Your job contains 1 sequence.
>043903
MKLEKLKGNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVA
GLPGDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT
GSFILTSNFTLFLQKGAVILGSQELK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043903
(146 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 306 5.0e-27 1
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 216 4.4e-17 1
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 210 2.0e-16 1
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 207 4.5e-16 1
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 199 3.6e-15 1
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 197 6.7e-15 1
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 195 9.9e-15 1
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 193 1.7e-14 1
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 191 2.8e-14 1
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 190 3.7e-14 1
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 186 1.1e-13 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 171 3.6e-12 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 155 2.0e-10 1
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 306 (112.8 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 71/136 (52%), Positives = 93/136 (68%)
Query: 11 SRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPK 70
+RPS A L+ + T++ ILSLQI+ L L + S + +P TC D + P
Sbjct: 15 TRPSWAFLLLVFTVLAILSLQISSNSFLPLW-IPTSQYD----DPVTCSGFFNHDPF-PN 68
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +VMSI DFG VGDG TS T FR+AVR+++ F +GG QLNVPEG WL+GSF LTSNF
Sbjct: 69 R-IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNF 127
Query: 130 TLFLQKGAVILGSQEL 145
TLFL++GA+ILGS++L
Sbjct: 128 TLFLERGALILGSKDL 143
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 216 (81.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 47/82 (57%), Positives = 56/82 (68%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + L R +SI DFG VGDG T T F+ AV Y+ +F DKGG QL VP G WLTGS
Sbjct: 32 GRRSLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGS 91
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F LTS+ TLFL+ GAVI+ SQ+
Sbjct: 92 FSLTSHLTLFLENGAVIVASQD 113
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 210 (79.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ I DFG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LTS+ TLFL
Sbjct: 43 VKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTLFL 102
Query: 134 QKGAVILGSQE 144
+K AVIL SQ+
Sbjct: 103 EKDAVILASQD 113
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 207 (77.9 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 45/78 (57%), Positives = 54/78 (69%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 33 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 92
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGA IL S +
Sbjct: 93 SHLTLFLEKGATILASPD 110
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 199 (75.1 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 42/75 (56%), Positives = 50/75 (66%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ FR A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 130 TLFLQKGAVILGSQE 144
TLF+Q+GA IL SQ+
Sbjct: 101 TLFIQRGATILASQD 115
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 197 (74.4 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 42/70 (60%), Positives = 49/70 (70%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ +FG VGDG TS T FR AV + F D GG+ L VP G WLTG+F LTS+FTLFL
Sbjct: 69 SLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHFTLFLH 128
Query: 135 KGAVILGSQE 144
+ AVIL SQE
Sbjct: 129 RDAVILASQE 138
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 195 (73.7 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
KGA ILGS
Sbjct: 103 DKGATILGS 111
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 193 (73.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 41/75 (54%), Positives = 51/75 (68%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG VGDG TS T+ F++A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 111
Query: 130 TLFLQKGAVILGSQE 144
TLF+QKGA IL SQ+
Sbjct: 112 TLFIQKGATILASQD 126
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 191 (72.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G VGDG T T+ F+ AV ++ + +GG QL VP G WLTGSF LTS+FTLFL
Sbjct: 46 SITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLH 105
Query: 135 KGAVILGSQEL 145
K A++L +Q+L
Sbjct: 106 KDAILLAAQDL 116
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 190 (71.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 43/80 (53%), Positives = 49/80 (61%)
Query: 69 PK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
PK R VV ++ DFG VGDG T TE F KA+ + KGG QLNVP G WLT F LT
Sbjct: 59 PKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLT 118
Query: 127 SNFTLFLQKGAVILGSQELK 146
S TLFL + A IL Q+ K
Sbjct: 119 SYMTLFLSENAEILALQDEK 138
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 48/106 (45%), Positives = 60/106 (56%)
Query: 44 GFSGAEGALFNPATCVAGLPGDQYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQ 101
G SG G + T + Q +P+ R VV +KDFG VGDG T TE F +AV +
Sbjct: 56 GGSGT-GPVGGKFTIFGKIKPIQPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISIS 114
Query: 102 AFG-DKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
G GG QLNVP G WLT F LTS+ TLFL + + ILG ++ K
Sbjct: 115 KLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLAEDSEILGVEDEK 160
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 171 (65.3 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/90 (47%), Positives = 55/90 (61%)
Query: 56 ATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVP 114
ATC +P L R +SI DFG VGDG T T+ FR A+ +Q +GGT L +P
Sbjct: 26 ATCSGIVP----LRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIP 81
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LT SF LTS+ TL+L KGAVI Q+
Sbjct: 82 PGVYLTESFNLTSHMTLYLAKGAVIRAVQD 111
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 155 (59.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 55 PATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKG-GTQLN 112
P TC +P + R ++SI DFG VGDG T T+ F A+ ++ + GT L
Sbjct: 29 PITCSGIVP----MKHRNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLY 84
Query: 113 VPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
VP G++LT SF LTS+ TL+L GAVI Q+
Sbjct: 85 VPRGVYLTQSFNLTSHMTLYLADGAVIKAVQD 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 146 146 0.00079 103 3 11 22 0.45 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 538 (57 KB)
Total size of DFA: 112 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.06u 0.15s 13.21t Elapsed: 00:00:01
Total cpu time: 13.06u 0.15s 13.21t Elapsed: 00:00:01
Start: Fri May 10 22:34:54 2013 End: Fri May 10 22:34:55 2013