BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043912
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1
SV=1
Length = 374
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 19/254 (7%)
Query: 7 TLRTLHLLSIGQLASLTFAATNFTSSFIANL-GVDAPVTQSAFSYFTLALVYGGILLYRR 65
T L +++GQ+ SL T TS ++A V+ P+ QS +Y L L+Y +L +R
Sbjct: 36 TWNILKTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRS 95
Query: 66 QR------LQVSWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALILTRLL 119
L+ W+ Y+LLG D++ N++ +AYQ+T++TSV LLD I + L+ +
Sbjct: 96 GSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFI 155
Query: 120 LGTRYSPLKLFGAGICMLGLCVCSSMFFFQVF--------QDLYWAIYLSLLGPCSMLSF 171
L RY + +C+LG+ +M + D+ L LLG S+ +
Sbjct: 156 LHARYRVIHFIAVAVCLLGV---GTMVGADILAGREDNSGSDVLIGDILVLLG-ASLYAI 211
Query: 172 SLQNLEYFVKKNDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVGYAVS 231
S EY VKK R E + M+G++G ++S IQL ++E K + + W I L FV +A+
Sbjct: 212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALC 271
Query: 232 CFMFYTLATFVLKV 245
F Y+ V+KV
Sbjct: 272 MFCLYSFMPLVIKV 285
>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2
SV=2
Length = 408
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 11/242 (4%)
Query: 14 LSIGQLASLTFAATNFTSSFIA-NLGVDAPVTQSAFSYFTLALVYGGILLYRRQR----- 67
+++GQ+ SL TS +++ + + PV QS +Y L LVY L R+
Sbjct: 64 VALGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLA 123
Query: 68 -LQVSWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALILTRLLLGTRYSP 126
L+ W+ Y++LG +DL+ N+L KAYQ+T++TS+ LLD I ++L+ L RY
Sbjct: 124 ILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKA 183
Query: 127 LKLFGAGICMLGL-CVCSSMFFFQVFQ---DLYWAIYLSLLGPCSMLSFSLQNLEYFVKK 182
+ G +C+LG+ C+ + Q + L +LG ++ S EY ++
Sbjct: 184 VHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRT 243
Query: 183 NDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVGYAVSCFMFYTLATFV 242
RVE + MIG++G S IQL+++E K L V W I L +VG++ F Y+ V
Sbjct: 244 LSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVV 303
Query: 243 LK 244
+K
Sbjct: 304 IK 305
>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2
SV=2
Length = 375
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 132/258 (51%), Gaps = 19/258 (7%)
Query: 3 RGHVTLRTLHLLSIGQLASLTFAATNFTSSFIAN-LGVDAPVTQSAFSYFTLALVYGGIL 61
R T L +++GQ+ SL T TS ++A V+ P+ QS +Y L LVY +L
Sbjct: 32 RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91
Query: 62 LYRR------QRLQVSWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALIL 115
++ + L+ W+ Y LLG D++ N+L +AYQ+T++TSV LLD I + L
Sbjct: 92 AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151
Query: 116 TRLLLGTRYSPLKLFGAGICMLGLCVCSSMFFFQVF--------QDLYWAIYLSLLGPCS 167
+ +L RY + +C+LG+ +M + D+ L LLG S
Sbjct: 152 SWFILRARYKVIHFIAVFVCLLGV---GTMVGADILAGREDNSGSDVLIGDILVLLG-AS 207
Query: 168 MLSFSLQNLEYFVKKNDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVG 227
+ + S EY VKK R E + M+G++G ++S IQL ++E K + ++W I L FV
Sbjct: 208 LYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVA 267
Query: 228 YAVSCFMFYTLATFVLKV 245
+A+ F Y+ V+KV
Sbjct: 268 FALCMFCLYSFMPLVIKV 285
>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2
SV=1
Length = 408
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 11/242 (4%)
Query: 14 LSIGQLASLTFAATNFTSSFIA-NLGVDAPVTQSAFSYFTLALVYGGILLYRRQR----- 67
+++GQ+ SL TS ++A + + PV QS +Y L LVY L R+
Sbjct: 64 VALGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLA 123
Query: 68 -LQVSWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALILTRLLLGTRYSP 126
L+ W+ Y++LG +DL+ N+L KAYQ+T++TSV LLD I ++L+ L RY
Sbjct: 124 ILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKA 183
Query: 127 LKLFGAGICMLGL-CVCSSMFFFQVFQ---DLYWAIYLSLLGPCSMLSFSLQNLEYFVKK 182
+ G +C+LG+ C+ + Q + L +LG ++ S E ++
Sbjct: 184 VHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRT 243
Query: 183 NDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVGYAVSCFMFYTLATFV 242
RVE + MIG++G S IQL+++E K L V W I L +VG++ F Y+ V
Sbjct: 244 LSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVV 303
Query: 243 LK 244
+K
Sbjct: 304 IK 305
>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2
PE=2 SV=2
Length = 391
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 14 LSIGQLASLTFAATNFTSSFIA-NLGVDAPVTQSAFSYFTLALVYGGILLYRRQR----- 67
+++GQ+ SL TS +++ + + P+ QS +Y L LVY L R+
Sbjct: 43 VALGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLA 102
Query: 68 -LQVSWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALILTRLLLGTRYSP 126
L+ W+ Y+ LG +D++ +L KA+Q+T+ S+ LL+ I ++L+ L RY
Sbjct: 103 ILKRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKV 162
Query: 127 LKLFGAGICMLGL-CVCSSMFFF--QVFQDLYWAIY-----LSLLGPCSMLSFSLQNLEY 178
L GA C+LG+ C+ + Q D Y + +LG ++ S EY
Sbjct: 163 LHFIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEY 222
Query: 179 FVKKNDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVGYAVSCFMFYTL 238
V+ RVE++ MIG++G S IQL+++E K L V W I L +VG+ F Y+
Sbjct: 223 IVRNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSF 282
Query: 239 ATFVLK 244
V+K
Sbjct: 283 MPVVIK 288
>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC320.08 PE=1 SV=1
Length = 505
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 121/245 (49%), Gaps = 22/245 (8%)
Query: 16 IGQLASLTFAATNFTSSFIANLGVDAPVTQSAFSYFTLALVYGGILLYR---RQRLQV-- 70
+GQ+ SL ATN + +++ + + P Q+ Y L LVY ++R ++ ++
Sbjct: 147 LGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALLTLVYTPYTVFRMGFKKYFEMIF 205
Query: 71 -SWYWYLLLGFVDLQGNFLANKAYQFTSITSVTLLDGCTIAWALILTRLLLGTRYSPLKL 129
+ Y++ F D++GN+ AYQ+T++ S +LLD +IL+ + L RY ++
Sbjct: 206 RHGWKYIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVILSFIFLKVRYHWSQI 265
Query: 130 FGAGICMLGLC--VCSSMFFFQVFQDLYWAI-------YLSLLGPCSMLSFSLQNLEYFV 180
G C+ GL V S + + + Y A+ Y+ + C +S +L+ EYF
Sbjct: 266 LGVVACIGGLVLLVVSDV----ISRGDYSAVNPGLGDGYMIIGATCYGVSNTLE--EYFA 319
Query: 181 KKNDRVEVVCMIGVYGLLVSSIQLSMLELKSLELVKWSTDIILGFVGYAVSCFMFYTLAT 240
K V+ + +YG ++S IQ + + L + W++++ G+ + F+ Y+LA
Sbjct: 320 SKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGYLAGFILVMFLLYSLAP 379
Query: 241 FVLKV 245
+ ++
Sbjct: 380 ILFRM 384
>sp|Q9FWX6|TPK4_ARATH Two-pore potassium channel 4 OS=Arabidopsis thaliana GN=TPK4 PE=2
SV=2
Length = 284
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 135 CMLGLCVCSSMFFFQVFQDLYW--AIYLSLL 163
C +GLCV S F VF+ L W ++YLS++
Sbjct: 161 CAVGLCVGSGALFLHVFERLDWLDSVYLSVI 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.143 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,140,727
Number of Sequences: 539616
Number of extensions: 3095623
Number of successful extensions: 8545
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 8516
Number of HSP's gapped (non-prelim): 31
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)