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1e-24 Score=210.35 Aligned_cols=247 Identities=22% Similarity=0.348 Sum_probs=187.0
Q ss_pred ccCcccccceeeEEEEEEcCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEE
Q 043900 635 SANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
...+|.+...|+.|+|++.++. +++|+++... ....++|..|.-.++.+.||||.++++.|..+ ....++.
T Consensus 194 l~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~is 266 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVIIS 266 (448)
T ss_pred hhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEee
Confidence 3457899999999999998764 7888886432 33346789999999999999999999998654 6789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe--cc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS--DF 790 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~--Df 790 (953)
.||+.|+|+..++.... ...+..++.++|.++|+|++|||+. .+-|.--.+.+..|++|++.+++|+ |-
T Consensus 267 q~mp~gslynvlhe~t~--------vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTS--------VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred eeccchHHHHHHhcCcc--------EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccc
Confidence 99999999999985443 3567788999999999999999997 3345555789999999999988874 33
Q ss_pred ccceecCCCCCcccccccccccccccccccCCCCCC---cccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCC
Q 043900 791 GLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVS---INGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALP 867 (953)
Q Consensus 791 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 867 (953)
-++.. .....-.+.||+||.++..+-+ .++|+|||++++||+.|+..||.+....+..+.-..
T Consensus 338 kfsfq---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial----- 403 (448)
T KOG0195|consen 338 KFSFQ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL----- 403 (448)
T ss_pred eeeee---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----
Confidence 22221 1122346899999998876543 678999999999999999999986443322111000
Q ss_pred chhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 868 DHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 868 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
+ + .|...++..+..+.++|.-|...||.+||.++.|+-.|+++.
T Consensus 404 ----e----------------g------lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 ----E----------------G------LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ----c----------------c------ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0 0 011111234456889999999999999999999999998763
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.2e-23 Score=224.89 Aligned_cols=168 Identities=23% Similarity=0.133 Sum_probs=131.4
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcC-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhhcCCCCeeE-EEeeecc
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQ-GKTTVAVKVFNLL-----HHGAFKSFIAECNTLKNIRHRNLVK-ILTACSG 699 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~ 699 (953)
....++|.+.+.||+|+||+||+|.+.. +++.||||+.... .......+.+|++++++++|+++++ ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3456789999999999999999999875 5667899987522 2234567899999999999999985 4432
Q ss_pred cccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecC-CCCCeE
Q 043900 700 VDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDL-KPSNVL 778 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIl 778 (953)
+..++||||++|++|.... . .. ...++.|+++||+|||+. ||+|||| ||+|||
T Consensus 91 ------~~~~LVmE~~~G~~L~~~~----~----------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NIL 144 (365)
T PRK09188 91 ------GKDGLVRGWTEGVPLHLAR----P----------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWL 144 (365)
T ss_pred ------CCcEEEEEccCCCCHHHhC----c----------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEE
Confidence 3479999999999996321 0 00 146788999999999999 9999999 999999
Q ss_pred ecCCCcEEEeccccceecCCCCCccc------ccccccccccccccccCCC
Q 043900 779 LDEEMMAHVSDFGLARFLPLSPAQTS------SIDAKGSIGYIAPEYGLGS 823 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 823 (953)
++.++.+||+|||+|+.+........ .....+++.|+|||.+...
T Consensus 145 v~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 145 MGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999999999998754432221 1345588899999987654
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.4e-23 Score=244.20 Aligned_cols=258 Identities=25% Similarity=0.375 Sum_probs=128.6
Q ss_pred CceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccc
Q 043900 30 LKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSV 109 (953)
Q Consensus 30 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (953)
-..|+|++|+++. +|..+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 3445555555554 444443 24555555555555 34431 345555555555555 33432 23555556666
Q ss_pred cccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccccccc
Q 043900 110 NNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIP 189 (953)
Q Consensus 110 N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 189 (953)
|+++ .+|..+ ++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. ..+|+.|++++|+|+ .+|
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~-~Lp~l---p~~L~~L~Ls~N~L~-~LP 338 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLA-SLPAL---PSELCKLWAYNNQLT-SLP 338 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-cccc---cccccceeECCCCccc-cCCCC---cccccccccccCccc-ccc
Confidence 6555 334322 34555566666655 3333 2345666666666665 33331 124555566666665 233
Q ss_pred cccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCccccccc
Q 043900 190 LDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLCS 269 (953)
Q Consensus 190 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~ 269 (953)
. + ..+|+.|+|++|+|+. +|... .+|+.|++++|+++..+.. +.
T Consensus 339 ~-l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~LP~l---~~------------------------- 382 (788)
T PRK15387 339 T-L---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTSLPAL---PS------------------------- 382 (788)
T ss_pred c-c---ccccceEecCCCccCC-CCCCC---cccceehhhccccccCccc---cc-------------------------
Confidence 2 1 1356666666666663 33322 3455566666666543211 01
Q ss_pred ccccccccEEeccCCcccccCChhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCCC
Q 043900 270 LTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQNL 349 (953)
Q Consensus 270 l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 349 (953)
.|+.|++++|.+.+ +|.. +++|+.|++++|++++ +|.. ..+|+.|++++|+|+ .+|..|+.+++|
T Consensus 383 -----~L~~LdLs~N~Lt~-LP~l----~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L 447 (788)
T PRK15387 383 -----GLKELIVSGNRLTS-LPVL----PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSE 447 (788)
T ss_pred -----ccceEEecCCcccC-CCCc----ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCC
Confidence 12223333333322 2211 1356666666666663 3432 234566666666666 456666666666
Q ss_pred CeEEeccccccCC
Q 043900 350 RELRLQRNKFLGN 362 (953)
Q Consensus 350 ~~L~L~~N~l~~~ 362 (953)
+.|+|++|+|++.
T Consensus 448 ~~LdLs~N~Ls~~ 460 (788)
T PRK15387 448 TTVNLEGNPLSER 460 (788)
T ss_pred CeEECCCCCCCch
Confidence 6666666666643
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2e-23 Score=242.83 Aligned_cols=262 Identities=25% Similarity=0.342 Sum_probs=150.5
Q ss_pred CCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEec
Q 043900 52 QRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFL 131 (953)
Q Consensus 52 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 131 (953)
..-..|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 34567888888887 6777665 36788888888877 45542 467777778777777 45543 356777777
Q ss_pred ccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccccccccccccccccccEEEeeCccccC
Q 043900 132 TDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTG 211 (953)
Q Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (953)
++|.++ .+|..+ ++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++ +|.. ..+|+.|++++|+|+.
T Consensus 270 s~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l----p~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 270 FSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL----PSELCKLWAYNNQLTS 336 (788)
T ss_pred cCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCC----cccccccccccCcccc
Confidence 777776 444422 45666777777776 45542 3456666666666663 3321 1245555566666552
Q ss_pred CCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccCCCCCCcccccccccccccccEEeccCCcccccCC
Q 043900 212 AIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLP 291 (953)
Q Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p 291 (953)
+|.. ..+|+.|++++|+|+..++
T Consensus 337 -LP~l---p~~Lq~LdLS~N~Ls~LP~----------------------------------------------------- 359 (788)
T PRK15387 337 -LPTL---PSGLQELSVSDNQLASLPT----------------------------------------------------- 359 (788)
T ss_pred -cccc---ccccceEecCCCccCCCCC-----------------------------------------------------
Confidence 3321 1245555555555543221
Q ss_pred hhhhhccccCcEEEcccCcccccCCccccCCCCCCEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCce
Q 043900 292 ACISNLSTTLEMLLLDNNKIFGNIPAAIGKFVNLQRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNLK 371 (953)
Q Consensus 292 ~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 371 (953)
.+.+|+.|++++|+|.. +|.. ..+|+.|+|++|.|++ +|.. .++|+.|++++|+|++ +|..+. .
T Consensus 360 -----lp~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~~--~ 423 (788)
T PRK15387 360 -----LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLPS--G 423 (788)
T ss_pred -----CCcccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcchh--h
Confidence 11345555666666653 3332 2356666666666663 3432 2456666776666663 443322 2
Q ss_pred eeEEEccCCcCCCCCCccCCCCCCCcEEEcCCCccCCCCC
Q 043900 372 VFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSDNNLTGTIP 411 (953)
Q Consensus 372 l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 411 (953)
+..|++++|+|+ .+|..++++++|+.|+|++|+|++..|
T Consensus 424 L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 424 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred hhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 344555555555 456666666666666666666665433
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4.7e-22 Score=216.79 Aligned_cols=265 Identities=22% Similarity=0.222 Sum_probs=197.2
Q ss_pred CCcccCcccccceeeEEEEEEcCCC-eEEEEEEeeccchhhHHHHHHHHHHHhhcC----CCCeeEEEeeecccccCCCC
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGK-TTVAVKVFNLLHHGAFKSFIAECNTLKNIR----HRNLVKILTACSGVDYQGND 706 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~ 706 (953)
+|.+.+.||+|+||.||.|.+..++ +.+|+|............+..|..++..+. .+++..+++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999997764 578899886543333336778888888886 368888888732 3456
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC----
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE---- 782 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---- 782 (953)
..++||+.+ |.+|.++..... .+.++..++..|+.|++.+|+++|+. |++||||||+|+++...
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~--------~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~ 162 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP--------PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSE 162 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC--------CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcc
Confidence 789999988 889999775332 24799999999999999999999999 99999999999999754
Q ss_pred -CcEEEeccccceecC--CCCC----cc-c-ccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCccc
Q 043900 783 -MMAHVSDFGLARFLP--LSPA----QT-S-SIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFE 853 (953)
Q Consensus 783 -~~~kL~DfG~a~~~~--~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~ 853 (953)
..+.|.|||+|+.+. .... .. . .....||..|+++.+..+...+.+.|+||++.++.|+..|..||.....
T Consensus 163 ~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 163 VRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred cceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 469999999998332 1111 11 1 2235599999999999999999999999999999999999999965332
Q ss_pred CCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 854 GDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
... ............... .....+.++.+++..+-..+..++|....+...+
T Consensus 243 ~~~-~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 243 TDL-KSKFEKDPRKLLTDR---------------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred cch-HHHHHHHhhhhcccc---------------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 211 111111100000000 0001234566666667678999999999999998
Q ss_pred HHHHHHh
Q 043900 934 QSIKNIL 940 (953)
Q Consensus 934 ~~i~~~~ 940 (953)
+......
T Consensus 295 ~~~~~~~ 301 (322)
T KOG1164|consen 295 KDVFDSE 301 (322)
T ss_pred HHHHHhc
Confidence 8876653
No 424
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=5.7e-22 Score=197.44 Aligned_cols=266 Identities=17% Similarity=0.210 Sum_probs=201.2
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCCCCcee
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
-.|+++++||+|+||.+|.|+.--++++||||.-...+ ...++..|....+.+ ..+.|..++-| .+.+.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee-----ccccchhh
Confidence 36999999999999999999998888999999865333 235677788888888 57888888766 44556778
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-----c
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-----M 784 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~ 784 (953)
+|+|.+ |.+|.++..-+. +.++..++..+|.|++.-++|+|++ .+|.|||||+|+||...+ .
T Consensus 101 LVidLL-GPSLEDLFD~Cg---------R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCG---------RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred hhhhhh-CcCHHHHHHHhc---------CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCce
Confidence 999998 778888885443 3699999999999999999999999 999999999999996443 6
Q ss_pred EEEeccccceecCCCCCcc-----cccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 785 AHVSDFGLARFLPLSPAQT-----SSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
+.++|||+|+.+....+.. ......||.+||+-....|.+.+.+.|+=|+|-|+...+-|..||.+.... ....
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~ 246 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKE 246 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHH
Confidence 8999999999885443221 112344999999999999999999999999999999999999999874322 1111
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
++.. +-+..-... ..+-....|.++...+...-..+-.+-|..+-+...+.++.+.
T Consensus 247 kYeK---------IGe~Kr~T~---------------i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 247 KYEK---------IGETKRSTP---------------IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HHHH---------hccccccCC---------------HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 1111 111000000 0011123456677777777778888999999888888887766
Q ss_pred hc
Q 043900 940 LL 941 (953)
Q Consensus 940 ~~ 941 (953)
..
T Consensus 303 ~g 304 (449)
T KOG1165|consen 303 LG 304 (449)
T ss_pred cC
Confidence 44
No 425
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.9e-22 Score=190.63 Aligned_cols=263 Identities=18% Similarity=0.250 Sum_probs=195.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCC-CCeeEEEeeecccccCCCCc
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRH-RNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 707 (953)
....|+++++||.|+||.+|.|.....++.||+|+-+... ....+..|..+.+.+++ ..|..+..+ ..+..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhh-----cccccc
Confidence 4567999999999999999999999999999999975332 23456778888888864 555555555 344567
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec---CCCc
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD---EEMM 784 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~ 784 (953)
-.+||+.. |.+|.+.+.-+.+ .++..+++-+|-|++.-++|+|.+ +++||||||+|+|+. ....
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R---------~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~k 152 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR---------RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNK 152 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh---------hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccce
Confidence 78999998 8899998865543 589999999999999999999999 999999999999995 3347
Q ss_pred EEEeccccceecCCCCCc-----ccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccC--Ccc
Q 043900 785 AHVSDFGLARFLPLSPAQ-----TSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEG--DMN 857 (953)
Q Consensus 785 ~kL~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~--~~~ 857 (953)
+.++|||+|+.+....+. .......||.+|.+-....+...+.+.|+-|+|.++..+--|..||.+.... ...
T Consensus 153 l~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK 232 (341)
T KOG1163|consen 153 LYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK 232 (341)
T ss_pred EEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH
Confidence 999999999877533221 2223455999999988888888899999999999999999999999875433 222
Q ss_pred HHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 858 LHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
+...........+..+. ...|.++.-.+..|-..--++-|...-+.+.+..+.
T Consensus 233 yEkI~EkK~s~~ie~LC---------------------------~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 233 YEKISEKKMSTPIEVLC---------------------------KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred HHHHHHhhcCCCHHHHh---------------------------CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 22222222222111111 023445666777777777777787777777666554
Q ss_pred H
Q 043900 938 N 938 (953)
Q Consensus 938 ~ 938 (953)
.
T Consensus 286 r 286 (341)
T KOG1163|consen 286 R 286 (341)
T ss_pred h
Confidence 3
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=8.1e-23 Score=235.65 Aligned_cols=255 Identities=20% Similarity=0.215 Sum_probs=189.8
Q ss_pred ccCcccccceeeEEEEEEcCCCeEEEEEEeec----cc--hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 635 SANEIGVGSFGSVYKGILDQGKTTVAVKVFNL----LH--HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~----~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
..+.+|.|++|.|+.+......+.++.|.++. .. ......+..|+.+-..++|||++..+..+... ...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DGI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----ccc
Confidence 45789999999999888876665666665531 11 11122366788888888999998887764332 333
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
.-+|||+++ +|..++... ..++..++..++.|+..|++|+|+. |+.|||+|++|++++.+|.+||+
T Consensus 397 ~~~mE~~~~-Dlf~~~~~~----------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMSN----------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred hhhhhcccH-HHHHHHhcc----------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEe
Confidence 334999999 999999522 3578889999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCc--ccccccccccccccccccCCCCCCcc-cchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhh
Q 043900 789 DFGLARFLPLSPAQ--TSSIDAKGSIGYIAPEYGLGSEVSIN-GDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMA 865 (953)
Q Consensus 789 DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 865 (953)
|||.+..+...... ......+|+..|+|||++.+..|.+. .||||.|+++..|.+|+.||......+..+.. ..
T Consensus 463 Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~ 539 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NN 539 (601)
T ss_pred ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hc
Confidence 99999876544333 55667789999999999999999866 79999999999999999999765444332200 00
Q ss_pred CCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 866 LPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 866 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
...+ .........-....+.+...++.+|+++||.+|.|+++|++.
T Consensus 540 ~~~~---------------------~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 540 YSDQ---------------------RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccc---------------------cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000 000000111223556778899999999999999999999863
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1e-21 Score=230.68 Aligned_cols=118 Identities=26% Similarity=0.505 Sum_probs=60.9
Q ss_pred CCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecc
Q 043900 77 NLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMA 156 (953)
Q Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (953)
+...|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 3455555555555 3444433 34555666666655 3444333 35666666666665 3444332 356666666
Q ss_pred cccccCCCCCcccccccceEEecCCcccccccccccccccccccEEEeeCcccc
Q 043900 157 ENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLT 210 (953)
Q Consensus 157 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (953)
+|+++ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+|+
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP---EELRYLSVYDNSIR 296 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC---CCCcEEECCCCccc
Confidence 66665 4555443 35666666666666 3443322 23444444444443
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.3e-21 Score=229.72 Aligned_cols=180 Identities=24% Similarity=0.460 Sum_probs=88.0
Q ss_pred EEEEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccC
Q 043900 6 VKILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFY 85 (953)
Q Consensus 6 ~~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 85 (953)
.+.|+++++++. .+|..+. ++|+.|+|++|+|+. +|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 445555555554 4555442 345556666665554 343332 35555666666555 4454432 2455555555
Q ss_pred ccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCC
Q 043900 86 NELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIP 165 (953)
Q Consensus 86 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 165 (953)
|.+. .+|..+. ++|+.|++++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|++++|+++ .+|
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt-~LP 320 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT-ALP 320 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc-cCC
Confidence 5555 4444443 34555555555555 3444433 35555555555555 2333222 24555555555555 334
Q ss_pred CcccccccceEEecCCcccccccccccccccccccEEEeeCcccc
Q 043900 166 SSIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLT 210 (953)
Q Consensus 166 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (953)
..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+
T Consensus 321 ~~l~--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 321 ETLP--PGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT 359 (754)
T ss_pred cccc--ccceeccccCCccc-cCChhhc---CcccEEECCCCCCC
Confidence 3322 34555555555554 2333221 34444444444444
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=7.3e-21 Score=190.11 Aligned_cols=183 Identities=13% Similarity=0.146 Sum_probs=136.9
Q ss_pred HHHHHH--hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHH---H------HHHHHHHHhhcCCCCee
Q 043900 623 YQNLYN--ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFK---S------FIAECNTLKNIRHRNLV 691 (953)
Q Consensus 623 ~~~~~~--~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~e~~~l~~l~h~niv 691 (953)
|.++.. ...+|++.+.+|.|+||.||.+... ...+|+|+++........ . +.+|+..+.++.||+|.
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~~--~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~ 98 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDTD--YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLA 98 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEecC--CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCC
Confidence 444433 4678999999999999999997663 347999999743322222 2 67999999999999999
Q ss_pred EEEeeeccccc---CCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 043900 692 KILTACSGVDY---QGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPIT 768 (953)
Q Consensus 692 ~~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 768 (953)
.+.+++..... ......++||||++|.+|.++.. ++. ....+++.++..+|+. |++
T Consensus 99 ~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------------~~~----~~~~~i~~~l~~lH~~---gi~ 157 (232)
T PRK10359 99 SLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------------ISE----DVKAKIKASIESLHQH---GMV 157 (232)
T ss_pred cceEeeeecccccccccCCeEEEEEEECCccHHHhhh--------------ccH----HHHHHHHHHHHHHHHc---CCc
Confidence 99888543211 12356899999999999988741 222 2456999999999999 999
Q ss_pred eecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh
Q 043900 769 HCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT 843 (953)
Q Consensus 769 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt 843 (953)
|||+||+||++++++ ++++|||........... ..+.....+..++|+||||+++..+..
T Consensus 158 H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 158 SGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred cCCCChHHEEEeCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 999999999999988 999999988754321111 013344556789999999999877653
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=2e-19 Score=199.90 Aligned_cols=260 Identities=28% Similarity=0.389 Sum_probs=193.6
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchh---hHHHHHHHHHHHhhcCCC-CeeEEEeeecccccCCCCce
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG---AFKSFIAECNTLKNIRHR-NLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 708 (953)
|...+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+..++.+.|+ +++++.+++. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 677889999999999999998 57999998643322 467889999999999888 7999999862 23447
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC-cEEE
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM-MAHV 787 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL 787 (953)
+++++|+.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .+++
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l 143 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK-------GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKL 143 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEE
Confidence 9999999999999776432210 3588899999999999999999999 999999999999999988 7999
Q ss_pred eccccceecCCCCCcc----cccccccccccccccccCC---CCCCcccchHHHHHHHHHHHhCCCCCCCcccC--CccH
Q 043900 788 SDFGLARFLPLSPAQT----SSIDAKGSIGYIAPEYGLG---SEVSINGDVYSYGILLLELVTRKKPVDSMFEG--DMNL 858 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~slG~vl~elltg~~pf~~~~~~--~~~~ 858 (953)
+|||.++......... ......|+..|+|||...+ ..++...|+||+|++++++++|..||...... ....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (384)
T COG0515 144 IDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQT 223 (384)
T ss_pred eccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHH
Confidence 9999998664433221 2355679999999999888 57889999999999999999999997643221 0111
Q ss_pred HHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHH
Q 043900 859 HNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQ 932 (953)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 932 (953)
.......... ....... .... ......+.+++..|+..+|..|.++.+....
T Consensus 224 ~~~~~~~~~~--------~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 224 LKIILELPTP--------SLASPLS------------PSNP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHhcCCc--------ccccccC------------cccc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111111000 0000000 0000 1223467789999999999999999887765
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-21 Score=216.16 Aligned_cols=248 Identities=18% Similarity=0.214 Sum_probs=177.7
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc-hh---hHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH-HG---AFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
+|...+.+|++.|=.|.+|+++++. |+||++-... .- ...+...|++ ...++|||++++.-+ ...+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~--vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~-----~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL--VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKV-----LVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce--EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHH-----HHhhHH
Confidence 5777889999999999999999884 9999985333 22 2333344444 455689999998766 334466
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.|+|-+|... +|.|.+. .++-+...+.+.||.|++.|+..+|.. ||+|||||.+||||+.-.-+.|
T Consensus 96 AylvRqyvkh-nLyDRlS----------TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~L 161 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLS----------TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYL 161 (1431)
T ss_pred HHHHHHHHhh-hhhhhhc----------cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhh
Confidence 7889999844 9999985 344678889999999999999999999 9999999999999999999999
Q ss_pred eccccceec--CCCCCc---ccccccccccccccccccCCC----------C-CCcccchHHHHHHHHHHHh-CCCCCCC
Q 043900 788 SDFGLARFL--PLSPAQ---TSSIDAKGSIGYIAPEYGLGS----------E-VSINGDVYSYGILLLELVT-RKKPVDS 850 (953)
Q Consensus 788 ~DfG~a~~~--~~~~~~---~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDv~slG~vl~ellt-g~~pf~~ 850 (953)
+||..-+.. +++... ........-.+|.|||.+... . .+++.||||+|||+.|+++ |++||.-
T Consensus 162 tDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L 241 (1431)
T KOG1240|consen 162 TDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL 241 (1431)
T ss_pred hcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH
Confidence 999876533 221111 111122344579999975431 2 5788999999999999999 7888862
Q ss_pred cccCCccHHHHHHhhCC-ch-hhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHH
Q 043900 851 MFEGDMNLHNFARMALP-DH-VVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTN 928 (953)
Q Consensus 851 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 928 (953)
.+....... .. ....+. ..+ ...+++++..|++.||++|.+|++
T Consensus 242 --------SQL~aYr~~~~~~~e~~Le------------------------~Ie--d~~~Rnlil~Mi~rdPs~RlSAed 287 (1431)
T KOG1240|consen 242 --------SQLLAYRSGNADDPEQLLE------------------------KIE--DVSLRNLILSMIQRDPSKRLSAED 287 (1431)
T ss_pred --------HHHHhHhccCccCHHHHHH------------------------hCc--CccHHHHHHHHHccCchhccCHHH
Confidence 111111111 00 000000 000 124788999999999999999999
Q ss_pred HHHHHHH
Q 043900 929 VVRQLQS 935 (953)
Q Consensus 929 vl~~L~~ 935 (953)
.++..+.
T Consensus 288 yL~~yrG 294 (1431)
T KOG1240|consen 288 YLQKYRG 294 (1431)
T ss_pred HHHhhhc
Confidence 9987544
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=2.9e-20 Score=191.48 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=153.1
Q ss_pred CCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCC----------CCeeEEEeeec
Q 043900 632 GFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRH----------RNLVKILTACS 698 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~ 698 (953)
.+...+.||.|+++.||.+++.++++.+|+|++.... ....+.+.+|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456788999999999999999999999999985322 2345666666654444322 12222222211
Q ss_pred cc---c----cCCCC-----ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 043900 699 GV---D----YQGND-----FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPP 766 (953)
Q Consensus 699 ~~---~----~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 766 (953)
-. . ..+.. ..+++|+-+ .+||.+++........ ....+....++.+..|+++.+++||+. |
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~---~~~~l~~~arl~lT~Q~I~lvA~Lh~~---G 165 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQ---THSPLAFAARLSLTVQMIRLVANLHSY---G 165 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTT---TSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhccc---ccchhHHHHHHHHHHHHHHHHHHHhhc---c
Confidence 00 0 00001 236788877 5688888643221111 123456677788899999999999999 9
Q ss_pred eEeecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCC--------CCCCcccchHHHHHHH
Q 043900 767 ITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLG--------SEVSINGDVYSYGILL 838 (953)
Q Consensus 767 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~slG~vl 838 (953)
++|+||+|+|++++++|.++|+||+.....+.. ... ...+..|.+||.... ..++.+.|.|++|+++
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCce----eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 999999999999999999999999988765321 111 335678999997533 2578899999999999
Q ss_pred HHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccC
Q 043900 839 LELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSME 918 (953)
Q Consensus 839 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 918 (953)
|.|++|+.||+.......... .+. ... +.++.+..++..++++
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~-------------~f~-----------------------~C~-~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEW-------------DFS-----------------------RCR-DMPEPVQFLIRGLLQR 283 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGG-------------GGT-----------------------TSS----HHHHHHHHHHT-S
T ss_pred HHHHHccCCCCCCCccccccc-------------cch-----------------------hcC-CcCHHHHHHHHHHccC
Confidence 999999999985422211000 000 011 5677899999999999
Q ss_pred CCCCC
Q 043900 919 SPGDR 923 (953)
Q Consensus 919 dP~~R 923 (953)
+|++|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=9.5e-20 Score=181.23 Aligned_cols=139 Identities=16% Similarity=0.105 Sum_probs=105.9
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchh--h-------H-----------------HHHHHHHHHHhhcCCCC
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG--A-------F-----------------KSFIAECNTLKNIRHRN 689 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~e~~~l~~l~h~n 689 (953)
...||+|+||.||+|.+. +++.||||+++..... . . .....|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 5679999999743211 0 0 12235999999998776
Q ss_pred eeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHH-hhCCCCCeE
Q 043900 690 LVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYL-HHDCQPPIT 768 (953)
Q Consensus 690 iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~iv 768 (953)
+.....+. . ...++||||++++++..... ....++..++..++.|++.+|+|+ |+. ||+
T Consensus 81 v~~p~~~~----~---~~~~iVmE~i~g~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~l~H~~---gii 140 (190)
T cd05147 81 IPCPEPIL----L---KSHVLVMEFIGDDGWAAPRL----------KDAPLSESKARELYLQVIQIMRILYQDC---RLV 140 (190)
T ss_pred CCCCcEEE----e---cCCEEEEEEeCCCCCcchhh----------hcCCCCHHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 63322221 1 22389999998877654431 123578899999999999999999 687 999
Q ss_pred eecCCCCCeEecCCCcEEEeccccceec
Q 043900 769 HCDLKPSNVLLDEEMMAHVSDFGLARFL 796 (953)
Q Consensus 769 H~Dlkp~NIll~~~~~~kL~DfG~a~~~ 796 (953)
||||||+||+++ ++.++|+|||+|...
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999998 478999999999754
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.81 E-value=7.4e-22 Score=177.99 Aligned_cols=164 Identities=30% Similarity=0.508 Sum_probs=143.4
Q ss_pred cccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCcccc
Q 043900 23 HVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKI 102 (953)
Q Consensus 23 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (953)
.+.++++++.|-||||+++. .|..+.++.+|++|++++|+|+ .+|.+++.++.|+.|+++-|++. ++|..|+.++-|
T Consensus 28 gLf~~s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 35577888999999999997 6667999999999999999998 89999999999999999999998 899999999999
Q ss_pred ceeecccccccc-ccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCC
Q 043900 103 EHLSVSVNNLTG-SIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGM 181 (953)
Q Consensus 103 ~~L~Ls~N~l~~-~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 181 (953)
+.|||++|++.. .+|+.|..|+.|+-|+|++|.+. .+|..++.|++|+.|.+..|.+- .+|+.++.++.|++|++.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 999999998864 57888888999999999999998 78888999999999999999887 7888888888888888888
Q ss_pred ccccccccccc
Q 043900 182 NQLQGVIPLDF 192 (953)
Q Consensus 182 N~l~~~~~~~~ 192 (953)
|+++ .+|.++
T Consensus 183 nrl~-vlppel 192 (264)
T KOG0617|consen 183 NRLT-VLPPEL 192 (264)
T ss_pred ceee-ecChhh
Confidence 8888 555443
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-19 Score=184.66 Aligned_cols=202 Identities=22% Similarity=0.256 Sum_probs=141.7
Q ss_pred CCCCeeEEEeeeccc----------------------ccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHH
Q 043900 686 RHRNLVKILTACSGV----------------------DYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLL 743 (953)
Q Consensus 686 ~h~niv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~ 743 (953)
+|||||++.++|.+. ....+...|+||..++ .+|.+|+.. ...+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----------~~~s~r 341 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----------RHRSYR 341 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----------CCCchH
Confidence 599999999876432 1223456789999985 499999952 345666
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEe--cCCC--cEEEeccccceecCCC----CCcccccccccccccc
Q 043900 744 QRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLL--DEEM--MAHVSDFGLARFLPLS----PAQTSSIDAKGSIGYI 815 (953)
Q Consensus 744 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kL~DfG~a~~~~~~----~~~~~~~~~~gt~~y~ 815 (953)
...-+..|+++|+.|||.+ ||.|||+|++|||+ |+|+ ...++|||.+--.... +.........|...-|
T Consensus 342 ~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lm 418 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLM 418 (598)
T ss_pred HHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceec
Confidence 7788999999999999999 99999999999999 3444 6788999988532211 1112222334777899
Q ss_pred cccccCCCC------CCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcc
Q 043900 816 APEYGLGSE------VSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHG 889 (953)
Q Consensus 816 aPE~~~~~~------~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 889 (953)
|||+....+ -..|+|.|+.|.+.||+++..-||....+...+...+....+
T Consensus 419 APEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL----------------------- 475 (598)
T KOG4158|consen 419 APEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL----------------------- 475 (598)
T ss_pred chhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC-----------------------
Confidence 999865432 236799999999999999999999862221111111111100
Q ss_pred cchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHH
Q 043900 890 NQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQL 933 (953)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 933 (953)
..-+..+++.+.+++...++.||.+||+..-....|
T Consensus 476 --------Palp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 476 --------PALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred --------CCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 111225667788999999999999999876555544
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=7.6e-19 Score=171.21 Aligned_cols=190 Identities=18% Similarity=0.081 Sum_probs=139.6
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeeccch----hhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCce
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH----GAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 708 (953)
.+...|++|+||+||.+... +.+++.+.++.... -....+.+|+++|+++. |+++++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~--~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGG--ERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeecC--CceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 45678999999999987773 34688777753322 11235789999999995 5889999886 346
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecC-CCCCeEecCCCcEEE
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDL-KPSNVLLDEEMMAHV 787 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kL 787 (953)
+++|||++|.+|.+... . ....++.|++.+++++|+. ||+|||| ||+||+++.++.++|
T Consensus 74 ~lvmeyI~G~~L~~~~~--------------~---~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~L 133 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPP--------------R---GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAV 133 (218)
T ss_pred EEEEeeecCccHHhhhh--------------h---hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEE
Confidence 89999999988865431 0 1135778999999999999 9999999 799999999999999
Q ss_pred eccccceecCCCCCc----cc-------ccccccccccccccccCCC-CCC-cccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 788 SDFGLARFLPLSPAQ----TS-------SIDAKGSIGYIAPEYGLGS-EVS-INGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 788 ~DfG~a~~~~~~~~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
+|||+|......... .. ......++.|++|+...-- ..+ .+.+.++-|+-+|.++||+.|+.+..++
T Consensus 134 IDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~ 213 (218)
T PRK12274 134 IDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEG 213 (218)
T ss_pred EECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCC
Confidence 999999865432211 00 0112256777777753221 233 5678899999999999999987654443
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=9.4e-19 Score=175.18 Aligned_cols=139 Identities=19% Similarity=0.160 Sum_probs=108.5
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchh--------------------------hHHHHHHHHHHHhhcCCCC
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG--------------------------AFKSFIAECNTLKNIRHRN 689 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~n 689 (953)
...||+|++|.||+|++. +++.||||+++..... ....+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 6679999999743211 0122457899999999988
Q ss_pred eeEEEeeecccccCCCCceeEEEeeccCCchhhc-cccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCe
Q 043900 690 LVKILTACSGVDYQGNDFKALVFEFMQNRSLEEW-LHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPI 767 (953)
Q Consensus 690 iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~i 767 (953)
+.....+.. ...++||||++++++... +. ...++..+...++.|++.++.++|+ . ||
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~-----------~~~~~~~~~~~i~~~l~~~l~~lH~~~---gi 139 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLK-----------DVPLEEEEAEELYEQVVEQMRRLYQEA---GL 139 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhh-----------hccCCHHHHHHHHHHHHHHHHHHHHhC---CE
Confidence 744433311 124899999988755333 21 1246788899999999999999999 8 99
Q ss_pred EeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 768 THCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 768 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
+||||||+||+++ ++.++|+|||+|+...
T Consensus 140 vHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 140 VHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred ecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 9999999999998 8899999999998764
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=7.2e-21 Score=171.67 Aligned_cols=161 Identities=27% Similarity=0.499 Sum_probs=151.9
Q ss_pred cEEEEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEecc
Q 043900 5 RVKILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLF 84 (953)
Q Consensus 5 ~~~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~ 84 (953)
.++.|.|++++++ .+|+.|..|.+|++|++++|+|+. +|..++.+++|+.|+++-|++. .+|..|+.++.|+.|||.
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 4678899999997 999999999999999999999998 8999999999999999999999 999999999999999999
Q ss_pred Ccccc-ccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCC
Q 043900 85 YNELV-GKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGT 163 (953)
Q Consensus 85 ~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 163 (953)
+|.+. ..+|..|..++.|+.|+|++|.++ .+|..+++|++|+.|.+.+|.+- ..|..++.|+.|++|++.+|+++ .
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-v 187 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-V 187 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-e
Confidence 99996 578999999999999999999999 89999999999999999999997 79999999999999999999999 7
Q ss_pred CCCccccc
Q 043900 164 IPSSIFNI 171 (953)
Q Consensus 164 ~p~~l~~l 171 (953)
+|..++++
T Consensus 188 lppel~~l 195 (264)
T KOG0617|consen 188 LPPELANL 195 (264)
T ss_pred cChhhhhh
Confidence 77766654
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=4.9e-19 Score=193.98 Aligned_cols=219 Identities=24% Similarity=0.349 Sum_probs=161.7
Q ss_pred HhhcCCCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh
Q 043900 682 LKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH 761 (953)
Q Consensus 682 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~ 761 (953)
|+.+.|.|+.+++|.|... ...++|.+|+..|+|.+.+.. ....+++.-...+.++|++||+|+|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---------~~~~~d~~F~~s~~rdi~~Gl~ylh~ 66 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---------EDIKLDYFFILSFIRDISKGLAYLHN 66 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---------cccCccHHHHHHHHHHHHHHHHHHhc
Confidence 4567899999999997643 788999999999999999964 23468999999999999999999998
Q ss_pred CCCCCe-EeecCCCCCeEecCCCcEEEeccccceecCCCCCcccccccccccccccccccCCC-------CCCcccchHH
Q 043900 762 DCQPPI-THCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGS-------EVSINGDVYS 833 (953)
Q Consensus 762 ~~~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDv~s 833 (953)
. +| .|+.+++.|.++|....+||+|||+.................-..-|.|||.+.+. ..+.++||||
T Consensus 67 s---~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs 143 (484)
T KOG1023|consen 67 S---PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYS 143 (484)
T ss_pred C---cceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeeh
Confidence 7 44 99999999999999999999999999876431111111222245679999998764 1467799999
Q ss_pred HHHHHHHHHhCCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhh
Q 043900 834 YGILLLELVTRKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGV 913 (953)
Q Consensus 834 lG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 913 (953)
||++++|+++.+.||+........ .+.+..... ....... + . .....+..+++..++.
T Consensus 144 ~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-~~~~~~r----P---------------~-i~~~~e~~~~l~~l~~ 201 (484)
T KOG1023|consen 144 FGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-GGSNPFR----P---------------S-IELLNELPPELLLLVA 201 (484)
T ss_pred HHHHHHHHHhccCccccccccCCh-HHHHHHHHh-cCCCCcC----c---------------c-hhhhhhcchHHHHHHH
Confidence 999999999999999864333221 111111000 0000000 0 0 1111144557999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHH
Q 043900 914 ACSMESPGDRMNMTNVVRQLQSIKNI 939 (953)
Q Consensus 914 ~cl~~dP~~RPt~~evl~~L~~i~~~ 939 (953)
+||..+|++||++++|-..++.+...
T Consensus 202 ~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 202 RCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred HhcccChhhCccHHHHHhhhhhhccc
Confidence 99999999999999999998887654
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.1e-18 Score=204.15 Aligned_cols=198 Identities=21% Similarity=0.217 Sum_probs=156.3
Q ss_pred HHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcC---CCCeeEEEeeecccccC
Q 043900 627 YNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIR---HRNLVKILTACSGVDYQ 703 (953)
Q Consensus 627 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~ 703 (953)
+...+.|.+.+.||+|+||+||+|+..+ ++.||+|+-++... .+|.--.+++.+++ -+.|..+...+ .
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~-----~ 764 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAH-----V 764 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHH-----c
Confidence 3345678899999999999999999988 67999999864332 22222233444444 22333333321 2
Q ss_pred CCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEec---
Q 043900 704 GNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLD--- 780 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--- 780 (953)
..+.-++|+||.+.|+|.+++. ..+.++|.-++.++.|+++.+++||.. +||||||||+|.|+.
T Consensus 765 ~~~~S~lv~ey~~~Gtlld~~N----------~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~ 831 (974)
T KOG1166|consen 765 FQNASVLVSEYSPYGTLLDLIN----------TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREI 831 (974)
T ss_pred cCCcceeeeeccccccHHHhhc----------cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeeccc
Confidence 2355689999999999999996 234689999999999999999999999 999999999999994
Q ss_pred ----CCCcEEEeccccceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCC
Q 043900 781 ----EEMMAHVSDFGLARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKK 846 (953)
Q Consensus 781 ----~~~~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~ 846 (953)
+...++|+|||.+..+..-+........++|-.+-.+|+..|++|+.++|-|.++.+++-|+.|+.
T Consensus 832 ~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 832 CADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 234799999999987755555556667789999999999999999999999999999999999875
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=1.5e-17 Score=166.50 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=105.6
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-----CCCCeeEEEeeecccccCCCCc-
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-----RHRNLVKILTACSGVDYQGNDF- 707 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~- 707 (953)
.-.+.||+|+||.||. +..+... +||++........+.+.+|+.+++.+ .||||++++|++.+. ...+.
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeEE
Confidence 3457899999999995 5555534 69988765444567899999999999 579999999997542 11133
Q ss_pred eeEEEee--ccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHH-HHHhhCCCCCeEeecCCCCCeEecC---
Q 043900 708 KALVFEF--MQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACAL-SYLHHDCQPPITHCDLKPSNVLLDE--- 781 (953)
Q Consensus 708 ~~lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~--- 781 (953)
..+|+|| +++|+|.++++.. .+++. ..++.|++.++ +|||++ +|+||||||+||+++.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-----------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~ 143 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-----------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISE 143 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-----------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCC
Confidence 3478999 5579999999521 24444 35678888777 999999 9999999999999974
Q ss_pred -CCcEEEeccccc
Q 043900 782 -EMMAHVSDFGLA 793 (953)
Q Consensus 782 -~~~~kL~DfG~a 793 (953)
++.++|+||+.+
T Consensus 144 ~~~~~~LiDg~G~ 156 (210)
T PRK10345 144 SEVIPVVCDNIGE 156 (210)
T ss_pred CCCcEEEEECCCC
Confidence 338999995444
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2.9e-17 Score=169.17 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=110.7
Q ss_pred CCcccCcccccceeeEEEEE-EcCCCeEEEEEEeeccchh------------------------hHHHHHHHHHHHhhcC
Q 043900 632 GFASANEIGVGSFGSVYKGI-LDQGKTTVAVKVFNLLHHG------------------------AFKSFIAECNTLKNIR 686 (953)
Q Consensus 632 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 686 (953)
.|++.+.||+|+||.||+|. +..+++.||+|+++..... ....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999999 5556779999998743210 1123568999999996
Q ss_pred C--CCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCC
Q 043900 687 H--RNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQ 764 (953)
Q Consensus 687 h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 764 (953)
+ ..+.+++++ ...++||||++++++..+... .......+...++.|++.++++||+.
T Consensus 109 ~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~-- 167 (237)
T smart00090 109 EAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLK----------DVEPEEEEEFELYDDILEEMRKLYKE-- 167 (237)
T ss_pred hcCCCCCeeeEe---------cCceEEEEEecCCcccccccc----------cCCcchHHHHHHHHHHHHHHHHHHhc--
Confidence 5 334455543 234799999999888765421 12345566789999999999999999
Q ss_pred CC-eEeecCCCCCeEecCCCcEEEeccccceec
Q 043900 765 PP-ITHCDLKPSNVLLDEEMMAHVSDFGLARFL 796 (953)
Q Consensus 765 ~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 796 (953)
+ ++||||||+||+++ ++.++|+|||.|...
T Consensus 168 -g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 168 -GELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred -CCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9 99999999999999 889999999999754
No 443
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=1.2e-18 Score=186.45 Aligned_cols=125 Identities=28% Similarity=0.465 Sum_probs=108.7
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
.+.+|.|++|...+|.+|+...... ...++...+.++.|++.|++| + +.+|||+||.||+...+..+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~-------e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~ 395 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG-------EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQL 395 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc-------cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhh
Confidence 4578999999999999999644322 356788899999999999999 5 89999999999999999999
Q ss_pred EEeccccceecCCCC----CcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHh
Q 043900 786 HVSDFGLARFLPLSP----AQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVT 843 (953)
Q Consensus 786 kL~DfG~a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~ellt 843 (953)
||.|||+........ .....+...||..||+||.+.+..|+.++||||+|++++|+++
T Consensus 396 kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 999999998775544 2334456679999999999999999999999999999999997
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=8.3e-20 Score=200.71 Aligned_cols=59 Identities=19% Similarity=0.312 Sum_probs=31.9
Q ss_pred cCcEEEcccCcccc----cCCccccCCCCCCEEEeecCccccc----CCcCccCC-CCCCeEEecccc
Q 043900 300 TLEMLLLDNNKIFG----NIPAAIGKFVNLQRLEMWNNRLSGT----IPPAIGEL-QNLRELRLQRNK 358 (953)
Q Consensus 300 ~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l-~~L~~L~L~~N~ 358 (953)
.|+.|++++|.++. .....+..+++|+++++++|.++.. ....+... +.|++|++.+|.
T Consensus 251 ~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 251 SLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred CceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 55666666665541 1223344456667777777776633 33333333 566666666654
No 445
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.4e-18 Score=186.56 Aligned_cols=187 Identities=27% Similarity=0.265 Sum_probs=150.5
Q ss_pred cccccceeeEEEEEE---cCCCeEEEEEEeeccchh--hHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCCCceeEE
Q 043900 638 EIGVGSFGSVYKGIL---DQGKTTVAVKVFNLLHHG--AFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGNDFKALV 711 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 711 (953)
++|+|+||.|+.+.- .+.+..+|.|+.+..... .......|..++...+ ||.++++... ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 479999999987553 344456888887533221 1124456777888886 9999999766 4556888999
Q ss_pred EeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccc
Q 043900 712 FEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFG 791 (953)
Q Consensus 712 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 791 (953)
++|..+|++...+.. ...+++.....+...++-|++++|+. +++|||+|++||+++.+|.+++.|||
T Consensus 76 ld~~rgg~lft~l~~----------~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfg 142 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSK----------EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFG 142 (612)
T ss_pred hhhcccchhhhcccc----------CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCch
Confidence 999999999988853 23567777888888999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 043900 792 LARFLPLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDS 850 (953)
Q Consensus 792 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~ 850 (953)
.++..-..... +||..|||||++. ....++|.||||++++||+||..||..
T Consensus 143 lske~v~~~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 143 LSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhHhHhhhhc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 99865322211 7999999999987 467889999999999999999999975
No 446
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=4.4e-19 Score=194.97 Aligned_cols=178 Identities=22% Similarity=0.289 Sum_probs=103.0
Q ss_pred EEEeCCCeee-eecCccccCCccCceeecCCCccCcC----CCccCCCCCCCcEEeCCCCccc------cccCcCccCCC
Q 043900 8 ILNLTSLKLA-GSISPHVGNLSFLKVLLLYNNSFNHG----IPSEFDRLQRLQVLALNNNSIG------GEIPANISSCS 76 (953)
Q Consensus 8 ~l~l~~~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~------~~~p~~~~~l~ 76 (953)
.|+|..+++. +.....+..+.+|++|++++|.++.. ++..+...+.|++|+++++.+. ..++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3666677665 45555666777788888888877542 4445566677778888777765 12334455666
Q ss_pred CCcEEeccCccccccCCcccCCccc---cceeecccccccc----ccCCcccCC-CcccEEeccccccccc----CCccc
Q 043900 77 NLIQIRLFYNELVGKIPSELGSLSK---IEHLSVSVNNLTG----SIPSSLGNL-SSINTLFLTDNNLDGG----IPDTF 144 (953)
Q Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~L-~~L~~L~L~~N~l~~~----~~~~~ 144 (953)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..|
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7777777777766444444544444 6777777666652 222334455 6666666666666522 22334
Q ss_pred cccccccceecccccccCC----CCCcccccccceEEecCCcccc
Q 043900 145 GWLKNLATLAMAENWLSGT----IPSSIFNISSITAFDAGMNQLQ 185 (953)
Q Consensus 145 ~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 185 (953)
..+++|++|+|++|.+++. ++..+..+++|++|++++|.++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 206 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLT 206 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccC
Confidence 4555666666666665521 1222333345555555555554
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=3.5e-16 Score=160.45 Aligned_cols=134 Identities=19% Similarity=0.236 Sum_probs=107.7
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccch--------hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCce
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH--------GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFK 708 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 708 (953)
+.||+|++|.||+|.+.+ ..|++|+...... .....+.+|++++..+.|+++.....++.. ....
T Consensus 2 ~~l~~G~~~~vy~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLG--IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-----PENF 74 (211)
T ss_pred cccccCceEEEEEEeeCC--CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-----CCCC
Confidence 579999999999999843 4688998653221 112457889999999999887666555422 2567
Q ss_pred eEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEe
Q 043900 709 ALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVS 788 (953)
Q Consensus 709 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 788 (953)
++||||++|++|.+++.. ..+ ++..++.+++.++.++|+. +++|||++|+||+++ ++.++++
T Consensus 75 ~lv~e~~~G~~L~~~~~~-------------~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~li 136 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS-------------NGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLI 136 (211)
T ss_pred EEEEEEeCCcCHHHHHHh-------------ccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEE
Confidence 899999999999998841 112 7889999999999999999 999999999999999 7889999
Q ss_pred cccccee
Q 043900 789 DFGLARF 795 (953)
Q Consensus 789 DfG~a~~ 795 (953)
|||.+..
T Consensus 137 Df~~a~~ 143 (211)
T PRK14879 137 DFGLAEF 143 (211)
T ss_pred ECCcccC
Confidence 9998864
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=4.7e-16 Score=157.22 Aligned_cols=141 Identities=19% Similarity=0.147 Sum_probs=109.5
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchh----------------------hHHHHHHHHHHHhhc
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG----------------------AFKSFIAECNTLKNI 685 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l 685 (953)
.....|.+.+.||+|+||.||+|... +++.||||+++..... .......|..++.++
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 33334888899999999999999986 4569999987632210 112367788889988
Q ss_pred CCC--CeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCC
Q 043900 686 RHR--NLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDC 763 (953)
Q Consensus 686 ~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~ 763 (953)
.|+ .+.+.++. ...++||||+++++|...... .....++.+++.++.++|+.
T Consensus 91 ~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~----------------~~~~~~~~~i~~~l~~lh~~- 144 (198)
T cd05144 91 YEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL----------------EDPEEVLDEILEEIVKAYKH- 144 (198)
T ss_pred HHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc----------------ccHHHHHHHHHHHHHHHHHC-
Confidence 777 44444443 345899999999998765420 23467889999999999998
Q ss_pred CCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 764 QPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 764 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
+++||||||+||++++++.++|+|||.+....
T Consensus 145 --gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 --GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred --CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999997543
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=9.6e-17 Score=183.62 Aligned_cols=212 Identities=23% Similarity=0.264 Sum_probs=145.1
Q ss_pred HhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCc
Q 043900 628 NATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDF 707 (953)
Q Consensus 628 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 707 (953)
....+|..++.|..|+||.||.++++.+.+.+|.|+=+... ++ .||..+. +.
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l------------il-----Rnilt~a-----------~n 131 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL------------IL-----RNILTFA-----------GN 131 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhhcccccch------------hh-----hcccccc-----------CC
Confidence 34568999999999999999999999998899996532110 11 1122222 12
Q ss_pred eeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEE
Q 043900 708 KALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHV 787 (953)
Q Consensus 708 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 787 (953)
.++| ||-...++... .++. +++.+++|+|+. ||+|||+||+|.+|+.-|.+|+
T Consensus 132 pfvv------gDc~tllk~~g----------~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKl 184 (1205)
T KOG0606|consen 132 PFVV------GDCATLLKNIG----------PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKL 184 (1205)
T ss_pred ccee------chhhhhcccCC----------CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccc
Confidence 2333 44444443211 2222 227899999999 9999999999999999999999
Q ss_pred eccccceecCCCC-------------CcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccC
Q 043900 788 SDFGLARFLPLSP-------------AQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEG 854 (953)
Q Consensus 788 ~DfG~a~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~ 854 (953)
.|||+++..-... ........+||+.|+|||++....|+..+|.|++|+++||.+.|+.||.+...+
T Consensus 185 TDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 185 TDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred cchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 9999987532111 111223457999999999999999999999999999999999999999763222
Q ss_pred CccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCC
Q 043900 855 DMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRM 924 (953)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 924 (953)
+ .+.+.+...+ .+ .++.+..+++..+++.+.++.+|..|-
T Consensus 265 e-lfg~visd~i-----~w------------------------pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 265 E-LFGQVISDDI-----EW------------------------PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred H-HHhhhhhhhc-----cc------------------------cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 1 1111111110 00 001113356788899999999999994
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.2e-15 Score=175.82 Aligned_cols=144 Identities=19% Similarity=0.221 Sum_probs=112.4
Q ss_pred HHHHHHhhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEe--eccc------hhhHHHHHHHHHHHhhcCCCCeeEEE
Q 043900 623 YQNLYNATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVF--NLLH------HGAFKSFIAECNTLKNIRHRNLVKIL 694 (953)
Q Consensus 623 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~--~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~ 694 (953)
+.........|...+.||+|+||+||+|.+.... +++|+. +... ....+.+.+|++++++++|++++...
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 3333344455677899999999999999987654 444432 2111 11235688999999999999988876
Q ss_pred eeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCC
Q 043900 695 TACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKP 774 (953)
Q Consensus 695 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 774 (953)
.++.. ....++||||+++++|.+++. ....++.++++++.|||+. +++|||+||
T Consensus 403 ~~~~~-----~~~~~lv~E~~~g~~L~~~l~------------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp 456 (535)
T PRK09605 403 IYDVD-----PEEKTIVMEYIGGKDLKDVLE------------------GNPELVRKVGEIVAKLHKA---GIVHGDLTT 456 (535)
T ss_pred EEEEe-----CCCCEEEEEecCCCcHHHHHH------------------HHHHHHHHHHHHHHHHHhC---CCccCCCCh
Confidence 66432 245689999999999998873 3567999999999999999 999999999
Q ss_pred CCeEecCCCcEEEecccccee
Q 043900 775 SNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 775 ~NIll~~~~~~kL~DfG~a~~ 795 (953)
+||++ .++.++|+|||+++.
T Consensus 457 ~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 457 SNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHEEE-ECCcEEEEeCccccc
Confidence 99999 677899999999975
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=2e-15 Score=153.14 Aligned_cols=130 Identities=19% Similarity=0.230 Sum_probs=100.8
Q ss_pred cccccceeeEEEEEEcCCCeEEEEEEeeccc---h-----hhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCcee
Q 043900 638 EIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---H-----GAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
.||+|+||.||+|.+.+ ..|++|+..... . ....++.+|++++..++|+++.....++. .....+
T Consensus 1 ~ig~G~~~~vy~~~~~~--~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLG--LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecCC--ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 48999999999999644 479999864221 1 12356778999999998876543333322 124568
Q ss_pred EEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 710 LVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 710 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
+||||++|++|.+++... . ..++.+++.+|.++|+. +++|||++|+||+++ ++.++++|
T Consensus 74 lv~e~~~g~~l~~~~~~~-----------~------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liD 132 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEG-----------N------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLID 132 (199)
T ss_pred EEEEEECCccHHHHHhhc-----------H------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEE
Confidence 999999999999887310 0 07899999999999999 999999999999999 78999999
Q ss_pred ccccee
Q 043900 790 FGLARF 795 (953)
Q Consensus 790 fG~a~~ 795 (953)
||.+..
T Consensus 133 fg~a~~ 138 (199)
T TIGR03724 133 FGLGKY 138 (199)
T ss_pred CCCCcC
Confidence 999875
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.2e-14 Score=145.95 Aligned_cols=135 Identities=21% Similarity=0.224 Sum_probs=97.0
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchh--hHHH----------------------HHHHHHHHhhcCCC--C
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG--AFKS----------------------FIAECNTLKNIRHR--N 689 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~--n 689 (953)
.+.||+|+||+||+|.+. +++.||||+++..... .... ...|...+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 5568999998643211 1111 13455666666433 2
Q ss_pred eeEEEeeecccccCCCCceeEEEeeccCCchhhc-cccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhh-CCCCCe
Q 043900 690 LVKILTACSGVDYQGNDFKALVFEFMQNRSLEEW-LHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHH-DCQPPI 767 (953)
Q Consensus 690 iv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~i 767 (953)
+.+.+++ ...++||||++++++... +... ... .+...++.+++.++.++|. . +|
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~-----------~~~-~~~~~~~~~~~~~l~~lh~~~---~i 136 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV-----------RLL-EDPEELYDQILELMRKLYREA---GL 136 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhh-----------hhc-ccHHHHHHHHHHHHHHHhhcc---Cc
Confidence 4444443 345899999998654321 1100 001 5678899999999999999 7 99
Q ss_pred EeecCCCCCeEecCCCcEEEeccccceec
Q 043900 768 THCDLKPSNVLLDEEMMAHVSDFGLARFL 796 (953)
Q Consensus 768 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 796 (953)
+||||||+||+++ ++.++++|||.+...
T Consensus 137 vH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 137 VHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 9999999999999 889999999999754
No 453
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=3.6e-16 Score=180.75 Aligned_cols=257 Identities=24% Similarity=0.235 Sum_probs=190.5
Q ss_pred hcCCcccCcccccceeeEEEEEEcC-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhhcC-CCCeeEEEeeecccccCCC
Q 043900 630 TDGFASANEIGVGSFGSVYKGILDQ-GKTTVAVKVFNLLH--HGAFKSFIAECNTLKNIR-HRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 630 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 705 (953)
...|...+.||+|+|+.|-.+.... ....+|+|.+.... .........|..+-+.+. |+|++++++. ....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 3457788889999999999888743 33457777765332 223344455777777776 9999999987 5566
Q ss_pred CceeEEEeeccCCchhhccc-cCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHh-hCCCCCeEeecCCCCCeEecCCC
Q 043900 706 DFKALVFEFMQNRSLEEWLH-PITREDKTEEAPRSLNLLQRLNIGIDVACALSYLH-HDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
+..++++||..++++.+.+. ... ...+......+..|+..++.|+| .. +++|||+||+|.+++..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~---------~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~ 161 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS---------TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESG 161 (601)
T ss_pred cccccccCcccccccccccccCCc---------cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCC
Confidence 88999999999999998883 211 13455566788999999999999 77 999999999999999999
Q ss_pred -cEEEeccccceecCC-CCCccccccccc-ccccccccccCCC-CCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHH
Q 043900 784 -MAHVSDFGLARFLPL-SPAQTSSIDAKG-SIGYIAPEYGLGS-EVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLH 859 (953)
Q Consensus 784 -~~kL~DfG~a~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~ 859 (953)
..+++|||+|..+.. ...........| ++.|+|||...+. -..+..|+||.|+++.-+++|..||+.....+..+.
T Consensus 162 ~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~ 241 (601)
T KOG0590|consen 162 SALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS 241 (601)
T ss_pred CcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce
Confidence 999999999998876 555555566678 9999999998884 456789999999999999999999986555443333
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
.|........ . ...........++...++..+|..|.+.+++..
T Consensus 242 ~~~~~~~~~~--------~--------------------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 242 SWKSNKGRFT--------Q--------------------LPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred eecccccccc--------c--------------------CccccCChhhhhcccccccCCchhccccccccc
Confidence 3332210000 0 000012234567788888899999999887754
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=2.6e-14 Score=138.22 Aligned_cols=135 Identities=20% Similarity=0.244 Sum_probs=110.9
Q ss_pred ccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCC--CCeeEEEeeecccccCCCCceeEEE
Q 043900 635 SANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRH--RNLVKILTACSGVDYQGNDFKALVF 712 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 712 (953)
+.+.||+|.++.||++...+ ..+++|..+.... ...+.+|+..++.++| ..+++++++. ...+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 35789999999999999866 4799999865433 4678899999999976 5888888774 2336789999
Q ss_pred eeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 713 EFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 713 e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
||++++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.
T Consensus 73 e~~~g~~~~~~-----------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 73 EWIEGETLDEV-----------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred EecCCeecccC-----------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 99988766543 3456678899999999999986445799999999999999989999999999
Q ss_pred cee
Q 043900 793 ARF 795 (953)
Q Consensus 793 a~~ 795 (953)
++.
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 874
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=6.1e-16 Score=165.36 Aligned_cols=176 Identities=34% Similarity=0.478 Sum_probs=124.3
Q ss_pred CEEEeecCcccccCCcCccCCCCCCeEEeccccccCCCCCCCCCceeeEEEccCCcCCCCCCccCCCCCCCcEEEcCCCc
Q 043900 326 QRLEMWNNRLSGTIPPAIGELQNLRELRLQRNKFLGNIPPSIGNLKVFNLDLSCNFLQGSIPSSLGQYKTLTIIDLSDNN 405 (953)
Q Consensus 326 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~l~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 405 (953)
...||+.|++. .+|..++.+..|..+.|..|.|. .+|..++++..|++|||+.|+
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r------------------------~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR------------------------TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce------------------------ecchhhhhhhHHHHhhhccch
Confidence 34455555554 45555555555555555555444 567777777777777777777
Q ss_pred cCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCc
Q 043900 406 LTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPS 485 (953)
Q Consensus 406 l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 485 (953)
++ .+|..+|.+. |+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|.
T Consensus 133 lS-~lp~~lC~lp--Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 133 LS-HLPDGLCDLP--LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred hh-cCChhhhcCc--ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 77 7777776665 446777777777 67777777778888888888887 67777888888888888888887 4666
Q ss_pred cccCCCCCcEEECCCCcccccCCccccccccCceEeccCCcCcccCCCC
Q 043900 486 SLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLSNNNLEGMVPIE 534 (953)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 534 (953)
.+..| .|..||+|.|+++ .+|-.|.+|..|++|-|.+|+|..++...
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAqI 253 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQI 253 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHHH
Confidence 67744 5778888888887 67888888888888888888887655443
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.50 E-value=1.6e-14 Score=170.06 Aligned_cols=119 Identities=34% Similarity=0.520 Sum_probs=96.3
Q ss_pred ccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCcccccCCccccccccCceEecc
Q 043900 444 NLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNNLSGKIPEFLVGFQLLENLNLS 523 (953)
Q Consensus 444 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~ 523 (953)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|||++|+++|.+|+.+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37788888888888888888888889999999998888888888888889999999999988888888888889999999
Q ss_pred CCcCcccCCCCC--cccccccccccCCcCCCCCCCCCCCCcccc
Q 043900 524 NNNLEGMVPIEG--VFKNATITSVLGNLKLCGGIPEFQLPTCIS 565 (953)
Q Consensus 524 ~N~l~~~~p~~~--~~~~~~~~~~~~n~~lcg~~~~~~~~~c~~ 565 (953)
+|+++|.+|..- .+.......+.+|+.+||.+. .+.|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCcc
Confidence 999888888641 122334567889999998543 356753
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=1.5e-13 Score=141.96 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=103.5
Q ss_pred cCccc-ccceeeEEEEEEcCCCeEEEEEEeeccc-------------hhhHHHHHHHHHHHhhcCCCCe--eEEEeeecc
Q 043900 636 ANEIG-VGSFGSVYKGILDQGKTTVAVKVFNLLH-------------HGAFKSFIAECNTLKNIRHRNL--VKILTACSG 699 (953)
Q Consensus 636 ~~~ig-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~ 699 (953)
...|| .|+.|+||.+...+ ..+|||.+.... ......+.+|++++.++.|+++ ++.++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~--~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPG--VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEeCC--ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35687 88999999988863 468999885211 1223567889999999988774 666666432
Q ss_pred cccCCCCceeEEEeeccC-CchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeE
Q 043900 700 VDYQGNDFKALVFEFMQN-RSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVL 778 (953)
Q Consensus 700 ~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 778 (953)
. .......++||||+++ .+|.+++.. ..++.. .+.+++.++.+||+. ||+||||||+|||
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~-----------~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NIL 174 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQE-----------APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNIL 174 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhc-----------CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEE
Confidence 1 1111234699999997 689888742 123332 357899999999999 9999999999999
Q ss_pred ecCCCcEEEecccccee
Q 043900 779 LDEEMMAHVSDFGLARF 795 (953)
Q Consensus 779 l~~~~~~kL~DfG~a~~ 795 (953)
++.++.++|+|||.++.
T Consensus 175 v~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 175 LDPDGKFWLIDFDRGEL 191 (239)
T ss_pred EcCCCCEEEEECCCccc
Confidence 99989999999999875
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=1.5e-15 Score=162.47 Aligned_cols=198 Identities=22% Similarity=0.365 Sum_probs=164.8
Q ss_pred eeecCCCccCcCCCccC-CCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeecccc
Q 043900 32 VLLLYNNSFNHGIPSEF-DRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVN 110 (953)
Q Consensus 32 ~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 110 (953)
+|.|++-++....-.++ ..+..-+..||+.|++. ++|..+..+..|+.+.|++|.+. .+|..++++..|.+|||+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 47777777776332333 45666778899999988 88988888888999999999988 88888999999999999999
Q ss_pred ccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCccccccccc
Q 043900 111 NLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPL 190 (953)
Q Consensus 111 ~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 190 (953)
+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..|+.+.|.|. .+|..+.++.+|+.|.++.|++. .+|.
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~ 206 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPE 206 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCH
Confidence 998 7787777764 889999999998 88888888889999999999998 78888899999999999999988 5666
Q ss_pred ccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCC
Q 043900 191 DFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPY 239 (953)
Q Consensus 191 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (953)
++. --.|..||++.|++. .+|-.|.+|++|++|-|++|.|...+..
T Consensus 207 El~--~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 207 ELC--SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred HHh--CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 664 346888999999999 7899999999999999999999865543
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=1.2e-13 Score=156.07 Aligned_cols=200 Identities=30% Similarity=0.431 Sum_probs=159.7
Q ss_pred EEEeCCCeeeeecCccccCCccCceeecCCCccCcCCCccCCCCC-CCcEEeCCCCccccccCcCccCCCCCcEEeccCc
Q 043900 8 ILNLTSLKLAGSISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQ-RLQVLALNNNSIGGEIPANISSCSNLIQIRLFYN 86 (953)
Q Consensus 8 ~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 86 (953)
.+++..+.+. .....+..++.++.|++.+|.++. +|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 3566666653 334455666888999999999997 666677774 8999999999998 77788899999999999999
Q ss_pred cccccCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCC
Q 043900 87 ELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPS 166 (953)
Q Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 166 (953)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+..++++..|.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 998 67777668889999999999998 77766667777999999999654 57777888999999999999987 5578
Q ss_pred cccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCC
Q 043900 167 SIFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAI 217 (953)
Q Consensus 167 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 217 (953)
.+..+++++.|++++|+++.. +. ...+.+++.|++++|.+....+...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i-~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSI-SS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhccccccceecccccccccc-cc--ccccCccCEEeccCccccccchhhh
Confidence 888888899999999999843 33 3378899999999998886555443
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=1.9e-13 Score=154.53 Aligned_cols=198 Identities=29% Similarity=0.465 Sum_probs=150.3
Q ss_pred eeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCC-CCcEEeccCccccccCCcccCCccccceeecccc
Q 043900 32 VLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCS-NLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVN 110 (953)
Q Consensus 32 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 110 (953)
.|+++.|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 57888888754 4555667788888888888888 7787777775 8888888888887 66677888888888888888
Q ss_pred ccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCccccccccc
Q 043900 111 NLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQGVIPL 190 (953)
Q Consensus 111 ~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 190 (953)
+++ .+|...+.+++|+.|++++|++. .+|.....+..|++|.+++|++. ..+..+.++.++..+.+.+|++.. ++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 888 66666667888888888888887 67776666777888888888654 566777888888888888888773 233
Q ss_pred ccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCC
Q 043900 191 DFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPY 239 (953)
Q Consensus 191 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (953)
.+. .+++++.|++++|+++.. +. ++.+.+++.|++++|.+...++.
T Consensus 250 ~~~-~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIG-NLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhc-cccccceecccccccccc-cc-ccccCccCEEeccCccccccchh
Confidence 332 667788888888888733 33 77888888888888887766543
No 461
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=3.1e-13 Score=135.49 Aligned_cols=162 Identities=22% Similarity=0.359 Sum_probs=123.7
Q ss_pred HHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHH
Q 043900 679 CNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSY 758 (953)
Q Consensus 679 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~ 758 (953)
...+-.+.|.|++++..|+.+..+.+.....+++|||..|++..++++..+. ...+......+|+-||..||.|
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~------~~a~~~~~wkkw~tqIlsal~y 191 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN------QKALFQKAWKKWCTQILSALSY 191 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh------hhhhhHHHHHHHHHHHHhhhhh
Confidence 4445566799999999997766565667788999999999999999865543 4568888899999999999999
Q ss_pred HhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCC--CCCcccccccccccccccccccCCCCCCcccchHHHHH
Q 043900 759 LHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPL--SPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGI 836 (953)
Q Consensus 759 LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~ 836 (953)
||+. .|.|+|+++..+-|++..+|-+|++--.-...... ...........+-++|.|||.-.....+.++|||+||+
T Consensus 192 Lhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgm 270 (458)
T KOG1266|consen 192 LHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGM 270 (458)
T ss_pred hhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhH
Confidence 9984 88999999999999999999888753211111100 00011111223678999999866667788999999999
Q ss_pred HHHHHHhCCCC
Q 043900 837 LLLELVTRKKP 847 (953)
Q Consensus 837 vl~elltg~~p 847 (953)
...||..+..-
T Consensus 271 cAlemailEiq 281 (458)
T KOG1266|consen 271 CALEMAILEIQ 281 (458)
T ss_pred HHHHHHHheec
Confidence 99999988753
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=4.1e-12 Score=142.98 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=99.6
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhH----------------------------------------HHH
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAF----------------------------------------KSF 675 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~ 675 (953)
.+.||.|++|.||+|+.+++ +.||||+.++...... -++
T Consensus 122 ~~plasaSigQVh~A~l~~G-~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDG-KEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEecCC-CEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 36799999999999999865 5999999864321110 124
Q ss_pred HHHHHHHhhc----CCCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHH
Q 043900 676 IAECNTLKNI----RHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGID 751 (953)
Q Consensus 676 ~~e~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~ 751 (953)
.+|+..+.++ +|..-+.+-.++. ......++||||++|++|.++...... .. .+.+++.+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~~~~~~~~~---------~~---~~~~ia~~ 264 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW----DRTSERVLTMEWIDGIPLSDIAALDEA---------GL---DRKALAEN 264 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh----hhcCCceEEEEeECCcccccHHHHHhc---------CC---CHHHHHHH
Confidence 5566666555 2333333333332 122457899999999999887642110 11 23456777
Q ss_pred HHH-HHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 752 VAC-ALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 752 i~~-~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
++. .+..+|.. |++|+|++|.||++++++.++++|||++..+.
T Consensus 265 ~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 265 LARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 666 46788988 99999999999999999999999999998764
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.5e-12 Score=141.42 Aligned_cols=199 Identities=26% Similarity=0.290 Sum_probs=155.0
Q ss_pred CCcccCcccc--cceeeEEEEEE--cCCCeEEEEEEee--ccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecccccCC
Q 043900 632 GFASANEIGV--GSFGSVYKGIL--DQGKTTVAVKVFN--LLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 632 ~~~~~~~ig~--G~~g~Vy~~~~--~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 704 (953)
.|.+.+.+|. |.+|.||.+.. ..+...+|+|.-+ .........-.+|+..-+++ .|++.++.... +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4566788999 99999999998 7777889999854 22223334455677777777 59999986555 666
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHH----HHHHHhhCCCCCeEeecCCCCCeEec
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVAC----ALSYLHHDCQPPITHCDLKPSNVLLD 780 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll~ 780 (953)
.+..++-+|++ +.++.++.+... ..++....+.+..+... |+.++|.. +++|-|+||+||+..
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~---------~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~ 256 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPC---------NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTT 256 (524)
T ss_pred CCcceeeeccc-cchhHHhhhccc---------ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecc
Confidence 78899999988 578888875322 24667777888888888 99999999 999999999999999
Q ss_pred CC-CcEEEeccccceecCCCCCccc---ccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 043900 781 EE-MMAHVSDFGLARFLPLSPAQTS---SIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVD 849 (953)
Q Consensus 781 ~~-~~~kL~DfG~a~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~ 849 (953)
.+ ...+++|||+...+........ .....|...|++||... ..++.++||||+|.|+.+..+|..++.
T Consensus 257 ~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 257 SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhccccc
Confidence 98 8999999999988865442211 12225788899999864 467889999999999999999877654
No 464
>PLN03150 hypothetical protein; Provisional
Probab=99.28 E-value=4.3e-12 Score=149.68 Aligned_cols=112 Identities=35% Similarity=0.606 Sum_probs=103.9
Q ss_pred ceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCC
Q 043900 421 LIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQ 500 (953)
Q Consensus 421 l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 500 (953)
+..|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCcccccc-ccCceEeccCCcCcccCC
Q 043900 501 NNLSGKIPEFLVGF-QLLENLNLSNNNLEGMVP 532 (953)
Q Consensus 501 N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~p 532 (953)
|+++|.+|..+..+ .++..+++++|+..+..|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC
Confidence 99999999988764 467889999998655444
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=2.4e-11 Score=137.77 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=96.6
Q ss_pred cCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhh----------------------------------H----
Q 043900 631 DGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGA----------------------------------F---- 672 (953)
Q Consensus 631 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------------------------------~---- 672 (953)
..|+. +.||+|++|.||+|+.+++++.||||+.++.-... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 78999999999999999867799999996432110 0
Q ss_pred --HHHHHHHHHHhhcC----CCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHH
Q 043900 673 --KSFIAECNTLKNIR----HRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRL 746 (953)
Q Consensus 673 --~~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~ 746 (953)
-++.+|+..+.+++ +...+.+-.++ ++-....++||||++|+.+.++-.-.... .....+....+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~----~d~st~~VLvmE~i~G~~l~d~~~l~~~g----~d~~~la~~~v~ 270 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVY----WDYCSETVMVMERMYGIPVSDVAALRAAG----TDMKLLAERGVE 270 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceee----cccCCCceEEEeeecCccHHhHHHHHhcC----CCHHHHHHHHHH
Confidence 12445555555552 33333333332 12235678999999999998743110000 001123333334
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC----cEEEeccccceecCC
Q 043900 747 NIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM----MAHVSDFGLARFLPL 798 (953)
Q Consensus 747 ~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~DfG~a~~~~~ 798 (953)
.++.|+. .. |++|+|+||.||+++.++ .++++|||++..++.
T Consensus 271 ~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4444443 35 999999999999999888 999999999987754
No 466
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.23 E-value=1.3e-10 Score=114.11 Aligned_cols=138 Identities=20% Similarity=0.146 Sum_probs=99.8
Q ss_pred cCcccccceeeEEEEEEcC------CCeEEEEEEeeccc----------------------hhhHHHHH----HHHHHHh
Q 043900 636 ANEIGVGSFGSVYKGILDQ------GKTTVAVKVFNLLH----------------------HGAFKSFI----AECNTLK 683 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~------~~~~vavK~~~~~~----------------------~~~~~~~~----~e~~~l~ 683 (953)
...||.|.-+.||.|...+ .+..+|||+++... ....+.+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998764 24689999985210 01122333 8999999
Q ss_pred hcC--CCCeeEEEeeecccccCCCCceeEEEeeccCCchhh-ccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHH-
Q 043900 684 NIR--HRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEE-WLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYL- 759 (953)
Q Consensus 684 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L- 759 (953)
++. .-++.+.+++ ..-++||||+.++.+.. .++ ...++..+...+..+++.+|..+
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lk-----------d~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLK-----------DAKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhh-----------ccccCHHHHHHHHHHHHHHHHHHH
Confidence 984 3566666665 45689999997654321 121 11244456677889999999999
Q ss_pred hhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 760 HHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 760 H~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
|+. |+||||+++.||+++ ++.+.++|||.|....
T Consensus 142 H~~---glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 142 KEC---NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HhC---CeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 787 999999999999997 4679999999998653
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.23 E-value=6.1e-11 Score=131.42 Aligned_cols=170 Identities=22% Similarity=0.193 Sum_probs=128.6
Q ss_pred EEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCC
Q 043900 649 KGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPIT 728 (953)
Q Consensus 649 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 728 (953)
.|..+.++.+|.|..++...........+.++.++.++||+|+++++. +...+..|+|+|.+. .|..+++
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk--- 99 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLK--- 99 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHH---
Confidence 466666777899999886655555667788999999999999999988 445578999999983 5666664
Q ss_pred cCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCccccccc
Q 043900 729 REDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSSIDA 808 (953)
Q Consensus 729 ~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~ 808 (953)
.++...+.-.+.||+.||.|||+.| +++|++|..+.|+|++.|..||++|.++........ .....
T Consensus 100 ----------~l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~ 165 (690)
T KOG1243|consen 100 ----------ELGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSL 165 (690)
T ss_pred ----------HhHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccc
Confidence 3445667778999999999998653 899999999999999999999999998875432111 11111
Q ss_pred ccccccccccccCCCCCCcccchHHHHHHHHHHHhC
Q 043900 809 KGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTR 844 (953)
Q Consensus 809 ~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg 844 (953)
.--..|..|+.+.... -..|.|.|||++||++.|
T Consensus 166 ~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 1223466676543322 346999999999999999
No 468
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.20 E-value=6.3e-12 Score=120.81 Aligned_cols=56 Identities=27% Similarity=0.390 Sum_probs=7.9
Q ss_pred CceeecCCCccCcCCCccCC-CCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCcccc
Q 043900 30 LKVLLLYNNSFNHGIPSEFD-RLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELV 89 (953)
Q Consensus 30 L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~ 89 (953)
+++|+|++|+|+.+ +.++ .+.+|++|||++|+|+ .++ .+..+++|+.|++++|+|+
T Consensus 21 ~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 21 LRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred cccccccccccccc--cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC
Confidence 44444444444431 1232 2344444444444444 222 2333344444444444443
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.20 E-value=8.4e-12 Score=119.94 Aligned_cols=136 Identities=25% Similarity=0.426 Sum_probs=52.7
Q ss_pred cCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCcc-CCCCCcEEeccCccccccCCcccCCccccceeeccccccc
Q 043900 35 LYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANIS-SCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLT 113 (953)
Q Consensus 35 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 113 (953)
|..+.|+. . ..+.+..++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+ .++ .+..+++|++|++++|+|+
T Consensus 4 lt~~~i~~-~-~~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIEQ-I-AQYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred cccccccc-c-cccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC
Confidence 45566664 2 34667778999999999998 554 465 6889999999999998 443 6888999999999999999
Q ss_pred cccCCcc-cCCCcccEEecccccccccC-CccccccccccceecccccccCCCCC----cccccccceEEe
Q 043900 114 GSIPSSL-GNLSSINTLFLTDNNLDGGI-PDTFGWLKNLATLAMAENWLSGTIPS----SIFNISSITAFD 178 (953)
Q Consensus 114 ~~~p~~~-~~L~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~ 178 (953)
.+++.+ ..+++|+.|+|++|+|.... -..+..+++|+.|+|.+|.++ ..+. .+..+++|+.||
T Consensus 78 -~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~-~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 78 -SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC-EKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG-GSTTHHHHHHHH-TT-SEET
T ss_pred -ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc-chhhHHHHHHHHcChhheeC
Confidence 454445 46899999999999997422 256788999999999999998 3444 266889999987
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=3e-12 Score=126.62 Aligned_cols=210 Identities=20% Similarity=0.200 Sum_probs=128.9
Q ss_pred cCccccCCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCcc-ccccCCcccCC
Q 043900 20 ISPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNE-LVGKIPSELGS 98 (953)
Q Consensus 20 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~ 98 (953)
+|-.+.-+++|+.+..|+|.-..+ -.-...=+.|+++...+..++ ..| ++-....+..+.-+.-. .+|..-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~-~~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQ-DVP-SLLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchhhe-eceeecCchhheeeeeccccc-ccc-cccchhhhcCccCCCCCccCCceEEecch
Confidence 333455566677777777655442 111122245666666555554 222 12222233222222111 12222333444
Q ss_pred ccccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEe
Q 043900 99 LSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFD 178 (953)
Q Consensus 99 l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 178 (953)
-.-|++||||+|.|+ .+.++..-+++++.|++|+|.|.. +. .+..|++|+.|+|++|.++ .+...-.++.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 556778888888887 666777777888888888888763 22 3777888888888888877 5555556677788888
Q ss_pred cCCcccccccccccccccccccEEEeeCccccCC-CCCCCcCCCCCcEEEcccccccCcCCC
Q 043900 179 AGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGA-IPPAISNASNLELFQADVNKLTGEVPY 239 (953)
Q Consensus 179 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (953)
|+.|.|...-. + ..+-+|.+|++++|+|... ....+++++-|+.+.|.+|.+.+.+.+
T Consensus 359 La~N~iE~LSG--L-~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 359 LAQNKIETLSG--L-RKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhhhhHhhhhh--h-HhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 88887763221 1 1566777888888887632 245788888899998888888877654
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.18 E-value=1.9e-12 Score=146.25 Aligned_cols=197 Identities=24% Similarity=0.315 Sum_probs=89.0
Q ss_pred CCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEE
Q 043900 50 RLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTL 129 (953)
Q Consensus 50 ~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L 129 (953)
.+..+..++++.|.|. .+-..+..+.+|+.|++.+|.|. .+...+..+.+|++|++++|+|+.. . .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i-~-~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKL-E-GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccc-c-chhhccchhhh
Confidence 4444555555555554 33334555555555555555554 2222245555555555555555522 1 34445555555
Q ss_pred ecccccccccCCccccccccccceecccccccCCCCCc-ccccccceEEecCCcccccccccccccccccccEEEeeCcc
Q 043900 130 FLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSS-IFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQ 208 (953)
Q Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 208 (953)
++++|.|+ . ...|..+++|+.+++++|++....+ . +..+.+++.+++++|.+....... .+..+..+++.+|.
T Consensus 146 ~l~~N~i~-~-~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i~~~~---~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLIS-D-ISGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIREIEGLD---LLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcch-h-ccCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhcccchH---HHHHHHHhhccccc
Confidence 55555554 1 1224445555555555555552222 1 344455555555555554222222 22333333555555
Q ss_pred ccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeeccccc
Q 043900 209 LTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSL 256 (953)
Q Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l 256 (953)
++...+-....+.+|+.+++++|.+...+..+..+..+..+++.+|.+
T Consensus 220 i~~~~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~ 267 (414)
T KOG0531|consen 220 ISKLEGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRI 267 (414)
T ss_pred ceeccCcccchhHHHHHHhcccCccccccccccccccccccchhhccc
Confidence 542221111111125555555555554333333334444444444433
No 472
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.16 E-value=1.1e-10 Score=115.03 Aligned_cols=131 Identities=18% Similarity=0.123 Sum_probs=95.0
Q ss_pred cCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCe-eEEEeeecccccCCCCceeEEEee
Q 043900 636 ANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNL-VKILTACSGVDYQGNDFKALVFEF 714 (953)
Q Consensus 636 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 714 (953)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+..+ .+++.+. ....++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEe
Confidence 357899999999999976 34799999754322 22346789999988865444 3454442 1235799999
Q ss_pred ccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCC--CCCeEeecCCCCCeEecCCCcEEEecccc
Q 043900 715 MQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDC--QPPITHCDLKPSNVLLDEEMMAHVSDFGL 792 (953)
Q Consensus 715 ~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 792 (953)
++|.++.+.- . ....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.
T Consensus 73 i~G~~l~~~~---------------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~ 133 (170)
T cd05151 73 IEGSELLTED---------------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY 133 (170)
T ss_pred cCCCcccccc---------------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence 9998775431 0 11245678999999999982 22369999999999999 66899999998
Q ss_pred cee
Q 043900 793 ARF 795 (953)
Q Consensus 793 a~~ 795 (953)
+..
T Consensus 134 a~~ 136 (170)
T cd05151 134 AGM 136 (170)
T ss_pred ccC
Confidence 863
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.16 E-value=6.8e-12 Score=141.78 Aligned_cols=221 Identities=24% Similarity=0.284 Sum_probs=169.5
Q ss_pred CCccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCcccccee
Q 043900 26 NLSFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHL 105 (953)
Q Consensus 26 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (953)
.+..++.++++.|.|.. +-..+..+++|+.|++.+|+|+ .+...+..+.+|++|+|++|.|+.+. .+..+..|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 56778888899999987 4556889999999999999998 66666889999999999999998443 46777889999
Q ss_pred eccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCCcccc
Q 043900 106 SVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGMNQLQ 185 (953)
Q Consensus 106 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 185 (953)
++++|.|+ .++ .+..+.+|+.+++++|++..+.++....+.+|+.+++++|.+.. ...+..+..+..+++..|.++
T Consensus 146 ~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 146 NLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eeccCcch-hcc-CCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 99999998 444 67779999999999999985544115889999999999999962 344556667777799999998
Q ss_pred cccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcCCCCCCCCccceeeecccccC
Q 043900 186 GVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEVPYLEKPQRLSVFSITENSLG 257 (953)
Q Consensus 186 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~L~~l~l~~n~l~ 257 (953)
..-+.... .+.+|+.+++++|++. ..+..+..+.++..|++..|++.... .+.....+..+....|.+.
T Consensus 222 ~~~~l~~~-~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 222 KLEGLNEL-VMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE-GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eccCcccc-hhHHHHHHhcccCccc-cccccccccccccccchhhccccccc-cccccchHHHhccCcchhc
Confidence 55443321 1113899999999998 44477888999999999999988543 2333444555555555543
No 474
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.15 E-value=8.8e-10 Score=114.90 Aligned_cols=278 Identities=14% Similarity=0.117 Sum_probs=172.5
Q ss_pred cccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhc-CCCCeeEEEeeecc--cccCCCCceeE
Q 043900 634 ASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNI-RHRNLVKILTACSG--VDYQGNDFKAL 710 (953)
Q Consensus 634 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~~~~~~l 710 (953)
...+.+|+|+.+.+|-.-.-.+ .+.|++.........+ .++.|... .||-+..-+.+=-. ..........+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d---~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD---QVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchhhc---hhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 3467899999999997554333 4568876443332222 22333333 56654432222000 00112223567
Q ss_pred EEeeccCC-chhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEec
Q 043900 711 VFEFMQNR-SLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSD 789 (953)
Q Consensus 711 v~e~~~~g-~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 789 (953)
.|+.+++. ....+.....+. ..-....|.-.+++++.++.+.+.||.. |.+-+|+.++|+||++++.|.|+|
T Consensus 88 lmP~v~g~~pI~~~y~p~tRR----qs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRR----QSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred ecccCCCccchhhhcCchhhc----ccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEc
Confidence 78877664 233333222211 2334678999999999999999999999 999999999999999999999998
Q ss_pred cccceecCCCCCccccccccccccccccccc-----CCCCCCcccchHHHHHHHHHHHhC-CCCCCCcccCCc---cHH-
Q 043900 790 FGLARFLPLSPAQTSSIDAKGSIGYIAPEYG-----LGSEVSINGDVYSYGILLLELVTR-KKPVDSMFEGDM---NLH- 859 (953)
Q Consensus 790 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~slG~vl~elltg-~~pf~~~~~~~~---~~~- 859 (953)
-..-... .........+|...|.+||.- .+...+...|-|.+|+++++++.| ++||.+...... .++
T Consensus 161 sDsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 161 SDSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred ccceeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 6654443 222233345689999999963 344567889999999999999996 999987432211 111
Q ss_pred HHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCC--CCCCCCHHHHHHHHHHHH
Q 043900 860 NFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMES--PGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPt~~evl~~L~~i~ 937 (953)
..+...+.. .. + ......+..+..-..-.++.+..+..+|+... |.-|||++..+..|.+++
T Consensus 238 ~Ia~g~f~y------------a~-~---~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 238 DIAHGRFAY------------AS-D---QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred hhhcceeee------------ch-h---ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 111111000 00 0 00001111111222344667888888998653 458999999999999998
Q ss_pred HHhccc
Q 043900 938 NILLGH 943 (953)
Q Consensus 938 ~~~~~~ 943 (953)
+.+..+
T Consensus 302 ~~L~~C 307 (637)
T COG4248 302 QQLKKC 307 (637)
T ss_pred Hhhhhh
Confidence 877655
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=4.7e-12 Score=125.20 Aligned_cols=133 Identities=23% Similarity=0.254 Sum_probs=77.0
Q ss_pred cCCCCCCCcEEeCCCCccccccCcCccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcc
Q 043900 47 EFDRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSI 126 (953)
Q Consensus 47 ~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L 126 (953)
.....+.|++||||+|.|+ .+..+..-++.++.|++++|.|.. + +.+..|++|+.||||+|.++ .+.++=-.|-+.
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 3444556666666666666 555555556666666666666652 2 22566666666666666665 444454555666
Q ss_pred cEEecccccccccCCccccccccccceecccccccCCC-CCcccccccceEEecCCcccc
Q 043900 127 NTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTI-PSSIFNISSITAFDAGMNQLQ 185 (953)
Q Consensus 127 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~ 185 (953)
++|.|++|.|. .-.+++.|-+|.+|++++|+|.... -..+++++.|+++.|.+|.+.
T Consensus 355 KtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 355 KTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 66666666664 1223555566666666666665211 234566666666666666665
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=7.1e-12 Score=130.82 Aligned_cols=162 Identities=18% Similarity=0.137 Sum_probs=80.8
Q ss_pred ccccCCccCceeecCCCccCcCCC--ccCCCCCCCcEEeCCCCcccccc--CcCccCCCCCcEEeccCccccccCCcc-c
Q 043900 22 PHVGNLSFLKVLLLYNNSFNHGIP--SEFDRLQRLQVLALNNNSIGGEI--PANISSCSNLIQIRLFYNELVGKIPSE-L 96 (953)
Q Consensus 22 ~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~~~~--p~~~~~l~~L~~L~L~~n~l~~~~~~~-~ 96 (953)
.-=.+++.|++..|.++.... .+ .....|++++.||||+|-+..-. -.-...+++|+.|+|+.|++..-..+. -
T Consensus 115 akQsn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~ 193 (505)
T KOG3207|consen 115 AKQSNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTT 193 (505)
T ss_pred HHhhhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccch
Confidence 333456666677777666664 22 24455666666666666655211 122345666666666666664111111 1
Q ss_pred CCccccceeecccccccccc-CCcccCCCcccEEecccccccccCCccccccccccceecccccccCCCC--Cccccccc
Q 043900 97 GSLSKIEHLSVSVNNLTGSI-PSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIP--SSIFNISS 173 (953)
Q Consensus 97 ~~l~~L~~L~Ls~N~l~~~~-p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~ 173 (953)
..+++|+.|.|+.|.++... -..+..+++|+.|+|..|..-.+......-+..|++|+|++|.+- ..+ ...+.++.
T Consensus 194 ~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~ 272 (505)
T KOG3207|consen 194 LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPG 272 (505)
T ss_pred hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccc
Confidence 24455555566555554211 111234455555566555322233334444555555555555554 222 23444555
Q ss_pred ceEEecCCcccc
Q 043900 174 ITAFDAGMNQLQ 185 (953)
Q Consensus 174 L~~L~L~~N~l~ 185 (953)
|+.|+++.+.|.
T Consensus 273 L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 273 LNQLNLSSTGIA 284 (505)
T ss_pred hhhhhccccCcc
Confidence 555555555554
No 477
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.06 E-value=2.8e-12 Score=130.33 Aligned_cols=243 Identities=18% Similarity=0.239 Sum_probs=121.7
Q ss_pred CcEEEEEeCCCeeee----ecCccccCCccCceeecCCCcc---CcCCCc-------cCCCCCCCcEEeCCCCccccccC
Q 043900 4 QRVKILNLTSLKLAG----SISPHVGNLSFLKVLLLYNNSF---NHGIPS-------EFDRLQRLQVLALNNNSIGGEIP 69 (953)
Q Consensus 4 ~~~~~l~l~~~~~~~----~~~~~~~~l~~L~~L~L~~n~l---~~~~~~-------~~~~l~~L~~L~L~~n~i~~~~p 69 (953)
..+++|+|+++.+.. .|.+.+.+.++|+.-++|+=.. ...+|. ++...++|++||||+|.|....+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 457777777776642 3455566666777777765321 111222 34555677777777777764444
Q ss_pred cC----ccCCCCCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEeccccccccc----CC
Q 043900 70 AN----ISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGG----IP 141 (953)
Q Consensus 70 ~~----~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~----~~ 141 (953)
.. +.++.+|++|+|.+|.+.-.--..++. -|..|. .|+. .+.-++|+++...+|++... ..
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK-------AASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc-------cCCCcceEEEEeeccccccccHHHHH
Confidence 43 345667777777777765111111110 011111 1111 11224555566665555411 12
Q ss_pred ccccccccccceecccccccCC----CCCcccccccceEEecCCccccccccc---ccccccccccEEEeeCccccCCCC
Q 043900 142 DTFGWLKNLATLAMAENWLSGT----IPSSIFNISSITAFDAGMNQLQGVIPL---DFGFTLQNLQFFSVFENQLTGAIP 214 (953)
Q Consensus 142 ~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~ 214 (953)
..|...+.|+.+.+..|.|... +-..+..+++|+.|||+.|-++..-.. ...+.+++|+.|++++|.+.....
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 2345555566666666555411 112345556666666666655422111 111244556666666666654333
Q ss_pred CCC-----cCCCCCcEEEcccccccCcC-----CCCCCCCccceeeecccccC
Q 043900 215 PAI-----SNASNLELFQADVNKLTGEV-----PYLEKPQRLSVFSITENSLG 257 (953)
Q Consensus 215 ~~~-----~~l~~L~~L~L~~N~l~~~~-----~~l~~~~~L~~l~l~~n~l~ 257 (953)
.+| ...++|+.|.+.+|.++..- -.....+.|..|++++|.++
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 322 23556666666666665321 11233466666666666664
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=3.4e-11 Score=125.80 Aligned_cols=214 Identities=17% Similarity=0.124 Sum_probs=135.2
Q ss_pred CccccceeeccccccccccC--CcccCCCcccEEecccccccccC--CccccccccccceecccccccCCCCCc-ccccc
Q 043900 98 SLSKIEHLSVSVNNLTGSIP--SSLGNLSSINTLFLTDNNLDGGI--PDTFGWLKNLATLAMAENWLSGTIPSS-IFNIS 172 (953)
Q Consensus 98 ~l~~L~~L~Ls~N~l~~~~p--~~~~~L~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~ 172 (953)
++++|+...|.+.... .++ +....|++++.||||.|-+.... -.....|++|+.|+|+.|++.....+. -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 5667777777777765 333 25567777888888887765322 233456788888888888876322222 12566
Q ss_pred cceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCcC--CCCCCCCccceee
Q 043900 173 SITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGEV--PYLEKPQRLSVFS 250 (953)
Q Consensus 173 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~l~~~~~L~~l~ 250 (953)
.|+.|.|+.|.++...-.++...+|+|..|+|..|............+..|++|||++|.+-... +....++.|..++
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 78888888888874444444457788888888888543345555666778888888888877654 4456666666666
Q ss_pred ecccccCCCCCCcccccccccccccccEEeccCCcccccCChhhhhccccCcEEEcccCccccc-CCccccCCCCCCEEE
Q 043900 251 ITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPACISNLSTTLEMLLLDNNKIFGN-IPAAIGKFVNLQRLE 329 (953)
Q Consensus 251 l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~~~~~~~~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~ 329 (953)
++.+.+.+........++. ....++|++|++..|+|..- .-..+..+.+|+.|.
T Consensus 278 ls~tgi~si~~~d~~s~~k-------------------------t~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDK-------------------------THTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred ccccCcchhcCCCccchhh-------------------------hcccccceeeecccCccccccccchhhccchhhhhh
Confidence 6666665543222211111 12225788888888888421 122345566778888
Q ss_pred eecCcccc
Q 043900 330 MWNNRLSG 337 (953)
Q Consensus 330 L~~N~i~~ 337 (953)
...|.+..
T Consensus 333 ~~~n~ln~ 340 (505)
T KOG3207|consen 333 ITLNYLNK 340 (505)
T ss_pred cccccccc
Confidence 88888873
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=1.7e-10 Score=127.22 Aligned_cols=251 Identities=18% Similarity=0.131 Sum_probs=171.5
Q ss_pred hhcCCcccCcccccceeeEEEEEEc-CCCeEEEEEEeeccchhh--HHHHHHHHHHHhhc-CCCCeeEEEeeecccccCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILD-QGKTTVAVKVFNLLHHGA--FKSFIAECNTLKNI-RHRNLVKILTACSGVDYQG 704 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 704 (953)
...+|..+..||.|.|+.||....+ .++..|++|......... ...-..|+.+...+ .|.++++.... |..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~ 337 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQ 337 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----ccc
Confidence 3456888899999999999998866 666789999875332221 12223455555555 58888776655 444
Q ss_pred CCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCC-C
Q 043900 705 NDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEE-M 783 (953)
Q Consensus 705 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~ 783 (953)
....++--||+++++...... ....+++..++++..|++.++.++|+. .++|+|+||+||++..+ +
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~----------~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSV----------TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGF 404 (524)
T ss_pred cccccCchhhhcCcchhhhhH----------HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchh
Confidence 567779999999998877662 123567778899999999999999998 99999999999999876 7
Q ss_pred cEEEeccccceecCCCCCccccccccccccc-ccccccCCCCCCcccchHHHHHHHHHHHhCCCCCCCcccCCccHHHHH
Q 043900 784 MAHVSDFGLARFLPLSPAQTSSIDAKGSIGY-IAPEYGLGSEVSINGDVYSYGILLLELVTRKKPVDSMFEGDMNLHNFA 862 (953)
Q Consensus 784 ~~kL~DfG~a~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDv~slG~vl~elltg~~pf~~~~~~~~~~~~~~ 862 (953)
..+++|||.++.+... .......+..| .+|+......+..++|+||||..+.|..+|...-... . +|
T Consensus 405 ~~~~~~~~~~t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~------~~- 472 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-V------QS- 472 (524)
T ss_pred hhhcccccccccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCccc-c------cc-
Confidence 8999999999743211 11111133334 3566666778889999999999999999987532210 0 00
Q ss_pred HhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHHHHHHHHHHHhhccccCCCCCCCCHHHHHHHHHHHH
Q 043900 863 RMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKIECLVAMVRIGVACSMESPGDRMNMTNVVRQLQSIK 937 (953)
Q Consensus 863 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 937 (953)
..+........ ......+..+.+.+...+|..||.+.++....+-.+
T Consensus 473 --------~~i~~~~~p~~--------------------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 473 --------LTIRSGDTPNL--------------------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --------eeeecccccCC--------------------CchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 00000000000 011244667777888899999999988876655443
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.97 E-value=5.4e-09 Score=108.10 Aligned_cols=145 Identities=19% Similarity=0.203 Sum_probs=107.4
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccch-hhHHHHHHHHHHHhhcCC--CCeeEEEeeecccccCCCCceeEEEe
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHH-GAFKSFIAECNTLKNIRH--RNLVKILTACSGVDYQGNDFKALVFE 713 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 713 (953)
+.|+.|.++.||+++..+ ++.+++|+...... .....+.+|+++++.+.+ ..+.+++.++.... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 568999999999999865 34799999754322 134578899999999965 34566777643221 1135689999
Q ss_pred eccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhC-------------------------------
Q 043900 714 FMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHD------------------------------- 762 (953)
Q Consensus 714 ~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------- 762 (953)
|++|.++.+.+.. ..++..+...++.++++++.+||+.
T Consensus 81 ~i~G~~l~~~~~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (223)
T cd05154 81 RVDGRVLRDRLLR-----------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDAS 149 (223)
T ss_pred EeCCEecCCCCCC-----------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhh
Confidence 9999888876521 1356677778888888888888842
Q ss_pred ----------------------CCCCeEeecCCCCCeEecC--CCcEEEecccccee
Q 043900 763 ----------------------CQPPITHCDLKPSNVLLDE--EMMAHVSDFGLARF 795 (953)
Q Consensus 763 ----------------------~~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~ 795 (953)
....++|+|++|.||+++. ++.+.++||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 150 RTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1246899999999999998 66789999998864
No 481
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.97 E-value=1.2e-08 Score=109.64 Aligned_cols=182 Identities=15% Similarity=0.138 Sum_probs=138.8
Q ss_pred ceeeEEEEEEcCCCeEEEEEEeeccchhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCCCceeEEEeeccC-Cchh
Q 043900 643 SFGSVYKGILDQGKTTVAVKVFNLLHHGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGNDFKALVFEFMQN-RSLE 721 (953)
Q Consensus 643 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~ 721 (953)
-..+.|++...-++..|++|+++............-+++++++.|+|+|++.+++....+ ++...++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 446889999988888999999953333333344566889999999999999998764433 34678999999987 6777
Q ss_pred hccccCCcCC-----cccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceec
Q 043900 722 EWLHPITRED-----KTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFL 796 (953)
Q Consensus 722 ~~l~~~~~~~-----~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 796 (953)
++-....... .....+...++..+|.++.|+..||.++|+. |+.-+-+.|.+|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7654333322 2234456788999999999999999999999 9999999999999999999999999888776
Q ss_pred CCCCCcccccccccccccccccccCCCCCCcccchHHHHHHHHHHHhCCCC
Q 043900 797 PLSPAQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGILLLELVTRKKP 847 (953)
Q Consensus 797 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~vl~elltg~~p 847 (953)
..++.. -+.+ -.+-|.=.||.+++.|.||..-
T Consensus 444 ~~d~~~----------------~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPTE----------------PLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCCc----------------chhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 544311 1111 1356899999999999999654
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.94 E-value=5.3e-10 Score=134.46 Aligned_cols=201 Identities=21% Similarity=0.256 Sum_probs=106.1
Q ss_pred ccCceeecCCCccCcCCCccCCCCCCCcEEeCCCCc--cccccCcCccCCCCCcEEeccCccccccCCcccCCcccccee
Q 043900 28 SFLKVLLLYNNSFNHGIPSEFDRLQRLQVLALNNNS--IGGEIPANISSCSNLIQIRLFYNELVGKIPSELGSLSKIEHL 105 (953)
Q Consensus 28 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~--i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (953)
...+...+-+|.+.. ++.+... ++|++|-+..|. +....++.|..++.|+.|||++|.=.+.+|+.+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~~-~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEH-IAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchhh-ccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 455666666666654 3333222 256666666664 442333335556666666666665555666666666666666
Q ss_pred eccccccccccCCcccCCCcccEEecccccccccCCccccccccccceeccccccc--CCCCCcccccccceEEecCCcc
Q 043900 106 SVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWLS--GTIPSSIFNISSITAFDAGMNQ 183 (953)
Q Consensus 106 ~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~ 183 (953)
+|++..++ .+|..+++|.+|.+|++..+.-...+|.....|.+|++|.+..-... ...-+.+.++.+|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 66666666 56666666666666666666544444555556666666666554321 1112223334444444332222
Q ss_pred ccccccccccccccccc----EEEeeCccccCCCCCCCcCCCCCcEEEcccccccC
Q 043900 184 LQGVIPLDFGFTLQNLQ----FFSVFENQLTGAIPPAISNASNLELFQADVNKLTG 235 (953)
Q Consensus 184 l~~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (953)
.. +-..+. .+..|. .+.+.++... ..+..+..+.+|+.|.+.+.....
T Consensus 680 ~~--~~e~l~-~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 680 VL--LLEDLL-GMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred hH--hHhhhh-hhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCch
Confidence 10 001111 222222 3333333332 456677788888888888777753
No 483
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1e-08 Score=96.46 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=94.2
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEee--ccc-hh-----hHHHHHHHHHHHhhcCC--CCeeEEEeeecccccCCCC
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFN--LLH-HG-----AFKSFIAECNTLKNIRH--RNLVKILTACSGVDYQGND 706 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~--~~~-~~-----~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 706 (953)
..+++|+-+.+|.+.+.+. ++++|.=. ... +. ...+-.+|+.++.+++- -++..++++ +.+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~--~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGL--PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeeccCc--ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 4588999999999988654 36666431 111 11 12456789999988853 333444444 235
Q ss_pred ceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEE
Q 043900 707 FKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAH 786 (953)
Q Consensus 707 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 786 (953)
...|+|||++|..|.+++... ...++..+-.-+.-||.. ||+|+|+.++||++..+. +.
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-----------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~ 131 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-----------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IY 131 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-----------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EE
Confidence 678999999999999888421 245667777778889999 999999999999997765 99
Q ss_pred Eecccccee
Q 043900 787 VSDFGLARF 795 (953)
Q Consensus 787 L~DfG~a~~ 795 (953)
++|||++.+
T Consensus 132 ~IDfGLg~~ 140 (204)
T COG3642 132 FIDFGLGEF 140 (204)
T ss_pred EEECCcccc
Confidence 999999974
No 484
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.90 E-value=1.3e-08 Score=99.82 Aligned_cols=125 Identities=23% Similarity=0.253 Sum_probs=82.4
Q ss_pred eEEEEEEcCCCeEEEEEEeeccc--------------h------------hhHHHHHHHHHHHhhcCCC--CeeEEEeee
Q 043900 646 SVYKGILDQGKTTVAVKVFNLLH--------------H------------GAFKSFIAECNTLKNIRHR--NLVKILTAC 697 (953)
Q Consensus 646 ~Vy~~~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~e~~~l~~l~h~--niv~~~~~~ 697 (953)
.||.|...++. .||+|+.+... . .......+|++.|.++..- ++.+.+++
T Consensus 1 ~Vy~~~~~~~~-~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDPDGE-EVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEECTTE-EEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECCCCC-EEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 38999987764 89999985210 0 0123467899999999654 56777766
Q ss_pred cccccCCCCceeEEEeecc--CCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHH-HhhCCCCCeEeecCCC
Q 043900 698 SGVDYQGNDFKALVFEFMQ--NRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSY-LHHDCQPPITHCDLKP 774 (953)
Q Consensus 698 ~~~~~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlkp 774 (953)
..-++||||++ |..+..+... .++......++.+++..+.. +|.. |++|||+.+
T Consensus 79 --------~~~~ivME~I~~~G~~~~~l~~~------------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~ 135 (188)
T PF01163_consen 79 --------NRNVIVMEYIGEDGVPLPRLKDV------------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSE 135 (188)
T ss_dssp --------ETTEEEEE--EETTEEGGCHHHC------------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-ST
T ss_pred --------eCCEEEEEecCCCccchhhHHhc------------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCCh
Confidence 34579999998 5555443321 11133456677888886665 4677 999999999
Q ss_pred CCeEecCCCcEEEeccccceec
Q 043900 775 SNVLLDEEMMAHVSDFGLARFL 796 (953)
Q Consensus 775 ~NIll~~~~~~kL~DfG~a~~~ 796 (953)
.||+++++ .+.++|||.+...
T Consensus 136 ~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 136 YNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp TSEEEETT-CEEE--GTTEEET
T ss_pred hhEEeecc-eEEEEecCcceec
Confidence 99999888 8999999999764
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.88 E-value=5.3e-10 Score=129.29 Aligned_cols=205 Identities=23% Similarity=0.288 Sum_probs=143.1
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhhcCCCCeeEEEeeecccccCCC
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH---HGAFKSFIAECNTLKNIRHRNLVKILTACSGVDYQGN 705 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 705 (953)
..+.+.+.+-+-+|+++.++.+.-...+...+.|+..... ....+....+-.+.-..++|-+++.... +...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 4566778888999999999988877666455555543211 1112222222222222344555544322 3345
Q ss_pred CceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcE
Q 043900 706 DFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMA 785 (953)
Q Consensus 706 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 785 (953)
...++|++|+.+++|...++.... .+..-.......+..+.+|||.. .+.|+|++|.|++...++..
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~----------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGC----------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCC----------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCc
Confidence 678899999999999999874442 23333344556678899999997 79999999999999999999
Q ss_pred EEeccccceecCCC---------------------C--------CcccccccccccccccccccCCCCCCcccchHHHHH
Q 043900 786 HVSDFGLARFLPLS---------------------P--------AQTSSIDAKGSIGYIAPEYGLGSEVSINGDVYSYGI 836 (953)
Q Consensus 786 kL~DfG~a~~~~~~---------------------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slG~ 836 (953)
+++|||.....+.- . .........||+.|.|||...+......+|.|+.|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 99999844322110 0 001123345899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCc
Q 043900 837 LLLELVTRKKPVDSM 851 (953)
Q Consensus 837 vl~elltg~~pf~~~ 851 (953)
+++|.++|.+||...
T Consensus 1024 ~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAE 1038 (1205)
T ss_pred hhhhhhcCCCCCCCc
Confidence 999999999999753
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.3e-09 Score=86.07 Aligned_cols=59 Identities=36% Similarity=0.493 Sum_probs=27.8
Q ss_pred CCcEEeccCccccccCCcccCCccccceeeccccccccccCCcccCCCcccEEeccccc
Q 043900 77 NLIQIRLFYNELVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNN 135 (953)
Q Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~ 135 (953)
+|++|++++|+|+...++.|.++++|++|++++|+++...|++|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444444444444444444444444444
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=2.5e-09 Score=84.41 Aligned_cols=60 Identities=42% Similarity=0.542 Sum_probs=38.8
Q ss_pred ccceeeccccccccccCCcccCCCcccEEecccccccccCCccccccccccceecccccc
Q 043900 101 KIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPDTFGWLKNLATLAMAENWL 160 (953)
Q Consensus 101 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (953)
+|++|++++|+|+...+++|.++++|++|++++|+|+.+.++.|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 566666666666644445666666666666666666666666666666666666666654
No 488
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.86 E-value=1.9e-10 Score=117.20 Aligned_cols=250 Identities=18% Similarity=0.214 Sum_probs=130.9
Q ss_pred ccCCccccceeeccccccccc----cCCcccCCCcccEEecccccc---cccCCc-------cccccccccceecccccc
Q 043900 95 ELGSLSKIEHLSVSVNNLTGS----IPSSLGNLSSINTLFLTDNNL---DGGIPD-------TFGWLKNLATLAMAENWL 160 (953)
Q Consensus 95 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~L~~L~~L~L~~N~l---~~~~~~-------~~~~l~~L~~L~L~~N~l 160 (953)
.+..+..+++++||+|.+... +...+.+.++|+..++++--- ...+|+ ++.+.++|++|+||.|-+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 345667788888888887532 334566677888888776432 223333 344556777777777776
Q ss_pred cCCCCCc----ccccccceEEecCCcccccccccccccccccccEEEeeCccccCCCCCCCcCCCCCcEEEcccccccCc
Q 043900 161 SGTIPSS----IFNISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLTGAIPPAISNASNLELFQADVNKLTGE 236 (953)
Q Consensus 161 ~~~~p~~----l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (953)
....+.. +..+.+|++|.|.+|.+...-...+...|..|. .......-++|+.+...+|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~------------~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELA------------VNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHH------------HHhccCCCcceEEEEeeccccccc
Confidence 5333332 234556666666666655222222211111111 111223445677777777777644
Q ss_pred CC-----CCCCCCccceeeecccccCCCCCCcccccccccccccccEEeccCCcccccCCh----hhhhccccCcEEEcc
Q 043900 237 VP-----YLEKPQRLSVFSITENSLGSRGHSNLNFLCSLTNSTRLNRLLINANNFGGLLPA----CISNLSTTLEMLLLD 307 (953)
Q Consensus 237 ~~-----~l~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~L~~L~l~~n~~~~~~p~----~~~~~~~~L~~L~L~ 307 (953)
.. .+...+.|+.+.+..|.|...+. ......+..++.|+.|++.+|.|+..... .+..+ ++|+.|+++
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~-~~L~El~l~ 249 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSW-PHLRELNLG 249 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhccc-chheeeccc
Confidence 32 13344566777777777665543 12233445556666666666666543222 22233 245566666
Q ss_pred cCcccccCCccc-----cCCCCCCEEEeecCcccc----cCCcCccCCCCCCeEEeccccc
Q 043900 308 NNKIFGNIPAAI-----GKFVNLQRLEMWNNRLSG----TIPPAIGELQNLRELRLQRNKF 359 (953)
Q Consensus 308 ~N~i~~~~~~~~-----~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l 359 (953)
+|.+......+| ...++|+.|.|.+|.|+. .+.......+.|..|+|++|++
T Consensus 250 dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 250 DCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 666544333322 124556666666666651 1222333455666666666665
No 489
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.83 E-value=2.5e-08 Score=93.14 Aligned_cols=141 Identities=19% Similarity=0.242 Sum_probs=97.7
Q ss_pred ccCcccccceeeEEEEEEcCCCeEEEEEEe-ecc--c-----hhhHHHHHHHHHHHhhcCCCCe--eEEEeeecccccCC
Q 043900 635 SANEIGVGSFGSVYKGILDQGKTTVAVKVF-NLL--H-----HGAFKSFIAECNTLKNIRHRNL--VKILTACSGVDYQG 704 (953)
Q Consensus 635 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~-~~~--~-----~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~ 704 (953)
....+-+|+-+.|+++.+.+. .++||.- ... . .-..++..+|++.+.+++--.| .+++.+ +
T Consensus 11 ~l~likQGAEArv~~~~~~Ge--~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-------D 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGE--AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-------D 81 (229)
T ss_pred cceeeeccceeeEeeeccCCc--eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-------e
Confidence 567899999999999999764 4556542 111 1 1124567789999988853222 222211 2
Q ss_pred CCceeEEEeeccC-CchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCC
Q 043900 705 NDFKALVFEFMQN-RSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEM 783 (953)
Q Consensus 705 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 783 (953)
...-.++|||++| .++.+++...... .........++.+|-+.+.-||.. +|+||||..+||++..++
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~--------~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~ 150 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTMED--------ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDG 150 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHccC--------cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCC
Confidence 2445799999977 4788888543222 122223367889999999999999 999999999999997655
Q ss_pred ---cEEEecccccee
Q 043900 784 ---MAHVSDFGLARF 795 (953)
Q Consensus 784 ---~~kL~DfG~a~~ 795 (953)
.+.++|||++..
T Consensus 151 ~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 151 NQITPILIDFGLSSV 165 (229)
T ss_pred CcCceEEEeecchhc
Confidence 468999999964
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=2.8e-08 Score=99.37 Aligned_cols=135 Identities=24% Similarity=0.211 Sum_probs=98.9
Q ss_pred CcccCcccccceeeEEEEEEcCCCeEEEEEEeeccc----------------------hhhHHHHHHHHHHHhhcCCC--
Q 043900 633 FASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLH----------------------HGAFKSFIAECNTLKNIRHR-- 688 (953)
Q Consensus 633 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~-- 688 (953)
+.++..||-|.-+.||.|.+..+. ++|||.-+... ........+|.++|.++...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~-~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGR-KVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECCCCC-EEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999998765 89999753110 01234567899999999654
Q ss_pred CeeEEEeeecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 043900 689 NLVKILTACSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPIT 768 (953)
Q Consensus 689 niv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 768 (953)
.|.+.+++ +.-++||||++|--|...- ++....-.++..|+.-+.-+-.. |||
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r---------------~~~en~~~il~~il~~~~~~~~~---GiV 224 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR---------------LDVENPDEILDKILEEVRKAYRR---GIV 224 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc---------------CcccCHHHHHHHHHHHHHHHHHc---Ccc
Confidence 77777766 5668999999886554432 12223334455555555555556 999
Q ss_pred eecCCCCCeEecCCCcEEEecccccee
Q 043900 769 HCDLKPSNVLLDEEMMAHVSDFGLARF 795 (953)
Q Consensus 769 H~Dlkp~NIll~~~~~~kL~DfG~a~~ 795 (953)
|+|+++-||+++++|.+.++||--+..
T Consensus 225 HGDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 225 HGDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred ccCCchheEEEecCCCEEEEeCccccc
Confidence 999999999999999999999977754
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.76 E-value=4.6e-09 Score=126.51 Aligned_cols=127 Identities=24% Similarity=0.319 Sum_probs=67.9
Q ss_pred CCCcEEeCCCCccccccCcCccCCCCCcEEeccCcc--ccccCCcccCCccccceeeccccccccccCCcccCCCcccEE
Q 043900 52 QRLQVLALNNNSIGGEIPANISSCSNLIQIRLFYNE--LVGKIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTL 129 (953)
Q Consensus 52 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L 129 (953)
...+...+-+|.+. .++.+..+- +|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCCC-ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45555555555555 444433322 45555555554 332222334556666666666554333556666666666666
Q ss_pred ecccccccccCCccccccccccceecccccccCCCCCcccccccceEEecCC
Q 043900 130 FLTDNNLDGGIPDTFGWLKNLATLAMAENWLSGTIPSSIFNISSITAFDAGM 181 (953)
Q Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 181 (953)
+|++..++ .+|.++..|++|.+|++..+.-...+|..+..+++|++|.+-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 66666665 5555666666666666665554334444444555666555543
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.73 E-value=1.5e-07 Score=98.27 Aligned_cols=146 Identities=13% Similarity=0.032 Sum_probs=98.4
Q ss_pred CcccccceeeEEEEEEcCCCeEEEEEEeeccchh-----------hHHHHHHHHHHHhhcCCC--CeeEEEeeecccccC
Q 043900 637 NEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHG-----------AFKSFIAECNTLKNIRHR--NLVKILTACSGVDYQ 703 (953)
Q Consensus 637 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~ 703 (953)
+.+-+.....|++++.. ++.|.||........ ....+.+|...+.++... .+.+.+++.......
T Consensus 28 e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 44554455557777663 347999977432211 111477888888888422 233444443221111
Q ss_pred CCCceeEEEeeccCC-chhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecC-
Q 043900 704 GNDFKALVFEFMQNR-SLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDE- 781 (953)
Q Consensus 704 ~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 781 (953)
....-++|||++++. +|.+++.... ....+...+..++.+++..+.-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~--------~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~ 174 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA--------TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLP 174 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc--------ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEecc
Confidence 124568999999885 8988874211 11345667789999999999999999 9999999999999975
Q ss_pred ------CCcEEEecccccee
Q 043900 782 ------EMMAHVSDFGLARF 795 (953)
Q Consensus 782 ------~~~~kL~DfG~a~~ 795 (953)
+..+.++||+.+..
T Consensus 175 ~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 175 FPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred ccCCCCCceEEEEECCcccc
Confidence 46899999998863
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.62 E-value=4.2e-10 Score=124.32 Aligned_cols=180 Identities=24% Similarity=0.295 Sum_probs=94.0
Q ss_pred CccccCCccCceeecCCCccCcCCCccCCCCC-CCcEEeCCCCccc---cccCcCccCC------CCCcEEeccCccccc
Q 043900 21 SPHVGNLSFLKVLLLYNNSFNHGIPSEFDRLQ-RLQVLALNNNSIG---GEIPANISSC------SNLIQIRLFYNELVG 90 (953)
Q Consensus 21 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~---~~~p~~~~~l------~~L~~L~L~~n~l~~ 90 (953)
|-.|..+++|++|.|.++.|.. ...+..+. +|++| +-+|+++ ..+....+.. ..|...+.++|.++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 4467777788888888887765 22222221 23333 2233332 0111111111 13455556666665
Q ss_pred cCCcccCCccccceeeccccccccccCCcccCCCcccEEecccccccccCCc-cccccccccceecccccccCCCCCccc
Q 043900 91 KIPSELGSLSKIEHLSVSVNNLTGSIPSSLGNLSSINTLFLTDNNLDGGIPD-TFGWLKNLATLAMAENWLSGTIPSSIF 169 (953)
Q Consensus 91 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~ 169 (953)
.+..++.-++.|+.|+|++|++. ... .+..|++|+.|||+.|.+. .+|. ...++. |..|.|++|.++. + ..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~t-L-~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTT-L-RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHh-h-hhHH
Confidence 45555556666666666666665 222 5566666666666666665 3332 222333 6666666666652 1 2345
Q ss_pred ccccceEEecCCcccccccccccccccccccEEEeeCcccc
Q 043900 170 NISSITAFDAGMNQLQGVIPLDFGFTLQNLQFFSVFENQLT 210 (953)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (953)
++.+|+.||+++|-|.+.--..+.+.|..|+.|+|.+|.+-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 56666666666666654333333335566666666666664
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.60 E-value=1.4e-09 Score=95.71 Aligned_cols=102 Identities=25% Similarity=0.401 Sum_probs=45.9
Q ss_pred EEEeCCCeeeeecCcc---ccCCccCceeecCCCccCcCCCccC-CCCCCCcEEeCCCCccccccCcCccCCCCCcEEec
Q 043900 8 ILNLTSLKLAGSISPH---VGNLSFLKVLLLYNNSFNHGIPSEF-DRLQRLQVLALNNNSIGGEIPANISSCSNLIQIRL 83 (953)
Q Consensus 8 ~l~l~~~~~~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 83 (953)
.+||++|++. -|++. +....+|+..+|++|.+.. .|..| ..++.++.|+|++|.|+ .+|..+..++.|+.|++
T Consensus 31 ~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 31 FLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 3455555543 33332 2233344444555555554 23233 23334555555555554 44444444444444444
Q ss_pred cCccccccCCcccCCccccceeeccccccc
Q 043900 84 FYNELVGKIPSELGSLSKIEHLSVSVNNLT 113 (953)
Q Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 113 (953)
+.|.+. ..|..+..|.+|-+|+..+|.+.
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 444444 34444444444444444444443
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=1.9e-08 Score=112.43 Aligned_cols=150 Identities=17% Similarity=0.263 Sum_probs=101.6
Q ss_pred HHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCcEEEeccccceecCCCCCcccc-------cccccccccccccccCCC
Q 043900 751 DVACALSYLHHDCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLPLSPAQTSS-------IDAKGSIGYIAPEYGLGS 823 (953)
Q Consensus 751 ~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 823 (953)
+++.|+.|+|.. +++||++|.|++|.++..+..||+.|+++............ .-......|.|||++.+.
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 445899999976 69999999999999999999999999998755432111111 111245679999999998
Q ss_pred CCCcccchHHHHHHHHHHHh-CCCCCCCcccCCccHHHHHHhhCCchhhhhccccccCCchhhhhcccchhhhhhhhhHH
Q 043900 824 EVSINGDVYSYGILLLELVT-RKKPVDSMFEGDMNLHNFARMALPDHVVDIVDSTLLSDDEDLAVHGNQRQRQARINSKI 902 (953)
Q Consensus 824 ~~~~~sDv~slG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 902 (953)
..+.++|+||+|+.+|.+.. |+.-+.. . +............ +.. ......
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a-~-~~~~~~~~~~~~~--------~~~-------------------~~~~s~ 235 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAA-N-GGLLSYSFSRNLL--------NAG-------------------AFGYSN 235 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhc-c-CCcchhhhhhccc--------ccc-------------------cccccc
Confidence 89999999999999999995 4443332 1 1111111110000 000 000112
Q ss_pred HHHHHHHHHhhccccCCCCCCCCHHHHHH
Q 043900 903 ECLVAMVRIGVACSMESPGDRMNMTNVVR 931 (953)
Q Consensus 903 ~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 931 (953)
+.+.++.+=+.+++..++..||++.++..
T Consensus 236 ~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 236 NLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred cCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 45677888888999999999998777654
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=8.9e-07 Score=87.08 Aligned_cols=144 Identities=17% Similarity=0.075 Sum_probs=104.2
Q ss_pred cccccceeeEEEEEEcCCCeEEEEEEeec------cchhhHHHHHHHHHHHhhcC--CCCeeEEEeeecccccCCCCcee
Q 043900 638 EIGVGSFGSVYKGILDQGKTTVAVKVFNL------LHHGAFKSFIAECNTLKNIR--HRNLVKILTACSGVDYQGNDFKA 709 (953)
Q Consensus 638 ~ig~G~~g~Vy~~~~~~~~~~vavK~~~~------~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 709 (953)
--|+||-+.|++....+. .+-+|.-.. ..+-....|.+|+..+.++. .-.+.+.+ ++..........-+
T Consensus 25 N~~rgG~SgV~r~~~~g~--~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~ 101 (216)
T PRK09902 25 NYRRNGMSGVQCVERNGK--KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL 101 (216)
T ss_pred CcCCCCcceEEEEEeCCc--EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence 357799999999887655 577887641 11335678999999999984 22244554 32211122234567
Q ss_pred EEEeeccC-CchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeEecCCCc--EE
Q 043900 710 LVFEFMQN-RSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSNVLLDEEMM--AH 786 (953)
Q Consensus 710 lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~k 786 (953)
||+|-+++ .+|.+++..... .+.+...+..+..++++.++-||+. |+.|+|+.+.||+++.++. ++
T Consensus 102 LVTe~L~g~~~L~~~l~~~~~--------~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~ 170 (216)
T PRK09902 102 LVTEDMAGFISIADWYAQHAV--------SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAG 170 (216)
T ss_pred EEEEeCCCCccHHHHHhcCCc--------CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEE
Confidence 99998864 588888743221 2467778889999999999999999 9999999999999986666 99
Q ss_pred Eecccccee
Q 043900 787 VSDFGLARF 795 (953)
Q Consensus 787 L~DfG~a~~ 795 (953)
++||.-++.
T Consensus 171 lIDlEk~r~ 179 (216)
T PRK09902 171 FLDLEKSRR 179 (216)
T ss_pred EEEhhccch
Confidence 999987763
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.52 E-value=2.9e-09 Score=93.74 Aligned_cols=78 Identities=23% Similarity=0.402 Sum_probs=40.5
Q ss_pred eeccCCcccCCCCccccC-CCccceeeecCCcccccCCCCccCCccccEEEccCccccCCCCccccCCCCCcEEECCCCc
Q 043900 424 LDLSRNQLTGSIPSEVGN-LKNLEVLDVFENKLKGEIPSTLGSCKKLEQLEMQGNFLQGPIPSSLSSLKGLNVLDLSQNN 502 (953)
Q Consensus 424 L~ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 502 (953)
.+|++|.+. .+|..|.. .+.++.|+|++|+|+ .+|.+++.++.|+.|+++.|.|. ..|..+..|.+|..||..+|.
T Consensus 58 i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na 134 (177)
T KOG4579|consen 58 ISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENA 134 (177)
T ss_pred Eecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCc
Confidence 444444444 23333332 234555555555555 45555555555555555555555 445555555555555555555
Q ss_pred cc
Q 043900 503 LS 504 (953)
Q Consensus 503 l~ 504 (953)
+.
T Consensus 135 ~~ 136 (177)
T KOG4579|consen 135 RA 136 (177)
T ss_pred cc
Confidence 54
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=3.6e-09 Score=117.15 Aligned_cols=128 Identities=33% Similarity=0.349 Sum_probs=90.0
Q ss_pred CCcEEEcCCCccCCCCCccccCccccceeeeccCCcccCCCCccccCCCccceeeecCCcccccCCC-CccCCccccEEE
Q 043900 395 TLTIIDLSDNNLTGTIPPQFLGLSWLLIGLDLSRNQLTGSIPSEVGNLKNLEVLDVFENKLKGEIPS-TLGSCKKLEQLE 473 (953)
Q Consensus 395 ~L~~L~L~~N~l~~~~p~~~~~~~~~l~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 473 (953)
.|...+.+.|+++ .. +.-..+.+.++.|||++|+++.. +.+..++.|+.|||+.|.+. .+|. ...++. |..|+
T Consensus 165 ~L~~a~fsyN~L~-~m-D~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LM-DESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hH-HHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 4666677777776 22 22334445566778888887743 26778888899999999888 4543 334454 88999
Q ss_pred ccCccccCCCCccccCCCCCcEEECCCCcccccC-CccccccccCceEeccCCcCccc
Q 043900 474 MQGNFLQGPIPSSLSSLKGLNVLDLSQNNLSGKI-PEFLVGFQLLENLNLSNNNLEGM 530 (953)
Q Consensus 474 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~ 530 (953)
|++|.++.. ..+.+|++|+.|||++|-|.+.- -..++.+..|..|+|.+|++.+-
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 999998843 45788888999999999887532 12356678888999999988643
No 499
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.41 E-value=2.8e-06 Score=83.76 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=92.3
Q ss_pred hhcCCcccCcccccceeeEEEEEEcCCCeEEEEEEeeccchhhHHH---------HHHHHHHHhhcC---CCCeeEEEee
Q 043900 629 ATDGFASANEIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGAFKS---------FIAECNTLKNIR---HRNLVKILTA 696 (953)
Q Consensus 629 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~---h~niv~~~~~ 696 (953)
...+|...+++-......|.+....+ ..+++|..+.......+. ..+++..+.+++ ....+.++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~--~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDG--KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECC--cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 34667777888877777777766654 479999886433322222 223444444442 2333333333
Q ss_pred ecccccCCCCceeEEEeeccCCchhhccccCCcCCcccCCccccCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCC
Q 043900 697 CSGVDYQGNDFKALVFEFMQNRSLEEWLHPITREDKTEEAPRSLNLLQRLNIGIDVACALSYLHHDCQPPITHCDLKPSN 776 (953)
Q Consensus 697 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 776 (953)
+.-..+.-....++||||++|..|.+... ++. .++..+++++.-+|+. |++|+|..|.|
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgN 165 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGN 165 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCc
Confidence 22221222345679999999988877652 222 3556777889999999 99999999999
Q ss_pred eEecCCCcEEEeccccce
Q 043900 777 VLLDEEMMAHVSDFGLAR 794 (953)
Q Consensus 777 Ill~~~~~~kL~DfG~a~ 794 (953)
+++++++ ++++||+..+
T Consensus 166 Flv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 166 FLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred EEEECCc-EEEEECcccc
Confidence 9998655 9999998665
No 500
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.41 E-value=2.5e-06 Score=84.80 Aligned_cols=153 Identities=20% Similarity=0.160 Sum_probs=101.3
Q ss_pred CcCHHHHHHhhcCCcccC---cccccceeeEEEEEEcCCCeEEEEEEeeccchhh-------------------HH----
Q 043900 620 NISYQNLYNATDGFASAN---EIGVGSFGSVYKGILDQGKTTVAVKVFNLLHHGA-------------------FK---- 673 (953)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~---~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------------------~~---- 673 (953)
..+...+....++..+.. .|+.|.-+.||+|...++ ..||||+++...... .+
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~-~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~ 112 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDG-RYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVF 112 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCC-ceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHH
Confidence 344555555555555444 466777789999998554 589999996322110 00
Q ss_pred -HHHHHHHHHhhc--CCCCeeEEEeeecccccCCCCceeEEEeeccCC-chhhccccCCcCCcccCCccccCHHHHHHHH
Q 043900 674 -SFIAECNTLKNI--RHRNLVKILTACSGVDYQGNDFKALVFEFMQNR-SLEEWLHPITREDKTEEAPRSLNLLQRLNIG 749 (953)
Q Consensus 674 -~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~ 749 (953)
=..+|+..|+++ .+-.+.+.+++ ..-.+||||+... .-.-.|+ ...+...+...+.
T Consensus 113 ~W~~kEf~NL~R~~eAGVrvP~Pi~~---------~~nVLvMEfIg~~g~pAP~Lk-----------Dv~~e~~e~~~~~ 172 (268)
T COG1718 113 AWARKEFRNLKRAYEAGVRVPEPIAF---------RNNVLVMEFIGDDGLPAPRLK-----------DVPLELEEAEGLY 172 (268)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceee---------cCCeEEEEeccCCCCCCCCcc-----------cCCcCchhHHHHH
Confidence 124677777777 24555555655 3457999999553 1111111 1123333667788
Q ss_pred HHHHHHHHHHhh-CCCCCeEeecCCCCCeEecCCCcEEEeccccceecC
Q 043900 750 IDVACALSYLHH-DCQPPITHCDLKPSNVLLDEEMMAHVSDFGLARFLP 797 (953)
Q Consensus 750 ~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 797 (953)
.++++.+.-|-. . ++||+||+.=|||+. ++.+.++|||-|....
T Consensus 173 ~~~v~~~~~l~~~a---~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 173 EDVVEYMRRLYKEA---GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHHHHHHHHHHHhc---CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 888888888876 5 999999999999999 8899999999997653
Done!