BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043903
(146 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 8 GNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQY 67
G F+RPS A L+ + ++ + QI K V R V G E + A GL +
Sbjct: 13 GGFTRPSWAFLLLVFIVLVVSCFQIGTKTVFP-RWVVLGGGETGISEEAPSCFGLFRE-- 69
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P RKVVMSI+DFG VGDG TS TE FR+A+RY+Q+FG+ GG+QLNVP G W+TGSF LT
Sbjct: 70 VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 129
Query: 127 SNFTLFLQKGAVILGSQELK 146
SNFTLFL++GAVILGSQ+L+
Sbjct: 130 SNFTLFLEEGAVILGSQDLE 149
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 8 GNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQY 67
G F+RPS A L+ + ++ + QI K V R V G E + A GL +
Sbjct: 2 GGFTRPSWAFLLLVFIVLVVSCFQIGTKTVFP-RWVVLGGGETGISEEAPSCFGLFRE-- 58
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P RKVVMSI+DFG VGDG TS TE FR+A+RY+Q+FG+ GG+QLNVP G W+TGSF LT
Sbjct: 59 VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 118
Query: 127 SNFTLFLQKGAVILGSQELK 146
SNFTLFL++GAVILGSQ+L+
Sbjct: 119 SNFTLFLEEGAVILGSQDLE 138
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 8 GNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQY 67
G F+RPS A L+ + ++ + QI K V R V G E + A GL +
Sbjct: 13 GGFTRPSWAFLLLVFIVLVVSCFQIGTKTVFP-RWVVLGGGETGISEEAPSCFGLFRE-- 69
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P RKVVMSI+DFG VGDG TS TE FR+A+RY+Q+FG+ GG+QLNVP G W+TGSF LT
Sbjct: 70 VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 129
Query: 127 SNFTLFLQKGAVILGSQELK 146
SNFTLFL++GAVILGSQ+L+
Sbjct: 130 SNFTLFLEEGAVILGSQDLE 149
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 67/140 (47%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 8 GNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQY 67
G++++PS + L T + ILSLQ + + + L + + +L +P TC +G +
Sbjct: 12 GSYTKPSCSILFLFFTFLTILSLQFSTRSLFPLSILLSQQPQPSLVDPTTC-SGFFNN-- 68
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P RK++ SI DFG VGDG TS T+ F++A+RY+Q F KGG+QLN+P G WLTGSF LT
Sbjct: 69 VPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLT 128
Query: 127 SNFTLFLQKGAVILGSQELK 146
S+FTLFL GAV+LGSQ++K
Sbjct: 129 SDFTLFLHHGAVVLGSQDIK 148
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/150 (52%), Positives = 101/150 (67%), Gaps = 15/150 (10%)
Query: 6 LKGNFSRPSRATLVPIVTLIKILSLQITKK---PVLSLRRV-----GFSGAEGALFNPAT 57
L G +R S + L+ ++T++ +LS+QIT + P+ + R GFSG + +
Sbjct: 7 LMGKLTRLSWSPLILLITVLVLLSIQITTRDFYPICLMSRSSSQPPGFSG------DKES 60
Query: 58 CVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
C G+ LP+R+VV SI DFG VGDG TS TE FRKAVRY+Q F +KGG+QL VP G
Sbjct: 61 CAVFFLGELLLPRREVVRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRG 120
Query: 117 LWLTGSFILTSNFTLFLQKGAVILGSQELK 146
WLTGSF LTSNFTLFL++GAVILGSQ+ K
Sbjct: 121 RWLTGSFNLTSNFTLFLEEGAVILGSQDPK 150
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 71/136 (52%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
Query: 11 SRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPK 70
+RPS A L+ + T + ILSLQI+ + + +P TC D + P
Sbjct: 15 TRPSCAFLLLVFTALAILSLQISSNSFIPIWI-----PTSQYHDPVTCSGFFNHDPF-PN 68
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RKV MSI DFG VGDG TS TE FR+AVR+++ F +GG QLNVP G WL+GSF LTSNF
Sbjct: 69 RKV-MSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNF 127
Query: 130 TLFLQKGAVILGSQEL 145
TLFLQ+GAVILGS++L
Sbjct: 128 TLFLQRGAVILGSKDL 143
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 73/141 (51%), Positives = 92/141 (65%), Gaps = 9/141 (6%)
Query: 8 GNFSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATC-VAGLPGDQ 66
G +RPS A + + TL+ L+L + +PV L SG + + T AG D
Sbjct: 14 GTCTRPSWALIFLLFTLVTFLTLHLPARPVWFL-----SGLQPGPYPTTTPTCAGFFRD- 67
Query: 67 YLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
+P RKVV+SI+DFG VGDG TS TE FR+A+RY+Q F ++GG QLN+P G WLTGSF L
Sbjct: 68 -VPPRKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNL 126
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TSNFTLFL GAVIL SQ+ K
Sbjct: 127 TSNFTLFLHHGAVILASQDPK 147
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 71/136 (52%), Positives = 93/136 (68%), Gaps = 8/136 (5%)
Query: 11 SRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPK 70
+RPS A L+ + T++ ILSLQI+ L L + S + +P TC D + P
Sbjct: 15 TRPSWAFLLLVFTVLAILSLQISSNSFLPLW-IPTSQYD----DPVTCSGFFNHDPF-PN 68
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +VMSI DFG VGDG TS T FR+AVR+++ F +GG QLNVPEG WL+GSF LTSNF
Sbjct: 69 R-IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNF 127
Query: 130 TLFLQKGAVILGSQEL 145
TLFL++GA+ILGS++L
Sbjct: 128 TLFLERGALILGSKDL 143
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 8/138 (5%)
Query: 10 FSRPSRATLVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLP 69
+RPS A L+ + T++ ILSLQI+ L L +P TC D + P
Sbjct: 14 ITRPSWAFLLLVFTVLAILSLQISSNSFLPLWI-----PTSQYDDPVTCSGFFNHDPF-P 67
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
R +VMSI DFG VGDG TS T FR+AVR+++ F +GG QLNVPEG WL+GSF LTSN
Sbjct: 68 NR-IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSN 126
Query: 129 FTLFLQKGAVILGSQELK 146
FTLFL++GA+ILGS++L
Sbjct: 127 FTLFLERGALILGSKDLD 144
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 42 RVGFSGAE--GALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVR 98
++ FS G + T G G+ LP+RK VMSI++FG VGDG TS TE FRKA+R
Sbjct: 2 KIAFSSTSKTGVSADTRTSCVGFFGE--LPERKAVMSIREFGGVGDGKTSNTETFRKAIR 59
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
Y+Q FG+ GG QLNVP+G W+TGSF LTSNFTLFL++GAVILGSQ+ K
Sbjct: 60 YLQRFGESGGAQLNVPKGRWVTGSFNLTSNFTLFLEEGAVILGSQDPK 107
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SIKDFG VGDG TS TE FR+A+RYVQ FG++GG QLNVPEG W+TGSF LTSNFTLFL
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 134 QKGAVILGSQELK 146
++GAVILGSQ+ K
Sbjct: 61 EEGAVILGSQDPK 73
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
VVMSI DFG VGDG TS TE FRKA++Y++ FGDKGG++L VP+G W+TGSF LTSNFTL
Sbjct: 68 VVMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTL 127
Query: 132 FLQKGAVILGSQE 144
FLQ+GA+IL SQ+
Sbjct: 128 FLQRGALILASQD 140
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 98.6 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
LPKR +SI DFG VGDG T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 55 LPKRPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLT 114
Query: 127 SNFTLFLQKGAVILGSQEL 145
S+ TLFL++GAVILGSQ+L
Sbjct: 115 SHLTLFLEEGAVILGSQDL 133
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI +FG VGDGTT TE FRKA+ ++ F + GG QL +P G WLTGSF LT +F
Sbjct: 42 RAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLTDHF 101
Query: 130 TLFLQKGAVILGSQELK 146
TL+L K AVILGSQ+L+
Sbjct: 102 TLYLHKEAVILGSQDLE 118
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ DFG VGDGTT T+ FRKA+ ++ + GG+QL VP G WLTGSF LTS+F
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHF 98
Query: 130 TLFLQKGAVILGSQE 144
TLF+ K AVILGSQ+
Sbjct: 99 TLFIHKDAVILGSQD 113
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 69 PKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
P R V S+++FG VGDG T T FR+AV ++A GG +L VP G WLTGSF LTS
Sbjct: 89 PSRAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTS 148
Query: 128 NFTLFLQKGAVILGSQE 144
FTLFL +GAVILGSQ+
Sbjct: 149 RFTLFLHRGAVILGSQD 165
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG TS T F A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 55 LEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLT 114
Query: 127 SNFTLFLQKGAVILGSQEL 145
S+ TLFL++GA ILGSQ+
Sbjct: 115 SHLTLFLERGATILGSQDF 133
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG TS T F A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 120 LEPRPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLT 179
Query: 127 SNFTLFLQKGAVILGSQEL 145
S+ TLFL++GA ILGSQ+
Sbjct: 180 SHLTLFLERGATILGSQDF 198
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLT SF LT
Sbjct: 32 LKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 91
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVILGSQ+
Sbjct: 92 SHLTLFLEKGAVILGSQD 109
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + L R +SI DFG VGDG T T F+ AV Y+ +F DKGG QL VP G WLTGS
Sbjct: 32 GRRSLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGS 91
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F LTS+ TLFL+ GAVI+ SQ+
Sbjct: 92 FSLTSHLTLFLENGAVIVASQD 113
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLT SF LT
Sbjct: 43 LKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLT 102
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVILGSQ+
Sbjct: 103 SHLTLFLEKGAVILGSQD 120
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 32 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 91
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL++GAVILGSQ+
Sbjct: 92 SHLTLFLERGAVILGSQD 109
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 157 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 216
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVI+G+Q+
Sbjct: 217 SHLTLFLEKGAVIIGTQD 234
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI DFG VGDG T F+ A+ Y+++F DKGG QL VP G WLTGSF LTS+
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 130 TLFLQKGAVILGSQEL 145
TLFL++GAVILGSQ+L
Sbjct: 61 TLFLEEGAVILGSQDL 76
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 34 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 93
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL++GAVILGSQ+
Sbjct: 94 SHLTLFLERGAVILGSQD 111
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ DFG VGDGTT T+ FRKA+ ++ + GG+QL VP G WLTGS LTS+F
Sbjct: 39 RAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHF 98
Query: 130 TLFLQKGAVILGSQE 144
TLF+ K AVILGSQ+
Sbjct: 99 TLFIHKDAVILGSQD 113
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 34 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 93
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLF++KGAVILGSQ+
Sbjct: 94 SHLTLFVEKGAVILGSQD 111
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG VGDG TS T+ F+ A+ ++ + GG+QL VP G WLTGSF LTS+FTLFL
Sbjct: 55 SITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTLFLH 114
Query: 135 KGAVILGSQELK 146
K AV+LGSQ+LK
Sbjct: 115 KDAVLLGSQDLK 126
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 89
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAV++G+Q+
Sbjct: 90 SHLTLFLEKGAVLIGTQD 107
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 40 LRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVR 98
+R G G FNP+ L R +SI +FG VGDG T T F+ A+
Sbjct: 16 VRVNGERGDRQCGFNPS-----------LKPRPHSVSILEFGAVGDGKTLNTIAFQNAIF 64
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
Y+++F DKGG QL VP G WLT SF LTS+ TLFL+KGAVI+GSQ+
Sbjct: 65 YLKSFADKGGAQLYVPPGTWLTQSFNLTSHLTLFLEKGAVIIGSQD 110
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG +L VP G WLTGSF LT
Sbjct: 32 LDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNLT 91
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVILGSQ+
Sbjct: 92 SHLTLFLEKGAVILGSQD 109
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI DFG VGDG T T F+ AV Y+ +F DKGG QL VP G WLTGSF LT
Sbjct: 36 LSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSLT 95
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+ GAVI+ SQ+
Sbjct: 96 SHLTLFLENGAVIVASQD 113
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGS LT
Sbjct: 35 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 94
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVILGSQ+
Sbjct: 95 SHLTLFLEKGAVILGSQD 112
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 32 LKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLT 91
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGAVILGSQ+
Sbjct: 92 SHLTLFLEKGAVILGSQD 109
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R + I DFG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LTS+
Sbjct: 36 ERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 95
Query: 129 FTLFLQKGAVILGSQE 144
TLFL+K AVIL SQ+
Sbjct: 96 LTLFLEKDAVILASQD 111
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R + I DFG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LTS+
Sbjct: 38 ERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 97
Query: 129 FTLFLQKGAVILGSQE 144
TLFL+K AVIL SQ+
Sbjct: 98 LTLFLEKDAVILASQD 113
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R + I DFG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LTS+
Sbjct: 36 ERPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSH 95
Query: 129 FTLFLQKGAVILGSQE 144
TLFL+K AVIL SQ+
Sbjct: 96 LTLFLEKDAVILASQD 111
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F A+ + + + GG QL VP G WLTGSF LTS+F
Sbjct: 46 RKHSAVLTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 105
Query: 130 TLFLQKGAVILGSQE 144
TLFLQKGAVILGSQ+
Sbjct: 106 TLFLQKGAVILGSQD 120
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ AV Y+++F DKGG QL +P G WLTGSF LTS+ TLFL
Sbjct: 41 VTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFL 100
Query: 134 QKGAVILGSQEL 145
+ GAVI+G+Q++
Sbjct: 101 ESGAVIVGTQDV 112
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGS LT
Sbjct: 30 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLT 89
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL KGAVILGSQ+
Sbjct: 90 SHLTLFLXKGAVILGSQD 107
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ AV Y+++F DKGG QL +P G WLTGSF LTS+ TLFL
Sbjct: 41 VTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFL 100
Query: 134 QKGAVILGSQEL 145
+ GAVI+G+Q++
Sbjct: 101 ESGAVIVGTQDV 112
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDGTTS T+ F+ A+ ++ F GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 44 SLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHFTLYLH 103
Query: 135 KGAVILGSQELK 146
K AV+L SQ+++
Sbjct: 104 KDAVLLASQDMQ 115
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ A+ Y+++F DKGG QL VP+G WLTGSF LTS+ TLFL
Sbjct: 37 VTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFL 96
Query: 134 QKGAVILGSQEL 145
+K AVI+G++E+
Sbjct: 97 EKDAVIVGTKEV 108
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG TS T+ F+ A+ Y+ + KGG QL VP G WLTGSF +TS+FTL+L
Sbjct: 71 SLTDFGGVGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLN 130
Query: 135 KGAVILGSQEL 145
K AV+L SQ++
Sbjct: 131 KDAVLLASQDM 141
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R S+++FG VGDG TS T FR+AV ++A GG +L VP G W+TGSF LTS
Sbjct: 75 RRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSR 134
Query: 129 FTLFLQKGAVILGSQE 144
FTLFL GA+ILGSQ+
Sbjct: 135 FTLFLHHGAIILGSQD 150
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R S+++FG VGDG TS T FR+AV ++A GG +L VP G W+TGSF LTS
Sbjct: 75 RRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSR 134
Query: 129 FTLFLQKGAVILGSQE 144
FTLFL GA+ILGSQ+
Sbjct: 135 FTLFLHHGAIILGSQD 150
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R S+++FG VGDG TS T FR+AV ++A GG +L VP G W+TGSF LTS
Sbjct: 75 RRAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSR 134
Query: 129 FTLFLQKGAVILGSQE 144
FTLFL GA+ILGSQ+
Sbjct: 135 FTLFLHHGAIILGSQD 150
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 60 AGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLW 118
G+PG R + ++ DFG VGDG T TE F +AV V FG KGG QLNVP G W
Sbjct: 59 GGIPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRW 118
Query: 119 LTGSFILTSNFTLFLQKGAVILGSQELK 146
LT F LTS+ TLFL + AVILG + K
Sbjct: 119 LTAPFNLTSHMTLFLAEDAVILGIDDEK 146
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 60 AGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLW 118
G+PG R + ++ DFG VGDG T TE F +AV V FG KGG QLNVP G W
Sbjct: 59 GGIPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRW 118
Query: 119 LTGSFILTSNFTLFLQKGAVILGSQELK 146
LT F LTS+ TLFL + AVILG + K
Sbjct: 119 LTAPFNLTSHMTLFLAEDAVILGIDDEK 146
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK I DFG VGDG TS T+ FR+A+ ++ + GG QL VP G WLTGSF LTS+F
Sbjct: 50 RKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHF 109
Query: 130 TLFLQKGAVILGSQ 143
TLF+ K A ILGSQ
Sbjct: 110 TLFVHKDAKILGSQ 123
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK I DFG VGDG TS T+ FR+A+ ++ + GG QL VP G WLTGSF LTS+F
Sbjct: 50 RKHTALITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHF 109
Query: 130 TLFLQKGAVILGSQ 143
TLF+ K A ILGSQ
Sbjct: 110 TLFVHKDAKILGSQ 123
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LTS+ T+FL
Sbjct: 43 VTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIFL 102
Query: 134 QKGAVILGSQEL 145
+K AVI+G++E+
Sbjct: 103 EKDAVIIGAKEV 114
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDGTTS T+ F+ A+ ++ F GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 54 SLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTLYLH 113
Query: 135 KGAVILGSQE 144
K AV+L SQ+
Sbjct: 114 KDAVLLASQD 123
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 65 DQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSF 123
++ L R +SI +FG VGDG T T F+ AV Y ++F DKGG +L VP G WLTGSF
Sbjct: 30 EKVLDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSF 89
Query: 124 ILTSNFTLFLQKGAVILGSQE 144
LTS+ TLFL++GA I+ SQ+
Sbjct: 90 NLTSHLTLFLERGATIIASQD 110
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG TS T+ F+ A+ ++ +G +GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 56 SLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLD 115
Query: 135 KGAVILGSQEL 145
+ AV+L SQ++
Sbjct: 116 RDAVLLASQDI 126
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 60 AGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLW 118
G+P R + ++ DFG VGDG T TE F++AV V FG KGG QLNVP G W
Sbjct: 58 GGIPARPMPMLRPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRW 117
Query: 119 LTGSFILTSNFTLFLQKGAVILGSQELK 146
LT F LTS+ TLFL + AVILG + K
Sbjct: 118 LTAPFNLTSHMTLFLAEDAVILGIDDEK 145
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ AV YV++F DKGG QL VP G WLTGSF LTS+ TL+L
Sbjct: 44 VTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHLTLYL 103
Query: 134 QKGAVILGSQE 144
++GAVI+G+++
Sbjct: 104 EEGAVIVGAKD 114
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 65 DQYLP-KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
DQ P R ++I +FG VGDG T T F+ AV YV++F DKGG QL VP G WLTGS
Sbjct: 23 DQAPPGSRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGS 82
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F LTS+ T++L++GAVI+G+++
Sbjct: 83 FNLTSHLTIYLEQGAVIVGAKD 104
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T F A+ Y+++F DKGG QL VP G WLTGSF LTS+ TLFL
Sbjct: 62 VSILEFGAVGDGITLNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFL 121
Query: 134 QKGAVILGSQE 144
++GA+I+ SQ+
Sbjct: 122 ERGAIIIASQD 132
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG TS T+ F+ A+ ++ +G +GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 56 SLTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLD 115
Query: 135 KGAVILGSQEL 145
+ AV+L SQ++
Sbjct: 116 RDAVLLASQDI 126
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGA IL S +
Sbjct: 91 SHLTLFLEKGATILASPD 108
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 33 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 92
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGA IL S +
Sbjct: 93 SHLTLFLEKGATILASPD 110
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ AV Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGA IL S +
Sbjct: 91 SHLTLFLEKGATILASPD 108
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 61 GLPGDQYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLW 118
LP + P+ R + ++ DFG VGDG T T F +AV + AF D+GG QLNVP G W
Sbjct: 62 ALPPSRPAPRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRW 121
Query: 119 LTGSFILTSNFTLFLQKGAVILGSQELK 146
LTG F LTS+ TLFL +GA ILG + K
Sbjct: 122 LTGPFNLTSHMTLFLAEGAEILGITDEK 149
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ DFG VGDGTTS T+ F+ A+ ++ F GG+QL VP G WLTGSF LTS+F
Sbjct: 49 RAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TL+L K AV+L SQ+
Sbjct: 109 TLYLHKDAVLLASQD 123
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 31 LDPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLT 90
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL+KGA IL S +
Sbjct: 91 SHLTLFLEKGATILASPD 108
>gi|326489917|dbj|BAJ94032.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 62 LPGDQYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWL 119
LP + P+ R + ++ DFG VGDG T T F +AV + AF D+GG QLNVP G WL
Sbjct: 63 LPPSRPAPRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWL 122
Query: 120 TGSFILTSNFTLFLQKGAVILG 141
TG F LTS+ TLFL +GA ILG
Sbjct: 123 TGPFNLTSHMTLFLAEGAEILG 144
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T F+ AV Y ++F DKGG +L VP G WLTGSF LTS+ TLFL
Sbjct: 40 VSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHLTLFL 99
Query: 134 QKGAVILGSQE 144
++GA I+ SQ+
Sbjct: 100 ERGATIIASQD 110
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T F A+ Y+++F DKGG QL VP G WLTGSF LT
Sbjct: 100 LKARPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLT 159
Query: 127 SNFTLFLQKGAVILGSQE 144
++ TLFL++GA I+ SQ+
Sbjct: 160 NHLTLFLERGATIIASQD 177
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VG+G T T F+ AV Y ++F DKGG QL VP+G WLTGSF LTS+ TLFL
Sbjct: 43 VTITEFGAVGNGRTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFL 102
Query: 134 QKGAVILGSQE 144
++GAVI+G++E
Sbjct: 103 EEGAVIIGAKE 113
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/75 (58%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ +FG VGDG TS T FR AV + F D GG+ L VP G WLTGSF LTS+F
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHF 122
Query: 130 TLFLQKGAVILGSQE 144
TLFL + AVIL SQE
Sbjct: 123 TLFLHRDAVILASQE 137
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S++DFG VGDG TS T+ F+ A+ ++ F GG+QL VP G WLTGSF LTS+FTLFL
Sbjct: 54 SLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHFTLFLD 113
Query: 135 KGAVILGSQE 144
K AV+L SQ+
Sbjct: 114 KDAVLLASQD 123
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R ++I +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LTS+
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 130 TLFLQKGAVILGSQELK 146
T+FL+K AVI+G++E+
Sbjct: 66 TIFLEKDAVIIGAKEVS 82
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R ++I +FG VGDG T T F+ AV YV++F DKGG QL VP G WLTGSF LTS+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 130 TLFLQKGAVILGSQE 144
TL+L++GAVI+G+++
Sbjct: 100 TLYLEEGAVIVGAKD 114
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R VV ++ DFG VGDG T TE F +AV + FG KGG QLNVP G WLT F LTS+
Sbjct: 70 RPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTSHI 129
Query: 130 TLFLQKGAVILG 141
TLFL + AVIL
Sbjct: 130 TLFLAQDAVILA 141
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R ++I +FG VGDG T T F+ AV YV++F DKGG QL VP G WLTGSF LTS+
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 130 TLFLQKGAVILGSQE 144
TL+L++GAVI+G+++
Sbjct: 100 TLYLEEGAVIVGAKD 114
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+++FG VGDGTT T+ F+ A+ ++ + GG+QL VP G WLTGSF LTS+F
Sbjct: 39 RAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHF 98
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AVIL SQ+
Sbjct: 99 TLFLHKDAVILASQD 113
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G++ R +SI +FG VGDG T T F+ AV Y+Q+F KGG QL VP G WLTGS
Sbjct: 25 GNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGS 84
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F L S+ TLFL G+VIL SQ+
Sbjct: 85 FTLISHLTLFLDTGSVILASQD 106
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ A+ Y+++F DKGG QL VP G WLTGSF LTS+ T+FL
Sbjct: 33 VTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIFL 92
Query: 134 QKGAVILGSQELK 146
+K AVI+G++E+
Sbjct: 93 EKDAVIIGAKEVS 105
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G++ R +SI +FG VGDG T T F+ AV Y+Q+F KGG QL VP G WLTGS
Sbjct: 25 GNRRSVARPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGS 84
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F L S+ TLFL G+VIL SQ+
Sbjct: 85 FTLISHLTLFLDTGSVILASQD 106
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+KDFG VGDG TS T+ F+ A+ ++ +GG+QL VP G WLTGSF L S+FTL+L
Sbjct: 55 VSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYL 114
Query: 134 QKGAVILGSQEL 145
K AV+L SQ++
Sbjct: 115 HKDAVLLASQDI 126
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +S+KDFG VGDG TS T+ F+ A+ ++ +GG+QL VP G WLTGSF L S+F
Sbjct: 7 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 66
Query: 130 TLFLQKGAVILGSQELK 146
TL+L K AV+L SQ++
Sbjct: 67 TLYLHKDAVLLASQDIN 83
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG T T+ F A+ + + + GG QL VP G WLTGSF LTS+F
Sbjct: 51 RKHNAVLTDFGAVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 110
Query: 130 TLFLQKGAVILGSQE 144
TLFLQKGAVIL SQ+
Sbjct: 111 TLFLQKGAVILASQD 125
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R SI +FG VGDG TS T+ F+ AV + + D GG QL VP G WLTGSF LTS+F
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 130 TLFLQKGAVILGSQE 144
TLFL + AV+L SQ+
Sbjct: 122 TLFLHQDAVLLASQD 136
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ +FG VGDG TS T FR AV + F D GG+ L VP G WLTG+F LTS+F
Sbjct: 64 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSHF 123
Query: 130 TLFLQKGAVILGSQE 144
TLFL + AVIL SQE
Sbjct: 124 TLFLHRDAVILASQE 138
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 44 GFSGAEGALFNP--ATCVAGLPGDQYLPK--RKVVMSIKDFG-VGDGTTSTTEVFRKAVR 98
GFS E + N +T + G +YL RK + DFG +GDG TS T+ FR+A+
Sbjct: 816 GFSIMESRIQNNVGSTSIESNKGIEYLALNCRKHRAVLTDFGAIGDGKTSNTKAFREAIT 875
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
+ GG QL VP G WLTGSF LTS+FTLF+Q+GA IL SQ+
Sbjct: 876 KLTTKAVDGGVQLIVPPGNWLTGSFNLTSHFTLFIQQGATILASQD 921
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ AV Y ++F DKGG QL VP+G WLTGSF LTS+ TLFL
Sbjct: 35 VTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFL 94
Query: 134 QKGAVILGSQE 144
++ AVI+G+++
Sbjct: 95 EEEAVIIGTKD 105
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T F+ AV Y ++F DKGG QL VP+G WLTGSF LTS+ TLFL
Sbjct: 35 VTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFL 94
Query: 134 QKGAVILGSQE 144
++ AVI+G+++
Sbjct: 95 EEEAVIIGTKD 105
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG T T+ F A+ + + + GG QL VP G WLTGSF LTS+F
Sbjct: 51 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 110
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK AVILGSQ+
Sbjct: 111 TLFLQKDAVILGSQD 125
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ +FG VGDG TS T+ FR AV + F D GG+ L VP G WLTG+F LTS+F
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSHF 122
Query: 130 TLFLQKGAVILGSQE 144
TLFL + AVIL SQE
Sbjct: 123 TLFLHRDAVILASQE 137
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R SI +FG VGDG TS T+ F+ AV + + D GG QL VP G WLTGSF LTS+F
Sbjct: 62 RAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSHF 121
Query: 130 TLFLQKGAVILGSQE 144
TLFL + AV+L SQ+
Sbjct: 122 TLFLHQDAVLLASQD 136
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG TS T+ F+ A+ ++ + KGG QL VP G WLTGSF L S+FTL+L
Sbjct: 56 SLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLN 115
Query: 135 KGAVILGSQEL 145
K AV+L SQ++
Sbjct: 116 KDAVLLASQDI 126
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++ DFG VGDG TS T+ F+ A+ ++ + +GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 56 ALTDFGGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLD 115
Query: 135 KGAVILGSQEL 145
K AV+L SQ++
Sbjct: 116 KDAVLLASQDI 126
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R+ + DFG VGDG TS T+ FR+A+ ++ GG QL VP G WLTGSF LTS+F
Sbjct: 50 RQHTAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHF 109
Query: 130 TLFLQKGAVILGSQE 144
TLF+ K A IL SQ+
Sbjct: 110 TLFVHKDATILASQD 124
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V ++ DFG VGDG T TE F +AV + +GG QLNVP G WLT F LTS+
Sbjct: 73 RPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHM 132
Query: 130 TLFLQKGAVILGSQELK 146
TLFL +GAVILG Q+ K
Sbjct: 133 TLFLAEGAVILGIQDEK 149
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
G+GDG TS T+ F+ A+ +++ F GG +L VP G WLTGSF LTS+FTL++ K AVIL
Sbjct: 56 GIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTLYIHKDAVIL 115
Query: 141 GSQE 144
GSQE
Sbjct: 116 GSQE 119
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG GDG T T+ F+ A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 297 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 356
Query: 130 TLFLQKGAVILGSQE 144
TLF+ K AVILG+Q+
Sbjct: 357 TLFVHKDAVILGAQD 371
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ DFG VGDG TS T+ F+ A+ ++ + KGG QL VP G WLTGSF L S+F
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 130 TLFLQKGAVILGSQEL 145
TL+L K AV+L SQ++
Sbjct: 111 TLYLNKDAVLLASQDI 126
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+++FG VGDGTT T+ F+ A+ + + GG+QL VP G WLTGSF LTS+F
Sbjct: 64 RAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHF 123
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AVIL SQ+
Sbjct: 124 TLFLHKDAVILASQD 138
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 69 PK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
PK R VV ++ DFG VGDG T T+ F +AV + F ++GG QLNVP G WLT F LT
Sbjct: 49 PKLRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLT 108
Query: 127 SNFTLFLQKGAVILGSQELK 146
S TLFL + AVIL Q+ K
Sbjct: 109 SRMTLFLARDAVILAVQDEK 128
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T F+KA+ + GG QL VP G WLTGSF LTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 130 TLFLQKGAVILGSQE 144
TLF+Q+GA IL SQ+
Sbjct: 101 TLFIQRGATILASQD 115
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFG--DKGGTQLNVPEGLWLTGSFILTSNFTLF 132
SI DFG +GDG T T F+ A+ Y+ + DKGG L VPEG WLTGSF LTS+FTL+
Sbjct: 30 SIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTSHFTLY 89
Query: 133 LQKGAVILGSQE 144
L++GAVILGSQ+
Sbjct: 90 LERGAVILGSQD 101
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDGTT TE F+ A+ ++ F +GG+ L VP G WLTGSF LTS FTL+L
Sbjct: 45 SVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEGGSLLYVPPGRWLTGSFNLTSYFTLYLD 104
Query: 135 KGAVILGSQE 144
K AV+L SQ+
Sbjct: 105 KDAVLLASQD 114
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
LP+ R V ++ DFG VGDG T T+ F KA+ + KGG QLNVP G WLT F L
Sbjct: 67 LPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNL 126
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS+ TLFL +GAVILG Q+ K
Sbjct: 127 TSHLTLFLDEGAVILGIQDEK 147
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
LP+ R V ++ DFG VGDG T T+ F KA+ + KGG QLNVP G WLT F L
Sbjct: 67 LPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNL 126
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS+ TLFL +GAVILG Q+ K
Sbjct: 127 TSHLTLFLDEGAVILGIQDEK 147
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
LP+ R V ++ DFG VGD T TE F +A+ + G KGG QLNVP G WLT F L
Sbjct: 67 LPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS+ TLFL + AVILG Q+ K
Sbjct: 127 TSHMTLFLDQDAVILGIQDEK 147
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ FR A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 130 TLFLQKGAVILGSQE 144
TLF+Q+GA IL SQ+
Sbjct: 101 TLFIQRGATILASQD 115
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG S T+ F+ A+ ++ + +GG+QL VP G WLTGSF LTS+FTL+L
Sbjct: 56 SLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLD 115
Query: 135 KGAVILGSQEL 145
K AV+L SQ++
Sbjct: 116 KDAVLLASQDI 126
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ FR A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 41 RKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHF 100
Query: 130 TLFLQKGAVILGSQE 144
TLF+Q+GA IL SQ+
Sbjct: 101 TLFIQRGATILASQD 115
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFG--DKGGTQLNVPEGLWLTGSFILTSNFTLF 132
SI DFG +GDG T T F+ A+ Y+ + DKGG L VPEG WLTGSF LTS+FTL+
Sbjct: 30 SIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTSHFTLY 89
Query: 133 LQKGAVILGSQE 144
L++GAVILGSQ+
Sbjct: 90 LERGAVILGSQD 101
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG TS T+ F+ A+ ++ + KGG QL VP G WLTGSF L S+FTL+L
Sbjct: 56 SLIDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLN 115
Query: 135 KGAVILGSQELK 146
K A +L SQ+++
Sbjct: 116 KDAFLLASQDIR 127
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG T T+ F+ AV + +G +GG QL VP G WLTGSF LTS+FTLFL
Sbjct: 64 SLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLH 123
Query: 135 KGAVILGSQEL 145
+ AV+L SQ++
Sbjct: 124 RDAVLLASQDI 134
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
G+GDG TS T+ F+ A+ +++ F GG +L VP G WLTGSF LTS+FTL++ K AVIL
Sbjct: 13 GIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTLYIHKDAVIL 72
Query: 141 GSQE 144
GSQE
Sbjct: 73 GSQE 76
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG T T+ F+ AV + +G +GG QL VP G WLTGSF LTS+FTLFL
Sbjct: 52 SLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLH 111
Query: 135 KGAVILGSQEL 145
+ AV+L SQ++
Sbjct: 112 RDAVLLASQDI 122
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
LP+ R V ++ DFG VGD T TE F +A+ + G KGG QLNVP G WLT F L
Sbjct: 67 LPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNL 126
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS+ TLFL + AVILG Q+ K
Sbjct: 127 TSHMTLFLDQDAVILGIQDEK 147
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLTGSF L S+ TL+L
Sbjct: 43 VAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 103 DKDAVILGS 111
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
T AG+ ++ P+ +SI DFG VGDG T T FRKAV +Q +GGT L+VP
Sbjct: 30 TSCAGVAPAKHRPE---AISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPA 86
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
G WLTGSF LTS+ TLFL +GAV+ +Q+ +
Sbjct: 87 GTWLTGSFNLTSHMTLFLARGAVLKATQDTR 117
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R S+ DFG VGDG T T+ F+ AV + +G +GG QL VP G WLTGSF LTS+F
Sbjct: 45 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHF 104
Query: 130 TLFLQKGAVILGSQELK 146
TLFL + AV+L SQ++
Sbjct: 105 TLFLHRDAVLLASQDIS 121
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
R V+SI DFG VGDG T T FRKAV +Q +GGT L+VP G WL GSF LTS+
Sbjct: 45 HRPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSH 104
Query: 129 FTLFLQKGAVILGSQELK 146
TLFL +GAV+ +Q+ +
Sbjct: 105 MTLFLARGAVLKATQDTR 122
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 103 DKDAVILGS 111
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
R V+SI DFG VGDG T T FRKAV +Q +GGT L+VP G WL GSF LTS+
Sbjct: 45 HRPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSH 104
Query: 129 FTLFLQKGAVILGSQELK 146
TLFL +GAV+ +Q+ +
Sbjct: 105 MTLFLARGAVLKATQDTR 122
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDGTT+ T+ F+ A+ ++ F +GG+ L VP G WLTGSF LTS FTL+L
Sbjct: 54 SVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLD 113
Query: 135 KGAVILGSQE 144
K AV+L SQ+
Sbjct: 114 KDAVLLASQD 123
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI +FG VGDG T T F A+ Y++ + DKGG QL +P G WLTGS L S+
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 130 TLFLQKGAVILGSQELK 146
TLFL+ A ILGSQ+LK
Sbjct: 61 TLFLENEATILGSQDLK 77
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 69 PK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
PK R VV + +FG VGDG T TE F + V + GDKGG QLNVP G WLT F LT
Sbjct: 64 PKLRPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLT 123
Query: 127 SNFTLFLQKGAVILGSQELK 146
S+ TLFL + AVIL Q+ K
Sbjct: 124 SHMTLFLARDAVILAVQDEK 143
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFG--DKGGTQLNVPEGLWLTGSFILTS 127
R S+ DFG VGDGTTS T FR AV ++ + D GG L VP G WLTG F LTS
Sbjct: 57 RAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTS 116
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTLFL AVIL SQ++
Sbjct: 117 HFTLFLHSDAVILASQDI 134
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T F A+ Y++ + DKGG QL +P G WLTGS L S+ TLFL
Sbjct: 49 VSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHLTLFL 108
Query: 134 QKGAVILGSQEL 145
+ A ILGSQ+L
Sbjct: 109 ENEATILGSQDL 120
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F +A++ + + GG QL VP G WLTGSF LTS+F
Sbjct: 10 RKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHF 69
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AV+L SQ+
Sbjct: 70 TLFLHKDAVLLASQD 84
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK A ILGSQ+
Sbjct: 109 TLFLQKEATILGSQD 123
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
KGA ILGS
Sbjct: 103 DKGATILGS 111
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
KGA ILGS
Sbjct: 103 DKGATILGS 111
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG GDG T T+ F+ A+ ++ F D GG +L VP G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TL++ K AVILG+Q+
Sbjct: 109 TLYIDKDAVILGAQD 123
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G WLTGSF LTS+F
Sbjct: 167 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 226
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK A ILGSQ+
Sbjct: 227 TLFLQKEATILGSQD 241
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
KGA ILGS
Sbjct: 103 DKGATILGS 111
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 20 PIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPK--RKVVMSI 77
P+ L + L + ++ RR G PA +AG YL R S+
Sbjct: 13 PLHVLRSVCVLLLAASATVAARRHG----------PAAPIAG--QSMYLAPSCRAHTASL 60
Query: 78 KDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGG--TQLNVPEGLWLTGSFILTSNFTLFLQ 134
DFG VGDGTTS T F+ AV ++ + +GG L VP G WLTG F LTS+FTLFL
Sbjct: 61 TDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTSHFTLFLH 120
Query: 135 KGAVILGSQEL 145
AVILGSQ++
Sbjct: 121 SDAVILGSQDM 131
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
+P + Y P ++I +FG +GDG T T+ F+ A+ Y+ +F DKGG QL VP G WLT
Sbjct: 17 MPPNVYRPHS---VTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLT 73
Query: 121 GSFILTSNFTLFLQKGAVILGSQE 144
GSF L S+ TL L K AVI+GS +
Sbjct: 74 GSFNLISHLTLSLDKDAVIIGSPD 97
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V ++ DFG VGDG T T F +AV + +KGG QLNVP GLWLT F LTS+
Sbjct: 60 RPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHM 119
Query: 130 TLFLQKGAVILGSQELK 146
TLFL + AVILG Q+ K
Sbjct: 120 TLFLAQDAVILGIQDEK 136
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+R + + GG QL VP G WLTG F LTS+F
Sbjct: 48 RKHSAVLTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHF 107
Query: 130 TLFLQKGAVILGSQ 143
TLFL K AVIL SQ
Sbjct: 108 TLFLHKDAVILASQ 121
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK A ILGSQ+
Sbjct: 109 TLFLQKEATILGSQD 123
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R SI DFG VGDGTT T F +A+ + + DKGG +L +P G WLTGS L S+
Sbjct: 80 RRPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISH 139
Query: 129 FTLFLQKGAVILGSQEL 145
TLFL+ GA ILGS++
Sbjct: 140 LTLFLESGATILGSEDF 156
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 53 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWL 112
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 113 DKNAVILGS 121
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ +FG GDG TS T+ F+ A+ ++ F D GG L VP G WLTGSF LTS+FTL++ K
Sbjct: 44 VMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHFTLYIHK 103
Query: 136 GAVILGSQE 144
A+ILGSQ+
Sbjct: 104 DAIILGSQD 112
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
K A+ILGS
Sbjct: 103 DKDAIILGS 111
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG GDG T T+ F+ A+ ++ F D GG +L VP G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TL++ K AVILG+Q+
Sbjct: 109 TLYIDKDAVILGAQD 123
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
+PK R V ++ DFG VGDG T TE F +AV + +GG QLNVP G WLT F L
Sbjct: 69 IPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNL 128
Query: 126 TSNFTLFLQKGAVILGSQE 144
TS+ TLFL + AVILG Q+
Sbjct: 129 TSHMTLFLAEDAVILGIQD 147
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
+P + Y P ++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLT
Sbjct: 33 MPPNVYRPHS---VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLT 89
Query: 121 GSFILTSNFTLFLQKGAVILGSQE 144
GSF L S+ TL L K A+I+GS +
Sbjct: 90 GSFHLISHLTLSLDKDAIIIGSPD 113
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V+SI DFG VGDG T T FRKAV +Q +GGT L+VP G WL GSF LTS+
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 130 TLFLQKGAVILGSQELK 146
TLFL +GAV+ +Q+ +
Sbjct: 106 TLFLARGAVLKATQDTR 122
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
+P + Y P ++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLT
Sbjct: 33 MPPNVYRPHS---VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLT 89
Query: 121 GSFILTSNFTLFLQKGAVILGSQE 144
GSF L S+ TL L K A+I+GS +
Sbjct: 90 GSFHLISHLTLSLDKDAIIIGSPD 113
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI DFG VGDG T T F A+ Y++++ GG QL +P GLWLTGS L S+
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 130 TLFLQKGAVILGSQEL 145
TLFL+ GA ILGS++
Sbjct: 61 TLFLENGATILGSEDF 76
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 103 DKDAVILGS 111
>gi|297817564|ref|XP_002876665.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
gi|297322503|gb|EFH52924.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
R +SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+
Sbjct: 39 HRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISH 98
Query: 129 FTLFLQKGAVILGS 142
TL+L KGA ILGS
Sbjct: 99 LTLWLDKGATILGS 112
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG T T+ F A+ + + + GG QL VP G WLTGSF LTS+F
Sbjct: 60 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 119
Query: 130 TLFLQKGAVILGSQ 143
TLFLQK AVIL SQ
Sbjct: 120 TLFLQKDAVILASQ 133
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+VF+ A+ + + GG QL +P G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AV+L SQ+
Sbjct: 109 TLFLHKEAVLLASQD 123
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLSL 102
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 103 DKDAVILGS 111
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 49 RKHSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHF 108
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AVIL SQ+
Sbjct: 109 TLFLHKDAVILASQD 123
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG T T+ F A+ + + + GG QL VP G WLTGSF LTS+F
Sbjct: 52 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 111
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK +VIL SQ+
Sbjct: 112 TLFLQKDSVILASQD 126
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 69 PK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
PK R VV + +FG VGDG T TE F + V + GDKGG QLNVP G WLT F LT
Sbjct: 69 PKLRPVVFCLTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLT 128
Query: 127 SNFTLFLQKGAVILGSQELK 146
S+ TLFL + +VIL Q+ K
Sbjct: 129 SHMTLFLARDSVILAVQDEK 148
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ ++ DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 82 VSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHLTLWL 141
Query: 134 QKGAVILGS 142
K AVILGS
Sbjct: 142 DKDAVILGS 150
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G VGDG T T+ F+ AV ++ + +GG QL VP G WLTGSF LTS+FTLFL
Sbjct: 46 SITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLH 105
Query: 135 KGAVILGSQEL 145
K A++L +Q+L
Sbjct: 106 KDAILLAAQDL 116
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG T T+ F+ A+ + + D GG +L VP G WLTGSF LTS+F
Sbjct: 54 RKHTAFLTDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHF 113
Query: 130 TLFLQKGAVILGSQ 143
TLFL +GA IL SQ
Sbjct: 114 TLFLHRGATILASQ 127
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG VGDG T T+ F+ A+ Y+ +F KGG QL VP G WLTGSF L S+ TL L
Sbjct: 61 SITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLD 120
Query: 135 KGAVILGSQE 144
K AVILGS +
Sbjct: 121 KDAVILGSTD 130
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
+P + Y P ++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLT
Sbjct: 33 MPPNVYRPHS---VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLT 89
Query: 121 GSFILTSNFTLFLQKGAVILGSQE 144
GSF L S+ TL L K A+I+GS +
Sbjct: 90 GSFHLISHLTLSLDKDAIIIGSPD 113
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG +GDG S T+ FR+A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 846 RKHSAVLTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLTSHF 905
Query: 130 TLFLQKGAVILGSQE 144
TLF+Q+GA IL SQ+
Sbjct: 906 TLFIQQGATILASQD 920
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R+ + DFG +GDG TS T+ FR+A+R + + GG+QL VP+G WLTGSF LTS+F
Sbjct: 51 RRQSAILTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHF 110
Query: 130 TLFLQKGAVILGSQE 144
TL +++GA IL SQ+
Sbjct: 111 TLHIKEGATILASQD 125
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 78.6 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
+PK R V ++ DFG VGDG T TE F +AV + G KGG QLNVP G W+T F L
Sbjct: 68 MPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNL 127
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS+ TLFL + ++ILG ++ K
Sbjct: 128 TSHMTLFLAEDSIILGIEDEK 148
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 78.6 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG VGDG TS T+ F++A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 41 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 100
Query: 130 TLFLQKGAVILGSQE 144
TLF+QKGA IL SQ+
Sbjct: 101 TLFIQKGATILASQD 115
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 78.2 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG QL VP G WLTGSF L+S+F
Sbjct: 28 RKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGSFNLSSHF 87
Query: 130 TLFLQKGAVILGSQE 144
TLFL K AV+L SQ+
Sbjct: 88 TLFLHKDAVLLASQD 102
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 51 VSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWL 110
Query: 134 QKGAVILGS 142
AVILGS
Sbjct: 111 DNDAVILGS 119
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG VGDG TS T+ F++A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 111
Query: 130 TLFLQKGAVILGSQE 144
TLF+QKGA IL SQ+
Sbjct: 112 TLFIQKGATILASQD 126
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y+ +F +KGG QL VP G WLTGSF L S+ T+ L
Sbjct: 44 VSITEFGAVGDGMTRNTKAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHLTVSL 103
Query: 134 QKGAVILGSQE 144
K AVILGS +
Sbjct: 104 DKDAVILGSPD 114
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG VGDG TS T+ F++A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHF 111
Query: 130 TLFLQKGAVILGSQE 144
TLF+QKGA IL SQ+
Sbjct: 112 TLFIQKGATILASQD 126
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G VGDG T T+ F+ AV ++ + GG QL VP G WLTGSF LTS+FTLFL
Sbjct: 46 SITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHFTLFLH 105
Query: 135 KGAVILGSQEL 145
K A++L +Q+L
Sbjct: 106 KDAILLAAQDL 116
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P P+ + V SI +FG VGDG T T F KAV +Q +GGT L VP
Sbjct: 29 TCAGAVPAR---PRPETV-SIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPA 84
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
G WLTGSF LTS+ TLFL +GAV+ +QE +
Sbjct: 85 GTWLTGSFNLTSHMTLFLARGAVLKATQETR 115
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 55 PATCVAGLPGDQYL-------PKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGD 105
P A PGD P R+V S+++FG VGDG T T FR+AV
Sbjct: 61 PHDAPAHAPGDSCAGFYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVG 120
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
GG +L+VP G WLTGSF LTS FTLFL +GAVILGSQ+
Sbjct: 121 GGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAVILGSQD 159
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P P+ + V SI +FG VGDG T T F KAV +Q +GGT L VP
Sbjct: 29 TCAGAVPAR---PRPETV-SIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPA 84
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
G WLTGSF LTS+ TLFL +GAV+ +QE +
Sbjct: 85 GTWLTGSFNLTSHMTLFLARGAVLKATQETR 115
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 50 GALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGG 108
A+++ ATC +P L R +SI DFG VGDG T T+ FR AV +Q +GG
Sbjct: 20 AAIYSAATCSNIVP----LRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGG 75
Query: 109 TQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
T L VP G++LT SF LTS+ TL+L GAVI +QEL
Sbjct: 76 TVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQEL 112
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI +FG VGDG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+
Sbjct: 39 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 130 TLFLQKGAVILGS 142
TL+L K A+ILGS
Sbjct: 99 TLWLDKDAIILGS 111
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 55 PATCVAGLPGDQYL-------PKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGD 105
P A PGD P R+V S+++FG VGDG T T FR+AV
Sbjct: 61 PHDAPAHAPGDSCAGFYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVG 120
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
GG +L+VP G WLTGSF LTS FTLFL +GAVILGSQ+
Sbjct: 121 GGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAVILGSQD 159
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ +FG VGDG TS T+ F+ A+ + + GG QL VP G WLTGSF LTS+FTL+L
Sbjct: 49 SLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHFTLYLH 108
Query: 135 KGAVILGSQEL 145
K +V+L SQ+L
Sbjct: 109 KDSVLLASQDL 119
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G WLTGSF LTS+F
Sbjct: 135 RKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHF 194
Query: 130 TLFLQKGAVILGSQE 144
TLFLQK A ILGSQ+
Sbjct: 195 TLFLQKEATILGSQD 209
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + +FG VGDG TS T+ F++A+ + GG QL VP G WLTGSF L+S+F
Sbjct: 52 RKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHF 111
Query: 130 TLFLQKGAVILGSQE 144
TLF+QKGA IL SQ+
Sbjct: 112 TLFIQKGATILASQD 126
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T+ F+ A+ Y+ +F DKGG QL VP G WLTGSF L S+ TL L
Sbjct: 43 VTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSL 102
Query: 134 QKGAVILGSQE 144
K AVI+GS +
Sbjct: 103 DKDAVIIGSPD 113
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/99 (49%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 55 PATCVAGLPGDQYL-------PKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGD 105
P A PGD P R+V S+++FG VGDG T T FR+AV
Sbjct: 61 PHDAPAHAPGDSCAGFYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVG 120
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
GG +L+VP G WLTGSF LTS FTLFL +GAVILGSQ+
Sbjct: 121 GGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAVILGSQD 159
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 45 FSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAF 103
F A A+ + C G P R ++I +FG VGDG T T+ F+ A+ Y+ +F
Sbjct: 10 FIDAPWAIRGNSHCQWGNPA----VIRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSF 65
Query: 104 GDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
DKGG +L VP G WLTGSF L S+ TL+L K A+ILGS
Sbjct: 66 ADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAIILGS 104
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ FR A+ + GG L VP G WLTGSF LTS+F
Sbjct: 52 RKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLTSHF 111
Query: 130 TLFLQKGAVILGSQ 143
TL++ K AV+LGSQ
Sbjct: 112 TLYIHKDAVLLGSQ 125
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLTG F L S+ TL L
Sbjct: 43 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSL 102
Query: 134 QKGAVILGS 142
K AVI+GS
Sbjct: 103 DKDAVIIGS 111
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLTG F L S+ TL L
Sbjct: 43 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHLTLSL 102
Query: 134 QKGAVILGS 142
K AVI+GS
Sbjct: 103 DKDAVIIGS 111
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R ++ DFG VGDG T T+ F +AV + A D+GG QLNVP G WLT F LTS+
Sbjct: 74 RPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSHM 133
Query: 130 TLFLQKGAVILGSQELK 146
TLFL +GA ILG + K
Sbjct: 134 TLFLAEGAEILGITDEK 150
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L +R +SI DFG VGDG T T+ F A++Y+ + D G QL +P G WLTGS L
Sbjct: 16 LLRRPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLI 75
Query: 127 SNFTLFLQKGAVILGSQELK 146
S+ TLFL+ GA ILGS++
Sbjct: 76 SHLTLFLENGANILGSEDFN 95
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
PK R VV ++ DFG VGDG T TE F KA+ + KGG QLNVP G WLT F L
Sbjct: 58 FPKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNL 117
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS TLFL + A IL Q+ K
Sbjct: 118 TSYMTLFLSENAEILALQDEK 138
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ F+ A+ Y +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 43 VSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHLTLWL 102
Query: 134 QKGAVILGS 142
GA ILGS
Sbjct: 103 DSGATILGS 111
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
PK R VV ++ DFG VGDG T TE F KA+ + KGG QLNVP G WLT F L
Sbjct: 58 FPKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNL 117
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS TLFL + A IL Q+ K
Sbjct: 118 TSYMTLFLSENAEILALQDEK 138
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ TL+L
Sbjct: 51 VSITEFGAVGDGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHLTLWL 110
Query: 134 QKGAVILGS 142
AVILGS
Sbjct: 111 DNDAVILGS 119
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLTGSF L S+ TL L
Sbjct: 27 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSL 86
Query: 134 QKGAVILGSQE 144
K A I+GS +
Sbjct: 87 DKDAEIIGSPD 97
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +FG VGDG T T+ F+ A+ Y+ +F DKGG QL VP G WLTGSF L S+ TL L
Sbjct: 43 VTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSL 102
Query: 134 QKGAVILGSQE 144
K A I+GS +
Sbjct: 103 DKDAEIIGSPD 113
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V SI DFG V DG T T+ F+KA+ ++ +FG GG L +P G WLTG F LTS+
Sbjct: 55 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 114
Query: 130 TLFLQKGAVILGSQE 144
TLFL++ A IL S++
Sbjct: 115 TLFLEQDATILASED 129
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G WLTG F LTS+F
Sbjct: 44 RKHSAVLTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHF 103
Query: 130 TLFLQKGAVILGSQE 144
TLFL GAVIL SQ+
Sbjct: 104 TLFLDFGAVILASQD 118
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+R V S+++FG VGDG TS T F++AV ++ G GG +L VP G WLTGSF LTS
Sbjct: 74 RRAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSR 133
Query: 129 FTLFLQKGAVILGSQE 144
FTLFL GAVILGSQ+
Sbjct: 134 FTLFLHHGAVILGSQD 149
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
PK R VV ++ DFG VGDG T TE F +A+ + KGG QLNVP G WLT F L
Sbjct: 61 FPKLRPVVFNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNL 120
Query: 126 TSNFTLFLQKGAVILGSQELK 146
TS TLFL + A IL Q+ K
Sbjct: 121 TSYMTLFLAENAEILALQDEK 141
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG VGDG T T+ F+ A+ ++ +F KGG QL VP G WLTGSF L S+ TL L
Sbjct: 54 SVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLD 113
Query: 135 KGAVILGSQE 144
K AVILGS +
Sbjct: 114 KDAVILGSPD 123
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++ DFG VGDG TE F +AV + A ++GG QLNVP G WLT F LTS+ TLFL
Sbjct: 83 NLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 142
Query: 135 KGAVILGSQELK 146
+GA ILG + K
Sbjct: 143 EGAEILGITDEK 154
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V SI DFG V DG T T+ F+KA+ ++ +FG GG L +P G WLTG F LTS+
Sbjct: 26 RPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSHM 85
Query: 130 TLFLQKGAVILGSQE 144
TLFL++ A IL S++
Sbjct: 86 TLFLEQDATILASED 100
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG V DG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ T+ L
Sbjct: 73 VSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSL 132
Query: 134 QKGAVILGSQE 144
AVI+GSQ+
Sbjct: 133 DADAVIIGSQD 143
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG GDG T T+ F+ A+ + GG QL VP G WLTGSF LTS+F
Sbjct: 42 RKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHF 101
Query: 130 TLFLQKGAVILGSQE 144
TLF+ K AVILG+Q+
Sbjct: 102 TLFVHKDAVILGAQD 116
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG V DG T T+ F+ A+ Y+ +F DKGG +L VP G WLTGSF L S+ T+ L
Sbjct: 73 VSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHLTVSL 132
Query: 134 QKGAVILGSQE 144
AVI+GSQ+
Sbjct: 133 DADAVIIGSQD 143
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK I +FG GDG T T+ F+ AV ++ GG QL VP G WLTGSF L S+F
Sbjct: 7 RKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHF 66
Query: 130 TLFLQKGAVILGSQELK 146
TL+L +GAV+L SQ+ K
Sbjct: 67 TLYLHQGAVLLASQDEK 83
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P + R +SI DFG VGDG T T+ FR A+ +Q +GGT L +P
Sbjct: 28 TCSGIVP----MRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPP 83
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LTGSF LTS+ TL+L +GAVI +Q+
Sbjct: 84 GVFLTGSFNLTSHMTLYLARGAVIKATQD 112
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNV 113
+C G+ +R S+++FG VGDG TS T FR+AV ++ G L V
Sbjct: 59 SCAGFYRGEGAGGRRAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEV 118
Query: 114 PEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
P G WLTGSF LTS FTLFL GAVILGSQ+
Sbjct: 119 PPGRWLTGSFNLTSRFTLFLHHGAVILGSQD 149
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R + DFG VGDG TE F +AV+ + A ++GG QLNVP G WLT F LTS+
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 130 TLFLQKGAVILG 141
TLFL +G+ ILG
Sbjct: 140 TLFLAEGSEILG 151
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG VGDG T F +AV + A ++GG QLNVP G WLT F LTS+ TLFL
Sbjct: 78 NITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 135 KGAVILGSQELK 146
+GA ILG + K
Sbjct: 138 EGAEILGITDEK 149
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 56 ATCVAGLPGDQYLPK----RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQ 110
A C G+ P RK V I ++G VGDG S T F KAV + GG
Sbjct: 17 ALCACGVAASPSSPAGAGCRKHVARITEYGGVGDGRRSNTAAFAKAVADLSLRAGDGGAA 76
Query: 111 LNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
L VP+G WLTG F LTS+FTLFL GA IL SQ L+
Sbjct: 77 LVVPKGKWLTGPFNLTSHFTLFLDHGAEILASQNLE 112
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R S+ DFG VGDGTTS T FR AV ++ + +GG L VP G WLTG F LTS
Sbjct: 8 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 67
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTL+L + AVILGSQ++
Sbjct: 68 HFTLYLHQDAVILGSQDV 85
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 50 GALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGG 108
A+++ TC + + +Y R +S+ DFG VGDG T T+ FR AV +Q +GG
Sbjct: 52 AAIYSTTTC-SNIVSLRYRSDR---ISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGG 107
Query: 109 TQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
T L VP G++LT SF LTS+ TL+L GAVI +QEL
Sbjct: 108 TVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQEL 144
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 66 QYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFG-DKGGTQLNVPEGLWLTGS 122
Q LP+ R VV +KDFG VGDG T TE F +AV + + GG QLNVP G WLT
Sbjct: 77 QPLPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAP 136
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
F LTS+ TLFL + + ILG ++ K
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEDEK 160
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYV-QAFGDKGGTQLNVPEGLWLTGSFILTSN 128
RK V I ++G VGDG T T F +AV + + D GG L VPEG WLTG F LTS+
Sbjct: 39 RKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTSH 98
Query: 129 FTLFLQKGAVILGSQEL 145
FTLFL +GA IL SQ+L
Sbjct: 99 FTLFLHRGAEILASQDL 115
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R S+ DFG VGDGTTS T FR AV ++ + +GG L VP G WLTG F LTS
Sbjct: 48 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 107
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTL+L + AVILGSQ++
Sbjct: 108 HFTLYLHQDAVILGSQDV 125
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R S+ DFG VGDGTTS T FR AV ++ + +GG L VP G WLTG F LTS
Sbjct: 55 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 114
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTL+L + AVILGSQ++
Sbjct: 115 HFTLYLHQDAVILGSQDV 132
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R S+ DFG VGDGTTS T FR AV ++ + +GG L VP G WLTG F LTS
Sbjct: 75 RAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFNLTS 134
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTL+L + AVILGSQ++
Sbjct: 135 HFTLYLHQDAVILGSQDV 152
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 56 ATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVP 114
ATC +P L R +SI DFG VGDG T T+ FR A+ +Q +GGT L +P
Sbjct: 26 ATCSGIVP----LRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIP 81
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LT SF LTS+ TL+L KGAVI Q+
Sbjct: 82 PGVYLTESFNLTSHMTLYLAKGAVIRAVQD 111
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P + R V+SIKDFG VGDG T T+ FR A+ ++ +GGT L +P
Sbjct: 29 TCSGIVP----MRHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPP 84
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LT SF LTS+ TL+L K AVI +Q+
Sbjct: 85 GVYLTESFNLTSHMTLYLSKDAVIRATQD 113
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK-GGTQLNVPEGLWLTGSFILTSN 128
R VV ++ DFG +GDG T T F +AV + + K GG QLNVP G+WLT F LTS+
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 129 FTLFLQKGAVILGSQ 143
TLFL++ A IL +Q
Sbjct: 107 MTLFLEEDATILATQ 121
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK-GGTQLNVPEGLWLTGSFILTSN 128
R VV ++ DFG +GDG T T F +AV + + K GG QLNVP G+WLT F LTS+
Sbjct: 47 RPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSH 106
Query: 129 FTLFLQKGAVILGSQ 143
TLFL++ A IL +Q
Sbjct: 107 MTLFLEEDATILATQ 121
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P P+R +S+ FG GDG T T F +AV ++ GG +L VP
Sbjct: 29 TCSGTVPAP---PRRGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPP 85
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS TLFL +GAVI +Q+
Sbjct: 86 GVWLTGPFNLTSRMTLFLARGAVIRATQD 114
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI +FG VGD T T+ F+ A+ Y++ + DKGG +L VP G W TGSF L S+
Sbjct: 38 RPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAGRWFTGSFDLISHL 97
Query: 130 TLFLQKGAVILGSQE 144
TL L K AVILGS
Sbjct: 98 TLLLDKDAVILGSTN 112
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V ++ DFG VGDG T TE F +AV + KGG QLNVP G WLT F LTS
Sbjct: 79 RPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSFM 138
Query: 130 TLFLQKGAVILGSQE 144
TLFL + A IL Q+
Sbjct: 139 TLFLAEDAEILAVQD 153
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P P+R +S+ FG GDG T T F +AV ++ GG +L VP
Sbjct: 30 TCSGAVPAP---PRRGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPP 86
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS TLFL +GAV+ +Q+
Sbjct: 87 GVWLTGPFNLTSRMTLFLARGAVVRATQD 115
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R+ S+ DFG VGDG TS T FRKAV ++ + +GG L VP G WLT F LTS
Sbjct: 44 REHTASLTDFGGVGDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTS 103
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTLFL AVILG+Q++
Sbjct: 104 HFTLFLHADAVILGTQDV 121
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R +SI DFG VGDG T T+ FR+AV +Q +GGT L +P G++LT SF LTS+
Sbjct: 4 RNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTSHM 63
Query: 130 TLFLQKGAVILGSQE 144
TL+L +GAVI +Q+
Sbjct: 64 TLYLARGAVIKATQD 78
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 56 ATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVP 114
ATC +P L R +SI D+G VGDG T T+ FR A+ +Q +GGT L +P
Sbjct: 26 ATCSGIVP----LRYRYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIP 81
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LT SF LTS+ T +L KGAVI Q+
Sbjct: 82 PGVYLTESFNLTSHMTFYLAKGAVIRAVQD 111
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P D +P R MS+ FG VGDG T F +AV ++ +GG L VP G+WLTG
Sbjct: 38 PAD--VPPRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTG 95
Query: 122 SFILTSNFTLFLQKGAVILGSQE 144
F LTS+ TLFL +GAVI +Q+
Sbjct: 96 PFNLTSHMTLFLARGAVIRATQD 118
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P D +P R MS+ FG VGDG T F +AV ++ +GG L VP G+WLTG
Sbjct: 38 PAD--VPPRGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTG 95
Query: 122 SFILTSNFTLFLQKGAVILGSQEL 145
F LTS+ TLFL +GAVI +Q +
Sbjct: 96 PFNLTSHMTLFLARGAVIRATQAI 119
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 28 LSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGT 86
LS+ I L++ F +E ATC +P L R +SI ++G VGDG
Sbjct: 4 LSVSIFLFSCLAVSSSSFGDSE------ATCSGIVP----LRYRYDKISITEYGGVGDGR 53
Query: 87 TSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
T T+ FR A+ +Q +GGT L +P G++LT SF LTS+ TL+L KGAVI Q+
Sbjct: 54 TVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAKGAVIRAVQD 111
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 51 ALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT 109
A+ + TC +P + R +SI DFG +GDG T T FR A+ +Q +GGT
Sbjct: 21 AVADLTTCSGIVP----MKYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGT 76
Query: 110 QLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
L +P G++LT +F LTS+ TL+L KGAVI Q+
Sbjct: 77 LLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQD 111
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK V + ++G VGDG T T F +AV + GG L VP G WLTG F LTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 130 TLFLQKGAVILGSQELK 146
TL+L +GA IL SQ++K
Sbjct: 101 TLYLDEGAEILASQDMK 117
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P D +P+R +S+ FG VGDG T F +AV ++ +GG L VP G+WLTG
Sbjct: 38 PAD--VPRRGAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTG 95
Query: 122 SFILTSNFTLFLQKGAVILGSQE 144
F LTS+ TLFL +GAVI +Q+
Sbjct: 96 PFNLTSHMTLFLARGAVIRATQD 118
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 69 PKRKVVMSIKDFGV-GDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R MS+ FG GDG T T F +AV R + G +GGT L VP G+WLTG F LT
Sbjct: 32 PLRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTGPFNLT 91
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL +GAVI +Q+
Sbjct: 92 SHMTLFLARGAVIRATQD 109
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGDG T T+ FR+A+ VQ +GGT L VP G++LT F LTS+ TL+L
Sbjct: 43 ISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLTSHMTLYL 102
Query: 134 QKGAVILGSQE 144
GAVI+ +Q+
Sbjct: 103 AAGAVIMATQD 113
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK V + ++G VGDG T T F +AV + GG L VP G WLTG F LTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 130 TLFLQKGAVILGSQELK 146
TL+L +GA IL SQ++K
Sbjct: 101 TLYLDEGAEILASQDMK 117
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK V + ++G VGDG T T F +AV + GG L VP G WLTG F LTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 130 TLFLQKGAVILGSQELK 146
TL+L +GA IL SQ++K
Sbjct: 101 TLYLDEGAEILASQDMK 117
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK V + ++G VGDG T T F +AV + GG L VP G WLTG F LTS F
Sbjct: 41 RKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 130 TLFLQKGAVILGSQELK 146
TL+L +GA IL SQ++K
Sbjct: 101 TLYLDEGAEILASQDMK 117
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 65 DQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSF 123
+++L R +S+ DFG VG G T F+ A+ Y+++F DKGG Q NVP G WLT S
Sbjct: 59 NKHLKPRPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSI 118
Query: 124 ILTSNFTLFLQKGAVILGSQEL 145
T +T+ L+K AVIL S++
Sbjct: 119 NFTCTYTV-LEKDAVILASEDF 139
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++SI DFG VGDG T +E F KA+ YV +KGG ++ VP G+WLTG I+ SN L
Sbjct: 61 LMVSIVDFGAVGDGVTDNSEAFAKAIDYVS---EKGGGRVIVPRGIWLTGPIIMKSNIDL 117
Query: 132 FLQKGAVI 139
+Q+GAV+
Sbjct: 118 HVQQGAVV 125
>gi|255645539|gb|ACU23264.1| unknown [Glycine max]
Length = 126
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L R +SI +FG VGDG T T+ FR+A+ VQ +GGT L VP G++LT F LT
Sbjct: 36 LGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLT 95
Query: 127 SNFTLFLQKGAVILGSQ 143
S+ TL+L GAVI+ +Q
Sbjct: 96 SHMTLYLAAGAVIMATQ 112
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK V + ++G VGDG T T F KAV + GG L VP G WLTG F LTS F
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 130 TLFLQKGAVILGSQEL 145
TL+L +GA IL SQ++
Sbjct: 101 TLYLDEGAEILASQDM 116
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT--QLNVPEGLWLTGSFILTS 127
R+ S+ +FG VGDGTTS T FR AV ++ + GG L VP G WLT F LTS
Sbjct: 69 REHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTS 128
Query: 128 NFTLFLQKGAVILGSQEL 145
+FTLFL AVIL SQ +
Sbjct: 129 HFTLFLHSDAVILASQNI 146
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 66 QYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT-QLNVPEGLWLTGS 122
Q +P+ R VV +KDFG VGDG T TE F +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 123 FILTSNFTLFLQKGAVILGSQE 144
F LTS+ TLFL + + ILG +E
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEE 158
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ DFG VGDGT TE F +A+ A KGG +L VP G+W TG +L SN L +
Sbjct: 50 VNLSDFGAVGDGTQLCTEAFARAI---DALSQKGGGRLTVPAGVWFTGPIVLKSNINLHV 106
Query: 134 QKGAVILGSQEL 145
+KGAVIL S ++
Sbjct: 107 EKGAVILFSPDI 118
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG +GDG++ T F KA+ A KGG +L VP+G+W TG +L SN L L
Sbjct: 49 VNLKDFGAIGDGSSLCTTAFAKAI---DALTQKGGGKLIVPQGVWFTGPIVLKSNINLHL 105
Query: 134 QKGAVILGSQE 144
+KGAVIL S +
Sbjct: 106 EKGAVILFSPD 116
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 66 QYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT-QLNVPEGLWLTGS 122
Q +P+ R VV +KDFG VGDG T TE F +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
F LTS+ TLFL + + ILG ++ K
Sbjct: 137 FYLTSHMTLFLAEDSEILGVEDEK 160
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG VGDG TE F KA+ A KGG +L VP G+W TG +L SN L +
Sbjct: 50 VNLKDFGAVGDGMHLCTEAFAKAI---DALDKKGGGKLTVPAGVWFTGPIVLKSNINLHI 106
Query: 134 QKGAVILGSQEL 145
+KGA++L S ++
Sbjct: 107 EKGAIVLFSPDV 118
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 15/89 (16%)
Query: 68 LPKRKV-----------VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
+PKR V V +++FG VGDG T T F A+ A ++GG +L VP
Sbjct: 83 MPKRAVASLGHWAASPPVYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPA 139
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G WLT F LTS+ TLFL GA ILG Q+
Sbjct: 140 GRWLTAPFNLTSHMTLFLAAGAEILGIQD 168
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P RKV ++ DFG VG+G TE F KA+ A +KGG L VP G+W TG +L
Sbjct: 45 FPDRKV--NLADFGAVGNGEELCTEAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLK 99
Query: 127 SNFTLFLQKGAVILGS 142
SN L L+KGA+IL S
Sbjct: 100 SNIDLHLEKGAIILFS 115
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V+SI +FG VGDG T T RKAV +Q GT L +P G WL+GSF LTS+
Sbjct: 99 RPEVVSITEFGGVGDGRTLNTWALRKAVYRIQC-----GTTLLLPVGTWLSGSFNLTSHM 153
Query: 130 TLFLQKGAVILGSQELK 146
TLFL +GAV+ +Q+ +
Sbjct: 154 TLFLARGAVLKATQDTR 170
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++KDFG VGDGTT TE F KA+ ++GG +L VP G+W TG +L
Sbjct: 48 IPDRQV--NLKDFGAVGDGTTLCTEAFAKAI---DKLSEQGGGKLIVPGGVWFTGPIVLK 102
Query: 127 SNFTLFLQKGAVI 139
SN L L+ GAVI
Sbjct: 103 SNINLHLEVGAVI 115
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 66 QYLPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGT-QLNVPEGLWLTGS 122
Q +P+ R VV +KDFG VGDG T TE F +AV + G G QLNVP G WLT
Sbjct: 77 QPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAP 136
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
F LTS+ TLFL + + ILG ++ K
Sbjct: 137 FNLTSHMTLFLAEDSEILGVEDEK 160
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
+F DKGG QL VP G WLTGSF LTS+ TLFL+ GAVI+ SQ+
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQD 44
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC P PKR MSI FG GDG T T F AV + +GG L VP
Sbjct: 33 TCSGAAPAP---PKRGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPP 89
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GAVI +Q+
Sbjct: 90 GVWLTGPFSLTSHMTLFLARGAVIRATQD 118
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P RKV ++ DFG VG+G T F KA+ A +KGG L VP G+W TG +L
Sbjct: 45 FPDRKV--NLADFGAVGNGEELCTAAFAKAI---DALAEKGGGHLIVPAGVWFTGPIVLK 99
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L+KGAVIL S ++
Sbjct: 100 SNIDLHLEKGAVILFSPDV 118
>gi|359487180|ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
[Vitis vinifera]
Length = 1629
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
G GDG + F+ A+ ++ GG + VP G WLTGSF LTS+FTL++ K AVIL
Sbjct: 1544 GNGDGKKMKIKAFKSAIDHLSECASDGGAEPIVPPGKWLTGSFNLTSHFTLYVHKDAVIL 1603
Query: 141 GSQ 143
G Q
Sbjct: 1604 GGQ 1606
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 51 ALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGDKGG 108
+L P TC +P + R ++SI DFG VGDG T T+ F A+ R + G
Sbjct: 25 SLGAPITCSGIVP----MKHRNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEG 80
Query: 109 TQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
T L VP G++LT SF LTS+ TL+L GAVI Q+
Sbjct: 81 TLLYVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQD 116
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC P PKR MS+ FG GDG T T F AV + +GG L VP
Sbjct: 33 TCSGAAPAP---PKRGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPP 89
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GAVI +Q+
Sbjct: 90 GVWLTGPFSLTSHMTLFLARGAVIRATQD 118
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P KV +I FG VGDGTT +E F KA+ +A KGG L +P+G+W TG +L
Sbjct: 50 FPDYKV--TITQFGGVGDGTTLNSEAFAKAI---EALEKKGGGTLVIPQGIWYTGPIVLK 104
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN ++LQ GA+IL S +
Sbjct: 105 SNIHIYLQGGAIILFSDDF 123
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG VGDG T TE F AV + ++GG +L VP G WLT F LTS TLF
Sbjct: 110 VYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLF 166
Query: 133 LQKGAVILGSQE 144
L GA ILG Q+
Sbjct: 167 LAAGAEILGVQD 178
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG VGDG T T F A+ A ++GG +L VP G WLT F LTS+ LF
Sbjct: 102 VYDLREFGAVGDGRTVNTAAFESAI---AAIAERGGGRLTVPAGRWLTAPFNLTSHMILF 158
Query: 133 LQKGAVILGSQE 144
L GA ILG Q+
Sbjct: 159 LAAGAEILGIQD 170
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P KV S+ DFG VG+G TE F KA+ + +GG L VP G+WLTG +L
Sbjct: 44 FPDLKV--SLPDFGAVGNGVELCTEAFEKAI---ETLSSRGGGHLIVPAGIWLTGPIVLK 98
Query: 127 SNFTLFLQKGAVILGSQELK 146
SN L ++KGAV+L S +++
Sbjct: 99 SNIDLHIEKGAVVLFSPDVE 118
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI +FG V DG T TE F KA++ A +KGG ++ VP GLWLTG +L SN L+L+
Sbjct: 60 SITEFGAVADGITLNTEAFDKAIK---AVAEKGGGKVIVPAGLWLTGPIVLQSNINLYLE 116
Query: 135 KGAVIL 140
+ A++L
Sbjct: 117 ENALVL 122
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 51 ALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGDKGG 108
+L P TC +P + R ++SI DFG VGDG T T F A+ R + G
Sbjct: 25 SLGAPITCSGIVP----MKHRTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQG 80
Query: 109 TQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
T L+VP G++LT SF LTS+ TL+L GAVI Q+
Sbjct: 81 TLLHVPRGVYLTQSFNLTSHMTLYLADGAVIKAVQD 116
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
+F DKGG QL VP G WLTGSF LTS+ TLFL+ AVI+ SQ+
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQD 44
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK-GGTQLNVP 114
TC +P L R +S+ DFG VGDG T T+ FR+A+ + + GGT L VP
Sbjct: 30 TCSNIVP----LKYRTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLSQREGGTTLYVP 85
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G++LT F LTS+ TL L GAVI +Q+
Sbjct: 86 PGVYLTEPFNLTSHMTLHLAAGAVIKATQD 115
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG VGDG T TE F AV + ++GG +L VP G WLT F LT+ TLF
Sbjct: 110 VYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTNRMTLF 166
Query: 133 LQKGAVILGSQE 144
L GA ILG Q+
Sbjct: 167 LAAGAEILGVQD 178
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG VGDG T TE F AV + ++GG +L VP G WLT F LTS TLF
Sbjct: 10 VYDLREFGGVGDGRTLNTEAFVAAV---ASIAERGGGRLVVPAGRWLTAPFNLTSRMTLF 66
Query: 133 LQKGAVILGSQELK 146
L GA ILG Q+ +
Sbjct: 67 LAAGAEILGVQDER 80
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
TC +P PKR +S+ FG GDG T T F AV ++ GG L VP
Sbjct: 31 TCSGAVPAP---PKRGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPP 87
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GAVI +Q+
Sbjct: 88 GVWLTGPFNLTSHMTLFLSRGAVIRATQD 116
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P RKV ++ DFG VG+G T F KA+ +KGG L VP G+W TG +L
Sbjct: 45 FPDRKV--NLADFGAVGNGEELCTAAFAKAI---DTLAEKGGGHLIVPAGVWFTGPIVLK 99
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L+KGAVIL S ++
Sbjct: 100 SNIDLHLEKGAVILFSPDV 118
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P KV SI DFG + DG T T+ F KA+ A +KGG L VP G+W TG +
Sbjct: 46 FPDNKV--SITDFGGIPDGITLNTDAFAKAM---DALSNKGGGTLFVPSGVWYTGPIVFK 100
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L+KGA+IL S +
Sbjct: 101 SNINLHLEKGALILFSADF 119
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R V ++ DFG VGDG + T F A+ ++ GG QL V G WLT F +TS+
Sbjct: 33 RPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHM 92
Query: 130 TLFLQKGAVILGSQE 144
TLFL +GA I+ Q+
Sbjct: 93 TLFLSRGATIVAIQD 107
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+KD+G VGDG T T F KA+ +GG LNVP G+WLTG +L N L L
Sbjct: 51 VSLKDYGAVGDGLTMNTRAFAKAM---ADLAKRGGGHLNVPAGIWLTGPIVLKDNIDLHL 107
Query: 134 QKGAVILGSQE 144
+ A+IL S +
Sbjct: 108 DRNALILFSPD 118
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG GDG TE F KA + +AF GGT + VPEG+W TG L SN L L++
Sbjct: 50 ITDFGAKGDGQFKNTEAFHKA--FAKAFSQGGGTVV-VPEGIWYTGPITLKSNINLHLKQ 106
Query: 136 GAVILGSQEL 145
GA+IL S +
Sbjct: 107 GALILFSDQF 116
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R V ++K+F VG+G T T F A+ A ++GG L VP G+WLTG +L
Sbjct: 55 FPDRTV--NLKEFNAVGNGETLCTSAFADAI---NALSEQGGGHLVVPAGVWLTGPIVLK 109
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L+KGAVIL S ++
Sbjct: 110 SNIDLHLEKGAVILFSPDV 128
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R V ++KDFG VG+G TE F A+ + +GG L VP G+W TG +L
Sbjct: 45 FPDRTV--NLKDFGAVGNGKDLCTEAFASAINTLSG---QGGGHLIVPAGVWFTGPIVLK 99
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L+KGAVIL S ++
Sbjct: 100 SNIDLHLEKGAVILFSPDV 118
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI DFG V DG T +T F KA+ V A KGG ++ VP G+WLTG +L SN L +
Sbjct: 74 VSITDFGAVSDGLTKSTAAFEKAIADVVA---KGGGKVIVPRGMWLTGPIVLKSNINLHV 130
Query: 134 QKGAVILGSQEL 145
+ GA++L S++
Sbjct: 131 EDGALVLFSKDF 142
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P KV + DFG VG+G T+ F KA+ + A +GG L VP G+WLTG +L
Sbjct: 44 FPSLKVFLP--DFGAVGNGVELCTDAFAKAIETLSA---RGGGYLIVPAGIWLTGPIVLK 98
Query: 127 SNFTLFLQKGAVILGSQELK 146
SN L ++KGAVIL S +++
Sbjct: 99 SNINLHIEKGAVILFSPDVE 118
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE KA++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 134 QKGAVILGS 142
+K A+I+ S
Sbjct: 115 EKNALIVFS 123
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE KA++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 134 QKGAVILGS 142
+K A+I+ S
Sbjct: 115 EKNALIVFS 123
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE KA++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 114
Query: 134 QKGAVILGS 142
+K A+I+ S
Sbjct: 115 EKNALIVFS 123
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE KA++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 52 VNICDFGAKSDGVTLNTEAINKAIKVVH---DKGGGKVIIPEGLWLTGPIVLQSNVNLHA 108
Query: 134 QKGAVILGS 142
+K A+I+ S
Sbjct: 109 EKNALIVFS 117
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+DFG + DG T TE A++ V + KGG ++ +PEGLWLTG +L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKTVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYT 115
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 116 EKNALIVFSSD 126
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+DFG + DG T TE A++ V + KGG ++ +PEGLWLTG +L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 116 EKNALIVFSSD 126
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG GDGT TE F KA+ A +GG +L VP G+WLTG L N L L
Sbjct: 48 VNLKDFGATGDGTAMNTEAFSKAI---SALNKQGGGRLVVPAGIWLTGLISLKDNIDLHL 104
Query: 134 QKGAVILGSQE 144
++ AVI+ S +
Sbjct: 105 ERNAVIVFSPD 115
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+DFG + DG T TE A++ V + KGG ++ +PEGLWLTG +L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVNS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 116 EKNALIVFSSD 126
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+DFG + DG T TE A++ V + KGG ++ +PEGLWLTG +L SN L+
Sbjct: 59 VNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLLSNVNLYA 115
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 116 EKNALIVFSSD 126
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFGVGDGT--TSTTEVFRKAVRYVQAFGDKGGTQLNVP 114
TC +P P+R MS+ FG G G T +T F+ AV ++ GG L VP
Sbjct: 27 TCSDMVPA---APRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVP 83
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GAVI +Q+
Sbjct: 84 PGVWLTGPFNLTSHMTLFLARGAVIRATQD 113
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 62 LPGDQYLPKRKVV----MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
LP + + +R V+ + + DFG GDG T +E F KA++Y+ + KGG +L VP+G
Sbjct: 32 LPFEMPVIERPVIPDLNICLTDFGGSGDGVTLNSEAFEKAIQYLAS---KGGGRLIVPQG 88
Query: 117 LWLTGSFILTSNFTLFLQKGAVILGSQE 144
+WLTG L +N L L ++++ SQ+
Sbjct: 89 VWLTGPIELENNVELHLSDNSIVVFSQD 116
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
GVGDG T TE FR+A+ ++ A KGG L VP G+WLTG L S+ L L+K A+++
Sbjct: 43 GVGDGITLNTECFREAIEHLSA---KGGGTLVVPTGIWLTGPIRLKSHIELHLEKNALLI 99
Query: 141 GSQEL 145
+ +
Sbjct: 100 FTSDF 104
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++IKDFG V DG T TE KA++ V A +GG ++ +P+GLWLTG L SN L+
Sbjct: 14 VNIKDFGAVADGKTLNTEAINKAIQKVSA---RGGGKVIIPQGLWLTGPIELQSNVNLYT 70
Query: 134 QKGAVILGS 142
++ ++IL S
Sbjct: 71 EENSLILFS 79
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI DFG VGDG ++ F +A+ V +KGG ++ VP GLWLTG I+ SN L L
Sbjct: 63 VSIVDFGAVGDGVFDNSDAFAQAIDNVS---EKGGGRVVVPRGLWLTGPIIMKSNIDLHL 119
Query: 134 QKGAVI 139
+ GAV+
Sbjct: 120 EDGAVV 125
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE A++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 58 VNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 114
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 115 EKNALIVFSSD 125
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T TE A++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 52 VNICDFGAKSDGVTLNTEAINNAIKVVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 108
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 109 EKNALIVFSSD 119
>gi|413936447|gb|AFW70998.1| hypothetical protein ZEAMMB73_666969 [Zea mays]
Length = 343
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 69 PKRKVVMSIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R+V S+++FG VGDG T T FR+AV + GG +L+VP G WLTGSF LT
Sbjct: 43 PAREVWASVEEFGAVGDGATPNTAAFRRAVVQLGARATGGGGARLDVPPGRWLTGSFNLT 102
Query: 127 SNFTLF 132
S FTLF
Sbjct: 103 SRFTLF 108
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNF 129
GG +L+VP G WLTGSF LTS F
Sbjct: 301 GGARLDVPPGRWLTGSFNLTSRF 323
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
G GDG TS TE FRKA+ + G G LNVP G++LTG N L L+K A+I+
Sbjct: 54 GKGDGITSNTEAFRKAISKLSKLG---GGHLNVPAGIYLTGLISFKDNIDLHLEKNAIIV 110
Query: 141 GSQELK 146
S++ K
Sbjct: 111 FSEDKK 116
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFGVGDGTTST--TEVFRKAVRYVQAFGDKGGTQLNVP 114
TC +P P+R MS+ FG G G T T F+ AV ++ GG L VP
Sbjct: 27 TCSDMVPA---APRRGAWMSLASFGGGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVP 83
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GAVI +Q+
Sbjct: 84 PGVWLTGPFNLTSHMTLFLARGAVIRATQD 113
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 45 FSGAEGALFNPATCVAGLPGDQ------YLPKRKVVMSIKDF-GVGDGTTSTTEVFRKAV 97
FS + A + LP D P R V ++ +F VG+G T T F A+
Sbjct: 16 FSACQSADYKYEAVYRNLPFDMPRVEAPRFPDRTV--NLAEFNAVGNGETLCTSAFADAI 73
Query: 98 RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
++GG L VP G+WLTG +L SN L L+KGAVIL S ++
Sbjct: 74 ---NTLSEQGGGHLVVPAGVWLTGPIVLKSNIDLHLEKGAVILFSPDV 118
>gi|198275291|ref|ZP_03207822.1| hypothetical protein BACPLE_01450 [Bacteroides plebeius DSM 17135]
gi|198271874|gb|EDY96144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 511
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
VGDG T T+ + A+ + A KGG QL P G +LTGS L SN TL+L+K AV+L
Sbjct: 31 AVGDGKTLNTQSLQSAIDALHA---KGGGQLYFPAGRYLTGSLQLKSNVTLYLEKEAVLL 87
Query: 141 GS 142
GS
Sbjct: 88 GS 89
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G +P R S+ D+G VGDG T TE F KA+ A GG ++ +P G+WLTG
Sbjct: 19 GQPSIPDRS--FSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGP 73
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
L S L Q GA++L S+ +
Sbjct: 74 LSLASRLDLHAQAGALVLFSRRFE 97
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ I+DFG DG T TE A++ A +KGG ++ +PEGLWLTG +L +N L +
Sbjct: 58 VDIRDFGAKADGETLNTEAINNAIK---AVSEKGGGKVVIPEGLWLTGPVVLQNNVNLHV 114
Query: 134 QKGAVILGS 142
+K A++L S
Sbjct: 115 EKNALVLFS 123
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++DFG VG+G TE F+KA+ +A ++GG + VP G++LTG L SN TL++
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAI---EASWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 134 QKGAVILGSQEL 145
+ GA + S +L
Sbjct: 60 ESGATLKFSNDL 71
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I DFG +GDG T +E F ++ V A GG ++ V G+WLTG + SN L+
Sbjct: 57 VVNISDFGAIGDGITDNSEAFAASIDDVAA---NGGGKVVVSRGIWLTGPIKMKSNINLY 113
Query: 133 LQKGAVILGSQEL 145
L+ GAV+L S +
Sbjct: 114 LEDGAVVLFSSDF 126
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 65 DQY--------LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
DQY LP R +I D+G VGD T T VF K V V A GD ++ +P
Sbjct: 38 DQYPSSTTPITLPVRSKSFNIVDYGAVGDNVTVNTAVFNKIVALVAANGDG---EIYIPP 94
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGS 142
G++++G+F LTS+ TL L GAV+ GS
Sbjct: 95 GIFVSGTFNLTSHVTLRLASGAVLAGS 121
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R S+ D+G VGDG T TE F KA+ A GG ++ +P G+WLTG L
Sbjct: 23 IPDRS--FSVTDYGAVGDGVTDNTEAFHKAI---AACSQAGGGRVVIPAGVWLTGPLSLA 77
Query: 127 SNFTLFLQKGAVILGSQELK 146
S L Q GA++L S+ +
Sbjct: 78 SRLDLHAQAGALVLFSRRFE 97
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI + G V DG T TE F KA+ A KGG ++ VP G+WLTG SN L L
Sbjct: 60 LSILEHGAVSDGVTKNTEAFAKAI---DAVASKGGGKVLVPRGIWLTGPIQFKSNINLHL 116
Query: 134 QKGAVILGSQEL 145
+ GA+IL S++
Sbjct: 117 EAGALILFSKDF 128
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG +G T TE A++ V DKGG ++ +PEGLWLTG +L SN L
Sbjct: 59 VNICDFGAKSNGVTLNTEAINNAIKAVH---DKGGGKVVIPEGLWLTGPIVLQSNVNLHA 115
Query: 134 QKGAVILGSQE 144
+K A+I+ S +
Sbjct: 116 EKNALIVFSSD 126
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P KV I DFG +GDG T+ F KA+ A KGG L VP G+WLTG
Sbjct: 42 FPDNKV--KITDFGGIGDGIYLNTQAFSKAI---DALSAKGGGMLTVPAGIWLTGPIQFK 96
Query: 127 SNFTLFLQKGAVILGSQE 144
SN L L+ A+IL S +
Sbjct: 97 SNINLHLEDRAIILFSPD 114
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK + DFG +GDG T T F+KA+ +GG ++ VP+G++LTG+ L SN
Sbjct: 47 RKKDYLVTDFGAIGDGKTKNTGAFKKAIEKCNV---EGGGRVVVPKGIFLTGAIYLKSNV 103
Query: 130 TLFLQKGAVILGSQE 144
L + +GA IL SQ+
Sbjct: 104 DLHISEGATILFSQD 118
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI FG GDGTT T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VSILQFGAKGDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVIL 140
+K A+++
Sbjct: 115 EKNALVV 121
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG VGDG T T F AV + ++GG +L VP G WLT F LTS+ TLF
Sbjct: 114 VYDLREFGGVGDGRTLNTAAFEAAVAAIS---ERGGGRLTVPAGRWLTAPFNLTSHMTLF 170
Query: 133 LQKGAVILGSQE 144
L GA ILG Q+
Sbjct: 171 LAAGAEILGVQD 182
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG VGD T E F +A+ V +KGG ++ VP G+WLTG + SN L L
Sbjct: 59 VSIVEFGAVGDAVTPNGEAFTRAIEQVS---EKGGGRVIVPRGIWLTGPIQMKSNINLHL 115
Query: 134 QKGAVI 139
+ GAVI
Sbjct: 116 EDGAVI 121
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T TE FR A+ A +GG ++ VP G++LTG+ L SN L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPHGVFLTGAIYLKSNVNLHLT 113
Query: 135 KGAVILGSQE 144
G IL S++
Sbjct: 114 DGTTILFSRD 123
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T TE FR A+ A +GG ++ VP G++LTG+ L SN L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIEKCHA---EGGGRVVVPNGVFLTGAIYLKSNVNLHLT 113
Query: 135 KGAVILGSQE 144
G IL S++
Sbjct: 114 DGTTILFSRD 123
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R+V SI D+ V G S T +A+ + G GGT +NVPEG+WLTG L
Sbjct: 11 FPDRQV--SITDYKAVSGGIESNTAAINQAITELSKLG--GGT-VNVPEGIWLTGPITLK 65
Query: 127 SNFTLFLQKGAVI 139
SN L L+KGA+I
Sbjct: 66 SNINLHLEKGALI 78
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I DFG V DG T TE F+KAV+ + + GG + VP G +LTG L SN L
Sbjct: 6 VFNITDFGAVPDGKTLCTEAFKKAVKKCE---EAGGGTIYVPAGKFLTGPIHLVSNTNLH 62
Query: 133 LQKGAVILGSQELK 146
+ GAV+L SQ ++
Sbjct: 63 IDAGAVLLFSQNIE 76
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
GV G+ TE FRKA+ KGG +L VP G+WLTG L SN L +++GA I+
Sbjct: 55 GVAGGSVKNTEAFRKAI---DDLSKKGGGKLVVPRGMWLTGPIELKSNINLHVEEGAFII 111
Query: 141 GSQE 144
S++
Sbjct: 112 FSKD 115
>gi|302755730|ref|XP_002961289.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
gi|300172228|gb|EFJ38828.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
Length = 474
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 52 LFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQ 110
LF +G+P P R V +++D+G +G+G+T T + A+ + +K G++
Sbjct: 17 LFVSLISSSGVPN----PSRPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSK 72
Query: 111 --LNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+ VP G +LTG+ L SN TL + +GA ILGS
Sbjct: 73 SVVWVPPGSYLTGTLFLRSNMTLHIDRGAKILGS 106
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++FG +GDG T T F AV + ++GG +L VP G WLT F LTS TLF
Sbjct: 116 VYDLREFGGIGDGRTLNTAAFEAAVAAIS---ERGGGRLTVPAGRWLTAPFNLTSGMTLF 172
Query: 133 LQKGAVILGSQE 144
L GA ILG Q+
Sbjct: 173 LASGAEILGIQD 184
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVILGSQEL 145
+K A+I+ S +
Sbjct: 115 EKNALIVFSDDF 126
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVILGSQEL 145
+K A+I+ S +
Sbjct: 115 EKNALIVFSDDF 126
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 61 GLPGDQYLPKR------KVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNV 113
GLP D +PK ++ +S+ ++G +G+G T T+ F A+ ++GG L V
Sbjct: 32 GLPFD--IPKAVTPAIPELEVSLAEYGGIGNGMTLNTQAFAAAI---ADLSERGGGHLIV 86
Query: 114 PEGLWLTGSFILTSNFTLFLQKGAVIL 140
PEG+WLTG +L SN L + K A++L
Sbjct: 87 PEGIWLTGPIVLKSNIDLHVLKNAIVL 113
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I DFG VGDG T + A++ AFG ++ +P+G +LTG L SN TL
Sbjct: 83 VVNILDFGAVGDGNHVNTAFIQAAIQVCPAFG-----RVIIPKGTYLTGPLFLKSNITLE 137
Query: 133 LQKGAVILGSQE 144
L++G+V+LG +E
Sbjct: 138 LEEGSVLLGLKE 149
>gi|302803023|ref|XP_002983265.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
gi|300148950|gb|EFJ15607.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
Length = 472
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 52 LFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQ 110
LF +G+P +P R V +++D+G +G+G+T T + A+ + +K G++
Sbjct: 15 LFVSLISSSGVP----IPSRPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSK 70
Query: 111 --LNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+ VP G +LTG+ L SN TL + GA ILGS
Sbjct: 71 SVVWVPPGSYLTGTLFLRSNMTLHIDHGAKILGS 104
>gi|255531611|ref|YP_003091983.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344595|gb|ACU03921.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 518
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
+GDGTT TE +KA+ A GG ++ PEG +L+G+ +L N T+ ++ AV+LG
Sbjct: 36 IGDGTTLNTEAIQKAI---DACYQSGGGKVIFPEGRFLSGTIVLKDNITIHFERNAVLLG 92
Query: 142 SQELK 146
S +LK
Sbjct: 93 STDLK 97
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 134 QKGAVILGSQE 144
+K A++L S +
Sbjct: 118 EKNALVLFSAD 128
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 134 QKGAVILGSQE 144
+K A++L S +
Sbjct: 118 EKNALVLFSAD 128
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 134 QKGAVILGSQE 144
+K A++L S +
Sbjct: 118 EKNALVLFSAD 128
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 134 QKGAVILGSQE 144
+K A++L S +
Sbjct: 118 EKNALVLFSAD 128
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R + I DFG VGDG T TE F+KA+ +A + GG ++ VP G +LTG L
Sbjct: 63 FPERDFL--ITDFGAVGDGLTKNTEAFKKAI---EACHNNGGGRVVVPYGKFLTGGIYLK 117
Query: 127 SNFTLFLQKGAVILGSQE 144
SN L L A I+ S++
Sbjct: 118 SNVNLHLADSATIVFSRD 135
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++++++FG G+G TE F+KA+ + +GG + VP G++ TG L SN TL
Sbjct: 1 MIVNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHTGPIHLKSNMTL 57
Query: 132 FLQKGAVILGSQELK 146
+++ GAV+ SQ+++
Sbjct: 58 YIENGAVLKFSQDIE 72
>gi|374375482|ref|ZP_09633140.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373232322|gb|EHP52117.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 493
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG DG T + + + A+ Y+ GG +L EG +LTG+ L SN TL L+
Sbjct: 25 NIMDFGAKADGVTLNSAIIQHAIDYIT---QNGGGRLVFKEGRYLTGTIFLKSNVTLHLE 81
Query: 135 KGAVILGS 142
KGAV+ GS
Sbjct: 82 KGAVLFGS 89
>gi|238006852|gb|ACR34461.1| unknown [Zea mays]
Length = 187
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 69 PKRKVVMSIKDFGV-GDGTT-STTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R MS+ FG GDG T +T R R + G +GGT L VP G+WLTG F LT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL +GA++ +Q+
Sbjct: 98 SHMTLFLARGAIVRATQD 115
>gi|116623935|ref|YP_826091.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227097|gb|ABJ85806.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 523
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ I FG GDG T + KA+ A G GGT + P G WLTGS L SN TL
Sbjct: 22 VVDITTFGAKGDGKTQNRDAINKAIETAAAAG--GGT-VEFPAGTWLTGSLRLRSNVTLH 78
Query: 133 LQKGAVILGSQE 144
L +GAVI S +
Sbjct: 79 LDRGAVIEASSD 90
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 61 VNIIDFGAKPDGITLNTKAINDAIQQVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 117
Query: 134 QKGAVILGSQE 144
+K +++L S +
Sbjct: 118 EKNSLVLFSAD 128
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +FG GDG T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VSIVEFGAKGDGIMLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVILGSQELK 146
+ A+IL + + +
Sbjct: 115 EMNALILFTDDFE 127
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 75 MSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI +F GVG+ T T+ FR+A GGT L VP G++LT +F LTS+ TL+L
Sbjct: 67 ISITEFVGVGNERTLNTKTFREAFSTCHX---DGGTLLYVPPGVYLTETFHLTSHRTLYL 123
Query: 134 QKGAVILGSQE 144
G +I+ +Q+
Sbjct: 124 ATGTIIMATQD 134
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG GDG T+ A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 58 VNIVDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVIIPEGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVILGSQELK 146
+ A++L + + +
Sbjct: 115 EMNALVLFTDDFE 127
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R V++ DFG VGDG T+ FR R + A GG ++ VP G++LTG
Sbjct: 33 FPRRDFVVT--DFGAVGDGIMDCTDAFR---RVMMAANTAGGGRVVVPAGIYLTGPIHFK 87
Query: 127 SNFTLFLQKGAVILGSQELK 146
SN L++ K A + SQ+L+
Sbjct: 88 SNVNLYVSKEATVKFSQDLE 107
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTT-STTEVFRKAVRYVQAFGDKGGTQLNVP 114
TC +G P+R MS+ FG GDG T +T R R + G +GGT L VP
Sbjct: 31 TCWSGP-----APRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVP 85
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G+WLTG F LTS+ TLFL +GA++ +Q+
Sbjct: 86 PGVWLTGPFNLTSHMTLFLARGAIVRATQD 115
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI +FG V DG T TE F + + A +GG + VP GLWLTG +L SN L L+
Sbjct: 60 SITEFGAVADGITLNTEAFAQTI---DAVSQQGGGTVVVPAGLWLTGPIVLKSNINLHLE 116
Query: 135 KGAVIL 140
+ A++L
Sbjct: 117 ENALVL 122
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 33 TKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPK-----RKVVMSIKDF------G 81
T+ P + +G G L P + G G +P+ R V +DF
Sbjct: 5 TRLPRRRFLELAAAGTGGLLLWPGRLLDGPEGWALVPEILAHIRPPVFPERDFVLTRYGA 64
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
VGDG T T+ FR+A+ +A GG ++ VP G +LTG L SN L L GA +
Sbjct: 65 VGDGRTDCTDAFRQAI---EACHRAGGGRVVVPRGTFLTGPIHLASNVNLHLDDGATVRF 121
Query: 142 SQE 144
Q+
Sbjct: 122 KQD 124
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G VGDG T+ ++ F+ A+ V ++GG ++ VP G+WLTG L N L L+
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAIEEVS---NQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 135 KGAVILGSQ 143
G++I S+
Sbjct: 109 DGSLITFSK 117
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P +V S+ DFG GDG T TE F KA+ KGG L+VP G++LTG
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKAM---SELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 127 SNFTLFLQKGAVILGSQE 144
N L L K A+I+ S +
Sbjct: 99 DNIDLHLDKNAIIVLSPD 116
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P +V S+ DFG GDG T TE F KA+ KGG L+VP G++LTG
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKAM---SELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 127 SNFTLFLQKGAVILGSQE 144
N L L K A+I+ S +
Sbjct: 99 DNIDLHLDKNAIIVLSPD 116
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI FG DGTT T+ A++ V A KGG ++ +PEGLWLTG L SN L
Sbjct: 76 VSILQFGAKSDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLHT 132
Query: 134 QKGAVIL 140
+K A+++
Sbjct: 133 EKNALVV 139
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P +V S+ DFG GDG T TE F KA+ KGG L+VP G++LTG
Sbjct: 44 IPDNRV--SLPDFGGKGDGVTMNTEAFGKAM---SELSKKGGGHLDVPAGVYLTGMISFK 98
Query: 127 SNFTLFLQKGAVILGSQE 144
N L L K A+I+ S +
Sbjct: 99 DNIDLHLDKNAIIVLSPD 116
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P +V S+ DFG V DG T TE FRKA+ + G G L VP G++LTG L
Sbjct: 65 IPNNQV--SLTDFGAVPDGITLNTEAFRKAISKLTKLG---GGHLIVPAGIYLTGPISLK 119
Query: 127 SNFTLFLQKGAVILGSQELK 146
N + L++ A+IL S K
Sbjct: 120 DNIDIHLERNALILFSPNKK 139
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+PK V +IKDFG V G T+ F A+ A KGG ++ +P G+WLTG IL
Sbjct: 48 IPKNSV--NIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVIIPPGIWLTGPIILK 102
Query: 127 SNFTLFLQKGAVI 139
SN L ++GA+I
Sbjct: 103 SNIELHAERGALI 115
>gi|427385171|ref|ZP_18881676.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
gi|425727339|gb|EKU90199.1| hypothetical protein HMPREF9447_02709 [Bacteroides oleiciplenus YIT
12058]
Length = 495
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDK 106
A ALF C G+ G Y SI DFG DG T T + A+ Y+
Sbjct: 9 ALSALF---LCWTGVRGQDY--------SIMDFGAKPDGVTLNTHTIQYAIDYIHT---A 54
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG +L G +LTG+ L SN TL L +GAV+LGS
Sbjct: 55 GGGKLIFDTGNYLTGTIYLKSNVTLHLAQGAVLLGS 90
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK +I +G DG T T+ +A+ A G GGT L VP+GLW+TG +L SN
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICNAAG--GGTVL-VPKGLWVTGPIVLKSNV 331
Query: 130 TLFLQKGAVI 139
L L+KGA++
Sbjct: 332 NLHLEKGALL 341
>gi|375254270|ref|YP_005013437.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
gi|363408292|gb|AEW21978.1| hypothetical protein BFO_0490 [Tannerella forsythia ATCC 43037]
Length = 493
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DG T T +KA+ ++ DKGG +L G +LTG+ L SN TL L++GAV
Sbjct: 29 FGIRSDGATLNTRSIQKAIDHIH---DKGGGRLVFSVGRYLTGTIYLKSNVTLHLKEGAV 85
Query: 139 ILGS 142
+LGS
Sbjct: 86 LLGS 89
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 69 PKRKVVMSIKDFGV-GDGTT-STTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R MS+ FG GDG T +T R R + G +GGT L VP G+WLTG F LT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 127 SNFTLFLQKGAVILGSQE 144
S+ TLFL +GA++ +Q+
Sbjct: 98 SHMTLFLARGAIVRATQD 115
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG TE A++ V A KGG ++ +PEGLWLTG +L SN L+ ++ A+IL +
Sbjct: 67 DGKFLNTEAINNAIKAVNA---KGGGKVIIPEGLWLTGPIVLLSNVNLYTERNALILFTD 123
Query: 144 ELK 146
+ +
Sbjct: 124 DFE 126
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 72 KVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
K+ +SI+ +G V G T+ KA+ V KGG + +P G+WLTG L SN
Sbjct: 56 KLTVSIEKYGAVAGGLEKNTQAIEKAISEVS---KKGGGTVKIPRGIWLTGPITLKSNIN 112
Query: 131 LFLQKGAVILGSQELK 146
L L+ GA++L S+ +
Sbjct: 113 LHLEDGALLLFSKNFE 128
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG V G T+ F A+ A KGG +L +P G+WLTG IL SN L
Sbjct: 51 VNLKDFGAVNGGYVLNTKAFADAI---DALSKKGGGKLIIPPGIWLTGPIILKSNIELHA 107
Query: 134 QKGAVI 139
++GA+I
Sbjct: 108 ERGALI 113
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
G GDG T T+ F KA+ + G G LNVP G++LTG L N L L+K A+I+
Sbjct: 53 GNGDGLTMNTQAFAKAISKLNKMG---GGHLNVPAGIYLTGLISLKDNIDLHLEKNAIIV 109
Query: 141 GSQE 144
S++
Sbjct: 110 LSED 113
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++++++FG G+G TE F+KA+ + +GG + VP G++ G+ L SN TL
Sbjct: 1 MIVNVREFGAKGNGIDKVTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTL 57
Query: 132 FLQKGAVILGSQE 144
+++ GAV+ SQ+
Sbjct: 58 YIESGAVLKFSQD 70
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 69 PKRKVVMSIKDFGV-GDGTT-STTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R MS+ FG GDG T +T R R + G +GGT L VP G+WLTG F LT
Sbjct: 38 PRRGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLT 97
Query: 127 SNFTLFLQKGAVILGSQ 143
S+ TLFL +GA++ +Q
Sbjct: 98 SHMTLFLARGAIVRATQ 114
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+V+++ +FG G+G TE F++A+ +A GG + VP G++ TG L SN TL
Sbjct: 1 MVVNVVEFGAKGNGIDKDTEAFKRAI---EACEKHGGGTIFVPAGIYHTGPIHLKSNMTL 57
Query: 132 FLQKGAVILGSQELK 146
+++ GAV+ SQ+++
Sbjct: 58 YIENGAVLKFSQDIE 72
>gi|298377179|ref|ZP_06987133.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|298266163|gb|EFI07822.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
Length = 446
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++A +GG + +PEG +LTGS +L S LFL+
Sbjct: 37 NIVDFGAKGDGITDNTQFIN---RTIEACSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 94 SNAVVKGINNLE 105
>gi|150009066|ref|YP_001303809.1| glycoside hydrolase [Parabacteroides distasonis ATCC 8503]
gi|256841626|ref|ZP_05547132.1| glycoside hydrolase, family 28 [Parabacteroides sp. D13]
gi|423334607|ref|ZP_17312386.1| hypothetical protein HMPREF1075_03909 [Parabacteroides distasonis
CL03T12C09]
gi|149937490|gb|ABR44187.1| glycoside hydrolase family 28 [Parabacteroides distasonis ATCC
8503]
gi|256736520|gb|EEU49848.1| glycoside hydrolase, family 28 [Parabacteroides sp. D13]
gi|409225798|gb|EKN18716.1| hypothetical protein HMPREF1075_03909 [Parabacteroides distasonis
CL03T12C09]
Length = 446
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++A +GG + +PEG +LTGS +L S LFL+
Sbjct: 37 NIVDFGAKGDGITDNTQFIN---RTIEACSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 94 SNAVVKGINNLE 105
>gi|399028582|ref|ZP_10729769.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073673|gb|EJL64837.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 528
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 71 RKVVMSIKDFGV------GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
+K++ S K+F + DG T T +KA+ AF +KGG ++ P+G +L+GS I
Sbjct: 27 QKIIKSQKEFLITEYGSKADGKTINTIAIQKAID--AAFKNKGG-RVIFPKGKFLSGSII 83
Query: 125 LTSNFTLFLQKGAVILGSQELK 146
L SN TL+ ++G+V+LGS K
Sbjct: 84 LKSNVTLYFEEGSVLLGSTNPK 105
>gi|218259493|ref|ZP_03475216.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
gi|218225086|gb|EEC97736.1| hypothetical protein PRABACTJOHN_00874 [Parabacteroides johnsonii
DSM 18315]
Length = 494
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 58 CVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
CVA L Y DFGV DG T T +K + +V G G +L G
Sbjct: 16 CVASLSAKDYYAT--------DFGVIADGKTLNTNSIQKGIDFVNKLG---GGRLVFTAG 64
Query: 117 LWLTGSFILTSNFTLFLQKGAVILGS 142
+LTGS L SN TL L++GA +LGS
Sbjct: 65 NYLTGSIYLKSNVTLHLEEGATLLGS 90
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++++++FG G+G TE F+KA+ + +GG + VP G++ G+ L SN TL
Sbjct: 1 MIVNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTL 57
Query: 132 FLQKGAVILGSQE 144
+++ GAV+ SQ+
Sbjct: 58 YIESGAVLKFSQD 70
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+PK V +IKDFG V G T+ F A+ A KGG ++ +P G+WLTG IL
Sbjct: 50 IPKNTV--NIKDFGAVNGGYVLNTKAFADAI---DAVSKKGGGKVVIPPGIWLTGPIILK 104
Query: 127 SNFTLFLQKGAVI 139
SN L + GA+I
Sbjct: 105 SNLELHAETGALI 117
>gi|423342237|ref|ZP_17319951.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
gi|409218151|gb|EKN11123.1| hypothetical protein HMPREF1077_01381 [Parabacteroides johnsonii
CL02T12C29]
Length = 498
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 58 CVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
CVA L Y DFGV DG T T +K + +V G G +L G
Sbjct: 15 CVASLSAKDYYATDYYAT---DFGVIADGKTLNTNSIQKGIDFVNKLG---GGRLVFTAG 68
Query: 117 LWLTGSFILTSNFTLFLQKGAVILGS 142
+LTGS L SN TL L++GA +LGS
Sbjct: 69 NYLTGSIYLKSNVTLHLEEGATLLGS 94
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
++ ++ DFG G+G TE F+KA+ + GG + VP G++ G+ L SN TL
Sbjct: 1 MIYNVCDFGAKGNGVDKDTEAFKKAIEVCE---KNGGGTVYVPAGIYHVGALHLKSNMTL 57
Query: 132 FLQKGAVILGSQE 144
+++ GAV+ SQ+
Sbjct: 58 YIESGAVLKFSQD 70
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +G VG+G T F KA+ V GG ++ VP G+WLTG L SN L L
Sbjct: 55 VNITAYGAVGNGIEKNTAAFAKAIDEV---AQAGGGRVIVPRGIWLTGPVTLQSNINLHL 111
Query: 134 QKGAVILGSQEL 145
++GA++L S++
Sbjct: 112 EEGALVLFSRDF 123
>gi|410104858|ref|ZP_11299769.1| hypothetical protein HMPREF0999_03541 [Parabacteroides sp. D25]
gi|409233433|gb|EKN26270.1| hypothetical protein HMPREF0999_03541 [Parabacteroides sp. D25]
Length = 446
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++A +GG + +PEG +LTGS +L S LFL+
Sbjct: 37 NIVDFGAKGDGITDNTQFIN---RTIEACTLRGGGTVIIPEGTFLTGSILLRSKVNLFLE 93
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 94 SNAVVKGINNLE 105
>gi|393789553|ref|ZP_10377674.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
gi|392651001|gb|EIY44667.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDGTT+ T + +KA+ A GGT +NVP G +LTG+ + SN L L GA +LGS
Sbjct: 31 GDGTTNNTALIQKAIDDCSA--HNGGT-VNVPPGQFLTGTLFIKSNVNLHLDFGAELLGS 87
Query: 143 QEL 145
+L
Sbjct: 88 TDL 90
>gi|317475804|ref|ZP_07935061.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
gi|316907964|gb|EFV29661.1| hypothetical protein HMPREF1016_02043 [Bacteroides eggerthii
1_2_48FAA]
Length = 467
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG GDG T T R R + +KGG ++ +P+G ++TG+ L SN TL L+
Sbjct: 23 SVSDFGARGDGKTVNT---RAIQRVIDLCAEKGG-KVIIPQGEFVTGTLFLKSNVTLRLE 78
Query: 135 KGAVILGSQEL 145
+GA +LGS L
Sbjct: 79 RGAHLLGSTNL 89
>gi|218129862|ref|ZP_03458666.1| hypothetical protein BACEGG_01443 [Bacteroides eggerthii DSM 20697]
gi|217987972|gb|EEC54297.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 467
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
S+ DFG GDG T T R R + +KGG ++ +P+G ++TG+ L SN TL L+
Sbjct: 23 SVSDFGARGDGKTVNT---RAIQRVIDLCAEKGG-KVIIPQGEFVTGTLFLKSNVTLRLE 78
Query: 135 KGAVILGSQEL 145
+GA +LGS L
Sbjct: 79 RGAHLLGSTNL 89
>gi|423226670|ref|ZP_17213135.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628197|gb|EIY22231.1| hypothetical protein HMPREF1062_05321 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 495
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 76 SIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG DG T T + A+ YV GG +L G +LTG+ L SN TL L
Sbjct: 26 SIMDFGAKPDGVTLNTHTIQYAIDYVHT---AGGGKLIFDAGNYLTGTIYLKSNVTLHLA 82
Query: 135 KGAVILGS 142
+GAV+LGS
Sbjct: 83 QGAVLLGS 90
>gi|224537414|ref|ZP_03677953.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520940|gb|EEF90045.1| hypothetical protein BACCELL_02292 [Bacteroides cellulosilyticus
DSM 14838]
Length = 495
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 76 SIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG DG T T + A+ YV GG +L G +LTG+ L SN TL L
Sbjct: 26 SIMDFGAKPDGVTLNTHTIQYAIDYVHT---AGGGKLIFDAGNYLTGTIYLKSNVTLHLA 82
Query: 135 KGAVILGS 142
+GAV+LGS
Sbjct: 83 QGAVLLGS 90
>gi|354603313|ref|ZP_09021312.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
gi|353349190|gb|EHB93456.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
Length = 497
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG DG T T ++A+ A ++GG +L G +LTGS L SN TL L++
Sbjct: 27 VSDFGAKADGITLNTGAIQRAI---DAVNERGGGRLVFGPGKYLTGSIYLKSNVTLHLER 83
Query: 136 GAVILGS 142
GAV+LGS
Sbjct: 84 GAVLLGS 90
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI FG DG T+ +A++ V A KGG ++ +PEGLWLTG L SN L+
Sbjct: 57 ISIVAFGAQNDGKFLNTKAINEAIKAVHA---KGGGKVVIPEGLWLTGPIELLSNVNLYT 113
Query: 134 QKGAVILGSQELK 146
++ A+IL + + +
Sbjct: 114 ERNAMILFTDDFE 126
>gi|354603309|ref|ZP_09021308.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
gi|353349186|gb|EHB93452.1| hypothetical protein HMPREF9450_00223 [Alistipes indistinctus YIT
12060]
Length = 495
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG V DGTT T ++A+ + ++GG +L P G +++G+ L S TL L+
Sbjct: 26 VSDFGAVADGTTLNTRALQRAIDVIH---EEGGGKLIFPLGRYVSGTLHLLSGVTLHLES 82
Query: 136 GAVILGS 142
GAV+LGS
Sbjct: 83 GAVLLGS 89
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG GDG T+ A++ V A KGG ++ +P GLWLTG L SN L+
Sbjct: 58 VNIIDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVVIPGGLWLTGPIELLSNVNLYT 114
Query: 134 QKGAVILGSQELK 146
+ A+IL + + +
Sbjct: 115 EMNALILFTDDFE 127
>gi|255531484|ref|YP_003091856.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344468|gb|ACU03794.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 489
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ +G+T T +KAV Y+ +KGG L G +LTG+ L SN T+ L++GA+
Sbjct: 30 FGIKSNGSTMNTNSIQKAVNYIS---EKGGGTLRFYVGRYLTGTIQLKSNVTILLEEGAI 86
Query: 139 ILGSQEL 145
I+GS +
Sbjct: 87 IVGSTNI 93
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 55 PATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNV 113
PA A + LPK V ++++DFG VGDG T T ++ + G G ++ V
Sbjct: 37 PAKSSAKNHIESVLPKPVVKLNVRDFGAVGDGKTKDTLALQQTLDRCSLLG---GGEVFV 93
Query: 114 PEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
P G +LTG+ +L SN L L A +LGS ++
Sbjct: 94 PAGEYLTGALVLRSNTLLRLDGDASLLGSPDV 125
>gi|262383965|ref|ZP_06077101.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
gi|262294863|gb|EEY82795.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
Length = 446
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++A +GG + +PEG +LTGS +L S FL+
Sbjct: 37 NIVDFGAKGDGITDNTQFIN---RTIEACSLRGGGTVIIPEGTFLTGSILLKSKVNFFLE 93
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 94 SNAVVKGINNLE 105
>gi|418242061|ref|ZP_12868579.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|351778508|gb|EHB20659.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P R +++++DFGV DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSARPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|386310805|ref|YP_006006861.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551770|ref|ZP_20507811.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
gi|318607670|emb|CBY29168.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|431787439|emb|CCO70851.1| Exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica IP 10393]
Length = 623
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P R +++++DFGV DG T T+ ++A+ K
Sbjct: 150 ADGSL-----SVASKPITAKTSARPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----K 199
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 200 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 236
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 71 RKVVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+KV I D+G D T +TE RKA+ +A GG ++ VP+G +L+G L SN
Sbjct: 51 KKVDYKITDYGASLDSTVKSTEAIRKAI---EACHTNGGGRVIVPKGTFLSGPIHLKSNV 107
Query: 130 TLFLQKGAVILGSQEL 145
L L+ GA IL S+++
Sbjct: 108 NLHLEDGAKILFSRDV 123
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 105 DKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
+KGG +L VP G WLTGSF L S+ T+ L AVI+GSQ+
Sbjct: 44 NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQD 83
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++++FG G+G TE F+KA+ + +GG + VP G++ G+ L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 134 QKGAVILGSQE 144
+ GAV+ SQ+
Sbjct: 60 ESGAVLKFSQD 70
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++++FG G+G TE F+KA+ + +GG + VP G++ G+ L SN TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECE---KQGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 134 QKGAVILGSQE 144
+ GAV+ SQ+
Sbjct: 60 ESGAVLKFSQD 70
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V +GG ++ +PEG WLTG L SN L+
Sbjct: 59 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 115
Query: 134 QKGAVIL 140
++ A+IL
Sbjct: 116 ERNALIL 122
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T V ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRAMDQIAA---AGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 134 QKGAVILGSQEL 145
+ GAV++ SQ L
Sbjct: 60 EAGAVLIASQRL 71
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V +GG ++ +PEG WLTG L SN L+
Sbjct: 56 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 112
Query: 134 QKGAVIL 140
++ A+IL
Sbjct: 113 ERNALIL 119
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T V ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRAMDQIAA---AGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 134 QKGAVILGSQEL 145
+ GAV++ SQ L
Sbjct: 60 EAGAVLIASQRL 71
>gi|332159791|ref|YP_004296368.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664021|gb|ADZ40665.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 623
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P R +++++DFGV DG T T+ ++A+ K
Sbjct: 150 ADGSL-----SVASKPITAKTSARPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----K 199
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 200 PGCRVEIPVGTYKSGALWLKSDMTLNLQAGAILLGSE 236
>gi|146300860|ref|YP_001195451.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155278|gb|ABQ06132.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 509
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V IK +G VGDG T T+ +KA+ A KGG L +G +L+GS +L S+ LF
Sbjct: 23 VFDIKKYGAVGDGKTLNTKAIQKAID--AANKSKGGKVL-FSKGTFLSGSIVLKSDVELF 79
Query: 133 LQKGAVILGS 142
++GA++LGS
Sbjct: 80 FEEGAILLGS 89
>gi|330859829|emb|CBX70161.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica W22703]
Length = 608
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P R +++++DFGV DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSARPQIVNVRDFGVIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPVGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V +GG ++ +PEG WLTG L SN L+
Sbjct: 59 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 115
Query: 134 QKGAVIL 140
++ A+IL
Sbjct: 116 ERNALIL 122
>gi|307133005|ref|YP_003885021.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530534|gb|ADN00465.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 606
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ I +G G+GTT T +KA+ + G Q+NVP G++ TG+ L SN TL
Sbjct: 153 IIDITRYGAKGNGTTLNTSAIQKAIDACPS-----GCQVNVPAGVFKTGALWLKSNMTLN 207
Query: 133 LQKGAVILGSQ 143
L GA +LGS+
Sbjct: 208 LSPGATLLGSE 218
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P +P+R V SI FG GDG TE FR A+ QA GG ++ VP G + TG
Sbjct: 34 PRPAVIPQRSV--SILQFGGKGDGKALNTEAFRAAI---QACAKAGGGRVVVPPGTFRTG 88
Query: 122 SFILTSNFTLFLQKGAVILGS 142
L S+ L ++KGA+I S
Sbjct: 89 PIELASHVALIVEKGAIIQAS 109
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IKD+G V DGTT T F KA++ + GG ++ VP G +LTG+ L SN L L
Sbjct: 59 NIKDYGAVADGTTLNTGAFEKAIKEC---AENGGGKVIVPNGKYLTGAIHLESNVNLHLD 115
Query: 135 KGAVILGSQELK 146
A IL S K
Sbjct: 116 DNAEILFSTNPK 127
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 20 PIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATC--VAGLPGDQYLPKRKVVMSI 77
PI+ L + QI K VL L+ F + +NPA LP + + + +SI
Sbjct: 11 PIIYLGYHMMTQI-KTIVLGLKFALFGWFTLSSYNPAQAQTAPSLPSIKQVHVKADTISI 69
Query: 78 KDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
FG GDG + T+ +A+ KGG + +P G+W+TG L SN L +Q+
Sbjct: 70 VRFGAQGDGISLNTQSINRAIAETS---QKGGGVVLIPAGVWVTGPIELKSNINLHIQRD 126
Query: 137 AVIL 140
A++L
Sbjct: 127 AILL 130
>gi|9437305|emb|CAB99318.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ I +G G+GTT T +KA+ + G Q+NVP G++ TG+ L SN TL
Sbjct: 153 IIDITRYGAKGNGTTLNTSAIQKAIDACPS-----GCQVNVPAGVFKTGALWLKSNMTLN 207
Query: 133 LQKGAVILGSQ 143
L GA +LGS+
Sbjct: 208 LSPGATLLGSE 218
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+K +SI FG DG T TE K + +A +GG + +P+G+WLTG +L SN
Sbjct: 36 KKDTLSITQFGAKSDGLTLNTEAINKTI---EACSKQGGGVVLIPQGIWLTGPIVLKSNV 92
Query: 130 TLFLQKGAVI 139
L++ + A+I
Sbjct: 93 NLYVSRAALI 102
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++++K FG +GDG + T ++A+ V KGGT L VP G + T L S+ TL+
Sbjct: 131 MVNVKQFGAIGDGKSDDTRALQRAIDAVP----KGGT-LYVPAGTYYTAPLQLKSDMTLY 185
Query: 133 LQKGAVILGSQEL 145
L KGA +LGS +
Sbjct: 186 LAKGATLLGSSNI 198
>gi|301310833|ref|ZP_07216762.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|423339317|ref|ZP_17317058.1| hypothetical protein HMPREF1059_02983 [Parabacteroides distasonis
CL09T03C24]
gi|300830896|gb|EFK61537.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|409231219|gb|EKN24076.1| hypothetical protein HMPREF1059_02983 [Parabacteroides distasonis
CL09T03C24]
Length = 446
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++ +GG + +PEG +LTGS +L S LFL+
Sbjct: 37 NIVDFGAKGDGITDNTQFIN---RTIEDCSLRGGGTVIIPEGTFLTGSILLKSKVNLFLE 93
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 94 SNAVVKGINNLE 105
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
L G + +P + V + +G V +GTT T +KA+ A KGG ++ G +LT
Sbjct: 33 LVGSKKMPAKTTVFKVLAYGAVNNGTTLNTSAIQKAIDACSA---KGGGIVSFAPGKYLT 89
Query: 121 GSFILTSNFTLFLQKGAVILGSQEL 145
GS L N L + KG +LGSQ L
Sbjct: 90 GSIFLKKNVRLQIDKGVELLGSQNL 114
>gi|354595733|ref|ZP_09013750.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
gi|353673668|gb|EHD19701.1| Exo-poly-alpha-galacturonosidase [Brenneria sp. EniD312]
Length = 605
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +FG DG T T ++A+ K G +++VP G++ TG+ L S+ TL
Sbjct: 152 VVNINEFGAKADGNTLNTAAIQQAIDAC-----KPGCRVDVPRGIYKTGALWLKSDMTLN 206
Query: 133 LQKGAVILGS 142
LQ GAV+LGS
Sbjct: 207 LQDGAVLLGS 216
>gi|354603307|ref|ZP_09021306.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
gi|353349184|gb|EHB93450.1| hypothetical protein HMPREF9450_00221 [Alistipes indistinctus YIT
12060]
Length = 490
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ +GTT T +KA+ Y+ ++GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSNGTTMNTTAIQKAIDYIH---EQGGGRLVFYVGRYLTGSIELKSNVTIHLNEGAV 86
Query: 139 ILGS 142
+LGS
Sbjct: 87 LLGS 90
>gi|238798891|ref|ZP_04642357.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
gi|238717245|gb|EEQ09095.1| Exo-poly-alpha-D-galacturonosidase [Yersinia mollaretii ATCC 43969]
Length = 604
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++++DFG + DG T T+ ++A+ K G ++ +P G + +G+ L S+ TL
Sbjct: 152 IVNVRDFGAIADGKTLNTQAIQQAIDSC-----KPGCRVEIPSGTYKSGALWLKSDMTLH 206
Query: 133 LQKGAVILGSQ 143
LQ GA +LGS+
Sbjct: 207 LQAGATLLGSE 217
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IKDFG VGDG + T+ ++A+ +K G + VP+G++LTG+ S TL+++
Sbjct: 119 NIKDFGAVGDGKSLDTKAIQQAIDAC----NKQGIVV-VPKGVYLTGALFFKSYMTLYIE 173
Query: 135 KGAVILGSQEL 145
+GA++ GS +L
Sbjct: 174 EGAILKGSSDL 184
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G VGDGTT T+ + A+ QA + GG ++ +P G +LTG L SN L L+
Sbjct: 50 SIMDYGAVGDGTTDNTQAIKDAI---QACVEAGGGKVVIPAGKFLTGPIHLKSNVNLHLE 106
Query: 135 KGAVILGSQE 144
K + ++ +++
Sbjct: 107 KNSEVIFTKD 116
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I FG GDG T T+ A++ V +GG ++ +PEG WLTG L SN L+
Sbjct: 49 VNISKFGAKGDGMTLNTKAINDAIKEVN---QRGGGKVIIPEGTWLTGPIELLSNVNLYT 105
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 106 ERNALVL 112
>gi|325300385|ref|YP_004260302.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319938|gb|ADY37829.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 513
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
VGDG T T + A+ + A +GG L P G +LTGS L S TL L++GAV+L
Sbjct: 32 AVGDGKTLNTGSLQGAIDGLHA---RGGGVLRFPAGRYLTGSLRLKSGVTLHLEEGAVLL 88
Query: 141 GS 142
GS
Sbjct: 89 GS 90
>gi|189465208|ref|ZP_03013993.1| hypothetical protein BACINT_01553 [Bacteroides intestinalis DSM
17393]
gi|189437482|gb|EDV06467.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG T TT +KA+ +GG +++P G +LTG+ +L N TL L+KGA ILGS+
Sbjct: 23 DGKTLTTTGLQKAI---DDCARQGGGVVSLPAGKYLTGTLVLKKNVTLNLEKGATILGSK 79
Query: 144 EL 145
+
Sbjct: 80 NI 81
>gi|395804712|ref|ZP_10483947.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433100|gb|EJF99058.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 509
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V IK +G VGDG T T+ +KA+ A KGG L +G +L+GS +L SN LF
Sbjct: 23 VFDIKKYGAVGDGKTLNTKAIQKAID--AANKSKGGRIL-FSKGTFLSGSIVLKSNVELF 79
Query: 133 LQKGAVILGS 142
++ AV+LGS
Sbjct: 80 FEEDAVLLGS 89
>gi|238794289|ref|ZP_04637902.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
gi|238726373|gb|EEQ17914.1| Exo-poly-alpha-D-galacturonosidase [Yersinia intermedia ATCC 29909]
Length = 608
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++++DFG V DG T T+ ++A+ K G ++ +P G++ +G+ L S+ TL
Sbjct: 156 IVNVRDFGAVNDGNTLNTKAIQQAIDSC-----KPGCRVEIPAGIFKSGALWLKSDMTLN 210
Query: 133 LQKGAVILGSQ 143
LQ GA +LGS+
Sbjct: 211 LQAGATLLGSE 221
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IKD+G V DG T+ ++ + A++ A D GG ++ VP+G ++TG L SN L+
Sbjct: 52 NIKDYGAVNDGETNNSKAIKDAIK---ACNDAGGGKVIVPKGKYVTGPIHLLSNVNFHLE 108
Query: 135 KGAVILGSQELK 146
+GA IL +++ K
Sbjct: 109 EGAEILFTKDKK 120
>gi|427388103|ref|ZP_18883986.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
gi|425724686|gb|EKU87560.1| hypothetical protein HMPREF9447_05019 [Bacteroides oleiciplenus YIT
12058]
Length = 473
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG T TT +KA+ +GG +++P G +LTG+ +L N TL L+KGA ILGS+
Sbjct: 39 DGKTLTTAGLQKAI---DDCARQGGGVVSLPAGKYLTGTLVLKRNVTLNLEKGATILGSK 95
Query: 144 EL 145
+
Sbjct: 96 NI 97
>gi|238789354|ref|ZP_04633140.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
gi|238722497|gb|EEQ14151.1| Exo-poly-alpha-D-galacturonosidase [Yersinia frederiksenii ATCC
33641]
Length = 596
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++++DFG V DG T T+ ++A+ K G ++ +P G++ +G+ L S+ TL
Sbjct: 144 IVNVRDFGAVDDGKTLNTKAIQQAIDSC-----KPGCRIEIPAGIYKSGALWLKSDMTLN 198
Query: 133 LQKGAVILGSQ 143
LQ GA +LGS+
Sbjct: 199 LQAGATLLGSE 209
>gi|255015684|ref|ZP_05287810.1| glycoside hydrolase family protein [Bacteroides sp. 2_1_7]
Length = 423
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GDG T T+ R ++A +GG + +PEG +LTGS +L S LFL+
Sbjct: 14 NIVDFGAKGDGITDNTQFIN---RTIEACTLRGGGTVIIPEGTFLTGSILLRSKVNLFLE 70
Query: 135 KGAVILGSQELK 146
AV+ G L+
Sbjct: 71 SNAVVKGINNLE 82
>gi|413950434|gb|AFW83083.1| hypothetical protein ZEAMMB73_863996 [Zea mays]
Length = 472
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 90 TEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
T FR+AV GG +L+VP G WLTGSF LTS FTLFL +GAV
Sbjct: 4 TAAFRRAVAELGARAAGGGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAV 53
>gi|374374693|ref|ZP_09632351.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231533|gb|EHP51328.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 515
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ + D+G GDGTT T +KA+ A KGG + P G +++G+ +L +N TL L
Sbjct: 22 IKVTDYGAKGDGTTLNTVAIQKAIDACNA---KGGGHVIFPAGRYVSGTVLLKNNVTLQL 78
Query: 134 QKGAVILGSQELK 146
+K A I+GS ++
Sbjct: 79 EKDAWIIGSTDVN 91
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
++ ++ +FG G+G TE F+KA+ + GG + VP G++ G+ L SN TL
Sbjct: 1 MIYNVCNFGAKGNGVDKDTEAFKKAIEVCE---KNGGGTVYVPAGIYHIGALHLKSNMTL 57
Query: 132 FLQKGAVILGSQE 144
+++ GAV+ SQ+
Sbjct: 58 YIESGAVLKFSQD 70
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I D+G VGDG T+ F +A+ +A GG L +P G+WLTG L S L
Sbjct: 21 VTITDYGAVGDGVYDNTQAFHQAI---EACAKAGGGTLVIPPGIWLTGPIKLQSRIELHA 77
Query: 134 QKGAVILGSQ 143
GA ++ S+
Sbjct: 78 SAGAFVMFSK 87
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R +IK +G GDG + +T F+KA+ +A GG ++ VP G+++TG+ L
Sbjct: 44 FPNR--TFNIKRYGAAGDGKSDSTAAFKKAI---EAANKAGGGRVVVPPGIYVTGAIYLK 98
Query: 127 SNFTLFLQKGAVILGSQ 143
SN L + K A I SQ
Sbjct: 99 SNVNLHVMKKATIKFSQ 115
>gi|398384082|ref|ZP_10542136.1| endopolygalacturonase [Sphingobium sp. AP49]
gi|397723590|gb|EJK84083.1| endopolygalacturonase [Sphingobium sp. AP49]
Length = 526
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 41 RRVGFSGAEGALFNPATCVAGLPG-DQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVR 98
RR GA G + +A LP + LP+ +M+++DFG GDG+ + +A+
Sbjct: 7 RRFLLKGAAGI-----SMLAALPAFGRALPQG--IMNVRDFGAKGDGSHIDSPAIDRAIA 59
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
Y ++GG + VP G + + + L SN TL+L +GA +L +
Sbjct: 60 YA---AERGGGTVYVPPGSYASYTIHLKSNITLWLDRGATLLAA 100
>gi|3089553|gb|AAC15064.1| exopolygalacturonase [Yersinia enterocolitica]
Length = 601
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P + +++++DFG + DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|383752968|ref|YP_005431871.1| putative exo-poly-alpha-D-galacturonosidase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365020|dbj|BAL81848.1| putative exo-poly-alpha-D-galacturonosidase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 570
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 26 KILSLQITKKPVLSLRRVGFSGAEGALFNP---ATCVAGLPGDQYLPKRKVVMSIKDFG- 81
++ LQ K ++R V GAE N AT AG + + +G
Sbjct: 104 RVTGLQPGSKHSFTVRAVDAKGAESVDSNKLSTATLTAG-----------ARLDVTKYGA 152
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
VGDG+T T+ +KA+ A GGT + VP G + TGS L S+ TL +QK A +LG
Sbjct: 153 VGDGSTLNTQAIQKAIDACPA----GGTVV-VPAGNFKTGSLWLKSDMTLEVQKDATLLG 207
Query: 142 SQE 144
+++
Sbjct: 208 TED 210
>gi|420261144|ref|ZP_14763801.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511433|gb|EKA25311.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 608
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P + +++++DFG + DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|149243741|pdb|2UVE|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243742|pdb|2UVE|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase
gi|149243745|pdb|2UVF|A Chain A, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
gi|149243746|pdb|2UVF|B Chain B, Structure Of Yersinia Enterocolitica Family 28
Exopolygalacturonase In Complex With Digalaturonic Acid
Length = 608
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P + +++++DFG + DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|123440561|ref|YP_001004555.1| exo-poly-alpha-D-galacturonosidase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087522|emb|CAL10303.1| exo-poly-alpha-D-galacturonosidase precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 608
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 48 AEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDK 106
A+G+L VA P + +++++DFG + DG T T+ ++A+ K
Sbjct: 135 ADGSL-----SVASKPITAKTSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSC-----K 184
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G ++ +P G + +G+ L S+ TL LQ GA++LGS+
Sbjct: 185 PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSE 221
>gi|423346854|ref|ZP_17324542.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
gi|409219135|gb|EKN12099.1| hypothetical protein HMPREF1060_02214 [Parabacteroides merdae
CL03T12C32]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 79 DFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
DFGV DG T T +K + +V A +GG +L G + TG+ L SN TL L++GA
Sbjct: 28 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 84
Query: 138 VILGS 142
+LGS
Sbjct: 85 TLLGS 89
>gi|423725587|ref|ZP_17699703.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
gi|409234034|gb|EKN26865.1| hypothetical protein HMPREF1078_03592 [Parabacteroides merdae
CL09T00C40]
Length = 493
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 79 DFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
DFGV DG T T +K + +V A +GG +L G + TG+ L SN TL L++GA
Sbjct: 28 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 84
Query: 138 VILGS 142
+LGS
Sbjct: 85 TLLGS 89
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 76 SIKDFGVGDGT-TSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I D+G G+ T T+ F+KA+ G G ++ VP G WLTG L SN L+L
Sbjct: 65 NITDYGAESGSITKNTDAFKKAITECNKVG---GGRVVVPAGTWLTGPIELKSNVNLYLD 121
Query: 135 KGAVILGS 142
GA+++ S
Sbjct: 122 SGALVIFS 129
>gi|154490365|ref|ZP_02030626.1| hypothetical protein PARMER_00598 [Parabacteroides merdae ATCC
43184]
gi|154088976|gb|EDN88020.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 480
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 79 DFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
DFGV DG T T +K + +V A +GG +L G + TG+ L SN TL L++GA
Sbjct: 15 DFGVKADGKTLNTSSIQKGIDFVNA---QGGGRLVFTAGNYQTGTIYLKSNVTLHLEEGA 71
Query: 138 VILGS 142
+LGS
Sbjct: 72 TLLGS 76
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG VGDG+T ++ + A+ QA + GG ++ VP G + TG L SN L L+K
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAI---QACAEAGGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 136 GAVILGSQELK 146
A ++ S + K
Sbjct: 117 DARLMFSTDPK 127
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GDG T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 23 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 78 SNIELHV-KGTI 88
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GDG T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 21 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 76 SNIELHV-KGTI 86
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GDG T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 23 IPDREV--NLLDFGARGDGRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 78 SNIELHV-KGTI 88
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DFG DG T+ A++ V A GG ++ +PEG+WLTG L SN L+
Sbjct: 58 VNIVDFGGKNDGVALNTQAINDAIKAVNA---HGGGKVIIPEGIWLTGPIELLSNVNLYT 114
Query: 134 QKGAVIL 140
+K A+++
Sbjct: 115 EKNALVV 121
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V ++++DFG +GDG T TE + R + G GG ++ +P G +LTGS L + TL
Sbjct: 48 VQLNVRDFGAIGDGITLETESLQ---RTIDRCGVLGGGEVIIPAGRYLTGSVSLRTKVTL 104
Query: 132 FLQKGAVILGSQEL 145
L VILGS +L
Sbjct: 105 RLAAECVILGSPDL 118
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I +FG V DG T TE + A+ A G ++ VP+G ++TG+ L S TL++++
Sbjct: 60 ITEFGAVADGQTINTEAIQAAIDACTA-----GGKVVVPKGTFVTGAIFLKSRMTLYIEQ 114
Query: 136 GAVILGS 142
G V+LGS
Sbjct: 115 GGVLLGS 121
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 59 VAGLPGDQYLPK------RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQL 111
V+ P D LPK RK ++I G V DG T T KA+ G GG L
Sbjct: 19 VSASPAD--LPKVSVPTFRKDTIAISKLGAVADGLTLNTAAINKAIDQCTKAG--GGVVL 74
Query: 112 NVPEGLWLTGSFILTSNFTLFLQKGAVI 139
VP GLWLTG L SN L L KGA++
Sbjct: 75 -VPRGLWLTGPVTLKSNVNLHLAKGALL 101
>gi|222529558|ref|YP_002573440.1| glycoside hydrolase family protein [Caldicellulosiruptor bescii DSM
6725]
gi|222456405|gb|ACM60667.1| glycoside hydrolase family 28 [Caldicellulosiruptor bescii DSM
6725]
Length = 443
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG GDG + TEV +KA+ + GG + +P G++L+ L SN TL+L++
Sbjct: 5 VTDFGAKGDGVSFCTEVIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 61
Query: 136 GAVILGSQELK 146
GAVI + ++
Sbjct: 62 GAVIKATNNIE 72
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 58 CVAGLPGDQYLPKRKVVMS---------IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKG 107
C G+ P K+ +S I +FG V DG T TE + A+ A
Sbjct: 75 CSVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTINTEAIQAAIDACTA----- 129
Query: 108 GTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
G ++ VP+G ++TG+ L S TL++++G V+LGS
Sbjct: 130 GGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGS 164
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 58 CVAGLPGDQYLPKRKVVMS---------IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKG 107
C G+ P K+ +S I +FG V DG T TE + A+ A
Sbjct: 75 CSVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTLNTEAIQAAIDACTA----- 129
Query: 108 GTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
G ++ VP+G ++TG+ L S TL++++G V+LGS
Sbjct: 130 GGKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGS 164
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R SI DFG GDG T T RKA+ A +GG + VP G ++TG+ L
Sbjct: 52 FPDR--TFSILDFGARGDGKTDNTAAIRKAIETANA---RGGGHVVVPRGTFVTGAVYLK 106
Query: 127 SNFTLFLQKGAVI 139
S+ L L GAV+
Sbjct: 107 SDVDLHLAAGAVL 119
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 70 KRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+ K +++++DFG GDG T T + A+ + G ++ P G++LTG L SN
Sbjct: 80 EEKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSN 134
Query: 129 FTLFLQKGAVILGSQE 144
TL L K AV+LG+ +
Sbjct: 135 ITLELSKDAVLLGAND 150
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 70 KRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+ K +++++DFG GDG T T + A+ + G ++ P G++LTG L SN
Sbjct: 80 EEKFMVNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSN 134
Query: 129 FTLFLQKGAVILGSQE 144
TL L K AV+LG+ +
Sbjct: 135 ITLELSKDAVLLGAND 150
>gi|224137954|ref|XP_002322693.1| predicted protein [Populus trichocarpa]
gi|222867323|gb|EEF04454.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DFG +GDG TE + + +N P G++LT + L SN L +
Sbjct: 13 LSVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGIYLTATIHLKSNVVLNI 72
Query: 134 QKGAVILGSQELK 146
Q+GA +LG +L+
Sbjct: 73 QEGATLLGGTKLE 85
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IKDFG VGDG T T +KA+ + GG ++ P G +L+G+ L N TL +
Sbjct: 26 NIKDFGAVGDGITLNTLFIQKAI---DKCNNDGGGKVIFPAGRFLSGTVELKDNVTLHFE 82
Query: 135 KGAVILGSQELK 146
K A ++GS +LK
Sbjct: 83 KNAELVGSTDLK 94
>gi|271502414|ref|YP_003335440.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
gi|270345969|gb|ACZ78734.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
Length = 604
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +G GDGTT T +KA+ G +++VP G++ TG+ L SN TL
Sbjct: 153 VINITQYGAKGDGTTLNTSAIQKAIDACPT-----GCRIDVPAGIFKTGALWLKSNMTLN 207
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 208 LLQGATLLGS 217
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK +I +G DG T T+ +A+ G GGT L +PEGLWLTG +L SN
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAITRCSQAG--GGTVL-IPEGLWLTGPLVLRSNV 322
Query: 130 TLFLQKGAVI 139
L L GA++
Sbjct: 323 NLHLASGALL 332
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R +I D+G VGDG T TE FR A+ GG + VPEG +LTG+ L
Sbjct: 57 FPRR--TFTITDYGAVGDGQTMNTEAFRAAIADCHR---AGGGHVLVPEGRFLTGAIHLR 111
Query: 127 SNFTLFLQKGAVI 139
S L + +GA I
Sbjct: 112 SGVDLHVTEGATI 124
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG-LWLTGSFILTSNFTLFLQ 134
I DFG VGDG T E F KA+ D GG ++ VP G ++ G + SN + L+
Sbjct: 49 ITDFGAVGDGKTLCKEAFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 135 KGAVI 139
KGA++
Sbjct: 106 KGAIL 110
>gi|354603314|ref|ZP_09021313.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
gi|353349191|gb|EHB93457.1| hypothetical protein HMPREF9450_00228 [Alistipes indistinctus YIT
12060]
Length = 491
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ +GTT T +KA+ Y+ + +GG +L G +LTGS L SN T+ L +GAV
Sbjct: 27 FGIKSNGTTLNTSSIQKAIDYIHS---EGGGRLVFYVGRYLTGSINLRSNVTIQLNEGAV 83
Query: 139 ILGS 142
+LGS
Sbjct: 84 LLGS 87
>gi|154490368|ref|ZP_02030629.1| hypothetical protein PARMER_00601 [Parabacteroides merdae ATCC
43184]
gi|154088979|gb|EDN88023.1| polygalacturonase (pectinase) [Parabacteroides merdae ATCC 43184]
Length = 489
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DGTT T +KA+ ++ + GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 139 ILGS 142
++GS
Sbjct: 87 LVGS 90
>gi|238750651|ref|ZP_04612150.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
gi|238711041|gb|EEQ03260.1| Exo-poly-alpha-D-galacturonosidase [Yersinia rohdei ATCC 43380]
Length = 594
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++I+DFG + DG T T+ ++A+ K G ++++P G++ +G+ L S+ TL
Sbjct: 142 LVNIRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVDIPAGIYKSGALWLKSDMTLN 196
Query: 133 LQKGAVILGSQ 143
L+ GA +LGS+
Sbjct: 197 LEAGATLLGSE 207
>gi|423342234|ref|ZP_17319948.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
gi|409218148|gb|EKN11120.1| hypothetical protein HMPREF1077_01378 [Parabacteroides johnsonii
CL02T12C29]
Length = 489
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DGTT T +KA+ ++ + GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 139 ILGS 142
++GS
Sbjct: 87 LVGS 90
>gi|218259507|ref|ZP_03475220.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
gi|218225038|gb|EEC97688.1| hypothetical protein PRABACTJOHN_00878 [Parabacteroides johnsonii
DSM 18315]
Length = 489
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DGTT T +KA+ ++ + GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ENGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 139 ILGS 142
++GS
Sbjct: 87 LVGS 90
>gi|423725590|ref|ZP_17699706.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
gi|409234037|gb|EKN26868.1| hypothetical protein HMPREF1078_03595 [Parabacteroides merdae
CL09T00C40]
Length = 489
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DGTT T +KA+ ++ + GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ESGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 139 ILGS 142
++GS
Sbjct: 87 LVGS 90
>gi|423346857|ref|ZP_17324545.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
gi|409219138|gb|EKN12102.1| hypothetical protein HMPREF1060_02217 [Parabacteroides merdae
CL03T12C32]
Length = 489
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DGTT T +KA+ ++ + GG +L G +LTGS L SN T+ L +GAV
Sbjct: 30 FGIKSDGTTMNTRSIQKAIDFIS---ESGGGRLVFTVGRYLTGSIHLKSNVTIHLGEGAV 86
Query: 139 ILGS 142
++GS
Sbjct: 87 LVGS 90
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T + ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 3 LSLGDFHPVADGETPDTRILQQAIDQIAA---AGGGRLTLPPGRYRSGCLNLPSDFELHL 59
Query: 134 QKGAVILGSQEL 145
+ GAV++ S+ L
Sbjct: 60 EAGAVLVASRHL 71
>gi|238784759|ref|ZP_04628762.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
gi|238714355|gb|EEQ06364.1| Exo-poly-alpha-D-galacturonosidase [Yersinia bercovieri ATCC 43970]
Length = 608
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++++DFG + DG T T+ ++A+ K G ++ +P G + +G+ L S+ TL
Sbjct: 156 IVNVRDFGAIDDGKTLNTKAIQQAIDSC-----KPGCRVEIPSGTYKSGALWLKSDMTLN 210
Query: 133 LQKGAVILGSQ 143
LQ GA +LGS+
Sbjct: 211 LQAGATLLGSE 221
>gi|307133007|ref|YP_003885023.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306530536|gb|ADN00467.1| Exo-poly-alpha-D-galacturonosidase precursor [Dickeya dadantii
3937]
Length = 602
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +G GDGTT T +KA+ Q G ++++P G++ TG+ L S+ TL
Sbjct: 151 VINITQYGAKGDGTTLNTTAIQKAIDACQT-----GCRVDIPAGVFKTGALWLKSDMTLN 205
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 206 LLQGATLLGS 215
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLYLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ + DFG GDGTT + ++A+ A GGT + VP G +L GS + S TL
Sbjct: 34 IFKVSDFGAKGDGTTLDSPAIQRAI---DAASHSGGTVI-VPAGTYLCGSIFVKSGVTLQ 89
Query: 133 LQKGAVILGSQEL 145
++K A I GSQ++
Sbjct: 90 IEKDATIRGSQKI 102
>gi|9437307|emb|CAB99320.1| exo-poly-a-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +G GDGTT T +KA+ Q G ++++P G++ TG+ L S+ TL
Sbjct: 151 VINITQYGAKGDGTTLNTTAIQKAIDACQT-----GCRVDIPAGVFKTGALWLKSDMTLN 205
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 206 LLQGATLLGS 215
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 57 TCVAGLPGDQY--------------LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQ 101
T VAGL D + P R+ I +G VGDG T T FR A+R
Sbjct: 20 TTVAGLAQDPWERVPAILARIRPPTFPNRR--FDITRYGAVGDGVTKNTRAFRDAIR--- 74
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
A GG ++ VP G +LTG+ L S L +++G +L S +
Sbjct: 75 ACHRAGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTD 117
>gi|440286926|ref|YP_007339691.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
gi|440046448|gb|AGB77506.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
Length = 445
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
G T T V + + + GG L +P G+WLTG+ +L S+FTL L+ GA + S
Sbjct: 9 GLDNTGTRPVTAQLQQMIDTLAAAGGGTLTIPPGVWLTGTLVLPSHFTLHLEAGACLRAS 68
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 106
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 107 EQNALVL 113
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T V ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRAMDQIAA---AGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 134 QKGAVILGSQEL 145
+ GAV++ S L
Sbjct: 60 EAGAVLIASPRL 71
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 87 TSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
T T+ KA+ A + GG ++ VP G+WLTG + SN LFL+KGA+I
Sbjct: 2 TKNTDAINKAI---AACSENGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMI 51
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T V ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 4 LSLADFHPVADGETPDTAVLQRAMDQIAA---AGGGRLTLPAGRYRSGCLNLPSDFELHL 60
Query: 134 QKGAVILGSQEL 145
+ GAV++ S L
Sbjct: 61 EAGAVLIASPRL 72
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T V ++A+ + A GG +L +P G + +G L S+F L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRAMDQIAA---AGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 134 QKGAVILGSQEL 145
+ GAV++ S L
Sbjct: 60 EAGAVLIASPRL 71
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 57 TCVAGLPGDQY--------------LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQ 101
T VAGL D + P R+ I +G VGDG T T FR A+R
Sbjct: 35 TTVAGLAQDPWERVPAILARIRPPTFPNRR--FDITRYGAVGDGVTKNTRAFRDAIR--- 89
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
A GG ++ VP G +LTG+ L S L +++G +L S +
Sbjct: 90 ACHRAGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTD 132
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++DFG GDG+T T ++A+ G G ++ +P G +LTG L S TL L
Sbjct: 50 LNVRDFGATGDGSTLETASLQQALDRCNVLG---GGEVLIPAGRYLTGGLSLRSRVTLRL 106
Query: 134 QKGAVILGSQEL 145
K A +LGS +L
Sbjct: 107 DKDATLLGSPDL 118
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R+ I+D+G V G S TE A+R ++GG + VP GLWLTG + +
Sbjct: 19 REAQYDIRDYGAVAGGRVSNTEAINAAIRTCS---EEGGGHVIVPSGLWLTGPVRILTGV 75
Query: 130 TLFLQKGAVIL 140
L ++ GAV++
Sbjct: 76 DLHVENGAVLM 86
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG VGDG T + A+ A D G ++ PEG++LT L SN T+ L
Sbjct: 84 INVKDFGAVGDGKRIDTFSIQSAI---MACPDGG--RVYFPEGVYLTYPIFLKSNITIEL 138
Query: 134 QKGAVILGSQE 144
KGAV+LG++E
Sbjct: 139 GKGAVLLGAKE 149
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 75 MSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T F++A+ ++ A +GG L+VP G + G+ L SN L L
Sbjct: 3 LSLADFYPVADGETLDTSCFQRALDHLAA---RGGGTLSVPPGRYHLGTLSLGSNIHLHL 59
Query: 134 QKGAVILGSQELK 146
+ GA +L S ++
Sbjct: 60 EAGATLLASARVE 72
>gi|404406296|ref|ZP_10997880.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 635
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ I + G VGDG T T V + A+ A KGG + V +G+++TG+ L SN TL
Sbjct: 179 VVDIAEAGAVGDGATVNTAVLQAAIDKCSA--RKGGGTVWVRDGIYVTGTLQLKSNVTLR 236
Query: 133 LQKGAVILGS 142
++ GA++ GS
Sbjct: 237 VEAGAILRGS 246
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I +FG GD T TE A++ D GG L +P G +LTG L SN T++++
Sbjct: 4 NITEFGAKGDSNTDNTESISSAIKRC---ADSGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 135 KGAVIL 140
GA ++
Sbjct: 61 SGAKLV 66
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG V DG T T F+KA++ A GG ++ VP G +LTG+ L SN L L+
Sbjct: 72 NINDFGAVADGKTLNTLAFQKAIQECAA---NGGGRVLVPNGKYLTGAIHLESNVNLHLE 128
Query: 135 KGAVILGS 142
A IL S
Sbjct: 129 DHAEILFS 136
>gi|383110681|ref|ZP_09931500.1| hypothetical protein BSGG_1790 [Bacteroides sp. D2]
gi|423215185|ref|ZP_17201713.1| hypothetical protein HMPREF1074_03245 [Bacteroides xylanisolvens
CL03T12C04]
gi|382949458|gb|EFS31090.2| hypothetical protein BSGG_1790 [Bacteroides sp. D2]
gi|392692448|gb|EIY85686.1| hypothetical protein HMPREF1074_03245 [Bacteroides xylanisolvens
CL03T12C04]
Length = 470
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V I +G GDG T T A+ Y G GGT L +P+G +L+G+ L N +L
Sbjct: 30 VYDICKYGAKGDGKTLNTNAINSAIEYCAENG--GGTVL-IPKGTFLSGTIYLKDNISLV 86
Query: 133 LQKGAVILGSQEL 145
L+KGAV+ G+ ++
Sbjct: 87 LRKGAVLKGTADV 99
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG V DG T T F KA+ Q + GG ++ VP G +LTG+ L +N L L+
Sbjct: 59 NINDFGAVADGKTLNTAAFEKAI---QTCTENGGGKVLVPNGKYLTGAIHLENNVNLHLE 115
Query: 135 KGAVILGS 142
A IL S
Sbjct: 116 DKAEILFS 123
>gi|302811076|ref|XP_002987228.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
gi|300145125|gb|EFJ11804.1| hypothetical protein SELMODRAFT_125526 [Selaginella moellendorffii]
Length = 469
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
+ + V ++ DFG V DG T T + A+ Y A+ + + L+ P G +LTG+ L SN
Sbjct: 38 RHRWVCNVLDFGAVADGKTIDTSAIQSAIDYC-AWKARA-SSLHFPPGKYLTGALFLASN 95
Query: 129 FTLFLQKGAVILGS 142
+ + GA+ILGS
Sbjct: 96 MAVVIDPGAIILGS 109
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG-LWLTGSFILTSNFTLFLQ 134
I DFG VGDG T E F KA+ D GG ++ VP G ++ G + SN + L+
Sbjct: 49 ITDFGAVGDGKTLCKEPFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 135 KGAVI 139
KGA++
Sbjct: 106 KGAIL 110
>gi|255531483|ref|YP_003091855.1| endopygalactorunase [Pedobacter heparinus DSM 2366]
gi|255344467|gb|ACU03793.1| Endopygalactorunase [Pedobacter heparinus DSM 2366]
Length = 246
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DG T+ T + A+ ++ +KGG +LN G +LTG L SN T+ L +GAV+L
Sbjct: 31 VSDGVTNNTSSIQYAINFI---AEKGGGKLNFYVGRYLTGGIQLKSNVTIELHEGAVLLA 87
Query: 142 S 142
S
Sbjct: 88 S 88
>gi|255530629|ref|YP_003091001.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255343613|gb|ACU02939.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 559
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 51 ALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGT 109
AL A A +P Q +PK+ + +I+D+G GDG + T + A+ A G GGT
Sbjct: 25 ALGGAAMISATMP--QEIPKQDI-YNIRDYGAKGDGESLDTVAIQAAIDACNAAG--GGT 79
Query: 110 QLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+P G++L+G+ L SN T L G +LGS
Sbjct: 80 VF-IPTGVFLSGTLQLKSNVTFHLSAGGKLLGS 111
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKEVN---QRGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|402494826|ref|ZP_10841562.1| polygalacturonase [Aquimarina agarilytica ZC1]
Length = 465
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL-WLTGSFILTSNFTL 131
V ++ D+G VG+G T+ +KA+ A +GG ++ +P G L G+ L N TL
Sbjct: 23 VFNVLDYGAVGNGIQKDTQAVQKAIDMATA---QGGGKVIIPSGKKVLIGTIFLKDNVTL 79
Query: 132 FLQKGAVILGSQELK 146
+L+ GAV+LGS ++
Sbjct: 80 YLENGAVLLGSPTIE 94
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 107 EQNALVL 113
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 EQNALVL 123
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 107 EQNALVL 113
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V +GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QRGGGKVIIPEGVWLTGPIELLSNVNLYT 106
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 107 EQNALVL 113
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 70 KRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
K +S+KDFG VGDG T + AV + A G +L PEG +LTG L S+
Sbjct: 72 KETSAVSVKDFGAVGDGVADDTLSIQTAVNCLPA-----GGRLRFPEGTYLTGPINLKSH 126
Query: 129 FTLFLQKGAVILGSQEL 145
T+ + A +LG+ ++
Sbjct: 127 ITIEFTEKATLLGTTDM 143
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V GG ++ +PEG+WLTG L SN L+
Sbjct: 59 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 115
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 116 ERNALVL 122
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 75 MSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF + DG T T F++A+ ++ + +GG L+VP G + G+ L SN L L
Sbjct: 3 VSLADFYPIADGETLDTYCFQRALNHLAS---RGGGTLSVPPGRYHLGTLTLGSNINLHL 59
Query: 134 QKGAVILGSQELK 146
+ GA +L S ++
Sbjct: 60 EAGATLLASSRIE 72
>gi|359404678|ref|ZP_09197503.1| hypothetical protein HMPREF0673_00710, partial [Prevotella
stercorea DSM 18206]
gi|357560078|gb|EHJ41487.1| hypothetical protein HMPREF0673_00710, partial [Prevotella
stercorea DSM 18206]
Length = 252
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 73 VVMSIKDFG-VGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
+V+SI FG VG+ + + E +A+ + ++GG ++ VP G + TGS L S
Sbjct: 8 IVVSIASFGAVGNNESVNNAEAINRAIEHC---AEQGGGRVVVPCGEYYTGSIYLKSGVM 64
Query: 131 LFLQKGAVILGSQELK 146
LFL++GAV+ G Q++
Sbjct: 65 LFLEQGAVLKGVQDID 80
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V GG ++ +PEG+WLTG L SN L+
Sbjct: 59 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 115
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 116 ERNALVL 122
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ + DFG GDG+T T +KA+ A GT + P G +L+GS + S TL L
Sbjct: 27 VKVNDFGAKGDGSTMDTAAIQKAI---DAAAKSHGTVVFAP-GTYLSGSIFVKSGVTLQL 82
Query: 134 QKGAVILGSQELK 146
KG ILGSQ ++
Sbjct: 83 DKGVTILGSQRIE 95
>gi|129749|sp|P15922.1|PEHX_ERWCH RecName: Full=Exo-poly-alpha-D-galacturonosidase; Short=Exo-PG;
Flags: Precursor
gi|148447|gb|AAA24842.1| exo-poly-alpha-D-galacturonosidase [Erwinia chrysanthemi]
Length = 602
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +G GDGTT T +KA+ G +++VP G++ TG+ L S+ TL
Sbjct: 151 VINITQYGAKGDGTTLNTSAIQKAIDACPT-----GCRIDVPAGVFKTGALWLKSDMTLN 205
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 206 LLQGATLLGS 215
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G VGDG T F +A+ +A GG ++ +P G+W TG L S L
Sbjct: 22 ITDYGAVGDGVYDNTLAFHQAI---EACAKAGGGKVVIPPGIWHTGPLTLQSRIELHASA 78
Query: 136 GAVILGSQELK 146
GA+++ S++ +
Sbjct: 79 GALVMFSKQFE 89
>gi|373953148|ref|ZP_09613108.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889748|gb|EHQ25645.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 542
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IKDFG VGDG T T KA+ A G GGT L +P GLWLTG L SN L
Sbjct: 54 NIKDFGAVGDGQTLNTGAIAKAIAACSAAG--GGTVL-IPAGLWLTGPIELKSNINLHAD 110
Query: 135 KGAVILGSQE 144
GA+IL S +
Sbjct: 111 HGALILFSAD 120
>gi|251787803|ref|YP_003002524.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536424|gb|ACT05045.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 602
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I +G GDGTT T +KA+ G +++VP G++ TG+ L S+ TL
Sbjct: 151 VINITQYGAKGDGTTLNTSAIQKAIDACPT-----GCRIDVPAGVFKTGALWLKSDMTLN 205
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 206 LLQGATLLGS 215
>gi|427388349|ref|ZP_18884232.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
gi|425724932|gb|EKU87806.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
Length = 475
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I FG DG T +TE +KA+ A KGG ++ +P G ++TG+ L N TL ++
Sbjct: 23 NITSFGAKADGVTVSTEAIQKAIDESSA---KGG-RVIIPTGDFVTGTLFLKDNTTLVIE 78
Query: 135 KGAVILGSQEL 145
K A +LGS++L
Sbjct: 79 KNARLLGSKKL 89
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI FG GDG + TE KA+ A KGG + +P GLWLTG L SN L L+
Sbjct: 48 SIVSFGAKGDGVSMNTESINKAI---AAVSQKGGGVVLIPGGLWLTGPIELKSNVNLHLK 104
Query: 135 KGAVI 139
+ A++
Sbjct: 105 RDALL 109
>gi|116622096|ref|YP_824252.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225258|gb|ABJ83967.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 731
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+++DFG GDG T+ +A+ + G GG + +P G +L+G+ L N TL+L
Sbjct: 27 NVRDFGARGDGVALDTQAINRAI---EKCGIAGGGTVYLPPGTYLSGTVRLRDNITLWLD 83
Query: 135 KGAVILGSQEL 145
GA + G+++L
Sbjct: 84 SGATLRGTRDL 94
>gi|393785428|ref|ZP_10373579.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
gi|392662401|gb|EIY55961.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
LP + I G GDG T T +KA+ A KGGT + +P G +LT + L
Sbjct: 16 LPTFAYTVDITTLGAKGDGITDNTAFIQKAIDDCSA--RKGGT-VEIPSGHFLTRTLFLK 72
Query: 127 SNFTLFLQKGAVILGSQEL 145
SN L L GA +LGS +L
Sbjct: 73 SNVNLHLHFGAELLGSTDL 91
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DGTT T + A+ KGGT + VP G + T S L SN TL+L+KGAV+LG
Sbjct: 82 VADGTTDNTLKLQAALSTCP----KGGT-VYVPAGRYRTCSLFLKSNTTLYLEKGAVLLG 136
Query: 142 SQE 144
+
Sbjct: 137 DND 139
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R I D+G VGDG T T FR + A GG Q+ VPEG +LTG+ L
Sbjct: 63 FPRRS--FRITDYGAVGDGRTMNTAAFRATI---AACHRAGGGQVVVPEGRFLTGAIHLR 117
Query: 127 SNFTLFLQKGAVI 139
S L + GA I
Sbjct: 118 SRVNLHVTAGATI 130
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I+ FG VGDG + T ++AV +A GG + VP G+++TG+ L SN L
Sbjct: 7 VYNIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTVYVPAGVFVTGAIELKSNMHLH 63
Query: 133 LQKGAVILGSQE 144
L+ G+ +L S +
Sbjct: 64 LEAGSELLFSND 75
>gi|307133006|ref|YP_003885022.1| polygalacturonase [Dickeya dadantii 3937]
gi|306530535|gb|ADN00466.1| polygalacturonase [Dickeya dadantii 3937]
Length = 606
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I ++G GDGTT T +KA+ G ++++P G++ TG+ L S+ TL
Sbjct: 153 VINITEYGAKGDGTTLNTTAIQKAIDACPT-----GCRVDIPAGVFKTGALWLKSDMTLN 207
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 208 LLQGATLLGS 217
>gi|9437306|emb|CAB99319.1| polygalacturonase [Erwinia chrysanthemi]
Length = 606
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V++I ++G GDGTT T +KA+ G ++++P G++ TG+ L S+ TL
Sbjct: 153 VINITEYGAKGDGTTLNTTAIQKAIDACPT-----GCRVDIPAGVFKTGALWLKSDMTLN 207
Query: 133 LQKGAVILGS 142
L +GA +LGS
Sbjct: 208 LLQGATLLGS 217
>gi|302789251|ref|XP_002976394.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
gi|300156024|gb|EFJ22654.1| hypothetical protein SELMODRAFT_105243 [Selaginella moellendorffii]
Length = 469
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V ++ DFG V DG T T + A+ Y A+ + + L+ P G +LTG+ L SN +
Sbjct: 42 VCNVLDFGAVADGKTIDTSAIQSAIDYC-AWKARA-SSLHFPPGKYLTGAVFLASNMAVV 99
Query: 133 LQKGAVILGS 142
+ GA+ILGS
Sbjct: 100 IDPGAIILGS 109
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++ DFG GDGTT T +KA+ A K T + P G +LTGS L SN L L
Sbjct: 78 INASDFGAKGDGTTDDTNALQKAI---DATAAKKATLVLQP-GTYLTGSLFLKSNMALRL 133
Query: 134 QKGAVILGSQELK 146
KG + G Q ++
Sbjct: 134 DKGVTLTGKQNIE 146
>gi|336413111|ref|ZP_08593464.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
gi|335943157|gb|EGN04999.1| hypothetical protein HMPREF1017_00572 [Bacteroides ovatus
3_8_47FAA]
Length = 486
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 66 QYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
Q + R V I FG VGD T T+ + A+ + GG ++ VP G ++TG+
Sbjct: 29 QSIAARNV--EITQFGAVGDAATLNTKALQMAI---DTCAETGGGEVTVPPGTYITGTIY 83
Query: 125 LTSNFTLFLQKGAVILGS 142
L SN L L +G++I GS
Sbjct: 84 LRSNVELHLCRGSIIRGS 101
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R S+ DFG GDG T + +K + A +GG + VP+G ++TG+ L
Sbjct: 50 FPDR--TFSVLDFGAKGDGKTDNSAAIKKTIETANA---RGGGHVVVPKGTFVTGAVYLK 104
Query: 127 SNFTLFLQKGAVI 139
SN L L GAV+
Sbjct: 105 SNVDLHLDAGAVL 117
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 68 LPKRKVVMSIKDFGVGD-GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R + FG + G +TE +KA+ GG ++ VPEG++L+G+ L
Sbjct: 19 FPNRS--FDVTSFGADENGKNDSTEAIQKAIDQAHQ---AGGGRVTVPEGVFLSGALRLK 73
Query: 127 SNFTLFLQKGAVILGSQ 143
SN L + KGAVI SQ
Sbjct: 74 SNVDLHIAKGAVIKFSQ 90
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+ V + DFG +GDG T TE +KA+ + GG + G +L+GS + N
Sbjct: 79 KDTVYFVNDFGGIGDGKTINTEAIQKAI---DKCAENGGGTIAFKPGTYLSGSIFIKKNI 135
Query: 130 TLFLQKGAVILGSQEL 145
+ K ILGSQ++
Sbjct: 136 HFKIGKNVTILGSQDI 151
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF V DG T T F++A+ ++ +GG L VP G + G+ L S+ L L
Sbjct: 3 LSLADFHPVADGETLDTACFQRALDHLT---QRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 134 QKGAVILGSQELK 146
GA +L SQ ++
Sbjct: 60 AAGATLLASQRVE 72
>gi|255533858|ref|YP_003094230.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255346842|gb|ACU06168.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 543
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG V DG T T +KA+ K G ++ +P+G++L+G+ + SN L ++
Sbjct: 26 NILDFGAVRDGKTLNTAAIQKAIDECS----KKGGRVVIPKGVYLSGTLYMKSNVELHIE 81
Query: 135 KGAVILGSQELK 146
+GA++ GS K
Sbjct: 82 EGAILKGSASFK 93
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V GG ++ +PEG+WLTG L SN L+
Sbjct: 50 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 106
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 107 EQNALVL 113
>gi|242237658|ref|YP_002985839.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242129715|gb|ACS84017.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 605
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++I +G GDGTT T + A+ G ++++P G++ TG+ L S+ TL
Sbjct: 152 IINITHYGAKGDGTTLNTTAIQNAINACNT-----GCRIDIPAGVFKTGALWLKSDMTLN 206
Query: 133 LQKGAVILGSQ 143
L +GA +LGS+
Sbjct: 207 LMEGATLLGSE 217
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 68 LPK-RKVVMSIKDFGVGDGTTSTTEVFRKAVR-YVQAFGDKGGTQLNVPEGLWLTGSFIL 125
+PK +K ++I DFG +T E+ KA+ + + GG + +P GLW TG L
Sbjct: 51 IPKFKKDTLNIVDFG---AVPNTGELCTKAINDAIMKCSESGGGVVAIPSGLWTTGPIYL 107
Query: 126 TSNFTLFLQKGAVILGSQEL 145
SN L Q GA IL + +L
Sbjct: 108 KSNVNLHTQNGAYILFTSDL 127
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF DG T T V ++A+ + A GG +L +P G + +G L S+ L L
Sbjct: 3 LSLADFHPAADGETPDTAVLQRALDQIAA---AGGGRLTLPAGRYRSGCLNLPSDIELHL 59
Query: 134 QKGAVILGSQEL 145
GAV++ SQ+L
Sbjct: 60 DAGAVLIASQQL 71
>gi|433652543|ref|YP_007296397.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|433303076|gb|AGB28891.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 526
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
VGDGTT T ++ V V +GG ++ G +LTGSF + SN + +++GA ILG
Sbjct: 57 VGDGTTMNTAAIQQLVDRVSR---EGGGRIVFGHGRYLTGSFHMRSNVEVHVERGATILG 113
Query: 142 S 142
S
Sbjct: 114 S 114
>gi|340347659|ref|ZP_08670764.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
gi|339608853|gb|EGQ13736.1| polygalacturonase superfamily protein [Prevotella dentalis DSM
3688]
Length = 502
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
VGDGTT T ++ V V +GG ++ G +LTGSF + SN + +++GA ILG
Sbjct: 33 VGDGTTMNTAAIQQLVDRVSR---EGGGRIVFGHGRYLTGSFHMRSNVEVHVERGATILG 89
Query: 142 S 142
S
Sbjct: 90 S 90
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GD T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 21 IPNREV--NLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 76 SNIELHV-KGTI 86
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 77 IKDFGV----GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
I+DFG D T T+ KA+ A + GG + VP G WLTG L SN L
Sbjct: 68 IRDFGAKEMDADKTNKCTDAIHKAI---DAASESGGGTVLVPAGQWLTGPVHLKSNINLH 124
Query: 133 LQKGAVILGSQE 144
L+K A + S++
Sbjct: 125 LEKNASLFFSED 136
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G P ++ V ++ D+G GD + T +KA+ + G GG + P G++LTGS
Sbjct: 36 GAMSYPVQQAVYNVTDYGAKGDALSMNTMAIQKAIDAAEQAG--GGIVVFHP-GIYLTGS 92
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ +N L + KG ++GSQ++
Sbjct: 93 LFVGNNVNLHISKGVTLIGSQDI 115
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 77 IKDFGVGDGTTSTTEVFRKAVRY-VQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG G E A+R + A GG ++ VP G WLTG L SN L L K
Sbjct: 56 ITDFGAVAGDK---EKISGAIRQAIDAANQAGGGKVVVPAGEWLTGKVHLKSNVNLHLDK 112
Query: 136 GAVILGSQE 144
GAV+L S++
Sbjct: 113 GAVLLFSEK 121
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 76 SIKDFGVGDGTTS-TTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG G + T+E KA+ GG + +PEG WLT SN L L
Sbjct: 54 SIVDFGAVQGNKNKTSEAINKAISKAN---KAGGGVVVIPEGEWLTKKIHFKSNVNLHLN 110
Query: 135 KGAVILGSQ 143
KGAV+L S+
Sbjct: 111 KGAVLLFSE 119
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG GD T+ T A++ A +GG Q+ +P+G ++TG+ L SN L L+
Sbjct: 64 NIIDFGANGDNKTNNTVAINNAIKSCNA---QGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 135 KGAVI 139
+GA++
Sbjct: 121 EGAIL 125
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I+ FG GDG T+ A++ V GG ++ +PEG+WLTG L SN L+
Sbjct: 60 VNIEKFGAKGDGLFLNTKAINDAIKDVN---QHGGGKVIIPEGIWLTGPIELLSNVNLYT 116
Query: 134 QKGAVIL 140
++ A++L
Sbjct: 117 KQNALVL 123
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I+ FG VGDG + T ++AV +A GG + VP G+++TG+ + SN L
Sbjct: 8 VYNIEQFGAVGDGWANNTSAIKRAV---EACSQGGGGTIYVPAGVFVTGAIEMKSNMHLH 64
Query: 133 LQKGAVILGSQE 144
L+ G+ +L S +
Sbjct: 65 LEAGSELLFSND 76
>gi|436835773|ref|YP_007320989.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384067186|emb|CCH00396.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 505
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 76 SIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI+DFG D T T+ +KA+ A GG ++ VP G + TG+ L SN L L
Sbjct: 32 SIRDFGAKTDSTFLNTKAIQKAIDKCHA---NGGGEVVVPAGTFYTGTIFLKSNVYLHLM 88
Query: 135 KGAVILGS 142
GAV+ GS
Sbjct: 89 PGAVLQGS 96
>gi|168063573|ref|XP_001783745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664751|gb|EDQ51459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 72 KVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
+ V + DFG G+G T + ++ Y ++GG + V G LTG+ L SN T
Sbjct: 30 RFVCRVSDFGATGNGEVYDTSAIQSSIDYC---ANQGGGVVYVSPGENLTGTLYLKSNIT 86
Query: 131 LFLQKGAVILGS 142
L++ KGA I+GS
Sbjct: 87 LWVDKGATIVGS 98
>gi|408369676|ref|ZP_11167456.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
gi|407744730|gb|EKF56297.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
Length = 441
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYV-QAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V I D GV + +T+V KA++ V KGG + +P+G++LTGS + L+
Sbjct: 53 VYKITDHGV---VSDSTQVQTKALQAVIDLTASKGGGVVVIPKGVFLTGSLFFRQSTHLY 109
Query: 133 LQKGAVILGSQEL 145
L+KGAV+ GS ++
Sbjct: 110 LEKGAVLKGSDDI 122
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GD T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 21 IPDREV--NLLDFGARGDERTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 76 SNIELHV-KGTI 86
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 56 ATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVP 114
A LP + + + +SI FG GDG + T+ +A+ KGG + +P
Sbjct: 41 AQTAPSLPNIKQVNIKADTISIVRFGAQGDGISLNTQAINRAIAETS---QKGGGVVLIP 97
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVIL 140
G+W+TG L SN L +Q+ A++L
Sbjct: 98 AGVWVTGPIELKSNINLHIQRDAILL 123
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V++ I +G V DG T T +KA+ KGG ++ P G WL+G+ +L TL
Sbjct: 23 VIIDITRYGAVADGKTINTAAIQKAIDECH---QKGGGKVVFPAGSWLSGTIVLKDQVTL 79
Query: 132 FLQKGAVILGSQEL 145
K A +LGS ++
Sbjct: 80 QFDKDARLLGSTDI 93
>gi|374375481|ref|ZP_09633139.1| Endopygalactorunase [Niabella soli DSM 19437]
gi|373232321|gb|EHP52116.1| Endopygalactorunase [Niabella soli DSM 19437]
Length = 246
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DG T+ T +KA+ ++ + GG +L G ++TGS +L SN L L++GAV
Sbjct: 28 FGILSDGVTNNTRSIQKAIDFIH---ENGGGRLVFYVGRYVTGSILLKSNVILKLEEGAV 84
Query: 139 ILGSQEL 145
++G+ +
Sbjct: 85 LVGASSI 91
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
T VA P +P+ V +I D+G VG+G T VF +A+ +A GG + +P
Sbjct: 5 TEVAISPDLPLIPEHTV--TISDYGAVGNGVYDNTRVFHQAI---EACAKAGGGTVVIPP 59
Query: 116 GLWLTGSFILTSNFTLFLQKGAVILGSQ 143
G+W TG L S L GA+++ S+
Sbjct: 60 GIWRTGPIKLQSRIELHASAGALVVFSK 87
>gi|325103545|ref|YP_004273199.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972393|gb|ADY51377.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 537
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 74 VMSIKDFGVGD--GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V ++KD+ V D G T+ +KA+ YV A KG L VP G +LTG+ I+ + TL
Sbjct: 140 VTNLKDY-VDDHTGQVLQTKQIQKAIDYVSA--HKG--ILYVPNGKYLTGTLIMKRDVTL 194
Query: 132 FLQKGAVILGSQEL 145
+L+ GA+I GS L
Sbjct: 195 YLESGAIIQGSGNL 208
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 69 PKRKVVMSIKDFGVGD------GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
P ++ V +DF + D G T TE KA+ A GG ++ +PEG WLTG
Sbjct: 3 PIKECVFPEQDFSIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGP 59
Query: 123 FILTSNFTLFLQKGAVI 139
SN L L++ A++
Sbjct: 60 VHFKSNVNLHLEENAIL 76
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 22 VTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFG 81
+T K+L LQ ++R VG A+G L +T + PKR +++DFG
Sbjct: 91 MTYFKVLGLQPEHGYDFTVRAVG---ADGTLSYQSTKLHLTT--TATPKR---YNVRDFG 142
Query: 82 V-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
GDG+T T +K + + + Q+ +P G +L+G+ L S+ + F+ GA +
Sbjct: 143 ASGDGSTKDTAAIQKTIDACK----EKNCQVYLPAGTYLSGALNLHSDMSFFVDAGAQLK 198
Query: 141 GSQEL 145
S+EL
Sbjct: 199 PSREL 203
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK +I +G DG T T+ +A+ A G GGT L VP GLWLTG +L +N
Sbjct: 267 RKDTFNICRYGAKADGLTVNTKAISQAIEACHAAG--GGTVL-VPAGLWLTGPIVLKNNV 323
Query: 130 TLFLQKGAVI 139
L + K A++
Sbjct: 324 NLHIAKNALL 333
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V +++KDFG G G T + A+ G ++ +PEG +LT L SN TL
Sbjct: 82 VTLNVKDFGATGTGEKHDTASLQAAIMSCPPSG-----RVLIPEGTYLTAPLYLKSNITL 136
Query: 132 FLQKGAVILGS 142
+QKGA +LGS
Sbjct: 137 EIQKGAKLLGS 147
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+P R+V ++ DFG GD T +E F++A+ + +GG +L VPEG++LTG L
Sbjct: 21 IPDREV--NLLDFGARGDRRTDCSESFKRAI---EELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 127 SNFTLFLQKGAV 138
SN L + KG +
Sbjct: 76 SNIELHV-KGTI 86
>gi|393789566|ref|ZP_10377687.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
gi|392651014|gb|EIY44680.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
Length = 487
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T V +KAV A KGG + +P G +L L SN L L GA++LGS
Sbjct: 34 GDGVTDNTVVIQKAVDECSA---KGGGTVLIPSGTYLIRPIELKSNVNLHLDFGALVLGS 90
Query: 143 QEL 145
L
Sbjct: 91 TRL 93
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DF DG T T+ ++A+ + + GG +L +P + +GS L SNF L L
Sbjct: 3 LSLADFHPAADGETPDTQALQRAIDQI---AEAGGGRLTLPPVRYRSGSLNLPSNFELHL 59
Query: 134 QKGAVILGSQEL 145
GAV++ S+ L
Sbjct: 60 AAGAVLIASRHL 71
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 46 SGAEGALFNPATCVAGLPGDQYL----PKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQ 101
S AEG P A P D P+R +++ G G T+ KA+
Sbjct: 21 SWAEGVKLQPVEVEAPFPMDSVFLCIFPQRDFLITKYGAKAG-GKKLNTKAIAKAITACH 79
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G G ++ +P+G WLTG L SN L++++GAV+
Sbjct: 80 LVG---GGRVVIPKGEWLTGPIHLKSNINLYMEEGAVL 114
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 46 SGAEGALFNPATCVAGLPGDQYL----PKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQ 101
S AEG P A P D P+R +++ G G T+ KA+
Sbjct: 21 SWAEGVKLQPVEVEAPFPMDSVFLCIFPQRDFLITKYGAKAG-GKKLNTKAIAKAITACH 79
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G G ++ +P+G WLTG L SN L++++GAV+
Sbjct: 80 LVG---GGRVVIPKGEWLTGPIHLKSNINLYMEEGAVL 114
>gi|116625911|ref|YP_828067.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229073|gb|ABJ87782.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 553
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I D+G GDGTT TE + A+ A D+GGT L VP G+++ G+ + SN TL
Sbjct: 43 VHNILDYGAKGDGTTLDTEALQAAIDACTA--DRGGTVL-VPAGVFVIGTVEMKSNVTLR 99
Query: 133 LQKGAVILGSQELK 146
+ +LGS + K
Sbjct: 100 IAAQGKLLGSADGK 113
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P PK V ++++D G GDG+T T + A+ G G ++ VP G +LTG
Sbjct: 29 PAPTQKPKSDVQVNVRDLGATGDGSTKDTVAMQLALDRCSVLG---GGEVLVPAGEYLTG 85
Query: 122 SFILTSNFTLFLQKGAVILGSQEL 145
+ + SN L +++GA + GS ++
Sbjct: 86 ALRIHSNTVLRIEEGASLNGSPDI 109
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 71 RKVVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R+ +I FG DG + T+ KA+ KGG + VP G+WLTG +L SN
Sbjct: 42 RRDTTNIIAFGAKPDGVSLNTQAINKAI---STCSQKGGGVVLVPAGIWLTGPIVLKSNV 98
Query: 130 TLFLQKGAVIL 140
L L+K A +L
Sbjct: 99 NLHLKKAATLL 109
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK +I +G DG T T +A+ G GGT L +P G+W+TG L SN
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAIDLAHEAG--GGTVL-IPAGVWVTGPLKLKSNV 320
Query: 130 TLFLQKGAVI 139
L LQKGA++
Sbjct: 321 NLHLQKGALL 330
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++DFG GDG T + A+ G ++ PEG++LT L SN TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFPEGIYLTYPLFLKSNITLEL 138
Query: 134 QKGAVILGSQE 144
KGAV+LG++E
Sbjct: 139 GKGAVLLGAKE 149
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG G+ ++E F +A+ A GG ++ VP G WLTG L SN L +QK
Sbjct: 50 ITDFGADGEAVADSSEAFARAIAACHA---AGGGRVVVPPGWWLTGPIHLKSNVNLHVQK 106
Query: 136 GAVIL 140
GA IL
Sbjct: 107 GATIL 111
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P V++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 52 GSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVFQP-GYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGS 142
+ S L L KG +L S
Sbjct: 109 LFIKSGVNLQLDKGVTLLAS 128
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P V++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 36 GSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVFQP-GYYQTGA 92
Query: 123 FILTSNFTLFLQKGAVILGS 142
+ S L L KG +L S
Sbjct: 93 LFIKSGVNLQLDKGVTLLAS 112
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P+R +I +G VGDG TE FR A+ A GG + VPEG +LTG+ L
Sbjct: 13 FPRR--TFTITHYGAVGDGQKMNTEAFRAAI---AACHRAGGGHVLVPEGRFLTGAIHLR 67
Query: 127 SNFTLFLQKGAVILGSQELK 146
S L + +GA I S + +
Sbjct: 68 SGVDLHVTEGATIAFSPDPR 87
>gi|255531482|ref|YP_003091854.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344466|gb|ACU03792.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 492
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 79 DFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
DFG+ DG T + + A+ Y+ GG +L G +++G+ L SN TL L+ GA
Sbjct: 25 DFGIQSDGKTLNSRSIQAAIDYIST---HGGGRLVFSAGSYVSGTIYLKSNVTLHLESGA 81
Query: 138 VILGS 142
ILGS
Sbjct: 82 SILGS 86
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P V++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 52 GSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVLQP-GYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S +
Sbjct: 109 LFIKSGVNLQLDKGVTLLASPSI 131
>gi|354603312|ref|ZP_09021311.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
gi|353349189|gb|EHB93455.1| hypothetical protein HMPREF9450_00226 [Alistipes indistinctus YIT
12060]
Length = 252
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FGV DGTT+ T +KAV ++ + GG +L G +LTG+ L SN T+ +++GA
Sbjct: 31 FGVKSDGTTNNTRSIQKAVDFIS---ENGGGELAFYVGRYLTGTIHLKSNVTIVIKEGAA 87
Query: 139 ILGS 142
++ S
Sbjct: 88 LMAS 91
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 69 PKRKVVMSIKDFGVGD------GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
P ++ + +DF + + G T T+ KA++ A GG ++ +P G WLTG
Sbjct: 44 PIKEFIFPNRDFSIANYGAVKGGKTINTKAIAKAIK---ACNKAGGGRVVIPAGEWLTGP 100
Query: 123 FILTSNFTLFLQKGAVI 139
L SN L+L GA++
Sbjct: 101 VHLMSNVNLYLSDGAIL 117
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P V++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 52 GSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG--GGTVVLQP-GYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGS 142
+ S L L KG +L S
Sbjct: 109 LFIKSGVNLQLDKGVTLLAS 128
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFKSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---AACNKAGGGRVVIPEGEWLTGPVHFQSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|325106412|ref|YP_004276066.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975260|gb|ADY54244.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 440
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFGV D T TE+ + + +AF GG + VP+G++L+GS L+L++
Sbjct: 51 LTDFGVLNDSTIVQTEIIQSVID--KAFNAGGGVVI-VPKGVFLSGSLFFKPKTHLYLEE 107
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 108 GAVLKGSDDI 117
>gi|312127381|ref|YP_003992255.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311777400|gb|ADQ06886.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 454
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 77 IKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG DG + +TE +KA+ + GG + +P G++L+ L SN TL+L++
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 136 GAVILGSQELK 146
GAVI + ++
Sbjct: 73 GAVIKATNNIE 83
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V I FG V DG T T+ + A+ A KGG + VP GLWLTG L SN L
Sbjct: 37 VYPITKFGAVPDGYTLNTKSIQAAIDACTA---KGGGVVAVPPGLWLTGPLTLKSNVNLN 93
Query: 133 LQKGAVILGSQE 144
L GA +L +++
Sbjct: 94 LAAGATLLFTKD 105
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++KDFG VGDG T + A+ A D G ++ PEG++LT L SN T+ L
Sbjct: 84 INVKDFGAVGDGKRLDTFSIQAAI---MACPDGG--RVYFPEGVYLTYPIFLKSNITIEL 138
Query: 134 QKGAVILGSQ 143
KGAV+LG++
Sbjct: 139 GKGAVLLGAK 148
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++K+FG DG + F +AV + + GG L VP G+W TG L + TL L
Sbjct: 4 LNLKNFGAKADGIYNNAAAFAEAVSVLH---EAGGGTLTVPAGIWKTGPIRLCAKMTLHL 60
Query: 134 QKGAVI 139
+GAV+
Sbjct: 61 AEGAVL 66
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++S++DF + DG + T+ F A++ + +GG + VP G +LTG L SN
Sbjct: 5 LISLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVVPPGTYLTGPIRLISNLVFE 61
Query: 133 LQKGAVILGSQELK 146
+Q GA +L + +++
Sbjct: 62 IQAGATLLFTDDVE 75
>gi|329962021|ref|ZP_08300032.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530669|gb|EGF57527.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 477
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
DG T TT +KA+ GG +++P G +LTG+ +L N TL L++G+ I+GS
Sbjct: 39 ADGKTITTRGLQKAI---DDCSKNGGGIVSLPAGEYLTGTIVLKKNVTLKLEEGSKIIGS 95
Query: 143 QEL 145
+ +
Sbjct: 96 RNI 98
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI D+G V G T TE KA+ A GG ++ +PEG WLTG SN L L+
Sbjct: 53 SIVDYGAVKGGETVNTEAIAKAI---VACNKAGGGRVVIPEGEWLTGPIHFQSNVNLHLE 109
Query: 135 KGAVI 139
+ A++
Sbjct: 110 ENAIL 114
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 69 PKRKVVMSIKDFGVGD------GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
P ++ + KDF + D G T T+ A+ +A GG ++ VP+G+WLTG
Sbjct: 331 PIKEFIYPDKDFVITDYGAKSGGETDNTKAIAAAI---EACYKAGGGRVVVPDGIWLTGP 387
Query: 123 FILTSNFTLFLQKGAVI 139
SN L+L++ AV+
Sbjct: 388 IHFKSNVNLYLEENAVL 404
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DF V D T+ +T+ ++A+ A G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 134 QKGAVILGSQELK 146
K AV+LGSQ L+
Sbjct: 59 AKDAVLLGSQRLE 71
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 64 GDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + P+ K + ++ +G GDG T T +KA+ KGG + G +LTGS
Sbjct: 36 GAKKAPEGKGMFNVAKYGAKGDGKTLNTNTIQKAI---DDCAKKGGGIVVFNPGEYLTGS 92
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
+ L + KG ILGSQ++K
Sbjct: 93 VFVKKGVNLRIDKGVTILGSQDIK 116
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G + + +T+ A++ A +GG ++ +P+G WLTG L SN L L++
Sbjct: 54 ITDYGALPNDQKATSRAIMDAIKEAHA---QGGGRVVIPKGEWLTGKIHLKSNINLHLEQ 110
Query: 136 GAVILGS 142
GAV+L S
Sbjct: 111 GAVLLFS 117
>gi|302871635|ref|YP_003840271.1| glycoside hydrolase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574494|gb|ADL42285.1| glycoside hydrolase family 28 [Caldicellulosiruptor obsidiansis
OB47]
Length = 454
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 77 IKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG DG + +TE +KA+ F + GG + +P G++L+ L SN TL+L++
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKAIDI--CFENGGGVVV-IPAGIYLSRPIRLKSNVTLYLEE 72
Query: 136 GAVILGSQELK 146
GAVI + ++
Sbjct: 73 GAVIKATNNIE 83
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DG T T + A+ KGGT + VP G + T S + SN TL+L+KGAV+LG
Sbjct: 90 VADGETDNTVRLQAALSTCP----KGGT-VYVPAGRYRTASLFMKSNTTLYLEKGAVLLG 144
Query: 142 SQE 144
+
Sbjct: 145 DND 147
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DG T T + A+ KGGT + VP G + T S + SN TL+L+KGAV+LG
Sbjct: 90 VADGETDNTVRLQAALSTCP----KGGT-VYVPAGRYRTASLFMKSNTTLYLEKGAVLLG 144
Query: 142 SQE 144
+
Sbjct: 145 DND 147
>gi|160881342|ref|YP_001560310.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160430008|gb|ABX43571.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 491
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I D+G V DG T+ +KA+ G Q+ VP G +L+G+ IL SN
Sbjct: 49 VYNILDYGAVADGVTNNAATIQKAIDEATIHGG----QVVVPAGNYLSGTIILKSNIDFH 104
Query: 133 LQKGAVILGS 142
L+ GAV++ S
Sbjct: 105 LEMGAVLISS 114
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 53 FNPATCVAGLP--------GDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAF 103
FN A +P G + P ++ V ++ D+G GD T +KA+ A
Sbjct: 20 FNVTAQTANIPDFPWMKEVGAKTFPVQQTVYNVTDYGAKGDALEMNTTAIQKAI---DAA 76
Query: 104 GDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
GG + G++LTG+ + +N + KG ++GSQ++
Sbjct: 77 EQAGGGIVTFSPGIYLTGALFVGNNVNFNIPKGTTLIGSQDI 118
>gi|251787804|ref|YP_003002525.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247536425|gb|ACT05046.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 604
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I +G GDGTT T +KA+ Q G ++++P G++ G+ L S+ TL L
Sbjct: 152 INITQYGAKGDGTTLNTAAIQKAIDACQI-----GCRVDIPPGVFKIGALWLKSDMTLNL 206
Query: 134 QKGAVILGSQE 144
+GA +LGS +
Sbjct: 207 LQGATLLGSDK 217
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+++KDFG GDG T + ++ G ++ VP+G +L L SN T+
Sbjct: 55 VLNVKDFGAKGDGLELDTAAVQASIAACPLHG-----RIIVPKGRYLLTPIFLKSNITIE 109
Query: 133 LQKGAVILGSQE 144
L++GAV+LG+Q+
Sbjct: 110 LEEGAVLLGAQD 121
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 61 GLPGDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
LP +P R+V I+D G G R +QA +GG ++ VP G+WLT
Sbjct: 8 ALPVPPVIPDRRV--DIRDHGAHPGGALLNT--RAIADAIQACARQGGGRVVVPSGIWLT 63
Query: 121 GSFILTSNFTLFLQKGAVILGSQ 143
G+ S L L+ GA + SQ
Sbjct: 64 GAIHFRSRIDLHLEAGAELRFSQ 86
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 70 KRKVVMSIKD---FGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
K+KV++ I VGDG T T V ++A+ D+ L P+G++LTG+ L
Sbjct: 84 KKKVLLDITRGPYHAVGDGKTLNTAVIQRAIDDCM---DEEAVYL--PKGVFLTGALRLH 138
Query: 127 SNFTLFLQKGAVILGSQELK 146
S+ L+L++GAV+ G+ +++
Sbjct: 139 SDMELYLEEGAVLQGTDQVE 158
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 75 MSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI DFG G +T FR A+ V A GG ++ +P G +LTG+ L SN L +
Sbjct: 73 VSITDFGADPTGEHLSTAAFRDAIEEVSA---AGGGRVVIPAGEFLTGAIHLRSNVELHV 129
Query: 134 QKGAVILGSQ 143
GAV+ SQ
Sbjct: 130 GSGAVVRFSQ 139
>gi|4996612|dbj|BAA78557.1| polygalacturonase [Prevotella ruminicola]
Length = 494
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 76 SIKDFGVGDGTTS-TTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IK +G + TT +T ++A+ A D GG ++ VP G++ G+ L S+ L+L+
Sbjct: 49 NIKSYGAKNDTTVLSTHALQQAI---DACSDAGGGRVVVPAGIYKIGTIQLKSHVHLYLE 105
Query: 135 KGAVILGSQELK 146
+GA + GS L+
Sbjct: 106 QGATLYGSTRLE 117
>gi|427409554|ref|ZP_18899756.1| hypothetical protein HMPREF9718_02230 [Sphingobium yanoikuyae ATCC
51230]
gi|425711687|gb|EKU74702.1| hypothetical protein HMPREF9718_02230 [Sphingobium yanoikuyae ATCC
51230]
Length = 526
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 41 RRVGFSGAEGALFNPATCVAGLPG-DQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVR 98
RR GA G + +A LP + LP+ V +++DFG GDG+ + +A+
Sbjct: 7 RRFLLKGAAGI-----SMLAALPAFGRALPQGMV--NVRDFGAKGDGSHIDSPAIDRAIA 59
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+ ++GG + VP G + + L SN TL+L +GA +L +
Sbjct: 60 FA---AERGGGTVYVPPGSYACYTIHLKSNITLWLDRGATLLAA 100
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 61 GLPGDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
LP +P R+V I+D G G R +QA +GG + VP G+WLT
Sbjct: 8 ALPVPPVIPDRRV--DIRDHGARPGGALLNT--RAIAEAIQACARQGGGHVVVPPGIWLT 63
Query: 121 GSFILTSNFTLFLQKGAVILGSQ 143
G+ S L L+ GA + SQ
Sbjct: 64 GAIHFRSRIDLHLEAGAELRFSQ 86
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P V++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 52 GSRQMPGNHVILSANSFGAVADSTVLSTEAIQKAIDSCAVSG--GGTVVLQP-GYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S +
Sbjct: 109 LFIKSGVNLQLDKGVTLLASPSI 131
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G S T F A+ + A +GG L VP G WLTG L S+ L L+ GA ++ S+E
Sbjct: 30 GIQSCTTAFANAIDTLAA---QGGGTLTVPAGRWLTGPICLRSHIRLHLETGAHVVFSRE 86
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 68 LPKRKVVMSIKDFGVGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
P R+ + FG G T +T F++A+ KGG ++ VP+G++LTG+ L
Sbjct: 19 FPDRR--FDVTRFGADSGGKTDSTAAFQQAIDEAHQ---KGGGRVTVPKGVFLTGALRLK 73
Query: 127 SNFTLFLQKGAVILGSQ 143
SN L + K AVI SQ
Sbjct: 74 SNVELHVTKDAVIRFSQ 90
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ +FG GDG T T FR+A+ + GG ++ VP G +LTG+ L SN L + +
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAIDRCT---NAGGGRVVVPPGSYLTGAIHLKSNVDLHISE 113
Query: 136 GAVILGSQELK 146
G + SQ K
Sbjct: 114 GTTVKFSQNPK 124
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 22/129 (17%)
Query: 28 LSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGD---------QYLPKR------- 71
++ Q ++ +L L +G S A LFN A C L Q + R
Sbjct: 1 MNRQFERRDILKL--IGCSAASVGLFNLAGCQQTLSDSKSFAWSSEAQQIKARIKAPEFP 58
Query: 72 KVVMSIKDFGVGDGTTSTTEV-FRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
++ SIKDFG G + + + R A+ V + G GGT L VP G + TG L SN
Sbjct: 59 ELTKSIKDFGAKPGKQNDSSMAIRAAIADVASAG--GGTVL-VPAGEFYTGPVHLESNIN 115
Query: 131 LFLQKGAVI 139
L + +GAV+
Sbjct: 116 LHIAQGAVL 124
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 72 KVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
K V+ DFG DG T +T+ ++A+ A KGG ++ G +LTGS + S
Sbjct: 50 KAVVYANDFGAREDGKTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSVFIKSGVF 106
Query: 131 LFLQKGAVILGSQELK 146
L + +G +LGSQ L+
Sbjct: 107 LHVDEGVELLGSQSLE 122
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP K+++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 47 GSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAIDSCAVSG--GGTVILQP-GYYQTGA 103
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L + KG +L S ++
Sbjct: 104 LFVKSGVNLQIGKGVTLLASPDI 126
>gi|198274117|ref|ZP_03206649.1| hypothetical protein BACPLE_00254 [Bacteroides plebeius DSM 17135]
gi|198273195|gb|EDY97464.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 479
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KDFG VGDG +E +A+ VQA + GGT + VP G + S L S L+
Sbjct: 23 IYNVKDFGAVGDGQHIDSEAINQAI--VQAAREGGGT-IYVPAGKYACYSIRLASQIHLY 79
Query: 133 LQKGAVILGS 142
L++GA I+ +
Sbjct: 80 LEQGATIVAA 89
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG G+ T+ T A++ A +GG Q+ +P+G ++TG+ L SN L L+
Sbjct: 64 NIIDFGANGNNKTNNTVAINNAIKSCNA---QGGGQVIIPQGQFITGAIHLLSNVNLHLE 120
Query: 135 KGAVI 139
+GA++
Sbjct: 121 EGAIL 125
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ G GGT L VP G +L+ + +L N TL L+
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACHKAG--GGTVL-VPAGTYLSATIVLKDNVTLHLE 82
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 83 KDALILGTTDYK 94
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ G GGT L VP G +L+ + +L N TL L+
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACHKAG--GGTVL-VPAGTYLSATIVLKDNVTLHLE 82
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 83 KDALILGTTDYK 94
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ G GGT L VP G +L+ + +L N TL L+
Sbjct: 26 NVKKYGARGNGKKMDSPAIQKAIDACHKAG--GGTVL-VPAGTYLSATIVLKDNVTLHLE 82
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 83 KDALILGTTDYK 94
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I D+G DG+ TE FR A++ +A G GGT + VP G +++G L SN L
Sbjct: 23 VFNIADYGARKDGSALATEAFRSAIQAAKAAG--GGT-VYVPAGQYISGPIELVSNLVLH 79
Query: 133 LQKGAVI 139
+ GA +
Sbjct: 80 IDAGATL 86
>gi|154490366|ref|ZP_02030627.1| hypothetical protein PARMER_00599 [Parabacteroides merdae ATCC
43184]
gi|423725588|ref|ZP_17699704.1| hypothetical protein HMPREF1078_03593 [Parabacteroides merdae
CL09T00C40]
gi|154088977|gb|EDN88021.1| hypothetical protein PARMER_00599 [Parabacteroides merdae ATCC
43184]
gi|409234035|gb|EKN26866.1| hypothetical protein HMPREF1078_03593 [Parabacteroides merdae
CL09T00C40]
Length = 250
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 59 VAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL 117
VAGL Y +V M FG+ DG T T ++AV Y+ ++GG +L G
Sbjct: 17 VAGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYIS---EQGGGRLIFYVGR 65
Query: 118 WLTGSFILTSNFTLFLQKGAVIL 140
+LTGS L SN T+ +++GAV++
Sbjct: 66 YLTGSIELKSNVTIRIEEGAVLV 88
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 46 SGAEGALFNPATCVAGLPGDQY----LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQ 101
S AEG + A P D P R V++ D +T R + ++
Sbjct: 19 SMAEGRSYERVPVEAPFPMDSVTLCSFPDRDFVITKYGASHADKKKNT----RALAKAIE 74
Query: 102 AFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
A GG ++ VP G W TG L SN L+L++GAV+
Sbjct: 75 ACNRAGGGRVVVPAGEWFTGPVHLKSNVNLYLEEGAVL 112
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP K+++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 47 GSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAIDSCAVSG--GGTVVLQP-GYYQTGA 103
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L + KG +L S ++
Sbjct: 104 LFVKSGVNLQIGKGVTLLASPDI 126
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 75 MSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DF V D T+ +T+ ++A+ +G T L +P G +LTG+ L S TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAIDSAA----EGDTVL-IPAGRFLTGALFLKSKMTLEL 58
Query: 134 QKGAVILGSQELK 146
K AV+LGSQ+L+
Sbjct: 59 AKDAVLLGSQQLE 71
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ G GGT L VP G +L+ + +L N TL L+
Sbjct: 24 NVKKYGARGNGKKLDSPAIQKAIDACHKAG--GGTVL-VPAGTYLSATIVLKDNVTLHLE 80
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 81 KDALILGTTDYK 92
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DF V D T+ +T+ ++A+ A G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 134 QKGAVILGSQELK 146
K A++LGSQ L+
Sbjct: 59 AKDAMLLGSQRLE 71
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DF V D T+ +T+ ++A+ A G + +P G +LTG+ L S TL L
Sbjct: 4 INIIDFAAVPDATSLSTQAIQRAIDSASA-----GDTVLIPAGRFLTGALFLKSEMTLEL 58
Query: 134 QKGAVILGSQELK 146
K A++LGSQ L+
Sbjct: 59 AKDAMLLGSQRLE 71
>gi|423346855|ref|ZP_17324543.1| hypothetical protein HMPREF1060_02215 [Parabacteroides merdae
CL03T12C32]
gi|409219136|gb|EKN12100.1| hypothetical protein HMPREF1060_02215 [Parabacteroides merdae
CL03T12C32]
Length = 250
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 59 VAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL 117
VAGL Y +V M FG+ DG T T ++AV Y+ ++GG +L G
Sbjct: 17 VAGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYIS---EQGGGRLIFYVGR 65
Query: 118 WLTGSFILTSNFTLFLQKGAVIL 140
+LTGS L SN T+ +++GAV++
Sbjct: 66 YLTGSIELKSNVTIRIEEGAVLV 88
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 75 MSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++I DF V D T+ +T+ ++A+ +G T L +P G +LTG+ L S TL L
Sbjct: 4 INIIDFDAVPDATSLSTQAIQRAIDSAA----EGDTVL-IPAGRFLTGALFLKSKMTLEL 58
Query: 134 QKGAVILGSQELK 146
K AV+LGSQ+L+
Sbjct: 59 AKDAVLLGSQQLE 71
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 70 KRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
K+ IK V DG T T+ A+ A GG + +P+GLW+TG +L SN
Sbjct: 40 KKDTFNIIKYGAVADGITLNTKSINNAI---DACSKNGGGVVLIPQGLWMTGPIVLKSNV 96
Query: 130 TLFLQKGAVI 139
L + + A++
Sbjct: 97 NLHIDRAAMV 106
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 63 PGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P +P+R + DFG VGDGTT TE F +A+ V GG +L VP G + TG
Sbjct: 79 PALPVIPER--TFRLTDFGAVGDGTTLNTEAFARAIAAVAK---AGGGKLVVPAGTFRTG 133
Query: 122 SFILTSNFTLFLQKGAVI 139
F L S+ L L+ GA+I
Sbjct: 134 PFALCSSLELHLEAGALI 151
>gi|398899483|ref|ZP_10649037.1| endopolygalacturonase [Pseudomonas sp. GM50]
gi|398182587|gb|EJM70098.1| endopolygalacturonase [Pseudomonas sp. GM50]
Length = 605
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 38 LSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKA 96
++R VG G E A +PA Q K V +K +G GDG++ T + A
Sbjct: 127 FTVRAVGADGKESA-DSPALV-------QRTTKVAPVFDVKKYGAKGDGSSLDTLAIQNA 178
Query: 97 VRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
+ G ++ +P+G++ +G+ L SN TL + +GA +LGS+
Sbjct: 179 IEACTV-----GCKVLLPKGIYKSGALYLKSNMTLEIAEGATLLGSE 220
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ +A GG ++ VP G WLTG SN L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 136 GAVI 139
AV+
Sbjct: 112 NAVL 115
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ +A GG ++ VP G WLTG SN L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 136 GAVI 139
AV+
Sbjct: 112 NAVL 115
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ +A GG ++ VP G WLTG SN L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 136 GAVI 139
AV+
Sbjct: 112 NAVL 115
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ +A GG ++ VP G WLTG SN L+L++
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAI---EACNQSGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 136 GAVI 139
AV+
Sbjct: 112 NAVL 115
>gi|325300086|ref|YP_004260003.1| glycoside hydrolase [Bacteroides salanitronis DSM 18170]
gi|324319639|gb|ADY37530.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
Length = 476
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++KDFG VGDG +E +A++ A +GG +++P G + S L S+ L L+
Sbjct: 25 NVKDFGAVGDGIHIDSEAINQAIQTAAA---QGGGTVHIPAGEYACYSIRLASHIHLHLE 81
Query: 135 KGAVILGS 142
+GA I+G+
Sbjct: 82 QGATIVGA 89
>gi|325681266|ref|ZP_08160796.1| dockerin type I repeat protein [Ruminococcus albus 8]
gi|324107188|gb|EGC01474.1| dockerin type I repeat protein [Ruminococcus albus 8]
Length = 868
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 28 LSLQITKKPVLSLRRVGFSGAEGAL----------FNPATCVAGLPGDQYLPKRKVVMS- 76
+S +I + + +L + G AL ++ T + G + + +KV+
Sbjct: 1 MSTKILSRTLAALTAIALVGGGCALPDAMKVSAYSYDSITGAVNVTGFKAVKYQKVITVN 60
Query: 77 -IKDFGVGD-GTTSTTEVFRKAVRYVQ-AFGDKGGTQLNVPEGLW-LTGSFILTSNFTLF 132
+ DFG + G+ S T + A+RY + DK ++ +P+G + +T S I+ SN L+
Sbjct: 61 VVTDFGADNTGSVSATAAIQNALRYARDNASDKIQVKIVIPKGTYSMTKSLIIGSNTHLY 120
Query: 133 LQKGAVI 139
++KGAVI
Sbjct: 121 MEKGAVI 127
>gi|381203143|ref|ZP_09910251.1| polygalacturonase [Sphingobium yanoikuyae XLDN2-5]
Length = 531
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 41 RRVGFSGAEGALFNPATCVAGLPG-DQYLPKRKV---VMSIKDFGV-GDGTTSTTEVFRK 95
RR GA G + +A LP + LP+ V +++++DFG GDG+ + +
Sbjct: 7 RRFLLKGAAGI-----SMLAALPAFGRALPQGIVPQGMVNVRDFGAKGDGSHIDSPAIDR 61
Query: 96 AVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
A+ + ++GG + +P G + + + L SN TL+L +GA +L +
Sbjct: 62 AIAFA---AERGGGTVYLPPGRYASYTIHLKSNITLWLDRGATLLAA 105
>gi|146295704|ref|YP_001179475.1| glycoside hydrolase family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409280|gb|ABP66284.1| glycoside hydrolase, family 28 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 454
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 77 IKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ DFG DG + TE +KA+ + GG + +P G++L+ L SN TL+L++
Sbjct: 16 VTDFGAKPDGLSFCTEAIQKAI---DTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 136 GAVILGSQELK 146
GAVI + ++
Sbjct: 73 GAVIKATNNIE 83
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 75 MSIKDFGVGDGT-TSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ I D+G G T+T++ A+ G G + +P G WLTG L SN L L
Sbjct: 53 LPITDYGALQGNQTATSKAITTAIEKAHKLG---GGIVVIPAGEWLTGKIHLKSNVNLHL 109
Query: 134 QKGAVILGSQ 143
KGA++L S+
Sbjct: 110 DKGALLLFSE 119
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 49 EGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGVGD------GTTSTTEVFRKAVRYVQA 102
+G F A P + P ++ + +DF + D G TE KA+ A
Sbjct: 26 QGVTFKSVQVQAPFPME---PIKECIFPERDFSIVDYGAVEGGKQKNTEAIAKAI---DA 79
Query: 103 FGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
GG ++ +P G WLTGS SN L L + A++
Sbjct: 80 CNKAGGGRVVIPAGEWLTGSIHFKSNVNLHLAENAIV 116
>gi|349858577|gb|AEQ20322.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 553
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +K FG GDG + T KA+ A GG +++ P G +L S L SN TL+
Sbjct: 61 VFDVKTFGATGDGKSLDTSSINKAI---DAAASAGGGRVSFPAGSYLCHSIHLQSNITLY 117
Query: 133 LQKGAVILGSQEL 145
L +GA ++ + L
Sbjct: 118 LGEGATLVAADPL 130
>gi|196231702|ref|ZP_03130559.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196224174|gb|EDY18687.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 510
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVIL 140
VGDG T T ++A+ A GGT + + G +L+G+ IL S TL + KGA +L
Sbjct: 32 AVGDGKTKDTAALQRAI---DAAAKVGGT-VRLATGTYLSGTVILKSGVTLQIDKGATLL 87
Query: 141 GSQE 144
GS +
Sbjct: 88 GSPQ 91
>gi|21628922|gb|AAM28240.1| polygalacturonase [Meloidogyne incognita]
Length = 633
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ I FG GDGTT T+ +KA+ + G ++ +P+G++L+G L S T
Sbjct: 171 IADITTFGATGDGTTLNTQAIQKAIDSCSSSTSAFGCKVLIPKGIFLSGPLFLRSQMTFE 230
Query: 133 LQKGAVI 139
L GA++
Sbjct: 231 LANGAIL 237
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DGTT T + A+ KGGT + VP G + T S + S TL+L+KGAV+LG
Sbjct: 90 VADGTTDNTGKLQAALSTCP----KGGT-VYVPAGRYRTSSLFMKSCTTLYLEKGAVLLG 144
Query: 142 SQE 144
+
Sbjct: 145 DND 147
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++S++DF + DG + T+ F A++ + +GG + P G +LTG L SN
Sbjct: 5 LISLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVAPPGTYLTGPIRLISNLVFE 61
Query: 133 LQKGAVILGSQELK 146
+Q GA +L + +++
Sbjct: 62 IQAGATLLFTDDVE 75
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 64 GDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSF 123
G Q +PK + + DFG+ T+ + F ++ + A +KGG + +P G++ G+
Sbjct: 45 GAQRVPKSDCIHA-TDFGLKSDTSVLSTRFVQSA--IDACHEKGGGTVIIPSGVYRIGAL 101
Query: 124 ILTSNFTLFLQKGAVILGSQELK 146
+ S L L KG ++ S++++
Sbjct: 102 FIKSGVNLHLSKGTTLIASEDIR 124
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V ++K +G +GDG T+ ++ + A + GG + VP G + G+ +L SN TL
Sbjct: 50 VYNVKRYGAIGDGKAMDTKAVQETI---DACHEAGGGVVRVPAGDFQIGTIVLKSNVTLS 106
Query: 133 LQKGAVILGS 142
L GA +LGS
Sbjct: 107 LDHGASLLGS 116
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP K+++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 47 GSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAIDSCAISG--GGTVVLQP-GYYQTGA 103
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L + KG +L S ++
Sbjct: 104 LFVKSGVNLQIGKGVTLLASPDI 126
>gi|393787227|ref|ZP_10375359.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
gi|392658462|gb|EIY52092.1| hypothetical protein HMPREF1068_01639 [Bacteroides nordii
CL02T12C05]
Length = 513
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 75 MSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
MSI DFG + + + A+ G GGT + VP G +LT + L SN LFL
Sbjct: 22 MSILDFGAKQNSRDNSAAIQAAIDKCALSG--GGT-VYVPAGTYLTTTIFLKSNVHLFLH 78
Query: 135 KGAVILGSQELK 146
GAV+ G + K
Sbjct: 79 NGAVLQGVTDPK 90
>gi|224536548|ref|ZP_03677087.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521804|gb|EEF90909.1| hypothetical protein BACCELL_01423 [Bacteroides cellulosilyticus
DSM 14838]
Length = 525
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++ D+GV + S T +K + GG + +P G +++G+ L +N LF
Sbjct: 25 IYNVTDYGVKANSGRSETASLQKIIDLCST---NGGGTVCIPTGTYISGTLFLKNNVMLF 81
Query: 133 LQKGAVILGSQEL 145
L +GAV+ GS +L
Sbjct: 82 LDRGAVLRGSSDL 94
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 46 SGAEGALFNPATCVAGLPGDQ-YL---PKRKVVMSIKDFGVGDGTTS-TTEVFRKAVRYV 100
+ A+ P A P D YL P ++ I +G G T+ F KA+
Sbjct: 5 TSAQKVHVQPVHVEAPFPMDSVYLCTFPNKE--FPITKYGARKGNNHLNTQAFAKAI--- 59
Query: 101 QAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
+A GG ++ VP G W TG L S+ LFL++GAV+
Sbjct: 60 EACNRAGGGRVVVPAGEWFTGPIHLKSHVNLFLEEGAVV 98
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++ I+DFG + + A+ + A GGT L +P G W +G L SN TL +
Sbjct: 85 LLDIRDFGASTESADNARAIQSAIAAIPA----GGT-LRLPAGSWSSGPVFLKSNMTLLI 139
Query: 134 QKGAVI 139
++GAV+
Sbjct: 140 EEGAVL 145
>gi|227537595|ref|ZP_03967644.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242544|gb|EEI92559.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 172
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 72 KVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
K V+ DFG DG T +T+ ++A+ A KGG ++ G +LTGS + S
Sbjct: 50 KAVVYANDFGAREDGMTISTKAIQQAI---DACAKKGGGKVQFRPGKYLTGSIFIKSGVF 106
Query: 131 LFLQKGAVILGSQELK 146
L + +G +LGSQ L+
Sbjct: 107 LHVDEGVELLGSQSLE 122
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
+PK + +++ DF GDG T F+ A+ A GG Q+ VP+G +LTG+ L
Sbjct: 50 IPKAQFLLT--DFDARGDGIFDNTAAFKAAI---DACRKAGGGQIRVPDGHYLTGAIQLH 104
Query: 127 SNFTLFLQKGAVILGSQE 144
SN L + GA ++ S +
Sbjct: 105 SNIELNVSAGARLIFSTD 122
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ G GGT L VP G +L+ + +L N TL L+
Sbjct: 26 NVKKYGARGNGKKLDSPAIQKAIDACHKAG--GGTVL-VPAGTYLSATIVLKDNVTLHLE 82
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 83 KDALILGTTDYK 94
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 63 PGDQYL-PKRKVVMSIKDFG-----VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
P +Y+ P R S+ DFG + D T S T + A GG ++ +PEG
Sbjct: 40 PIKEYVYPDRN--FSVVDFGAVKGGIADNTKSITAA-------INACHKAGGGRVVIPEG 90
Query: 117 LWLTGSFILTSNFTLFLQKGAVI 139
WLTG L SN L+L + AV+
Sbjct: 91 EWLTGPVHLKSNVNLYLSENAVL 113
>gi|329851295|ref|ZP_08266052.1| glycoside hydrolase family protein [Asticcacaulis biprosthecum C19]
gi|328840141|gb|EGF89713.1| glycoside hydrolase family protein [Asticcacaulis biprosthecum C19]
Length = 511
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L + + +++DFG GDG T T+ R AV+ A G GGT L +P G +L+ S L
Sbjct: 19 LAQSNGIFNVRDFGARGDGVTLDTDAIRSAVKAAHAAG--GGTVL-LPAGHYLSFSVRLF 75
Query: 127 SNFTLFLQKGAVI 139
TL+L +G V+
Sbjct: 76 DKVTLWLGEGCVL 88
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 51 ALFNPATCVAGL---PGDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKG 107
ALF A +A L P P GDG + T + A+ G G
Sbjct: 7 ALFMAAAGIASLLAVPSAHAAPGMTTCNPHSYGAKGDGVSKDTAAIQHAIDACAKRG--G 64
Query: 108 GTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
GT L P G +L+ +L SN TL L+KGA +LGS +
Sbjct: 65 GTVLLTP-GTYLSAPIVLKSNITLKLEKGATLLGSPDFN 102
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
LP + S+ D+G +GDG T + + A GG Q+ P G +LT + +
Sbjct: 32 LPHLPHLFSVADYGAIGDGLHYDTAAIQATI---DACHSAGGGQIRFPPGTYLTATVYIK 88
Query: 127 SNFTLFLQKGAVILGSQELK 146
S L +++GA ILG +L+
Sbjct: 89 SGVYLVVEEGAKILGGTKLE 108
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
LP ++ +M+ + S ++ A+++ G T + VP G +LTG+ L +
Sbjct: 6 LPHKRTIMAKLNILAFGADASGQQLATAAIQHAIDIAAPGDTVV-VPPGRYLTGALFLKN 64
Query: 128 NFTLFLQKGAVILGSQELK 146
+ LQ GAV+LGS+EL+
Sbjct: 65 HLIFELQTGAVLLGSRELE 83
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 63 PGDQYL-PKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
P +Y+ P R S+ DFG V G T+ A+ A GG ++ +PEG WLT
Sbjct: 40 PIKEYVYPNRN--FSVVDFGAVKGGIADNTKSIAAAI---DACHKAGGGRVVIPEGEWLT 94
Query: 121 GSFILTSNFTLFLQKGAVI 139
G L SN L+L + AV+
Sbjct: 95 GPVHLKSNVNLYLSENAVL 113
>gi|333382502|ref|ZP_08474172.1| hypothetical protein HMPREF9455_02338 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828813|gb|EGK01505.1| hypothetical protein HMPREF9455_02338 [Dysgonomonas gadei ATCC
BAA-286]
Length = 496
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V ++KD+G GDGT + +A+ + GG + P G +L+ S L SN TL
Sbjct: 23 VFYNVKDYGAKGDGTQIDSPAINRAI---EDAAKNGGGTIFFPAGTYLSYSVRLQSNITL 79
Query: 132 FLQKGAVILGS 142
+L G+V+L +
Sbjct: 80 YLDAGSVLLAA 90
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+K ++I +G DG T T+ +A+ +GG + +PEGLWLTG L SN
Sbjct: 42 KKDTINILKYGAKNDGITLNTKSINQAITDCN---KRGGGVVVIPEGLWLTGPIELKSNV 98
Query: 130 TLFLQKGAVILGSQEL 145
L L+K A++ ++++
Sbjct: 99 NLHLKKNALLQFTKDM 114
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 69 PK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
PK R +I +G V DG T TE RKA+ A GG ++ VP G +L+G L
Sbjct: 62 PKFRDANYNIVSYGAVADGKTMATESIRKAI---LACSKDGGGKVIVPSGKFLSGPIHLE 118
Query: 127 SNFTLFLQKGAVILGS 142
+N L L +GA IL S
Sbjct: 119 NNVNLHLMEGAEILFS 134
>gi|154502613|ref|ZP_02039673.1| hypothetical protein RUMGNA_00426 [Ruminococcus gnavus ATCC 29149]
gi|336431285|ref|ZP_08611138.1| hypothetical protein HMPREF0991_00257 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796805|gb|EDN79225.1| hypothetical protein RUMGNA_00426 [Ruminococcus gnavus ATCC 29149]
gi|336019011|gb|EGN48744.1| hypothetical protein HMPREF0991_00257 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 108
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G V DGTT+ + AV A GG ++ VP G +L+G+ +L SN TL+L++
Sbjct: 5 ITDYGAVADGTTNNRAAIQAAV---DACTVAGGGRVIVPIGQFLSGTIVLKSNVTLYLER 61
Query: 136 G 136
G
Sbjct: 62 G 62
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T ++A+ A G G + +P G +LTG+ L S+ L+L++GAV+ G+
Sbjct: 126 GDGITKNTAALQRAI---DACGP--GDAVYLPAGTYLTGALQLHSDMELYLEEGAVLQGT 180
Query: 143 QEL 145
+L
Sbjct: 181 AQL 183
>gi|374374710|ref|ZP_09632368.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231550|gb|EHP51345.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 550
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++K FG GDG T T+ + A+ +KGGT P G++++G+ L SN TL+
Sbjct: 42 IYNVKAFGAKGDGKTLDTKAIQTAIDTCNR--NKGGTVF-FPPGIFVSGTLQLKSNVTLY 98
Query: 133 LQKGAVILGSQELK 146
L A +LG+ + K
Sbjct: 99 LSAQATLLGTTDGK 112
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
SI DFG ST E KA+ A GG ++ +P G+WLTG+ L N L L K
Sbjct: 50 SITDFGASPNADST-EAIAKAITACHA---AGGGRVTIPAGVWLTGAVHLLGNVDLHLAK 105
Query: 136 GAVI 139
A +
Sbjct: 106 EATL 109
>gi|168034210|ref|XP_001769606.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679148|gb|EDQ65599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 100 VQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+ ++GG +++P G +LTG+ L SN TL++++GA I+GS
Sbjct: 22 IDHCAEQGGGVVHIPPGTYLTGTIHLRSNITLWVEEGATIMGS 64
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
R+ +SI G DG T +++ A+ + GG + +P GLWLTG ++ SN
Sbjct: 265 RRDTLSIVALGAKADGVTLNSKIINAAITKAS---ENGGGVVMIPAGLWLTGPIVMKSNV 321
Query: 130 TLFLQKGAVI 139
L+L A++
Sbjct: 322 NLYLAPNALL 331
>gi|320107426|ref|YP_004183016.1| hypothetical protein AciPR4_2220 [Terriglobus saanensis SP1PR4]
gi|319925947|gb|ADV83022.1| hypothetical protein AciPR4_2220 [Terriglobus saanensis SP1PR4]
Length = 545
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 66 QYLPKRKVVMSIKDF----GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
Q LP+ + V + D +GDG T T +A+ A G GGT + P G++L+
Sbjct: 31 QSLPQDRSVAGVFDVRAYGAIGDGKTVDTPAINRAIEAASAVG--GGT-VAFPAGVYLSF 87
Query: 122 SFILTSNFTLFLQKGAVILGS 142
S L S+ L L GAVIL +
Sbjct: 88 SIRLRSHIQLQLHAGAVILAA 108
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 50 GALFNPATCVAGLPGDQYLPKRKVVMSIKDFGVGD-GTTSTTEVFRKAVRYVQAFGDKGG 108
A A V P Q+ +IKDFG + G T+ A+ A +GG
Sbjct: 30 AAQIKSAIVVPTFPAKQF--------NIKDFGAKENGQYDCTQAINSAIEACHA---QGG 78
Query: 109 TQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
Q+ +P+G + TG+ L SN L L A++
Sbjct: 79 GQVYIPDGTYFTGAIHLLSNVNLHLSDNAIV 109
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG-LWLTGSFILTSNFTLFL 133
+++D+G GDG + +KA+ A + GG ++ +P G +++GS +L SN L++
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAI---DACSEAGGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 134 QKGAVILGSQE 144
+ GAV+ S +
Sbjct: 61 ESGAVLKASTD 71
>gi|307132357|ref|YP_003884373.1| Polygalacturonase [Dickeya dadantii 3937]
gi|306529886|gb|ADM99816.1| Polygalacturonase [Dickeya dadantii 3937]
Length = 459
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI+ + DG T TE+F++A+ + A +GG L V G +L G L SNF L L
Sbjct: 18 LSIRSYTPAADGVTPDTELFQRAIDDLTA---QGGGTLVVEPGRYLLGGLRLPSNFCLQL 74
Query: 134 QKGAVILGS 142
GA ++ S
Sbjct: 75 DAGAELIAS 83
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P +++S FG V D T +TE +KA+ G GGT + + G + TG+
Sbjct: 52 GSRQMPGNNLILSANSFGAVADSTVLSTEAIQKAIDSCSVSG--GGT-VTLQPGYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S +
Sbjct: 109 LFVKSGVNLQLDKGVTLLASPHI 131
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P +++S FG V D T +TE +KA+ G GGT + + G + TG+
Sbjct: 52 GSRQMPGNSLILSANSFGAVADSTVLSTEAIQKAIDSCSVSG--GGT-VTLQPGYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S +
Sbjct: 109 LFVKSGVNLQLDKGVTLLASPHI 131
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +P +++S FG V D T +TE +KA+ G GGT + + G + TG+
Sbjct: 52 GSRQMPGNSLILSANSFGAVADSTVLSTEAIQKAIDSCSVSG--GGT-VTLQPGYYQTGA 108
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S +
Sbjct: 109 LFVKSGVNLQLDKGVTLLASPHI 131
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + +PK ++ D+G V DG T T+ +KA+ GG + G +LTGS
Sbjct: 35 GARNIPKSNRSYNVADYGAVADGVTMNTKAIQKAI---DECARNGGGTVTFSPGKYLTGS 91
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
L + K +LGS +LK
Sbjct: 92 VYLKEGVHFIIPKHTTLLGSTDLK 115
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 77 IKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
I+DFG + + R + A GG ++ +P G WLTG L SN L L++G
Sbjct: 68 IRDFGARQKNNNNHKSTDAIHRAIDAATTAGGGKVLIPRGNWLTGPIHLKSNINLHLEEG 127
Query: 137 AVILGSQE 144
A + S++
Sbjct: 128 ASLYFSED 135
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 62 LPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
L + Y K + +++K F GDG T T + A+ + D G ++ +P+G + T
Sbjct: 71 LSKEVYTKKESICLNVKHFNAKGDGITDDTLAIQAAI---MSCPDDG--RVFIPKGTYAT 125
Query: 121 GSFILTSNFTLFLQKGAVILGSQELK 146
+ L SN TL L+KGA +L S +
Sbjct: 126 KTIFLKSNLTLELEKGATLLYSASFE 151
>gi|329956837|ref|ZP_08297405.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523594|gb|EGF50686.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 439
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G G+G + +KA+ A GG + VP G +L+ + +L N TL L+
Sbjct: 8 NVKKYGAKGNGRKMDSPAIQKAI---DACHKAGGGTVIVPAGTYLSATIVLKDNVTLRLE 64
Query: 135 KGAVILGSQELK 146
K A+ILG+ + K
Sbjct: 65 KDALILGTTDYK 76
>gi|317474354|ref|ZP_07933628.1| hypothetical protein HMPREF1016_00607 [Bacteroides eggerthii
1_2_48FAA]
gi|316909035|gb|EFV30715.1| hypothetical protein HMPREF1016_00607 [Bacteroides eggerthii
1_2_48FAA]
Length = 503
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 70 KRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
K + ++IKD+ + G T TE ++A+ KGG L P+G++ TG + SN
Sbjct: 142 KNQTFVNIKDYDIDSTGNTLCTEKIQQAI---DETAKKGGV-LYFPKGIYRTGQLNMRSN 197
Query: 129 FTLFLQKGAVILGS 142
+LFL A+++GS
Sbjct: 198 LSLFLADDALLMGS 211
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++ D+G + DG T VF K ++ +KGG + +P+G + TG L +N L L
Sbjct: 58 NVMDYGAISDGVFDNTVVFNKTIKTCS---EKGGGMVLIPKGTYFTGPIHLDNNVNLHLS 114
Query: 135 KGAVILGSQELK 146
+GA I+ S K
Sbjct: 115 EGAEIVFSTNPK 126
>gi|254295109|ref|YP_003061132.1| polygalacturonase [Hirschia baltica ATCC 49814]
gi|254043640|gb|ACT60435.1| polygalacturonase [Hirschia baltica ATCC 49814]
Length = 530
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+++I+DFG GDG+T + +A+ + + G G + P G + + L SN TL+
Sbjct: 39 IVNIRDFGTKGDGSTIDSHAINRAIDHAASMG---GGMVFFPAGTYSCFTIRLKSNITLY 95
Query: 133 LQKGAVI 139
L GA+I
Sbjct: 96 LDNGAII 102
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++ FG GDGTT T +KA+ + K G + + G++L+G L SN TL +
Sbjct: 26 DVRAFGAKGDGTTKDTVAIQKAIDTCAGY--KKGGVVKLSGGIFLSGPISLKSNITLDIA 83
Query: 135 KGAVILGSQE 144
+GA +LGS +
Sbjct: 84 EGATLLGSPD 93
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 69 PKRKVVMSIKDF------GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
P ++ + +DF + DG T+ T+ +A+ A GG ++ VP G WLTG
Sbjct: 44 PIKEFIFPNRDFPINKYGAIADGKTNNTKAIARAI---AACSRAGGGRVVVPAGEWLTGP 100
Query: 123 FILTSNFTLFLQKGAVI 139
SN L L + AV+
Sbjct: 101 IHFKSNVNLHLSENAVL 117
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G V G ++ A+ A GG ++ +PEG WLTG L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 135 KGAVI 139
+GAV+
Sbjct: 104 EGAVL 108
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G V G ++ A+ A GG ++ +PEG WLTG L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---TACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 135 KGAVI 139
+GAV+
Sbjct: 104 EGAVL 108
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 77 IKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
I DFG + T + V + A + GG ++ +P G W TG L SN + L++G
Sbjct: 54 ITDFGAEEDDQQATS--QAIVTAISAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEEG 111
Query: 137 AVILGSQELK 146
A +L S++ K
Sbjct: 112 ATLLFSEDPK 121
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G V G ++ A+ A GG ++ +PEG WLTG L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 135 KGAVI 139
+GAV+
Sbjct: 104 EGAVL 108
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI ++G V G ++ A+ A GG ++ +PEG WLTG L SN L+L
Sbjct: 47 SIVNYGAVKGGEADVSDAIAGAI---AACNQAGGGRVVIPEGEWLTGPIHLKSNVNLYLA 103
Query: 135 KGAVI 139
+GAV+
Sbjct: 104 EGAVL 108
>gi|329961304|ref|ZP_08299450.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328531910|gb|EGF58730.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 490
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T V +KAV KGG + VP G++L L SN L L GA++L S
Sbjct: 37 GDGVTDNTVVIQKAV---DECSRKGGGTVLVPSGVYLIRPVELKSNVNLHLDFGALLLAS 93
Query: 143 QEL 145
L
Sbjct: 94 TRL 96
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G VGDG T ++ + A+ G + +P G + T L S+ TL
Sbjct: 144 IFNVKDYGAVGDGVTKDSKAIQDAIDACTP-----GGVVVIPAGTYYTAPLKLKSDMTLN 198
Query: 133 LQKGAVILGSQEL 145
++KGA IL S+++
Sbjct: 199 IEKGATILASRDV 211
>gi|427384862|ref|ZP_18881367.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
gi|425728123|gb|EKU90982.1| hypothetical protein HMPREF9447_02400 [Bacteroides oleiciplenus YIT
12058]
Length = 525
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++ D+GV + S T +K + GG + +P G +++G+ L +N F
Sbjct: 25 IYNVADYGVKANSGKSETASLQKIIDLCST---NGGGTVCIPTGTYISGTLFLKNNVMFF 81
Query: 133 LQKGAVILGSQEL 145
L +GAV+ GS +L
Sbjct: 82 LDRGAVLRGSSDL 94
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+S+ DFG GDG T T F A+ + A +GG ++ VPEG+W TG L N L L
Sbjct: 47 VSVADFGGSGDGHTLNTAAFADAIAALAA---RGGGRVVVPEGVWYTGPIELKDNTELHL 103
Query: 134 QKGAVILGSQE 144
++ AVI+ S +
Sbjct: 104 EQNAVIVFSDD 114
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG G G T +KA+ GG ++ VPEG++L+G+ L SN L L +GAV
Sbjct: 29 FGADGSGKKDATGAIQKAIDQAHK---AGGGRVAVPEGVFLSGALRLKSNVELHLAQGAV 85
Query: 139 ILGSQ 143
I SQ
Sbjct: 86 IKFSQ 90
>gi|160892041|ref|ZP_02073044.1| hypothetical protein BACUNI_04501 [Bacteroides uniformis ATCC 8492]
gi|156858519|gb|EDO51950.1| glycosyl hydrolase, family 43 [Bacteroides uniformis ATCC 8492]
Length = 979
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++ +G +GDG+T T +KA+ A GG + + G ++TG+ L S L
Sbjct: 58 IFDVRKYGAIGDGSTLNTTAIQKAI---DACFVAGGGTVRIAGGEYVTGTIELKSGVMLE 114
Query: 133 LQKGAVILGSQELK 146
+ KGA +LGS LK
Sbjct: 115 VAKGARLLGSTNLK 128
>gi|150004707|ref|YP_001299451.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933131|gb|ABR39829.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 625
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++ +G +GDG+T T +KA+ A GG + + G ++TG+ L S L
Sbjct: 58 IFDVRKYGAIGDGSTLNTTAIQKAI---DACFVAGGGTVRIAGGEYVTGTIELKSGVMLE 114
Query: 133 LQKGAVILGSQELK 146
+ KGA +LGS LK
Sbjct: 115 VAKGARLLGSTNLK 128
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
G G T +KA+ GG ++ VPEG++L+G+ L SN L L +GAVI S
Sbjct: 33 GSGKKDATGAIQKAIDQAHK---AGGGRVAVPEGVFLSGALRLKSNVELHLAQGAVIKFS 89
Query: 143 Q 143
Q
Sbjct: 90 Q 90
>gi|388545356|ref|ZP_10148639.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
gi|388276676|gb|EIK96255.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas sp. M47T1]
Length = 608
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V ++ +G +GDG T ++A+ +GG L +P+G++ +G+ L SN TL
Sbjct: 155 VFDVRRYGAIGDGEHLDTAAIQRAIDACT----RGGKVL-LPKGVYKSGALYLKSNMTLE 209
Query: 133 LQKGAVILGSQ 143
+ KGA +LGS+
Sbjct: 210 IAKGATLLGSE 220
>gi|16124826|ref|NP_419390.1| hypothetical protein CC_0572 [Caulobacter crescentus CB15]
gi|221233545|ref|YP_002515981.1| polygalacturonase [Caulobacter crescentus NA1000]
gi|13421768|gb|AAK22558.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220962717|gb|ACL94073.1| polygalacturonase [Caulobacter crescentus NA1000]
Length = 527
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 72 KVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
+ V +++DFG GDG T + +A+ Y ++GG + VP G + + L S
Sbjct: 33 EAVANVRDFGAKGDGVTIDSPAIDRAIAYA---AERGGGTVLVPAGTYACYTIHLKSRIR 89
Query: 131 LFLQKGAVILGS 142
L+L +GA IL +
Sbjct: 90 LYLDQGATILAA 101
>gi|372221475|ref|ZP_09499896.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 507
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 70 KRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
K + ++ DFG G +T+ + A+ +A K G + +P+G +L+GS L +N
Sbjct: 24 KNRKTYNVLDFGADSSGVALSTQAIQNAID--KATKSKDGATVLLPKGTFLSGSIELKNN 81
Query: 129 FTLFLQKGAVILGSQEL 145
L+L++G +LGS ++
Sbjct: 82 VELYLEEGTTLLGSTDI 98
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 98 RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
R V A GG ++ VP G WLTG L SN L L+KGAV+
Sbjct: 74 RAVDACHRAGGGRVVVPAGEWLTGPVHLKSNVNLHLEKGAVL 115
>gi|312621451|ref|YP_004023064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201918|gb|ADQ45245.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 446
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 73 VVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
++++I + G DG T +KA+ +KGG ++ VP G++L+ L SN TL
Sbjct: 1 MIINITELGAKPDGITFCEGAIQKAIDMCH---EKGGGRVVVPAGVYLSRPIELKSNVTL 57
Query: 132 FLQKGAVILGS 142
+L++GA++ S
Sbjct: 58 YLEEGAILKAS 68
>gi|325103538|ref|YP_004273192.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324972386|gb|ADY51370.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 632
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 47 GAEGALFNPATCVA----GLPGDQYLPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQA 102
G+ G++ + VA G P P K+ +K GD T T +KA+ A
Sbjct: 148 GSNGSMDHSMYSVAVKPIGNPPALPKPTGKIYDIVKFGAKGDNQTVNTVAIQKAIDACTA 207
Query: 103 FGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG + + +G+++TG+ L N TLF+Q G+++ S
Sbjct: 208 ---DGGGSVYIHDGIYVTGTLELKDNVTLFVQAGSILRAS 244
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++S FG V D T +TE +KA+ A G GGT + P G +L G+ + S L
Sbjct: 56 IISANSFGAVADSTRLSTEAIQKAIDECSAAG--GGTVILAP-GYYLVGALFIKSGVNLQ 112
Query: 133 LQKGAVILGSQEL 145
L KG +L S ++
Sbjct: 113 LDKGVTLLASTDI 125
>gi|195584106|ref|XP_002081856.1| GD25500 [Drosophila simulans]
gi|194193865|gb|EDX07441.1| GD25500 [Drosophila simulans]
Length = 396
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 73 VVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNV------PEGLW 118
VVM K++GV + T T +V+ + V ++ + D+ +LN+ PEG W
Sbjct: 170 VVMVTKNYGVWESPTKTQDVYDETVERIEPYADRARRKLNMCPPRPPPEGEW 221
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V++ ++ FG +GDG T + A+ K GT + +P+G +LT L S +L
Sbjct: 82 VLLDVRAFGALGDGKNDDTACIQAAIEACP----KDGT-VRIPKGRYLTRPLFLRSGLSL 136
Query: 132 FLQKGAVILG 141
+L +GAV+LG
Sbjct: 137 WLDRGAVLLG 146
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++DFG GDG T + A+ G ++ EG++LT L SN TL L
Sbjct: 84 INVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFHEGIYLTYPLFLKSNITLEL 138
Query: 134 QKGAVILGSQE 144
KGAV+LG++E
Sbjct: 139 GKGAVLLGAKE 149
>gi|398850820|ref|ZP_10607516.1| endopolygalacturonase [Pseudomonas sp. GM80]
gi|398247934|gb|EJN33366.1| endopolygalacturonase [Pseudomonas sp. GM80]
Length = 605
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 38 LSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKA 96
++R VG G E A P Q K V ++ +G GDG + T + A
Sbjct: 127 FTVRSVGTDGTESADSPPVV--------QRTSKVAAVFDVRKYGAKGDGKSLDTLAIQNA 178
Query: 97 VRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
+ G ++ +P+G + +G+ L SN T+ + +GA +LGS+
Sbjct: 179 IDACTP-----GCKVWLPKGTYKSGALYLKSNITVEIAEGATLLGSE 220
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 62 LPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLT 120
LP LP++ + +S+ DFG G+G T + + A + P G +LT
Sbjct: 28 LPSTIQLPRQTITLSVTDFGATGNGHDYDTVPIQSTI---DACPPTTTCHVKFPPGKYLT 84
Query: 121 GSFILTSNFTLFLQKGAVILGSQELK 146
+ L S L +QKGA +LG ++
Sbjct: 85 ATIHLKSKVVLEIQKGATLLGGTRME 110
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
K G + +P G +LTG+ L S+ TL L +G+V+LGSQ L+
Sbjct: 31 KPGDSVVIPAGRYLTGAIFLKSDITLHLVQGSVLLGSQHLE 71
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG T+ ++A+ A + GG +++ G+WL+G L ++ TL L+KG+ +LGS
Sbjct: 61 DGRTNDGPAIQRAI---TACSEAGGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGSS 117
Query: 144 ELK 146
+ +
Sbjct: 118 DTR 120
>gi|366165794|ref|ZP_09465549.1| dockerin type I cellulosome protein [Acetivibrio cellulolyticus
CD2]
Length = 577
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 63 PG-DQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWL 119
PG D +P++ + +++KDFG GDG T E F +A++ V A G + +PEG +L
Sbjct: 39 PGIDGGIPQKSISVNVKDFGAKGDGVTDDYEAFNEAIKSVTA-----GEAVFIPEGNYL 92
>gi|423342236|ref|ZP_17319950.1| hypothetical protein HMPREF1077_01380 [Parabacteroides johnsonii
CL02T12C29]
gi|409218150|gb|EKN11122.1| hypothetical protein HMPREF1077_01380 [Parabacteroides johnsonii
CL02T12C29]
Length = 250
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 59 VAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL 117
VAGL Y +V M FG+ DG T T ++AV Y+ +GG +L G
Sbjct: 17 VAGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYISG---QGGGRLVFYVGR 65
Query: 118 WLTGSFILTSNFTLFLQKGAVIL 140
+LTGS L SN T+ +++GA ++
Sbjct: 66 YLTGSIELKSNVTIRIEEGATLV 88
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 105 DKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
+ GG QLN+ G++ GS L S+FTLFL+ GAV+ S E
Sbjct: 33 EAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKFSHE 72
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 69 PKRKV----VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
PKR V ++++KD G+ + T V R + ++GG + +PEG W + +
Sbjct: 115 PKRPVFPDFIVNMKDKGMTEDAPITDVVNRT----IAEVSNQGGGTVVIPEGKWKSARIV 170
Query: 125 LTSNFTLFLQKGAVI 139
L SN L L KGA I
Sbjct: 171 LKSNVNLHLAKGAEI 185
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP V+S FG V D T +T+ +KA+ + GG + + G +LTG+
Sbjct: 73 GSRQLPDSSTVVSANSFGAVADSTVLSTDAIQKAI---DSCALSGGGTVTLQPGYYLTGA 129
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L + KG ++ ++
Sbjct: 130 LFVKSGVNLQISKGVTLIACSDI 152
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 77 IKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG + TE A+ A GGT + +P+G WLTG SN L L++
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAHAIA--GGTVV-IPKGEWLTGKIHFKSNVNLHLEE 108
Query: 136 GAVILGSQE 144
GA +L S++
Sbjct: 109 GATLLFSED 117
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 77 IKDFGVGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G +G + T+ A+ +A GG ++ VP G+WLTG SN L+L++
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 136 GAVI 139
A++
Sbjct: 111 NAIL 114
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 71 RKVVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+K +I ++G DG + T+ KA+ KGG + VP G WLTG L +N
Sbjct: 42 KKDTFNITNYGAKPDGISLNTDAINKAI---SDCSKKGGGVVLVPNGYWLTGPIKLQNNV 98
Query: 130 TLFLQKGAVILGSQEL 145
L L+K A++ S+
Sbjct: 99 NLHLKKNALLQFSKNF 114
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V ++++ FG GDG T + A+ A K G ++ +PEG +L S L S+FTL
Sbjct: 80 VTLNVRRFGAKGDGIHDDTLAIQTAI----ASCPKDG-RVYIPEGKYLVTSLFLKSDFTL 134
Query: 132 FLQKGAVILGSQE 144
+ K AV+LG E
Sbjct: 135 DIGKNAVLLGHAE 147
>gi|224536494|ref|ZP_03677033.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223623|ref|ZP_17210092.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224521896|gb|EEF91001.1| hypothetical protein BACCELL_01369 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638248|gb|EIY32095.1| hypothetical protein HMPREF1062_02278 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 72 KVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
K V +I D+G + D T +T +KA+ GG + VP G +LT S +L SN
Sbjct: 22 KAVYNIMDYGAIADTTILSTNAIQKAI---DECAKNGGGVVWVPSGNYLTTSVVLRSNVN 78
Query: 131 LFLQKGAVILGSQEL 145
L L G+ + S+ +
Sbjct: 79 LHLDAGSALYASRRV 93
>gi|218259494|ref|ZP_03475217.1| hypothetical protein PRABACTJOHN_00875 [Parabacteroides johnsonii
DSM 18315]
gi|218225087|gb|EEC97737.1| hypothetical protein PRABACTJOHN_00875 [Parabacteroides johnsonii
DSM 18315]
Length = 250
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 59 VAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL 117
VAGL Y +V M FG+ DG T T ++AV Y+ +GG +L G
Sbjct: 17 VAGLSAKDY----QVAM----FGIKSDGVTLNTRSIQRAVDYISG---QGGGRLVFYVGR 65
Query: 118 WLTGSFILTSNFTLFLQKGAVIL 140
+LTGS L SN T+ +++GA ++
Sbjct: 66 YLTGSIELKSNVTIRIEEGATLV 88
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 69 PKRKV----VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
PKR V ++++KD G+ + T V R + ++GG + +PEG W + +
Sbjct: 101 PKRPVFPDFIVNMKDKGMTEDAPITDVVNRT----IAEVSNQGGGTVVIPEGKWKSARIV 156
Query: 125 LTSNFTLFLQKGAVI 139
L SN L L KGA I
Sbjct: 157 LKSNVNLHLAKGAEI 171
>gi|294674947|ref|YP_003575563.1| polygalacturonase/beta-xylosidase [Prevotella ruminicola 23]
gi|294474354|gb|ADE83743.1| putative polygalacturonase/beta-xylosidase [Prevotella ruminicola
23]
Length = 936
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+IK +G D T +T ++A+ A GG ++ VP G++ G+ L S+ L+L+
Sbjct: 22 NIKSYGAQNDTTVLSTHALQQAIDACSA---AGGGRVVVPAGIYKIGTIQLKSHVHLYLE 78
Query: 135 KGAVILGSQELK 146
+GA + GS L+
Sbjct: 79 QGATLYGSTRLE 90
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 77 IKDFGVGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G +G + T+ A+ +A GG ++ VP G+WLTG SN L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 136 GAVI 139
A++
Sbjct: 111 NAIL 114
>gi|325300092|ref|YP_004260009.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319645|gb|ADY37536.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 444
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDK----GGTQLNVPEGLWLTGSFILTSNFTL 131
I D+GV D T TE +QA DK GG + +P+G +L+GS N L
Sbjct: 54 ITDYGVVNDSTVIQTE-------RIQAVIDKASQAGGGVVYIPQGTYLSGSLFFKPNTHL 106
Query: 132 FLQKGAVILGSQEL 145
+++KG + GS ++
Sbjct: 107 YIEKGGTLKGSDDI 120
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 77 IKDFGVGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G +G + T+ A+ +A GG ++ VP G+WLTG SN L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 136 GAVI 139
A++
Sbjct: 111 NAIL 114
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 77 IKDFGVGDG-TTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G +G + T+ A+ +A GG ++ VP G+WLTG SN L+L++
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAI---EACHKSGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 136 GAVI 139
A++
Sbjct: 111 NAIL 114
>gi|238917799|ref|YP_002931316.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238873159|gb|ACR72869.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 411
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 77 IKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
I D+G+ D T+ F+K + V + GG + +P G ++TG+ L+++ G
Sbjct: 36 ITDYGIHDDGRIYTDNFQKLIDLVY---NAGGGVIVIPHGTYITGALFFRQGVNLYIEGG 92
Query: 137 AVILGSQEL 145
A ++GS ++
Sbjct: 93 ATLMGSDDI 101
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI+++G G +T+ A++ A + GG ++ VP+G++LTG+ L SN L L+
Sbjct: 60 SIEEYGAEAGGEVLSTDAIAAAIK---ACNEAGGGRVVVPKGVYLTGAVHLLSNVNLHLE 116
Query: 135 KGAVILGSQELK 146
+GA + S+ K
Sbjct: 117 EGATLRFSRNPK 128
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFG +GDG + TE F A+ + G GGT L +P GLWLTG L S L
Sbjct: 30 NIADFGAIGDGLSDNTEAFAAAIEACASQG--GGTVL-IPAGLWLTGPIRLQSGIRLHAD 86
Query: 135 KGAVI 139
GA++
Sbjct: 87 AGALV 91
>gi|390960072|ref|YP_006423829.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414990|gb|AFL90494.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 571
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 40 LRRVGFSGAEGA--LFNPATCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKA 96
LR G S A GA L P + G +V +++ FG GDG T + +A
Sbjct: 9 LRMAGLSVAGGAVALGQPVVAQSARRGAVATAAHEVYFNVRSFGATGDGVTIDSPAVNRA 68
Query: 97 VRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
+ +A GG + P G++ S L SN LFLQ+GA IL +
Sbjct: 69 I---EAAAGAGGGTVVFPAGVYACFSVRLRSNVALFLQQGATILAA 111
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ ++DFG GDG T T + A+ +GGT + P G +L L SN T+
Sbjct: 81 VVDVRDFGAKGDGKTLDTFAVQAAIMSCP----EGGTVV-FPPGTYLLTPVFLKSNLTIE 135
Query: 133 LQKGAVILGSQE 144
+QK AV+LG E
Sbjct: 136 IQKDAVLLGVSE 147
>gi|182415528|ref|YP_001820594.1| exo-poly-alpha-D-galacturonosidase [Opitutus terrae PB90-1]
gi|177842742|gb|ACB76994.1| exo-poly-alpha-D-galacturonosidase precursor [Opitutus terrae
PB90-1]
Length = 537
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
MS++DFG GDG T T +A+ A GG + P G +L+ S L S+ L L
Sbjct: 1 MSVRDFGATGDGVTLDTAAINRAI---TATAQAGGGVVEFPAGQYLSHSIRLQSHVELRL 57
Query: 134 QKGAVILGS 142
+ GA ++ +
Sbjct: 58 EPGATLIAA 66
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 74 VMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ +I D+G DG+ T+ FR+A++ +A G GGT + VP G + +G L SN TL
Sbjct: 30 LFNIADYGAKKDGSAPATDAFRQAIQAAKAAG--GGT-IYVPPGRYTSGPIELFSNMTLD 86
Query: 133 LQKGAVI 139
+ GA +
Sbjct: 87 IDAGARV 93
>gi|312794448|ref|YP_004027371.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181588|gb|ADQ41758.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 446
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 73 VVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++ I G DG T +KA+ +KGG ++ VP G++L+ L SN TL
Sbjct: 1 MIIDITQLGAKPDGITFCEGAIQKAIDMCH---EKGGGKVIVPAGVYLSRPIELKSNVTL 57
Query: 132 FLQKGAVILGSQELK 146
+L++GA++ S ++
Sbjct: 58 YLEEGAILKASPHIE 72
>gi|319953995|ref|YP_004165262.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422655|gb|ADV49764.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 459
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ IK+FG GD T T+ +KA+ GG + + EG++ +G+ +L N TL
Sbjct: 31 IYDIKNFGAKGDSITINTKAIQKAI---DKCSKNGGGIVVIKEGVYSSGTILLKDNVTLQ 87
Query: 133 LQKGAVILGS 142
+ K A +LGS
Sbjct: 88 IDKSAKLLGS 97
>gi|29349557|ref|NP_813060.1| exo-poly-alpha-D-galacturonosidase, partial [Bacteroides
thetaiotaomicron VPI-5482]
gi|29341467|gb|AAO79254.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 352
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP K+++S FG V D T +TE +KA+ G GGT + P G + TG+
Sbjct: 47 GSRQLPGDKMIISANSFGAVADSTVLSTEAIQKAIDSCAVSG--GGTVVLQP-GYYQTGA 103
Query: 123 FILTSNFTLFLQKGAVILGSQELK 146
+ S L + KG +L S ++
Sbjct: 104 LFVKSGVNLQIGKGVTLLASPDIH 127
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVF-RKAVRY-VQAFGDKGGTQLNVPEGLWLTGSFIL 125
P R V +IKDFG +G E+F +A+ + GG + VP G +LTG L
Sbjct: 42 FPDR--VYNIKDFGAKEGNNG--EIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITL 97
Query: 126 TSNFTLFLQKGAVILGSQE 144
SN L L++GA + S E
Sbjct: 98 KSNVNLHLEEGAYLKFSSE 116
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
++ D+G T TE F+KA+ D+GG ++ VP G +++G L SN +
Sbjct: 11 NVNDYGAIGNHTLCTEAFQKAI---DTASDRGGGKVIVPAGDYVSGPLFLRSNIEFEVCS 67
Query: 136 GAVILGSQEL 145
GA I S ++
Sbjct: 68 GATIYFSNDI 77
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVF-RKAVRY-VQAFGDKGGTQLNVPEGLWLTGSFIL 125
P R V +IKDFG +G E+F +A+ + GG + VP G +LTG L
Sbjct: 42 FPDR--VYNIKDFGAKEGNNG--EIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITL 97
Query: 126 TSNFTLFLQKGAVILGSQE 144
SN L L++GA + S E
Sbjct: 98 KSNVNLHLEEGAYLKFSSE 116
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVF-RKAVRY-VQAFGDKGGTQLNVPEGLWLTGSFIL 125
P R V +IKDFG +G E+F +A+ + GG + VP G +LTG L
Sbjct: 42 FPDR--VYNIKDFGAKEGNNG--EIFCHEAINLAILTCSQAGGGTVLVPPGEFLTGPITL 97
Query: 126 TSNFTLFLQKGAVILGSQE 144
SN L L++GA + S E
Sbjct: 98 KSNVNLHLEEGAYLKFSSE 116
>gi|397656507|ref|YP_006497209.1| exo-poly-alpha-D-galacturonosidase [Klebsiella oxytoca E718]
gi|394345096|gb|AFN31217.1| Exo-poly-alpha-D-galacturonosidase precursor [Klebsiella oxytoca
E718]
Length = 658
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ FG GDGTT T+ ++A+ G ++ + +G + TG+ L S+ TL
Sbjct: 163 IIEASTFGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVVISDGEFKTGALFLHSDMTLE 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|375259440|ref|YP_005018610.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
KCTC 1686]
gi|365908918|gb|AEX04371.1| Fibronectin type III domain protein [Klebsiella oxytoca KCTC 1686]
Length = 658
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ FG GDGTT T+ ++A+ G ++ + +G + TG+ L S+ TL
Sbjct: 163 IIEASTFGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVVISDGEFKTGALFLHSDMTLE 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 64 GDQYLPKRKVVMSIKDFGVGDGTTS-TTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + P+ +V + +DFG+ TT +TE ++AV A GG + + +G + TG+
Sbjct: 41 GARTFPEGRV-FNAEDFGLEQDTTKLSTEAIQRAV---DACSRAGGGIVAIKKGYYRTGA 96
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ L L+KGAV++ S++
Sbjct: 97 LFIKGGVNLRLEKGAVLIASEDF 119
>gi|423226672|ref|ZP_17213137.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392628199|gb|EIY22233.1| hypothetical protein HMPREF1062_05323 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 486
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DG T T + + Y+ +GG L G +LTGS L SN + L++GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 139 ILGS 142
++GS
Sbjct: 84 LVGS 87
>gi|224537416|ref|ZP_03677955.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520942|gb|EEF90047.1| hypothetical protein BACCELL_02294 [Bacteroides cellulosilyticus
DSM 14838]
Length = 486
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DG T T + + Y+ +GG L G +LTGS L SN + L++GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGINYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 139 ILGS 142
++GS
Sbjct: 84 LVGS 87
>gi|358065987|ref|ZP_09152521.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
gi|356695850|gb|EHI57475.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
Length = 425
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 73 VVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
++ +I ++G VGDG T +KA+ KGG ++ +P G +L+G L SN L
Sbjct: 1 MIYNILEYGAVGDGKTDCAAAIQKAIDRCSV---KGG-RVVIPAGRFLSGFLQLKSNVEL 56
Query: 132 FLQKGAVI---LGSQELK 146
+L+ GAV+ L +E K
Sbjct: 57 YLEHGAVLVSDLSDEEAK 74
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
P R V +IKDFG +G + GG + VP G +LTG L S
Sbjct: 42 FPDR--VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEFLTGPITLKS 99
Query: 128 NFTLFLQKGAVILGSQE 144
N L L++GA + S E
Sbjct: 100 NVNLHLEEGAYLKFSSE 116
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
P R V +IKDFG +G + GG + VP G +LTG L S
Sbjct: 42 FPDR--VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEFLTGPITLKS 99
Query: 128 NFTLFLQKGAVILGSQE 144
N L L++GA + S E
Sbjct: 100 NVNLHLEEGAYLKFSSE 116
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
P R V +IKDFG +G + GG + VP G +LTG L S
Sbjct: 42 FPDR--VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTGGGTVLVPPGEFLTGPITLKS 99
Query: 128 NFTLFLQKGAVILGSQE 144
N L L++GA + S E
Sbjct: 100 NVNLHLEEGAYLKFSSE 116
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++ I+D G + T + A+ V A GGT L +P G W +G L S+ TL +
Sbjct: 85 LVDIRDHGARPDSNDNTTAIQSAIAAVPA----GGT-LRLPAGSWTSGPLFLKSDMTLLI 139
Query: 134 QKGAVILGS 142
++GAV+ S
Sbjct: 140 EEGAVLQDS 148
>gi|427388107|ref|ZP_18883990.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
gi|425724690|gb|EKU87564.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
Length = 487
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T + +KAV KGG + +P G +L L SN L L G ++LGS
Sbjct: 34 GDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLLLGS 90
Query: 143 QEL 145
L
Sbjct: 91 TRL 93
>gi|423226766|ref|ZP_17213231.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627039|gb|EIY21080.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 487
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T + +KAV KGG + +P G +L L SN L L G ++LGS
Sbjct: 34 GDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLLLGS 90
Query: 143 QEL 145
L
Sbjct: 91 TRL 93
>gi|224537538|ref|ZP_03678077.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520851|gb|EEF89956.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
Length = 496
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T + +KAV KGG + +P G +L L SN L L G ++LGS
Sbjct: 43 GDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLLLGS 99
Query: 143 QEL 145
L
Sbjct: 100 TRL 102
>gi|189465212|ref|ZP_03013997.1| hypothetical protein BACINT_01557 [Bacteroides intestinalis DSM
17393]
gi|189437486|gb|EDV06471.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 487
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T + +KAV KGG + +P G +L L SN L L G ++LGS
Sbjct: 34 GDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSNVNLHLDFGTLLLGS 90
Query: 143 QEL 145
L
Sbjct: 91 TRL 93
>gi|329851964|ref|ZP_08266645.1| tat twin-arginine translocation pathway signal sequence domain
protein [Asticcacaulis biprosthecum C19]
gi|328839813|gb|EGF89386.1| tat twin-arginine translocation pathway signal sequence domain
protein [Asticcacaulis biprosthecum C19]
Length = 510
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++DFG GDGTT T A+ ++ + +GG L P G + + L S+ L+L
Sbjct: 36 LNVRDFGARGDGTTIDTPAVNAAIDHLAS---RGGGTLYFPAGSYACYTIRLKSHIRLYL 92
Query: 134 QKGAVILGS 142
GAVI+ +
Sbjct: 93 DAGAVIVAA 101
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 70 KRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
K +S++DFG GDG + T + A+ + G +L PEG++LT +L S+
Sbjct: 72 KESCAVSVRDFGAKGDGFSDDTVSIQTAINCLPNNG-----RLYFPEGVYLTAPIVLKSH 126
Query: 129 FTLFLQKGAVILG 141
TL + + A +LG
Sbjct: 127 ITLDISEKAKLLG 139
>gi|295132878|ref|YP_003583554.1| glycoside hydrolase [Zunongwangia profunda SM-A87]
gi|294980893|gb|ADF51358.1| glycoside hydrolase family protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL-WLTGSFILTSNFTLFL 133
+I+DFG V D T+ + +K + Y A G G ++ +P G +L+G F L SN L L
Sbjct: 5 NIQDFGAVNDDFTNNSVSIQKTIDYCAALG---GGKVVIPAGKPYLSGPFNLKSNIELHL 61
Query: 134 QKGAVI 139
+ GAV+
Sbjct: 62 EHGAVL 67
>gi|125973158|ref|YP_001037068.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256003955|ref|ZP_05428941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281417352|ref|ZP_06248372.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385778934|ref|YP_005688099.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419723050|ref|ZP_14250185.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725046|ref|ZP_14252101.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713383|gb|ABN51875.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255992083|gb|EEU02179.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408754|gb|EFB39012.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940614|gb|ADU74648.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771666|gb|EIC05531.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380780817|gb|EIC10480.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 582
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 68 LPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
+P + VV ++KDFG GDG T + F+KAV V K G + +P G +L S I
Sbjct: 44 IPTKPVVANVKDFGAKGDGLTDDSNAFKKAVESV-----KDGGAVLIPSGEYLIKSKI 96
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 67 YLPKRKVVMSIKDFGVGDGTTS--TTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
++ + ++ +++ DFG + +++ TT + + QA GG + P G +LTG
Sbjct: 15 FVAQAQLALNVLDFGAKNDSSALATTAIKEAIAKASQA----GGGTIYFPPGTYLTGPIH 70
Query: 125 LTSNFTLFLQKGA 137
L SN TLF++ GA
Sbjct: 71 LKSNITLFIEAGA 83
>gi|340345895|ref|ZP_08669025.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433651736|ref|YP_007278115.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339612882|gb|EGQ17678.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433302269|gb|AGB28085.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 480
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+++ FG VG+GT + A+ F GG ++ +P G +L+GS L SN L L+
Sbjct: 23 NVRQFGAVGNGTVLDSRAINAAID-TAVF--HGGGRVVLPAGTYLSGSIRLKSNVELHLE 79
Query: 135 KGAVILGSQE 144
GAV+L + +
Sbjct: 80 PGAVLLATSD 89
>gi|227327885|ref|ZP_03831909.1| exo-poly-alpha-D-galacturonosidase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 659
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG T+ T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGVTNDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA++LGS
Sbjct: 223 AKGAILLGS 231
>gi|294675387|ref|YP_003576003.1| endo-polygalacturonase [Prevotella ruminicola 23]
gi|294472104|gb|ADE81493.1| putative endo-polygalacturonase [Prevotella ruminicola 23]
Length = 480
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 70 KRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
K K +S +D V TT + + + + KGG L + G +LTG +L S
Sbjct: 21 KVKTTISTRDLQVD--TTGQSLCTNQLQQAIDRLAKKGGGTLLLAPGHYLTGGLMLRSGI 78
Query: 130 TLFLQKGAVILGS 142
TL +GAV+LGS
Sbjct: 79 TLQFDEGAVLLGS 91
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 50 GALFNPATCVAGLPGDQYLP-------KRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQA 102
A+ C +GL Q LP K+ K V DG T+ A+ A
Sbjct: 8 AAVLGLMACSSGLSA-QKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAI---DA 63
Query: 103 FGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
KGG + VP GLW TG L SN L L+KGAV+
Sbjct: 64 CNKKGGGVVVVPAGLWATGPITLKSNVNLHLKKGAVL 100
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ A GG ++ VP G+WLTG SN L L++
Sbjct: 56 ITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLEE 112
Query: 136 GAVI 139
AV+
Sbjct: 113 NAVL 116
>gi|356533465|ref|XP_003535284.1| PREDICTED: uncharacterized protein LOC100813746 [Glycine max]
Length = 398
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLW 118
RK + DFG VGDG TS T+ F+ A+ + + GG L VP G W
Sbjct: 135 RKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYAFDGGALLVVPPGKW 183
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
V DG T T + A+ +GGT + VP G + T S + S TL+L+KGAV+LG
Sbjct: 90 VADGETDNTGRLQAALSTCP----RGGT-VYVPAGRYRTASLFMKSCTTLYLEKGAVLLG 144
Query: 142 SQE 144
+
Sbjct: 145 DND 147
>gi|365921621|ref|ZP_09445886.1| type I secretion target GGXGXDXXX repeat-containing domain protein,
partial [Cardiobacterium valvarum F0432]
gi|364575767|gb|EHM53138.1| type I secretion target GGXGXDXXX repeat-containing domain protein,
partial [Cardiobacterium valvarum F0432]
Length = 1068
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 20/91 (21%)
Query: 66 QYLPK--RKVVMSIKD--FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWL- 119
+Y+PK V ++KD +G GDG T T +KA+ V A KGG +++P G +L
Sbjct: 184 EYVPKPTTDFVANVKDAEYGAKGDGKTDDTAAIQKAIDAVAA---KGGGIVDIPNGTYLI 240
Query: 120 -----------TGSFILTSNFTLFLQKGAVI 139
T +L SN TL + G V+
Sbjct: 241 DAMRQETSSYETSGLVLKSNVTLRMADGTVL 271
>gi|375149153|ref|YP_005011594.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361063199|gb|AEW02191.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 558
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ +++DFG GDG T T+ + A+ + GGT L +P G ++ G+ L SN TL
Sbjct: 50 IFNVRDFGAKGDGKTLNTKAIQAAIDACNK--ENGGTVL-IPAGDFICGTVELKSNVTLH 106
Query: 133 LQKGAVILGS 142
L +LGS
Sbjct: 107 LSAQGRLLGS 116
>gi|398868856|ref|ZP_10624247.1| endopolygalacturonase [Pseudomonas sp. GM78]
gi|398232390|gb|EJN18358.1| endopolygalacturonase [Pseudomonas sp. GM78]
Length = 607
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 38 LSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKA 96
++R VG G E A +PA Q + +++ G GDG+T T ++A
Sbjct: 127 FTVRSVGSDGKESA-DSPAVV-------QRTTAVPALFDVREQGAKGDGSTLDTAAIQRA 178
Query: 97 VRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
+ G ++ +P G + +G+ L SN TL + +GA +LGS+
Sbjct: 179 IDACTP-----GCKVLLPAGTYKSGALYLKSNMTLEIAEGATLLGSE 220
>gi|357450135|ref|XP_003595344.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355484392|gb|AES65595.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 297
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 105 DKGGTQLNVPEGLWLTGSFILTSNFT 130
D GG QLNVP GLWLT F LTS+ +
Sbjct: 146 DGGGAQLNVPPGLWLTAPFNLTSHMS 171
>gi|427385173|ref|ZP_18881678.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
gi|425727341|gb|EKU90201.1| hypothetical protein HMPREF9447_02711 [Bacteroides oleiciplenus YIT
12058]
Length = 486
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAV 138
FG+ DG T T + + Y+ +GG L G +LTGS L SN + L++GAV
Sbjct: 27 FGIKSDGVTLNTNSIQTGIDYIH---KEGGGVLVFNVGRYLTGSIELKSNVAIQLKEGAV 83
Query: 139 ILGS 142
++GS
Sbjct: 84 LVGS 87
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 81 GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G DG T T+ +KAV +G GG L + +G+WL+G L SN T L +G V+
Sbjct: 21 GRADGNTINTDAIQKAVDMCAQYG--GGVVL-LSKGVWLSGPITLKSNITFSLGQGTVL 76
>gi|333380566|ref|ZP_08472257.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826561|gb|EGJ99390.1| hypothetical protein HMPREF9455_00423 [Dysgonomonas gadei ATCC
BAA-286]
Length = 505
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KDFG + DG T TT +KA+ +GG + VP+G +L G+ L S+
Sbjct: 22 IYNVKDFGALNDGKTLTTIYIQKAIDQCSY---EGGGVVYVPKGNYLVGTINLKSDVEFR 78
Query: 133 LQKGAVILGSQEL 145
+ GA ++ + +L
Sbjct: 79 FETGATLVATTDL 91
>gi|284040211|ref|YP_003390141.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283819504|gb|ADB41342.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 442
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 71 RKVVMS-------IKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
RKV +S I D+GVG D T TE +K + GG + +P+G +++G+
Sbjct: 42 RKVSLSQLGKRYVITDYGVGSDSTRVQTEAIQKVIDLA---ARNGGGIVVIPKGTFMSGA 98
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
L L +GAV+ GS ++
Sbjct: 99 LFFKPKTHLHLAEGAVLKGSNDI 121
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+I D G G T + ++ + + A G GGT L +P+G W TG L S+ L L++
Sbjct: 73 NIADLGAKAGA-QVTAIIQQGIDELSATG--GGT-LRIPKGKWKTGRIALKSHVNLHLEE 128
Query: 136 GAVILGSQELK 146
GA + S E+K
Sbjct: 129 GAELYFSGEIK 139
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + LP V+S FG V D T +T +KA+ + GG + + G +LTG+
Sbjct: 73 GSRQLPDSSTVVSANSFGAVADSTVLSTNAIQKAI---DSCALSGGGTVTLQPGYYLTGA 129
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L + KG ++ ++
Sbjct: 130 LFVKSGVNLQISKGVTLIACPDI 152
>gi|375144070|ref|YP_005006511.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058116|gb|AEV97107.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 511
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I FG GD +T+ T +KA+ A GG ++ +P G ++TG L SN L +
Sbjct: 26 ITTFGAKGDSSTNNTVAIQKAIDEASA---NGGGRVVIPAGRFVTGVLNLKSNVELHVSA 82
Query: 136 GAVILGSQE 144
A++LGS +
Sbjct: 83 NAMLLGSTK 91
>gi|260584885|ref|ZP_05852630.1| cell wall surface anchor protein [Granulicatella elegans ATCC
700633]
gi|260157542|gb|EEW92613.1| cell wall surface anchor protein [Granulicatella elegans ATCC
700633]
Length = 715
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 72 KVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI-LTSNF 129
K +++K+FG VGDG T E +KA+ A GG +L PEG +L I L SN
Sbjct: 80 KDFINVKEFGAVGDGITDDQEAIQKAID--AATKGLGGGKLYFPEGTYLVKKIIQLKSNI 137
Query: 130 TLFLQKGAVILGSQELK 146
+ L A IL K
Sbjct: 138 DIRLDDKATILNGINFK 154
>gi|242238419|ref|YP_002986600.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242130476|gb|ACS84778.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 448
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG+ T + + R + D GG L V G++ TG+ +L S+F L L GA +L S
Sbjct: 13 DGSVLVTALLQ---RMIDKIHDAGGGTLIVTPGIYRTGTLVLPSDFCLQLDAGATLLASA 69
Query: 144 E 144
+
Sbjct: 70 D 70
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 69 PKRKV----VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
PKR V ++++KD G+ + T V R + +GG + +PEG W + +
Sbjct: 440 PKRPVFPDFIVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIV 495
Query: 125 LTSNFTLFLQKGAVI 139
L SN L L KGA I
Sbjct: 496 LKSNVNLHLAKGAEI 510
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 69 PKRKV----VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
PKR V ++++KD G+ + T V R + +GG + +PEG W + +
Sbjct: 440 PKRPVFPDFIVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIV 495
Query: 125 LTSNFTLFLQKGAVI 139
L SN L L KGA I
Sbjct: 496 LKSNVNLHLAKGAEI 510
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 69 PKRKV----VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFI 124
PKR V ++++KD G+ + T V R + +GG + +PEG W + +
Sbjct: 440 PKRPVFPDFIVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIV 495
Query: 125 LTSNFTLFLQKGAVI 139
L SN L L KGA I
Sbjct: 496 LKSNVNLHLAKGAEI 510
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ A GG ++ VP G+WLTG SN L L++
Sbjct: 43 ITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNINLCLEE 99
Query: 136 GAVI 139
AV+
Sbjct: 100 DAVL 103
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+ I DFG GDG + + F A + GG +L VP+G+W +G + S+ TL L
Sbjct: 4 VKIDDFGGKGDGKFNNSNAFALAFAEISR---NGGGKLTVPKGVWASGPIEIPSDTTLEL 60
Query: 134 QKGAVI 139
++G+ I
Sbjct: 61 EEGSEI 66
>gi|421728104|ref|ZP_16167260.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
M5al]
gi|410371064|gb|EKP25789.1| fibronectin type III domain-containing protein [Klebsiella oxytoca
M5al]
Length = 658
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ FG GDGTT T+ ++A+ G ++ + G + TG+ L S+ TL
Sbjct: 163 VIEASTFGAKGDGTTLNTQALQRAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLD 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|17978817|gb|AAL49975.1| polygalacturonase [Klebsiella oxytoca]
Length = 658
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ FG GDGTT T+ ++A+ G ++ + G + TG+ L S+ TL
Sbjct: 163 VIEASTFGAKGDGTTLNTQALQRAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLD 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 74 VMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V I+ FG DG T +T A+ A GG + +P G +LTG L S+ L
Sbjct: 7 VFDIRTFGAQPDGETPSTAAITAAIETCAA---AGGGVVYIPAGRFLTGPLRLKSHVRLH 63
Query: 133 LQKGAVILGSQE 144
L+ GA +L SQ+
Sbjct: 64 LEAGAHLLFSQD 75
>gi|256848396|ref|ZP_05553838.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
gi|256714663|gb|EEU29642.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
Length = 409
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG Q+ +PEG ++ S IL SN L L+ GA ++GS
Sbjct: 36 HGGGQVIIPEGRYIIDSLILKSNVDLHLESGAELIGS 72
>gi|344995464|ref|YP_004797807.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963683|gb|AEM72830.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 446
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 73 VVMSIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
+++ I G DG T +KA+ +KGG ++ VP G++L+ L SN TL
Sbjct: 1 MIIDITQLGAKPDGITFCEGAIQKAIDMCH---EKGGGKVIVPAGVYLSRPIELKSNVTL 57
Query: 132 FLQKGAVILGSQELK 146
+L++GA + S ++
Sbjct: 58 YLEEGATLKASPHIE 72
>gi|319953998|ref|YP_004165265.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422658|gb|ADV49767.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 463
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG-LWLTGSFILTSNFTLFL 133
++ D+G GDGT+ T+ + A+ A GG + +P G L G+ L + TL++
Sbjct: 22 NVLDYGAKGDGTSKDTKAVQAAI---DACTKNGGGNVIIPAGKTVLIGTIYLKNFVTLYI 78
Query: 134 QKGAVILGS 142
+ GAV+LGS
Sbjct: 79 ENGAVLLGS 87
>gi|389815882|ref|ZP_10207130.1| hypothetical protein A1A1_03677 [Planococcus antarcticus DSM 14505]
gi|388465605|gb|EIM07921.1| hypothetical protein A1A1_03677 [Planococcus antarcticus DSM 14505]
Length = 517
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 75 MSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
++I D+G VGDG T TE F+K AFG KG ++ VP G++L L S
Sbjct: 108 VNISDYGAVGDGETDCTEAFKK------AFG-KGSVEVKVPAGVYLVDGLKLPS 154
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I FG DG T T+ RKA+ G G ++ EG +LTG+ L SN L ++K
Sbjct: 53 ITRFGARADGKTDCTDAIRKAIDEAARVG---GGRVMAREGAFLTGAIHLKSNVNLVVEK 109
Query: 136 GAVILGSQELK 146
GA + S + K
Sbjct: 110 GATLRFSPDPK 120
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+K +G GDG T T +KA+ A G GGT + ++++G +L S+ TL +
Sbjct: 24 DVKAYGATGDGVTKDTAAIQKAIDDCAAAG--GGTVVLAGAPMYVSGPLVLKSHITLSIA 81
Query: 135 KGAVILGSQE 144
G + GS+E
Sbjct: 82 TGTTLAGSEE 91
>gi|374313006|ref|YP_005059436.1| hypothetical protein [Granulicella mallensis MP5ACTX8]
gi|358755016|gb|AEU38406.1| hypothetical protein AciX8_4125 [Granulicella mallensis MP5ACTX8]
Length = 573
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +++ +G GDG T T KA+ V A G GGT L P G ++ + L S L+
Sbjct: 51 VFNVRTYGATGDGKTVDTPAINKAIEAVAAAG--GGTLL-FPAGTYMCFTIHLRSRVDLY 107
Query: 133 LQKGAVILGSQELK 146
L +G IL + K
Sbjct: 108 LSRGCTILAADSPK 121
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G + T+ A+ A GG ++ VP G WLTG SN L L++
Sbjct: 46 ITDFGAVPGGEVNNTQAIAAAI---DACNKAGGGRVVVPAGTWLTGPVHFKSNVNLCLEE 102
Query: 136 GAVI 139
AV+
Sbjct: 103 NAVL 106
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 51 ALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGT 109
AL A+C + ++ ++ +FG GDG T + + R + A GGT
Sbjct: 14 ALLMVASC------NMLFAEKSKTFNVTNFGAKGDGITLDSPAIQ---RTIDAAAKSGGT 64
Query: 110 QLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
+ G +L+GS + S TL + KG ILGSQ++
Sbjct: 65 VV-FRAGTYLSGSIFVKSGVTLRVDKGVTILGSQKI 99
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 77 IKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
I DFG T+ R A+ A GG ++ VP G WLTG+ L SN L + KG
Sbjct: 450 ITDFG-AKPDADCTDAIRAAI---DACHQAGGGRVVVPAGEWLTGAIHLRSNVNLHVAKG 505
Query: 137 AVI 139
A +
Sbjct: 506 ATL 508
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG V G T+ A+ A GG ++ VP G+WLTG SN L L++
Sbjct: 54 ITDFGAVPGGEVDNTKAIAAAI---DACNKAGGGRVVVPAGIWLTGPVHFKSNVNLCLEE 110
Query: 136 GAVI 139
AV+
Sbjct: 111 DAVL 114
>gi|345300045|ref|YP_004829403.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093982|gb|AEN65618.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 441
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
GG L V GL+LTG+ +L+S+ TL L+ GA +L S
Sbjct: 33 GGGTLVVTPGLYLTGTLVLSSHITLHLEAGARLLASH 69
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
GG ++ VPEG+W TG L SN L LQK AV+
Sbjct: 89 GGGRVVVPEGVWSTGPVHLKSNVNLHLQKNAVL 121
>gi|427407417|ref|ZP_18897619.1| hypothetical protein HMPREF9718_00093 [Sphingobium yanoikuyae ATCC
51230]
gi|425714220|gb|EKU77229.1| hypothetical protein HMPREF9718_00093 [Sphingobium yanoikuyae ATCC
51230]
Length = 529
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ ++ FG GDGT + KA+ +V G GGT + P G + + + + S TLF
Sbjct: 42 IVDVRQFGAKGDGTAIDSGAINKAIDHVAGLG--GGT-VYFPAGSYASYTIRMKSRVTLF 98
Query: 133 LQKGAVILGS 142
L GAV+L +
Sbjct: 99 LADGAVLLAA 108
>gi|359413926|ref|ZP_09206391.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
gi|357172810|gb|EHJ00985.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
Length = 448
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
DG T+ E +K + A GG ++ +P+G +L+G+ IL SN L L+ GA +
Sbjct: 14 DGITNNREAIQKTIDECTA---GGGGRVIIPKGNFLSGTLILKSNIDLHLESGAYL 66
>gi|229589775|ref|YP_002871894.1| exo-poly-alpha-D-galacturonosidase [Pseudomonas fluorescens SBW25]
gi|229361641|emb|CAY48521.1| exo-poly-alpha-D-galacturonosidase precursor [Pseudomonas
fluorescens SBW25]
Length = 600
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
VV +K +G GDG T ++A+ G ++ +P+G + +G+ L SN TL
Sbjct: 149 VVFDVKHYGAKGDGIHLDTLAIQRAIDACTV-----GGKVLLPKGTYKSGALYLKSNMTL 203
Query: 132 FLQKGAVILGSQ 143
+ GA +LGS+
Sbjct: 204 EIADGATLLGSE 215
>gi|251788461|ref|YP_003003182.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247537082|gb|ACT05703.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 444
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
DG T T +F++A+ + A +GG L V G +L G L SNF L L GA ++ S
Sbjct: 12 ADGITPDTALFQQAIDELAA---QGGGTLVVEPGRYLLGGLHLPSNFCLQLDAGAELIAS 68
Query: 143 QE 144
+
Sbjct: 69 AD 70
>gi|265754983|ref|ZP_06089897.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513278|ref|ZP_08792800.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229437102|gb|EEO47179.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263234594|gb|EEZ20173.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 75 MSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+++KD+ + T+ + R + KGG ++ +P G W +G +L SN L L+
Sbjct: 67 VNVKDYAI----TANKPITELVNRLIMETCQKGGGKVVIPAGKWKSGRIVLKSNVNLHLE 122
Query: 135 KGAVI 139
+GA I
Sbjct: 123 EGAEI 127
>gi|29349561|ref|NP_813064.1| exopolygalacturonase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341471|gb|AAO79258.1| Exopolygalacturonase precursor [Bacteroides thetaiotaomicron
VPI-5482]
Length = 432
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
SI D+GV + +T +K + GG + +P+G +L+GS +N L L++
Sbjct: 48 SITDYGVANDSTVVQT--KKIQEVIDLAARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 105
Query: 136 GAVILGSQEL 145
AV+ GS ++
Sbjct: 106 DAVLKGSDDI 115
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
RK SI +G DG T +T +AV + GG + VP G WLTG +L SN
Sbjct: 266 RKDTFSIVRYGAKSDGITLSTPAINQAVNLAH---EAGGGVVVVPSGFWLTGPIVLKSNV 322
Query: 130 TLFLQKGAVI 139
L + +GA++
Sbjct: 323 NLHISQGALL 332
>gi|146301964|ref|YP_001196555.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156382|gb|ABQ07236.1| Candidate beta glycuronase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 442
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 76 SIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I DFGV D T T +K + A GG + +P+G++L+G+ L++
Sbjct: 54 TITDFGVSKDSTKIQTTAIQKVIDKASA---NGGGVIVIPKGVFLSGALFFKPKTALYVS 110
Query: 135 KGAVILGSQEL 145
+G V+ GS +
Sbjct: 111 EGGVLKGSDNI 121
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 70 KRKVVMSIKDFGVGDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
K + V +K DG T T + V R QA GG L P G +LTG+ L SN
Sbjct: 21 KAERVDMLKSGAKADGKTLNTTLINHTVDRLSQA----GGGTLFFPAGTYLTGAIRLKSN 76
Query: 129 FTLFLQKGAVILGS 142
TL L+ GA +L S
Sbjct: 77 ITLELEAGATLLFS 90
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG + +P+G WLTG L SN L L+KGA +L S
Sbjct: 93 GGGIVVIPKGEWLTGKIHLKSNVNLHLEKGATLLFS 128
>gi|325970193|ref|YP_004246384.1| glycoside hydrolase family protein [Sphaerochaeta globus str.
Buddy]
gi|324025431|gb|ADY12190.1| glycoside hydrolase family 28 [Sphaerochaeta globus str. Buddy]
Length = 437
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 65 DQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQ---LNVPEGLWLT 120
D Y + + I+ FG +GDG T T + A+ D+ TQ + V +G++L+
Sbjct: 14 DVYTEGAVMELDIRAFGAIGDGRTLNTLAIQAAI-------DEAATQQAVVVVADGIYLS 66
Query: 121 GSFILTSNFTLFLQKGAVILGSQEL 145
G+ L L ++KGA +LGS L
Sbjct: 67 GALFLKQGMALEIRKGATLLGSPNL 91
>gi|356572058|ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
Length = 466
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 73 VVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V +S+ DFG GDG TE + A+ GD P G +LT + L S L
Sbjct: 30 VTLSVADFGAAGDGLRYDTEAIQSAINSCPE-GDPCHVTFPAP-GKYLTATVFLKSGVVL 87
Query: 132 FLQKGAVILGSQELK 146
++ GA ILG L+
Sbjct: 88 NVESGATILGGTRLE 102
>gi|342213860|ref|ZP_08706579.1| fibronectin type III domain protein [Veillonella sp. oral taxon 780
str. F0422]
gi|341597448|gb|EGS40007.1| fibronectin type III domain protein [Veillonella sp. oral taxon 780
str. F0422]
Length = 482
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
LPK + + VGDG T T +KA+R A G L++ +G++ TG+ L S
Sbjct: 137 LPKEPRLEATAYGAVGDGITDNTLALQKAIRDTPA-----GGILHLSKGVYRTGTLFLHS 191
Query: 128 NFTLFLQKGAVILG 141
TL L + AV++
Sbjct: 192 YMTLELDEDAVLMA 205
>gi|440475412|gb|ELQ44088.1| hypothetical protein OOU_Y34scaffold00101g5 [Magnaporthe oryzae
Y34]
gi|440489547|gb|ELQ69190.1| hypothetical protein OOW_P131scaffold00182g12 [Magnaporthe oryzae
P131]
Length = 715
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 69 PKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
P+ + ++ D+ D S + A+ A G + G+ + VP GL+LTG+ +L S
Sbjct: 334 PRGNGIYNVLDYKADDTGASLNTGIQSAL---DAAGARPGSIVYVPPGLYLTGNLVLPSR 390
Query: 129 FTLFLQKGAVI 139
+L+L GAV+
Sbjct: 391 TSLYLAGGAVL 401
>gi|332665086|ref|YP_004447874.1| glycoside hydrolase [Haliscomenobacter hydrossis DSM 1100]
gi|332333900|gb|AEE51001.1| glycoside hydrolase family 28 [Haliscomenobacter hydrossis DSM
1100]
Length = 532
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 69 PKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
P + I FG + DG T+ +KA+ V GG ++ +P G +++G+ L +
Sbjct: 23 PPPSKSLKITSFGAIADGITNNVVAIQKAIDKVS---KSGGGKVIIPPGNFMSGTVFLKT 79
Query: 128 NFTLFLQKGAVILG 141
TL L+ GA +LG
Sbjct: 80 GVTLHLELGARLLG 93
>gi|325285350|ref|YP_004261140.1| glycoside hydrolase family protein [Cellulophaga lytica DSM 7489]
gi|324320804|gb|ADY28269.1| glycoside hydrolase family 28 [Cellulophaga lytica DSM 7489]
Length = 460
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG-LWLTGSFILTSNFTLFL 133
+I D+G +G T T+ +K + +GG ++ +P G L G+ L N TL+L
Sbjct: 22 NIMDYGAKANGKTLDTKAVQKTIDLCS---KQGGGKVVIPAGKTVLIGTIYLKDNVTLYL 78
Query: 134 QKGAVILGSQELK 146
+ G+++LGS + K
Sbjct: 79 ENGSILLGSPDYK 91
>gi|265752319|ref|ZP_06088112.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|423228993|ref|ZP_17215398.1| hypothetical protein HMPREF1063_01218 [Bacteroides dorei
CL02T00C15]
gi|423239834|ref|ZP_17220949.1| hypothetical protein HMPREF1065_01572 [Bacteroides dorei
CL03T12C01]
gi|423244832|ref|ZP_17225906.1| hypothetical protein HMPREF1064_02112 [Bacteroides dorei
CL02T12C06]
gi|263237111|gb|EEZ22581.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392634746|gb|EIY28658.1| hypothetical protein HMPREF1063_01218 [Bacteroides dorei
CL02T00C15]
gi|392641219|gb|EIY35003.1| hypothetical protein HMPREF1064_02112 [Bacteroides dorei
CL02T12C06]
gi|392645459|gb|EIY39186.1| hypothetical protein HMPREF1065_01572 [Bacteroides dorei
CL03T12C01]
Length = 475
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT T +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGAQIVGA 86
>gi|345512457|ref|ZP_08791983.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229438032|gb|EEO48109.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 475
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT T +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGAQIVGA 86
>gi|212690875|ref|ZP_03299003.1| hypothetical protein BACDOR_00363 [Bacteroides dorei DSM 17855]
gi|237712637|ref|ZP_04543118.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|212666557|gb|EEB27129.1| hypothetical protein BACDOR_00363 [Bacteroides dorei DSM 17855]
gi|229453958|gb|EEO59679.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 475
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT T +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGAQIVGA 86
>gi|402841353|ref|ZP_10889804.1| exo-poly-alpha-D-galacturonosidase [Klebsiella sp. OBRC7]
gi|402283174|gb|EJU31695.1| exo-poly-alpha-D-galacturonosidase [Klebsiella sp. OBRC7]
Length = 658
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ FG GDGTT T+ ++A+ G ++ + G + TG+ L S+ TL
Sbjct: 163 IIEASTFGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVLISGGEFKTGALFLHSDMTLE 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|423101730|ref|ZP_17089432.1| hypothetical protein HMPREF9686_00336 [Klebsiella oxytoca 10-5242]
gi|376390556|gb|EHT03239.1| hypothetical protein HMPREF9686_00336 [Klebsiella oxytoca 10-5242]
Length = 658
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ FG GDGTT T+ ++A+ G ++ + G + TG+ L S+ TL
Sbjct: 163 IIEASTFGAKGDGTTLNTQALQQAIDSCTVAHYPQGCKVLISGGEFKTGALFLHSDMTLE 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|333380567|ref|ZP_08472258.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
gi|332826562|gb|EGJ99391.1| hypothetical protein HMPREF9455_00424 [Dysgonomonas gadei ATCC
BAA-286]
Length = 504
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ +I D+G DG T TT ++A+ +GG ++VP G +L G+ L SN
Sbjct: 22 IYNIIDYGAKNDGVTLTTAQIQEAINECH---KEGGGIVHVPSGTYLVGTINLKSNVEFN 78
Query: 133 LQKGAVILGSQEL 145
+ GA++ + +L
Sbjct: 79 FETGAILKATTDL 91
>gi|319643140|ref|ZP_07997770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520568|ref|ZP_08799955.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835088|gb|EET15397.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385218|gb|EFV66167.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 474
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT T +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGARIVGA 86
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 50 GALFNPATCVAGLPGDQY--------LPKRKVVMSI---KDFGVGD------GTTSTTEV 92
G F T GD Y P + + + I KDF + D G T+
Sbjct: 11 GICFGLLTVSLAFAGDNYKTVKVKAPFPMQPIKIFIYPDKDFPITDYGAQPGGEADNTKA 70
Query: 93 FRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
A+ +A GG ++ VP G WLTG SN L L++ AV+
Sbjct: 71 IAAAI---EACNQAGGGRVVVPAGTWLTGPIHFKSNVNLCLEENAVL 114
>gi|423127885|ref|ZP_17115564.1| hypothetical protein HMPREF9694_04576 [Klebsiella oxytoca 10-5250]
gi|376394924|gb|EHT07574.1| hypothetical protein HMPREF9694_04576 [Klebsiella oxytoca 10-5250]
Length = 658
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
++ FG GDGTT T+ ++A+ G ++ + G + TG+ L S+ TL
Sbjct: 163 IIEASTFGAKGDGTTLNTQALQQAIDSCTVTHYPQGCKVLISGGEFKTGALFLHSDMTLE 222
Query: 133 LQKGAVILGSQE 144
+ GA +LGS +
Sbjct: 223 IAAGATLLGSDD 234
>gi|345516873|ref|ZP_08796358.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423228584|ref|ZP_17214990.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|423239702|ref|ZP_17220818.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
gi|423243850|ref|ZP_17224926.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|345455412|gb|EEO47835.2| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|392635892|gb|EIY29784.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|392643888|gb|EIY37635.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|392645742|gb|EIY39465.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
Length = 445
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 61 GLPGDQYLPKRKVV--------MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQL 111
G P ++ + KVV + D+G+ + T+ +K + A GG +
Sbjct: 32 GTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKIIDEAAA---NGGGVI 88
Query: 112 NVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
+PEG++ +GS L+L KGA +LGS+ +
Sbjct: 89 YIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENI 122
>gi|212693937|ref|ZP_03302065.1| hypothetical protein BACDOR_03461 [Bacteroides dorei DSM 17855]
gi|212663469|gb|EEB24043.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 453
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 61 GLPGDQYLPKRKVV--------MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQL 111
G P ++ + KVV + D+G+ + T+ +K + A GG +
Sbjct: 40 GTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKIIDEAAA---NGGGVI 96
Query: 112 NVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
+PEG++ +GS L+L KGA +LGS+ +
Sbjct: 97 YIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENI 130
>gi|398384078|ref|ZP_10542132.1| endopolygalacturonase [Sphingobium sp. AP49]
gi|397723586|gb|EJK84079.1| endopolygalacturonase [Sphingobium sp. AP49]
Length = 511
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 38 LSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKA 96
+S R + A GAL P T P + +R ++D G GDG ++ A
Sbjct: 1 MSRREISLGLAVGALLAPGT---AFPFAGHATRR---FDVRDHGARGDGMAIDSDAINAA 54
Query: 97 VRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
+ G GGT L +P G +L+ S L S+ TL + GAVI
Sbjct: 55 ILAASQAG--GGTVL-LPRGRYLSFSIRLKSHVTLVIGDGAVI 94
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 77 IKDFGVGDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I DFG T+ +KA+ R + +GG ++ VP G WLTG+ L S L +++
Sbjct: 47 ITDFGASVRATAARN--QKAINRAIATCSRQGGGRVVVPRGEWLTGAIRLQSRVNLVVEE 104
Query: 136 GAVI 139
GA +
Sbjct: 105 GATL 108
>gi|448581455|ref|ZP_21645326.1| polygalacturonase [Haloferax gibbonsii ATCC 33959]
gi|445733703|gb|ELZ85269.1| polygalacturonase [Haloferax gibbonsii ATCC 33959]
Length = 529
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
TE F+ A+ + GG + VP G + G+ L SN TL+L+ GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSNVTLYLEAGAVV 59
>gi|448567354|ref|ZP_21637442.1| polygalacturonase [Haloferax prahovense DSM 18310]
gi|445712249|gb|ELZ64032.1| polygalacturonase [Haloferax prahovense DSM 18310]
Length = 529
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
TE F+ A+ + GG + VP G + G+ L SN TL+L+ GAV+
Sbjct: 13 TEAFQTAI---DDCSESGGGTVTVPSGTYTVGTVHLRSNVTLYLEAGAVV 59
>gi|29349554|ref|NP_813057.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341464|gb|AAO79251.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 467
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+ + +++DFG DG T + +A+ +A +GG + +P G + S L SN
Sbjct: 18 QAAIYNVRDFGAKADGKTIDSPAINRAI---EAAAQEGGGTVYLPAGEYACYSIRLKSNI 74
Query: 130 TLFLQKGAVILGS 142
L+L++GA I+ +
Sbjct: 75 HLYLEQGARIIAA 87
>gi|383120486|ref|ZP_09941214.1| hypothetical protein BSIG_2504 [Bacteroides sp. 1_1_6]
gi|251840461|gb|EES68543.1| hypothetical protein BSIG_2504 [Bacteroides sp. 1_1_6]
Length = 467
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+ + +++DFG DG T + +A+ +A +GG + +P G + S L SN
Sbjct: 18 QAAIYNVRDFGAKADGKTIDSPAINRAI---EAAAQEGGGTVYLPAGEYACYSIRLKSNI 74
Query: 130 TLFLQKGAVILGS 142
L+L++GA I+ +
Sbjct: 75 HLYLEQGARIIAA 87
>gi|403059374|ref|YP_006647591.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402806700|gb|AFR04338.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 659
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG T+ T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGLTNDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I +FG VGD T T+ ++A+ + GG + VP G +L+G+ L + TL +Q
Sbjct: 56 ITNFGAVGDKVTLNTKAIQRAI---DSCATSGGGLVVVPAGNFLSGTIHLKTGVTLHVQS 112
Query: 136 GAVILGS 142
G + GS
Sbjct: 113 GGTLFGS 119
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 111 LNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
L +P G +LTGS L S TL L+ GA +LGSQ L
Sbjct: 36 LVIPAGRFLTGSLFLKSGMTLHLEAGAQLLGSQSLD 71
>gi|380693880|ref|ZP_09858739.1| exopolygalacturonase [Bacteroides faecis MAJ27]
Length = 432
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI +GV D T T +K + GG + VP+G +L+GS +N L+L+
Sbjct: 48 SITSYGVVNDSTVVQT---KKIQEVIDLAAQNGGGVIVVPQGTFLSGSLFFKNNTHLYLE 104
Query: 135 KGAVILGSQEL 145
+ AV+ GS ++
Sbjct: 105 ENAVLKGSDDI 115
>gi|294777278|ref|ZP_06742733.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294448898|gb|EFG17443.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 474
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT T +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDTPAINRAI---EEAASQGGGTVYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGARIVGA 86
>gi|255533000|ref|YP_003093372.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345984|gb|ACU05310.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 524
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILG 141
GDG T T +K++ A GG ++ P G +++ + +L SN TL+L G + G
Sbjct: 37 GDGLTVNTTAIQKSI---DACAASGGGKVIFPAGHFMSATVVLKSNVTLYLSDGCTLTG 92
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI FG ++ +KA+ R + KGG ++ VP G WLTG+ + S+ L ++
Sbjct: 45 SITQFGASPKASAAKN--QKAINRAILMCSKKGGGRIVVPRGEWLTGAIRMQSHVNLVVE 102
Query: 135 KGAVI 139
+GA +
Sbjct: 103 EGATL 107
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
TE +KA+ A GG + VP G +LTG+ L SN L L GAV+ S + K
Sbjct: 16 TEAIQKAI---DAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPK 69
>gi|391230412|ref|ZP_10266618.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391220073|gb|EIP98493.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 481
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 69 PKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
P K +M I G + + R + + D GG + P G +LTG+ L +N
Sbjct: 10 PHNKPIMRISITETGAIASPSAINTRAIQQAIDRCADAGGGVVYFPPGTFLTGTLWLKTN 69
Query: 129 FTLFLQKGAVILGSQE 144
TL+L+ G +L E
Sbjct: 70 TTLYLEAGCTLLACPE 85
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 78 KDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
+DFG DG T T ++A+ +GG + + G WL+G L SN TL + +G
Sbjct: 378 EDFGGKADGKTLNTTAIQQAI---DQCSQRGGGTVQLSPGRWLSGPLQLQSNITLQIDQG 434
Query: 137 AVILGSQE 144
A + S +
Sbjct: 435 ATLQASNQ 442
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQE 144
G S TE+ R ++ +GG + P G +LT + + SN TL+L+ GAV+ S +
Sbjct: 33 GIKSCTELIN---RTIEKAASEGGGTIYFPVGTYLTATIHMKSNITLYLESGAVLRFSDK 89
Query: 145 LK 146
+
Sbjct: 90 FE 91
>gi|336426338|ref|ZP_08606348.1| hypothetical protein HMPREF0994_02354 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010773|gb|EGN40753.1| hypothetical protein HMPREF0994_02354 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 437
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 80 FGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G + T T E+ +KAV + G GGT + +P G++L+G+ L N +L+L++GAV+
Sbjct: 1 MGARENTLCTKEI-QKAVDLIDEAG--GGTVI-IPSGVYLSGTIHL-KNTSLYLERGAVL 55
Query: 140 LGSQELK 146
GS +
Sbjct: 56 KGSSNIN 62
>gi|402494827|ref|ZP_10841563.1| glycoside hydrolase family protein [Aquimarina agarilytica ZC1]
Length = 460
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 71 RKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+K I+DFG D T T +KA+ A +GG ++ V G ++TG+ +L +N
Sbjct: 21 KKKTFDIRDFGAQADTLTVNTIAIQKAI---NACHKQGGGKVVVSNGTYITGTVLLKNNV 77
Query: 130 TLFLQKGAVILGS 142
L + + V+ GS
Sbjct: 78 HLVIHENGVLKGS 90
>gi|392950351|ref|ZP_10315908.1| glycoside hydrolase, family 28 [Lactobacillus pentosus KCA1]
gi|392434633|gb|EIW12600.1| glycoside hydrolase, family 28 [Lactobacillus pentosus KCA1]
Length = 402
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 71 RKVVMSIKDFGVGDGTTST-TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+ S+ D+G + T+ F+ A+ A D G + VP G + GS L SN
Sbjct: 3 ERATFSVTDYGAETQSEHVQTDQFQAAL---NACRDNNGGTVVVPAGQFQIGSIRLYSNT 59
Query: 130 TLFLQKGAVILGSQEL 145
L L+ GAVI GS+ L
Sbjct: 60 RLLLKSGAVIKGSENL 75
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G++LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGIYLTGSIHLKSNITLELEAGATLLFS 89
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V ++ FG +GDG + + A+ VQ GG + +P G +L F +TS+ L+
Sbjct: 73 VFNLTAFGAIGDGRHNNSLAMAAALEAVQ---QSGGGTIYIPPGDFLLAPFNMTSHLVLY 129
Query: 133 LQKGAVILGSQEL 145
L+ G+++ + L
Sbjct: 130 LEAGSILRATDRL 142
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 71 RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNF 129
+K +SI FG + G TE +A+ KGG + +P G+WL+G L SN
Sbjct: 33 KKDTVSITAFGAISGGRHLNTESINQAIDQTH---KKGGGVVLIPAGVWLSGPITLKSNI 89
Query: 130 TLFLQKGAVI 139
L L A++
Sbjct: 90 NLHLAANALL 99
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 68 LPK-RKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
LPK + ++ D+G V DG+ TE +A++ A GG ++ +P G ++TG L
Sbjct: 47 LPKFKNQEFNVMDYGAVADGSVLNTEAIAEAIKACNA---AGGGKVVLPAGKYVTGPIHL 103
Query: 126 TSNFTLFLQKGAVIL 140
N L + +GA +L
Sbjct: 104 LDNVNLEIAEGAEVL 118
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 69 PKRKVVMSIKDFGVG---DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
PKR V DF V G T + R + +GG + +PEG W + +L
Sbjct: 440 PKRPV---FPDFIVNMKNKGMTEDAPITDLVNRTIAEVSKQGGGTVVIPEGKWKSARIVL 496
Query: 126 TSNFTLFLQKGAVI 139
SN L L KGA I
Sbjct: 497 KSNVNLHLAKGAEI 510
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQ 143
DG T+ ++A+ A + GG +++ G WL+G L ++ TL L +G+ +LGS
Sbjct: 22 DGRTNDGPAIQRAI---TACSEAGGGMVSLTSGTWLSGPLSLKNHVTLNLGQGSTLLGSS 78
Query: 144 ELK 146
+ +
Sbjct: 79 DTR 81
>gi|373958218|ref|ZP_09618178.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373894818|gb|EHQ30715.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 510
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++K +G GDG T+ KA+ A G GGT + P G +L+ + L SN LFL
Sbjct: 31 NVKAYGAKGDGENLDTKAIDKAIETAAAAG--GGT-VYFPAGNYLSVTIHLKSNVGLFLD 87
Query: 135 KGAVILGSQE 144
+G+ ++ S++
Sbjct: 88 QGSTLIASEK 97
>gi|312960267|ref|ZP_07774778.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
gi|311285489|gb|EFQ64059.1| glycoside hydrolase, family [Pseudomonas fluorescens WH6]
Length = 599
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 63 PGDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
P Q K V +K +G GDG T + A+ G ++ +P+G + +G
Sbjct: 139 PVMQRTTKVAAVFDVKRYGAKGDGIHLDTLAIQTAIDACTP-----GCKVLLPKGTYKSG 193
Query: 122 SFILTSNFTLFLQKGAVILGSQ 143
+ L SN TL + +GA +LGS+
Sbjct: 194 ALYLKSNMTLEVAEGATLLGSE 215
>gi|431796697|ref|YP_007223601.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787462|gb|AGA77591.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 539
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 73 VVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++I++ G +G +T V ++A+ A +GG ++ VP G W TG L SN
Sbjct: 73 LTINIREKGAKEGELAT-RVIQEAIDEASA---QGGGKVVVPAGKWKTGRISLKSNVNFH 128
Query: 133 LQKGAVILGSQELK 146
L++GA + S +L+
Sbjct: 129 LEEGAELYFSGQLE 142
>gi|397689076|ref|YP_006526330.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395810568|gb|AFN73317.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 469
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 80 FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGL-WLTGSFILTSNFTLFLQKGA 137
FG GDG T T+ + A+ A G G ++ +PEG +LTG+ +L S F+ +GA
Sbjct: 43 FGAAGDGKTLDTKAIQNAIDKAHAEG--GNAKVIIPEGYKFLTGTIVLKSGVEFFIDQGA 100
Query: 138 VILGS 142
++ S
Sbjct: 101 ELIIS 105
>gi|298383809|ref|ZP_06993370.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 1_1_14]
gi|298263413|gb|EFI06276.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 1_1_14]
Length = 433
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
SI D+GV + +T +K + GG + +P+G +L+GS +N L L++
Sbjct: 49 SITDYGVANDSTVVQT--KKIQGVIDLAARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 106
Query: 136 GAVILGSQEL 145
AV+ GS ++
Sbjct: 107 DAVLKGSDDI 116
>gi|345519936|ref|ZP_08799343.1| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|345457031|gb|EET16505.2| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
Length = 389
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ D+GV D T TE + A+ A GG + +P+G +L+G+ L L++
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
DG T T++ + + A GG L P G +LTGS + S+ TL L+ GA +L S
Sbjct: 36 DGKTLNTKLINSTIDRLNA---NGGGTLFFPAGTYLTGSIRMKSHITLELEAGATLLFS 91
>gi|258546300|ref|ZP_05706534.1| conserved hypothetical protein, partial [Cardiobacterium hominis
ATCC 15826]
gi|258518471|gb|EEV87330.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 1028
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 66 QYLPK--RKVVMSIKD--FGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWL- 119
+Y+PK + ++KD +G GDG T T +KA+ A +KGG +++P G +L
Sbjct: 148 EYVPKPTTDFIANVKDAEYGAKGDGQTDDTAAIQKAI---DAVAEKGGGIVDIPNGTYLI 204
Query: 120 -----------TGSFILTSNFTLFLQKGAVI 139
T +L SN L + G V+
Sbjct: 205 DAMRQETSSYETSGLVLKSNVILRMADGTVL 235
>gi|383120494|ref|ZP_09941222.1| hypothetical protein BSIG_2498 [Bacteroides sp. 1_1_6]
gi|382985013|gb|EES68537.2| hypothetical protein BSIG_2498 [Bacteroides sp. 1_1_6]
Length = 432
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 76 SIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
SI D+GV + +T +K + GG + +P+G +L+GS +N L L++
Sbjct: 48 SITDYGVANDSTVVQT--KKIQGVIDLAARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEE 105
Query: 136 GAVILGSQEL 145
AV+ GS ++
Sbjct: 106 DAVLKGSDDI 115
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 70 KRKVVMSIKDF-GVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
KRK+ ++ + +GDG T T +KA+ + + P+G +LTG+ + SN
Sbjct: 93 KRKIDVTTSPYNALGDGKTLNTAALQKALDDCDE-----NSIVFFPKGTYLTGALNVHSN 147
Query: 129 FTLFLQKGAVILGSQE 144
++L++GA++ G+++
Sbjct: 148 SEIYLEEGALLQGTED 163
>gi|383644708|ref|ZP_09957114.1| polygalacturonase [Sphingomonas elodea ATCC 31461]
Length = 508
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V+ ++ FG GDG + +A+ + A +GG + +P G + + S L S+ TL
Sbjct: 17 VVDVRAFGARGDGKALDSPAINRAIEHAAA---RGGGTVWLPAGTYRSYSIRLKSHITLH 73
Query: 133 LQKGAVILGS 142
L GAV+L +
Sbjct: 74 LDSGAVLLAA 83
>gi|294776867|ref|ZP_06742330.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449343|gb|EFG17880.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 434
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ D+GV D T TE + A+ A GG + +P+G +L+G+ L L++
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPQTHLHLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
+GG + VP G+W TG IL SN L L +GA
Sbjct: 73 RGGGTVVVPPGVWRTGRLILKSNVNLHLSEGA 104
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
+GG + VP G+W TG IL SN L L +GA
Sbjct: 73 RGGGTVVVPPGVWRTGRLILKSNVNLHLSEGA 104
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 106 KGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
+GG + VP G+W TG IL SN L L +GA
Sbjct: 73 RGGGTVVVPPGVWRTGRLILKSNVNLHLSEGA 104
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 75 MSIKDFGVGDGTTST-TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+SI DFG G T +A++ A GG ++ +P G W+TG+ + SN L+L
Sbjct: 26 VSIIDFGAQCGPDHVNTMAINQAIK---AVSQHGGGKVIIPAGYWMTGAIEMQSNVNLYL 82
Query: 134 QKGAVI 139
A +
Sbjct: 83 DYNAFV 88
>gi|380693873|ref|ZP_09858732.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 473
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+++DFG DG T + +A+ +A GG + +P G + S L SN L+L+
Sbjct: 29 NVRDFGAKADGKTIDSPAINRAI---EAAAQDGGGTIYLPAGEYACYSIRLKSNIHLYLE 85
Query: 135 KGAVILGS 142
+GA I+ +
Sbjct: 86 QGARIIAA 93
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I D+G V DGTT T ++A + GG + VP G +LTG+ L SN L +
Sbjct: 5 NIVDYGAVQDGTTLATG---AIASAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHVS 61
Query: 135 KGAVILGSQEL 145
GA + S EL
Sbjct: 62 PGATLSFSTEL 72
>gi|332880283|ref|ZP_08447961.1| peptidase C10 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357047517|ref|ZP_09109122.1| peptidase C10 family protein [Paraprevotella clara YIT 11840]
gi|332681728|gb|EGJ54647.1| peptidase C10 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355529588|gb|EHG99015.1| peptidase C10 family protein [Paraprevotella clara YIT 11840]
Length = 1146
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 82 VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
+GDGTTS T V RK V+A+G +G L PEG LT S
Sbjct: 1069 LGDGTTSVTPV-RKGTATVKAYGGEGCISLQGPEGQVLTVS 1108
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G S TE+ + + + +GG + P G++LT + + SN TL+++ GAV+
Sbjct: 33 GIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITLYVESGAVL 84
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G S TE+ + + + +GG + P G++LT + + SN TL+++ GAV+
Sbjct: 33 GIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITLYVESGAVL 84
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G S TE+ + + + +GG + P G++LT + + SN TL+++ GAV+
Sbjct: 33 GIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIHMKSNITLYVESGAVL 84
>gi|300770109|ref|ZP_07079988.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762585|gb|EFK59402.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 649
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I +FG VGD T T ++A+ A GG + VP G +L+G+ L + TL +Q
Sbjct: 57 ITNFGAVGDKVTLNTAAIQRAIDSCAA---SGGGLVVVPAGDFLSGTVHLKTGVTLHVQS 113
Query: 136 GAVILGS 142
G + GS
Sbjct: 114 GGTLWGS 120
>gi|212693803|ref|ZP_03301931.1| hypothetical protein BACDOR_03324 [Bacteroides dorei DSM 17855]
gi|237709331|ref|ZP_04539812.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755006|ref|ZP_06089920.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513257|ref|ZP_08792779.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423232694|ref|ZP_17219094.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|423242177|ref|ZP_17223287.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
gi|423247386|ref|ZP_17228436.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|212663692|gb|EEB24266.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229437124|gb|EEO47201.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229456716|gb|EEO62437.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234617|gb|EEZ20196.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392623133|gb|EIY17238.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|392632526|gb|EIY26485.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|392639921|gb|EIY33729.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ D+GV D T TE + A+ A GG + +P+G +L+G+ L L++
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|319644255|ref|ZP_07998768.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|423312681|ref|ZP_17290618.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
gi|317384246|gb|EFV65218.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392687415|gb|EIY80708.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ D+GV D T TE + A+ A GG + +P+G +L+G+ L L++
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|311744989|ref|ZP_07718774.1| galacturan 1,4-alpha-galacturonidase [Algoriphagus sp. PR1]
gi|311302317|gb|EAZ81716.2| galacturan 1,4-alpha-galacturonidase [Algoriphagus sp. PR1]
Length = 444
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 88 STTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
ST +K R + KGG + +P+G +L+G+ N L+L++G+V+ GS ++
Sbjct: 66 STLLQTQKIQRIIDEASLKGGGVIIIPKGTFLSGALFFKPNTHLYLEEGSVLKGSDDI 123
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 48 AEGALFNPATCVAGL-PGDQY------------LPKRKVVMSIKDFGVGDGTTSTTEVFR 94
AEGA+ N V L PG Y + ++ I+DFG ++ +
Sbjct: 46 AEGAIRNVVFTVTSLEPGATYHLHGGSARLEFTTRQETALLDIRDFGASPEASNNAPAIQ 105
Query: 95 KAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
+ + A GGT L +P G WL+G L S+ L ++ G
Sbjct: 106 RTI----AALPPGGT-LRIPAGRWLSGPIFLKSHMALLVEDGG 143
>gi|448551815|ref|ZP_21629549.1| polygalacturonase [Haloferax sp. ATCC BAA-645]
gi|445710205|gb|ELZ62027.1| polygalacturonase [Haloferax sp. ATCC BAA-645]
Length = 544
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
TE F+ A+ A G GGT + VP G + G+ L S+ TL+L+ GAV+
Sbjct: 22 TEAFQTAIDDCSASG--GGT-VTVPSGTYTVGTVHLRSDVTLYLEAGAVV 68
>gi|448540217|ref|ZP_21623454.1| polygalacturonase [Haloferax sp. ATCC BAA-646]
gi|448554079|ref|ZP_21630869.1| polygalacturonase [Haloferax sp. ATCC BAA-644]
gi|445710091|gb|ELZ61914.1| polygalacturonase [Haloferax sp. ATCC BAA-646]
gi|445719264|gb|ELZ70946.1| polygalacturonase [Haloferax sp. ATCC BAA-644]
Length = 535
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
TE F+ A+ A G GGT + VP G + G+ L S+ TL+L+ GAV+
Sbjct: 13 TEAFQTAIDDCSASG--GGT-VTVPSGTYTVGTVHLRSDVTLYLEAGAVV 59
>gi|333901344|ref|YP_004475217.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
gi|333116609|gb|AEF23123.1| Exo-poly-alpha-galacturonosidase [Pseudomonas fulva 12-X]
Length = 608
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T +K + ++ +P G++ TG+ L SN TL + +GA +LGS
Sbjct: 168 GDGKTLNTAAIQKTIDACSL-----NCKVLIPAGVFKTGALYLKSNMTLEIAEGATLLGS 222
Query: 143 Q 143
+
Sbjct: 223 E 223
>gi|150004321|ref|YP_001299065.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932745|gb|ABR39443.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
+ D+GV D T TE + A+ A GG + +P+G +L+G+ L L++
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAI---DAAAQNGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI DFG V STT + + + A D GG ++ +P G W +G L SN L L
Sbjct: 61 SITDFGAVEKEKISTT---KAISQAIAAASDAGGGRVIIPAGEWFSGKIHLKSNVNLHLS 117
Query: 135 KGAVI 139
+GA++
Sbjct: 118 EGAIL 122
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++KD G+ + T V R + +GG + +PEG W + +L SN L L
Sbjct: 124 IVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHL 179
Query: 134 QKGAVI 139
KGA I
Sbjct: 180 AKGAEI 185
>gi|423315474|ref|ZP_17293402.1| hypothetical protein HMPREF1058_04014 [Bacteroides vulgatus
CL09T03C04]
gi|392679277|gb|EIY72663.1| hypothetical protein HMPREF1058_04014 [Bacteroides vulgatus
CL09T03C04]
Length = 474
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT + +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDSPAINRAI---EEAASQGGGTIYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGARIVGA 86
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
TE F+KA+ A G GGT ++VP G +L L SN L L K A I+ S E+
Sbjct: 54 TEAFQKAIDDCAAAG--GGT-VHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEI 106
>gi|237710404|ref|ZP_04540885.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229455866|gb|EEO61587.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 437
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 61 GLPGDQYLPKRKVVMSI---KDFGVGD-GTTSTTEVFR--KAVRYVQAFGDKGGTQLNVP 114
G P ++ + KVV K + + D G S + + K + + GG + +P
Sbjct: 32 GTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKIIDEAAANGGGVIYIP 91
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
EG++ +GS L+L KGA +LGS+ +
Sbjct: 92 EGIYKSGSLFFKQGTHLYLSKGATLLGSENI 122
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 68 LPKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTS 127
+ +K ++ DF D T + +KA+ G K + + +PEG++L G+ L
Sbjct: 1 MQTKKEFINALDFKTNDIQQDDTVMLQKAINQ----GAKEHSPVFIPEGIYLVGALFLKD 56
Query: 128 NFTLFLQKGAVILGSQELK 146
L ++GAV+ G E++
Sbjct: 57 KSHLIFEEGAVLKGKTEIE 75
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++KD G+ + T V R + +GG + +PEG W + +L SN L L
Sbjct: 124 IVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHL 179
Query: 134 QKGAVI 139
KGA I
Sbjct: 180 AKGAEI 185
>gi|265751211|ref|ZP_06087274.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263238107|gb|EEZ23557.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 435
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 61 GLPGDQYLPKRKVVMSI---KDFGVGD-GTTSTTEVFR--KAVRYVQAFGDKGGTQLNVP 114
G P ++ + KVV K + + D G S + + K + + GG + +P
Sbjct: 22 GTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKIIDEAAANGGGVIYIP 81
Query: 115 EGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
EG++ +GS L+L KGA +LGS+ +
Sbjct: 82 EGIYKSGSLFFKQGTHLYLSKGATLLGSENI 112
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 72 KVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
K ++IK G G+ T E+ + + A KGG + +P G W +G L SN L
Sbjct: 58 KYTITIK----GQGSAQTKEIQQA----IDAVSKKGGGTVIIPAGNWHSGRIALKSNVNL 109
Query: 132 FLQKGAVILGSQELK 146
L++ AV+ E++
Sbjct: 110 HLEENAVLEFGGEIR 124
>gi|167761858|ref|ZP_02433985.1| hypothetical protein BACSTE_00201 [Bacteroides stercoris ATCC
43183]
gi|167700228|gb|EDS16807.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 432
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 76 SIKDFGVG-DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I D+GV D T TE K + + GG + +P+G +L+GS L+++
Sbjct: 48 TITDYGVANDSTILQTE---KIQAVIDRAAENGGGVIIIPKGTFLSGSIFFKPKTHLYME 104
Query: 135 KGAVILGSQEL 145
+GAV+ GS ++
Sbjct: 105 EGAVLKGSDDI 115
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
TE +KA+ A G GGT L VP+G +LT L SN L L+K A ++ S E+
Sbjct: 54 TEAIQKAIDDCAAAG--GGTVL-VPKGNFLTNPLFLKSNIQLKLEKDATLVASTEV 106
>gi|389647697|ref|XP_003721480.1| hypothetical protein MGG_09608 [Magnaporthe oryzae 70-15]
gi|86195991|gb|EAQ70629.1| hypothetical protein MGCH7_ch7g36 [Magnaporthe oryzae 70-15]
gi|351638872|gb|EHA46737.1| hypothetical protein MGG_09608 [Magnaporthe oryzae 70-15]
Length = 715
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 69 PKRKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSN 128
P+ + ++ D D S + A+ A G + G+ + VP GL+LTG+ +L S
Sbjct: 334 PRGNGIYNVLDHKADDTGASLNTGIQSAL---DAAGARPGSIVYVPPGLYLTGNLVLPSR 390
Query: 129 FTLFLQKGAVI 139
+L+L GAV+
Sbjct: 391 TSLYLAGGAVL 401
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 74 VMSIKDFGVGDGTTSTT--EVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
V +I DFG T E +A+ A +GG + VPEG + TG L SN L
Sbjct: 47 VYNIMDFGAKPDTPDAPCHEAINQAI---MACNQEGGGTVLVPEGTFYTGPITLKSNVNL 103
Query: 132 FLQKGAVI 139
+ +GAV+
Sbjct: 104 HVSEGAVL 111
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++KD G+ + T V R + +GG + +PEG W + +L SN L L
Sbjct: 27 IVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHL 82
Query: 134 QKGAVI 139
KGA I
Sbjct: 83 AKGAEI 88
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
S DFG GD +T T ++A+ R Q +GG + + G+WL+G +L SN TL +
Sbjct: 28 SPADFGGKGDDSTLATRAIQQAIDRCAQ----QGGGHVTLGPGVWLSGPIVLKSNVTLVI 83
Query: 134 QKGAVI 139
G +
Sbjct: 84 PDGVTL 89
>gi|334123991|ref|ZP_08498000.1| BCCT family betaine/carnitine/choline transporter [Enterobacter
hormaechei ATCC 49162]
gi|333388990|gb|EGK60156.1| BCCT family betaine/carnitine/choline transporter [Enterobacter
hormaechei ATCC 49162]
Length = 665
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 18 LVPIVTLIKILSLQITKKPVLSLRRVGFSGAEGALFNPATCVAGLPGDQYLPKRKVVMSI 77
L+ I L+K L +TK+ LS+ + + A NP L YLPKR +V
Sbjct: 491 LISIYGLLKALRRDLTKRESLSMANIAPTAAR----NPIPWQRRLRNIAYLPKRSLVKRF 546
Query: 78 KDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEG 116
D EV R+A+ VQ +K GTQ ++ +
Sbjct: 547 MD-----------EVIRQAMVLVQEELNKQGTQSHISDA 574
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++KD G+ + T V R + +GG + +PEG W + +L SN L L
Sbjct: 59 IVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHL 114
Query: 134 QKGAVI 139
KGA I
Sbjct: 115 AKGAEI 120
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
TE F+KA+ A G GGT ++VP G +L L SN L L K A I+ S E+
Sbjct: 54 TEAFQKAIDDCAAAG--GGT-VHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEV 106
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
TE F+KA+ A G GGT ++VP G +L L SN L L K A I+ S E+
Sbjct: 54 TEAFQKAIDDCAAAG--GGT-VHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEV 106
>gi|150002792|ref|YP_001297536.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931216|gb|ABR37914.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 474
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DGTT + +A+ + +GG + P G + S L S+ L+
Sbjct: 20 IYNVKDYGAKADGTTIDSPAINRAI---EEAASQGGGTVYFPAGEYACYSIRLASHIHLY 76
Query: 133 LQKGAVILGS 142
+++GA I+G+
Sbjct: 77 IEQGARIVGA 86
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 90 TEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
TE F+KA+ A G GGT ++VP G +L L SN L L K A I+ S E+
Sbjct: 54 TEAFQKAIDDCAAAG--GGT-VHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEV 106
>gi|189467886|ref|ZP_03016671.1| hypothetical protein BACINT_04278 [Bacteroides intestinalis DSM
17393]
gi|189436150|gb|EDV05135.1| hypothetical protein BACINT_04278 [Bacteroides intestinalis DSM
17393]
Length = 457
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
+ ++KD+G DG T + +A+ A G+ GGT + +P G ++ S L S+ L+
Sbjct: 5 IHNVKDYGARADGVTIDSPAINRAIS--AAAGEGGGT-VYIPAGEYVCYSIRLASHVHLY 61
Query: 133 LQKGAVILGS 142
L++GA I+ +
Sbjct: 62 LEQGARIIAA 71
>gi|227114135|ref|ZP_03827791.1| exo-poly-alpha-D-galacturonosidase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 659
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG + T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGVANDTVAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGA 137
D + T+ +KA+ A GG + P G +LTG+ L SN T+F+ GA
Sbjct: 51 DSSKLATQAIKKAI---DAASKAGGGTVYFPAGKYLTGAIHLKSNITIFIDAGA 101
>gi|421080242|ref|ZP_15541176.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium wasabiae CFBP
3304]
gi|401705095|gb|EJS95284.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium wasabiae CFBP
3304]
Length = 659
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG + T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGVANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 85 GTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G S TE+ + + + +GG + P G++LT + + +N TL+++ GAV+
Sbjct: 33 GIESCTELINQTIEKASS---EGGGTIYFPAGVYLTATIYMKNNITLYVESGAVL 84
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|385870873|gb|AFI89393.1| Exo-poly-alpha-D-galacturonosidase [Pectobacterium sp. SCC3193]
Length = 659
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG + T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGVANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 57 TCVAGLPGDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPE 115
T +P D+++ +++FG V DG ++ +KA+ + ++ +GG + +
Sbjct: 51 TQAPSIPSDRFV--------VENFGAVSDGVFDCSDAIQKAIEHAES---QGGGTVVFTQ 99
Query: 116 GLWLTGSFILTSNFTLFLQKGAVI 139
G++LTG L S L L+K A +
Sbjct: 100 GVYLTGPIHLRSKIALHLEKDATL 123
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 78 KDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKG 136
+D G GDG T T +KAV A GG + +P G +L+G +L S+ TL L+ G
Sbjct: 33 RDTGARGDGHTLNTNALQKAVDQAAA---AGGGVVVIPPGDFLSGGLVLRSHVTLHLEAG 89
Query: 137 AVILGSQELK 146
A++ GS ++
Sbjct: 90 AILRGSPRVE 99
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
Y+ GG +L G++ TGS +L SN L LQ GAV+ S + K
Sbjct: 23 YIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 99 YVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQELK 146
Y+ GG +L G++ TGS +L SN L LQ GAV+ S + K
Sbjct: 23 YIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPK 70
>gi|423222160|ref|ZP_17208630.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392643384|gb|EIY37135.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 432
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D GV D T TE + + + KGG + +P+G +L+G+ L+L++
Sbjct: 49 ITDHGVVNDSTLLQTEKIQAVIDQASS---KGGGVIIIPKGTYLSGALFFKPKTHLYLEE 105
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 106 GAVLKGSDDI 115
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|227114087|ref|ZP_03827743.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 444
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SI+ + DG T T +F++A+ + A +GG L V G +L G +L SNF L L+
Sbjct: 4 SIQSYSPAADGITPDTAIFQQAIDRIAA---QGGGTLTVEPGRYLLGGLLLPSNFCLQLE 60
Query: 135 KGAVILGS 142
GAV++ S
Sbjct: 61 AGAVLIVS 68
>gi|224538847|ref|ZP_03679386.1| hypothetical protein BACCELL_03743, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224519522|gb|EEF88627.1| hypothetical protein BACCELL_03743 [Bacteroides cellulosilyticus
DSM 14838]
Length = 436
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D GV D T TE + + + KGG + +P+G +L+G+ L+L++
Sbjct: 53 ITDHGVVNDSTLLQTEKIQAVIDQASS---KGGGVIIIPKGTYLSGALFFKPKTHLYLEE 109
Query: 136 GAVILGSQEL 145
GAV+ GS ++
Sbjct: 110 GAVLKGSDDI 119
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 72 KVVMSIKDFGVGDGTTSTT-EVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFT 130
+VV I+++G +G + KA+ A G GGT L VP G + TG L SN
Sbjct: 57 EVVYDIREYGAEEGVVGGAGDAIAKAIEACNAGG--GGTVL-VPAGTYHTGPVHLLSNVN 113
Query: 131 LFLQKGAVILGSQELK 146
L + +GA + S E K
Sbjct: 114 LHVAEGATLKFSTEAK 129
>gi|449501892|ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
sativus]
Length = 463
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L +R S+ DFG +GDG T + A+ A + P G +LT + L
Sbjct: 27 LLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPA---PSRCYVTFPPGTYLTATIWLR 83
Query: 127 SNFTLFLQKGAVILGSQELK 146
S L +Q GA +L +++
Sbjct: 84 SGVVLDIQPGATVLAGTKME 103
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 83 GDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G T+++ +KA+ R + KGG + VP G W TG+ L S+ L +++GA +
Sbjct: 50 GAKTSASAAQNQKAINRAIAVASMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATL 107
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 83 GDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G T+++ +KA+ R + KGG + VP G W TG+ L S+ L +++GA +
Sbjct: 70 GAKTSASAAQNQKAINRAIAVASMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATL 127
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 83 GDGTTSTTEVFRKAV-RYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
G T+++ +KA+ R + KGG + VP G W TG+ L S+ L +++GA +
Sbjct: 40 GAKTSASAAQNQKAINRAIAVASMKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATL 97
>gi|218134203|ref|ZP_03463007.1| hypothetical protein BACPEC_02093 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991578|gb|EEC57584.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 427
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 65 DQYLPK-----RKVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWL 119
D ++PK R+ +++ D+G+ TE +K + D GG + VPEG +L
Sbjct: 31 DVHVPKLGELGRQYILT--DYGINADGNIHTEQLQKLI---DTAADNGGGVIVVPEGTYL 85
Query: 120 TGSFILTSNFTLFLQKGAVILGSQEL 145
TG+ L+++ ++ GS ++
Sbjct: 86 TGALFFRQGVNLYVKADGMLKGSDDI 111
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 63 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 98
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 54 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 89
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 64 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 99
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 107 GGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GG L P G +LTGS L SN TL L+ GA +L S
Sbjct: 63 GGGTLFFPAGTYLTGSIHLKSNITLELEAGATLLFS 98
>gi|449437609|ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
sativus]
Length = 463
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILT 126
L +R S+ DFG +GDG T + A+ A + P G +LT + L
Sbjct: 27 LLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPA---PSRCYVTFPPGTYLTATIWLR 83
Query: 127 SNFTLFLQKGAVILGSQELK 146
S L +Q GA +L +++
Sbjct: 84 SGVVLDIQPGATVLAGTKME 103
>gi|198277376|ref|ZP_03209907.1| hypothetical protein BACPLE_03588 [Bacteroides plebeius DSM 17135]
gi|198269874|gb|EDY94144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 428
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 61 GLPGDQYLPKRKVV--------MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQL 111
G P ++ + +VV I ++GV D T TE + + +A D GG +
Sbjct: 14 GTPIPEWFREHRVVPVKELGKQYCITNYGVQNDSTILQTERIQAVID--KAAQDGGGV-I 70
Query: 112 NVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
+P+G +L+GS L+L+KGA + GS ++
Sbjct: 71 CIPKGTFLSGSLFFRPRTHLYLEKGATLKGSDDI 104
>gi|402085436|gb|EJT80334.1| hypothetical protein GGTG_00335 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1634
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 69 PKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGD------KGGTQLNVPEGLWLTG 121
P KV ++KD+G GDG T T+ R+A+ + GD K G + P G +L
Sbjct: 192 PDFKVFRNVKDYGAKGDGVTDDTKAIRRAIEDGKMCGDGCYSSTKHGAIIYFPSGTYLVS 251
Query: 122 SFI 124
S I
Sbjct: 252 STI 254
>gi|340617960|ref|YP_004736413.1| iota-carrageenase [Zobellia galactanivorans]
gi|303226605|emb|CBW46642.1| Iota-carrageenase A3 [Zobellia galactanivorans]
gi|339732757|emb|CAZ96032.1| Iota-carrageenase, family GH82 [Zobellia galactanivorans]
Length = 329
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 100 VQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVI 139
+ D+GG + +P G WL G+ L SN L +GA++
Sbjct: 61 ITTLADQGGGVITIPAGTWLLGAIKLKSNIHLVFDQGAIV 100
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 74 VMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
++++KD G+ + T V R + +GG + +PEG W + +L SN L L
Sbjct: 124 IVNMKDKGMTEDAPITDLVNRT----IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHL 179
Query: 134 QKGA 137
KGA
Sbjct: 180 AKGA 183
>gi|261820710|ref|YP_003258816.1| fibronectin type III domain-containing protein [Pectobacterium
wasabiae WPP163]
gi|261604723|gb|ACX87209.1| Fibronectin type III domain protein [Pectobacterium wasabiae
WPP163]
Length = 659
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG + T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGIANDTLAIQKAIDDCTPAAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|336427665|ref|ZP_08607662.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009040|gb|EGN39040.1| hypothetical protein HMPREF0994_03668 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 438
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
+I D+G + DG T+ + + A+ K G ++ VP G +L+G+ L SN L+L+
Sbjct: 4 NIMDYGALPDGKTNNQKQIQAAIEDCA----KTGGRVLVPAGNFLSGTIQLKSNVELYLE 59
Query: 135 KGAVILGSQ 143
KG+V+ S
Sbjct: 60 KGSVLTASN 68
>gi|373953358|ref|ZP_09613318.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889958|gb|EHQ25855.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 523
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 84 DGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
DG T T +KA+ G GGT L +P G ++TG L SN L + GA +L +
Sbjct: 47 DGKTDNTLAIQKAINTAAENG--GGTVL-IPAGQFVTGVINLKSNINLHFENGAALLAT 102
>gi|253689237|ref|YP_003018427.1| Fibronectin type III domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251755815|gb|ACT13891.1| Fibronectin type III domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 659
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 75 MSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFL 133
+++ ++G GDG + T +KA+ G ++ V G + TG+ L S+ T +
Sbjct: 163 LNVTNYGAKGDGIANDTLAIQKAIDDCTPTAYPKGCKVVVEGGTFKTGALFLHSDMTFEV 222
Query: 134 QKGAVILGS 142
KGA +LGS
Sbjct: 223 AKGATLLGS 231
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 83 GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGS 142
GDG T T+ K + KGG + +P+G++++G+ L L LQ+GAV+ GS
Sbjct: 40 GDGKTLNTQ---KIQLVIDGCAQKGGGTVVIPKGVFVSGALFLKRGVNLELQEGAVLKGS 96
Query: 143 QELK 146
+
Sbjct: 97 TNID 100
>gi|61393763|gb|AAX45476.1| polygalacturonase [Lilium longiflorum]
gi|73913442|gb|AAZ91659.1| polygalacturonase [Lilium longiflorum]
Length = 413
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 68 LPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTG 121
+P+ KV ++K FG VGDG T +T+ +A + QA G ++ VPEG++LTG
Sbjct: 26 VPETKV--NVKSFGAVGDGKTDSTQAILRA--WDQACNGFGKQRVIVPEGVYLTG 76
>gi|329961973|ref|ZP_08299984.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530621|gb|EGF57479.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 432
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 77 IKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQK 135
I D+G V D T TE + + KGG + +P+G +L+GS L+L++
Sbjct: 49 ITDYGAVNDSTLLQTEKIQAVIDLASQ---KGGGVIIIPKGTFLSGSLFFKPRTHLYLEE 105
Query: 136 GAVILGSQEL 145
GA++ GS ++
Sbjct: 106 GAMLKGSDDI 115
>gi|86142344|ref|ZP_01060854.1| Exopolygalacturonase precursor [Leeuwenhoekiella blandensis MED217]
gi|85831096|gb|EAQ49553.1| Exopolygalacturonase precursor [Leeuwenhoekiella blandensis MED217]
Length = 442
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 76 SIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
++ D+GV D T TE + + A +GG + VPEG +L+G+ L+L+
Sbjct: 56 TLTDYGVIKDSTLIQTEKIQAVIDTAYA---QGGGVIIVPEGTFLSGALFFKQGTHLYLE 112
Query: 135 KGAVILGSQEL 145
+ V+ GS ++
Sbjct: 113 ENGVLKGSDDI 123
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 72 KVVMSIKDFGVGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTL 131
KV + + GDG T + ++A+ V A GG ++ G++LTGS L S TL
Sbjct: 3 KVNIELAVDAAGDGRTDCSNAIQRAIDTVSA---SGGGKVYFRPGIYLTGSIFLKSGVTL 59
Query: 132 FLQKGAVILG 141
+ +G + G
Sbjct: 60 EIGEGVELRG 69
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 68 LPKRKVVMSIKDFGVGDGTTS--TTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFIL 125
P+R V ++D G G GT TE F+ A+ A GG + V G +L G L
Sbjct: 33 FPER--VCDVRDHGAG-GTRIWFDTEGFQAAI---DACAKAGGGTVRVTRGEYLIGPIWL 86
Query: 126 TSNFTLFLQKGAVILGSQE 144
SN L LQKGA +L + +
Sbjct: 87 KSNIRLELQKGAEVLAATD 105
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 76 SIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLFLQ 134
SIKDFG + + +T T V ++A+ G GGT + +P G++L G S+ +
Sbjct: 40 SIKDFGAIANNSTDNTGVIQQAIDAADKAG--GGTVI-IPPGIYLCGPLQFKSSLNFRID 96
Query: 135 KGAVI 139
GAV+
Sbjct: 97 SGAVL 101
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 74 VMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGSFILTSNFTLF 132
V +I D+G DGTT T A+ G GGT VP G +LTG+ L SN L
Sbjct: 26 VYNIVDYGAPQDGTTLATGAIAAAIEAASNAG--GGTVF-VPSGTYLTGAIFLKSNIELH 82
Query: 133 LQKGAVILGSQEL 145
L GA++ S +L
Sbjct: 83 LSPGAILSFSTDL 95
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 105 DKGGTQLNVPEGLWLTGSFILTSNFTLFLQKGAVILGSQEL 145
+ GG + VP G +LTG+ L SN L + GA++ S EL
Sbjct: 32 NAGGGTVFVPAGTYLTGAIFLKSNIELHVSPGAILSFSTEL 72
>gi|189467634|ref|ZP_03016419.1| hypothetical protein BACINT_04024 [Bacteroides intestinalis DSM
17393]
gi|189435898|gb|EDV04883.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 436
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 64 GDQYLPKRKVVMSIKDFGV-GDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
GD+Y I D+ V D T TE + + + KGG + +P+G +L+G+
Sbjct: 48 GDKY--------KITDYSVVNDSTLIQTEKIQAVIDQASS---KGGGVVIIPKGTYLSGA 96
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
L+L++GAV+ GS ++
Sbjct: 97 LFFKPKTHLYLEEGAVLKGSDDI 119
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 64 GDQYLPKRKVVMSIKDFG-VGDGTTSTTEVFRKAVRYVQAFGDKGGTQLNVPEGLWLTGS 122
G + P + +S G V D T +T +KA+ + GG + + G + TG+
Sbjct: 47 GSRQEPINHITLSANSLGAVADSTVLSTTAIQKAI---DSCAVSGGGTVTLQPGYYQTGA 103
Query: 123 FILTSNFTLFLQKGAVILGSQEL 145
+ S L L KG +L S ++
Sbjct: 104 LFIKSGVNLHLDKGVTLLASPQI 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,286,063,808
Number of Sequences: 23463169
Number of extensions: 91625542
Number of successful extensions: 172906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 426
Number of HSP's that attempted gapping in prelim test: 172095
Number of HSP's gapped (non-prelim): 1068
length of query: 146
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 36
effective length of database: 9,778,246,777
effective search space: 352016883972
effective search space used: 352016883972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)