Citrus Sinensis ID: 043920
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 504 | 2.2.26 [Sep-21-2011] | |||||||
| O80437 | 501 | Glycerol-3-phosphate 2-O- | yes | no | 0.952 | 0.958 | 0.552 | 1e-153 | |
| Q9CAY3 | 502 | Glycerol-3-phosphate acyl | no | no | 0.926 | 0.930 | 0.549 | 1e-144 | |
| Q9LMM0 | 503 | Glycerol-3-phosphate 2-O- | no | no | 0.946 | 0.948 | 0.542 | 1e-144 | |
| Q5XF03 | 500 | Probable glycerol-3-phosp | no | no | 0.932 | 0.94 | 0.555 | 1e-143 | |
| Q9LHS7 | 500 | Glycerol-3-phosphate acyl | no | no | 0.944 | 0.952 | 0.538 | 1e-141 | |
| Q9SHJ5 | 585 | Glycerol-3-phosphate acyl | no | no | 0.938 | 0.808 | 0.450 | 1e-115 | |
| Q9FZ22 | 530 | Probable glycerol-3-phosp | no | no | 0.926 | 0.881 | 0.394 | 7e-94 | |
| Q9SYJ2 | 520 | Probable glycerol-3-phosp | no | no | 0.910 | 0.882 | 0.401 | 2e-93 | |
| P0CAV6 | 222 | Protein CicA OS=Caulobact | yes | no | 0.384 | 0.873 | 0.287 | 4e-05 | |
| B8GX15 | 222 | Protein CicA OS=Caulobact | yes | no | 0.384 | 0.873 | 0.287 | 4e-05 |
| >sp|O80437|GPAT6_ARATH Glycerol-3-phosphate 2-O-acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/487 (55%), Positives = 347/487 (71%), Gaps = 7/487 (1%)
Query: 8 SSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLL 67
+ KC R HTV AD+DGTLL RS+FPY+ LVA EAG +LR L LL++ P L
Sbjct: 11 EQISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYLT 70
Query: 68 YYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLT 127
Y +SE+ I V +F +F GL++ D+E V R+VLP+FYA D+ P++WR+F++ GKR ++T
Sbjct: 71 YLTISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYIIT 130
Query: 128 ANPRIMVEAFLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFG--- 183
A+PRIMVE F+K FL D VLGTE+ K GRATG R PG+LVG K D +L+ FG
Sbjct: 131 ASPRIMVEPFVKTFLGVDKVLGTELEVSKSGRATGFTRKPGILVGQYKRDVVLREFGGLA 190
Query: 184 ETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLM 243
P++GLGD +TD FM++CKEGY+VP + + + + +KL PIIFH+GRLV++P PL+
Sbjct: 191 SDLPDLGLGDSKTDHDFMSICKEGYMVP-RTKCEPLPRNKLLSPIIFHEGRLVQRPTPLV 249
Query: 244 ALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGV 303
ALL LW P+GF L+ +R+ LP Y + G++++V G PPP K
Sbjct: 250 ALLTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKPGQPGH-- 307
Query: 304 LFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLL 363
L VC+HRT+LDP+ +VALGR I VTYS+S+ SE+ISPIKAV L+R R DA+ IK+LL
Sbjct: 308 LLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLL 367
Query: 364 EEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423
EEGDL +CPEGTTCREPFLLRFSALFAELTD +VPVA+ + SMF+GTT RG+K +DP++
Sbjct: 368 EEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPYF 427
Query: 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRAL 483
FMNP P YE+TFL ++P ELTC GKS EVANYIQRV+ TL +E T FTRKDKY L
Sbjct: 428 AFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYAML 487
Query: 484 AGNDGTV 490
AG DG V
Sbjct: 488 AGTDGRV 494
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9CAY3|GPAT5_ARATH Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/482 (54%), Positives = 334/482 (69%), Gaps = 15/482 (3%)
Query: 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG 76
G ++VV++ +GT+L+ SF YF LVAFEA G++R LL P+ LL ++A
Sbjct: 7 GTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAA 66
Query: 77 IQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEA 136
+++ IF + VGLR +IESVARAVLPKFY D+ ++WRVFSSC KR V+T PR+MVE
Sbjct: 67 LKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVER 126
Query: 137 FLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGD-- 193
F K+ L AD V+GTE+ + G TGL+R+ V + + F +P++GLG
Sbjct: 127 FAKEHLRADEVIGTELIVNRFGFVTGLIRETDV--DQSALNRVANLFVGRRPQLGLGKPA 184
Query: 194 RQTDIPFMALCKEGYLVPSKPEVKAVTCDKL---PKPIIFHDGRLVRKPAPLMALLIILW 250
F++LC+E P PE +L P P+IFHDGRLV++P P AL+I+LW
Sbjct: 185 LTASTNFLSLCEEHIHAPI-PENYNHGDQQLQLRPLPVIFHDGRLVKRPTPATALIILLW 243
Query: 251 TPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPP--PAAKKSTGQTGVLFVCS 308
P G LA +RI GA+LP+ Y G +IVKG PP PAA G++GVLFVC+
Sbjct: 244 IPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPAA----GKSGVLFVCT 299
Query: 309 HRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDL 368
HRTL+DP+ LS LGR IP VTYS+SRLSEI+SPI VRL+R R DA+ IK+ L +GDL
Sbjct: 300 HRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDL 359
Query: 369 AMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNP 428
+CPEGTTCREPFLLRFSALFAELTD +VPVAM R+ FH TTARGWKG+DP +FFMNP
Sbjct: 360 VVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNP 419
Query: 429 CPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDG 488
P YE+TFLN+LPME TC SGKS H+VANY+QR++AATL +E T FTRKDKYR LAGNDG
Sbjct: 420 RPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479
Query: 489 TV 490
TV
Sbjct: 480 TV 481
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMM0|GPAT4_ARATH Glycerol-3-phosphate 2-O-acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/485 (54%), Positives = 337/485 (69%), Gaps = 8/485 (1%)
Query: 10 VEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYY 69
+ +C S RE ++ AD+DGTLL RSSFPYF LVA EAG + R L LLL+ PI + Y
Sbjct: 13 ISECKS--REYDSIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPIVIIAYL 70
Query: 70 LVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKR-CVLTA 128
VSES GIQ+LIF SF G+++ +IE V+RAVL +FYA+D+ +S+ VF C KR V+TA
Sbjct: 71 FVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKRKVVVTA 130
Query: 129 NPRIMVEAFLKDFLAADLVLGTEIATYKG--RATGLVRDPGVLVGNKKADALLKAFGETQ 186
NP +MVE F+KD+L D VLGTEI +ATG V+ PGVLVG+ K A+LK FG+
Sbjct: 131 NPIVMVEPFVKDYLGGDKVLGTEIEVNPKTMKATGFVKKPGVLVGDLKRLAILKEFGDDS 190
Query: 187 PEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALL 246
P++GLGDR +D FM++CKEGY+V V + L IIFHDGRLV++P PL AL+
Sbjct: 191 PDLGLGDRTSDHDFMSICKEGYMVHETKSATTVPIESLKNRIIFHDGRLVQRPTPLNALI 250
Query: 247 IILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFV 306
I LW P GF L+ R+ LP V Y + LG+ + ++G PP L+V
Sbjct: 251 IYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPPSPGKPGN--LYV 308
Query: 307 CSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEG 366
+HRT LDPI +++ALGR I VTYSVSRLS ++SPI AV L+RDR DA+ +++LLE+G
Sbjct: 309 LNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKG 368
Query: 367 DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFM 426
DL +CPEGTTCREP+LLRFSALFAEL+D +VPVAM + MF+GTT RG K DP++FFM
Sbjct: 369 DLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFM 428
Query: 427 NPCPAYEVTFLNKLPMELTC-GSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAG 485
NP P+YE TFL++LP E+T G GK+ EVANY+Q+VI L +E T TRKDKY L G
Sbjct: 429 NPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRKDKYLLLGG 488
Query: 486 NDGTV 490
NDG V
Sbjct: 489 NDGKV 493
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/475 (55%), Positives = 339/475 (71%), Gaps = 5/475 (1%)
Query: 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQ 78
E ++ AD+DGTLL RSSFPYF LVA EAG +LR L LLL+ P + Y VSES GIQ
Sbjct: 20 EYDSIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPFVIISYLFVSESLGIQ 79
Query: 79 VLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFL 138
+LIF SF GL++ DIE V+RAVLP+FYA+D+ +S+ VF C ++ V+TANP +MVEAF+
Sbjct: 80 ILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRKVVVTANPIVMVEAFV 139
Query: 139 KDFLAADLVLGTEIATY--KGRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQT 196
KD+L D VLGTEI RATG V+ PGVLVG+ K A+LK FG P++GLGDR +
Sbjct: 140 KDYLGGDKVLGTEIEVNPKTNRATGFVKKPGVLVGDLKRLAILKEFGNESPDLGLGDRTS 199
Query: 197 DIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLIILWTPIGFF 256
D FM+LCK+GY+V + + ++L I+FHDGRL ++P PL A++ LW P GF
Sbjct: 200 DHDFMSLCKKGYMVHATKSATTIPKERLKNRIVFHDGRLAQRPTPLNAIITYLWLPFGFI 259
Query: 257 LACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPI 316
L+ +R+ LP V Y + LG+ + ++G PP S G G L+V +HRT LDPI
Sbjct: 260 LSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPP--SPGTLGNLYVLNHRTALDPI 317
Query: 317 FLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGTT 376
+++ALGR I VTYSVSRLS ++SPI AV L+RDRATDA+ ++KLLE+GDL +CPEGTT
Sbjct: 318 IVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTT 377
Query: 377 CREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTF 436
CRE +LLRFSALFAEL+D +VPVAM + MF+GTT RG K DP++FFMNP P+YE TF
Sbjct: 378 CREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATF 437
Query: 437 LNKLPMELTC-GSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTV 490
L++LP E+T G GK+ EVANY+Q+VI A L +E T TRKDKY L GNDG V
Sbjct: 438 LDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDGKV 492
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LHS7|GPAT7_ARATH Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/485 (53%), Positives = 330/485 (68%), Gaps = 9/485 (1%)
Query: 21 HTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVL 80
++VV++++GTLL+ F YF LVAFEA G++R LL PI LL L + ++++
Sbjct: 9 YSVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLM 68
Query: 81 IFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKD 140
IF + GL ++IESVARAVLPKF+ D+ ++WR F SC KR V+T PR+MVE F KD
Sbjct: 69 IFVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKD 128
Query: 141 FLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQ-TDI 198
L+AD V+GTEI + G ATGL+++ V +++ F + +P++GLG +D
Sbjct: 129 HLSADEVIGTEIVVNRFGYATGLIQETNV--DQSVFNSVANLFVDRRPQLGLGRHIISDS 186
Query: 199 P-FMALCKEGYL--VPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLIILWTPIGF 255
P F++LC+E VPS P P+IFHDGRLV+ P P AL+I+LW P G
Sbjct: 187 PTFLSLCEEQVHAPVPSNYNGHNQRLHVQPLPVIFHDGRLVKLPTPATALIILLWIPFGI 246
Query: 256 FLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDP 315
LA +RI G LLP+ + Y R IVKG PP A+ +TG GVLFVC+HRTL+DP
Sbjct: 247 ILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPP--AQATTGNPGVLFVCTHRTLMDP 304
Query: 316 IFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGT 375
+ LS LGR IP VTYS+SRLSEI+SPI RL+R R DA IKK L GDL + PEGT
Sbjct: 305 VVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGT 364
Query: 376 TCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVT 435
TCREPFLLRFSALFAELTD +VPVAM R+ FH TTARGWKG+DP +FFMNP P YEVT
Sbjct: 365 TCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVT 424
Query: 436 FLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVVEKPF 495
FLN+L +E TC SGKS ++VANY+QR++AATL +E T FTRKDKYR LAGNDGTV F
Sbjct: 425 FLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYLSF 484
Query: 496 IKPNK 500
+ K
Sbjct: 485 LDQVK 489
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHJ5|GPAT1_ARATH Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/495 (45%), Positives = 313/495 (63%), Gaps = 22/495 (4%)
Query: 13 CS-SIGREKHTVVADMDGTLLRGRSS------FPYFALVAFEAGGILRLLFLLLASPIAG 65
CS S + T D+DG LLR SS FPYF LVAFE G I+R + LLL+
Sbjct: 95 CSVSSDHYRDTFFCDIDGVLLRQHSSKHFHTFFPYFMLVAFEGGSIIRAILLLLS---CS 151
Query: 66 LLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCG-KRC 124
L+ L E+ ++VL F +F GLRV D+++V+R+VLPKF+ +L+ + + +++ +
Sbjct: 152 FLWTLQQETK-LRVLSFITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKV 210
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYK--GRA--TGLVRDPGVLVGNKKADALLK 180
V T+ P+++VE FL++ L AD V+GT++ K GR TGL G ++ +K A+
Sbjct: 211 VFTSLPQVLVERFLREHLNADDVIGTKLQEIKVMGRKFYTGLASGSGFVLKHKSAEDYFF 270
Query: 181 AFGETQPEIGLGDRQT--DIPFMALCKEGYLVPSKPEV---KAVTCDKLPKPIIFHDGRL 235
+ +P +G+G + D F+++CKE Y + + A+ ++ PKP+IFHDGRL
Sbjct: 271 D-SKKKPALGIGSSSSPQDHIFISICKEAYFWNEEESMSKNNALPRERYPKPLIFHDGRL 329
Query: 236 VRKPAPLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAK 295
P PL L + +W PIGF LA RI+ G LP + GVR+ K +
Sbjct: 330 AFLPTPLATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGR 389
Query: 296 KSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATD 355
G +GVL+VC+HRTLLDP+FL+ +LG+P+ VTYS+S+ SE I+P+K V L RDR D
Sbjct: 390 PEKGNSGVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKD 449
Query: 356 ASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 415
+++LL +GDL +CPEGTTCREP+LLRFS LFAELT+++VPVA+ R+SMF+GTTA G
Sbjct: 450 GEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASG 509
Query: 416 WKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFT 475
K +DP +F MNP P Y + L KLP E+TC GKSS EVAN+IQ +A L +E T T
Sbjct: 510 LKCLDPIFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLT 569
Query: 476 RKDKYRALAGNDGTV 490
R+DKY LAGN+G V
Sbjct: 570 RRDKYLVLAGNEGIV 584
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Involved in pollen development, by being required for tapetum differentiation and male fertility. In addition to the sporophytic effect, it also exerts a gametophytic effect on pollen performance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ22|GPAT2_ARATH Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 344 bits (883), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/512 (39%), Positives = 298/512 (58%), Gaps = 45/512 (8%)
Query: 11 EKCSSIGREK------HTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIA 64
+KC S G + HT++ +++G LL+ S FPYF +VAFEAGG++R LFLL+ P
Sbjct: 35 QKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLLVLYPFI 94
Query: 65 GLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRC 124
L+ Y G++ ++ SF G++ V ++VLPK++ D+ E ++V GKR
Sbjct: 95 SLMSY----EMGLKTMVMLSFFGVKKESFR-VGKSVLPKYFLEDVGLEMFQVLKRGGKRV 149
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184
++ P++M++ FL+D+L ++V+G ++ G G+V D L AF +
Sbjct: 150 AVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIVED---------KKNLEIAFDK 200
Query: 185 TQPE--IGLGDRQTDIP----------FMALCKEGYLVPS--KPEVKAVTCDKLPKPIIF 230
E +G G R I F C+E Y V + K + + D+ PKP+IF
Sbjct: 201 VVQEERLGSGRRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPQDQYPKPLIF 260
Query: 231 HDGRLVRKPAPLMALLIILWTPIGFFLACLRIAAGALLPMSTV--YYAFWALGVRVIVKG 288
HDGRL KP PL L++ +W P LA R+ G LP S + AF + + + V
Sbjct: 261 HDGRLAVKPTPLNTLVLFMWAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNN 320
Query: 289 TPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYSVSRLSEIISPIKAVR 347
+ + + G LFVC+HRTLLDP+++S AL + + VTYS+SRLSE+++PIK VR
Sbjct: 321 HNDLIS--ADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVR 378
Query: 348 LSRDRATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSM 407
L+RDR D ++KLL +GDL +CPEGTTCREP+LLRFS LF+E+ D +VPVA+ + ++
Sbjct: 379 LTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTF 438
Query: 408 FHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKL--PMELTC----GSGKSSHEVANYIQR 461
F+GTTA G K DP +F +NP P+Y V L+ + TC +GK + EVAN++Q
Sbjct: 439 FYGTTASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQH 498
Query: 462 VIAATLSYESTRFTRKDKYRALAGNDGTVVEK 493
I L +E T TR+DKY LAGN+G V +K
Sbjct: 499 EIGNALGFECTNLTRRDKYLILAGNNGVVKKK 530
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYJ2|GPAT3_ARATH Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/486 (40%), Positives = 282/486 (58%), Gaps = 27/486 (5%)
Query: 20 KHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQV 79
+HT++ +++G LL+ S FPYF LVAFEAGG++R L + P+ L+ S G++V
Sbjct: 44 RHTLIFNVEGALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLISLM----SHEMGVKV 99
Query: 80 LIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTAN-PRIMVEAFL 138
++ SF G++ + RAVLPK++ D+ E + V GK+ ++ + P++M+E FL
Sbjct: 100 MVMVSFFGIKKEGFRA-GRAVLPKYFLEDVGLEMFEVLKRGGKKIGVSDDLPQVMIEGFL 158
Query: 139 KDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL-----KAFGETQPEIGLGD 193
+D+L D+V+G E+ G G++ D K D + K T IG+
Sbjct: 159 RDYLEIDVVVGREMKVVGGYYLGIMED------KTKHDLVFDELVRKERLNTGRVIGITS 212
Query: 194 RQTDIP---FMALCKEGYLVP--SKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLII 248
T + F C+E Y V K + + + PKP+IFHDGRL KP + L++
Sbjct: 213 FNTSLHRYLFSQFCQEIYFVKKSDKRSWQTLPRSQYPKPLIFHDGRLAIKPTLMNTLVLF 272
Query: 249 LWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQ-TGVLFVC 307
+W P A R+ +P S G R+ V + K+ Q G LFVC
Sbjct: 273 MWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVC 332
Query: 308 SHRTLLDPIFLSVAL-GRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEG 366
+HRTLLDP++++ AL + I TVTYS+SR+SEI++PIK VRL+RDR +D ++KLL EG
Sbjct: 333 NHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEG 392
Query: 367 DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFM 426
DL +CPEGTTCREP+LLRFS LF E++D +VPVA+ ++ F+GTTA G K +DP +F +
Sbjct: 393 DLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLL 452
Query: 427 NPCPAYEVTFLNKLPMELTCG--SGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALA 484
+P P Y + FL+ + TC GK EVAN +Q I L +E T TRKDKY LA
Sbjct: 453 DPYPTYTIQFLDPVSGA-TCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILA 511
Query: 485 GNDGTV 490
GN+G V
Sbjct: 512 GNNGVV 517
|
Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P0CAV6|CICA_CAUCR Protein CicA OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=cicA PE=4 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 5 GFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAG-----GILRLLFLLL 59
G +S +G E V D DGTL S + A + + AG G+LRL L+
Sbjct: 10 GLSASRPMTGEMGHEPLLVAFDFDGTLTVKDS---FNAFLKWRAGPRWSFGVLRLTPALI 66
Query: 60 ASPIAGLLYYLVSESAGIQVLIFASFV-GLRVTDIESVARAVLPKFYASDLHPES---WR 115
A Y ++ F+ G V IE+ ARA F S L P++ WR
Sbjct: 67 A-------YVFDRNRGKLKAAAVRQFLKGATVAQIENDARAFAEAFAPSLLRPDAVAVWR 119
Query: 116 VFSSCG-KRCVLTANPRIMVEAFLKDFLAADLVLGTEI-ATYKGRATGLVRDPGVLVGNK 173
+ + G K ++TA+P ++V F + L ADL++GT + + GR G + D +
Sbjct: 120 GWRAKGAKMVIVTASPDLIVAPFARG-LGADLLIGTRLRCSDDGRILGGL-DGNNCRAKE 177
Query: 174 KADALLKAFG-ETQPEIGLGDRQTDIPFMALCKE-GYLV 210
K L + FG + + GD D +A+ E GY +
Sbjct: 178 KVIRLREVFGPDVRLTAAYGDTSGDTEMLAIADEKGYRI 216
|
Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650) |
| >sp|B8GX15|CICA_CAUCN Protein CicA OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=cicA PE=4 SV=1 | Back alignment and function description |
|---|
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 5 GFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAG-----GILRLLFLLL 59
G +S +G E V D DGTL S + A + + AG G+LRL L+
Sbjct: 10 GLSASRPMTGEMGHEPLLVAFDFDGTLTVKDS---FNAFLKWRAGPRWSFGVLRLTPALI 66
Query: 60 ASPIAGLLYYLVSESAGIQVLIFASFV-GLRVTDIESVARAVLPKFYASDLHPES---WR 115
A Y ++ F+ G V IE+ ARA F S L P++ WR
Sbjct: 67 A-------YVFDRNRGKLKAAAVRQFLKGATVAQIENDARAFAEAFAPSLLRPDAVAVWR 119
Query: 116 VFSSCG-KRCVLTANPRIMVEAFLKDFLAADLVLGTEI-ATYKGRATGLVRDPGVLVGNK 173
+ + G K ++TA+P ++V F + L ADL++GT + + GR G + D +
Sbjct: 120 GWRAKGAKMVIVTASPDLIVAPFARG-LGADLLIGTRLRCSDDGRILGGL-DGNNCRAKE 177
Query: 174 KADALLKAFG-ETQPEIGLGDRQTDIPFMALCKE-GYLV 210
K L + FG + + GD D +A+ E GY +
Sbjct: 178 KVIRLREVFGPDVRLTAAYGDTSGDTEMLAIADEKGYRI 216
|
Caulobacter crescentus (strain NA1000 / CB15N) (taxid: 565050) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 504 | ||||||
| 224138190 | 501 | predicted protein [Populus trichocarpa] | 0.994 | 1.0 | 0.856 | 0.0 | |
| 224091505 | 501 | predicted protein [Populus trichocarpa] | 0.988 | 0.994 | 0.855 | 0.0 | |
| 255558288 | 504 | ER glycerol-phosphate acyltransferase [R | 0.994 | 0.994 | 0.858 | 0.0 | |
| 225452611 | 510 | PREDICTED: glycerol-3-phosphate acyltran | 0.984 | 0.972 | 0.826 | 0.0 | |
| 388894442 | 526 | required for arbuscular mycorrhization 2 | 0.996 | 0.954 | 0.818 | 0.0 | |
| 225424841 | 503 | PREDICTED: glycerol-3-phosphate acyltran | 0.998 | 1.0 | 0.845 | 0.0 | |
| 356577516 | 512 | PREDICTED: glycerol-3-phosphate acyltran | 0.998 | 0.982 | 0.824 | 0.0 | |
| 357439161 | 568 | ER glycerol-phosphate acyltransferase [M | 0.996 | 0.883 | 0.818 | 0.0 | |
| 356533281 | 509 | PREDICTED: glycerol-3-phosphate acyltran | 0.998 | 0.988 | 0.823 | 0.0 | |
| 449459508 | 511 | PREDICTED: glycerol-3-phosphate 2-O-acyl | 0.982 | 0.968 | 0.798 | 0.0 |
| >gi|224138190|ref|XP_002322752.1| predicted protein [Populus trichocarpa] gi|222867382|gb|EEF04513.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/502 (85%), Positives = 461/502 (91%), Gaps = 1/502 (0%)
Query: 3 VSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASP 62
+ FP+ V+KC+SIGREKHTVVADMDGTLLRGRSSFPYFAL+AFEAGGI RL+FLLLASP
Sbjct: 1 MDSFPT-VDKCASIGREKHTVVADMDGTLLRGRSSFPYFALLAFEAGGIFRLIFLLLASP 59
Query: 63 IAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGK 122
+AGLLYY VSESAGI+VLIFA+ G++V+DIESVARAVLPKFY+SDLH ESWRVFSSCGK
Sbjct: 60 LAGLLYYFVSESAGIKVLIFATCAGMKVSDIESVARAVLPKFYSSDLHSESWRVFSSCGK 119
Query: 123 RCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182
RCVLTANPRIMVEAFLKDFL ADLVLGTE++TYKGRATG V+ PGVLVG KADAL KAF
Sbjct: 120 RCVLTANPRIMVEAFLKDFLGADLVLGTEMSTYKGRATGFVQSPGVLVGKNKADALKKAF 179
Query: 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPL 242
G TQPEIGLGDR TD PFMALCKEGY+VP KPEV+AVT DKLPKP+IFHDGRLV+KP PL
Sbjct: 180 GMTQPEIGLGDRHTDAPFMALCKEGYIVPPKPEVEAVTTDKLPKPVIFHDGRLVQKPTPL 239
Query: 243 MALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTG 302
ALL ILW PIGF LACLRIAAG+LLPM VYYAFWALGVRVI+KGTPPP AKKS GQ+G
Sbjct: 240 SALLTILWIPIGFILACLRIAAGSLLPMPMVYYAFWALGVRVIIKGTPPPPAKKSIGQSG 299
Query: 303 VLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKL 362
VLF+CSHRTLLDPIFLS ALGRPIP VTYSVSRLSEIISPIK VRLSRDRATDAS IKKL
Sbjct: 300 VLFICSHRTLLDPIFLSTALGRPIPAVTYSVSRLSEIISPIKTVRLSRDRATDASMIKKL 359
Query: 363 LEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422
LEEGDLA+CPEGTTCREPFLLRFSALFAELTD+LVPVA+VNRMSMFHGTTARGWKGMDPF
Sbjct: 360 LEEGDLAICPEGTTCREPFLLRFSALFAELTDQLVPVAVVNRMSMFHGTTARGWKGMDPF 419
Query: 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRA 482
YFFMNP PAYEVTFLN+LP ELTC GKSSHEVANYIQRVIAATLSYE T FTR+DKYRA
Sbjct: 420 YFFMNPSPAYEVTFLNRLPQELTCTGGKSSHEVANYIQRVIAATLSYECTSFTRRDKYRA 479
Query: 483 LAGNDGTVVEKPFIKPNKVMGC 504
LAGNDGTVVEK ++ NKVMGC
Sbjct: 480 LAGNDGTVVEKTKLQANKVMGC 501
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091505|ref|XP_002309276.1| predicted protein [Populus trichocarpa] gi|222855252|gb|EEE92799.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/499 (85%), Positives = 455/499 (91%), Gaps = 1/499 (0%)
Query: 6 FPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAG 65
FP+ V+KC+SIGREKH+VVADMDGTLLRGRSSFPYFAL+AFEAGGI RLLFLLL SP+AG
Sbjct: 4 FPT-VDKCASIGREKHSVVADMDGTLLRGRSSFPYFALLAFEAGGIFRLLFLLLNSPLAG 62
Query: 66 LLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCV 125
LLYY VSESAGI+VLIFA+ G++++DIESVARAVLPKFY+SDLH ESWRVFSSCGKRCV
Sbjct: 63 LLYYFVSESAGIKVLIFATCAGMKLSDIESVARAVLPKFYSSDLHSESWRVFSSCGKRCV 122
Query: 126 LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET 185
LTANPRIMVEAFLKDFL ADLVLGTEI TYKGRATG V+ PGVLVG KADAL KAFG+T
Sbjct: 123 LTANPRIMVEAFLKDFLGADLVLGTEILTYKGRATGFVQSPGVLVGKNKADALKKAFGKT 182
Query: 186 QPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMAL 245
QPEIGLGDR TD PFMALCKEGY+VP KPEV+AVT DKLPKP+IFHDGRLV+KP PL AL
Sbjct: 183 QPEIGLGDRHTDAPFMALCKEGYIVPPKPEVEAVTTDKLPKPVIFHDGRLVQKPTPLSAL 242
Query: 246 LIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLF 305
LIILW PIGF LACLRIAAG+LLPM VYYAFWALGVRV +KGTPPP AKKS GQ+GVLF
Sbjct: 243 LIILWIPIGFILACLRIAAGSLLPMPMVYYAFWALGVRVNIKGTPPPPAKKSIGQSGVLF 302
Query: 306 VCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEE 365
VCSHRTLLDPIFLS ALGRPIP VTYS+SRLSEIISPIK VRLSRDRA DAS IKKLLEE
Sbjct: 303 VCSHRTLLDPIFLSTALGRPIPAVTYSLSRLSEIISPIKTVRLSRDRAADASMIKKLLEE 362
Query: 366 GDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFF 425
GDLA+CPE TTCREPFLLRFSALFAELTDELVPVAM NRMSMFHGTTARGWKGMDPFYFF
Sbjct: 363 GDLAICPERTTCREPFLLRFSALFAELTDELVPVAMANRMSMFHGTTARGWKGMDPFYFF 422
Query: 426 MNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAG 485
MNP PAYEVTFLNKLP+ELT GKSSHEVANYIQRVIAATLSYE T FTR+DKYRALAG
Sbjct: 423 MNPSPAYEVTFLNKLPLELTLSGGKSSHEVANYIQRVIAATLSYECTSFTRRDKYRALAG 482
Query: 486 NDGTVVEKPFIKPNKVMGC 504
NDG VVEK ++ NKVMGC
Sbjct: 483 NDGNVVEKTKVQANKVMGC 501
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558288|ref|XP_002520171.1| ER glycerol-phosphate acyltransferase [Ricinus communis] gi|223540663|gb|EEF42226.1| ER glycerol-phosphate acyltransferase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/502 (85%), Positives = 457/502 (91%), Gaps = 1/502 (0%)
Query: 3 VSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASP 62
V FP V KC+S GREKHTVVADMDGTL GRSSFPYFAL+AFEAGGI RLLFLLLASP
Sbjct: 4 VDSFPE-VSKCASKGREKHTVVADMDGTLFIGRSSFPYFALIAFEAGGIFRLLFLLLASP 62
Query: 63 IAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGK 122
+A LLYY VSESAGIQVLIFASF G++V+DIESVARAVLPKFY+SDLHPESWRVFSSCGK
Sbjct: 63 LAALLYYFVSESAGIQVLIFASFAGMKVSDIESVARAVLPKFYSSDLHPESWRVFSSCGK 122
Query: 123 RCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182
RCVLTANPRIMVEAFLKDFL ADLV GTEI+TYKGRATG VR PGVLVG KA+AL KAF
Sbjct: 123 RCVLTANPRIMVEAFLKDFLGADLVFGTEISTYKGRATGFVRTPGVLVGKNKANALKKAF 182
Query: 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPL 242
G+ +PE+GLGDR+TD PFMALCKEGYLVP KPEV+AVT DKLPKPI+FHDGRLV+KP PL
Sbjct: 183 GDARPEVGLGDRRTDAPFMALCKEGYLVPPKPEVRAVTGDKLPKPIVFHDGRLVQKPTPL 242
Query: 243 MALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTG 302
MALLIILW PIGF LACLRIAAG+LLPM VYYAF ALGVRV VKG PPP AKKSTGQ+G
Sbjct: 243 MALLIILWIPIGFILACLRIAAGSLLPMPMVYYAFLALGVRVTVKGNPPPPAKKSTGQSG 302
Query: 303 VLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKL 362
VLFVCSHRTLLDPIFLS ALGRPI VTYSVSRLSEIISPIK VRLSRDRATDA+ IKKL
Sbjct: 303 VLFVCSHRTLLDPIFLSTALGRPIAAVTYSVSRLSEIISPIKTVRLSRDRATDAAMIKKL 362
Query: 363 LEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422
L EGDLA+CPEGTTCREPFLLRFSALFAELTD++VPVAMVNRMSMFHGTTARGWKGMDPF
Sbjct: 363 LVEGDLAICPEGTTCREPFLLRFSALFAELTDQIVPVAMVNRMSMFHGTTARGWKGMDPF 422
Query: 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRA 482
YFFMNP PAYEVTFL+KLP ELTC SGKSSHEVANYIQRVIAATLSYE T FTRKDKYRA
Sbjct: 423 YFFMNPSPAYEVTFLSKLPQELTCSSGKSSHEVANYIQRVIAATLSYECTGFTRKDKYRA 482
Query: 483 LAGNDGTVVEKPFIKPNKVMGC 504
LAGNDG+VVEKP ++ NKVMGC
Sbjct: 483 LAGNDGSVVEKPKLEANKVMGC 504
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452611|ref|XP_002276032.1| PREDICTED: glycerol-3-phosphate acyltransferase 6 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/497 (82%), Positives = 451/497 (90%), Gaps = 1/497 (0%)
Query: 9 SVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLY 68
++++C+SIGREK TVVADMDGTLLRGRSSFPYFALVAFE GGI RLL LLL SP+AG+LY
Sbjct: 14 TIDQCTSIGREKETVVADMDGTLLRGRSSFPYFALVAFEVGGIFRLLLLLLCSPLAGVLY 73
Query: 69 YLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTA 128
Y +SE AGIQVLIFA+FVG++V+DIESVARAVLPKFYASDLHPE+WRVFSSCGKRCVLTA
Sbjct: 74 YFISEPAGIQVLIFATFVGMKVSDIESVARAVLPKFYASDLHPEAWRVFSSCGKRCVLTA 133
Query: 129 NPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ-P 187
NPRIMVEAFLKDFL AD+VLGTE+ TYKGRATGLVR GVLVG +KA+AL AF ET P
Sbjct: 134 NPRIMVEAFLKDFLGADMVLGTEVDTYKGRATGLVRGGGVLVGKRKAEALRNAFSETSLP 193
Query: 188 EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLI 247
EIGLGDR+TD PFM+LCKE Y+VP+KPEV+AV+ DKLPKPI+FHDGRLV+KP P MALL
Sbjct: 194 EIGLGDRETDYPFMSLCKESYIVPAKPEVEAVSHDKLPKPIVFHDGRLVQKPTPFMALLT 253
Query: 248 ILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVC 307
ILW P+GF LACLRIAAGALLPM VYYAFWALGVRV +KG PPP AKKS GQ+GVLF+C
Sbjct: 254 ILWIPVGFLLACLRIAAGALLPMPLVYYAFWALGVRVYIKGNPPPPAKKSIGQSGVLFIC 313
Query: 308 SHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGD 367
SHRTLLDPIFLS ALGRPIP VTYS+SRLSE ISPIK VRLSRDRATDA+ IKKLLE GD
Sbjct: 314 SHRTLLDPIFLSAALGRPIPAVTYSLSRLSEFISPIKTVRLSRDRATDAAMIKKLLEAGD 373
Query: 368 LAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMN 427
LA+CPEGTTCREPFLLRFSALF+ELTDELVPVAM NRM+MFHGTTARGWKGMDPFY+FMN
Sbjct: 374 LAICPEGTTCREPFLLRFSALFSELTDELVPVAMANRMTMFHGTTARGWKGMDPFYYFMN 433
Query: 428 PCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGND 487
P PAYEV FLNKLP ELTCG+GKSSH+VANYIQR+IAA+LSYE T FTRKDKYRALAGND
Sbjct: 434 PSPAYEVNFLNKLPHELTCGAGKSSHDVANYIQRMIAASLSYECTNFTRKDKYRALAGND 493
Query: 488 GTVVEKPFIKPNKVMGC 504
GTVVEKP + NKVMGC
Sbjct: 494 GTVVEKPKVDANKVMGC 510
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388894442|gb|AFK81970.1| required for arbuscular mycorrhization 2 [Medicago truncatula] gi|388894446|gb|AFK81972.1| required for arbuscular mycorrhization 2 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/506 (81%), Positives = 452/506 (89%), Gaps = 4/506 (0%)
Query: 1 MAVSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLA 60
MA S FP+ V KC+SIGREKHTVVADMDGTLL GRSSFPYFAL+AFE GG+LRLL LLA
Sbjct: 23 MASSTFPT-VNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALIAFEVGGVLRLLIYLLA 81
Query: 61 SPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC 120
SPIA +LYY +SESAGIQVL+FAS G++++ IESVARAVLPKFY+SDLHPE+WRVFSSC
Sbjct: 82 SPIAAILYYFISESAGIQVLVFASMAGMKLSSIESVARAVLPKFYSSDLHPETWRVFSSC 141
Query: 121 GKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180
GKRCVLTANPRIMVE FLK+FL AD+VLGTEIA+YKGRATGL+ PG+LVG+KKA L K
Sbjct: 142 GKRCVLTANPRIMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGDKKAQVLKK 201
Query: 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPA 240
FG+ +P+IGLGDR TD PFMALCKEGY+VP+KP+V VT DKLPKPIIFHDGRLV+KP
Sbjct: 202 TFGDEKPDIGLGDRVTDAPFMALCKEGYIVPAKPKVTTVTSDKLPKPIIFHDGRLVQKPT 261
Query: 241 PLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAK--KST 298
PLMALLIILW PIGF LACLRIAAG+LLPM VY AF ALGVRVIVKGTPPP + K+
Sbjct: 262 PLMALLIILWIPIGFPLACLRIAAGSLLPMKFVYCAFKALGVRVIVKGTPPPPVETSKTN 321
Query: 299 GQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDAST 358
Q+GVLF+CSHRTLLDPIFLS ALGR IP VTYSVSRLSEIISPIK VRLSRDRATDA+
Sbjct: 322 HQSGVLFICSHRTLLDPIFLSTALGRAIPAVTYSVSRLSEIISPIKTVRLSRDRATDAAM 381
Query: 359 IKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG 418
IKKLL+EGDLA+CPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG
Sbjct: 382 IKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG 441
Query: 419 MDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKD 478
MDPFYFFMNP P YEVTFLNKLP ELTCGSGK+SHEVANYIQRV+A+TLSYE T FTR+D
Sbjct: 442 MDPFYFFMNPSPVYEVTFLNKLPKELTCGSGKTSHEVANYIQRVVASTLSYECTSFTRRD 501
Query: 479 KYRALAGNDGTVVEKPFIKPNKVMGC 504
KYRALAGNDGTVVEK K NKVMGC
Sbjct: 502 KYRALAGNDGTVVEKTN-KANKVMGC 526
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424841|ref|XP_002268513.1| PREDICTED: glycerol-3-phosphate acyltransferase 6 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/504 (84%), Positives = 457/504 (90%), Gaps = 1/504 (0%)
Query: 1 MAVSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLA 60
MAV+ FP+ V++C SIGREKHTVVADMDGTLL GRSSFPYFALVAFE GG+LRLLFLLLA
Sbjct: 1 MAVTTFPT-VDQCQSIGREKHTVVADMDGTLLIGRSSFPYFALVAFEGGGVLRLLFLLLA 59
Query: 61 SPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC 120
SP+AGLLYY VSESAGIQ+LIF +F G++V+DIESVARAVLPKFY SDLHPESWRVFSSC
Sbjct: 60 SPLAGLLYYFVSESAGIQILIFVTFAGMKVSDIESVARAVLPKFYLSDLHPESWRVFSSC 119
Query: 121 GKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180
GKRCVLTANPRIMVEAFLKDFL ADLVLGTEIATYKGRATG V DPGVLVG KA AL K
Sbjct: 120 GKRCVLTANPRIMVEAFLKDFLGADLVLGTEIATYKGRATGFVCDPGVLVGKNKAYALNK 179
Query: 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPA 240
FGETQPEIGLGDR TD PFMA CKEGY+V +KPEVKAVT DKLPKPIIFHD RLV+KP
Sbjct: 180 TFGETQPEIGLGDRHTDFPFMASCKEGYIVAAKPEVKAVTSDKLPKPIIFHDSRLVQKPT 239
Query: 241 PLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQ 300
PL ALL +LW PIGF LACLRIAAG+LLPM VY+AFWALGVRV VKG+PPP AKKS GQ
Sbjct: 240 PLTALLTLLWIPIGFALACLRIAAGSLLPMRIVYHAFWALGVRVSVKGSPPPVAKKSIGQ 299
Query: 301 TGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIK 360
+GVLF+CSHRTLLDPIFLS ALGRPIP VTYSVSRLSE ISPIK +RLSRDR DA+ IK
Sbjct: 300 SGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEFISPIKTIRLSRDRVKDAAMIK 359
Query: 361 KLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMD 420
KLLEEGDLA+CPEGTTCREPFLLRFSALFAELTD+LVPVAM+NRMSMFHGTTARGWKGMD
Sbjct: 360 KLLEEGDLAICPEGTTCREPFLLRFSALFAELTDQLVPVAMMNRMSMFHGTTARGWKGMD 419
Query: 421 PFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKY 480
PF+FFMNP PAYEVTFLNKLP+ELTC SGKSSHEVANY+QRVIAATLSYE T FTRKDKY
Sbjct: 420 PFFFFMNPSPAYEVTFLNKLPLELTCSSGKSSHEVANYMQRVIAATLSYECTSFTRKDKY 479
Query: 481 RALAGNDGTVVEKPFIKPNKVMGC 504
RALAGNDGTV +KP + P+KVMGC
Sbjct: 480 RALAGNDGTVPKKPLLYPDKVMGC 503
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356577516|ref|XP_003556870.1| PREDICTED: glycerol-3-phosphate acyltransferase 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/513 (82%), Positives = 456/513 (88%), Gaps = 10/513 (1%)
Query: 1 MAVSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLA 60
MA+S FP+ V KC+SIGREKHTVVADMDGTLL GRSSFPYFALVAFEAGGILRLLF +LA
Sbjct: 1 MALSTFPT-VNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALVAFEAGGILRLLFYVLA 59
Query: 61 SPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC 120
SPIA LLYY +SESAGIQVLIFAS G++V+ IESVARAVLPKFYA D+HPESWRVFSSC
Sbjct: 60 SPIAALLYYFISESAGIQVLIFASMAGMKVSSIESVARAVLPKFYAGDVHPESWRVFSSC 119
Query: 121 GKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180
GKRCVLTANPR+MVE FLK+FL AD+VLGTEIA+YKGRATGL+ PG+LVG KKADAL K
Sbjct: 120 GKRCVLTANPRVMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGKKKADALKK 179
Query: 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPA 240
AFGE +P+IGLGDRQTD PFMALCKEGY+VP KPEVK+V+ DKLPKPIIFHDGRLV+KP
Sbjct: 180 AFGEEKPDIGLGDRQTDAPFMALCKEGYIVPPKPEVKSVSTDKLPKPIIFHDGRLVQKPT 239
Query: 241 PLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKS--- 297
PL+ALL ILW PI F LACLR+AAG+LLPM VYYAFWALGVRVI+KG PPP KS
Sbjct: 240 PLIALLTILWMPIAFPLACLRMAAGSLLPMHLVYYAFWALGVRVIIKGNPPPKVTKSNPN 299
Query: 298 -----TGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDR 352
+GVLF+CSHRTLLDPIFLS ALGRPIP VTYSVSRLSEIISPIK VRL+RDR
Sbjct: 300 PNPNNNNDSGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEIISPIKTVRLNRDR 359
Query: 353 ATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTT 412
A DA+ IKKLL+EGDLA+CPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTT
Sbjct: 360 AIDAAMIKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTT 419
Query: 413 ARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYEST 472
ARGWKGMDPFYFFMNP PAYEVTFLNKLP ELTCG+GKSSH+VANYIQRVIAATLSYE T
Sbjct: 420 ARGWKGMDPFYFFMNPSPAYEVTFLNKLPKELTCGAGKSSHDVANYIQRVIAATLSYECT 479
Query: 473 RFTRKDKYRALAGNDGTVVEKPFI-KPNKVMGC 504
FTRKDKYRALAGNDG VVEK I K NKVMGC
Sbjct: 480 GFTRKDKYRALAGNDGVVVEKGHILKANKVMGC 512
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357439161|ref|XP_003589857.1| ER glycerol-phosphate acyltransferase [Medicago truncatula] gi|355478905|gb|AES60108.1| ER glycerol-phosphate acyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/506 (81%), Positives = 452/506 (89%), Gaps = 4/506 (0%)
Query: 1 MAVSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLA 60
MA S FP+ V KC+SIGREKHTVVADMDGTLL GRSSFPYFAL+AFE GG+LRLL LLA
Sbjct: 1 MASSTFPT-VNKCTSIGREKHTVVADMDGTLLIGRSSFPYFALIAFEVGGVLRLLIYLLA 59
Query: 61 SPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC 120
SPIA +LYY +SESAGIQVL+FAS G++++ IESVARAVLPKFY+SDLHPE+WRVFSSC
Sbjct: 60 SPIAAILYYFISESAGIQVLVFASMAGMKLSSIESVARAVLPKFYSSDLHPETWRVFSSC 119
Query: 121 GKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180
GKRCVLTANPRIMVE FLK+FL AD+VLGTEIA+YKGRATGL+ PG+LVG+KKA L K
Sbjct: 120 GKRCVLTANPRIMVEPFLKEFLGADMVLGTEIASYKGRATGLICKPGILVGDKKAQVLKK 179
Query: 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPA 240
FG+ +P+IGLGDR TD PFMALCKEGY+VP+KP+V VT DKLPKPIIFHDGRLV+KP
Sbjct: 180 TFGDEKPDIGLGDRVTDAPFMALCKEGYIVPAKPKVTTVTSDKLPKPIIFHDGRLVQKPT 239
Query: 241 PLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAK--KST 298
PLMALLIILW PIGF LACLRIAAG+LLPM VY AF ALGVRVIVKGTPPP + K+
Sbjct: 240 PLMALLIILWIPIGFPLACLRIAAGSLLPMKFVYCAFKALGVRVIVKGTPPPPVETSKTN 299
Query: 299 GQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDAST 358
Q+GVLF+CSHRTLLDPIFLS ALGR IP VTYSVSRLSEIISPIK VRLSRDRATDA+
Sbjct: 300 HQSGVLFICSHRTLLDPIFLSTALGRAIPAVTYSVSRLSEIISPIKTVRLSRDRATDAAM 359
Query: 359 IKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG 418
IKKLL+EGDLA+CPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG
Sbjct: 360 IKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKG 419
Query: 419 MDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKD 478
MDPFYFFMNP P YEVTFLNKLP ELTCGSGK+SHEVANYIQRV+A+TLSYE T FTR+D
Sbjct: 420 MDPFYFFMNPSPVYEVTFLNKLPKELTCGSGKTSHEVANYIQRVVASTLSYECTSFTRRD 479
Query: 479 KYRALAGNDGTVVEKPFIKPNKVMGC 504
KYRALAGNDGTVVEK K NKVMGC
Sbjct: 480 KYRALAGNDGTVVEKTN-KANKVMGC 504
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533281|ref|XP_003535194.1| PREDICTED: glycerol-3-phosphate acyltransferase 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/510 (82%), Positives = 453/510 (88%), Gaps = 7/510 (1%)
Query: 1 MAVSGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLA 60
MA+S FP+ V KC+SIGRE+HTVVADMDGTLL GRSSFPYFALVAFEAGG+LRLLF +LA
Sbjct: 1 MALSTFPT-VNKCTSIGREQHTVVADMDGTLLIGRSSFPYFALVAFEAGGVLRLLFYVLA 59
Query: 61 SPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC 120
SPIA LLYY +SESAGIQVLIFAS G++V+ IESVARAVLPKFYA D+HPESWRVFSSC
Sbjct: 60 SPIAALLYYFISESAGIQVLIFASMAGIKVSSIESVARAVLPKFYAGDVHPESWRVFSSC 119
Query: 121 GKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180
GKRCVLTANPR+MVE FLK+FL AD+VLGTEIA+YKGRATGLV PG+LVG KKA+AL K
Sbjct: 120 GKRCVLTANPRVMVEPFLKEFLGADMVLGTEIASYKGRATGLVCKPGILVGKKKANALKK 179
Query: 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPA 240
AFGE +P+IGLGDRQTD PFMALCKEGY+VP K EVK+V+ DKLPKPIIFHDGRLV+KP
Sbjct: 180 AFGEEKPDIGLGDRQTDAPFMALCKEGYIVPPKLEVKSVSTDKLPKPIIFHDGRLVQKPT 239
Query: 241 PLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKS--- 297
PL+ALL ILW PI F LACLRIAAG+LLPM VYYAFWALGV VI+KGTPPP KS
Sbjct: 240 PLIALLTILWIPIAFPLACLRIAAGSLLPMHMVYYAFWALGVHVIIKGTPPPKVTKSNPN 299
Query: 298 --TGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATD 355
+GVLF+CSHRTLLDPIFLS ALGRPIP VTYSVSRLSEIISPIK VRLSRDRATD
Sbjct: 300 PNNNNSGVLFICSHRTLLDPIFLSAALGRPIPAVTYSVSRLSEIISPIKTVRLSRDRATD 359
Query: 356 ASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 415
A+ IKKLL+EGDLA+CPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG
Sbjct: 360 AAMIKKLLQEGDLAICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 419
Query: 416 WKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFT 475
WKGMDPFYFFMNP P YEVTFLNKLP ELTC GKSSH+VANYIQRVIAATLSYE T FT
Sbjct: 420 WKGMDPFYFFMNPSPTYEVTFLNKLPKELTCAIGKSSHDVANYIQRVIAATLSYECTGFT 479
Query: 476 RKDKYRALAGNDGTVVEKPFI-KPNKVMGC 504
RKDKYRALAGNDG VVEK + K NKVMGC
Sbjct: 480 RKDKYRALAGNDGVVVEKGHVLKANKVMGC 509
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449459508|ref|XP_004147488.1| PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like [Cucumis sativus] gi|449515732|ref|XP_004164902.1| PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/500 (79%), Positives = 442/500 (88%), Gaps = 5/500 (1%)
Query: 6 FPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAG 65
FP+ +++CSSIGREKHTVVADMDGTLL GRSSFPYFAL+AFEAGG+LRLLFLLLASPIAG
Sbjct: 16 FPT-IDRCSSIGREKHTVVADMDGTLLCGRSSFPYFALIAFEAGGVLRLLFLLLASPIAG 74
Query: 66 LLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCV 125
LYY +SESAGI+VLIF++F G++V+DIESVARAVLPKFYA DLH E+WRVFSSCGKRCV
Sbjct: 75 FLYYFISESAGIRVLIFSTFAGMKVSDIESVARAVLPKFYAHDLHVETWRVFSSCGKRCV 134
Query: 126 LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET 185
LTANPRIMVE FLKDFL AD+V+GTEI T RATGL++ PG++VG KA A+ + T
Sbjct: 135 LTANPRIMVEPFLKDFLGADMVIGTEIHTIGQRATGLIQSPGIIVGKNKAKAVQQI---T 191
Query: 186 QPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMAL 245
QP+IG+GDR TD PFM LCKEGY+VP+K EVK VT DKLPKPI+FHDGRLV KP P MA
Sbjct: 192 QPDIGIGDRLTDYPFMKLCKEGYVVPAKHEVKPVTVDKLPKPIVFHDGRLVVKPTPFMAF 251
Query: 246 LIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLF 305
L+ILW P+GF LACLRIAAG+LLPM VYYAFWALGVRV ++GTPPP AKKSTGQTGVLF
Sbjct: 252 LLILWIPVGFILACLRIAAGSLLPMPIVYYAFWALGVRVEIRGTPPPPAKKSTGQTGVLF 311
Query: 306 VCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEE 365
+CSHRTLLDPIFLS ALGRPIP VTYS+SRLSEIISPIK VRLSRDRA DA+ IK LL+E
Sbjct: 312 ICSHRTLLDPIFLSTALGRPIPAVTYSISRLSEIISPIKTVRLSRDRAADAAMIKNLLQE 371
Query: 366 GDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFF 425
GDLA+CPEGTTCREPFLLRFSALFAELTDE+VPVAM NRMSMFHGTTARGWKGMDPFYFF
Sbjct: 372 GDLAICPEGTTCREPFLLRFSALFAELTDEIVPVAMSNRMSMFHGTTARGWKGMDPFYFF 431
Query: 426 MNPCPAYEVTFLNKLPMELTCGSG-KSSHEVANYIQRVIAATLSYESTRFTRKDKYRALA 484
MNP P YEVTFLNKLP ELTCG G KSSHEVANYIQR+IAATLSY+ T FTRKDKYRALA
Sbjct: 432 MNPSPVYEVTFLNKLPYELTCGGGEKSSHEVANYIQRMIAATLSYKCTNFTRKDKYRALA 491
Query: 485 GNDGTVVEKPFIKPNKVMGC 504
GNDG V EK ++ K+MGC
Sbjct: 492 GNDGIVPEKSKVQSTKIMGC 511
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 504 | ||||||
| TAIR|locus:2042947 | 501 | GPAT6 "GLYCEROL-3-PHOSPHATE sn | 0.954 | 0.960 | 0.540 | 4.9e-140 | |
| TAIR|locus:2126101 | 500 | GPAT8 "GLYCEROL-3-PHOSPHATE sn | 0.952 | 0.96 | 0.532 | 1e-130 | |
| TAIR|locus:2025381 | 503 | GPAT4 "GLYCEROL-3-PHOSPHATE sn | 0.952 | 0.954 | 0.529 | 2.8e-130 | |
| TAIR|locus:2080687 | 502 | GPAT5 "GLYCEROL-3-PHOSPHATE sn | 0.926 | 0.930 | 0.533 | 2.6e-127 | |
| TAIR|locus:2152825 | 500 | GPAT7 "GLYCEROL-3-PHOSPHATE sn | 0.936 | 0.944 | 0.521 | 1.9e-124 | |
| TAIR|locus:2009225 | 585 | GPAT1 "GLYCEROL-3-PHOSPHATE sn | 0.938 | 0.808 | 0.434 | 4.9e-101 | |
| TAIR|locus:2204818 | 530 | GPAT2 "GLYCEROL-3-PHOSPHATE sn | 0.942 | 0.896 | 0.378 | 3.1e-83 | |
| TAIR|locus:2141410 | 520 | GPAT3 "GLYCEROL-3-PHOSPHATE sn | 0.942 | 0.913 | 0.393 | 3.9e-83 | |
| ZFIN|ZDB-GENE-030131-3375 | 423 | aup1 "ancient ubiquitous prote | 0.448 | 0.534 | 0.272 | 7.9e-06 |
| TAIR|locus:2042947 GPAT6 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 264/488 (54%), Positives = 339/488 (69%)
Query: 10 VEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXXXXYY 69
+ KC R HTV AD+DGTLL RS+FPY+ LVA E Y
Sbjct: 13 ISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYLTYL 72
Query: 70 LVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTAN 129
+SE+ I V +F +F GL++ D+E V R+VLP+FYA D+ P++WR+F++ GKR ++TA+
Sbjct: 73 TISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYIITAS 132
Query: 130 PRIMVEAFLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFG---ET 185
PRIMVE F+K FL D VLGTE+ K GRATG R PG+LVG K D +L+ FG
Sbjct: 133 PRIMVEPFVKTFLGVDKVLGTELEVSKSGRATGFTRKPGILVGQYKRDVVLREFGGLASD 192
Query: 186 QPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMAL 245
P++GLGD +TD FM++CKEGY+VP + + + + +KL PIIFH+GRLV++P PL+AL
Sbjct: 193 LPDLGLGDSKTDHDFMSICKEGYMVP-RTKCEPLPRNKLLSPIIFHEGRLVQRPTPLVAL 251
Query: 246 LIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLF 305
L LW P+GF L+ +R+ LP Y + G++++V G PPP K GQ G L
Sbjct: 252 LTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKP--GQPGHLL 309
Query: 306 VCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEE 365
VC+HRT+LDP+ +VALGR I VTYS+S+ SE+ISPIKAV L+R R DA+ IK+LLEE
Sbjct: 310 VCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLLEE 369
Query: 366 GDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFF 425
GDL +CPEGTTCREPFLLRFSALFAELTD +VPVA+ + SMF+GTT RG+K +DP++ F
Sbjct: 370 GDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPYFAF 429
Query: 426 MNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAG 485
MNP P YE+TFL ++P ELTC GKS EVANYIQRV+ TL +E T FTRKDKY LAG
Sbjct: 430 MNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYAMLAG 489
Query: 486 NDGTVVEK 493
DG V K
Sbjct: 490 TDGRVPVK 497
|
|
| TAIR|locus:2126101 GPAT8 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 260/488 (53%), Positives = 332/488 (68%)
Query: 6 FPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXX 65
FP E C G E ++ AD+DGTLL RSSFPYF LVA E
Sbjct: 10 FPPITE-CRD-G-EYDSIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPFVI 66
Query: 66 XXYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCV 125
Y VSES GIQ+LIF SF GL++ DIE V+RAVLP+FYA+D+ +S+ VF C ++ V
Sbjct: 67 ISYLFVSESLGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRKVV 126
Query: 126 LTANPRIMVEAFLKDFLAADLVLGTEIATYK--GRATGLVRDPGVLVGNKKADALLKAFG 183
+TANP +MVEAF+KD+L D VLGTEI RATG V+ PGVLVG+ K A+LK FG
Sbjct: 127 VTANPIVMVEAFVKDYLGGDKVLGTEIEVNPKTNRATGFVKKPGVLVGDLKRLAILKEFG 186
Query: 184 ETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLM 243
P++GLGDR +D FM+LCK+GY+V + + ++L I+FHDGRL ++P PL
Sbjct: 187 NESPDLGLGDRTSDHDFMSLCKKGYMVHATKSATTIPKERLKNRIVFHDGRLAQRPTPLN 246
Query: 244 ALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGV 303
A++ LW P GF L+ +R+ LP V Y + LG+ + ++G PP S G G
Sbjct: 247 AIITYLWLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPP--SPGTLGN 304
Query: 304 LFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLL 363
L+V +HRT LDPI +++ALGR I VTYSVSRLS ++SPI AV L+RDRATDA+ ++KLL
Sbjct: 305 LYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLL 364
Query: 364 EEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423
E+GDL +CPEGTTCRE +LLRFSALFAEL+D +VPVAM + MF+GTT RG K DP++
Sbjct: 365 EKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYF 424
Query: 424 FFMNPCPAYEVTFLNKLPMELTC-GSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRA 482
FFMNP P+YE TFL++LP E+T G GK+ EVANY+Q+VI A L +E T TRKDKY
Sbjct: 425 FFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKDKYLL 484
Query: 483 LAGNDGTV 490
L GNDG V
Sbjct: 485 LGGNDGKV 492
|
|
| TAIR|locus:2025381 GPAT4 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
Identities = 259/489 (52%), Positives = 331/489 (67%)
Query: 6 FPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXX 65
FP + +C S RE ++ AD+DGTLL RSSFPYF LVA E
Sbjct: 10 FPP-ISECKS--REYDSIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPIVI 66
Query: 66 XXYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKR-C 124
Y VSES GIQ+LIF SF G+++ +IE V+RAVL +FYA+D+ +S+ VF C KR
Sbjct: 67 IAYLFVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKRKV 126
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYKG--RATGLVRDPGVLVGNKKADALLKAF 182
V+TANP +MVE F+KD+L D VLGTEI +ATG V+ PGVLVG+ K A+LK F
Sbjct: 127 VVTANPIVMVEPFVKDYLGGDKVLGTEIEVNPKTMKATGFVKKPGVLVGDLKRLAILKEF 186
Query: 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPL 242
G+ P++GLGDR +D FM++CKEGY+V V + L IIFHDGRLV++P PL
Sbjct: 187 GDDSPDLGLGDRTSDHDFMSICKEGYMVHETKSATTVPIESLKNRIIFHDGRLVQRPTPL 246
Query: 243 MALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTG 302
AL+I LW P GF L+ R+ LP V Y + LG+ + ++G PP S G+ G
Sbjct: 247 NALIIYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPP--SPGKPG 304
Query: 303 VLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKL 362
L+V +HRT LDPI +++ALGR I VTYSVSRLS ++SPI AV L+RDR DA+ +++L
Sbjct: 305 NLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQL 364
Query: 363 LEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422
LE+GDL +CPEGTTCREP+LLRFSALFAEL+D +VPVAM + MF+GTT RG K DP+
Sbjct: 365 LEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPY 424
Query: 423 YFFMNPCPAYEVTFLNKLPMELTC-GSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYR 481
+FFMNP P+YE TFL++LP E+T G GK+ EVANY+Q+VI L +E T TRKDKY
Sbjct: 425 FFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRKDKYL 484
Query: 482 ALAGNDGTV 490
L GNDG V
Sbjct: 485 LLGGNDGKV 493
|
|
| TAIR|locus:2080687 GPAT5 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
Identities = 257/482 (53%), Positives = 323/482 (67%)
Query: 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXXXXYYLVSESAG 76
G ++VV++ +GT+L+ SF YF LVAFE ++A
Sbjct: 7 GTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAA 66
Query: 77 IQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEA 136
+++ IF + VGLR +IESVARAVLPKFY D+ ++WRVFSSC KR V+T PR+MVE
Sbjct: 67 LKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVER 126
Query: 137 FLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQ 195
F K+ L AD V+GTE+ + G TGL+R+ V + + F +P++GLG
Sbjct: 127 FAKEHLRADEVIGTELIVNRFGFVTGLIRETDV--DQSALNRVANLFVGRRPQLGLGKPA 184
Query: 196 --TDIPFMALCKEGYLVPSKPEVKAVTCDKL---PKPIIFHDGRLVRKPAPLMALLIILW 250
F++LC+E P PE +L P P+IFHDGRLV++P P AL+I+LW
Sbjct: 185 LTASTNFLSLCEEHIHAPI-PENYNHGDQQLQLRPLPVIFHDGRLVKRPTPATALIILLW 243
Query: 251 TPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPP--PAAKKSTGQTGVLFVCS 308
P G LA +RI GA+LP+ Y G +IVKG PP PAA G++GVLFVC+
Sbjct: 244 IPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPAA----GKSGVLFVCT 299
Query: 309 HRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDL 368
HRTL+DP+ LS LGR IP VTYS+SRLSEI+SPI VRL+R R DA+ IK+ L +GDL
Sbjct: 300 HRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDL 359
Query: 369 AMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNP 428
+CPEGTTCREPFLLRFSALFAELTD +VPVAM R+ FH TTARGWKG+DP +FFMNP
Sbjct: 360 VVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNP 419
Query: 429 CPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDG 488
P YE+TFLN+LPME TC SGKS H+VANY+QR++AATL +E T FTRKDKYR LAGNDG
Sbjct: 420 RPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479
Query: 489 TV 490
TV
Sbjct: 480 TV 481
|
|
| TAIR|locus:2152825 GPAT7 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 251/481 (52%), Positives = 318/481 (66%)
Query: 21 HTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXXXXYYLVSESAGIQVL 80
++VV++++GTLL+ F YF LVAFE L + ++++
Sbjct: 9 YSVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLM 68
Query: 81 IFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKD 140
IF + GL ++IESVARAVLPKF+ D+ ++WR F SC KR V+T PR+MVE F KD
Sbjct: 69 IFVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKD 128
Query: 141 FLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQ-TDI 198
L+AD V+GTEI + G ATGL+++ V +++ F + +P++GLG +D
Sbjct: 129 HLSADEVIGTEIVVNRFGYATGLIQETNV--DQSVFNSVANLFVDRRPQLGLGRHIISDS 186
Query: 199 P-FMALCKEGYL--VPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLIILWTPIGF 255
P F++LC+E VPS P P+IFHDGRLV+ P P AL+I+LW P G
Sbjct: 187 PTFLSLCEEQVHAPVPSNYNGHNQRLHVQPLPVIFHDGRLVKLPTPATALIILLWIPFGI 246
Query: 256 FLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDP 315
LA +RI G LLP+ + Y R IVKG PP A+ +TG GVLFVC+HRTL+DP
Sbjct: 247 ILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPP--AQATTGNPGVLFVCTHRTLMDP 304
Query: 316 IFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGT 375
+ LS LGR IP VTYS+SRLSEI+SPI RL+R R DA IKK L GDL + PEGT
Sbjct: 305 VVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGT 364
Query: 376 TCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVT 435
TCREPFLLRFSALFAELTD +VPVAM R+ FH TTARGWKG+DP +FFMNP P YEVT
Sbjct: 365 TCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVT 424
Query: 436 FLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVVEKPF 495
FLN+L +E TC SGKS ++VANY+QR++AATL +E T FTRKDKYR LAGNDGTV F
Sbjct: 425 FLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYLSF 484
Query: 496 I 496
+
Sbjct: 485 L 485
|
|
| TAIR|locus:2009225 GPAT1 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 215/495 (43%), Positives = 302/495 (61%)
Query: 13 CS-SIGREKHTVVADMDGTLLRGRSS------FPYFALVAFEXXXXXXXXXXXXXXXXXX 65
CS S + T D+DG LLR SS FPYF LVAFE
Sbjct: 95 CSVSSDHYRDTFFCDIDGVLLRQHSSKHFHTFFPYFMLVAFEGGSIIRAILLLLSCSFL- 153
Query: 66 XXYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCG-KRC 124
+ + + ++VL F +F GLRV D+++V+R+VLPKF+ +L+ + + +++ +
Sbjct: 154 ---WTLQQETKLRVLSFITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKV 210
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYK--GRA--TGLVRDPGVLVGNKKADALLK 180
V T+ P+++VE FL++ L AD V+GT++ K GR TGL G ++ +K A+
Sbjct: 211 VFTSLPQVLVERFLREHLNADDVIGTKLQEIKVMGRKFYTGLASGSGFVLKHKSAEDYFF 270
Query: 181 AFGETQPEIGLGDRQT--DIPFMALCKEGYL---VPSKPEVKAVTCDKLPKPIIFHDGRL 235
+ +P +G+G + D F+++CKE Y S + A+ ++ PKP+IFHDGRL
Sbjct: 271 D-SKKKPALGIGSSSSPQDHIFISICKEAYFWNEEESMSKNNALPRERYPKPLIFHDGRL 329
Query: 236 VRKPAPLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAK 295
P PL L + +W PIGF LA RI+ G LP + GVR+ K +
Sbjct: 330 AFLPTPLATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGR 389
Query: 296 KSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATD 355
G +GVL+VC+HRTLLDP+FL+ +LG+P+ VTYS+S+ SE I+P+K V L RDR D
Sbjct: 390 PEKGNSGVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKD 449
Query: 356 ASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 415
+++LL +GDL +CPEGTTCREP+LLRFS LFAELT+++VPVA+ R+SMF+GTTA G
Sbjct: 450 GEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASG 509
Query: 416 WKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFT 475
K +DP +F MNP P Y + L KLP E+TC GKSS EVAN+IQ +A L +E T T
Sbjct: 510 LKCLDPIFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLT 569
Query: 476 RKDKYRALAGNDGTV 490
R+DKY LAGN+G V
Sbjct: 570 RRDKYLVLAGNEGIV 584
|
|
| TAIR|locus:2204818 GPAT2 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 191/504 (37%), Positives = 287/504 (56%)
Query: 11 EKCSSIGREK------HTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXX 64
+KC S G + HT++ +++G LL+ S FPYF +VAFE
Sbjct: 35 QKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLLVLYPFI 94
Query: 65 XXXYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRC 124
L+S G++ ++ SF G++ V ++VLPK++ D+ E ++V GKR
Sbjct: 95 S----LMSYEMGLKTMVMLSFFGVKKESFR-VGKSVLPKYFLEDVGLEMFQVLKRGGKRV 149
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVL-VGNKKADALLKAFG 183
++ P++M++ FL+D+L ++V+G ++ G G+V D L + K + G
Sbjct: 150 AVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIVEDKKNLEIAFDKV-VQEERLG 208
Query: 184 ETQPEIGLGDRQTDIP---FMALCKEGYLVPS--KPEVKAVTCDKLPKPIIFHDGRLVRK 238
+ IG+ + F C+E Y V + K + + D+ PKP+IFHDGRL K
Sbjct: 209 SGRRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPQDQYPKPLIFHDGRLAVK 268
Query: 239 PAPLMALLIILWTPIGFFLACLRIAAGALLPMSTV--YYAFWALGVRVIVKGTPPPAAKK 296
P PL L++ +W P LA R+ G LP S + AF + + + V +
Sbjct: 269 PTPLNTLVLFMWAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNNHNDLIS-- 326
Query: 297 STGQTGVLFVCSHRTLLDPIFLSVALGRP-IPTVTYSVSRLSEIISPIKAVRLSRDRATD 355
+ + G LFVC+HRTLLDP+++S AL + + VTYS+SRLSE+++PIK VRL+RDR D
Sbjct: 327 ADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKD 386
Query: 356 ASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARG 415
++KLL +GDL +CPEGTTCREP+LLRFS LF+E+ D +VPVA+ + ++ F+GTTA G
Sbjct: 387 GQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASG 446
Query: 416 WKGMDPFYFFMNPCPAYEVTFLNKLP--MELTC-G---SGKSSHEVANYIQRVIAATLSY 469
K DP +F +NP P+Y V L+ + TC G +GK + EVAN++Q I L +
Sbjct: 447 LKAFDPIFFLLNPFPSYTVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQHEIGNALGF 506
Query: 470 ESTRFTRKDKYRALAGNDGTVVEK 493
E T TR+DKY LAGN+G V +K
Sbjct: 507 ECTNLTRRDKYLILAGNNGVVKKK 530
|
|
| TAIR|locus:2141410 GPAT3 "GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 196/498 (39%), Positives = 283/498 (56%)
Query: 7 PSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEXXXXXXXXXXXXXXXXXXX 66
PSS+ + S + R HT++ +++G LL+ S FPYF LVAFE
Sbjct: 34 PSSLLQ-SDLSR--HTLIFNVEGALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLIS- 89
Query: 67 XYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVL 126
L+S G++V++ SF G++ + RAVLPK++ D+ E + V GK+ +
Sbjct: 90 ---LMSHEMGVKVMVMVSFFGIKKEGFRA-GRAVLPKYFLEDVGLEMFEVLKRGGKKIGV 145
Query: 127 TAN-PRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL-KAFGE 184
+ + P++M+E FL+D+L D+V+G E+ G G++ D + D L+ K
Sbjct: 146 SDDLPQVMIEGFLRDYLEIDVVVGREMKVVGGYYLGIMEDK--TKHDLVFDELVRKERLN 203
Query: 185 TQPEIGLGDRQTDIP---FMALCKEGYLVPS--KPEVKAVTCDKLPKPIIFHDGRLVRKP 239
T IG+ T + F C+E Y V K + + + PKP+IFHDGRL KP
Sbjct: 204 TGRVIGITSFNTSLHRYLFSQFCQEIYFVKKSDKRSWQTLPRSQYPKPLIFHDGRLAIKP 263
Query: 240 APLMALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTG 299
+ L++ +W P A R+ +P S G R+ V + K+
Sbjct: 264 TLMNTLVLFMWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPS 323
Query: 300 QT-GVLFVCSHRTLLDPIFLSVALGRP-IPTVTYSVSRLSEIISPIKAVRLSRDRATDAS 357
Q G LFVC+HRTLLDP++++ AL + I TVTYS+SR+SEI++PIK VRL+RDR +D
Sbjct: 324 QRKGCLFVCNHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQ 383
Query: 358 TIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWK 417
++KLL EGDL +CPEGTTCREP+LLRFS LF E++D +VPVA+ ++ F+GTTA G K
Sbjct: 384 AMEKLLTEGDLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLK 443
Query: 418 GMDPFYFFMNPCPAYEVTFLNKLPMELTCGS--GKSSHEVANYIQRVIAATLSYESTRFT 475
+DP +F ++P P Y + FL+ + TC GK EVAN +Q I L +E T T
Sbjct: 444 ALDPLFFLLDPYPTYTIQFLDPVS-GATCQDPDGKLKFEVANNVQSDIGKALDFECTSLT 502
Query: 476 RKDKYRALAGNDGTVVEK 493
RKDKY LAGN+G VV+K
Sbjct: 503 RKDKYLILAGNNG-VVKK 519
|
|
| ZFIN|ZDB-GENE-030131-3375 aup1 "ancient ubiquitous protein 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 68/250 (27%), Positives = 106/250 (42%)
Query: 245 LLIILWTPIGFFLACLRIAAGA-------LLPMSTVYYAFWALGVRVI---VKGTPPPAA 294
LL++L+ P+GF L LRI G LP S V + V+ V+ P
Sbjct: 23 LLLLLYAPVGFCLMLLRIFIGVHVFLVSCALPDSIVRRFIVRIMCSVLGLHVQQNSPRLR 82
Query: 295 KKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRAT 354
K+T L+VC+H T D +++ P + V L ++ + R
Sbjct: 83 DKTTR----LYVCNHVTHFDHNIINLLTSCNTPLLEGPVGFLCWARGFMELGQGVGSRTE 138
Query: 355 DASTIKKLLEEGD---LAMCPE-GTTCREPFLLRFSALFAELTDELVPVAM-VNRMSMFH 409
T+ + D L + PE TT LL+FS+ ++D + PVA+ V R +
Sbjct: 139 LTETLHRYCSSPDTLPLLLFPEEDTTNGRTGLLKFSSWPFSVSDSIQPVALLVKRPFIAV 198
Query: 410 GTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSY 469
T W + FF+ P Y V +L L E G++ E A+ +Q ++A L
Sbjct: 199 STPESSWLTELLWTFFV-PFTVYHVRWLPPLSKE----DGETHQEFASKVQGLLATELGV 253
Query: 470 ESTRFTRKDK 479
ST+ T+ DK
Sbjct: 254 ISTQITKADK 263
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 504 484 0.00080 119 3 11 22 0.48 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 612 (65 KB)
Total size of DFA: 264 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.16u 0.11s 38.27t Elapsed: 00:00:02
Total cpu time: 38.16u 0.11s 38.27t Elapsed: 00:00:02
Start: Fri May 10 23:07:33 2013 End: Fri May 10 23:07:35 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O80437 | GPAT6_ARATH | 2, ., 3, ., 1, ., 1, 5 | 0.5523 | 0.9523 | 0.9580 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_XVI000515 | hypothetical protein (501 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 504 | |||
| PLN02177 | 497 | PLN02177, PLN02177, glycerol-3-phosphate acyltrans | 0.0 | |
| PLN02499 | 498 | PLN02499, PLN02499, glycerol-3-phosphate acyltrans | 0.0 | |
| PLN02588 | 525 | PLN02588, PLN02588, glycerol-3-phosphate acyltrans | 1e-120 | |
| cd06551 | 187 | cd06551, LPLAT, Lysophospholipid acyltransferases | 3e-22 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 5e-13 | |
| smart00563 | 118 | smart00563, PlsC, Phosphate acyltransferases | 2e-11 | |
| TIGR01490 | 202 | TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfami | 5e-10 | |
| cd07989 | 184 | cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr | 1e-09 | |
| pfam01553 | 131 | pfam01553, Acyltransferase, Acyltransferase | 1e-08 | |
| COG0204 | 255 | COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl | 2e-06 | |
| cd07991 | 211 | cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt | 1e-05 | |
| TIGR00530 | 130 | TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp | 6e-04 | |
| TIGR01488 | 177 | TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf | 0.003 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 0.004 |
| >gnl|CDD|215118 PLN02177, PLN02177, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 650 bits (1679), Expect = 0.0
Identities = 296/485 (61%), Positives = 366/485 (75%), Gaps = 4/485 (0%)
Query: 10 VEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYY 69
+ KCSS GR TV AD+DGTLL RS+FPY+ LVA EAG +LR L LLL+ P Y
Sbjct: 12 ISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYL 71
Query: 70 LVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTAN 129
+SES I+ +F +F GL++ DIE V+R+VLPKFYA D+HPE+WRVF+S GKR ++TA+
Sbjct: 72 FISESLAIKTFVFIAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITAS 131
Query: 130 PRIMVEAFLKDFLAADLVLGTEI-ATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPE 188
PRIMVE F+K FL AD VLGTE+ + GRATG ++ PGVLVG+ K DA+LK FG+ P+
Sbjct: 132 PRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD 191
Query: 189 IGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLII 248
+GLGDR+TD FM++CKEGY+VP + + + +KL P+IFH+GRLV++P PL+ALL
Sbjct: 192 LGLGDRETDHDFMSICKEGYMVPRT-KCEPLPRNKLLSPVIFHEGRLVQRPTPLVALLTF 250
Query: 249 LWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCS 308
LW PIGF L+ LR+ LP Y + LG+R+IVKG PPP KK GQ GVLFVC+
Sbjct: 251 LWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPKK--GQPGVLFVCN 308
Query: 309 HRTLLDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDL 368
HRT+LDP+ +VALGR I VTYS+S+ SE+ISPIKAV LSR+R DA+ IK+LLEEGDL
Sbjct: 309 HRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDL 368
Query: 369 AMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNP 428
+CPEGTTCREPFLLRFSALFAELTD +VPVA+ + SMFHGTT RG+K +DP++ FMNP
Sbjct: 369 VICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFHGTTVRGYKLLDPYFVFMNP 428
Query: 429 CPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDG 488
P YE+TFLN+LP ELTC GKS EVANYIQRV+A TL +E T TRKDKY LAG DG
Sbjct: 429 RPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTRKDKYAILAGTDG 488
Query: 489 TVVEK 493
V K
Sbjct: 489 RVPSK 493
|
Length = 497 |
| >gnl|CDD|178115 PLN02499, PLN02499, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 594 bits (1533), Expect = 0.0
Identities = 267/484 (55%), Positives = 335/484 (69%), Gaps = 9/484 (1%)
Query: 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG 76
G ++VV++++GTLL+ F YF LVAFEA G++R LL PI LL L A
Sbjct: 5 GTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAA 64
Query: 77 IQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEA 136
++++IF + G+ ++IESVARAVLPKFY D+ E+W+VFSSC KR V+T PR+MVE
Sbjct: 65 LKLMIFVATAGVHESEIESVARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVER 124
Query: 137 FLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQ 195
F K+ L AD V+G+E+ + G ATG +R G V A+ + F + +P++GLG
Sbjct: 125 FAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVDERPQLGLGRIS 182
Query: 196 TDIPFMALCKEGYLVPSKPEVKAVTCDKL---PKPIIFHDGRLVRKPAPLMALLIILWTP 252
F++LCKE + P P + P P+IFHDGRLV++P P ALLI+LW P
Sbjct: 183 ASSSFLSLCKE-QIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILLWIP 241
Query: 253 IGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTL 312
+G LA +RI G +LPM + Y G +VIVKG PPP A S G +GVLFVC+HRTL
Sbjct: 242 LGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPA--SGGNSGVLFVCTHRTL 299
Query: 313 LDPIFLSVALGRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCP 372
+DP+ LS LGR IP VTYS+SRLSEI+SPI VRL+R R DA IK+ L GDL +CP
Sbjct: 300 MDPVVLSTVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCP 359
Query: 373 EGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAY 432
EGTTCREPFLLRFSALFAELTD +VPVAM R+ FH TTARGWKG+DP +FFMNP P Y
Sbjct: 360 EGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVY 419
Query: 433 EVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVVE 492
EVTFLN+LP+E TC SGKS H+VANY+QR++AATL +E T FTRKDKYR LAGNDGTV
Sbjct: 420 EVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSY 479
Query: 493 KPFI 496
F+
Sbjct: 480 LSFL 483
|
Length = 498 |
| >gnl|CDD|215320 PLN02588, PLN02588, glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-120
Identities = 202/507 (39%), Positives = 296/507 (58%), Gaps = 40/507 (7%)
Query: 11 EKCSSIGREK------HTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIA 64
+KC S G + HT++ +++G LL+ S FPYF +VAFEAGG++R LFL + P
Sbjct: 35 QKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLYPFI 94
Query: 65 GLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRC 124
L+ Y G++ ++ SF G++ +AVLPK++ D+ E ++V GKR
Sbjct: 95 SLMSY----EMGLKTMVMLSFFGVKKESFR-AGKAVLPKYFLEDVGLEMFQVLKRGGKRV 149
Query: 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKAD-ALLKAFG 183
++ P++M++ FL+D+L ++V+G ++ G G++ D KK + A K
Sbjct: 150 GVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMED------KKKHELAFDKVVQ 203
Query: 184 ETQPEIG--LGDRQTDIP-----FMALCKEGYLV--PSKPEVKAVTCDKLPKPIIFHDGR 234
E + G +G + P F C+E Y V K + + D+ PKP+IFHDGR
Sbjct: 204 EERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGR 263
Query: 235 LVRKPAPLMALLIILWTPIGFFLACLRIAAGALLP--MSTVYYAFWALGVRVIVKGTPPP 292
L KP PL L++ +W P LA R+ G LP ++ + AF + + + V
Sbjct: 264 LAIKPTPLNTLVLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISS 323
Query: 293 AAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP-IPTVTYSVSRLSEIISPIKAVRLSRD 351
KK G LFVC+HRTLLDP+++S AL + I VTYS+SRLSE+++PIK VRL+RD
Sbjct: 324 DRKK-----GCLFVCNHRTLLDPLYISYALRKKNIKAVTYSLSRLSELLAPIKTVRLTRD 378
Query: 352 RATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGT 411
R D ++KLL +GDL +CPEGTTCREP+LLRFS LF+E+ D +VPVA+ + ++ F+GT
Sbjct: 379 RVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGT 438
Query: 412 TARGWKGMDPFYFFMNPCPAYEVTFLNKL--PMELTC---GSGKSSHEVANYIQRVIAAT 466
TA G K DP +F +NP P+Y V L+ + TC +GK EVAN++Q I
Sbjct: 439 TASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNA 498
Query: 467 LSYESTRFTRKDKYRALAGNDGTVVEK 493
L +E T TR+DKY LAGN+G V +K
Sbjct: 499 LGFECTNLTRRDKYLILAGNNGVVKKK 525
|
Length = 525 |
| >gnl|CDD|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 3e-22
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 39/201 (19%)
Query: 280 LGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPT-VTYSVSRLS- 337
VR+ VKG PPP G VLFV +H + D + L + L R + V +
Sbjct: 10 GFVRLEVKGPPPPP-----GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELL 64
Query: 338 ---EIISPIKAVRLSRDRATDAST----IKKLLEEGD--LAMCPEGTTCREP-FLLRFSA 387
+ + A + RD A+ + +LL + + + PEGT R L+F
Sbjct: 65 ERYPFFTRLGAFSVDRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKP 124
Query: 388 LFAELTDE----LVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPME 443
A L ++ +VPVA+ +F + + P Y T L +
Sbjct: 125 GVAHLAEKAGVPIVPVALRYTFELFEQF--------PEIFVRIGPPIPYAETALGE---- 172
Query: 444 LTCGSGKSSHEVANYIQRVIA 464
+ + E+AN + R++
Sbjct: 173 ------ELAAELANRLTRLLD 187
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and Tafazzin (the protein product of the Barth syndrome (TAZ) gene). Length = 187 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 5e-13
Identities = 49/203 (24%), Positives = 77/203 (37%), Gaps = 22/203 (10%)
Query: 23 VVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIF 82
V D+DGTL+ A A +L + + ES ++V
Sbjct: 8 AVFDLDGTLINA-ELIDELARGAGVGEEVLAITERAMRG------ELDFEESLRLRV--- 57
Query: 83 ASFVGLRVTDIESVARAVLPKF-YASDLHPESWRVFSSCGKRCVL-TANPRIMVEAFLKD 140
A GL V +E V L A +L + G + V+ + +VE + +
Sbjct: 58 ALLKGLPVEVLEEVREEFLRLTPGAEEL----VAALKAAGAKVVIISGGFTFLVEP-IAE 112
Query: 141 FLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE--TQPE--IGLGDRQT 196
L D V+ E+ G+ TG V P + G KA AL + E E + GD
Sbjct: 113 RLGIDYVVANELEIDDGKLTGRVVGP-ICDGEGKAKALRELAAELGIPLEETVAYGDSAN 171
Query: 197 DIPFMALCKEGYLVPSKPEVKAV 219
D+P + V KP+++A+
Sbjct: 172 DLPMLEAAGLPIAVNPKPKLRAL 194
|
Length = 212 |
| >gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 2e-11
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 303 VLFVCSHRTLLDPIFLSVALGRPIPTVTYSVSR-------LSEIISPIKAVRLSRDRATD 355
L V +H++ LDP+ LS L R + V + + L ++ + A+ + R
Sbjct: 1 ALVVANHQSFLDPLVLSALLPRKLGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRSNGRK 60
Query: 356 AS----TIKKLLEEGD-LAMCPEGTTCREPFLLRFSALFAELTDE----LVPVAMVN 403
A +LL+EG+ L + PEGT R LL F A L E +VPVA+
Sbjct: 61 ARAALREAVELLKEGEWLLIFPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. Length = 118 |
| >gnl|CDD|233436 TIGR01490, HAD-SF-IB-hyp1, HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 5e-10
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 26 DMDGTLLRGRSSFPYFALVAFEAGGILRLLFLL--LASPIAGLLYYLVSESAGIQVLIFA 83
D DGTL + F + + L L LA L L + + A
Sbjct: 5 DFDGTLTAKDTLFIFLKF-LASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDA 63
Query: 84 SFVGLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRCVL-TANPRIMVEAFLK 139
GL D+ ++ + + S L+PE+ R + G VL +A+ I+V+ +
Sbjct: 64 -LAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR 122
Query: 140 DFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPEIGL----GDR 194
L D +GT + + G TG + G K AL + E Q ++ GD
Sbjct: 123 -ILGIDNAIGTRLEESEDGIYTGNIDGN-NCKGEGKVHALAELLAEEQIDLKDSYAYGDS 180
Query: 195 QTDIPFMALCKEGYLV 210
+D+P ++L Y+V
Sbjct: 181 ISDLPLLSLVGHPYVV 196
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in This model possess PSPase activity. OMNI|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog [Unknown function, Enzymes of unknown specificity]. Length = 202 |
| >gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 30/197 (15%)
Query: 277 FWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPI-PTVTYSVSR 335
LGVRV V+G K V+ V +H++ LDP+ L AL RPI + +
Sbjct: 5 LRLLGVRVRVEGLENLPPKG-----PVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFK 59
Query: 336 ---LSEIISPIKAVRLSRDRATDA----STIKKLLEEGD-LAMCPEGTTCREPFLLRF-- 385
L ++ + A+ + R A + L+EG+ + + PEGT R+ LL F
Sbjct: 60 IPFLGWLLRLLGAIPIDRGNGRSAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKS 119
Query: 386 -SALFAELTD-ELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPME 443
+ A+ +VPVA+ W + P V +P E
Sbjct: 120 GAFRLAKEAGVPIVPVAISG-----------TWGSLPKGKKLPRPGRV-TVRIGEPIPPE 167
Query: 444 LTCGSGKSSHEVANYIQ 460
+ + E+ ++
Sbjct: 168 GLELAEEDRKELREKVR 184
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184 |
| >gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 1e-08
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 302 GVLFVCSHRTLLDPIFLSVALGRPIPTVTY-------SVSRLSEIISPIKAVRLSRDRAT 354
+ V +H++ LDP+ LS+ L + + + ++ L ++ + + + R A
Sbjct: 15 PAIVVANHQSYLDPLLLSLLLPKRGRPLVFVAKDELLNLPLLGWLMRLLGCIFIDRKNAK 74
Query: 355 DA----STIKKLLEEGDL-AMCPEGTTCREPFLLRFSA----LFAELTDELVPVAMV 402
DA + +LL EG+L + PEGT R LL F L E +VPVA+
Sbjct: 75 DAANTLEYLVELLREGELVLIFPEGTRSRGGELLPFKKGAFRLAREAGVPIVPVAIS 131
|
This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene. Length = 131 |
| >gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 242 LMALLIILWTPIGFFLACLRIAAGALL---PMSTVYYAFWALGVRVIVKGTPPPAAKKST 298
L+ +++ L P+ L L +L V G+RV V+G +
Sbjct: 7 LILVILFLLLPLPLALIALFRLRRPVLRRWLRFLVLLLLLLFGLRVEVEG-----LENLP 61
Query: 299 GQTGVLFVCSHRTLLDPIFLSVALGRPIPTVT------YSVSRLSEIISPIKAVRLSRDR 352
L V +H++ LDP+ LS+AL R P + V L ++ + A+ + R+
Sbjct: 62 KGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLGAIPVDREN 121
Query: 353 ATDAST---IKKLLEEGD-LAMCPEGT-TCREPFLLRF---SALFAELTDE-LVPVAMVN 403
D + + +L G L + PEGT + LL F +A A +VPVA+V
Sbjct: 122 PDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVG 181
Query: 404 RMSMF 408
+F
Sbjct: 182 AEELF 186
|
Length = 255 |
| >gnl|CDD|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 34/228 (14%)
Query: 270 MSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTV 329
+ +AF + V G P P + + V +H + +DP+ L L P++
Sbjct: 1 ARVLLFAFG--FYVIKVHGKPDPP------EAPRIIVANHTSFIDPLILFSDLF---PSI 49
Query: 330 TYSVSR-----LSEIISPIKAVRLSRDRATD-ASTIKKLLEEGD------LAMCPEGTTC 377
+ I+ + + + R D ++++ E + + PEGTT
Sbjct: 50 VAKKELGKLPFIGTILRALGCIFVDRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTT 109
Query: 378 REPFLLRFSALFAELTDELV-PVAM-VNRMSMFHGTTARGWKGMDPFYFFMNPC-PAY-- 432
L+ F A V PVA+ + + G+ + + + PA
Sbjct: 110 NGKALIMFK-KGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYLFRLL--TQPANVL 166
Query: 433 EVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKY 480
EV FL + G+ E AN ++ ++A L +T +T +DK
Sbjct: 167 EVEFLP--VYTPS-EEGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211 |
| >gnl|CDD|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVT----YSVSRL 336
G++V V G AK VL V +H++ LDP+ LS A PI + +
Sbjct: 1 GLKVEVVGPENLPAKS-----PVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFF 55
Query: 337 SEIISPIKAVRLSRDRATDASTI----KKLLEEG-DLAMCPEGTTCREPFLLRF 385
++ A+ + R+ +T ++L++G + + PEGT R +L F
Sbjct: 56 GIMLWLTGAIFIDRENIRAIATALKAAIEVLKQGRSIGVFPEGTRSRGRDILPF 109
|
This model describes the core homologous region of a collection of related proteins, several of which are known to act as 1-acyl-sn-glycerol-3-phosphate acyltransferases (EC 2.3.1.51). Proteins scoring above the trusted cutoff are likely to have the same general activity. However, there is variation among characterized members as to whether the acyl group can be donated by acyl carrier protein or coenzyme A, and in the length and saturation of the donated acyl group. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 130 |
| >gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 37/193 (19%), Positives = 58/193 (30%), Gaps = 30/193 (15%)
Query: 23 VVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIA-------GLLYYLVSESA 75
+ D DGTL R S A + ++ L L + I+ L S S
Sbjct: 2 AIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSE 61
Query: 76 GIQVLIFASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVE 135
+ A V LR E ++ +++ VE
Sbjct: 62 EVAKEFLARQVALRPGARELISWLK-----------------ERGIDTVIVSGGFDFFVE 104
Query: 136 AFLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNKKADALLKAFGETQPE----IG 190
+ L D V + G TG + G K L + E++ I
Sbjct: 105 PVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKIIA 163
Query: 191 LGDRQTDIPFMAL 203
+GD D+P + L
Sbjct: 164 VGDSVNDLPMLKL 176
|
This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 36/190 (18%), Positives = 61/190 (32%), Gaps = 17/190 (8%)
Query: 22 TVVADMDGTLLRGRSSFPYF--ALVAFEAGGILRLLFLLLASPIAGL--LYYLVSESAGI 77
VV D+DGTL G P L A A G+ ++ G L + A
Sbjct: 3 AVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRALA 62
Query: 78 QVLIFASFVGLRVTDIESVARAVLPKFYASD-LHPESWRVFSSCGKR----CVLTANPRI 132
+ + T + + VL +D L+P + + +LT + R+
Sbjct: 63 GEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRL 122
Query: 133 MVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLG 192
A + D ++ ++ G P + + L E + +G
Sbjct: 123 TANAIARLLGLFDALVSADLYGLVGVGK-----PDPKIFELALEELGVKPEEV---LMVG 174
Query: 193 DRQTDIPFMA 202
D DIP
Sbjct: 175 DGVNDIPAAK 184
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 504 | |||
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 100.0 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 100.0 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 100.0 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 100.0 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 100.0 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 100.0 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.98 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.97 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.97 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.97 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.96 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.94 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.94 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.92 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.91 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.9 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.89 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.89 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.89 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.89 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.88 | |
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.86 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.85 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.85 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.84 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.83 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.82 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.82 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.82 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.81 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.8 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.8 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.79 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.78 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.76 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.76 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.76 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.72 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.71 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.69 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.66 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.65 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.65 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.62 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.62 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.6 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 99.56 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.55 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.52 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.45 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.27 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.27 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.26 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 99.25 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.21 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 98.78 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.75 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.73 | |
| KOG2898 | 354 | consensus Predicted phosphate acyltransferase, con | 98.72 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.69 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.68 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.67 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 98.64 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.64 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.63 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.56 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.37 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 98.36 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.36 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.36 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.32 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.3 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 98.29 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 98.28 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.26 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.26 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.26 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.25 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 98.24 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.24 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 98.23 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.22 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.15 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 98.13 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.13 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.11 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.11 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.1 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.1 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 98.05 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 98.04 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 98.03 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 98.0 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.99 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.98 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.98 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 97.98 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.97 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.95 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 97.91 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.86 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.84 | |
| PLN02940 | 382 | riboflavin kinase | 97.84 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.76 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.73 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.7 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.69 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.66 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 97.65 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.64 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 97.63 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.58 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.56 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.51 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 97.5 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.5 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.45 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.41 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.38 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 97.38 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.38 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.37 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.29 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 97.28 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.21 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.11 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.04 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 96.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.93 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.88 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.88 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 96.86 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.81 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 96.78 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.77 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.72 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 96.71 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.71 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.68 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.64 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 96.64 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.62 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.61 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 96.54 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.46 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.45 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.45 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.44 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.44 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.42 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.31 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 96.31 | |
| PLN02887 | 580 | hydrolase family protein | 96.3 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 96.28 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.28 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.25 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.23 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.22 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.18 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 96.16 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.04 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 95.96 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 95.89 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 95.89 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.88 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 95.82 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 95.76 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.75 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.66 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.64 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.63 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 95.62 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 95.51 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 95.5 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 95.47 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.4 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.13 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 95.11 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.09 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 95.06 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.95 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 94.91 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.9 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 94.84 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.72 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.24 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 94.08 | |
| PLN02811 | 220 | hydrolase | 93.97 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.91 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 93.79 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 93.61 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 93.35 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 93.17 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.09 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 92.98 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.81 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 91.99 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 91.98 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 91.67 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 91.2 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 90.67 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 90.66 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.55 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 88.51 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 87.8 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 87.75 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 87.69 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 87.5 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 87.2 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 86.94 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 86.68 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 86.22 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 85.99 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 85.53 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 85.14 | |
| PLN02423 | 245 | phosphomannomutase | 85.06 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 85.0 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.45 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 82.96 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 82.18 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 81.74 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 81.55 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 81.49 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 80.69 |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=767.68 Aligned_cols=490 Identities=61% Similarity=1.040 Sum_probs=442.9
Q ss_pred cCCCCcccccccCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHH
Q 043920 4 SGFPSSVEKCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFA 83 (504)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 83 (504)
|-+.++.++|++.+++...++|||||||++++|++.+|.+++.+.+++.+.+.++..+|.+++.+....++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~ 85 (497)
T PLN02177 6 SRRFEPISKCSSEGRSNQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFI 85 (497)
T ss_pred cCCCCccccCCcccccccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHH
Confidence 44566899999999999999999999999999999877766666566777776777778887655444555557788888
Q ss_pred HhcCCCHHHHHHHHHHHcchhhhcccCHHHHHHHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEE-eCCeeeee
Q 043920 84 SFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIAT-YKGRATGL 162 (504)
Q Consensus 84 ~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~-~~g~~tG~ 162 (504)
+++|++.+++++++++|+++++.+.+++++++.++++|+++|||||++.+|+|||+++||+|+|+||++++ .||++||+
T Consensus 86 ~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~~~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~ 165 (497)
T PLN02177 86 AFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVFNSFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF 165 (497)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee
Confidence 99999999999999999999888999999999999999888899999999999997658999999999999 59999999
Q ss_pred EeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCccCCcchh
Q 043920 163 VRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRLVRKPAPL 242 (504)
Q Consensus 163 i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~~~~~~~~ 242 (504)
+.|+||.+|++|++++++.++....++|||||.+|+|||++|+++++||+++ ++.++++++..|+||||||++++|++.
T Consensus 166 i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~-~~~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 166 MKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTK-CEPLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred ecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCC-CCcCCcccCCCceeeeCCcccCCCCHH
Confidence 9998644999999999988875434589999999999999999999999966 898999888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh
Q 043920 243 MALLIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL 322 (504)
Q Consensus 243 ~~l~~~~~~P~g~~~~~~r~~~~~~l~~~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~ 322 (504)
++|++++|+|+|++++++|+++++.+|.+|.+.+++++|++++|+|.+|+|... .++++|+||||+|++|+++++.++
T Consensus 245 ~~l~~~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~~~--~~~~~l~v~NHqS~lD~~~l~~al 322 (497)
T PLN02177 245 VALLTFLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPKK--GQPGVLFVCNHRTVLDPVVTAVAL 322 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCccc--CCCCeEEEECCCCcchHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999987210 147999999999999999999999
Q ss_pred CCCccEEEecccchhhhhccCceeEeecCChhhHHHHHHHhhcCCEEEEcCceeeCCCccccccccccccCCeEEEEEEE
Q 043920 323 GRPIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMV 402 (504)
Q Consensus 323 ~~~~~~v~k~~~~~~~~~~~~g~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~ 402 (504)
++++.++++++..+++++..+++++++|++.++.+++++.+++|+++|||||||++++.+++||+||+++..|||||+|.
T Consensus 323 ~~~~~~v~~~~~~l~~~l~~i~~~~ldR~r~~~~~~~~~lL~~g~lvIFPEGTrs~~~~l~~Fk~~fa~l~~pIVPVAI~ 402 (497)
T PLN02177 323 GRKISCVTYSISKFSELISPIKAVALSREREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAIN 402 (497)
T ss_pred CCCeEEEeehHHHHHHHHHhcCEEEEeCCChHHHHHHHHHHhcCCEEECcCcCCCCCCCcchHHHHHHHHCCcEEEEEEE
Confidence 98899999887778899999999999999877777788889999999999999999999999999998888999999999
Q ss_pred ccccCccccccCCCCCCccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHH
Q 043920 403 NRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRA 482 (504)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~~ 482 (504)
++..++.+++.++++++|++|++++|++.++|+||+|++++.-|..+++..|+|++||+.|+++|++++|++|++|||++
T Consensus 403 ~~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq~~i~~~lg~~~t~~tr~dk~~~ 482 (497)
T PLN02177 403 TKQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLGFECTNLTRKDKYAI 482 (497)
T ss_pred cccccccccccccceecchhhhhcCCCceEEEEECCCCChhhcccCCCCHHHHHHHHHHHHHHhhCceeccccHHHHHHH
Confidence 98889998888999999999999999999999999999998644358999999999999999999999999999999999
Q ss_pred hcCCCcccccCCCC
Q 043920 483 LAGNDGTVVEKPFI 496 (504)
Q Consensus 483 ~~~~~~~~~~~~~~ 496 (504)
||||||.|+.++..
T Consensus 483 l~gn~g~v~~~~~~ 496 (497)
T PLN02177 483 LAGTDGRVPSKKEK 496 (497)
T ss_pred hcCCCccccCCCCC
Confidence 99999999877653
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-90 Score=706.89 Aligned_cols=486 Identities=55% Similarity=0.938 Sum_probs=443.4
Q ss_pred cCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHH
Q 043920 15 SIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIE 94 (504)
Q Consensus 15 ~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~ 94 (504)
+.+|++..++|||||||+.+.|++++|++.+.+.++..|...++..+|.+++++.....+.++|.+++.+|+|++.++++
T Consensus 3 ~~~~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~~~~~~lK~mi~v~f~Gl~~~die 82 (498)
T PLN02499 3 QSGTTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLGMGDAALKLMIFVATAGVHESEIE 82 (498)
T ss_pred cCCcccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcCCchHHHHHHHHHHhCCCCHHHHH
Confidence 45788899999999999997777877777677778899988888899999976543334555889999999999999999
Q ss_pred HHHHHHcchhhhcccCHHHHHHHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeC-CeeeeeEeCCCCCCchh
Q 043920 95 SVARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYK-GRATGLVRDPGVLVGNK 173 (504)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~-g~~tG~i~g~~~l~g~~ 173 (504)
+.++.++++++.+.+++++++.++++|.++||||||+.+||||+++|||+|.|+|||+++++ |++||.++|.|| ++.
T Consensus 83 ~vaRavlpkf~~~dv~~e~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~--~ek 160 (498)
T PLN02499 83 SVARAVLPKFYMDDVDMEAWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDV--DQS 160 (498)
T ss_pred HHHHHHhhHHHHhhCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCcc--HHH
Confidence 99999999999999999999999999977789999999999999999999999999999985 999999999887 666
Q ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCC--cchhccccccCCCceeeeCCCccCCcchhHHHHHHHHH
Q 043920 174 KADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSK--PEVKAVTCDKLPKPIIFHDGRLVRKPAPLMALLIILWT 251 (504)
Q Consensus 174 Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~--~~l~~~A~~~~~W~i~f~~~r~~~~~~~~~~l~~~~~~ 251 (504)
|++++++.+++...++++||+.+|.++++.|+.-++++.. +.++.+.++++-.|+||||||++++|++.++|++++|+
T Consensus 161 ~~~rl~~~~g~~~~~vg~~~~~~~~~f~~~ck~~~~~~~~~~~~~~~~~~~~~~~p~ifhdgrl~~~ptp~~~l~~~~w~ 240 (498)
T PLN02499 161 VANRVANLFVDERPQLGLGRISASSSFLSLCKEQIHPPFPANYNGDNQQQLVRPLPVIFHDGRLVKRPTPATALLILLWI 240 (498)
T ss_pred HHHHHHHHhCccCceecccCCcccchhhhhCceEEecCcccccccccCccccCCCCeEEeCCcccCCCCHHHHHHHHHHH
Confidence 6999999998767799999999999999999987777653 34666777677789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHhHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEe
Q 043920 252 PIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTY 331 (504)
Q Consensus 252 P~g~~~~~~r~~~~~~l~~~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k 331 (504)
|+|++++++|++.+..+|.|....+..++|++++|+|.||+|+.. .++++|+||||+|++|++++..++++++.++++
T Consensus 241 P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~~--~~~gvL~v~NH~S~lDp~~l~~al~R~v~~vay 318 (498)
T PLN02499 241 PLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPASG--GNSGVLFVCTHRTLMDPVVLSTVLGRSIPAVTY 318 (498)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCcC--CCCCEEEEeCCCCcccHHHHHHHcCCceeehHh
Confidence 999999999999999999988889999999999999999998310 126999999999999999999999999999998
Q ss_pred cccchhhhhccCceeEeecCChhhHHHHHHHhhcCCEEEEcCceeeCCCccccccccccccCCeEEEEEEEccccCcccc
Q 043920 332 SVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGT 411 (504)
Q Consensus 332 ~~~~~~~~~~~~g~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~~~~~~~~ 411 (504)
+++.++++++.+++++++|++..+.+++++.|++|.++|||||||++++.|++||+|+++..+|||||+|....++++++
T Consensus 319 ~~~~ls~ll~~i~avrv~R~r~~d~~air~lL~~G~lvIFPEGTrsreg~LlrFk~l~aela~pVVPVAI~~~~~~f~gt 398 (498)
T PLN02499 319 SISRLSEILSPIPTVRLTRIRDVDAEKIKRELARGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHAT 398 (498)
T ss_pred hHHHHHHHhcccCeeeecCCchhHHHHHHHHhhCCCEEEcCCCCCCCCCcccccchhhhhhcCceEeEEEEeccceEEEE
Confidence 88889999999999999999877789999999999999999999999999999999998889999999999999999999
Q ss_pred ccCCCCCCccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHhcCCCcccc
Q 043920 412 TARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVV 491 (504)
Q Consensus 412 ~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~~~~~~~~~~~ 491 (504)
+.++|+++|++|++++|.+.++|+||++++.+.-|+.+++..|+|++||+.|+++||+++|++|++|||++||||||.|+
T Consensus 399 ta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~~g~s~~evan~vQ~~la~~LgfecT~lTrkdKy~~lagndg~v~ 478 (498)
T PLN02499 399 TARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVS 478 (498)
T ss_pred cCCCCchhhhhhheecCCceEEEEEcCCCChhhccCCCCChHHHHHHHHHHHHHHhCCccccccHHHHHHHhcCCCcccc
Confidence 88999999999999999999999999999988666668999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-CccCCC
Q 043920 492 EKPFIKP-NKVMGC 504 (504)
Q Consensus 492 ~~~~~~~-~~~~~~ 504 (504)
.+++.+. +|+|||
T Consensus 479 ~~~~~~~~~~~~~~ 492 (498)
T PLN02499 479 YLSFLDQLKKVVST 492 (498)
T ss_pred CccchhHHHhhhhc
Confidence 9888887 999998
|
|
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-79 Score=622.57 Aligned_cols=462 Identities=41% Similarity=0.756 Sum_probs=414.8
Q ss_pred CCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHHH
Q 043920 16 IGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIES 95 (504)
Q Consensus 16 ~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~~ 95 (504)
.+++...+++|+||||+.+.|+|+|+++.+.|.++++|.+.++..+|.+++. +++.+++.+++..+.|+++++++
T Consensus 46 ~~~~~~t~v~d~~g~Ll~s~s~FpyfmlvA~Eag~~lR~l~Ll~~~P~~~~~----~~~~~~~~m~~v~f~Gl~~~~~~- 120 (525)
T PLN02588 46 QDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLFVLYPFISLM----SYEMGLKTMVMLSFFGVKKESFR- 120 (525)
T ss_pred cccccceEEEecccceeccCCCCcceeeeeeccccHHHHHHHHHHhHHHHHh----ccchhhHHhHHHhhcCCcHHHhh-
Confidence 6677888999999999999999999998888999999999999999999963 66777899999999999999888
Q ss_pred HHHHHcchhhhcccCHHHHHHHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHH
Q 043920 96 VARAVLPKFYASDLHPESWRVFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKA 175 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv 175 (504)
.++..+|+++.+++.+|+++-.++-|.+++||+.|+.+||+++++|||+|.|+|||+++..|++||.+++. .|.
T Consensus 121 v~ravLPkf~~~dv~~e~~~v~~~~~~~~vv~~~PrvMve~Flkeyl~~d~V~g~El~~~~g~~tG~~~~~------~~~ 194 (525)
T PLN02588 121 AGKAVLPKYFLEDVGLEMFQVLKRGGKRVGVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVGGYYLGIMEDK------KKH 194 (525)
T ss_pred hHHhhccHHHHhhcCHHHHHHHhhcCcEEEEecCCHHHHHHHHHHhcCcceEeeeeEEEeeeEEEEEEccc------chH
Confidence 99999999999999999999777778888899999999999999999999999999999999999999853 344
Q ss_pred HHHHH-HhCCCCC----eEEEeCC---CCCHHHHhhcccCeeeCCCcc--hhccccccCCCceeeeCCCccCCcchhHHH
Q 043920 176 DALLK-AFGETQP----EIGLGDR---QTDIPFMALCKEGYLVPSKPE--VKAVTCDKLPKPIIFHDGRLVRKPAPLMAL 245 (504)
Q Consensus 176 ~~l~~-~~~~~~~----~~aygDS---~~DlpmL~~a~~~~~Vnp~~~--l~~~A~~~~~W~i~f~~~r~~~~~~~~~~l 245 (504)
....+ .+++.-. ++++||+ .+|.+++..|++.|+|+++++ ++.++++++..|+||||||++++|++.++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~~~~~~~~~~p~~~~~~pliFHDGRL~~rPtp~~~l 274 (525)
T PLN02588 195 ELAFDKVVQEERLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPRDQYPKPLIFHDGRLAIKPTPLNTL 274 (525)
T ss_pred HHHHHHHhcccCcccccceeecccCcccccchhHHhCcceEEeChhhccccccCCcccCCCceeEeCCcccCCCChHHHH
Confidence 44444 4555444 8899998 789999999999999998665 999999888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhC-C
Q 043920 246 LIILWTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALG-R 324 (504)
Q Consensus 246 ~~~~~~P~g~~~~~~r~~~~~~l~~~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~-~ 324 (504)
++++|+|+|++++++|+.+++.+|.++...++.++|++++++|..+.+. ..++|+|+||||+|++|++++..+++ +
T Consensus 275 ~~~~wlP~g~~La~~R~~~~~~lP~~~~~~~~~~~Gvrl~v~g~~p~~~---~~~~gvI~V~NH~S~LDPi~L~~Al~rr 351 (525)
T PLN02588 275 VLFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISS---DRKKGCLFVCNHRTLLDPLYISYALRKK 351 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHcCcEEEEEeCCCCCC---CCCCCEEEEECCcchhhHHHHHHHcccC
Confidence 9999999999999999999999999999999999999999996543221 14579999999999999999999986 5
Q ss_pred CccEEEecccchhhhhccCceeEeecCChhhHHHHHHHhhcCCEEEEcCceeeCCCccccccccccccCCeEEEEEEEcc
Q 043920 325 PIPTVTYSVSRLSEIISPIKAVRLSRDRATDASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNR 404 (504)
Q Consensus 325 ~~~~v~k~~~~~~~~~~~~g~i~i~R~~~~~~~~~~~~l~~G~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~ 404 (504)
++.++.+++++++++++.+++++|+|++..+.+++++.+++|.++|||||||++++.|++||+|+.++..+||||+|+++
T Consensus 352 ~I~~mtFsip~lg~lL~~i~ti~VdRdr~~D~~aI~~LLk~GdlVIFPEGTRsr~g~LlrFk~l~A~la~~IVPVAI~~~ 431 (525)
T PLN02588 352 NIKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSH 431 (525)
T ss_pred cceEEEEEhHHHHHHHHhcCceeecCCCcchHHHHHHHHhCCCEEEccCccccCCCcccChhhhHHHhcCceeeEEEEEe
Confidence 68888888888999999999999999987777888889999988899999999999999999998777899999999999
Q ss_pred ccCccccccCCCCCCccccccccCCCeEEEEEecCcCC--ccccC---CCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 405 MSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPM--ELTCG---SGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~--~~~~~---~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
..++++++..+|+++|++|++++|.+.++|+||++++. +.-++ .+++..|+|++||+.|+++||+++|++|++||
T Consensus 432 ~~~f~gtt~~g~k~~D~~~fl~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~e~T~~Tr~dk 511 (525)
T PLN02588 432 VTFFYGTTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGFECTNLTRRDK 511 (525)
T ss_pred ccccceeecCCCcccceeEEEecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCceecccchhhh
Confidence 88999988889999999999999999999999999996 32333 26889999999999999999999999999999
Q ss_pred HHHhcCCCcccc
Q 043920 480 YRALAGNDGTVV 491 (504)
Q Consensus 480 ~~~~~~~~~~~~ 491 (504)
|++||||||.|.
T Consensus 512 Y~~LaGndG~v~ 523 (525)
T PLN02588 512 YLILAGNNGVVK 523 (525)
T ss_pred hheecCCCcccC
Confidence 999999999884
|
|
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=280.96 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=157.7
Q ss_pred HhhhhhHhHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhh
Q 043920 264 AGALLPMSTVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEI 339 (504)
Q Consensus 264 ~~~~l~~~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~ 339 (504)
.+......|+..+.+..|+|++|+|.|+++ +++|+|+||||||.||++.|+..+|..+..++|+ +|.+|++
T Consensus 57 ~n~~~a~~~~~~~~y~~g~r~ev~g~E~L~-----~~~p~ViVsNHQS~LDil~m~~i~p~~cvviaKr~L~yvp~~gl~ 131 (276)
T KOG2848|consen 57 ENHFIAKLWFHSMKYLLGLRFEVRGEENLP-----KSKPAVIVSNHQSSLDILGMGSIWPKNCVVIAKRSLFYVPIFGLA 131 (276)
T ss_pred HHHHHHHHHHHHHhhhcceEEEEechhhCC-----ccCCeEEEecchhHHHHHHHHhhcCCceEEEEeeeeeecchHHHH
Confidence 344444568899999999999999999998 6789999999999999999999999988999997 6899999
Q ss_pred hccCceeEeecCChhh----HHHHHHHhhcC--CEEEEcCceeeCCCcccccccc-c---cccCCeEEEEEEEccccCcc
Q 043920 340 ISPIKAVRLSRDRATD----ASTIKKLLEEG--DLAMCPEGTTCREPFLLRFSAL-F---AELTDELVPVAMVNRMSMFH 409 (504)
Q Consensus 340 ~~~~g~i~i~R~~~~~----~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~G-~---~~~~~pIvPV~i~~~~~~~~ 409 (504)
+...|.+||||.++++ ++.+.+.++++ ++++||||||++++.|+|||+| | .++++||+||+++++..+++
T Consensus 132 m~L~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~ 211 (276)
T KOG2848|consen 132 MYLSGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYS 211 (276)
T ss_pred HHHcCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEEEEEEeccccccc
Confidence 9999999999988765 45566677666 8999999999999999999999 5 67899999999999776654
Q ss_pred ccccCCCCCCccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 410 GTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
... ..++.|. +.|++||||+++.+ ...+-.++++++|++|.+.+.
T Consensus 212 ~~~-----------k~f~sG~-v~V~vL~pI~Tegl--T~ddv~~L~~~~R~~M~~~~~ 256 (276)
T KOG2848|consen 212 TKE-----------KVFNSGN-VIVRVLPPIPTEGL--TKDDVDVLSDECRSAMLETFK 256 (276)
T ss_pred Ccc-----------ceeecce-EEEEEcCCCCccCC--CcccHHHHHHHHHHHHHHHHH
Confidence 331 3456677 99999999999843 234567899999999999865
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=278.75 Aligned_cols=194 Identities=20% Similarity=0.324 Sum_probs=150.6
Q ss_pred CcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhc---cccccHHHHHHHHHHhcCCCHHHHH
Q 043920 18 REKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYY---LVSESAGIQVLIFASFVGLRVTDIE 94 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~G~~~~~l~ 94 (504)
+++++|+|||||||+++||+..|+.+...+ .+......++..+...+.+. ..++.. ++..++.+++|++.++++
T Consensus 3 ~~~~la~FDfDgTLt~~ds~~~fl~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~~~~~l~ 79 (210)
T TIGR01545 3 GAKRIIFFDLDGTLHQQDMFGSFLRFLLRH--LPLNALLVIPLLPIIAIALLIGGRAARWP-MSLLLWACTFGHREAHLQ 79 (210)
T ss_pred CcCcEEEEcCCCCCccCccHHHHHHHHHHH--hHHHHHHHHHHHHHHHHhhcccccccchh-hHHHHHHHHcCCCHHHHH
Confidence 378999999999999999999999977532 12222222222222221111 112222 567778899999999999
Q ss_pred HHHHHHcchhhhc-ccCHHHHH---HH-hhCCCEE-EEecCcHHHHHHHHHhhcCC---cEEEeeeEEEeCCeeeeeEeC
Q 043920 95 SVARAVLPKFYAS-DLHPESWR---VF-SSCGKRC-VLTANPRIMVEAFLKDFLAA---DLVLGTEIATYKGRATGLVRD 165 (504)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~~~~~---~~-~~~G~~v-vvSas~~~~v~~ia~~~Lg~---d~vigt~l~~~~g~~tG~i~g 165 (504)
+++++|.+.+... .++|++.+ +| +++|+.+ |||||++.+++++++. +++ +++|||++++++| |++.|
T Consensus 80 ~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i~t~le~~~g---g~~~g 155 (210)
T TIGR01545 80 DLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLIASQIERGNG---GWVLP 155 (210)
T ss_pred HHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEEEEEeEEeCC---ceEcC
Confidence 9999998766554 57888877 34 4579887 5899999999999988 554 8999999998777 89999
Q ss_pred CCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcc
Q 043920 166 PGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAV 219 (504)
Q Consensus 166 ~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 219 (504)
+|| +|++|+++|+++++.. ...+|||||.||+|||+.|++|++||||++|+++
T Consensus 156 ~~c-~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~~ 209 (210)
T TIGR01545 156 LRC-LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQL 209 (210)
T ss_pred ccC-CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECcchHhccc
Confidence 999 9999999999999742 2346999999999999999999999999999975
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=267.17 Aligned_cols=196 Identities=23% Similarity=0.319 Sum_probs=157.0
Q ss_pred HHhhhh-cceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEe
Q 043920 274 YYAFWA-LGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRL 348 (504)
Q Consensus 274 ~~~~~~-~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i 348 (504)
|.++++ .|++++|+|.+++| ++|+|+||||+|++|++++... .+..+++|+ +|.+++++...|+++|
T Consensus 2 r~~~~~~~~~~~~v~g~~~~p------~~~~iiv~NH~S~~D~~~l~~~--~~~~fv~k~el~~~p~~g~~~~~~g~i~v 73 (211)
T cd07991 2 RVLLFAFGFYVIKVHGKPDPP------EAPRIIVANHTSFIDPLILFSD--LFPSIVAKKELGKLPFIGTILRALGCIFV 73 (211)
T ss_pred eEEEEEEEEEEEEEECCCCCC------CCCeEEEECCCcHHHHHHHhhh--cCcEEEEehhhccCcHHHHHHHhCCceEE
Confidence 455666 67999999999986 5789999999999999999987 466889986 6889999999999999
Q ss_pred ecCChhh----HHHHHHHhh--cC-CEEEEcCceeeCCCccccccccccccCCeEEEEEEEccccCccc-cccCCCC-CC
Q 043920 349 SRDRATD----ASTIKKLLE--EG-DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHG-TTARGWK-GM 419 (504)
Q Consensus 349 ~R~~~~~----~~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~~~~~~~-~~~~~~~-~~ 419 (504)
||++..+ ++.+.+.++ +| +|+||||||||+++.+++||+|++++++|||||+|+|+...... ....++. +.
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~ 153 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPNKFVDAFWNSSGYSSLM 153 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccCCCEEEeeccccccCCCeeEEEEEEecCccCCcccCCCCccHHH
Confidence 9987642 566777777 46 99999999999999999999998889999999999996431110 0001111 11
Q ss_pred ccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 043920 420 DPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKY 480 (504)
Q Consensus 420 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~ 480 (504)
..++.+..+...++|+|||||+++ . ++++++++++++|+.|++.|+.+.|++|.+||+
T Consensus 154 ~l~~~l~~~~~~v~v~~l~pi~~~-~--~~~~~~~l~~~v~~~i~~~l~~~~~~~~~~~~~ 211 (211)
T cd07991 154 YLFRLLTQPANVLEVEFLPVYTPS-E--EGEDPKEFANRVRLIMANKLGLPATDWTGEDKR 211 (211)
T ss_pred HHHHHhCCcceEEEEEECCCcccc-c--CCCCHHHHHHHHHHHHHHhcCCCccCCCCcccC
Confidence 222334455556999999999983 1 478999999999999999999999999999985
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=259.69 Aligned_cols=176 Identities=14% Similarity=0.167 Sum_probs=145.6
Q ss_pred HHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeE
Q 043920 272 TVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVR 347 (504)
Q Consensus 272 ~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~ 347 (504)
+++.+++++|++++++|.|++| .++|+|+||||+|++|++++...++++..+++|+ .|.++++++..|+++
T Consensus 41 ~~~~~~~~~g~~v~v~g~e~~p-----~~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~~g~i~ 115 (245)
T PRK15018 41 MFGRLAPLFGLKVECRKPADAE-----SYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLL 115 (245)
T ss_pred HHHHHHHHcCeEEEEEccCCCC-----CCCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHhCCCeE
Confidence 4455667899999999999998 6789999999999999999888877777899986 688999999999999
Q ss_pred eecCChhh----HHHHHHHhhc-C-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCC
Q 043920 348 LSRDRATD----ASTIKKLLEE-G-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWK 417 (504)
Q Consensus 348 i~R~~~~~----~~~~~~~l~~-G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~ 417 (504)
|||++..+ ++++.+.+++ | +++||||||||.++.+.+||+|+ .++++||+||+|.++...++.
T Consensus 116 VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~~------- 188 (245)
T PRK15018 116 IDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINL------- 188 (245)
T ss_pred EeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECccccccc-------
Confidence 99987643 4556666654 6 89999999999999999999994 578999999999996543321
Q ss_pred CCccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 418 GMDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 418 ~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
..+++++ ++|+||+||+++++ ..++.+++++++++.|.+.+.
T Consensus 189 ------~~~~~g~-i~v~~~~PI~~~~~--~~~~~~~l~~~v~~~i~~~~~ 230 (245)
T PRK15018 189 ------NRLHNGL-VIVEMLPPIDVSQY--GKDQVRELAAHCRSIMEQKIA 230 (245)
T ss_pred ------CCccCee-EEEEEcCCCcCCCC--ChhhHHHHHHHHHHHHHHHHH
Confidence 1234666 99999999999754 245688999999999998653
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=249.69 Aligned_cols=192 Identities=20% Similarity=0.345 Sum_probs=141.1
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH----HHHHHHHHHhcCCCHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA----GIQVLIFASFVGLRVTDIE 94 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~G~~~~~l~ 94 (504)
++++++|||||||+++++...|+.+...+.+ + .........+.... .+..... ....+++..+.|++.++++
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g-~-~~~~~~~~~~~ig~--~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQP-L-NLLLVLPLLPVIGL--GLLVKGRAARWPMSLLLWGCTFGHSEARLQ 80 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHhcc-h-hhHHHhHHHHHhcc--CcccchhhhhhhHHHHHHHHHcCCCHHHHH
Confidence 6789999999999999998888876533322 1 11111111111110 1111111 1134455567799999999
Q ss_pred HHHHHHcchhhh-cccCHHHHH---HH-hhCCCEE-EEecCcHHHHHHHHHhhcC---CcEEEeeeEEEeCCeeeeeEeC
Q 043920 95 SVARAVLPKFYA-SDLHPESWR---VF-SSCGKRC-VLTANPRIMVEAFLKDFLA---ADLVLGTEIATYKGRATGLVRD 165 (504)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~---~~-~~~G~~v-vvSas~~~~v~~ia~~~Lg---~d~vigt~l~~~~g~~tG~i~g 165 (504)
++.++|.+.+.. -..+|++.+ +| +++|+.+ |||||++.+++++++. +| +++++||++++ ++||++.|
T Consensus 81 ~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~~~~~i~t~l~~---~~tg~~~g 156 (211)
T PRK11590 81 ALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLPRVNLIASQMQR---RYGGWVLT 156 (211)
T ss_pred HHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccccCceEEEEEEE---EEccEECC
Confidence 999988553322 134777766 33 4578776 5899999999999999 99 58999999986 79999999
Q ss_pred CCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcc
Q 043920 166 PGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAV 219 (504)
Q Consensus 166 ~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~ 219 (504)
+|| +|++|+++|++|++.. ...+|||||.||+|||+.|++|++|||+++|+++
T Consensus 157 ~~c-~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~~ 210 (211)
T PRK11590 157 LRC-LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQL 210 (211)
T ss_pred ccC-CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECccHHhhcc
Confidence 999 9999999999999742 2346999999999999999999999999999875
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=247.25 Aligned_cols=192 Identities=27% Similarity=0.311 Sum_probs=150.3
Q ss_pred CCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHHHH
Q 043920 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDIES 95 (504)
Q Consensus 17 ~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l~~ 95 (504)
.+.+++++|||||||++. ..++++.... + ..... ........ .+..++. ..+.....++|++.+++++
T Consensus 2 ~~~~~L~vFD~D~TLi~~-~~~~~~~~~~---g-~~~~v--~~~t~~~~----~~~~~~~~~~~~~v~~l~g~~~~~v~~ 70 (212)
T COG0560 2 RRMKKLAVFDLDGTLINA-ELIDELARGA---G-VGEEV--LAITERAM----RGELDFEESLRLRVALLKGLPVEVLEE 70 (212)
T ss_pred CCccceEEEecccchhhH-HHHHHHHHHh---C-CHHHH--HHHHHHHh----cccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 457889999999999992 2233333221 1 11111 11111111 1112222 3345567899999999999
Q ss_pred HHHHHcchhhhcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCc
Q 043920 96 VARAVLPKFYASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVG 171 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g 171 (504)
+.+++. .++|++. ++|+++|++| |||||++++++|+++. ||+|+++|++++.+||++||++.|+.| .+
T Consensus 71 ~~~~~~------~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~-~~ 142 (212)
T COG0560 71 VREEFL------RLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPIC-DG 142 (212)
T ss_pred HHHhcC------cCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeec-Cc
Confidence 999872 2666664 4999999887 5899999999999999 999999999999999999999999988 99
Q ss_pred hhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCce
Q 043920 172 NKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPI 228 (504)
Q Consensus 172 ~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i 228 (504)
++|+++|++++.+.++ .+|||||.||+|||+.|++++++||++++++.|+ .++|++
T Consensus 143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~-~~~~~~ 202 (212)
T COG0560 143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALAD-VRIWPI 202 (212)
T ss_pred chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHH-HhcChh
Confidence 9999999999886665 4699999999999999999999999999999999 999998
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=238.61 Aligned_cols=191 Identities=21% Similarity=0.293 Sum_probs=149.9
Q ss_pred EEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhcc-c-cccHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043920 22 TVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYL-V-SESAGIQVLIFASFVGLRVTDIESVARA 99 (504)
Q Consensus 22 ~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 99 (504)
+|+|||||||+++||++.|+++...+ +.......+.... .....+.. . ......++.....++|++.+++++++++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~ 78 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASK-NILFEELRLPKVL-ARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEE 78 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHc-CCCCHHHHHHHHH-HHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 48999999999999999999876543 2121111111111 11111111 1 1112245566678999999999999999
Q ss_pred HcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEE-eCCeeeeeEeCCCCCCchhH
Q 043920 100 VLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIAT-YKGRATGLVRDPGVLVGNKK 174 (504)
Q Consensus 100 ~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~-~~g~~tG~i~g~~~l~g~~K 174 (504)
++++.+...++|++.+ .|+++|+.+ |+|+|++.++++++++ +|+++++|+++.+ +||.+||++.+++| .|++|
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~~~~~g~~~g~~~~~~~-~g~~K 156 (202)
T TIGR01490 79 FVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLEESEDGIYTGNIDGNNC-KGEGK 156 (202)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceEEcCCCEEeCCccCCCC-CChHH
Confidence 9998877888988866 677899776 5899999999999999 9999999999998 68999999999888 99999
Q ss_pred HHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcch
Q 043920 175 ADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEV 216 (504)
Q Consensus 175 v~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 216 (504)
++++++++++.++ .++||||.+|+||++.|+++++|||+++|
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l 202 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL 202 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence 9999999876554 46899999999999999999999999875
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=251.15 Aligned_cols=197 Identities=17% Similarity=0.232 Sum_probs=147.2
Q ss_pred HHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec-c---cch-hhhhccCcee
Q 043920 272 TVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS-V---SRL-SEIISPIKAV 346 (504)
Q Consensus 272 ~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~-~---~~~-~~~~~~~g~i 346 (504)
+++.+....+..++++|.++.+ ++++|+||||+|++|++++.+..+ ..+++|+ . +.+ +++++..|++
T Consensus 140 ~~~~~~~~~~~~i~v~G~e~~~------~~~~IiVaNH~S~lDi~vL~s~~p--~~~v~kk~~~~~~~~~~~~~~~~g~I 211 (376)
T PLN02833 140 ICSAFVASWTGVIKYHGPRPSR------RPKQVFVANHTSMIDFIVLEQMTP--FAVIMQKHPGWVGFLQNTILESVGCI 211 (376)
T ss_pred HHHHHHHHhEEEEEEECCcCCC------CCCEEEEECCCChHHHHHHHhhcC--ceEEEEehhhhhHHHHHHHHHHcCcE
Confidence 3444444555668899988764 568999999999999999998764 3566665 2 222 2556778999
Q ss_pred EeecCChhhH----HHHHHHhh--cC-CEEEEcCceeeCCCccccccccccccCCeEEEEEEEccccCcccccc--CCCC
Q 043920 347 RLSRDRATDA----STIKKLLE--EG-DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTA--RGWK 417 (504)
Q Consensus 347 ~i~R~~~~~~----~~~~~~l~--~G-~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~~~~~~~~~~--~~~~ 417 (504)
+|||++..+. +.+++.++ +| +++||||||||+++.+++||+|++++++|||||+|+|..... +..+ ....
T Consensus 212 ~VdR~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~-~~fW~s~~~s 290 (376)
T PLN02833 212 WFNRTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFELGCTVCPIAIKYNKIFV-DAFWNSRKQS 290 (376)
T ss_pred EecCCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHhcCCeEEEEEEEecCccc-ccccCCCCcc
Confidence 9999876553 44555555 57 999999999999999999999988999999999999864321 1101 0111
Q ss_pred CCcccc-ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 043920 418 GMDPFY-FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYR 481 (504)
Q Consensus 418 ~~~~~~-~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~ 481 (504)
+...+| .+..+...++|+|||||+.+ ++++++++++++|+.|++++|....++...-||.
T Consensus 291 ~~~~l~~ll~~~~~~v~V~~LpPi~~~----~~e~~~efA~rv~~~Ia~~lgi~~~~wdg~lk~~ 351 (376)
T PLN02833 291 FTMHLLRLMTSWAVVCDVWYLEPQTLR----PGETPIEFAERVRDMIAKRAGLKKVPWDGYLKYY 351 (376)
T ss_pred HHHhHHHHhCCCceEEEEEECCCcCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCceeec
Confidence 222333 34456667999999999886 4789999999999999999999999987666654
|
|
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-27 Score=225.02 Aligned_cols=168 Identities=21% Similarity=0.282 Sum_probs=137.5
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChh
Q 043920 279 ALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRAT 354 (504)
Q Consensus 279 ~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~ 354 (504)
..+++++++|.+++|. .++|+|+||||+|++|++++.. ..+++.+++|+ .|.+++++...|+++|||++.+
T Consensus 32 ~~~~~~~v~g~e~lp~----~~~p~iiv~NH~S~~D~~~l~~-~~~~~~~v~k~~l~~~P~~g~~~~~~~~i~v~R~~~~ 106 (214)
T PLN02901 32 SPFYKIEVEGLENLPS----PDEPAVYVSNHQSFLDIYTLFH-LGRPFKFISKTSIFLIPIIGWAMYMTGHIPLKRMDRR 106 (214)
T ss_pred hcceeEEEECCccCCC----CCCcEEEEECCCCchHHHHHhh-cCCceEEEEEHHhhhccHHHHHHHHCCcEEEecCCcH
Confidence 4688999999999972 2579999999999999998765 45678899986 6888999999999999997754
Q ss_pred h----HHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCcccccc
Q 043920 355 D----ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFF 425 (504)
Q Consensus 355 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 425 (504)
+ ++.+.+.+++| +++|||||||+.++.+.+|++|+ .++++||+||++.|+...+.... ++.
T Consensus 107 ~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~----------~~~ 176 (214)
T PLN02901 107 SQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPITLVGTGKIMPNGK----------EGI 176 (214)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEEEEecchhhCcCCC----------ccc
Confidence 3 56778889999 99999999999889999999994 46899999999998544333210 023
Q ss_pred ccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 043920 426 MNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSY 469 (504)
Q Consensus 426 ~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~ 469 (504)
.+++. ++|++++||+++ +.+++++++++.|.+.++.
T Consensus 177 ~~~~~-i~v~~~~pi~~~-------~~~~l~~~~~~~i~~~~~~ 212 (214)
T PLN02901 177 LNPGS-VKVVIHPPIEGS-------DADELCNEARKVIAESLVQ 212 (214)
T ss_pred ccCCe-EEEEECCCcCCC-------CHHHHHHHHHHHHHHHhhh
Confidence 45666 999999999864 5789999999999998764
|
|
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=228.40 Aligned_cols=155 Identities=17% Similarity=0.162 Sum_probs=121.4
Q ss_pred CCcEEEEecCCCCChHHHHHHhhCC----CccEEEec----ccchhhhhccCceeEeecCChh---------h----HHH
Q 043920 300 QTGVLFVCSHRTLLDPIFLSVALGR----PIPTVTYS----VSRLSEIISPIKAVRLSRDRAT---------D----AST 358 (504)
Q Consensus 300 ~~~~viVaNH~S~lD~~~l~~~~~~----~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~---------~----~~~ 358 (504)
++++|++|||+|++|++++...++. ++.+++|+ +|++|+++...|+|+|+|++.. . .+.
T Consensus 128 ~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~~v~~~ 207 (355)
T PTZ00261 128 RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQAQVQQA 207 (355)
T ss_pred CCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHHHHHHH
Confidence 4689999999999999999998873 56889997 7889999999999999985321 1 234
Q ss_pred HHHHhhcC-CEEEEcCceeeCCC-cccccccc-c---cccCCeEEEEEEEccccCccccccCCCCCCccccccccCCCeE
Q 043920 359 IKKLLEEG-DLAMCPEGTTCREP-FLLRFSAL-F---AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAY 432 (504)
Q Consensus 359 ~~~~l~~G-~l~IFPEGTrs~~~-~l~~Fk~G-~---~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 432 (504)
+++.+++| +++||||||||.++ .+++||+| | .+.++||+|+++.|+...|.... +....|++ +
T Consensus 208 ~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP~g~----------~l~~~pg~-I 276 (355)
T PTZ00261 208 IDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWPWWM----------MIGGLPAD-M 276 (355)
T ss_pred HHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCCCCC----------ccCCCCce-E
Confidence 45788999 99999999999865 59999999 4 57899999999999766554320 01224666 9
Q ss_pred EEEEec-CcCCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 043920 433 EVTFLN-KLPMELTCGSGKSSHEVANYIQRVIAATLSYE 470 (504)
Q Consensus 433 ~V~~l~-pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~ 470 (504)
+|+||+ ||+++ +.+.+++++++++.|.+..+.-
T Consensus 277 ~V~iG~~PI~~~-----~~~~~eL~~~lr~lmqe~~~~I 310 (355)
T PTZ00261 277 HIRIGAYPIDYD-----RDSSKDVAVGLQQRMQKVRDEI 310 (355)
T ss_pred EEEECCCCCCCC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 99986 5677777777777776665443
|
|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=205.45 Aligned_cols=151 Identities=20% Similarity=0.268 Sum_probs=126.5
Q ss_pred hHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCC-CCChHHHHHHhhCCCccEEEec----ccchhhhhccCce
Q 043920 271 STVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHR-TLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKA 345 (504)
Q Consensus 271 ~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~-S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~ 345 (504)
+|++.++++.+.+++|+|.|++| .++|+|+|+||+ |++|+++++.+.++++.+++++ .|.+++++..+|+
T Consensus 3 ~~~~~~~~~~~~~v~v~G~e~lp-----~~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~~~~~g~ 77 (203)
T cd07992 3 LLSRVILRIYFRRITVVGRENVP-----KDGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWLLESFGA 77 (203)
T ss_pred EehhehhhhEeeeeEEECCccCC-----CCCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHHHHHcCc
Confidence 36778888888899999999998 689999999999 6899999998888888999986 5778999999999
Q ss_pred eEeecCCh------------hhHHHHHHHhhcC-CEEEEcCceeeCCCccccccccc---c-------ccCCeEEEEEEE
Q 043920 346 VRLSRDRA------------TDASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF---A-------ELTDELVPVAMV 402 (504)
Q Consensus 346 i~i~R~~~------------~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~---~-------~~~~pIvPV~i~ 402 (504)
++|+|++. ..++.+.+.+++| +++|||||||+.++.+.+||+|+ + .+++||+||+|.
T Consensus 78 ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~ 157 (203)
T cd07992 78 IPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLN 157 (203)
T ss_pred eEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEE
Confidence 99999753 2356788899999 99999999999989999999994 2 269999999999
Q ss_pred ccccCccccccCCCCCCccccccccCCCeEEEEEecCcCCccc
Q 043920 403 NRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~ 445 (504)
|..... +...++|.+++||+++++
T Consensus 158 ~~~~~~-------------------~~~~i~i~~g~pi~~~~~ 181 (203)
T cd07992 158 YEDKSR-------------------FRSRVLVEFGKPISVSAF 181 (203)
T ss_pred eCCCCC-------------------CCCeEEEEECCCcccccc
Confidence 853210 123499999999998753
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=197.36 Aligned_cols=144 Identities=17% Similarity=0.157 Sum_probs=112.8
Q ss_pred HHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHh---hCCCccEEEec----ccchhhhhccCcee
Q 043920 274 YYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVA---LGRPIPTVTYS----VSRLSEIISPIKAV 346 (504)
Q Consensus 274 ~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~---~~~~~~~v~k~----~~~~~~~~~~~g~i 346 (504)
+.+++++|++++ |. +|. .++|+|+||||+|++|++++..+ .++++.+++|+ .|. +++++..|++
T Consensus 2 ~~~~~~~g~~~~--g~--~p~----~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~-g~~~~~~g~i 72 (163)
T cd07988 2 RLLLRLSGWRIE--GE--PPN----KPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPL-GPFMRWLGGI 72 (163)
T ss_pred ceEEEecCEEEE--eE--cCC----CCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcH-HHHHHHcCCE
Confidence 456778898865 43 331 35799999999999999998765 46778899996 566 8899999999
Q ss_pred EeecCChh-hHHHHHHHhhcC---CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCC
Q 043920 347 RLSRDRAT-DASTIKKLLEEG---DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKG 418 (504)
Q Consensus 347 ~i~R~~~~-~~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~ 418 (504)
+|+|++.. .++++.+.+++| +++|||||||+.. .+||+|+ .++++||+||+|+++.
T Consensus 73 ~V~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~~------------- 136 (163)
T cd07988 73 PVDRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYKR------------- 136 (163)
T ss_pred EeEcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecCc-------------
Confidence 99998764 377788888764 6999999999985 4899994 6789999999998741
Q ss_pred CccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHH
Q 043920 419 MDPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQR 461 (504)
Q Consensus 419 ~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~ 461 (504)
.+|+||+||+++ + +.++..+++++
T Consensus 137 -------------~~v~~g~pi~~~-----~-~~~~~~~~l~~ 160 (163)
T cd07988 137 -------------KTVGIGPLFEPS-----G-DIEADLAAIRA 160 (163)
T ss_pred -------------EEEEECCcCcCC-----C-CHHHHHHHHHH
Confidence 479999999986 2 23455555554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-23 Score=200.60 Aligned_cols=153 Identities=27% Similarity=0.349 Sum_probs=124.3
Q ss_pred hHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCC--ccEEEec----ccchhhhhccCc
Q 043920 271 STVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP--IPTVTYS----VSRLSEIISPIK 344 (504)
Q Consensus 271 ~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~--~~~v~k~----~~~~~~~~~~~g 344 (504)
.+.+.+++..+++++|+|.|++| .++++|+||||+|++|++++...++.+ +.+++|+ .|.+++++...|
T Consensus 39 ~~~~~~~~~~~~r~~v~G~e~lp-----~~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~~~~~~ 113 (255)
T COG0204 39 FLVLLLLLLFGLRVEVEGLENLP-----KGGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLG 113 (255)
T ss_pred HHHHHHHHHhCceEEEEeeecCC-----CCCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHHHHHcC
Confidence 35567788999999999999998 568999999999999999999988776 7899997 677899999999
Q ss_pred eeEeecCChhh--HHHHHHH-hhcC-CEEEEcCceeeCC-Cccccccccc----cccCCeEEEEEEEccccCccccccCC
Q 043920 345 AVRLSRDRATD--ASTIKKL-LEEG-DLAMCPEGTTCRE-PFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARG 415 (504)
Q Consensus 345 ~i~i~R~~~~~--~~~~~~~-l~~G-~l~IFPEGTrs~~-~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~ 415 (504)
++++||++... +....+. .++| .++|||||||+++ ..+.+||.|+ .++++||+||++.|....+...
T Consensus 114 ~i~v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~~---- 189 (255)
T COG0204 114 AIPVDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPSL---- 189 (255)
T ss_pred eeEecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccCC----
Confidence 99999998753 4444444 4457 8999999999987 4599999994 5678999999999965433211
Q ss_pred CCCCccccccccCCCeEEEEEecCcCCcc
Q 043920 416 WKGMDPFYFFMNPCPAYEVTFLNKLPMEL 444 (504)
Q Consensus 416 ~~~~~~~~~~~~p~~~v~V~~l~pi~~~~ 444 (504)
.+.. +.+++++|++...
T Consensus 190 -----------~~~~-~~~~~~~pi~~~~ 206 (255)
T COG0204 190 -----------KKGK-VKVRIGPPIDISA 206 (255)
T ss_pred -----------Ccee-EEEEecCCcCccc
Confidence 1122 8899999998764
|
|
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=198.19 Aligned_cols=168 Identities=15% Similarity=0.181 Sum_probs=119.8
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCC-CChHHHHHHhh---CCCccEEEec-c---cchhhhhccCceeEeecCCh
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRT-LLDPIFLSVAL---GRPIPTVTYS-V---SRLSEIISPIKAVRLSRDRA 353 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S-~lD~~~l~~~~---~~~~~~v~k~-~---~~~~~~~~~~g~i~i~R~~~ 353 (504)
++++|+|.|++| .++|+|+||||+| ++|++++..++ +.++.+++|+ + |.++++ .++|+|.+.
T Consensus 8 ~~v~v~G~e~lp-----~~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~p~l~~~-----~i~v~r~~~ 77 (210)
T cd07986 8 LEVDVSGLENIP-----KDGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKIPELRDL-----FIPVDPLEG 77 (210)
T ss_pred EEEecCchhcCC-----CCCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhCcchHhh-----EEeccCCCC
Confidence 388899999998 7889999999987 59999987654 4567888887 3 334333 589988754
Q ss_pred h--------hHHHHHHHhhcC-CEEEEcCceeeCCCc------cccccccc----cccCCeEEEEEEEcccc-Ccccccc
Q 043920 354 T--------DASTIKKLLEEG-DLAMCPEGTTCREPF------LLRFSALF----AELTDELVPVAMVNRMS-MFHGTTA 413 (504)
Q Consensus 354 ~--------~~~~~~~~l~~G-~l~IFPEGTrs~~~~------l~~Fk~G~----~~~~~pIvPV~i~~~~~-~~~~~~~ 413 (504)
+ .++++.+.|++| +++|||||||+..+. +.+||+|+ .++++||+||+|.+... .+....
T Consensus 78 ~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~- 156 (210)
T cd07986 78 RAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAG- 156 (210)
T ss_pred cchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHH-
Confidence 2 267788899999 999999999997643 68999995 56799999999998432 111000
Q ss_pred CCCCCCc---ccc--ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHH
Q 043920 414 RGWKGMD---PFY--FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRV 462 (504)
Q Consensus 414 ~~~~~~~---~~~--~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~ 462 (504)
..|.-.. ..+ +...+++ ++|+||+||+++++. ..++.+++++.+|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-v~v~~g~pI~~~~~~-~~~~~~~l~~~~~~~ 208 (210)
T cd07986 157 LIHPTLRTLLLPRELLNKRGKT-IRIRVGRPIPPEELA-RFEDAEELADFLRLH 208 (210)
T ss_pred ccCHHHHHHHHHHHHHHhCCCE-EEEEeCCcCCHHHHh-cCCCHHHHHHHHHHh
Confidence 0000000 000 1223455 999999999987552 246899999999874
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=236.00 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=134.3
Q ss_pred cceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChhh
Q 043920 280 LGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRATD 355 (504)
Q Consensus 280 ~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~ 355 (504)
..++++++|.|++|. +++|+|+||||+|++|++++...+|+++.+++|+ .|+++++++..|+++|||+++..
T Consensus 437 ~~~~~~~~g~~~~~~----~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~ 512 (1140)
T PRK06814 437 AFYRVEVKGLENLQK----AGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNPMA 512 (1140)
T ss_pred HeEEEEEeCCccccc----cCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCChHH
Confidence 458999999999982 2357999999999999999999999889999997 57889999999999999999888
Q ss_pred HHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccC-ccccccCCCCCCccccccccCC
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSM-FHGTTARGWKGMDPFYFFMNPC 429 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~-~~~~~~~~~~~~~~~~~~~~p~ 429 (504)
++++.+.+++| +++|||||||+.++.+.+||+|+ .++++||+||+|.+.... +.... . . .....++
T Consensus 513 ~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~~~--~-~-----~~~~~~~ 584 (1140)
T PRK06814 513 TRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSRLK--N-Q-----VRRKWFP 584 (1140)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCcccccccccC--C-C-----cccccCC
Confidence 88888999999 99999999999999999999994 578999999999985432 22110 0 0 0111223
Q ss_pred CeEEEEEecCcCCcccc--CCCCCHHHHHHHHHHHHHHH
Q 043920 430 PAYEVTFLNKLPMELTC--GSGKSSHEVANYIQRVIAAT 466 (504)
Q Consensus 430 ~~v~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~i~~~ 466 (504)
+ ++|++++||++++.. ...+..+.+.+.+++.|.+.
T Consensus 585 ~-~~~~~~~~i~~~~~~~l~~~e~r~~~~~~l~~~~~~~ 622 (1140)
T PRK06814 585 K-VTVTILPPVKLAVDPELKGRERRSAAGAALYDIMSDM 622 (1140)
T ss_pred c-eEEEecCCcccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 4 999999999876431 11233445555666665554
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=225.88 Aligned_cols=185 Identities=16% Similarity=0.131 Sum_probs=138.7
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChhhHH
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRATDAS 357 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~~~ 357 (504)
++++++|.+++| .++|+|+||||+|++|++++..+++++..+++|+ .|+++++++..|+++|||++...++
T Consensus 14 ~~~~v~g~~~~~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~~~~~ 88 (718)
T PRK08043 14 YRVRVTGDTQAL-----KGERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKPMAIK 88 (718)
T ss_pred EEEEEEccccCC-----CCCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCHHHHH
Confidence 366688999988 6789999999999999999999998777788886 5778888889999999999988888
Q ss_pred HHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCccccccccCCCeE
Q 043920 358 TIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAY 432 (504)
Q Consensus 358 ~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 432 (504)
++.+.+++| +++|||||||+.++.+.+||+|+ .++++|||||+|.++....... +...+ ....+.. +
T Consensus 89 ~~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~~------~~~~~-~~~~~~~-i 160 (718)
T PRK08043 89 HLVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSR------LKGLV-KRRLFPQ-I 160 (718)
T ss_pred HHHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCcccc------cCCcc-ccccCCc-e
Confidence 888999999 99999999999999999999993 5689999999999854321111 00000 0111223 8
Q ss_pred EEEEecCcCCcccc--CCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 433 EVTFLNKLPMELTC--GSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 433 ~V~~l~pi~~~~~~--~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
.|+|++|++..... ...++.+.+++.+++.|.+++....-..|..|.
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 209 (718)
T PRK08043 161 TLHILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMAVRPRETLYEA 209 (718)
T ss_pred EEEecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHH
Confidence 89999997543111 012245678889999999986653333444443
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-22 Score=233.04 Aligned_cols=171 Identities=22% Similarity=0.280 Sum_probs=134.5
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChh
Q 043920 279 ALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRAT 354 (504)
Q Consensus 279 ~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~ 354 (504)
..+++++++|.|++| .++|+|++|||+|++|++++...+++++.+++|+ .|.++++++..|+|+|||++..
T Consensus 424 ~~~~~~~v~g~e~lp-----~~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~ 498 (1146)
T PRK08633 424 HTRYRLRVEGRENIP-----AKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGGSK 498 (1146)
T ss_pred HceEEEEEECCcCCC-----CCCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCChH
Confidence 456788999999998 6889999999999999999999999888999997 6788999999999999998865
Q ss_pred h-HHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEcc-ccCccccccCCCCCCcccccccc
Q 043920 355 D-ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNR-MSMFHGTTARGWKGMDPFYFFMN 427 (504)
Q Consensus 355 ~-~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~-~~~~~~~~~~~~~~~~~~~~~~~ 427 (504)
+ ++.+++.+++| +++|||||||+.++++.+||+|+ .++++|||||+|.+. ...+..... .++ ..+....
T Consensus 499 ~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~~~~~~-~~~---~~~~~~~ 574 (1146)
T PRK08633 499 ESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIFSRASG-KFL---WRWPTRI 574 (1146)
T ss_pred HHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEecccccccccccc-ccc---ccccCCC
Confidence 4 78888999999 99999999999999999999995 578999999999983 333221100 000 0011223
Q ss_pred CCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHH
Q 043920 428 PCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAA 465 (504)
Q Consensus 428 p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~ 465 (504)
+++ ++|+|++||+++ .+.+++.+.+++...+
T Consensus 575 ~~~-v~v~~~~pi~~~------~~~~~~~~~~~~l~~~ 605 (1146)
T PRK08633 575 PYP-VTVAFGKPMPAH------STAHEVKQAVFELSFD 605 (1146)
T ss_pred Cce-EEEEECCCcCcc------cCHHHHHHHHHHHHHH
Confidence 455 999999999874 3456666666554433
|
|
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=198.82 Aligned_cols=163 Identities=18% Similarity=0.134 Sum_probs=119.1
Q ss_pred hHHHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHH-----HhhC-CCccEEEec----ccchhhhh
Q 043920 271 STVYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLS-----VALG-RPIPTVTYS----VSRLSEII 340 (504)
Q Consensus 271 ~~~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~-----~~~~-~~~~~v~k~----~~~~~~~~ 340 (504)
+|++.....+|++++++|.|++| .++++|+++||+|.+|+.+++ ..++ +++.+++|+ +|.+++++
T Consensus 76 ~i~~~~~~~~~~~v~v~g~e~l~-----~~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g~~~ 150 (315)
T PLN02783 76 FICKYACAYFPVRLHVEDEEAFD-----PNRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLRHIW 150 (315)
T ss_pred HHHHHHHHhcCeEEEEEchhhCC-----CCCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHHHHH
Confidence 46677777999999999999998 688999999999999998743 2355 578888886 68899999
Q ss_pred ccCceeEeecCChhhHHHHHHHhhcC-CEEEEcCceee-----CC--Cccccccccc----cccCCeEEEEEEEccccC-
Q 043920 341 SPIKAVRLSRDRATDASTIKKLLEEG-DLAMCPEGTTC-----RE--PFLLRFSALF----AELTDELVPVAMVNRMSM- 407 (504)
Q Consensus 341 ~~~g~i~i~R~~~~~~~~~~~~l~~G-~l~IFPEGTrs-----~~--~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~- 407 (504)
.++|.++++|++ +.+.|++| +++|||||||+ .+ ..+++||+|| .++|+||+||++.+....
T Consensus 151 ~~~G~ipv~R~~------~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~ 224 (315)
T PLN02783 151 TWLGLDPASRKN------FTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAY 224 (315)
T ss_pred HHcCCeEEcHHH------HHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhh
Confidence 999999999964 45678899 99999999984 22 2357899995 678999999999995332
Q ss_pred --cccc-cc-----CCCCCCc-ccc---ccccCC-CeEEEEEecCcCCcc
Q 043920 408 --FHGT-TA-----RGWKGMD-PFY---FFMNPC-PAYEVTFLNKLPMEL 444 (504)
Q Consensus 408 --~~~~-~~-----~~~~~~~-~~~---~~~~p~-~~v~V~~l~pi~~~~ 444 (504)
|... .. ....+.. .+| ..+.|. ..+++.+|+||+.+.
T Consensus 225 ~~~~~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~ 274 (315)
T PLN02783 225 KWWKPGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKK 274 (315)
T ss_pred hhhcCCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCC
Confidence 2111 00 0000000 011 122233 359999999999864
|
|
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=187.77 Aligned_cols=175 Identities=21% Similarity=0.227 Sum_probs=123.6
Q ss_pred eEE-EEcCCCCCCCCCCCCCCcEEEEecCCCCC-hHHHHHHh-----hCCCccEEEec----ccchhhhhccCceeEeec
Q 043920 282 VRV-IVKGTPPPAAKKSTGQTGVLFVCSHRTLL-DPIFLSVA-----LGRPIPTVTYS----VSRLSEIISPIKAVRLSR 350 (504)
Q Consensus 282 i~v-~v~G~~~~~~~~~~~~~~~viVaNH~S~l-D~~~l~~~-----~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R 350 (504)
+++ +|+|.|++| .++++|+|+||+|++ |++++..+ .++++.+++++ ++.+++++..+|+++++|
T Consensus 5 ~~~~~v~g~e~lp-----~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r 79 (212)
T cd07987 5 FRVYEVRGLENIP-----DEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSR 79 (212)
T ss_pred eeeEEEeccccCC-----CCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCcccCH
Confidence 456 899999998 678999999999999 99999876 23567788765 566788999999999887
Q ss_pred CChhhHHHHHHHhhcC-CEEEEcCceeeCC-------Cccccccccc----cccCCeEEEEEEEccccCccc-cccCCCC
Q 043920 351 DRATDASTIKKLLEEG-DLAMCPEGTTCRE-------PFLLRFSALF----AELTDELVPVAMVNRMSMFHG-TTARGWK 417 (504)
Q Consensus 351 ~~~~~~~~~~~~l~~G-~l~IFPEGTrs~~-------~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~-~~~~~~~ 417 (504)
+ .+.+.|++| +++|||||||+.. ..+++||+|| .++++||+||++.|....+.. .....+.
T Consensus 80 ~------~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~~~ 153 (212)
T cd07987 80 E------NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPV 153 (212)
T ss_pred H------HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCCCc
Confidence 4 466788899 9999999999732 2488999995 578999999999995543321 1000000
Q ss_pred CCccccccccCC-CeEEEEEecCcCCcccc---CCCCCHHHHHHHHHHHHHHHc
Q 043920 418 GMDPFYFFMNPC-PAYEVTFLNKLPMELTC---GSGKSSHEVANYIQRVIAATL 467 (504)
Q Consensus 418 ~~~~~~~~~~p~-~~v~V~~l~pi~~~~~~---~~~~~~~~la~~v~~~i~~~l 467 (504)
.....+.+..|. ..+++.||+||+..... .+.++.+++.++++++|.+.+
T Consensus 154 ~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 154 GKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred eeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 011112233343 24999999999875321 123345567777777776653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.5e-22 Score=187.08 Aligned_cols=145 Identities=22% Similarity=0.282 Sum_probs=104.0
Q ss_pred CCcEEEEecCCCCChHHHHHHhhC---CCccEEEec----ccchhhhhccCceeEeecCChhh-------HHHHHHHhhc
Q 043920 300 QTGVLFVCSHRTLLDPIFLSVALG---RPIPTVTYS----VSRLSEIISPIKAVRLSRDRATD-------ASTIKKLLEE 365 (504)
Q Consensus 300 ~~~~viVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~-------~~~~~~~l~~ 365 (504)
++|+|+||||+|++|++++..++. .++.+++++ .+.++++++..|+++|+|++... .+.+.+.+++
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~ 100 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKN 100 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhC
Confidence 379999999999999999988763 356777765 56788999999999999986421 2346778899
Q ss_pred C-CEEEEcCceeeCCCccccccccc----ccc-------CCeEEEEEEEccccC----ccccccCCCC------CCcccc
Q 043920 366 G-DLAMCPEGTTCREPFLLRFSALF----AEL-------TDELVPVAMVNRMSM----FHGTTARGWK------GMDPFY 423 (504)
Q Consensus 366 G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~-------~~pIvPV~i~~~~~~----~~~~~~~~~~------~~~~~~ 423 (504)
| +++||||||||+++.+.+||+|+ .++ ++|||||+|+|.... +.....+..+ .....+
T Consensus 101 g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 180 (205)
T cd07993 101 GQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVLEEELYAEELLGPPKPKESLSGLLGAS 180 (205)
T ss_pred CceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCcccchHHHHHHHcCCCCCCccHHHHHHHH
Confidence 9 99999999999999999999994 233 899999999995431 0000001000 011111
Q ss_pred -ccccCCCeEEEEEecCcCCcc
Q 043920 424 -FFMNPCPAYEVTFLNKLPMEL 444 (504)
Q Consensus 424 -~~~~p~~~v~V~~l~pi~~~~ 444 (504)
.+..+...++|+|++||+.++
T Consensus 181 ~~l~~~~g~v~v~~~~Pi~~~~ 202 (205)
T cd07993 181 KILRENFGRIRVDFGEPISLRE 202 (205)
T ss_pred HHhhccCCeEEEECCCCcCHHH
Confidence 233433349999999998763
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=184.49 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=99.0
Q ss_pred HhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCC---ccEEEec----ccchhhhhccCceeE
Q 043920 275 YAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP---IPTVTYS----VSRLSEIISPIKAVR 347 (504)
Q Consensus 275 ~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~~~~~~~~g~i~ 347 (504)
.+.++.|++++|+|.|+++ .++++|++|||||++|++++..++++. +.+++|+ +|.+|+.+..++.++
T Consensus 66 ~~~~~~g~k~~V~G~e~l~-----~~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~if 140 (301)
T PRK14014 66 ILRLLPRTQWDVEGLEGLS-----KKGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDFPF 140 (301)
T ss_pred HHHHhCCcEEEEEcCCCCC-----CCCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCCeE
Confidence 3445889999999999997 678999999999999999999888653 4688886 788999999999999
Q ss_pred eecCChhh-----------HHHH---HHHhh-cC-CEEEEcCceeeCC----------Ccccccccc-c---ccc----C
Q 043920 348 LSRDRATD-----------ASTI---KKLLE-EG-DLAMCPEGTTCRE----------PFLLRFSAL-F---AEL----T 393 (504)
Q Consensus 348 i~R~~~~~-----------~~~~---~~~l~-~G-~l~IFPEGTrs~~----------~~l~~Fk~G-~---~~~----~ 393 (504)
++|.+... .+++ .+.++ +| +++|||||||+.. +.+++||+| | .++ -
T Consensus 141 i~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~ 220 (301)
T PRK14014 141 MKRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQF 220 (301)
T ss_pred EeccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccC
Confidence 99975422 2222 23333 36 8999999999633 379999999 4 233 2
Q ss_pred CeEEEEEEEccc
Q 043920 394 DELVPVAMVNRM 405 (504)
Q Consensus 394 ~pIvPV~i~~~~ 405 (504)
.+|+||+|.|..
T Consensus 221 ~~I~dvti~y~~ 232 (301)
T PRK14014 221 DGLLDVTIVYPD 232 (301)
T ss_pred CEEEEEEEEeCC
Confidence 699999999954
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-20 Score=175.05 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=102.9
Q ss_pred cCCCHHHHHHHHHHHcchhhhcccCHHHH---HHHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeC-Ceeee
Q 043920 86 VGLRVTDIESVARAVLPKFYASDLHPESW---RVFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYK-GRATG 161 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~-g~~tG 161 (504)
.|++.++++++.+.. .++|++. ++|+++|..+||||+++.++++++++ +|+++++|+++++++ |.+||
T Consensus 53 ~g~~~~~i~~~~~~i-------~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG 124 (203)
T TIGR02137 53 HGLKLGDIQEVIATL-------KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVG 124 (203)
T ss_pred CCCCHHHHHHHHHhC-------CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeEC
Confidence 499999997765542 1566554 47777775567999999999999999 999999999999988 99999
Q ss_pred eEeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 162 LVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 162 ~i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
... + .+++|...++++.....-.++||||.||+||++.|+.++++++++.+++.|.
T Consensus 125 ~~~---~-~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~ 180 (203)
T TIGR02137 125 YQL---R-QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 180 (203)
T ss_pred eee---c-CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCC
Confidence 765 2 5678999988874332246799999999999999999999999999998877
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-20 Score=194.57 Aligned_cols=172 Identities=26% Similarity=0.306 Sum_probs=129.0
Q ss_pred ceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043920 20 KHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARA 99 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 99 (504)
....+||+||||+++||+++++.+..++ .+.+.. ..| .++. .+...+|+.+.. ..+.+.+.+
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~--~p~~~~----~l~-~~~~----~g~a~lK~~~a~-~~~~d~~~l------ 71 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLRR--NPLALL----RLP-LWLL----RGKAALKRRLAR-RVDLDVATL------ 71 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHHh--ChHHHH----HHH-HHHH----hcHHHHHHHHHh-hcCCChhhC------
Confidence 3588999999999999999998866543 343322 111 2211 222336665554 334443332
Q ss_pred HcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC-cEEEeeeEEEeCCeeeeeEeCCCCCCchhH
Q 043920 100 VLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA-DLVLGTEIATYKGRATGLVRDPGVLVGNKK 174 (504)
Q Consensus 100 ~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-d~vigt~l~~~~g~~tG~i~g~~~l~g~~K 174 (504)
+ ++|++.+ +|+++|+.+ ++|||++.++++++++ +|+ |.++|++.. .|| +|++|
T Consensus 72 --p------~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGlFd~Vigsd~~------------~~~-kg~~K 129 (479)
T PRK08238 72 --P------YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGLFDGVFASDGT------------TNL-KGAAK 129 (479)
T ss_pred --C------CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCEEEeCCCc------------ccc-CCchH
Confidence 1 4555544 788999887 5899999999999999 995 999999742 246 88999
Q ss_pred HHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-eeCC
Q 043920 175 ADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FHDG 233 (504)
Q Consensus 175 v~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~ 233 (504)
++++++++++++. ..+|||.+|+|+++.|++|++|||++++++.|+ ++||++. |...
T Consensus 130 ~~~l~~~l~~~~~-~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~-~~~~~~~~~~~~ 187 (479)
T PRK08238 130 AAALVEAFGERGF-DYAGNSAADLPVWAAARRAIVVGASPGVARAAR-ALGPVERVFPPR 187 (479)
T ss_pred HHHHHHHhCccCe-eEecCCHHHHHHHHhCCCeEEECCCHHHHHHHH-HcCCcceecCCC
Confidence 9999999987654 468999999999999999999999999999999 9999997 7543
|
|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-20 Score=162.62 Aligned_cols=117 Identities=25% Similarity=0.388 Sum_probs=102.7
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChhh-
Q 043920 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRATD- 355 (504)
Q Consensus 281 Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~- 355 (504)
|++++++|.+++| +++|+|+++||+|++|.+++...+++++.++++. .|.+++++...|+++|+|++..+
T Consensus 1 ~~~~~v~g~~~lp-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~ 75 (130)
T TIGR00530 1 GLKVEVVGPENLP-----AKSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAI 75 (130)
T ss_pred CcEEEEECcccCC-----CCCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHH
Confidence 6899999999998 6899999999999999999988887778888885 57788889899999999977332
Q ss_pred ---HHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEE
Q 043920 356 ---ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMV 402 (504)
Q Consensus 356 ---~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~ 402 (504)
++.+.+.+++| +++|||||+++.++.+.+|++|+ .++++||+||.++
T Consensus 76 ~~~~~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~~ 130 (130)
T TIGR00530 76 ATALKAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVLS 130 (130)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEeC
Confidence 56778889999 99999999999889999999994 5679999999874
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=166.99 Aligned_cols=162 Identities=26% Similarity=0.349 Sum_probs=129.5
Q ss_pred hcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh----CCCccEEEecccc-hhhhhccCceeEeecCCh
Q 043920 279 ALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL----GRPIPTVTYSVSR-LSEIISPIKAVRLSRDRA 353 (504)
Q Consensus 279 ~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~----~~~~~~v~k~~~~-~~~~~~~~g~i~i~R~~~ 353 (504)
+.+++++++|.+++| .++|+|+++||+|++|.+++...+ ..++.++++.... ..+++++.|.++++|.+.
T Consensus 9 ~~~~~~~~~g~~~~p-----~~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~g~~~i~r~~~ 83 (187)
T cd06551 9 FGFVRLEVKGPPPPP-----GGGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLERYPFFTRLGAFSVDRDSP 83 (187)
T ss_pred cceEEEEEeccccCC-----CCCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhhhChHHhhcCeEEecCCCh
Confidence 468899999999998 788999999999999999998876 3667777776322 556677779999998764
Q ss_pred ----hhHHHHHHHhhc-C-CEEEEcCceeeCCC-ccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 354 ----TDASTIKKLLEE-G-DLAMCPEGTTCREP-FLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 354 ----~~~~~~~~~l~~-G-~l~IFPEGTrs~~~-~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
..++.+.+.+++ | +++||||||++++. .+.+|++|+ .+.++||+||++.+....+
T Consensus 84 ~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~-------------- 149 (187)
T cd06551 84 RSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF-------------- 149 (187)
T ss_pred hhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc--------------
Confidence 337788889999 8 89999999999876 899999995 4568999999999854321
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHc
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATL 467 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l 467 (504)
.++..++|.+++||..+ +..+.+++++++.+.|.+.+
T Consensus 150 ----~~~~~~~i~~~~pi~~~----~~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 150 ----EQFPEIFVRIGPPIPYA----ETALGEELAAELANRLTRLL 186 (187)
T ss_pred ----CCCCcEEEEECCCcccc----ccccHHHHHHHHHHHHHHhc
Confidence 12234899999999987 35567888888888777654
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-20 Score=203.23 Aligned_cols=183 Identities=17% Similarity=0.135 Sum_probs=123.8
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCC----CccEEEec---ccchhhhhccCceeEeecCCh
Q 043920 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGR----PIPTVTYS---VSRLSEIISPIKAVRLSRDRA 353 (504)
Q Consensus 281 Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~----~~~~v~k~---~~~~~~~~~~~g~i~i~R~~~ 353 (504)
++.+.+.+.+++... ..++|+|+|+||+|++|++++..++.+ +..++++. +|.+|++++..|++||+|+..
T Consensus 249 ~v~v~~~~~~~lr~~--~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~L~~~~lG~llr~~Ga~fIrR~~~ 326 (783)
T PRK03355 249 EIDYDEYELAALRAL--LEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGINLSFGPMGPIMRRSGMIFIRRNIG 326 (783)
T ss_pred cceeCHHHHHHHHhc--cCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHHhccHHHHHHHHHcCcEEecCCCC
Confidence 667777776544211 157899999999999999999887753 34455564 688999999999999999763
Q ss_pred hh------HHHHHHH-hhcC-CEEEEcCceeeCCCccccccccc-----------cccCCeEEEEEEEccccCccccc--
Q 043920 354 TD------ASTIKKL-LEEG-DLAMCPEGTTCREPFLLRFSALF-----------AELTDELVPVAMVNRMSMFHGTT-- 412 (504)
Q Consensus 354 ~~------~~~~~~~-l~~G-~l~IFPEGTrs~~~~l~~Fk~G~-----------~~~~~pIvPV~i~~~~~~~~~~~-- 412 (504)
.. ++...+. +++| ++.+|||||||+++.+++||.|. ...++|||||+|.|.+.+-.+..
T Consensus 327 ~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~Yd~v~E~~~y~~ 406 (783)
T PRK03355 327 DDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRSDDVLLQPVSISFDQLHEIGEYAA 406 (783)
T ss_pred chHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhcccCCCEEEEEEEEecccccchhHHH
Confidence 22 2333333 4678 99999999999999999999994 14689999999998554321110
Q ss_pred --cCCCCCCccccccc---------cCCCeEEEEEecCcCCccccCCC------------CCHHHHHHHHHHHHHHH
Q 043920 413 --ARGWKGMDPFYFFM---------NPCPAYEVTFLNKLPMELTCGSG------------KSSHEVANYIQRVIAAT 466 (504)
Q Consensus 413 --~~~~~~~~~~~~~~---------~p~~~v~V~~l~pi~~~~~~~~~------------~~~~~la~~v~~~i~~~ 466 (504)
.+..+..+.++.++ +.|. +.|+|++||+.+++.++. ...+.++.+|...|.+.
T Consensus 407 e~~G~~k~~esl~~~~~~~~~l~~~~~G~-i~V~fGePisl~~~~~~~~~~~~~~~~~~~~~~~~la~~Vm~~In~~ 482 (783)
T PRK03355 407 EARGGEKTPEGLRWLYNYIKAQGERNYGK-IYVRFGEPVSMRQYLGAPHGPLTQDPDAKRLALQKMAFEVAWRINQV 482 (783)
T ss_pred HhcCCCcccccHHHHHHHHHHhccCCcee-EEEEECCCCCHHHhhccccccccccchhhHHHHHHHHHHHHHHHHhc
Confidence 01112222222111 2354 999999999998763211 12345667776666664
|
|
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-19 Score=170.57 Aligned_cols=171 Identities=12% Similarity=0.114 Sum_probs=121.4
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec-----------ccchhhhhccCceeEeecCCh----
Q 043920 289 TPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS-----------VSRLSEIISPIKAVRLSRDRA---- 353 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~-----------~~~~~~~~~~~g~i~i~R~~~---- 353 (504)
.|++| .++++|++|||+|++|++++..+++++..+++++ .|.+++++...|.++|+|++.
T Consensus 15 ~e~ip-----~~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~ 89 (235)
T cd07985 15 EEQLA-----QGHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDP 89 (235)
T ss_pred HHhcc-----CCCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccc
Confidence 36777 6789999999999999999999998777776665 355677888889999998761
Q ss_pred ------------hhHHHHHHHhhcC-C-EEEEcCceeeCCCcccccccc-c------------cccCCe--EEEEEEEcc
Q 043920 354 ------------TDASTIKKLLEEG-D-LAMCPEGTTCREPFLLRFSAL-F------------AELTDE--LVPVAMVNR 404 (504)
Q Consensus 354 ------------~~~~~~~~~l~~G-~-l~IFPEGTrs~~~~l~~Fk~G-~------------~~~~~p--IvPV~i~~~ 404 (504)
.+++.+.+.|++| . ++|||||||++.+...+.++| | .++++| |+|++|.++
T Consensus 90 P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~~y 169 (235)
T cd07985 90 PELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALLTY 169 (235)
T ss_pred hhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEEee
Confidence 2367777889998 5 789999999964444455554 2 457899 999999976
Q ss_pred ccCccccccCCCCCCccccccccCCCeEEEEEecCcCCcccc----CCCCCHHHHHHHHHHHHHHHcC
Q 043920 405 MSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTC----GSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~----~~~~~~~~la~~v~~~i~~~l~ 468 (504)
..++.+.+... ...+- ...++. .+.|.+++||+.++.. ++.+..+++++.+.+.|.+...
T Consensus 170 di~Ppp~~v~~-~ige~--r~~~f~-~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 170 DIMPPPKQVEK-EIGEK--RAVAFT-GVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred cccCCCccccc-ccccc--cccccc-ceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 66655432100 00000 122333 3999999999987542 1235567788888888877653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-19 Score=168.20 Aligned_cols=172 Identities=15% Similarity=0.202 Sum_probs=122.1
Q ss_pred hhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec---ccchhhhhccCceeEeecCCh-
Q 043920 278 WALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS---VSRLSEIISPIKAVRLSRDRA- 353 (504)
Q Consensus 278 ~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~---~~~~~~~~~~~g~i~i~R~~~- 353 (504)
+.++++++++|.|+++... ..++|+|+++||+|.+|++++... +.++.+++++ .+.+++++..+|.++|+|++.
T Consensus 4 ~~~~~~~~v~g~e~l~~~~-~~~~~~I~~~~H~s~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~~i~r~~~~ 81 (189)
T cd07983 4 LYLTLRWRVIGDESADALI-AQGEPVILAFWHGRLLLMPYLFRR-RKRIAALISRSKDGEIIARVLERLGIRVVRGSSSR 81 (189)
T ss_pred eeEeEeEEEeCchhhhhhc-cCCCCEEEEEeCchHHHhHHHhcc-CCCeEEEEecCcCHHHHHHHHHHhCCCEEEcCCCC
Confidence 3678899999999985100 026799999999999999988765 5677778776 455777888899999998643
Q ss_pred ---hhHHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCcccccc
Q 043920 354 ---TDASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFF 425 (504)
Q Consensus 354 ---~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~ 425 (504)
..++.+.+.+++| +++|||||||+. ..+|++|+ .++++||+||++.+...+.... | .. ..+
T Consensus 82 ~~~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~~~----~--~~--~~~ 150 (189)
T cd07983 82 GGAAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRLKS----W--DR--FII 150 (189)
T ss_pred cHHHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEeccC----c--cc--ccc
Confidence 3377788899999 999999999864 35799994 5689999999998854322111 1 00 012
Q ss_pred ccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHc
Q 043920 426 MNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATL 467 (504)
Q Consensus 426 ~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l 467 (504)
..+...++|+|++||+++. ..+ ++..+++.+.+.+.|
T Consensus 151 p~~~~~~~v~~~~pi~~~~----~~~-~~~~~~~~~~~~~~~ 187 (189)
T cd07983 151 PKPFSRVVIVFGEPIHVPP----DAD-EEELEEYRLELEAAL 187 (189)
T ss_pred CCCCcceEEEEeCCEeeCC----CCC-HHHHHHHHHHHHHHh
Confidence 2342349999999998862 334 455555555555554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=174.68 Aligned_cols=187 Identities=20% Similarity=0.190 Sum_probs=137.1
Q ss_pred ccCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH--HHHHHHHHhcCCCHH
Q 043920 14 SSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG--IQVLIFASFVGLRVT 91 (504)
Q Consensus 14 ~~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~ 91 (504)
.+..+..++++|||||||+..++...+.+.. +....... ....++.+..++. +++ ....++|.+.+
T Consensus 104 ~~~~~~~~LvvfDmDGTLI~~e~i~eia~~~----g~~~~v~~-------it~~~m~Geldf~esl~~-rv~~l~g~~~~ 171 (322)
T PRK11133 104 IPHLRTPGLLVMDMDSTAIQIECIDEIAKLA----GTGEEVAE-------VTERAMRGELDFEASLRQ-RVATLKGADAN 171 (322)
T ss_pred cccccCCCEEEEECCCCCcchHHHHHHHHHh----CCchHHHH-------HHHHHHcCCcCHHHHHHH-HHHHhCCCCHH
Confidence 4456688999999999999887754444322 11111110 0001111222221 333 33467888877
Q ss_pred HHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCC
Q 043920 92 DIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPG 167 (504)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~ 167 (504)
.++++.++ .+ ++|.+ ++.++++|..+ |+|+++..+++++.++ +|+++++++.+++.+|++||.+.|..
T Consensus 172 il~~v~~~-l~------l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~i 243 (322)
T PRK11133 172 ILQQVREN-LP------LMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDI 243 (322)
T ss_pred HHHHHHHh-CC------CChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCcc
Confidence 66655433 22 45655 55888999765 6999999999999999 99999999999999999999999864
Q ss_pred CCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 168 VLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 168 ~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
+ .+..|.+.++++..+.++ .+++|||.||++|++.||.++++|+++++++.|.
T Consensus 244 v-~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad 300 (322)
T PRK11133 244 V-DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQ 300 (322)
T ss_pred C-CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 4 788999999998765543 5699999999999999999999999999999888
|
|
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-20 Score=166.21 Aligned_cols=115 Identities=28% Similarity=0.390 Sum_probs=64.2
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhC----CCccEEEec----ccchhhhhccCceeEeecCChh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALG----RPIPTVTYS----VSRLSEIISPIKAVRLSRDRAT 354 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~ 354 (504)
+++|+|.|++| +++++|++|||+|++|.+++..++. +.+.++++. .|.++.++...|.++++|++..
T Consensus 1 ~v~v~g~e~l~-----~~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~ 75 (132)
T PF01553_consen 1 KVEVEGLENLP-----KGGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRK 75 (132)
T ss_dssp -----HHHHHH-----TT-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHH
T ss_pred CCccCccccCC-----CCCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeeccc
Confidence 57899999998 6799999999999999999999883 345667765 5788999999999999994332
Q ss_pred h----HHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEE
Q 043920 355 D----ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMV 402 (504)
Q Consensus 355 ~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~ 402 (504)
. ++.+.+.+++| .++||||||++++..+++|++|+ .++++||+||+|+
T Consensus 76 ~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 76 KNRKALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred ccchhHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 2 67778889998 99999999999998889999994 4669999999985
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=158.91 Aligned_cols=166 Identities=22% Similarity=0.226 Sum_probs=114.7
Q ss_pred EEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHHHHHHHHH
Q 043920 22 TVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDIESVARAV 100 (504)
Q Consensus 22 ~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l~~~~~~~ 100 (504)
+++|||||||++.+|.+.++...... ......+ . . .+..+..+.. .-......+++...+++. +++
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~-~~~~~~~--~----~---~~~~g~i~~~~~~~~~~~~~~~~~~~~~~---~~~ 67 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGT-NDEVIEL--T----R---LAPSGRISFEDALGRRLALLHRSRSEEVA---KEF 67 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCC-hHHHHHH--H----H---HHHCCCCCHHHHHHHHHHHhCCCCHHHHH---HHH
Confidence 48999999999999998887754310 0111111 0 1 1111122221 122344567888765543 334
Q ss_pred cchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEe-CCeeeeeEeC-CCCCCchhH
Q 043920 101 LPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATY-KGRATGLVRD-PGVLVGNKK 174 (504)
Q Consensus 101 ~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~-~g~~tG~i~g-~~~l~g~~K 174 (504)
+.+.+. ++|.+ ++.++++|+.+ |+|+|++.+++++++. +|+++++++++.++ ||.+||.+.+ +++ .+.+|
T Consensus 68 ~~~~~~--~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~K 143 (177)
T TIGR01488 68 LARQVA--LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNP-EGECK 143 (177)
T ss_pred HHhcCC--cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccC-CcchH
Confidence 333222 34444 55788899776 6899999999999999 99999999999995 8999998877 444 89999
Q ss_pred HHHHHHHhCCCCC----eEEEeCCCCCHHHHhhc
Q 043920 175 ADALLKAFGETQP----EIGLGDRQTDIPFMALC 204 (504)
Q Consensus 175 v~~l~~~~~~~~~----~~aygDS~~DlpmL~~a 204 (504)
.+.++++.++.++ .++||||.+|++|++.|
T Consensus 144 ~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 144 GKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9999998765443 46999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-18 Score=190.31 Aligned_cols=161 Identities=18% Similarity=0.149 Sum_probs=111.5
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCC---ccEEEec----ccchhhhhccCceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP---IPTVTYS----VSRLSEIISPIKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~---~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~ 355 (504)
.++|.|.|+++... ..+.|+|+|+||+|++|++++..++.+. +.++++. +|+++++++..|++||+|+....
T Consensus 285 ~i~V~g~e~L~~~~-~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~~p~lg~llr~~GaffIrR~~~~~ 363 (818)
T PRK04974 285 GINVHNAERVRQLA-QDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 363 (818)
T ss_pred ceEEcchhhhhhcc-cCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhcchHHHHHHHHCCceEeeCCCCch
Confidence 36688999986210 0234899999999999999998776543 4566654 68899999999999999985422
Q ss_pred -H------HHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cc-------cCCeEEEEEEEccccCcc----ccc
Q 043920 356 -A------STIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AE-------LTDELVPVAMVNRMSMFH----GTT 412 (504)
Q Consensus 356 -~------~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~-------~~~pIvPV~i~~~~~~~~----~~~ 412 (504)
+ +.+.+.+++| ++.||||||||++|.+++||.|. .+ ..++||||+|.|...+-. ...
T Consensus 364 ~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~dv~IVPVsIsYekv~E~~~y~~el 443 (818)
T PRK04974 364 KLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRPITLVPVYIGYEHVMEVGTYAKEL 443 (818)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCCcEEEEEEEeccchhhhHHHHHHh
Confidence 1 1244577889 99999999999999999999993 22 247999999988542111 000
Q ss_pred cCCCCCCcccc-------ccccCCCeEEEEEecCcCCccc
Q 043920 413 ARGWKGMDPFY-------FFMNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 413 ~~~~~~~~~~~-------~~~~p~~~v~V~~l~pi~~~~~ 445 (504)
.+..+..+.+| ...+.|. ++|+|++||+.+++
T Consensus 444 ~G~~K~kEsl~~il~~i~~~~~~G~-v~V~FGePisl~~~ 482 (818)
T PRK04974 444 RGAPKEKESLFQVLRGIRKLRNFGQ-GYVNFGEPIPLNDY 482 (818)
T ss_pred cCCCCcCcCHHHHHHHHhhcCCCce-EEEEeCCCccHHHH
Confidence 01111122222 1123455 99999999986653
|
|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-18 Score=189.68 Aligned_cols=161 Identities=17% Similarity=0.109 Sum_probs=110.6
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCC---ccEEE-ec---ccchhhhhccCceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP---IPTVT-YS---VSRLSEIISPIKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~---~~~v~-k~---~~~~~~~~~~~g~i~i~R~~~~~ 355 (504)
.++|.|.|+++... .++.|+|+|+||+|++|++++..++.+. ...++ +. +|.++++++..|++||+|+....
T Consensus 275 ~v~V~g~E~l~~~~-~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~~p~~g~llr~~GaffIrR~~~~~ 353 (799)
T TIGR03703 275 GINVNNADRVRKLA-QKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLNFWPAGPIFRRGGAFFIRRSFKGN 353 (799)
T ss_pred ceEEechhhccccc-CCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhccHHHHHHHHHCCceEeecCCCcc
Confidence 46678999886210 0234999999999999999998776432 23343 32 68889999999999999975432
Q ss_pred ------H-HHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cc-------cCCeEEEEEEEccccCcc----ccc
Q 043920 356 ------A-STIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AE-------LTDELVPVAMVNRMSMFH----GTT 412 (504)
Q Consensus 356 ------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~-------~~~pIvPV~i~~~~~~~~----~~~ 412 (504)
+ +.+.+.+++| ++.||||||||++|.+++||.|+ .+ .+++||||+|.|...+-. ...
T Consensus 354 ~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~v~IVPVsI~Yekv~E~~~y~~El 433 (799)
T TIGR03703 354 KLYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRPITLVPVYIGYEHVMEVATYLKEL 433 (799)
T ss_pred hhHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCCcEEEEEEEecccccchhHHHHHh
Confidence 2 3345678899 99999999999999999999994 12 279999999988543211 000
Q ss_pred cCCCCCCcc-------ccccccCCCeEEEEEecCcCCccc
Q 043920 413 ARGWKGMDP-------FYFFMNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 413 ~~~~~~~~~-------~~~~~~p~~~v~V~~l~pi~~~~~ 445 (504)
.+..+..+. ...+.+.|. ++|+|++||+.+++
T Consensus 434 ~G~~K~kEsl~~~l~~~~~l~~~G~-i~V~FGePIsl~~~ 472 (799)
T TIGR03703 434 RGKRKEKESVFGVLKTLRKLRNFGQ-GYVNFGEPINLNDY 472 (799)
T ss_pred cCCCccccCHHHHHHHHhccCCCce-EEEEeCCCccHHHH
Confidence 011111111 112234566 99999999987654
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.9e-18 Score=157.38 Aligned_cols=151 Identities=28% Similarity=0.359 Sum_probs=121.6
Q ss_pred hhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCC
Q 043920 277 FWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDR 352 (504)
Q Consensus 277 ~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~ 352 (504)
+.+++.+++++|.++++ .++++|+++||.|++|.+++....+.+..++++. .+.+..++...|.++++|..
T Consensus 5 ~~~~~~~v~v~~~~~~~-----~~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~ 79 (184)
T cd07989 5 LRLLGVRVRVEGLENLP-----PKGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGN 79 (184)
T ss_pred EEeeceEEEEEccccCC-----CCCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEecCC
Confidence 33467899999999986 6789999999999999998877765667788775 47788888889999999876
Q ss_pred h----hhHHHHHHHhhcC-CEEEEcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 353 A----TDASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 353 ~----~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
. ..++++.+.+++| .++|||||++++++...+|++|+ .+.++||+||.+.+....+...
T Consensus 80 ~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~~------------ 147 (184)
T cd07989 80 GRSAREALREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPKG------------ 147 (184)
T ss_pred chhHHHHHHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcCC------------
Confidence 3 3477888889999 89999999999888899999994 4579999999999954322211
Q ss_pred ccccCCCeEEEEEecCcCCcc
Q 043920 424 FFMNPCPAYEVTFLNKLPMEL 444 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~ 444 (504)
.+..++..++|++++||+++.
T Consensus 148 ~~~~~~~~~~i~~~~pi~~~~ 168 (184)
T cd07989 148 KKLPRPGRVTVRIGEPIPPEG 168 (184)
T ss_pred CCcCCCCcEEEEEcCCcChhh
Confidence 234456569999999999874
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-16 Score=151.70 Aligned_cols=184 Identities=21% Similarity=0.218 Sum_probs=127.7
Q ss_pred CcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHHHHH
Q 043920 18 REKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDIESV 96 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l~~~ 96 (504)
+..++++|||||||+++++...++... +....... ....+..+..... ..+.....+.+.+.+.++++
T Consensus 12 ~~~k~iiFD~DGTL~~~~~~~~l~~~~----g~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (219)
T TIGR00338 12 RSKKLVVFDMDSTLINAETIDEIAKIA----GVEEEVSE-------ITERAMRGELDFKASLRERVALLKGLPVELLKEV 80 (219)
T ss_pred ccCCEEEEeCcccCCCchHHHHHHHHh----CCHHHHHH-------HHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 346799999999999998754433321 11111000 0001111111111 12223334677777766655
Q ss_pred HHHHcchhhhcccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCch
Q 043920 97 ARAVLPKFYASDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGN 172 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~ 172 (504)
.+.. .++| +.++.++++|.++ |||++.+.+++++++. +|+++++++++.+++|.++|.+.+..+ .+.
T Consensus 81 ~~~~-------~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 151 (219)
T TIGR00338 81 RENL-------PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIV-DAS 151 (219)
T ss_pred HhcC-------CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCccc-CCc
Confidence 4432 1344 4456788899776 6999999999999999 999999999999999999999888754 566
Q ss_pred hHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 173 KKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.|.+.++.+....++ .+++|||.+|+++++.|+.++++|+++.+++.|.
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 688888876554433 5689999999999999999999999999987776
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=148.97 Aligned_cols=183 Identities=17% Similarity=0.174 Sum_probs=115.4
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCC----CHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGL----RVTDI 93 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~----~~~~l 93 (504)
..++++|||||||+++++.+.++.... +........ .. .+..+..... ........+.+. ..+++
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~~---~~~~~~~~~-----~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRRL---ETCGLAKKN-----AE--LFFSGRISYEEWARLDASLWKRRSGRLRREEV 72 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHHh---CchHHHHHH-----HH--HHHcCCCCHHHHHHHHHHHHhhcccCCCHHHH
Confidence 357899999999999988776654321 111000000 00 1111111211 111222233332 45555
Q ss_pred HHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEe-CCeeeeeEeCCCC
Q 043920 94 ESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATY-KGRATGLVRDPGV 168 (504)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~-~g~~tG~i~g~~~ 168 (504)
+++.++. .++|.+ +++++++|+.+ |||++++.+++++++. +|++.++++.+..+ +|..++..... +
T Consensus 73 ~~~~~~~-------~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~-~ 143 (201)
T TIGR01491 73 EEIFKEI-------SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVR-V 143 (201)
T ss_pred HHHHHhC-------CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeE-E
Confidence 5433322 255554 55888899776 6899999999999999 99999999988775 56666542110 0
Q ss_pred CCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 169 LVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 169 l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
....|.+.++++..+.+. .++||||.+|+++++.||.++++||++.++++|+
T Consensus 144 -~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 144 -TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred -ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 112455555544332222 5799999999999999999999999999999987
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=162.87 Aligned_cols=120 Identities=19% Similarity=0.162 Sum_probs=94.9
Q ss_pred hhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhC-----CCccEEEec----ccchhhhhccCceeE
Q 043920 277 FWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALG-----RPIPTVTYS----VSRLSEIISPIKAVR 347 (504)
Q Consensus 277 ~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~-----~~~~~v~k~----~~~~~~~~~~~g~i~ 347 (504)
-++.|++++|.| |+++ .++++|++|||+|++|.+++..+.. .++.+++|+ +|.+|+.+...|.|+
T Consensus 74 e~~~gvkv~v~G-e~l~-----~~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~ 147 (374)
T PLN02510 74 EKINKTKVVFSG-DKVP-----PEERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIP 147 (374)
T ss_pred HHhcCeEEEEEe-ecCC-----CCCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCee
Confidence 345899999999 6665 5789999999999999999876532 246788986 688999999999999
Q ss_pred eecCChh---hHHHHHHHhhcC----CEEEEcCceeeCCCccccccccccccCCeEEEEEEE
Q 043920 348 LSRDRAT---DASTIKKLLEEG----DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMV 402 (504)
Q Consensus 348 i~R~~~~---~~~~~~~~l~~G----~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~ 402 (504)
++|+.+. .++++.+.++++ .++|||||||+..+....++..+.+.|+||+.-++.
T Consensus 148 v~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 148 VERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred eeCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEc
Confidence 9998643 356666666653 589999999997776666776667888888877774
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-16 Score=145.61 Aligned_cols=120 Identities=24% Similarity=0.409 Sum_probs=86.6
Q ss_pred HHHHHH----HHhcCCCHHHHHHHHHHHcchh-hhcccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-
Q 043920 77 IQVLIF----ASFVGLRVTDIESVARAVLPKF-YASDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL- 146 (504)
Q Consensus 77 ~~~~~~----~~~~G~~~~~l~~~~~~~~~~~-~~~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~- 146 (504)
+.+.+. ..+.+++.++++.+.++ ..+. +.+.+.+ +.+++|+++|..+ |||||++.+++++++. +|++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~ 131 (192)
T PF12710_consen 54 YLELLKRYGGERLRGLSERYLEEIAKD-IEQYKLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDD 131 (192)
T ss_dssp HHHHHHHHCHHHHHTHHHHHHHHHHHH-HHHHHHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEG
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHh-hcccccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCce
Confidence 344455 56778888888877765 3321 0011113 3344678899776 5899999999999999 99987
Q ss_pred -EEeeeEEEe-C-CeeeeeEeCCCCCCchhHHHHHHHH---hC---CCCCeEEEeCCCCCHHHHh
Q 043920 147 -VLGTEIATY-K-GRATGLVRDPGVLVGNKKADALLKA---FG---ETQPEIGLGDRQTDIPFMA 202 (504)
Q Consensus 147 -vigt~l~~~-~-g~~tG~i~g~~~l~g~~Kv~~l~~~---~~---~~~~~~aygDS~~DlpmL~ 202 (504)
++||++ .+ + +..+|++.+.+ .| +|+++++++ .. .....++||||.+|+|||+
T Consensus 132 ~v~~~~~-~~~~~~~~~~~~~~~~--~~-~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 132 NVIGNEL-FDNGGGIFTGRITGSN--CG-GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp GEEEEEE-ECTTCCEEEEEEEEEE--ES-HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred EEEEEee-eecccceeeeeECCCC--CC-cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 999999 54 3 56788888764 35 899999998 21 2344679999999999986
|
|
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-16 Score=150.19 Aligned_cols=103 Identities=25% Similarity=0.245 Sum_probs=81.7
Q ss_pred hhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCC-----CccEEEec----ccchhhhhccCceeEe
Q 043920 278 WALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGR-----PIPTVTYS----VSRLSEIISPIKAVRL 348 (504)
Q Consensus 278 ~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~~~~~~~~g~i~i 348 (504)
+++|++++++|.++++ .++++|++|||+|++|.++++.++.+ .+.+++|+ .|.+++++...+.++|
T Consensus 6 ~~~g~~i~v~G~~~~~-----~~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v 80 (193)
T cd07990 6 WLSGVKVVVYGDEPKL-----PKERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFL 80 (193)
T ss_pred EecCeEEEEEecCccC-----CCccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEE
Confidence 3579999999999985 46899999999999999999888753 46788886 5778888888999999
Q ss_pred ecCChhh---HHHHHHHhhc---C-CEEEEcCceeeCCCccccc
Q 043920 349 SRDRATD---ASTIKKLLEE---G-DLAMCPEGTTCREPFLLRF 385 (504)
Q Consensus 349 ~R~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l~~F 385 (504)
+|+...+ ++...+.+++ | +++|||||||+..+.+.++
T Consensus 81 ~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~ 124 (193)
T cd07990 81 KRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERS 124 (193)
T ss_pred ECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHH
Confidence 9986544 3344444444 6 8999999999987765544
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.6e-16 Score=172.12 Aligned_cols=146 Identities=13% Similarity=0.095 Sum_probs=103.9
Q ss_pred CCcEEEEecCCCCChHHHHHHhhC----CCccEEEec----ccchhhhhccCceeEeecCChhh--H----HH-HHHHhh
Q 043920 300 QTGVLFVCSHRTLLDPIFLSVALG----RPIPTVTYS----VSRLSEIISPIKAVRLSRDRATD--A----ST-IKKLLE 364 (504)
Q Consensus 300 ~~~~viVaNH~S~lD~~~l~~~~~----~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~--~----~~-~~~~l~ 364 (504)
+.++|+++||.|++|++++..++. .+..++++. +|.++++++..|++||+|+...+ . +. +.+.++
T Consensus 628 ~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk 707 (1108)
T PTZ00374 628 RVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDDFLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVL 707 (1108)
T ss_pred CCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchhhhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 469999999999999999977764 233566664 68899999999999999986542 2 22 355688
Q ss_pred cC-CEEEEcCceeeCCCccccccccc----cc---------cCCeEEEEEEEccccCccc----cccCCCCCCcccc---
Q 043920 365 EG-DLAMCPEGTTCREPFLLRFSALF----AE---------LTDELVPVAMVNRMSMFHG----TTARGWKGMDPFY--- 423 (504)
Q Consensus 365 ~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~---------~~~pIvPV~i~~~~~~~~~----~~~~~~~~~~~~~--- 423 (504)
+| ++.+|||||||+++.++++|.|. .+ .+++||||+|.|...+-.. ...+..+..+.+.
T Consensus 708 ~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl~~ll 787 (1108)
T PTZ00374 708 RRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQQELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENPGNLL 787 (1108)
T ss_pred CCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcccCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCHHHHH
Confidence 89 99999999999999999999993 22 2789999999996432110 0001111112111
Q ss_pred ----ccccCCCeEEEEEecCcCCccc
Q 043920 424 ----FFMNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 424 ----~~~~p~~~v~V~~l~pi~~~~~ 445 (504)
.+.+....++|+|++||+.+++
T Consensus 788 k~ir~L~~~~GrV~V~FGEPISLrey 813 (1108)
T PTZ00374 788 RARSLLKRRHGKIHVHIGEPVSLRSF 813 (1108)
T ss_pred HHHHHHhccCceEEEECCCCccHHHH
Confidence 1223334499999999987765
|
|
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-15 Score=155.34 Aligned_cols=104 Identities=22% Similarity=0.182 Sum_probs=79.9
Q ss_pred hhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCC-----CccEEEec----ccchhhhhccCceeE
Q 043920 277 FWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGR-----PIPTVTYS----VSRLSEIISPIKAVR 347 (504)
Q Consensus 277 ~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~-----~~~~v~k~----~~~~~~~~~~~g~i~ 347 (504)
-+.+|++++|+|.++.... ..++++|++|||||++|.+++.....+ +..+++|+ +|.+|+.+...|.|+
T Consensus 62 ~~~~Gvkv~V~gd~~~~~~--~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~If 139 (376)
T PLN02380 62 DWWAGVKVQLYADEETFEL--MGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVF 139 (376)
T ss_pred HHcCCeEEEEEecchhhcc--CCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEE
Confidence 3678999999997653200 024579999999999999998877543 25678886 789999999999999
Q ss_pred eecCChhh---HHHHHHHhhc---C-CEEEEcCceeeCCCcc
Q 043920 348 LSRDRATD---ASTIKKLLEE---G-DLAMCPEGTTCREPFL 382 (504)
Q Consensus 348 i~R~~~~~---~~~~~~~l~~---G-~l~IFPEGTrs~~~~l 382 (504)
+||+...+ ++...+.+++ | .++|||||||...+.+
T Consensus 140 IdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~ 181 (376)
T PLN02380 140 LERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKL 181 (376)
T ss_pred ecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchhh
Confidence 99987655 4445566665 5 7999999999976654
|
|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-15 Score=130.57 Aligned_cols=101 Identities=32% Similarity=0.432 Sum_probs=84.4
Q ss_pred EEEEecCCCCChHHHHHHhhCC---CccEEEec----ccchhhhhccCceeEeecCCh-hh---HHHHHHHhhcC-CEEE
Q 043920 303 VLFVCSHRTLLDPIFLSVALGR---PIPTVTYS----VSRLSEIISPIKAVRLSRDRA-TD---ASTIKKLLEEG-DLAM 370 (504)
Q Consensus 303 ~viVaNH~S~lD~~~l~~~~~~---~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~-~~---~~~~~~~l~~G-~l~I 370 (504)
+|+++||.|++|.++++..+.+ +..++++. .|.++.++...|.++++|... .. ++++.+.+++| +++|
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4899999999999999998864 46777765 567888888999999999775 22 45555677778 8999
Q ss_pred EcCceeeCCCccccccccc----cccCCeEEEEEEEc
Q 043920 371 CPEGTTCREPFLLRFSALF----AELTDELVPVAMVN 403 (504)
Q Consensus 371 FPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~ 403 (504)
||||+++++..+.+|++|+ .+.+.||+||++.|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 9999999888899999994 45689999999987
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=139.60 Aligned_cols=185 Identities=16% Similarity=0.090 Sum_probs=117.7
Q ss_pred EEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHHHHHHHHcc
Q 043920 23 VVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARAVLP 102 (504)
Q Consensus 23 a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~~~~~~ 102 (504)
++|||||||++.||...++..+..+ .+... . ..+ ..++...++.+...+.++...+.++ ..+++.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~---~~~~~-----~-~~~-----~~g~~~~~e~~~~~~~~~~~~~~~~-~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPP---EWEAL-----K-DGV-----LSKTLSIQEGVGRMFGLLPSSLKEE-ITSFVL 66 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcH---HHHHH-----H-HHH-----HcCCccHHHHHHHHHhhCCCchHHH-HHHHHH
Confidence 6899999999999977666533211 11111 0 111 1122112333334444443333222 222222
Q ss_pred hhhhcccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcC-CcEEEeeeEEEeCCeeeeeEeC-------CCCCC
Q 043920 103 KFYASDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLA-ADLVLGTEIATYKGRATGLVRD-------PGVLV 170 (504)
Q Consensus 103 ~~~~~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg-~d~vigt~l~~~~g~~tG~i~g-------~~~l~ 170 (504)
+. -.++| +.+++++++|..+ |||++++.+++++++. ++ .+.++|+++.+.++.+++.... .+|
T Consensus 67 ~~--~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~c-- 141 (214)
T TIGR03333 67 ET--AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQC-- 141 (214)
T ss_pred hc--CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCC--
Confidence 21 13566 4455888899776 6899999999999998 64 5788999998887777765442 234
Q ss_pred chhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-ee
Q 043920 171 GNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FH 231 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~ 231 (504)
|..|..+++++....+..+++|||.+|+++++.|+..++-+ .|....+ +++-+.+ |+
T Consensus 142 g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~---~l~~~~~-~~~~~~~~~~ 199 (214)
T TIGR03333 142 GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD---YLLNECE-ELGLNHAPFQ 199 (214)
T ss_pred CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH---HHHHHHH-HcCCCccCcC
Confidence 66799999987655455679999999999999999966544 3444555 6666665 65
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-15 Score=160.50 Aligned_cols=185 Identities=16% Similarity=0.082 Sum_probs=124.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCC----CccEEEe---cccchhhhhccCceeEeecCCh
Q 043920 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGR----PIPTVTY---SVSRLSEIISPIKAVRLSRDRA 353 (504)
Q Consensus 281 Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~----~~~~v~k---~~~~~~~~~~~~g~i~i~R~~~ 353 (504)
.++|...+.+.+.. ...+.|.|+++||+|++|.+++..++.. +..+++- ..|.++.+++..|++|+-|...
T Consensus 97 ~v~v~~~~~~~lr~--~~~~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRsf~ 174 (621)
T PRK11915 97 DVLVDEDQITQLRK--LDRKATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQTK 174 (621)
T ss_pred eEEeCHHHHHHHHH--hccCCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccCCC
Confidence 45566666554321 1157899999999999999999876532 2223332 2788899999999999998765
Q ss_pred hh------H-HHHHHHhhcC-CEEEEcCceeeCCCccccccccc-c----------ccCCeEEEEEEEccccCcccc---
Q 043920 354 TD------A-STIKKLLEEG-DLAMCPEGTTCREPFLLRFSALF-A----------ELTDELVPVAMVNRMSMFHGT--- 411 (504)
Q Consensus 354 ~~------~-~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~-~----------~~~~pIvPV~i~~~~~~~~~~--- 411 (504)
.. + +-+...+++| ++.+|||||||++|.+++-|-|. . ..+++||||+|.|.+.+-...
T Consensus 175 ~~~LY~~vl~eYi~~ll~~G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y~~ 254 (621)
T PRK11915 175 DIPVYRFVLRAYAAQLVQNHVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAMTT 254 (621)
T ss_pred CchHHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHHHH
Confidence 43 3 5566788899 99999999999999999988883 1 357899999999965431110
Q ss_pred -ccCCCCCCcccc-------ccccCCCeEEEEEecCcCCccccC--------CCCCHHHHHHHHHHHHHHHc
Q 043920 412 -TARGWKGMDPFY-------FFMNPCPAYEVTFLNKLPMELTCG--------SGKSSHEVANYIQRVIAATL 467 (504)
Q Consensus 412 -~~~~~~~~~~~~-------~~~~p~~~v~V~~l~pi~~~~~~~--------~~~~~~~la~~v~~~i~~~l 467 (504)
-.++.+-.+.++ .+.++...+.|+|++|++..++.+ .+...+.++.+|...|.+..
T Consensus 255 El~G~~K~~Esl~~l~~~~~~l~~~~G~i~V~FgePisL~~~l~~~~~~~~~~~~~v~~La~~V~~~In~~~ 326 (621)
T PRK11915 255 EAYGAVKRPEDLRFLVRLARQQGERLGRAYLDFGEPLPLRKRLQELRADKSGTGSEIERIALDVEHRINRAT 326 (621)
T ss_pred HhcCCCCCccHHHHHHHHHHHHhhcCceEEEECCCCccHHHHHhhhccCcccchhHHHHHHHHHHHHHhhcc
Confidence 011111122221 222333349999999999876521 12345677777777776653
|
|
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-14 Score=133.83 Aligned_cols=157 Identities=18% Similarity=0.208 Sum_probs=118.8
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh-CCCccEEEec--ccchhhhhc----cCceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYS--VSRLSEIIS----PIKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~~~~~~----~~g~i~i~R~~~~~ 355 (504)
+++++|.|+++.. ...++|+|+++||+|++|.+..+... +.++.++.++ .+.+..++. ..|..+|+|+ ..
T Consensus 3 ~~~i~~~e~l~~~-~~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~g~~~i~~~--~~ 79 (192)
T cd07984 3 RVEREGLEHLEAA-LAKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPLKNPLLDRLITRGRERFGARLIPRG--GG 79 (192)
T ss_pred eeEecCHHHHHHH-HHcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECCCCHHHHHHHHHHHHhcCCeeEcCC--ch
Confidence 5778888876410 00257999999999999998876665 6677777776 455666664 3578888876 46
Q ss_pred HHHHHHHhhcC-CEEEEcCceeeCCC-cccc-------ccccc----cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTCREP-FLLR-------FSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs~~~-~l~~-------Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
++.+.+.+++| .++|||||+++..+ ...+ |+.|+ .++++||+|+.+.+..
T Consensus 80 ~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------------- 142 (192)
T cd07984 80 LRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------------- 142 (192)
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------------
Confidence 78888899999 99999999999664 4444 58883 4679999999997631
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCC
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSY 469 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~ 469 (504)
++. ++|+|++|+++. ..++.+++++++.+.+.+.+..
T Consensus 143 -----~~~-~~i~~~~~i~~~----~~~~~~~~~~~~~~~lE~~i~~ 179 (192)
T cd07984 143 -----GGG-YRIEFEPPLENP----PSEDVEEDTQRLNDALEAAIRE 179 (192)
T ss_pred -----CCC-EEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHh
Confidence 133 899999999876 3678889999998888887553
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.1e-13 Score=129.05 Aligned_cols=189 Identities=13% Similarity=0.058 Sum_probs=116.0
Q ss_pred ceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043920 20 KHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESVARA 99 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~~~ 99 (504)
+.+++|||||||++.++....+..+ + ...+.. .. ..+....+.-++. + +..+..+.+...+++.+...+
T Consensus 3 ~~~vifDfDgTi~~~d~~~~~~~~~----~-~~~~~~---i~-~~~~~g~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~ 71 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNIIAIMKKF----A-PPEWEE---LK-DDILSQELSIQEG-V-GQMFQLLPSNLKEEIIQFLLE 71 (219)
T ss_pred CcEEEEcCCCCCCcchhhHHHHHHh----C-HHHHHH---HH-HHHHhCCcCHHHH-H-HHHHHhCCCCchHHHHHHHHh
Confidence 4589999999999999865312111 1 111100 00 0010010111111 2 233334555444555433321
Q ss_pred HcchhhhcccCHH---HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCC----
Q 043920 100 VLPKFYASDLHPE---SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVL---- 169 (504)
Q Consensus 100 ~~~~~~~~~~~~~---~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l---- 169 (504)
-. .++|. .+++++++|..+ |||++++.+++++.+. + + +.++|++..+.++..+..-..+ |.
T Consensus 72 ~~------~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p-~~~~~~ 142 (219)
T PRK09552 72 TA------EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHP-CDEHCQ 142 (219)
T ss_pred CC------CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCC-cccccc
Confidence 11 25564 456888999776 6899999999999998 6 5 5688988877655555433222 20
Q ss_pred --CchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-eeC
Q 043920 170 --VGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FHD 232 (504)
Q Consensus 170 --~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~ 232 (504)
.|..|.+.++++-...+-.+++|||.+|+++.+.|+.+++. ..|...++ +++|+.+ |++
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~---~~l~~~~~-~~~~~~~~~~~ 204 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR---DFLITKCE-ELGIPYTPFET 204 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH---HHHHHHHH-HcCCCccccCC
Confidence 14569999888754444467999999999999999997762 25666777 8999987 763
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-12 Score=123.92 Aligned_cols=173 Identities=14% Similarity=0.117 Sum_probs=107.5
Q ss_pred CcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH--HHHHHHHHHhcCCCHHHHHH
Q 043920 18 REKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA--GIQVLIFASFVGLRVTDIES 95 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~l~~ 95 (504)
+.+++++|||||||++.++....+..+ +....... ....+..+..+. .++..+ ..+. .+.+++++
T Consensus 10 ~~~k~viFDfDGTL~~~~~~~~~~~~~----g~~~~~~~-------~~~~~~~g~~~~~~~~~~~~-~~~~-~~~~~~~~ 76 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGIDELAEFC----GAGEAVAE-------WTAKAMGGSVPFEEALAARL-SLFK-PSLSQVEE 76 (224)
T ss_pred ccCCEEEEeCCCcccchHHHHHHHHHc----CChHHHHH-------HHHHHHCCCCCHHHHHHHHH-HHcC-CCHHHHHH
Confidence 457999999999999987753322211 11111110 000111111221 122222 2222 24555544
Q ss_pred HHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc--EEEeeeEEEe-CCeeeeeEeCC-C
Q 043920 96 VARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD--LVLGTEIATY-KGRATGLVRDP-G 167 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d--~vigt~l~~~-~g~~tG~i~g~-~ 167 (504)
+.++. ...++|++ +++++++|..+ |+|++++.+++++++. +|++ +++++++.+. +|.++|..... .
T Consensus 77 ~~~~~-----~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~ 150 (224)
T PLN02954 77 FLEKR-----PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPT 150 (224)
T ss_pred HHHHc-----cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcc
Confidence 43331 22356655 45788899776 6999999999999999 9996 6899988885 78888865432 2
Q ss_pred CCCchhHHHHHHHHhCCCC--CeEEEeCCCCCHHHHhhcccCeee
Q 043920 168 VLVGNKKADALLKAFGETQ--PEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 168 ~l~g~~Kv~~l~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
| .+..|.+.++.+....+ -.+++|||.+|+.+.+.++..+.+
T Consensus 151 ~-~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~ 194 (224)
T PLN02954 151 S-RSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFI 194 (224)
T ss_pred c-CCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEE
Confidence 3 56679888887654432 357899999999997776666555
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3e-11 Score=109.45 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=108.8
Q ss_pred CCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH--HHHHHHHHHhcCCCHHHHH
Q 043920 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA--GIQVLIFASFVGLRVTDIE 94 (504)
Q Consensus 17 ~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~l~ 94 (504)
-++..+++||+|-|++..+-.-++-.+...+ ... .... .. .+-+..++ .+++. ...+.+..++ ++
T Consensus 13 ~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~-----~~V--a~~T--~r--AMng~~~F~eaL~~R-l~llqp~~~q-v~ 79 (227)
T KOG1615|consen 13 WRSADAVCFDVDSTVIQEEGIDELAAYCGVG-----EAV--AEVT--RR--AMNGEADFQEALAAR-LSLLQPLQVQ-VE 79 (227)
T ss_pred HHhcCeEEEecCcchhHHhhHHHHHHHhCch-----HHH--HHHH--HH--HhCCCCcHHHHHHHH-HHHhcccHHH-HH
Confidence 3578899999999999977654443332111 111 0000 00 01112222 13333 2356775443 33
Q ss_pred HHHHHHcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE--EEeeeEEEe-CCeeee-eEeCC
Q 043920 95 SVARAVLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADL--VLGTEIATY-KGRATG-LVRDP 166 (504)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~--vigt~l~~~-~g~~tG-~i~g~ 166 (504)
+.... -.+.+.|.+.| .|+++|..+ ++||+++.+++|++.+ ||++. ++|++++++ +|+|+| ...++
T Consensus 80 ~~v~~-----~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~p 153 (227)
T KOG1615|consen 80 QFVIK-----QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEP 153 (227)
T ss_pred HHHhc-----CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCc
Confidence 22221 12345655544 788999665 6999999999999999 99986 999999996 899988 67776
Q ss_pred CCCCchhHHHHHHHHhCCCCC--eEEEeCCCCCHHHHhh
Q 043920 167 GVLVGNKKADALLKAFGETQP--EIGLGDRQTDIPFMAL 203 (504)
Q Consensus 167 ~~l~g~~Kv~~l~~~~~~~~~--~~aygDS~~DlpmL~~ 203 (504)
...+.+|.+.|+.......+ ...+||+.+|+++..-
T Consensus 154 -tsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 154 -TSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred -cccCCccHHHHHHHHhCCChheeEEecCCccccccCCc
Confidence 44888999999887653222 3489999999998876
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=109.94 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=87.4
Q ss_pred cCCCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEe-CCeee
Q 043920 86 VGLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATY-KGRAT 160 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~-~g~~t 160 (504)
.|++.++++.+.+.. + .+|++ ++.++++ ..+ |+|++++.+++++.++ +|++.++++.+... ++.++
T Consensus 53 ~~~~~~~i~~~~~~~-~------~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~ 123 (205)
T PRK13582 53 HGLGLADIQEVIATL-D------PLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMIT 123 (205)
T ss_pred cCCCHHHHHHHHHhC-C------CCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEE
Confidence 467888886655542 1 34444 5567767 555 6899999999999999 99998888888775 66677
Q ss_pred eeEeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchh
Q 043920 161 GLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVK 217 (504)
Q Consensus 161 G~i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~ 217 (504)
|.-. + .++.|...++++-....-.+++|||.+|+++.+.++.++.++++....
T Consensus 124 ~~~~---~-~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~ 176 (205)
T PRK13582 124 GYDL---R-QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVI 176 (205)
T ss_pred Cccc---c-ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHH
Confidence 6542 1 345687777765433334679999999999999999999998866543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-10 Score=107.33 Aligned_cols=116 Identities=17% Similarity=0.187 Sum_probs=84.7
Q ss_pred cCCCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEe-C
Q 043920 86 VGLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATY-K 156 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~-~ 156 (504)
.+.+.+++.++.++. .+++++ ++.++++|..+ |+|++....++++.+. +|+ +.+++++..++ +
T Consensus 57 ~~~~~~~~~~~~~~~-------~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~ 128 (188)
T TIGR01489 57 SGLKEDEILEVLKSA-------PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDND 128 (188)
T ss_pred cCCCHHHHHHHHHhC-------CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCC
Confidence 466777776655431 144444 55777889665 6899999999999998 886 46899888886 6
Q ss_pred CeeeeeEeC----CCCCCchhHHHHHHHHhCC-CCCeEEEeCCCCCHHHHhhcccCee
Q 043920 157 GRATGLVRD----PGVLVGNKKADALLKAFGE-TQPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 157 g~~tG~i~g----~~~l~g~~Kv~~l~~~~~~-~~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
|.+++...+ ..+..|..|.+.++++... ..-.+++|||.+|+++.+.|+..++
T Consensus 129 g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 129 GRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CcEEEecCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 888876554 1122566798888887654 4446799999999999999877665
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.5e-12 Score=122.38 Aligned_cols=183 Identities=10% Similarity=-0.090 Sum_probs=127.5
Q ss_pred EEEec-CCCCChHHHHHHhhCCC--ccEEEecccchhhhhccCceeEeecCChhhHHH----HH-HHhhcC---CEEEEc
Q 043920 304 LFVCS-HRTLLDPIFLSVALGRP--IPTVTYSVSRLSEIISPIKAVRLSRDRATDAST----IK-KLLEEG---DLAMCP 372 (504)
Q Consensus 304 viVaN-H~S~lD~~~l~~~~~~~--~~~v~k~~~~~~~~~~~~g~i~i~R~~~~~~~~----~~-~~l~~G---~l~IFP 372 (504)
+.+|| |.|..|-+++-+..... +.-..++++.++.......++++.|.....++. +. ..++.| +|++||
T Consensus 9 ~~~s~p~ss~~d~~~~~s~s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~~ 88 (412)
T KOG4666|consen 9 NSNSNPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLY 88 (412)
T ss_pred cccCCCCccccccchhhhcccHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeeee
Confidence 55565 88888877654432100 111223477788777777888888877655332 22 234456 799999
Q ss_pred CceeeCCCccccccccccccCCeEEEEEEEccccCccccccCCCCCCcccccccc-CCCeEEEEEecCcCCccccCCCCC
Q 043920 373 EGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMN-PCPAYEVTFLNKLPMELTCGSGKS 451 (504)
Q Consensus 373 EGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~v~V~~l~pi~~~~~~~~~~~ 451 (504)
|||++ .+.-||+|++-.+.|+||+.++|.+..-+..-|.+.-+....|++++ -...+.+.|.+.-.+++ +++.+
T Consensus 89 ~~~C~---~~~~Fk~~~~~P~~~~q~~~l~y~n~~~~~t~Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~--ee~~d 163 (412)
T KOG4666|consen 89 YLICR---VFTLFSAPYRGPEEEEDEGGVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDR--DSDMD 163 (412)
T ss_pred ccceE---EEEEecCCccCCCCCcCcceEeccccccceeccccchHHHHHHHHHHHHHhheeEEEEeccCCCh--hhhcC
Confidence 99999 88999999988999999999999654322211111123334444432 23458899998776653 24677
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHhcCCCcccc
Q 043920 452 SHEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVV 491 (504)
Q Consensus 452 ~~~la~~v~~~i~~~l~~~~t~~t~~dk~~~~~~~~~~~~ 491 (504)
+.-++..++..|+++|+.+.|++|.+|+.++++-++-.++
T Consensus 164 ~~~~at~v~~~maealg~~vtd~t~edc~l~vs~gql~lp 203 (412)
T KOG4666|consen 164 SNPKTTSTEINMAEALGTEVTDRTGEDCSLHVSYGQLLLP 203 (412)
T ss_pred CcccchhHHHHHHHhhCCCCCCCchHHHHHHHhhccEecc
Confidence 8889999999999999999999999999998886665555
|
|
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.9e-11 Score=111.23 Aligned_cols=147 Identities=15% Similarity=0.129 Sum_probs=103.1
Q ss_pred EEEEcCCC-------CCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec-------------ccchhhhhcc
Q 043920 283 RVIVKGTP-------PPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS-------------VSRLSEIISP 342 (504)
Q Consensus 283 ~v~v~G~~-------~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~-------------~~~~~~~~~~ 342 (504)
+..|+|+| +.| .+.|.|-||||+|.+|=+.++++++.+..+-.+. .++...|++.
T Consensus 49 k~~v~n~e~l~~l~~~Rp-----~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~fFsl 123 (286)
T KOG2847|consen 49 KLLVHNRETLTALLESRP-----PNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNFFSL 123 (286)
T ss_pred ccccccHHHHHHHHHcCC-----CCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHHHhc
Confidence 55666665 334 5789999999999998888887775432221111 3455666667
Q ss_pred CceeEeecCCh---hhHHHHHHHhhcC-CEEEEcCceee-CCCccccccccc--cccCCe----EEEEEEEccccCcccc
Q 043920 343 IKAVRLSRDRA---TDASTIKKLLEEG-DLAMCPEGTTC-REPFLLRFSALF--AELTDE----LVPVAMVNRMSMFHGT 411 (504)
Q Consensus 343 ~g~i~i~R~~~---~~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~G~--~~~~~p----IvPV~i~~~~~~~~~~ 411 (504)
-.++++.|+.. ..++.+.+.|.+| -+.|||||..+ .+..+++||-|. .-+..| |+|+.-.+-+.++...
T Consensus 124 GkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~ 203 (286)
T KOG2847|consen 124 GKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEA 203 (286)
T ss_pred CceEeeeccCccccccHHHHHHhcCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHhCccC
Confidence 78999999775 3378888899999 89999999999 667899999994 222333 3455555533333222
Q ss_pred ccCCCCCCccccccccCCCeEEEEEecCcCCcc
Q 043920 412 TARGWKGMDPFYFFMNPCPAYEVTFLNKLPMEL 444 (504)
Q Consensus 412 ~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~ 444 (504)
. -+..+++..|+|++|+||..++
T Consensus 204 ~----------p~vp~~Gk~vtV~IG~P~~~~d 226 (286)
T KOG2847|consen 204 P----------PYVPRFGKTVTVTIGDPINFDD 226 (286)
T ss_pred C----------CccCCCCCEEEEEeCCCcchhH
Confidence 0 1456778889999999998764
|
|
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=100.94 Aligned_cols=78 Identities=22% Similarity=0.264 Sum_probs=60.4
Q ss_pred CCCcEEEEecCCCCChHHHHHHhhCCC-----ccEEEec----ccchhhhhccCceeEeecCChhh---HHHHHHHhhcC
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVALGRP-----IPTVTYS----VSRLSEIISPIKAVRLSRDRATD---ASTIKKLLEEG 366 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~~~~-----~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~---~~~~~~~l~~G 366 (504)
.+.++|+++||+|..|-+.++....++ ..++.|+ +|.+|+.+...|-||++|+-+.+ +.+..+.+++-
T Consensus 69 ~~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~~~l~~~~k~l~~~ 148 (346)
T KOG1505|consen 69 GKERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDEKTLISLLKHLKDS 148 (346)
T ss_pred CCCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhHHHHHHHHHHhccC
Confidence 467899999999999999999765432 2344554 78899999999999999987655 45555566543
Q ss_pred ----CEEEEcCcee
Q 043920 367 ----DLAMCPEGTT 376 (504)
Q Consensus 367 ----~l~IFPEGTr 376 (504)
.+++||||||
T Consensus 149 ~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 149 PDPYWLLLFPEGTR 162 (346)
T ss_pred CCceEEEEecCCCc
Confidence 6999999994
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.9e-08 Score=86.33 Aligned_cols=191 Identities=13% Similarity=0.097 Sum_probs=111.8
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHh--cCCCHHHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASF--VGLRVTDIESV 96 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~l~~~ 96 (504)
.+.+.+.|||||++-.|+---...-+.. +.+- .+ . .-+ + +.....+.-+..+| -+.+.+|+-+.
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf~~--~e~k-~l-----~-~~v-l----s~tiS~rd~~g~mf~~i~~s~~Eile~ 67 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTFGP--GEWK-AL-----K-DGV-L----SKTISFRDGFGRMFGSIHSSLEEILEF 67 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhccCc--hHHH-HH-----H-HHH-h----hCceeHHHHHHHHHHhcCCCHHHHHHH
Confidence 3557899999999999884322221111 1111 11 0 111 1 11111233333332 35566665433
Q ss_pred HHHHcchhhhcccCHHHHHHHhhCCCE-EEEecCcHHHHHHHHHhhcCCcEEEeeeEEEe------CCeeeeeEeCCCCC
Q 043920 97 ARAVLPKFYASDLHPESWRVFSSCGKR-CVLTANPRIMVEAFLKDFLAADLVLGTEIATY------KGRATGLVRDPGVL 169 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~G~~-vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~------~g~~tG~i~g~~~l 169 (504)
...=.. +. --..+..+|.++++.. +||||+.++++.|+.+.++|-+.+.+.++-.+ ||...=.-...+.
T Consensus 68 llk~i~--Id-p~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~- 143 (220)
T COG4359 68 LLKDIK--ID-PGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQ- 143 (220)
T ss_pred HHhhcc--cC-ccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccc-
Confidence 322111 11 1224567799988855 56999999999999999666666666555432 3322211111223
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-ee
Q 043920 170 VGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FH 231 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~ 231 (504)
+|-.|-..++++....+..+..|||.+|+.--+.+++-+|-. .|-...+ +++-+-+ |.
T Consensus 144 fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~---~L~nyc~-eqn~~f~~fe 202 (220)
T COG4359 144 FGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKD---DLLNYCR-EQNLNFLEFE 202 (220)
T ss_pred cCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhHH---HHHHHHH-HcCCCCcccc
Confidence 788899999998765554557899999999888888876654 6777777 7777765 54
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.5e-07 Score=88.96 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=63.1
Q ss_pred ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 108 DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 108 ~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
.++|++.+ .++++|+.+ |+|++....++++.++ +|++..+...+.. .-.+ .+..+.+.++.++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~-------~~~~----~~Kp~~~~~~~~~~ 159 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASA-------EKLP----YSKPHPEVYLNCAA 159 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEc-------ccCC----CCCCCHHHHHHHHH
Confidence 35566644 778899776 6899999999999999 8986554332211 1000 12223345555554
Q ss_pred CCCC----eEEEeCCCCCHHHHhhcccCeeeCCCc
Q 043920 184 ETQP----EIGLGDRQTDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 184 ~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~ 214 (504)
..++ .+.+|||.+|++..+.+|-+.+.-+++
T Consensus 160 ~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 160 KLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred HcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence 4333 568999999999999999776665544
|
|
| >KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.1e-08 Score=100.71 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=123.4
Q ss_pred HHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchh----hhhccCceeE
Q 043920 274 YYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLS----EIISPIKAVR 347 (504)
Q Consensus 274 ~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~----~~~~~~g~i~ 347 (504)
+.+.+++--++...+.++.+ ..+.+-|+||.|.+|.+++... +...+... -+.++ .+..+...+.
T Consensus 116 ~llsra~~~~i~~~~~~~~~------~~g~i~v~nh~Sp~d~~vls~~---~~~~~v~q~~~~~v~viq~~~~~~s~~~~ 186 (354)
T KOG2898|consen 116 RLLSRAKSLRISFHDELLLF------PEGGICVANHFSPWDVLVLSVD---NCYALVGQVHGGLVGVIQLALSRASLHFW 186 (354)
T ss_pred hHHHHHhhhhhcccChhhcC------CCCCCceecccCceeEEEeccc---cchheeeecccceEEEeeehhhhhchhhh
Confidence 55555666677777777664 2336899999999999987764 22333332 12221 1222234455
Q ss_pred eecCChhh----HHHHHHHhhcC---CEEEEcCceeeCCCcccccc-ccccccCCeEEEEEEEccccC----ccccccCC
Q 043920 348 LSRDRATD----ASTIKKLLEEG---DLAMCPEGTTCREPFLLRFS-ALFAELTDELVPVAMVNRMSM----FHGTTARG 415 (504)
Q Consensus 348 i~R~~~~~----~~~~~~~l~~G---~l~IFPEGTrs~~~~l~~Fk-~G~~~~~~pIvPV~i~~~~~~----~~~~~~~~ 415 (504)
-.|....+ .+..++...++ ++++|||||+.++..+..|| +|-++.+..|.|++|.|.... |... .
T Consensus 187 f~~~e~~d~~~~~~~~~e~~~~~~~~~ii~fpegtCinn~~~~~fk~k~~~e~~~~i~pvaik~~~~~~~~f~~s~---~ 263 (354)
T KOG2898|consen 187 FERLEFTDRQVVAKRLAEHVWNERKEPILLFPEGTCINNTKVMQFKLKGSFEEGVKIYPVAIKYDPRFGDAFWNSP---E 263 (354)
T ss_pred hhcchhhhhHhhhhhhhHHHhcCCCCcEEEeecceeeCCceeEEEecCCChhhcceeeeeeeecCccccccccCCc---c
Confidence 55544333 23444444443 79999999999999999999 887889999999999995432 2211 1
Q ss_pred CCCCccccccccCC-CeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 416 WKGMDPFYFFMNPC-PAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 416 ~~~~~~~~~~~~p~-~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
..+.-.++.++... ....+-+++|+... +++|.-++++++.+.++...+......+..-|
T Consensus 264 ~s~~~~l~~~~ts~~~v~~i~~l~~~~r~----~~et~t~~a~~v~~~ig~~~gl~~~~~dg~lk 324 (354)
T KOG2898|consen 264 LSFTRYLLELMTSWAIVCDIWYLPPMRRD----NDETATQFANRVKSLIGKSAGLKDLEWDGLLK 324 (354)
T ss_pred ccHHHHHHHHHhhhheeeeeeecccEEee----cccchhHHHHHHHHHHHHhhCCcccCcCCcee
Confidence 11111122223222 23678899999887 58999999999999999998877666544433
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.9e-07 Score=88.64 Aligned_cols=161 Identities=17% Similarity=0.173 Sum_probs=93.7
Q ss_pred EEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHh--cCCCHHHHHHHHHH
Q 043920 22 TVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASF--VGLRVTDIESVARA 99 (504)
Q Consensus 22 ~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~l~~~~~~ 99 (504)
+++||||+||++.||-...+..+.. ..+...+ ...+.- .....+...++..+ .|.+.+++.+..+.
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~--~~~~~~l---------~~~~~~-~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ 69 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPP--EELPEEL---------RESYPK-GGWTEYMDRVLQLLHEQGVTPEDIRDALRS 69 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCC--cccHHHH---------HHhccc-cchHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 7899999999999995433322211 1111111 111110 01111222233333 48999999876664
Q ss_pred HcchhhhcccCHHHHH---HH--hhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEe-CCeee-eeEeCCC
Q 043920 100 VLPKFYASDLHPESWR---VF--SSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATY-KGRAT-GLVRDPG 167 (504)
Q Consensus 100 ~~~~~~~~~~~~~~~~---~~--~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~-~g~~t-G~i~g~~ 167 (504)
. + +.|.+.+ .+ .+.|..+ |+|-|.+++++.+.+. .|+ +.|+++...++ +|++. .......
T Consensus 70 i-p------~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~ 141 (234)
T PF06888_consen 70 I-P------IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHG 141 (234)
T ss_pred C-C------CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCC
Confidence 3 3 4555544 44 2457555 6899999999999999 786 46788888876 67654 2222222
Q ss_pred CCCc---hhHHHHHHHHhCC---CC----CeEEEeCCCCCHHHHh
Q 043920 168 VLVG---NKKADALLKAFGE---TQ----PEIGLGDRQTDIPFMA 202 (504)
Q Consensus 168 ~l~g---~~Kv~~l~~~~~~---~~----~~~aygDS~~DlpmL~ 202 (504)
|-.. -=|-..|+++..+ .+ -.+++||+.||.--..
T Consensus 142 C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 142 CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 3211 1377777776543 22 1458999999985443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.5e-07 Score=92.52 Aligned_cols=144 Identities=15% Similarity=0.131 Sum_probs=98.4
Q ss_pred HHhcCC--CHHHHHHHHHHHcchhhhcccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeE
Q 043920 83 ASFVGL--RVTDIESVARAVLPKFYASDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEI 152 (504)
Q Consensus 83 ~~~~G~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l 152 (504)
..+.|. +.++++++.++.--+ ++| +.+++++++|..+ |+|||+...++++++. +|++ .++|+++
T Consensus 99 ~l~~~~~~~~e~i~~~v~~~~l~-----l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L 172 (277)
T TIGR01544 99 GLLVQQAFPKAKIKEIVAESDVM-----LKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFM 172 (277)
T ss_pred HHHhcCCCCHHHHHHHHhhcCCc-----cCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeE
Confidence 456665 999998877632111 344 4556888899665 6899999999999999 8884 8999999
Q ss_pred EEe-CCeeeeeEeCCCCCCchhHHHHHHH----HhCC-C--CCeEEEeCCCCCHHHHhhcc---cCeee---CCCcchhc
Q 043920 153 ATY-KGRATGLVRDPGVLVGNKKADALLK----AFGE-T--QPEIGLGDRQTDIPFMALCK---EGYLV---PSKPEVKA 218 (504)
Q Consensus 153 ~~~-~g~~tG~i~g~~~l~g~~Kv~~l~~----~~~~-~--~~~~aygDS~~DlpmL~~a~---~~~~V---np~~~l~~ 218 (504)
.++ ||.+|| ..++- +...+|.+.+.+ .+++ . .-.++.|||.+|++|..-+. +.+-| |.+.+ +.
T Consensus 173 ~f~~dGvltG-~~~P~-i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e-~~ 249 (277)
T TIGR01544 173 DFDEDGVLKG-FKGPL-IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVD-EL 249 (277)
T ss_pred EECCCCeEeC-CCCCc-ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHH-HH
Confidence 995 899999 45653 367788876553 3441 1 22568999999999988663 33333 22221 12
Q ss_pred cccccCCCcee-eeCCCc
Q 043920 219 VTCDKLPKPII-FHDGRL 235 (504)
Q Consensus 219 ~A~~~~~W~i~-f~~~r~ 235 (504)
+.++...|-|+ -+|...
T Consensus 250 l~~y~~~~Divl~~D~t~ 267 (277)
T TIGR01544 250 LEKYMDSYDIVLVQDETL 267 (277)
T ss_pred HHHHHHhCCEEEECCCCc
Confidence 44556678887 666643
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=90.31 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHcchh---hh--cccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCe
Q 043920 88 LRVTDIESVARAVLPKF---YA--SDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGR 158 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~---~~--~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~ 158 (504)
.+.++++++.+.+.+.+ +. ..++|++.+ .++++|..+ |+|++....++.+.++ +|+...+..-
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~------- 131 (213)
T TIGR01449 60 PDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVL------- 131 (213)
T ss_pred cChHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEE-------
Confidence 45555555555443321 11 135666544 777899776 6899999999999999 8874322111
Q ss_pred eeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCee
Q 043920 159 ATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 159 ~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+++.-.+ .+.-+.+.++..+...+ -.+++|||.+|+++.+.+|-+++
T Consensus 132 ~~~~~~~----~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 132 IGGDSLA----QRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred EecCCCC----CCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 1110000 11112334444333222 25689999999999999998765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.8e-08 Score=102.75 Aligned_cols=173 Identities=18% Similarity=0.161 Sum_probs=115.6
Q ss_pred CCCcEEEEecCCCCChHHHHHHhhCC----CccEEE-e--cccchhhhhccCceeEeecCChhh-------HHHHHHHhh
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVALGR----PIPTVT-Y--SVSRLSEIISPIKAVRLSRDRATD-------ASTIKKLLE 364 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~~~----~~~~v~-k--~~~~~~~~~~~~g~i~i~R~~~~~-------~~~~~~~l~ 364 (504)
+..+.|+|.-|.|++|.+++..++-. |....+ - +.|.+|.+++..|++||.|+-... .+-+.+..+
T Consensus 294 ~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~ 373 (810)
T COG2937 294 DGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFS 373 (810)
T ss_pred cCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccccCccchHHHHhccceEEEeccCCChhHHHHHHHHHHHHHh
Confidence 46789999999999999999887632 212222 2 378899999999999999975543 234556677
Q ss_pred cC-CEEEEcCceeeCCCccccccccc----cc-------cCCeEEEEEEEccccCccccc---c-CCCCCCccccc----
Q 043920 365 EG-DLAMCPEGTTCREPFLLRFSALF----AE-------LTDELVPVAMVNRMSMFHGTT---A-RGWKGMDPFYF---- 424 (504)
Q Consensus 365 ~G-~l~IFPEGTrs~~~~l~~Fk~G~----~~-------~~~pIvPV~i~~~~~~~~~~~---~-~~~~~~~~~~~---- 424 (504)
+| ++--|=||+||++|.|++-|.|. .+ --+-+|||.|.|...+--++. . +.-+-.+.+++
T Consensus 374 rgysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIgYe~v~Ev~tYa~ElrGa~K~kE~~~~l~r~ 453 (810)
T COG2937 374 RGYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILLVPVYIGYEHVHEVGTYAKELRGATKEKESLRWLLRV 453 (810)
T ss_pred CCcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEEEeeEeehhhHhhHHHHHHHhcCCcCCcccHHHHHHH
Confidence 89 99999999999999999999994 11 135678999999532211100 0 11222222222
Q ss_pred c-----ccCCCeEEEEEecCcCCccccC-------CC-----------CCHHHHHHHHHHHHHHHcCCCcC
Q 043920 425 F-----MNPCPAYEVTFLNKLPMELTCG-------SG-----------KSSHEVANYIQRVIAATLSYEST 472 (504)
Q Consensus 425 ~-----~~p~~~v~V~~l~pi~~~~~~~-------~~-----------~~~~~la~~v~~~i~~~l~~~~t 472 (504)
+ .+-|. +-|.|++||+...+-+ ++ .+.+.++.+|+..|.++-.+..+
T Consensus 454 i~aqk~Rn~Gq-~yVnFGEPi~L~qyL~~~~pew~~d~~~~~kp~w~~~tvn~ia~~V~~rIN~AaaVna~ 523 (810)
T COG2937 454 IKAQKLRNLGQ-GYVNFGEPIPLRQYLNQHVPEWRQDPIEEEKPAWLTPTVNKIAFDVMVRINNAAAVNAM 523 (810)
T ss_pred HHHHhhhhcCc-EEEeCCCCccHHHHhcccChhhhhCcccccCcccccHHHHHHHHHHHHHhhccccCCHH
Confidence 1 12344 8899999998765410 11 23456788888888776555443
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.8e-07 Score=87.58 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHHcchhh-----hcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCC
Q 043920 87 GLRVTDIESVARAVLPKFY-----ASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKG 157 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g 157 (504)
..+.++++++.+.+...+. ....+|++. +.++++|+.+ ++|++.+..++++++. +|++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~------- 138 (226)
T PRK13222 67 EPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSV------- 138 (226)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccE-------
Confidence 4566777666655443221 123555554 4777889776 6899999999999998 887543211
Q ss_pred eeeeeEeCCCCCCchh--HHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCee
Q 043920 158 RATGLVRDPGVLVGNK--KADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 158 ~~tG~i~g~~~l~g~~--Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.+++. . .+.. |.+.++..+...+ -.+.+|||.+|+.+.+.+|-..+
T Consensus 139 ~~~~~-----~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 139 VIGGD-----S-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred EEcCC-----C-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 11111 1 1122 2333443333222 25689999999999999998543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.7e-08 Score=83.61 Aligned_cols=93 Identities=20% Similarity=0.214 Sum_probs=55.5
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeC-CeeeeeEeCCCCCCc---hhHHHHHHHHhC
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYK-GRATGLVRDPGVLVG---NKKADALLKAFG 183 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~-g~~tG~i~g~~~l~g---~~Kv~~l~~~~~ 183 (504)
.++.++++|..+ ++|++....++.+++. +|+ +.++++...... +.-.+......+..+ .++.+.+.+.++
T Consensus 32 ~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (139)
T cd01427 32 ALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG 110 (139)
T ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC
Confidence 344677788766 5899999999999999 886 556655533210 000111111111122 334444444444
Q ss_pred CC-CCeEEEeCCCCCHHHHhhccc
Q 043920 184 ET-QPEIGLGDRQTDIPFMALCKE 206 (504)
Q Consensus 184 ~~-~~~~aygDS~~DlpmL~~a~~ 206 (504)
.. .-.+++|||.+|+++++.++.
T Consensus 111 ~~~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 111 VDPEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CChhhEEEeCCCHHHHHHHHHcCC
Confidence 32 235689999999999998543
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=7e-07 Score=88.73 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=87.8
Q ss_pred ccCCCcceEEEEecCCccccCCCcHHH-HHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHh------c
Q 043920 14 SSIGREKHTVVADMDGTLLRGRSSFPY-FALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASF------V 86 (504)
Q Consensus 14 ~~~~~~~~~a~FD~DgTL~~~ds~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~ 86 (504)
.-|+|=.++++||+||||+++...+.- +.....+.+...... ....... ... ........+ .
T Consensus 7 ~~~~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~--------~~~~~~~-g~~--~~~~~~~~l~~~~~~~ 75 (272)
T PRK13223 7 LFPGRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGL--------EAVRHWV-GNG--APVLVRRALAGSIDHD 75 (272)
T ss_pred hCCCccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCH--------HHHHHHh-Chh--HHHHHHHHhccccccc
Confidence 346788889999999999997543221 111111211110000 0000000 111 111222222 1
Q ss_pred CCCHHHHHHHHHHHcchhh----hcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCe
Q 043920 87 GLRVTDIESVARAVLPKFY----ASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGR 158 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~----~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~ 158 (504)
+.+.+..+++.+.|.+.+. ...++|++. +.++++|..+ |+|++++..++++.++ +|++..... +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~-i------ 147 (272)
T PRK13223 76 GVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRW-I------ 147 (272)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeE-E------
Confidence 3454555554444433211 112456554 4777889766 6899999999999998 887543221 1
Q ss_pred eeeeEeCCCCCCchhHHHHHHH---HhCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 159 ATGLVRDPGVLVGNKKADALLK---AFGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 159 ~tG~i~g~~~l~g~~Kv~~l~~---~~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
+++.-.+ .+.-|.+.++. .++.. +-.+++||+.+|+.+.+.+|-..
T Consensus 148 ~~~d~~~----~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 148 IGGDTLP----QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EecCCCC----CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence 1111000 11112233333 33322 22568999999999999998753
|
|
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.2e-06 Score=86.37 Aligned_cols=160 Identities=13% Similarity=0.167 Sum_probs=99.2
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh-CCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
+++++|.|+++.. ..+++++|++++|.+.+|........ ..++..+++. .+.+-.++.. .|.-.++. ...
T Consensus 96 ~v~i~g~e~l~~a-~~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~~n~~~~~~~~~~R~~~g~~~i~~--~~~ 172 (298)
T PRK08419 96 KVTFINEENLLDA-LKKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLLKSAPINEMISKRREQFGIELIDK--KGA 172 (298)
T ss_pred cEEEECHHHHHHH-HHcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCCCChHHHHHHHHHHHHcCCeeEEC--ccH
Confidence 6788999886511 01378999999999999998754433 3477778775 3444444322 34434432 235
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCccc-------cccccc----cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLL-------RFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~-------~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
+..+.+.|++| .++++|....+ .++... .+.+|. .+.++||+||.+....
T Consensus 173 ~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~----------------- 235 (298)
T PRK08419 173 MKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD----------------- 235 (298)
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC-----------------
Confidence 77888899999 89999955543 334334 445662 4679999999985321
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
.+ .++|+|.+|++.+...+..++.++.++++-+.+++...
T Consensus 236 -----~~-~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir 275 (298)
T PRK08419 236 -----YS-HFTITFFPPIRSKITDDAEADILEATQAQASACEEMIR 275 (298)
T ss_pred -----CC-eEEEEEcCCccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 01 27889999997642211112344455555555555543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=83.16 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=56.6
Q ss_pred HHHHHHHhhCCCEE-EEecC----cHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC
Q 043920 111 PESWRVFSSCGKRC-VLTAN----PRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET 185 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas----~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~ 185 (504)
.+++++|+++|+.+ +||+. ++..++.+.+. +|+++... + .++|...+.+ -.+|..++ .+.
T Consensus 120 ~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~--~-----i~~~d~~~~~---Kp~~~~~l----~~~ 184 (237)
T TIGR01672 120 RQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNP--V-----IFAGDKPGQY---QYTKTQWI----QDK 184 (237)
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchhee--E-----EECCCCCCCC---CCCHHHHH----HhC
Confidence 45677899999887 68998 88899999999 99975331 1 1222222211 12343333 345
Q ss_pred CCeEEEeCCCCCHHHHhhcccCe
Q 043920 186 QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 186 ~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
++.++||||.+|+.--+.+|...
T Consensus 185 ~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 185 NIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred CCeEEEeCCHHHHHHHHHCCCCE
Confidence 66789999999999888888773
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.36 E-value=9.3e-06 Score=79.54 Aligned_cols=88 Identities=13% Similarity=0.029 Sum_probs=54.9
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|.+ +++++++|..+ |+|++....++...+. +|++ .+++++-. + . ..| ..+ -.....+
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~---~--~---~KP---~p~-~~~~a~~ 175 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSEC---E--H---AKP---HPD-PYLKALE 175 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcC---C--C---CCC---ChH-HHHHHHH
Confidence 34555 45778899776 6999999999999999 8864 44444310 0 0 011 111 1122222
Q ss_pred HhCCC-CCeEEEeCCCCCHHHHhhcccCee
Q 043920 181 AFGET-QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.++.. .-.+.+|||..|+..-+.+|-.++
T Consensus 176 ~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 176 VLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred HhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 33322 225689999999999999988764
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.7e-06 Score=79.53 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=55.0
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
++|++ +++++++|..+ |+|++....++.+.+. +|++..+..-+.. +. .+. ..|+ .+-...+.+.++.
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~-~~--~~~-~KP~----p~~~~~~~~~l~~ 166 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRCAVLIGG-DT--LAE-RKPH----PLPLLVAAERIGV 166 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhcccEEEec-Cc--CCC-CCCC----HHHHHHHHHHhCC
Confidence 45554 55788899776 6899999999988888 8875432111100 00 010 0110 1122333333443
Q ss_pred CC-CeEEEeCCCCCHHHHhhcccCee
Q 043920 185 TQ-PEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 185 ~~-~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.. -.+.+|||.+|+.+-+.+|-..+
T Consensus 167 ~p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 167 APTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred ChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 22 25689999999999999998754
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.5e-06 Score=79.65 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=55.0
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH---HH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL---KA 181 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~---~~ 181 (504)
++|.+ +++++++|..+ |+|++.+..++.+.+. +|++..+-.-+..++ .+ .+.-|.+.++ +.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-------~~----~~Kp~p~~~~~~~~~ 150 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDD-------VE----HAKPDPEPVLKALEL 150 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCc-------CC----CCCCCcHHHHHHHHH
Confidence 44555 44777899776 6899999999999999 897543322111110 00 1111222333 33
Q ss_pred hCCC-CCeEEEeCCCCCHHHHhhcccCee
Q 043920 182 FGET-QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 182 ~~~~-~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
++.. .-.+.+|||.+|+..-+.+|-..+
T Consensus 151 ~~~~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 151 LGAKPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 3322 125689999999999999998754
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.6e-05 Score=74.60 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=53.6
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE----EEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL----VLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~----vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++|++ ++.++++|..+ |+|++....++...+. +|++. +++++- .+ .+.-+.+.++.
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~-----------~~----~~KP~~~~~~~ 158 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEE-----------EG----VEKPHPKIFYA 158 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEecc-----------CC----CCCCCHHHHHH
Confidence 55555 45777889776 6899998888888888 88743 333221 11 01112223333
Q ss_pred H---hCCCC-CeEEEeCCC-CCHHHHhhcccCe-eeC
Q 043920 181 A---FGETQ-PEIGLGDRQ-TDIPFMALCKEGY-LVP 211 (504)
Q Consensus 181 ~---~~~~~-~~~aygDS~-~DlpmL~~a~~~~-~Vn 211 (504)
. ++... -.+.+|||. +|+..-+.+|-.. .|+
T Consensus 159 ~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 159 ALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 3 33221 256899997 8999999998654 444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1e-05 Score=74.97 Aligned_cols=107 Identities=10% Similarity=0.102 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHH---Hcchhhh---cccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeE
Q 043920 87 GLRVTDIESVARA---VLPKFYA---SDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEI 152 (504)
Q Consensus 87 G~~~~~l~~~~~~---~~~~~~~---~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l 152 (504)
+.+.++++++.+. ++.+.+. ..++|++.+ +++++|..+ ++|++ ..++.+.+. +|++ .+++++-
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~ 137 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADE 137 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhh
Confidence 5677777665543 2222221 235666654 777889776 58887 567888888 8864 4444321
Q ss_pred EEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 153 ATYKGRATGLVRDPGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 153 ~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
. + . ..++ .+-...+.+.++.. .-.+.+|||..|+..-+.+|-..
T Consensus 138 ~---~----~-~kp~----~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 138 V---K----E-GKPH----PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred C---C----C-CCCC----hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 0 0 0 0110 11122233333322 12568999999999988887654
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.8e-05 Score=74.53 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=54.8
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|..+ |+|.++..+++...+. +|+ |.+++++- + |.- .|+ .+--+.+.+
T Consensus 93 ~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~-~------~~~-KP~----~~~~~~~~~ 159 (198)
T TIGR01428 93 PHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADA-V------RAY-KPA----PQVYQLALE 159 (198)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhh-c------CCC-CCC----HHHHHHHHH
Confidence 44555 55778889776 6899999999999998 886 44554431 0 100 110 111122223
Q ss_pred HhCCC-CCeEEEeCCCCCHHHHhhcccCe-eeCC
Q 043920 181 AFGET-QPEIGLGDRQTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vnp 212 (504)
.++.. .-.+.+|||..|+.--+.+|-.. .|++
T Consensus 160 ~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 160 ALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred HhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence 33432 12468999999999888877653 3443
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.7e-05 Score=75.86 Aligned_cols=106 Identities=19% Similarity=0.171 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHcchhh---h---cccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc--E----EEee
Q 043920 87 GLRVTDIESVARAVLPKFY---A---SDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD--L----VLGT 150 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~---~---~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d--~----vigt 150 (504)
|.+.++++++.++|...+. . ..++|++. ++++++|..+ |+|++....++.+.+. +|++ . ++++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 60 GADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDVDAVVCP 138 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccCCEEEcC
Confidence 5666666555554433221 1 13555554 4778889776 6999999999999998 7764 2 3332
Q ss_pred eEEEeCCeeeeeEeCCCCCCchhHHHHHHH---HhCCC--CCeEEEeCCCCCHHHHhhcccCe
Q 043920 151 EIATYKGRATGLVRDPGVLVGNKKADALLK---AFGET--QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 151 ~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~---~~~~~--~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
.-. + .+.-+.+.++. .++.. .-.+.+|||..|+..-+.+|-++
T Consensus 139 ~~~-----------~----~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 139 SDV-----------A----AGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CcC-----------C----CCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 210 0 01112233333 33432 22578999999999999999987
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.2e-06 Score=78.11 Aligned_cols=91 Identities=19% Similarity=0.168 Sum_probs=56.1
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC-CeE
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ-PEI 189 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~-~~~ 189 (504)
+++++++++|... |+|+-++..++.+++. +|++..+...+..++ ..-..|+. .-+..+.+.++... -.+
T Consensus 96 e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~----~~~~KP~P----~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 96 ELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDD----VPPPKPDP----EPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred HHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCC----CCCCCcCH----HHHHHHHHHhCCChhheE
Confidence 4455888999665 7999999999999999 897543332221100 00011111 22233333344331 247
Q ss_pred EEeCCCCCHHHHhhcccC-eeeC
Q 043920 190 GLGDRQTDIPFMALCKEG-YLVP 211 (504)
Q Consensus 190 aygDS~~DlpmL~~a~~~-~~Vn 211 (504)
.+|||.+|+.+-+.|+-+ +.|.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~ 189 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVT 189 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEE
Confidence 899999999999999955 3343
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.1e-06 Score=79.39 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=58.8
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEEEeCCeeeeeEeCCCCCCchhH--HHHHHH
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIATYKGRATGLVRDPGVLVGNKK--ADALLK 180 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~~~~g~~tG~i~g~~~l~g~~K--v~~l~~ 180 (504)
.++|++ ++.++++|..+ ++||.....++.+++. +|++. .+..+.. + ..+.| .+.+++
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~~~~v~a~~~-----------~----kP~~k~~~~~i~~ 190 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIFDSIVFARVI-----------G----KPEPKIFLRIIKE 190 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSCSEEEEESHE-----------T----TTHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccccccccccccc-----------c----cccchhHHHHHHH
Confidence 345555 55788999665 6899999999999999 99943 2222211 1 34578 778887
Q ss_pred HhCCCCCeEEEeCCCCCHHHHhhcc
Q 043920 181 AFGETQPEIGLGDRQTDIPFMALCK 205 (504)
Q Consensus 181 ~~~~~~~~~aygDS~~DlpmL~~a~ 205 (504)
+--..+..+++||+.||.+|++.||
T Consensus 191 l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 191 LQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HhcCCCEEEEEccCHHHHHHHHhCc
Confidence 5323345678999999999999886
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-05 Score=74.35 Aligned_cols=180 Identities=17% Similarity=0.147 Sum_probs=99.3
Q ss_pred ccccCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHH-HHHhhccccccHHHHHHHHHH-hcCCC
Q 043920 12 KCSSIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPI-AGLLYYLVSESAGIQVLIFAS-FVGLR 89 (504)
Q Consensus 12 ~~~~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~-~~G~~ 89 (504)
+++.-+..+.+++||||.||++.||-. |....+ +.-.....+...+|. .|.- . +.+++... =.|.+
T Consensus 5 ~~s~~~~~ril~~FDFD~TIid~dSD~-wVv~~l---p~~~l~~qL~~t~p~~~Wne-------~-M~rv~k~Lheqgv~ 72 (256)
T KOG3120|consen 5 RGSASSSPRILLVFDFDRTIIDQDSDN-WVVDEL---PTTDLFNQLRDTYPKGFWNE-------L-MDRVFKELHEQGVR 72 (256)
T ss_pred ccccccCCcEEEEEecCceeecCCcch-HHHHhc---ccchhHHHHHHhcccchHHH-------H-HHHHHHHHHHcCCC
Confidence 344445577899999999999999943 322111 111111112222221 1100 0 22222211 46899
Q ss_pred HHHHHHHHHHHcchhhhcccCHHHHH---HHhhCCC-E-EEEecCcHHHHHHHHHhhcCCc----EEEeeeEEEe-CCee
Q 043920 90 VTDIESVARAVLPKFYASDLHPESWR---VFSSCGK-R-CVLTANPRIMVEAFLKDFLAAD----LVLGTEIATY-KGRA 159 (504)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~-~-vvvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~-~g~~ 159 (504)
.+++.+..+.. + +.|.+++ .+++.|+ . +|||-+..+.++.+.+. +|+. .+..+.-.++ +|++
T Consensus 73 ~~~ik~~~r~i-P------~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L 144 (256)
T KOG3120|consen 73 IAEIKQVLRSI-P------IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRL 144 (256)
T ss_pred HHHHHHHHhcC-C------CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcE
Confidence 99998766653 4 5566665 4557884 4 46999999999999999 8974 4555555554 5655
Q ss_pred eeeEeC--CCCCCc---hhHHHHHHHHhC---CCCCe----EEEeCCCCCH-HHHhhcccCeeeC
Q 043920 160 TGLVRD--PGVLVG---NKKADALLKAFG---ETQPE----IGLGDRQTDI-PFMALCKEGYLVP 211 (504)
Q Consensus 160 tG~i~g--~~~l~g---~~Kv~~l~~~~~---~~~~~----~aygDS~~Dl-pmL~~a~~~~~Vn 211 (504)
.=+-.. ..|... -=|-..|.++.. ..++. ++.||+.||. |++.+...=|+-.
T Consensus 145 ~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 145 LVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred EeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 422111 112100 013334444321 12332 3689999997 7777666655544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.1e-05 Score=73.18 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=49.0
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ 186 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~ 186 (504)
+.++.++++ +.+ |+|++++..++.+.+. +|++ .+++++-. + .+.-+.+.+.......+
T Consensus 94 e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~-------~--------~~KP~p~~~~~~~~~~~ 156 (188)
T PRK10725 94 EVVKAWHGR-RPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDV-------Q--------HHKPAPDTFLRCAQLMG 156 (188)
T ss_pred HHHHHHHhC-CCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhc-------c--------CCCCChHHHHHHHHHcC
Confidence 334455544 444 6899999999999999 8874 44443310 0 11123334444333222
Q ss_pred C----eEEEeCCCCCHHHHhhcccCe
Q 043920 187 P----EIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 187 ~----~~aygDS~~DlpmL~~a~~~~ 208 (504)
. .+.+|||..|+.--+.+|-.+
T Consensus 157 ~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 157 VQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred CCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 2 568999999999888887654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=5e-06 Score=81.99 Aligned_cols=86 Identities=13% Similarity=0.204 Sum_probs=55.1
Q ss_pred EEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEe----C-C--eeeeeEeCCCCCC---chhHHHHHH---HHhCCC--C-
Q 043920 123 RCVLTANPRIMVEAFLKDFLAADLVLGTEIATY----K-G--RATGLVRDPGVLV---GNKKADALL---KAFGET--Q- 186 (504)
Q Consensus 123 ~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~----~-g--~~tG~i~g~~~l~---g~~Kv~~l~---~~~~~~--~- 186 (504)
.++-+++.+.+ +..+++ .|+.-+-|.+.--. + + .+||.+...-. . +..|.++++ +.+... .
T Consensus 151 p~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~-~~~~~~dKg~A~~~L~~~y~~~~~~~ 227 (302)
T PRK12702 151 IFSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLA-AEPNSLPGEQAVQLLLDCYQRHLGPI 227 (302)
T ss_pred ceEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccc-cccCCCCHHHHHHHHHHHHHhccCCc
Confidence 34459998888 555555 68876666654311 1 1 45666543211 2 335655544 445443 2
Q ss_pred CeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 187 PEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 187 ~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
..+|.|||.||+|||+.|+.+++|.
T Consensus 228 ~tiaLGDspND~~mLe~~D~~vvi~ 252 (302)
T PRK12702 228 KALGIGCSPPDLAFLRWSEQKVVLP 252 (302)
T ss_pred eEEEecCChhhHHHHHhCCeeEEec
Confidence 3679999999999999999999994
|
|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.6e-06 Score=87.99 Aligned_cols=146 Identities=17% Similarity=0.166 Sum_probs=101.6
Q ss_pred CCcEEEEecCCCCChHHHHHHhhC---CCccEEEec----ccchhhhhccCceeEeecCCh------hh--H-----HHH
Q 043920 300 QTGVLFVCSHRTLLDPIFLSVALG---RPIPTVTYS----VSRLSEIISPIKAVRLSRDRA------TD--A-----STI 359 (504)
Q Consensus 300 ~~~~viVaNH~S~lD~~~l~~~~~---~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~------~~--~-----~~~ 359 (504)
+-|.||+.=|.|.+|-+++..++- -....++.- +|.+++++..+|++||.|.-. .+ . -.+
T Consensus 157 g~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi 236 (715)
T KOG3729|consen 157 GIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYI 236 (715)
T ss_pred CCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccchHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHH
Confidence 568999999999999998876652 123345542 899999999999999987421 11 1 235
Q ss_pred HHHhhcC-CEEEEcCceeeCCCccccccccc-------cc----cCCeEEEEEEEcccc---CccccccCCCCCCccccc
Q 043920 360 KKLLEEG-DLAMCPEGTTCREPFLLRFSALF-------AE----LTDELVPVAMVNRMS---MFHGTTARGWKGMDPFYF 424 (504)
Q Consensus 360 ~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~-------~~----~~~pIvPV~i~~~~~---~~~~~~~~~~~~~~~~~~ 424 (504)
.+.|++| ++=+|-|||||+.|.-.--|.|. ++ ..+-++||.+.|.+. .+.+.+.+..+..+.+|.
T Consensus 237 ~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~YdRiveG~f~~EQ~G~pK~~ES~~~ 316 (715)
T KOG3729|consen 237 EQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHGFIPDCLLVPVSYTYDRVVEGIFLHEQMGIPKVRESVLG 316 (715)
T ss_pred HHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcCCCCceEEEeeeccHHHHhhhhhhHHhcCCCCccHHHHH
Confidence 6788999 99999999999988777778883 22 246799999999653 233222233334444442
Q ss_pred --------cccCCCeEEEEEecCcCCccc
Q 043920 425 --------FMNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 425 --------~~~p~~~v~V~~l~pi~~~~~ 445 (504)
+......++|.|.+|++..++
T Consensus 317 v~rGi~~~L~kNYG~vR~DF~~P~Sl~Ey 345 (715)
T KOG3729|consen 317 VFRGIFSGLSKNYGVVRMDFGRPISLTEY 345 (715)
T ss_pred HHHHHHHHHhhcCCeEEEecCCCccHHHH
Confidence 222333489999999987543
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.7e-05 Score=76.33 Aligned_cols=105 Identities=20% Similarity=0.149 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHcch---hhhc--ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc-----EEEeeeEEE
Q 043920 89 RVTDIESVARAVLPK---FYAS--DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD-----LVLGTEIAT 154 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~---~~~~--~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d-----~vigt~l~~ 154 (504)
+.++++++.+.|... .+.+ .++|.+ ++.++++|..+ |+|+++...++.+.+. +|++ .+++++-.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~- 152 (253)
T TIGR01422 75 TEADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDV- 152 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccC-
Confidence 455666555544321 1111 345555 45777889776 6999999999999887 6653 33333210
Q ss_pred eCCeeeeeEeCCCCCCchhHHHHHHH---HhCCC--CCeEEEeCCCCCHHHHhhcccCee
Q 043920 155 YKGRATGLVRDPGVLVGNKKADALLK---AFGET--QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 155 ~~g~~tG~i~g~~~l~g~~Kv~~l~~---~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+ + +.-+.+.+.. .++.. .-.+.+|||.+|+..-+.+|-..+
T Consensus 153 ----------~--~--~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i 198 (253)
T TIGR01422 153 ----------P--A--GRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTV 198 (253)
T ss_pred ----------C--C--CCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEE
Confidence 0 0 1111222222 23421 225689999999999999996543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.6e-05 Score=73.86 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=55.7
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
++|++ +++++++|..+ |+|++....++...+. +|++..+-.-+..++ +..+.-|.+.+++....
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~-----------~~~~KP~~~~~~~~~~~ 143 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDE-----------VPRPKPAPDIVREALRL 143 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCc-----------CCCCCCChHHHHHHHHH
Confidence 45555 44777889665 6899999999999998 888533221111100 00112234444444332
Q ss_pred CCC----eEEEeCCCCCHHHHhhcccCee
Q 043920 185 TQP----EIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 185 ~~~----~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.++ .+.+|||.+|+...+.+|-+.+
T Consensus 144 ~~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 144 LDVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred cCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 222 5689999999999999998754
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.4e-06 Score=83.65 Aligned_cols=164 Identities=12% Similarity=0.136 Sum_probs=94.8
Q ss_pred CCCcEEEEecCCCCChHHHHHHhhCC-------CccEEEec----ccchhhhhcc--CceeEeecC---C----------
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVALGR-------PIPTVTYS----VSRLSEIISP--IKAVRLSRD---R---------- 352 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~~~-------~~~~v~k~----~~~~~~~~~~--~g~i~i~R~---~---------- 352 (504)
...++|++|||||..|+.++..++.. ++.||+-. .|...+|--. +=||+..+. .
T Consensus 199 ~g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~ 278 (426)
T PLN02349 199 QGHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKA 278 (426)
T ss_pred cCCCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHH
Confidence 45689999999999999988877642 24455542 2333332111 224544331 1
Q ss_pred -hhhHHHHHHHhhcC--CEEEEcCceeeCCCc------cccccccc--------cccCC--eEEEEEEEccccCcccccc
Q 043920 353 -ATDASTIKKLLEEG--DLAMCPEGTTCREPF------LLRFSALF--------AELTD--ELVPVAMVNRMSMFHGTTA 413 (504)
Q Consensus 353 -~~~~~~~~~~l~~G--~l~IFPEGTrs~~~~------l~~Fk~G~--------~~~~~--pIvPV~i~~~~~~~~~~~~ 413 (504)
.++++.++..|++| .++|||||||++... .-+|-+-. .++++ -+.|.++.....++...+.
T Consensus 279 N~kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl~~yDImPPP~~V 358 (426)
T PLN02349 279 NTRTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAMLSYDIMPPPPQV 358 (426)
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHHHhCccCCCcccc
Confidence 11255666778886 689999999996543 34444441 12344 5899999887766543321
Q ss_pred CCCCCCccccccccCCCeEEEEEecCcCCcccc----CCCCCHHHHHHHHHHHHHHH
Q 043920 414 RGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTC----GSGKSSHEVANYIQRVIAAT 466 (504)
Q Consensus 414 ~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~----~~~~~~~~la~~v~~~i~~~ 466 (504)
.. ...+- ... .++.|-+.+++-|+.++.+ ++.+.++++++.+.+.+.+.
T Consensus 359 Ek-eIGE~--R~v-~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~ 411 (426)
T PLN02349 359 EK-EIGER--RLV-GFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQ 411 (426)
T ss_pred cc-ccCce--eee-eeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 00 00000 111 2223778899999875442 12344567777777766654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2e-05 Score=78.33 Aligned_cols=86 Identities=21% Similarity=0.228 Sum_probs=55.1
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh--
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF-- 182 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~-- 182 (504)
++|++ +++++++|..+ |+|++.+..++.+.+. +|++..+-. + .++. . . ..|.+.++..+
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~~-v------i~~~-----~-~-~~k~~~~~~~l~~ 207 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFSV-V------QAGT-----P-I-LSKRRALSQLVAR 207 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheEE-E------EecC-----C-C-CCCHHHHHHHHHH
Confidence 45655 44777899766 6899999999999999 897543221 1 1111 0 0 01334444333
Q ss_pred -CCC-CCeEEEeCCCCCHHHHhhcccCee
Q 043920 183 -GET-QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 183 -~~~-~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+.. +-.+.+|||.+|+..-+.+|-..+
T Consensus 208 ~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 208 EGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred hCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 321 225689999999999999987754
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.6e-05 Score=74.58 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=54.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++|.+ ++.++++|..+ |+|++....++.+.+. +|++ .+++++- +..+.-+.+.+..
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d---------------~~~~KP~Pe~~~~ 173 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAED---------------VYRGKPDPEMFMY 173 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEeccc---------------CCCCCCCHHHHHH
Confidence 45555 44777889776 6899999999999998 8864 3444321 1011112333333
Q ss_pred HhCCCC----CeEEEeCCCCCHHHHhhcccCe
Q 043920 181 AFGETQ----PEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~~~~~~----~~~aygDS~~DlpmL~~a~~~~ 208 (504)
.+...+ -.+.+|||.+|+..-+.+|-.+
T Consensus 174 a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 174 AAERLGFIPERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHHHhCCChHHeEEEcCCHHHHHHHHHcCCEE
Confidence 333222 2568999999999999988765
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.3e-05 Score=79.66 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=55.3
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++|.+.+ .++++|..+ |+|+++...++.+.+. +|+ |.+++++-. + .+.-+.+.+..
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv-----------~----~~KP~Peifl~ 280 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDV-----------Y----RGKPDPEMFIY 280 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcC-----------C----CCCCCHHHHHH
Confidence 4565544 777899766 7999999999999999 886 445444311 0 11112233333
Q ss_pred H---hCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 181 A---FGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 181 ~---~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
. ++.. .-.+.+|||..|+..-+.+|-..+-
T Consensus 281 A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~Ig 314 (381)
T PLN02575 281 AAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVA 314 (381)
T ss_pred HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEE
Confidence 3 3321 2267899999999999988876543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.3e-05 Score=74.45 Aligned_cols=105 Identities=19% Similarity=0.123 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHcchh---hhc--ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC-----cEEEeeeEEE
Q 043920 89 RVTDIESVARAVLPKF---YAS--DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA-----DLVLGTEIAT 154 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~---~~~--~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-----d~vigt~l~~ 154 (504)
+.++++++.+.|...+ +.. ..+|.+ ++.++++|..+ |+|+++...++.+.+. +|+ |.+++++-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~- 154 (267)
T PRK13478 77 TEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDV- 154 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcC-
Confidence 4455555554443221 111 245554 55778899776 6899999999888886 554 333333210
Q ss_pred eCCeeeeeEeCCCCCCchhHHHHHHH---HhCCC--CCeEEEeCCCCCHHHHhhcccCee
Q 043920 155 YKGRATGLVRDPGVLVGNKKADALLK---AFGET--QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 155 ~~g~~tG~i~g~~~l~g~~Kv~~l~~---~~~~~--~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+ .+.-+.+.+.. .++.. .-.+.+|||.+|+..-+.+|-..+
T Consensus 155 ----------~----~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i 200 (267)
T PRK13478 155 ----------P----AGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTV 200 (267)
T ss_pred ----------C----CCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEE
Confidence 0 01112223333 23432 225689999999999999986543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.2e-05 Score=88.67 Aligned_cols=106 Identities=14% Similarity=0.142 Sum_probs=82.1
Q ss_pred hcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH
Q 043920 106 ASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA 181 (504)
Q Consensus 106 ~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~ 181 (504)
.+.++|++. +++|+.|.++ ++||.....++.+|++ +|+|++++ ++ .-++|.+.++++
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~a-----------------~~-~PedK~~~v~~l 504 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFIA-----------------EA-TPEDKIALIRQE 504 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEEc-----------------CC-CHHHHHHHHHHH
Confidence 334666664 4788999766 5899999999999999 99987654 13 568899999998
Q ss_pred hCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 182 FGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 182 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
..+......+||+.||.|+|+.|+.++++++.....+-|. .++.-|..+
T Consensus 505 q~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa-----divLldd~~ 553 (675)
T TIGR01497 505 QAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA-----NMVDLDSDP 553 (675)
T ss_pred HHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC-----CEEECCCCH
Confidence 6654455689999999999999999999997555554443 566555554
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.6e-05 Score=70.05 Aligned_cols=83 Identities=16% Similarity=0.123 Sum_probs=48.7
Q ss_pred ccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 108 DLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 108 ~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
..+|++. +.++++|..+ |+|++.. .+.+.+. +|++ .+++++- .+ ...-+.+.++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAE-----------IK----KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhh-----------cC----CCCCChHHHH
Confidence 3566654 4777889776 6787653 3566777 7864 3333220 00 1112334444
Q ss_pred HHhCCCCC----eEEEeCCCCCHHHHhhcccCe
Q 043920 180 KAFGETQP----EIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 180 ~~~~~~~~----~~aygDS~~DlpmL~~a~~~~ 208 (504)
....+.++ .+.+|||.+|+..-+.+|-..
T Consensus 149 ~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 149 AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 43333232 568999999999988887654
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.9e-05 Score=83.02 Aligned_cols=87 Identities=13% Similarity=0.051 Sum_probs=55.1
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
++|.+ +++++++|..+ |+|++....++.+.+. +|++..+..-+..++. .+..|.+.+...+..
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v------------~~~~kP~~~~~al~~ 397 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQI------------NSLNKSDLVKSILNK 397 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCC------------CCCCCcHHHHHHHHh
Confidence 45655 45778899776 6999999999999999 8975433222111110 001133333333322
Q ss_pred C--CCeEEEeCCCCCHHHHhhcccCe
Q 043920 185 T--QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 185 ~--~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
. .-.+.+|||.+|+..-+.+|-..
T Consensus 398 l~~~~~v~VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 398 YDIKEAAVVGDRLSDINAAKDNGLIA 423 (459)
T ss_pred cCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 1 22678999999999999999754
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.5e-05 Score=70.67 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=54.5
Q ss_pred ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 108 DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 108 ~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
.++|++.+ +++++ ..+ |+|++....++++.+. +|+ |.++++.-. |. ..|+ .+-.+.+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~---~~-----~KP~----~~~~~~~~ 162 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDA---GI-----QKPD----KEIFNYAL 162 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCcc---CC-----CCCC----HHHHHHHH
Confidence 35676654 66677 665 6899999999999998 887 444443310 10 0110 11122222
Q ss_pred HHh-CCC-CCeEEEeCCC-CCHHHHhhcccCe-eeCC
Q 043920 180 KAF-GET-QPEIGLGDRQ-TDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 180 ~~~-~~~-~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 212 (504)
+.+ +.. +-.+.+|||. +|+..-+.+|-.. .++.
T Consensus 163 ~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 163 ERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 233 321 2256899998 7999999988754 4454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.5e-06 Score=83.08 Aligned_cols=160 Identities=17% Similarity=0.173 Sum_probs=106.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh---CCCccEEEec-----ccchhhhhccCceeEeecCC
Q 043920 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL---GRPIPTVTYS-----VSRLSEIISPIKAVRLSRDR 352 (504)
Q Consensus 281 Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~---~~~~~~v~k~-----~~~~~~~~~~~g~i~i~R~~ 352 (504)
|+.|+-++..++.. +..+.|+++...|.|++|-+++..++ +-++..++-- +..++.+++..|+.|..|+-
T Consensus 132 g~yVNe~~~~~vr~--~~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk~mg~~LR~sGAFFMRRsF 209 (685)
T KOG3730|consen 132 GFYVNEASMANVRK--DMGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMKGMGTMLRKSGAFFMRRSF 209 (685)
T ss_pred ceeECHHHHHHHHH--HhccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhhHHHHHHHhcccceeeecc
Confidence 67777666555431 12567999999999999999887654 3344455432 56678889999999999976
Q ss_pred hhh-------HHHHHHHhhcC--CEEEEcCceeeCCCccccccccc--------cc---cCCeEEEEEEEcccc------
Q 043920 353 ATD-------ASTIKKLLEEG--DLAMCPEGTTCREPFLLRFSALF--------AE---LTDELVPVAMVNRMS------ 406 (504)
Q Consensus 353 ~~~-------~~~~~~~l~~G--~l~IFPEGTrs~~~~l~~Fk~G~--------~~---~~~pIvPV~i~~~~~------ 406 (504)
..+ .+-++..+.++ .+=.|-|||||+...-+.-|-|. +. ..+-||||.+.|...
T Consensus 210 g~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv~iVPVSv~YdkILEE~Ly 289 (685)
T KOG3730|consen 210 GNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDVMIVPVSVAYDKILEEQLY 289 (685)
T ss_pred CCceehHHHHHHHHHHHHhcCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCceEEEEeeecHHHHHHHHHH
Confidence 543 35566677888 79999999999887666667773 22 246799999999542
Q ss_pred ------Ccccccc-CCCCCCcccccc-ccCCCeEEEEEecCcCCccc
Q 043920 407 ------MFHGTTA-RGWKGMDPFYFF-MNPCPAYEVTFLNKLPMELT 445 (504)
Q Consensus 407 ------~~~~~~~-~~~~~~~~~~~~-~~p~~~v~V~~l~pi~~~~~ 445 (504)
.++...+ ++. +.....+ -+.|. +.+.||+||+..++
T Consensus 290 vYELLGvPKPKEST~gl--lKArkil~e~fGs-~fl~FGePISvr~~ 333 (685)
T KOG3730|consen 290 VYELLGVPKPKESTKGL--LKARKILDERFGS-MFLDFGEPISVREF 333 (685)
T ss_pred HHHHhCCCCcccchhHH--HHHHHHHHhhcCc-EEEecCCCccHHHH
Confidence 1222211 110 0000001 23455 89999999998765
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.2e-05 Score=69.62 Aligned_cols=109 Identities=6% Similarity=-0.058 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHcchhhhc--ccCHHHHH---HHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeee
Q 043920 88 LRVTDIESVARAVLPKFYAS--DLHPESWR---VFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGL 162 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~---~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~ 162 (504)
.+.++++++.+.|..+.+.. ..+|.+.+ .+++++..+++|++.....+...+. +|++...-.-. +..+++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f---~~i~~~~ 127 (197)
T PHA02597 52 CDQELAKKLIEKYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAF---SEVLMCG 127 (197)
T ss_pred ccHHHHHHHhhhhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcc---cEEEEec
Confidence 34555555555554322222 24565544 6666665555777665554445555 66542211000 0111111
Q ss_pred EeCCCCCCchhHHHHHHH---HhCCCCCeEEEeCCCCCHHHHhhc--ccCe
Q 043920 163 VRDPGVLVGNKKADALLK---AFGETQPEIGLGDRQTDIPFMALC--KEGY 208 (504)
Q Consensus 163 i~g~~~l~g~~Kv~~l~~---~~~~~~~~~aygDS~~DlpmL~~a--~~~~ 208 (504)
. . ..|.+.++. .++ ....+++|||.+|+.--..+ |-.+
T Consensus 128 ~----~---~~kp~~~~~a~~~~~-~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 128 H----D---ESKEKLFIKAKEKYG-DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred c----C---cccHHHHHHHHHHhC-CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 1 1 123443333 344 23466899999998777776 6554
|
2 hypothetical protein; Provisional |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0001 Score=70.68 Aligned_cols=88 Identities=16% Similarity=0.122 Sum_probs=51.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc---EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH--
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD---LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL-- 179 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d---~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~-- 179 (504)
++|.+ ++.++++|..+ |+|.+....++...+. +|+. .+++.+- . +. ..| +.+.+.
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~~~~~i~~~~~------~-~~-~KP-------~p~~~~~~ 147 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLPAPEVFVTAER------V-KR-GKP-------EPDAYLLG 147 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCCCccEEEEHHH------h-cC-CCC-------CcHHHHHH
Confidence 45655 44778899666 6898887777776666 6653 2332210 0 00 011 112222
Q ss_pred -HHhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 180 -KAFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 180 -~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
+.++.. .-.+.+|||..|+..-+.+|-. ++|+.
T Consensus 148 ~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 148 AQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred HHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 223432 2256899999999999998864 56653
|
|
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.98 E-value=8.8e-05 Score=68.60 Aligned_cols=150 Identities=13% Similarity=0.196 Sum_probs=94.2
Q ss_pred CCCcEEEEecCCCCChHHHHHHhhCCCccEEEe-c-c-cchhhhhccCceeEe----ecCChhhHHHHHHHhhcC-CEEE
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTY-S-V-SRLSEIISPIKAVRL----SRDRATDASTIKKLLEEG-DLAM 370 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k-~-~-~~~~~~~~~~g~i~i----~R~~~~~~~~~~~~l~~G-~l~I 370 (504)
+.+|+|+..=|.=.+=.+++..-. +++..+.. + . -....++..+|..-| +++...++.++.+.|++| ++.|
T Consensus 44 ~~~p~I~afWHg~l~l~p~~~~~~-~~~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~i 122 (214)
T COG2121 44 NEKPGIVAFWHGQLALGPFAFPKG-KKIYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAI 122 (214)
T ss_pred ccCCeEEEEeccccccchhhccCC-CcEEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEE
Confidence 578999998887554333322211 23333332 2 1 223344445554444 233334578888999999 9999
Q ss_pred EcCceeeCCCccccccccc----cccCCeEEEEEEEccccCccccccCCCCCCccccccccCCCeEEEEEecCcCCcccc
Q 043920 371 CPEGTTCREPFLLRFSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTC 446 (504)
Q Consensus 371 FPEGTrs~~~~l~~Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~ 446 (504)
-|+|-+.. ...-.+|. ...++||+||++.+++ .+.-.+ |.-+ -++.|+..+++..++|+..+
T Consensus 123 tpDgPkGp---~~~~~~Gii~LA~~sg~pi~pv~~~~sr-~~~lKs---WDk~----~IP~PFgk~~i~~gePi~~~--- 188 (214)
T COG2121 123 TPDGPKGP---VHKIGDGIIALAQKSGVPIIPVGVATSR-CWRLKT---WDKT----IIPLPFGKIKIVLGEPIEVD--- 188 (214)
T ss_pred cCCCCCCC---ceeccchhhHhhHhcCCCeEEEEEeeee-eeeecc---cccc----cccCccceeEEEecCceeec---
Confidence 99987643 34456673 4579999999999976 333322 2111 35678877999999999987
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 043920 447 GSGKSSHEVANYIQRVIA 464 (504)
Q Consensus 447 ~~~~~~~~la~~v~~~i~ 464 (504)
.+.+.+++.++.++...
T Consensus 189 -~D~~~~~l~~~~~~~~~ 205 (214)
T COG2121 189 -ADKDKEELEEKRQEVSL 205 (214)
T ss_pred -ccccHHHHHHHHHHHHH
Confidence 47777777776554443
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.1e-05 Score=71.24 Aligned_cols=87 Identities=18% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP---- 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~---- 187 (504)
++++|+++|+.+ |+|+.+...++.+++. +|++..+... ..|.+.++++..+.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~~--------------------~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQGQ--------------------SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEecc--------------------cchHHHHHHHHHHcCCCHHH
Confidence 567888899887 6899999999999999 9998654210 1366666666544332
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeCCC-cchhccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVPSK-PEVKAVT 220 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vnp~-~~l~~~A 220 (504)
.+++|||.+|++|++.++.++++++. ..++..|
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a 128 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRA 128 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhC
Confidence 56899999999999999999999764 4454433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.4e-05 Score=70.77 Aligned_cols=185 Identities=13% Similarity=0.114 Sum_probs=106.2
Q ss_pred EEEecCCccccCCCcHHHHHHHHHHhcc-hHHHHHHHHhhHHHHHhhccccccHHHHHHH-HHHhcCCCHHHHHHHHHHH
Q 043920 23 VVADMDGTLLRGRSSFPYFALVAFEAGG-ILRLLFLLLASPIAGLLYYLVSESAGIQVLI-FASFVGLRVTDIESVARAV 100 (504)
Q Consensus 23 a~FD~DgTL~~~ds~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~l~~~~~~~ 100 (504)
.+||++|-+.-.|-.++.......+ +. +.+.+...-.+...-....-+.....++..+ +..-.|.+.++++++++.-
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~~pn-grrfF~~~SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~sE~s 81 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAVFPN-GRRFFSNLSEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRISELS 81 (315)
T ss_pred ccccCCCCCccchhHHHHHHHHcCC-HHHHHHhhhhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHHHhh
Confidence 6899999999888777765533221 21 2222211111100000000011112244222 2234599999999888865
Q ss_pred cchhhhcccCHHHHHHHhhCC---CEEEEecCcHHHHHHHHHhhcCC--cEEEeeeEEEeC-----C-e--eeeeEe---
Q 043920 101 LPKFYASDLHPESWRVFSSCG---KRCVLTANPRIMVEAFLKDFLAA--DLVLGTEIATYK-----G-R--ATGLVR--- 164 (504)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~G---~~vvvSas~~~~v~~ia~~~Lg~--d~vigt~l~~~~-----g-~--~tG~i~--- 164 (504)
+. +.|.+-+.++.-+ ..+|+|.|.+.+++.+|.. +|+ .++.||++..++ + + .--++.
T Consensus 82 a~------lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~ 154 (315)
T COG4030 82 AK------LVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIA 154 (315)
T ss_pred cc------cCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCCCccccccccccCccccCChHHHHHHHHhcCccc
Confidence 44 5676666554333 4578999999999999999 998 589999987752 1 1 001111
Q ss_pred ----------------------------CCCCCCchhHHHHHHHHhCCCCCe---EEEeCCCCCHHHHhhcc----cCee
Q 043920 165 ----------------------------DPGVLVGNKKADALLKAFGETQPE---IGLGDRQTDIPFMALCK----EGYL 209 (504)
Q Consensus 165 ----------------------------g~~~l~g~~Kv~~l~~~~~~~~~~---~aygDS~~DlpmL~~a~----~~~~ 209 (504)
+...+-|.+|++.++.+....+++ ...|||++|..||+.+. .+++
T Consensus 155 ~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAva 234 (315)
T COG4030 155 SLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVA 234 (315)
T ss_pred cccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEE
Confidence 111112344555555555444443 35899999999999764 4556
Q ss_pred eCCCcc
Q 043920 210 VPSKPE 215 (504)
Q Consensus 210 Vnp~~~ 215 (504)
.|....
T Consensus 235 FNGNeY 240 (315)
T COG4030 235 FNGNEY 240 (315)
T ss_pred ecCCcc
Confidence 666554
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.96 E-value=7.6e-05 Score=68.84 Aligned_cols=85 Identities=20% Similarity=0.203 Sum_probs=49.7
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++|++.+ .++++|..+ |+|+++... +.+..+ +|+ |.+++++-. | ...| ..+-.+.+.+
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~-------~-~~KP----~~~~~~~~~~ 151 (183)
T TIGR01509 86 PLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDV-------G-RGKP----DPDIYLLALK 151 (183)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCC-------C-CCCC----CHHHHHHHHH
Confidence 5566654 677889776 689999888 777776 776 444443210 0 0000 0112233333
Q ss_pred HhCCC-CCeEEEeCCCCCHHHHhhcccC
Q 043920 181 AFGET-QPEIGLGDRQTDIPFMALCKEG 207 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~~DlpmL~~a~~~ 207 (504)
.++.. +-.+.+|||..|+..-+.+|-.
T Consensus 152 ~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 152 KLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 34432 2256899999999888877754
|
HAD subfamilies caused by an overly broad single model. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0001 Score=71.13 Aligned_cols=87 Identities=20% Similarity=0.208 Sum_probs=53.7
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|+.+ |+|++....++...+. +|+ |.+++++-. +. ..|+ .+-...+.+
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~---~~-----~KP~----p~~~~~~~~ 160 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTF---GY-----PKED----QRLWQAVAE 160 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeC---CC-----CCCC----HHHHHHHHH
Confidence 45555 45778899776 6899988888888888 786 555555421 00 0110 111122223
Q ss_pred HhCCCC-CeEEEeCCCCCHHHHhhcccCe
Q 043920 181 AFGETQ-PEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~~~~~~-~~~aygDS~~DlpmL~~a~~~~ 208 (504)
.++... -.+++|||.+|+.--+.+|-..
T Consensus 161 ~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 161 HTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 334221 2578999999999988998864
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00057 Score=64.45 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHcchhhh---cccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCC
Q 043920 89 RVTDIESVARAVLPKFYA---SDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKG 157 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~---~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g 157 (504)
+.+++++..++++..... -.++|++.+ .++++|.++ |+|.+...+ +...+. +|+ |.++++.-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~-~~l~~~fd~i~~s~~----- 155 (203)
T TIGR02252 83 DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEA-LGLLEYFDFVVTSYE----- 155 (203)
T ss_pred CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHH-CCcHHhcceEEeecc-----
Confidence 345555555555432211 134565544 677889776 689887754 777787 786 44444331
Q ss_pred eeeeeEeCCCCCCchhHHHHHHHHhCCCC-CeEEEeCCC-CCHHHHhhcccC
Q 043920 158 RATGLVRDPGVLVGNKKADALLKAFGETQ-PEIGLGDRQ-TDIPFMALCKEG 207 (504)
Q Consensus 158 ~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~-~~~aygDS~-~DlpmL~~a~~~ 207 (504)
.|. ..|+ .+=.+.+.+.++... -.+.+|||. +|+..-+.+|-.
T Consensus 156 --~~~-~KP~----~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 --VGA-EKPD----PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred --cCC-CCCC----HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 010 0110 011122222333221 246899997 899888877754
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.5e-05 Score=74.84 Aligned_cols=157 Identities=17% Similarity=0.143 Sum_probs=101.3
Q ss_pred EEEE--cCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh-CCCccEEEecc--cchhhhh----ccCceeEee--cC
Q 043920 283 RVIV--KGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYSV--SRLSEII----SPIKAVRLS--RD 351 (504)
Q Consensus 283 ~v~v--~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~~--~~~~~~~----~~~g~i~i~--R~ 351 (504)
++++ +|.|++.... ..++++|+++.|.+.+|........ +.++.++.+.. +.+-.++ ...|.-.+. ++
T Consensus 89 ~v~i~~~g~e~l~~a~-~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 167 (298)
T PRK07920 89 RVRVSIEGLEHLDAAL-AAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERLKPESLYERFVAYRESLGFEVLPLTGG 167 (298)
T ss_pred hhhhccCCHHHHHHHH-hcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEeccCCHHHHHHHHHHHHhcCCEEEecCCC
Confidence 5667 8888764210 1457999999999999997644333 45777777652 2222222 224533343 22
Q ss_pred ChhhHHHHHHHhhcC-CEEEEcCceeeCCCcccc-------ccccc----cccCCeEEEEEEEccccCccccccCCCCCC
Q 043920 352 RATDASTIKKLLEEG-DLAMCPEGTTCREPFLLR-------FSALF----AELTDELVPVAMVNRMSMFHGTTARGWKGM 419 (504)
Q Consensus 352 ~~~~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~-------Fk~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~ 419 (504)
....+..+.+.|++| .+.+.|..+...++...+ +.+|. .+.++||+|+.+....
T Consensus 168 ~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~~-------------- 233 (298)
T PRK07920 168 ERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFEG-------------- 233 (298)
T ss_pred CchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEeC--------------
Confidence 234678889999999 899999998765444334 44552 4579999999987531
Q ss_pred ccccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 420 DPFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 420 ~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
.. ++|++.||++.. .+++.++.++++.+.+++...
T Consensus 234 ---------~~-y~v~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir 268 (298)
T PRK07920 234 ---------DG-WGFRVHPPLDVP----SAEDVAAMTQALADAFAANIA 268 (298)
T ss_pred ---------Ce-EEEEEeCCCCCC----chhHHHHHHHHHHHHHHHHHH
Confidence 12 678899998764 245566666666666666543
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00021 Score=67.21 Aligned_cols=82 Identities=20% Similarity=0.131 Sum_probs=48.2
Q ss_pred HHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-CCe
Q 043920 111 PESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET-QPE 188 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~~~ 188 (504)
+++++.++++|..+ |+|++++..++.+.+. +|++..+..-+..++. +. .+ .-+.-...+++ ++.. .-.
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~---~~--KP---~p~~~~~~~~~-~~~~~~~~ 181 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDC---PP--KP---NPEPLILAAKA-LGVEACHA 181 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCC---CC--Cc---CHHHHHHHHHH-hCcCcccE
Confidence 56777888889665 6899999999999999 8976444222111110 00 11 11111122222 3322 225
Q ss_pred EEEeCCCCCHHHHh
Q 043920 189 IGLGDRQTDIPFMA 202 (504)
Q Consensus 189 ~aygDS~~DlpmL~ 202 (504)
+.+|||.+|+..-+
T Consensus 182 i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 182 AMVGDTVDDIITGR 195 (197)
T ss_pred EEEeCCHHHHHHHH
Confidence 68999999986543
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00018 Score=75.01 Aligned_cols=85 Identities=15% Similarity=0.196 Sum_probs=52.7
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHH-hhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLK-DFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~-~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
++|.+ ++.++++|..+ |+|++....++...+ . +|+ |.+++++-. + .+.-+.+.++
T Consensus 94 l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v-----------~----~~KP~p~~~~ 157 (382)
T PLN02940 94 ALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEV-----------E----KGKPSPDIFL 157 (382)
T ss_pred CCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhc-----------C----CCCCCHHHHH
Confidence 45544 55777899665 689999988888776 5 665 555554411 0 1111223344
Q ss_pred HHhCCCC----CeEEEeCCCCCHHHHhhcccCee
Q 043920 180 KAFGETQ----PEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 180 ~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+.+.+.+ -.+.+|||.+|+..-+.+|-.++
T Consensus 158 ~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 158 EAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred HHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 3333222 25689999999999888886643
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00052 Score=65.67 Aligned_cols=110 Identities=11% Similarity=0.054 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHcchhhh--cccCHHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeC
Q 043920 89 RVTDIESVARAVLPKFYA--SDLHPESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRD 165 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g 165 (504)
+.+++.+.-++.+.+.+. -..+|.+.+.++.-+..+ |+|++....++...+. +|++..+...+ +++.-.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v------~~~~~~~ 139 (221)
T PRK10563 67 AKAELEPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKL------FSGYDIQ 139 (221)
T ss_pred CHHHHHHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceE------eeHHhcC
Confidence 456665443333222221 235677766666556554 6899999999999888 78743221111 1111001
Q ss_pred CCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCee
Q 043920 166 PGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 166 ~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.+.-+.+.+...+...++ .+.+|||.+|+.--+.+|-.++
T Consensus 140 ----~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 ----RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred ----CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 001123333333332222 4689999999988888887764
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00085 Score=67.19 Aligned_cols=92 Identities=17% Similarity=0.137 Sum_probs=52.7
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhH--HHHHHHH-
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKK--ADALLKA- 181 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~K--v~~l~~~- 181 (504)
++|.+.+ .++++|..+ |+|++....++.+.+. ++.+.... ...+ +++.- .+..| .+.+...
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~-~~~~----v~~~~------~~~~KP~p~~~~~a~ 212 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQ-GLDV----FAGDD------VPKKKPDPDIYNLAA 212 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccC-ceEE----Eeccc------cCCCCCCHHHHHHHH
Confidence 5676655 667889776 6899999999888876 43211100 0000 11111 11122 2233332
Q ss_pred --hCCCC-CeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 182 --FGETQ-PEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 182 --~~~~~-~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
++... -.+.+|||.+|+..-+.+|-.++.-+
T Consensus 213 ~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 213 ETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred HHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 33221 25689999999999999997665443
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0021 Score=61.51 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=53.5
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++. +.++ +|..+ |+|.+....++...+. +|+ |.+++++-. | . ..|+ .+-...+.+
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~---~----~-~KP~----p~~~~~~~~ 161 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQV---G----V-AKPD----VAIFDYALE 161 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECcc---C----C-CCCC----HHHHHHHHH
Confidence 456554 4666 57665 6899999999988888 886 445544311 0 0 0111 111222223
Q ss_pred HhCCC--CCeEEEeCCC-CCHHHHhhcccC-eeeCC
Q 043920 181 AFGET--QPEIGLGDRQ-TDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 181 ~~~~~--~~~~aygDS~-~DlpmL~~a~~~-~~Vnp 212 (504)
.++.. .-.+.+|||. +|+..-+.+|-. +.++.
T Consensus 162 ~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 162 QMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred HcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECC
Confidence 34422 2256899998 799999999876 45554
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=78.86 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=34.3
Q ss_pred chhHHHHHHHHhCCCCC----eEEE--eCCCCCHHHHhhcccCeeeC-CCcchhcc
Q 043920 171 GNKKADALLKAFGETQP----EIGL--GDRQTDIPFMALCKEGYLVP-SKPEVKAV 219 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~ay--gDS~~DlpmL~~a~~~~~Vn-p~~~l~~~ 219 (504)
|..|..+|+.+....++ .+++ |||.||++||+.|+.++++. |+.+.-.+
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~~~~~l 666 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGNKWHKM 666 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCCCCCcc
Confidence 44677777766443222 3455 99999999999999999995 55544333
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00018 Score=65.25 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeee
Q 043920 90 VTDIESVARAVLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATG 161 (504)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG 161 (504)
.+++.+...++.. .-....+|++.+ .++++|..+ ++|.+....++...++ +|+ |.+++++- .|.
T Consensus 60 ~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~---~~~--- 131 (176)
T PF13419_consen 60 PEEIQELFREYNL-ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDD---VGS--- 131 (176)
T ss_dssp HHHHHHHHHHHHH-HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGG---SSS---
T ss_pred HHHHHHHhhhhhh-hhccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccch---hhh---
Confidence 5555555555411 122345666654 667789776 5899999999999999 885 45555431 010
Q ss_pred eEeCCCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccC
Q 043920 162 LVRDPGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEG 207 (504)
Q Consensus 162 ~i~g~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~ 207 (504)
..+ ..+=.+.+.+.++.. .-.+.+|||..|+..-+.+|-.
T Consensus 132 --~Kp----~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 132 --RKP----DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp --STT----SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred --hhh----HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 011 011123333334432 2256899999999888777643
|
... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0018 Score=60.10 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=51.2
Q ss_pred cCHHHHHHHhhC-CCEEEEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH---H
Q 043920 109 LHPESWRVFSSC-GKRCVLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL---K 180 (504)
Q Consensus 109 ~~~~~~~~~~~~-G~~vvvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~---~ 180 (504)
.++.+.+.++.- +..+|+|.++...++.+.+. +|+ |.+++++-. +..+....-+.+.++ +
T Consensus 85 ~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~-----------~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 85 PDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTA-----------NPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecc-----------cCccCCCCCCHHHHHHHHH
Confidence 556776655542 34457899999999999998 887 445554321 100000011222333 3
Q ss_pred HhCCCC-CeEEEeCCCCCHHHHhhcccCe
Q 043920 181 AFGETQ-PEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~~~~~~-~~~aygDS~~DlpmL~~a~~~~ 208 (504)
.++... -.+.+|||..|+.--+.+|-..
T Consensus 153 ~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 153 EAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 344322 2468999999988877777553
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00039 Score=67.41 Aligned_cols=81 Identities=16% Similarity=0.101 Sum_probs=55.5
Q ss_pred HHHHHHhhCCCEE-EEec----CcHHHHHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 112 ESWRVFSSCGKRC-VLTA----NPRIMVEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSa----s~~~~v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
+.++.|+++|+.+ +||+ ..+..++.+.+. +|+ +...- + .++|.- . ..+.|..++++
T Consensus 121 elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~--v-----il~gd~----~-~K~~K~~~l~~---- 183 (237)
T PRK11009 121 QLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNP--V-----IFAGDK----P-GQYTKTQWLKK---- 183 (237)
T ss_pred HHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCccccee--E-----EEcCCC----C-CCCCHHHHHHh----
Confidence 3455788999887 5898 568899999998 898 54321 1 122221 1 23457666553
Q ss_pred CCCeEEEeCCCCCHHHHhhcccCee
Q 043920 185 TQPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 185 ~~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.++.+.||||.+|+..-+.||-..+
T Consensus 184 ~~i~I~IGDs~~Di~aA~~AGi~~I 208 (237)
T PRK11009 184 KNIRIFYGDSDNDITAAREAGARGI 208 (237)
T ss_pred cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence 4568899999999999888887753
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.002 Score=60.75 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=49.0
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++|++.+ .++++|.++ |+|.++...++.+...+.+ +|.++++.- + + .+.-+.+..+.
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~-~----------~----~~KP~p~~~~~ 149 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD-L----------G----MRKPEARIYQH 149 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc-c----------C----CCCCCHHHHHH
Confidence 5676655 667889766 6899988877665433123 455555542 1 1 11112333333
Q ss_pred H---hCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 181 A---FGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~---~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
. ++.. .-.+.+|||..|+.--+.+|-..
T Consensus 150 ~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 150 VLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 3 3322 12568999999987777777543
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00045 Score=62.79 Aligned_cols=102 Identities=21% Similarity=0.201 Sum_probs=59.4
Q ss_pred HHHHHHhhCCCEEE-EecCcHHHHH---HHHHhhc---C--Cc--EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 112 ESWRVFSSCGKRCV-LTANPRIMVE---AFLKDFL---A--AD--LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 112 ~~~~~~~~~G~~vv-vSas~~~~v~---~ia~~~L---g--~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
++++.++++|+.++ +||.+...++ ++.+. + | +. .++++.-... ..+++++.... ..+-|.+.|++
T Consensus 34 ~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~-~~~~~e~i~~~--~~~~K~~~l~~ 109 (157)
T smart00775 34 KLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLF-AALHREVISKK--PEVFKIACLRD 109 (157)
T ss_pred HHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcch-hhhhcccccCC--HHHHHHHHHHH
Confidence 34456677898875 8999988875 66655 2 2 22 3333332110 00233333221 12236666654
Q ss_pred ---HhCCC--CCeEEEeCCCCCHHHHhhcccC----eeeCCCcchh
Q 043920 181 ---AFGET--QPEIGLGDRQTDIPFMALCKEG----YLVPSKPEVK 217 (504)
Q Consensus 181 ---~~~~~--~~~~aygDS~~DlpmL~~a~~~----~~Vnp~~~l~ 217 (504)
++.+. .+..+|||..+|....+.++-+ +.|||+.+..
T Consensus 110 i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~ 155 (157)
T smart00775 110 IKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVH 155 (157)
T ss_pred HHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCccc
Confidence 44422 3344799999999999998865 5788877654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00047 Score=76.63 Aligned_cols=91 Identities=25% Similarity=0.341 Sum_probs=74.9
Q ss_pred hhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 105 YASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 105 ~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
+.+.++|++.+ .+|++|..+ ++||-.+..++.+|++ ||+|++++- + .-++|++.+++
T Consensus 534 ~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ae-----------------l-lPedK~~~V~~ 594 (713)
T COG2217 534 LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAE-----------------L-LPEDKAEIVRE 594 (713)
T ss_pred EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhecc-----------------C-CcHHHHHHHHH
Confidence 45567777655 889999666 4899999999999999 999988771 2 56899999999
Q ss_pred HhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCc
Q 043920 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 181 ~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 214 (504)
+..+.+.....||+.||.|=|..|+-.++++..-
T Consensus 595 l~~~g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 595 LQAEGRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred HHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 8754444557999999999999999999998733
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00027 Score=65.97 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=62.4
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP---- 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~---- 187 (504)
+++.++++|..+ |+|+.+...+++++++ +|+++++. | ++.|.+.+++++.+.++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~-----------g---------~~~k~~~l~~~~~~~gl~~~e 114 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ-----------G---------QSNKLIAFSDLLEKLAIAPEQ 114 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec-----------C---------CCcHHHHHHHHHHHhCCCHHH
Confidence 445566689776 6899999999999999 99876432 1 12477777777655443
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeCCCcch
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVPSKPEV 216 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 216 (504)
.+++|||.+|+++++.++.+++++....+
T Consensus 115 v~~VGDs~~D~~~a~~aG~~~~v~~~~~~ 143 (183)
T PRK09484 115 VAYIGDDLIDWPVMEKVGLSVAVADAHPL 143 (183)
T ss_pred EEEECCCHHHHHHHHHCCCeEecCChhHH
Confidence 46899999999999999999998754433
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00036 Score=76.53 Aligned_cols=90 Identities=22% Similarity=0.297 Sum_probs=69.2
Q ss_pred hcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH
Q 043920 106 ASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA 181 (504)
Q Consensus 106 ~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~ 181 (504)
...++|++ +++++++|..+ ++||..+..++.++++ +|++ +++ ++ ..+.|.+.++++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-~~~-----------------~~-~p~~K~~~v~~l 462 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-VRA-----------------EV-LPDDKAALIKEL 462 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-EEc-----------------cC-ChHHHHHHHHHH
Confidence 44567765 44788899776 5899999999999999 9996 221 12 456899999887
Q ss_pred hCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcc
Q 043920 182 FGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPE 215 (504)
Q Consensus 182 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~ 215 (504)
..+....+++||+.||.|+++.|+-+++++....
T Consensus 463 ~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~ 496 (562)
T TIGR01511 463 QEKGRVVAMVGDGINDAPALAQADVGIAIGAGTD 496 (562)
T ss_pred HHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCH
Confidence 6543445689999999999999999988885433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0011 Score=77.76 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=52.7
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc-----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD-----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d-----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
.+|.+.+ +++++|..+ |+|++....++...+. +|++ .+++.+- .+ .+.-+.+.+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~-----------~~----~~KP~Pe~~~ 225 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADA-----------FE----NLKPAPDIFL 225 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcc-----------cc----cCCCCHHHHH
Confidence 4666655 778899776 6899999999999988 7763 3333221 00 0111222333
Q ss_pred HH---hCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 180 KA---FGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 180 ~~---~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
+. ++.. .-.+.+|||..|+.--+.+|-..
T Consensus 226 ~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~ 258 (1057)
T PLN02919 226 AAAKILGVPTSECVVIEDALAGVQAARAAGMRC 258 (1057)
T ss_pred HHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 32 3322 12568999999999999888744
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00035 Score=64.27 Aligned_cols=88 Identities=18% Similarity=0.193 Sum_probs=64.8
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP---- 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~---- 187 (504)
+++.++++|..+ |+|+..+..++.+++. +|+.++... . . .|.+.++.++...++
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~-------~------k-------pkp~~~~~~~~~l~~~~~e 100 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEG-------I------K-------KKTEPYAQMLEEMNISDAE 100 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEec-------C------C-------CCHHHHHHHHHHcCcCHHH
Confidence 345667789776 6899999999999999 999754431 0 1 244455544433332
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+++|||.+|++|++.++.++++. ..+.++.+|.
T Consensus 101 v~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~ 135 (169)
T TIGR02726 101 VCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAA 135 (169)
T ss_pred EEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCC
Confidence 468999999999999999999996 4667887776
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0011 Score=59.48 Aligned_cols=76 Identities=17% Similarity=0.291 Sum_probs=45.8
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---hC
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA---FG 183 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~ 183 (504)
++++.++++|..+ |+|++....++.+.+. + + +.+++++ . + .+.-+.+.++.. ++
T Consensus 71 e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~-----~----------~-~~Kp~~~~~~~~~~~~~ 132 (154)
T TIGR01549 71 DLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSD-----E----------F-GAKPEPEIFLAALESLG 132 (154)
T ss_pred HHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecC-----C----------C-CCCcCHHHHHHHHHHcC
Confidence 4455778889776 6899999999988887 4 3 3333322 0 1 111123333333 34
Q ss_pred CCCCeEEEeCCCCCHHHHhhcc
Q 043920 184 ETQPEIGLGDRQTDIPFMALCK 205 (504)
Q Consensus 184 ~~~~~~aygDS~~DlpmL~~a~ 205 (504)
...-.+.+|||..|+..-+.+|
T Consensus 133 ~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 133 LPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCEEEEeCCHHHHHHHHHcc
Confidence 3232468999999988766553
|
HAD subfamilies caused by an overly broad single model. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00061 Score=75.58 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=80.2
Q ss_pred cccCHHHHH---HHhhCCCEEE-EecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPESWR---VFSSCGKRCV-LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~~~---~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.++|++.+ .+|+.|.+++ +||-...-++.+|++ +|+|+++| .+ ..|+|.+.++++-
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v~A-----------------~~-~PedK~~iV~~lQ 504 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFLA-----------------EA-TPEDKLALIRQEQ 504 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEEEc-----------------cC-CHHHHHHHHHHHH
Confidence 345666644 7889997664 899999999999999 99987654 13 6789999999986
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
.+.......||+.||.|-|+.|+-.++.+..-...+-|. .++.-|..+
T Consensus 505 ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA-----DiVLldd~~ 552 (679)
T PRK01122 505 AEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAG-----NMVDLDSNP 552 (679)
T ss_pred HcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC-----CEEEeCCCH
Confidence 543444468999999999999999999995445554444 466555554
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0014 Score=60.23 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=26.0
Q ss_pred cCHHHHHHHhhCCCEEEEecCcHHHHHHHHHhhcCCc
Q 043920 109 LHPESWRVFSSCGKRCVLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 109 ~~~~~~~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d 145 (504)
.+|++.+.++. ..|+|.+...+++...+. +|+.
T Consensus 91 ~~~g~~~~L~~---~~i~Tn~~~~~~~~~l~~-~~l~ 123 (175)
T TIGR01493 91 PWPDSAAALAR---VAILSNASHWAFDQFAQQ-AGLP 123 (175)
T ss_pred CCCchHHHHHH---HhhhhCCCHHHHHHHHHH-CCCH
Confidence 56888887762 346899999999999998 8863
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0016 Score=65.48 Aligned_cols=164 Identities=15% Similarity=0.166 Sum_probs=109.8
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCC-ccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRP-IPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~-~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
+++++|.|++... ..+++|+|+++-|...+|....+.....+ +..+.+. .|.+-+++.. .|.-.++++. ..
T Consensus 106 ~~~v~g~e~l~e~-l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~~np~ld~~i~~~R~r~~~~~~~~~~-~~ 183 (308)
T COG1560 106 RVEVEGLEHLEEA-LANGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPPKNPLLDWLITRGRERFGGRLLPRKG-EG 183 (308)
T ss_pred eeeecCHHHHHHH-HHcCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCCCCHHHHHHHHHHHHhcCCcccCCCc-hh
Confidence 5889999986421 11467999999999999999887764444 3555554 5555555433 3434445443 56
Q ss_pred HHHHHHHhhcC-CEEEEcCceeeCCCc-ccccccc-c----------cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTCREPF-LLRFSAL-F----------AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs~~~~-l~~Fk~G-~----------~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
++.+.+.|++| .+++-|+=..+.+.. -.+|-.- . ...+++|+|+......
T Consensus 184 ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r~~----------------- 246 (308)
T COG1560 184 IRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVRNP----------------- 246 (308)
T ss_pred HHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEEeC-----------------
Confidence 88899999999 899999988887765 3444221 1 3468999999877631
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCC
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRF 474 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~ 474 (504)
++..+++++.||.+-. ...|.++.++++-+.|++....--+++
T Consensus 247 -----~g~~y~l~i~p~~~~~----~~~D~~~~a~~mn~~~E~~I~~~PeQy 289 (308)
T COG1560 247 -----DGSGYTLHIHPPMTDD----PSEDVEADAQRMNDFVEKWIRAHPEQY 289 (308)
T ss_pred -----CCCeEEEEEeccccCC----CCCCHHHHHHHHHHHHHHHHHcChHHH
Confidence 1333889999876543 367777777777777766644333333
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00055 Score=75.04 Aligned_cols=91 Identities=23% Similarity=0.290 Sum_probs=70.0
Q ss_pred cccCHHHHH---HHhhCC-CEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH
Q 043920 107 SDLHPESWR---VFSSCG-KRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA 181 (504)
Q Consensus 107 ~~~~~~~~~---~~~~~G-~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~ 181 (504)
..++|++.+ +++++| ..+ ++||.++..++.++++ +|++++++. + ..++|.+.++++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~-----------------~-~p~~K~~~v~~l 443 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAE-----------------L-LPEDKLAIVKEL 443 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeecc-----------------C-CHHHHHHHHHHH
Confidence 346666644 788899 877 5899999999999999 999865541 2 456899988887
Q ss_pred hCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcch
Q 043920 182 FGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEV 216 (504)
Q Consensus 182 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l 216 (504)
.......+++||+.+|.|+++.|+-.++.+....+
T Consensus 444 ~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~ 478 (556)
T TIGR01525 444 QEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDV 478 (556)
T ss_pred HHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH
Confidence 54434456899999999999999988888743333
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00072 Score=77.70 Aligned_cols=89 Identities=22% Similarity=0.293 Sum_probs=69.6
Q ss_pred cccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.++|++. +.++++|..+ ++||..+..++.++++ +|++++++. + ..++|.+.++++.
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~-----------------~-~p~~K~~~i~~l~ 709 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAG-----------------V-LPDGKAEAIKRLQ 709 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeC-----------------C-CHHHHHHHHHHHh
Confidence 34566654 4778899776 5899999999999999 999865541 2 3467999999875
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCCCc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 214 (504)
.+....+++||+.||.|+|+.|+..++.+...
T Consensus 710 ~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 710 SQGRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred hcCCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 44333568999999999999999999998643
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00049 Score=75.05 Aligned_cols=86 Identities=20% Similarity=0.307 Sum_probs=68.1
Q ss_pred ccCHHH---HHHHhhCCC-EE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 108 DLHPES---WRVFSSCGK-RC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~-~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
.++|++ +++++++|. .+ ++||.++..++.++++ +|++++++. + ..++|.+.++++.
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~-----------------~-~p~~K~~~i~~l~ 422 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAE-----------------L-LPEDKLEIVKELR 422 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhc-----------------c-CcHHHHHHHHHHH
Confidence 456655 448889998 77 5899999999999999 999865431 2 3567999888875
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.+....+++||+.+|.|+++.|+.++++..
T Consensus 423 ~~~~~v~~vGDg~nD~~al~~A~vgia~g~ 452 (536)
T TIGR01512 423 EKYGPVAMVGDGINDAPALAAADVGIAMGA 452 (536)
T ss_pred hcCCEEEEEeCCHHHHHHHHhCCEEEEeCC
Confidence 544445689999999999999999888873
|
. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=72.95 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=79.3
Q ss_pred cccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.++|++.+ ++|+.|.++ ++||-...-++.+|++ +|+|++++ .+ .-|+|.+.++++.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A-----------------~~-~PedK~~iV~~lQ 500 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVA-----------------EC-KPEDKINVIREEQ 500 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEc-----------------CC-CHHHHHHHHHHHH
Confidence 346666644 788999766 4999999999999999 99987554 13 6789999999976
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
.+.......||+.||.|-|+.|+-.++++..-...+-|. .++.-|..+
T Consensus 501 ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAA-----DiVLldd~l 548 (673)
T PRK14010 501 AKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAA-----NLIDLDSNP 548 (673)
T ss_pred hCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhC-----CEEEcCCCH
Confidence 543333357999999999999999999995444554444 466555554
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0038 Score=69.43 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=79.2
Q ss_pred hhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 105 YASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 105 ~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
+.+.++|++ ++.||+.|.++ ++||-.+.-++.+|++ +|+|.|+|-- .-++|.+.+++
T Consensus 720 l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VGi~~V~aev------------------~P~~K~~~Ik~ 780 (951)
T KOG0207|consen 720 LEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VGIDNVYAEV------------------LPEQKAEKIKE 780 (951)
T ss_pred eccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hCcceEEecc------------------CchhhHHHHHH
Confidence 345677776 44899999776 4899999999999999 9999888722 45689999999
Q ss_pred HhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 181 AFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 181 ~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
...+.+.....||+.||-|=|..|+-.++++..-.....|.
T Consensus 781 lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaA 821 (951)
T KOG0207|consen 781 IQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAA 821 (951)
T ss_pred HHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhC
Confidence 87665656679999999999999999999998765555444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0082 Score=69.21 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=78.3
Q ss_pred cCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc---EEEeeeEEEe-CCeeee-----eEeCCCCCCchhHH
Q 043920 109 LHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD---LVLGTEIATY-KGRATG-----LVRDPGVLVGNKKA 175 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d---~vigt~l~~~-~g~~tG-----~i~g~~~l~g~~Kv 175 (504)
+++++ ++.+++.|.+++ +||-...-++.+|++ +|++ .+.|.+++.- +..+.. .+-.. + .-++|.
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr-~-~Pe~K~ 592 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDANDFLLGADIEELSDEELARELRKYHIFAR-L-TPMQKS 592 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEE-C-CHHHHH
Confidence 45544 558889997775 899999999999999 9995 2334333211 111110 11111 2 558999
Q ss_pred HHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 176 DALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 176 ~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
+.++.+-.........||+.||.|.|+.|+-.++++......+-|. .|+..|..+
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA-----DiVLldd~~ 647 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS-----DIILLEKSL 647 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC-----CEEEecCCh
Confidence 9999875443334478999999999999999999995444544333 366555544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0083 Score=60.23 Aligned_cols=159 Identities=13% Similarity=0.183 Sum_probs=102.6
Q ss_pred ceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHh-hCCCccEEEec--ccchhhhh----ccCceeEeecCCh
Q 043920 281 GVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVA-LGRPIPTVTYS--VSRLSEII----SPIKAVRLSRDRA 353 (504)
Q Consensus 281 Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~~~~~----~~~g~i~i~R~~~ 353 (504)
..+++++|.|++... ...++|+|+++-|...+|....... ...++..+.+. .+.+..++ ...|.-.|++++.
T Consensus 102 ~~~~~~~g~e~l~~a-~~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~~n~~~~~~~~~~R~~~g~~~i~~~~~ 180 (295)
T PF03279_consen 102 KKRVEIEGEEHLEAA-LAEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQKNPYIDRLLNKLRERFGIELIPKGEG 180 (295)
T ss_pred ceEEEEECHHHHHHH-HhcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCCccHhHHHHHHHHHHhcCCeEecchhh
Confidence 346889998876411 1157899999999999998665433 33455555554 34443333 2245555655443
Q ss_pred hhHHHHHHHhhcC-CEEEEcCceeeCC-Cccccc-------cccc----cccCCeEEEEEEEccccCccccccCCCCCCc
Q 043920 354 TDASTIKKLLEEG-DLAMCPEGTTCRE-PFLLRF-------SALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMD 420 (504)
Q Consensus 354 ~~~~~~~~~l~~G-~l~IFPEGTrs~~-~~l~~F-------k~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~ 420 (504)
+..+.+.|++| .+++.+......+ +.-.+| ..|. .+.++||+||.......
T Consensus 181 --~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~-------------- 244 (295)
T PF03279_consen 181 --IRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPD-------------- 244 (295)
T ss_pred --HHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCC--------------
Confidence 77888899999 8888888765433 333344 3331 45799999999876321
Q ss_pred cccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 421 PFYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 421 ~~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
+..+++++.||++.. ..++.+++++++-+.+++...
T Consensus 245 --------~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~lE~~Ir 280 (295)
T PF03279_consen 245 --------GSHYRIEIEPPLDFP----SSEDIEELTQRYNDRLEEWIR 280 (295)
T ss_pred --------CCEEEEEEeecccCC----ccchHHHHHHHHHHHHHHHHH
Confidence 112788889998776 244677777777777766644
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.00067 Score=66.91 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=43.2
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.++...++ .+|+|||.||++||+.|++++++. ..+++++.|.
T Consensus 187 ~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 187 GGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 566899999988765554 469999999999999999999995 6778888764
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.00068 Score=67.01 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=43.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.++...++ .+|+|||.||++||+.|++++++. ..+++++.|.
T Consensus 193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 249 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ 249 (270)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence 566899999988765554 469999999999999999999995 5778988777
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0024 Score=56.76 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=68.0
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCe---
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPE--- 188 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~--- 188 (504)
.++.+++.|.++ |+||=...+|+.=++. ||+++++= | -.+|..+.++...+.+++
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q-----------G---------~~dK~~a~~~L~~~~~l~~e~ 101 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ-----------G---------ISDKLAAFEELLKKLNLDPEE 101 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee-----------c---------hHhHHHHHHHHHHHhCCCHHH
Confidence 345566789777 7999999999999999 99986431 1 135888888877665543
Q ss_pred -EEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 189 -IGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 189 -~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.+.||-.+|+|+|+.|+.++++.. .+.++..|.
T Consensus 102 ~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~ 136 (170)
T COG1778 102 VAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRAD 136 (170)
T ss_pred hhhhcCccccHHHHHHcCCcccccccCHHHHHhhH
Confidence 257999999999999999999975 666776665
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0034 Score=61.90 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=41.0
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++..+...++ .+++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad 252 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARAD 252 (272)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCC
Confidence 456788888887665554 46999999999999999999988 55667776555
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.029 Score=53.58 Aligned_cols=92 Identities=23% Similarity=0.236 Sum_probs=50.7
Q ss_pred ccCHHHHHHHhhCC--CEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 108 DLHPESWRVFSSCG--KRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 108 ~~~~~~~~~~~~~G--~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
..++++++.+++.+ .++ ++|-+.....+...++ +|+ |.++.++-. | ...|+. +=-+.+.+
T Consensus 99 ~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~-------g-~~KP~~----~~f~~~~~ 165 (229)
T COG1011 99 PDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDV-------G-VAKPDP----EIFEYALE 165 (229)
T ss_pred ccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEeccc-------c-cCCCCc----HHHHHHHH
Confidence 36688888665433 345 6899888888999898 885 555555521 1 111111 00112233
Q ss_pred HhCCC-CCeEEEeCCC-CCHHHHhhccc-CeeeCC
Q 043920 181 AFGET-QPEIGLGDRQ-TDIPFMALCKE-GYLVPS 212 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~-~DlpmL~~a~~-~~~Vnp 212 (504)
.+|.. .-.+.+|||. +|+.--+.+|- .+.+|.
T Consensus 166 ~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~ 200 (229)
T COG1011 166 KLGVPPEEALFVGDSLENDILGARALGMKTVWINR 200 (229)
T ss_pred HcCCCcceEEEECCChhhhhHHHHhcCcEEEEECC
Confidence 34432 2256899995 66444444443 335554
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.00093 Score=65.88 Aligned_cols=52 Identities=23% Similarity=0.254 Sum_probs=42.5
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|..+|+......++ .+|+|||.||++||+.|+++|++. .+++++.+|.
T Consensus 186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 677898888877664444 469999999999999999999985 5677887776
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.011 Score=67.00 Aligned_cols=88 Identities=20% Similarity=0.272 Sum_probs=68.0
Q ss_pred hcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH
Q 043920 106 ASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA 181 (504)
Q Consensus 106 ~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~ 181 (504)
.+.++|++.+ .+++.|..+ ++||.....++.++++ +|++. .+ ++ ..++|.+.++++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~-~~-----------------~~-~p~~K~~~v~~l 625 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDF-RA-----------------GL-LPEDKVKAVTEL 625 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCe-ec-----------------CC-CHHHHHHHHHHH
Confidence 3456776654 788899776 5899999999999999 99972 11 12 456899999987
Q ss_pred hCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCc
Q 043920 182 FGETQPEIGLGDRQTDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 182 ~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 214 (504)
-. .+.....||+.||.|+|+.|+-.+++....
T Consensus 626 ~~-~~~v~mvGDgiNDapAl~~A~vgia~g~~~ 657 (741)
T PRK11033 626 NQ-HAPLAMVGDGINDAPAMKAASIGIAMGSGT 657 (741)
T ss_pred hc-CCCEEEEECCHHhHHHHHhCCeeEEecCCC
Confidence 53 344557899999999999999999887433
|
|
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.021 Score=57.21 Aligned_cols=156 Identities=10% Similarity=0.147 Sum_probs=92.3
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHh-hCCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVA-LGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
+++++|.|.+... +++++|+++-|...+|....... ...++..+.+. .+.+-.++.. .|.-.++. +...
T Consensus 99 ~v~~~g~e~l~~~---~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~-~~~~ 174 (290)
T PRK06628 99 RIEIIGIENIKKL---EGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKANNPYVNKLVNESRAGDKLRLIPK-GPEG 174 (290)
T ss_pred eEEEeCHHHHHHh---cCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecCCCHHHHHHHHHHHHhcCCceecC-CCch
Confidence 6788998876421 46799999999999998764333 33356666665 4555555432 34334431 2235
Q ss_pred HHHHHHHhhcC-CEEEEcCceeeCCCcccccc-------ccc----cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFS-------ALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk-------~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
+..+.+.|++| .+.+.|.=.. +++...+|- +|. .+.++||+|+.+....
T Consensus 175 ~r~l~k~Lk~g~~v~il~Dq~~-~~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~~------------------ 235 (290)
T PRK06628 175 SRALVRAIKESESIVMLVDQKM-NDGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRTK------------------ 235 (290)
T ss_pred HHHHHHHHHcCCeEEEEecccC-CCCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEECC------------------
Confidence 77888889999 7888865442 223333442 231 3568999999886521
Q ss_pred ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHH
Q 043920 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAAT 466 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~ 466 (504)
.+ .+++++.||++.....+..++..+.++.+-+.+.+.
T Consensus 236 ----~~-~~~i~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~ 273 (290)
T PRK06628 236 ----GS-YFKVIVHPQLKFEQTGDNKADCYNIMLNINQMLGEW 273 (290)
T ss_pred ----CC-eEEEEEcCCCCCCCCCChhhhHHHHHHHHHHHHHHH
Confidence 01 267888888865422112233334444444444443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.004 Score=59.57 Aligned_cols=86 Identities=21% Similarity=0.158 Sum_probs=56.2
Q ss_pred EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHH
Q 043920 125 VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPF 200 (504)
Q Consensus 125 vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~Dlpm 200 (504)
+.+......++.+.+. ++.+.... .+...-.+.. .|..|...++......++ .+++|||.||++|
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m 180 (225)
T TIGR01482 112 MRYGIDVDTVREIIKE-LGLNLVAV------DSGFDIHILP----QGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDL 180 (225)
T ss_pred EeecCCHHHHHHHHHh-cCceEEEe------cCCcEEEEee----CCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHH
Confidence 3333344456677777 77542111 1112233432 455788888876654443 4699999999999
Q ss_pred HhhcccCeeeC-CCcchhcccc
Q 043920 201 MALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 201 L~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
|+.+++++++. ..+++++.|.
T Consensus 181 ~~~ag~~vam~Na~~~~k~~A~ 202 (225)
T TIGR01482 181 FEVPGFGVAVANAQPELKEWAD 202 (225)
T ss_pred HHhcCceEEcCChhHHHHHhcC
Confidence 99999999985 6778888776
|
catalyze the same reaction as SPP. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.022 Score=53.97 Aligned_cols=87 Identities=21% Similarity=0.189 Sum_probs=44.4
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHH--HHHHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIM--VEAFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADAL 178 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~--v~~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l 178 (504)
++|++.+ .++++|..+ |+|.+.... ....... ++ +|.++++.-. | . ..|+. +-.+.+
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~---~----~-~KP~p----~~~~~~ 161 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLE---G----L-RKPDP----RIYQLM 161 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeec---C----C-CCCCH----HHHHHH
Confidence 5666654 677889776 688875432 2211222 23 4666654421 0 0 01111 111222
Q ss_pred HHHhCCCC-CeEEEeCCCCCHHHHhhcccCe
Q 043920 179 LKAFGETQ-PEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 179 ~~~~~~~~-~~~aygDS~~DlpmL~~a~~~~ 208 (504)
.+.++... -.+.+||+..|+..-+.+|-..
T Consensus 162 ~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 162 LERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22333221 1457899999999888887643
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.018 Score=58.23 Aligned_cols=159 Identities=11% Similarity=0.088 Sum_probs=95.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh-CCCccEEEec--ccchhhhhcc----CceeEeecCChh
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRAT 354 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~ 354 (504)
-+++++|.|.+... ...++|+|+++-|.+.+|........ +.++..+.+. .+.+..++.. .|.-.+.. +..
T Consensus 115 ~~~~~~g~e~l~~a-~a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~-~~~ 192 (308)
T PRK06553 115 GRVEVRGIEIFERL-RDDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPPNNPYAARKVLEARRTTMGGLVPS-GAG 192 (308)
T ss_pred CeeEecCHHHHHHH-HhcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHHHHcCCCcccC-CCh
Confidence 36788898865411 01467999999999999998755433 3467777765 4555555432 33333322 223
Q ss_pred hHHHHHHHhhcC-CEEEEcCceeeCCCcccccc-------ccc----cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 355 DASTIKKLLEEG-DLAMCPEGTTCREPFLLRFS-------ALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 355 ~~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk-------~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
.+..+.+.|++| .+.+.|--.-+ ++...+|- +|. .+.++||+|+.+....
T Consensus 193 ~~r~l~r~Lk~g~~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R~~----------------- 254 (308)
T PRK06553 193 AAFALAGVLERGGHVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIRLP----------------- 254 (308)
T ss_pred HHHHHHHHHHcCCeEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEEcC-----------------
Confidence 577888889999 88888654432 23333442 231 3568999999886421
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHH
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAAT 466 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~ 466 (504)
.+. +++++.||++.....+..++.++.++++-+.+.+.
T Consensus 255 -----~g~-y~i~~~~~~~~~~~~~~~~d~~~~t~~~n~~lE~~ 292 (308)
T PRK06553 255 -----GGR-FRLELTERVELPRDADGQIDVQATMQALTDVVEGW 292 (308)
T ss_pred -----CCe-EEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHH
Confidence 122 78889999876421111234555555555555554
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0037 Score=59.64 Aligned_cols=83 Identities=18% Similarity=0.131 Sum_probs=55.4
Q ss_pred EecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHH
Q 043920 126 LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFM 201 (504)
Q Consensus 126 vSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL 201 (504)
+++.....++.+.+. .|+..+.+ +.. -.+.. .|..|...++..+...++ .+++|||.||++||
T Consensus 113 ~~~~~~~~~~~~l~~-~~~~~~~~-------~~~-~ei~~----~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 113 REGKDVDEVREIIKE-RGLNLVDS-------GFA-IHIMK----KGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF 179 (215)
T ss_pred cCCccHHHHHHHHHh-CCeEEEec-------Cce-EEEec----CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 455555566666666 66543211 111 12221 456788888777554443 46899999999999
Q ss_pred hhcccCeeeC-CCcchhcccc
Q 043920 202 ALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 202 ~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
+.++..+++. ..++++++|.
T Consensus 180 ~~ag~~vam~na~~~~k~~A~ 200 (215)
T TIGR01487 180 RVVGFKVAVANADDQLKEIAD 200 (215)
T ss_pred HhCCCeEEcCCccHHHHHhCC
Confidence 9999999984 6788888876
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.001 Score=65.86 Aligned_cols=52 Identities=21% Similarity=0.302 Sum_probs=43.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.++...++ .+|+|||.||++||+.|++++++. ..+++++.|.
T Consensus 185 ~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~ 241 (272)
T PRK15126 185 VGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELP 241 (272)
T ss_pred CCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCC
Confidence 566899999988766555 459999999999999999999995 5778888776
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.005 Score=56.49 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=24.3
Q ss_pred HHHHHHhhCCCEE-EEecCcHH------------HHHHHHHhhcCCc
Q 043920 112 ESWRVFSSCGKRC-VLTANPRI------------MVEAFLKDFLAAD 145 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~------------~v~~ia~~~Lg~d 145 (504)
++++.++++|..+ |+|..+.. .++.+++. +|++
T Consensus 49 e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~ 94 (166)
T TIGR01664 49 AKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVP 94 (166)
T ss_pred HHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCC
Confidence 4556778899876 68877653 57788888 8875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.024 Score=56.97 Aligned_cols=167 Identities=13% Similarity=0.119 Sum_probs=104.3
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHh--hCCCccEEEec--ccchhhhhcc----CceeEeecCChh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVA--LGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRAT 354 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~--~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~ 354 (504)
+++++|.+++... +++|+|+++=|.+.+|....... ...++..+.+. .+.+-.++.. .|.-.+.+ ..
T Consensus 94 ~~~~~g~~~~~~~---~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~--~~ 168 (293)
T PRK06946 94 LVQVDSAIDLTDP---DGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTPMSNPLLDAIAKAARGRFGAEMVSR--AD 168 (293)
T ss_pred eEEEECHHHHHhc---CCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeCCCCHHHHHHHHHHHHhcCCCccCC--Cc
Confidence 5788888776421 57899999999999999875432 23466667665 4555555432 34444432 23
Q ss_pred hHHHHHHHhhcC-CEEEEcCceee-CCCcccccc-------ccc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 355 DASTIKKLLEEG-DLAMCPEGTTC-REPFLLRFS-------ALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 355 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
.++.+.+.|++| .+.+-|.=..+ +++...+|- +|. .+.++||+|+.+....
T Consensus 169 ~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~~---------------- 232 (293)
T PRK06946 169 SARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVLP---------------- 232 (293)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEeC----------------
Confidence 477788889999 77787765433 334444552 221 3568999999765421
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKY 480 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~ 480 (504)
.+..+++++.||++.. +.++.++.++.+-+.+++.....-.++-+..|+
T Consensus 233 ------~~~~~~~~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir~~PeQw~W~HrR 281 (293)
T PRK06946 233 ------DYKGYRLRVFKPWENY----PTGDDDLDARRMNAFLEEQIRLMPEQYYWVHKR 281 (293)
T ss_pred ------CCCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcHhHHhHHhh
Confidence 0112678888888764 355666777777777777655444444444443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.057 Score=52.40 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=19.9
Q ss_pred eEEEeCC-CCCHHHHhhcccC-eeeCCC
Q 043920 188 EIGLGDR-QTDIPFMALCKEG-YLVPSK 213 (504)
Q Consensus 188 ~~aygDS-~~DlpmL~~a~~~-~~Vnp~ 213 (504)
.+.+||| ..|+.--+.+|-. +.|++.
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 5689999 5999999888854 456654
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.021 Score=66.07 Aligned_cols=119 Identities=15% Similarity=0.222 Sum_probs=77.5
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc---EEEeeeEEE-eCCeeee-----eEeCCCCCCchhHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD---LVLGTEIAT-YKGRATG-----LVRDPGVLVGNKKA 175 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d---~vigt~l~~-~~g~~tG-----~i~g~~~l~g~~Kv 175 (504)
.+|++ ++.+++.|.++ ++||-...-++.+|++ +|++ -+-|.+++. ++..+.- .+-.. + .-++|.
T Consensus 551 ~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr-~-sPe~K~ 627 (902)
T PRK10517 551 PKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFAR-L-TPMHKE 627 (902)
T ss_pred chhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEE-c-CHHHHH
Confidence 45544 55788999776 4899999999999999 9995 222333321 0100000 11111 2 567899
Q ss_pred HHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 176 DALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 176 ~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
+.++.+-.........||+.||.|-|+.|+-.++++..-...+-|. .|+..|..+
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA-----DiVLldd~~ 682 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA-----DIILLEKSL 682 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC-----CEEEecCCh
Confidence 9999876543334468999999999999999999984334444444 466555555
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.019 Score=67.37 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=68.9
Q ss_pred ccCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc--EEEeeeEEE-eCCeeeee------------------
Q 043920 108 DLHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD--LVLGTEIAT-YKGRATGL------------------ 162 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d--~vigt~l~~-~~g~~tG~------------------ 162 (504)
.+++++ ++.+++.|.+++ +||-...-+..+|++ +|+. ..+.+.-+. ++..+||.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 345444 558889997775 899999999999999 9983 222111110 01233432
Q ss_pred EeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 163 VRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 163 i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
+-. .+ ..++|.+.++.+-.......+.||+.||.|+|+.|+-.++++
T Consensus 725 V~a-r~-sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 725 VIA-RC-APQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred EEE-ec-CHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecC
Confidence 111 12 557899988887554344557999999999999999999986
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.036 Score=64.63 Aligned_cols=120 Identities=19% Similarity=0.140 Sum_probs=76.1
Q ss_pred ccCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc----EE-EeeeEEEe-CCeee-----eeEeCCCCCCch
Q 043920 108 DLHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD----LV-LGTEIATY-KGRAT-----GLVRDPGVLVGN 172 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d----~v-igt~l~~~-~g~~t-----G~i~g~~~l~g~ 172 (504)
.+++++ ++.+++.|.+++ +||-...-++.+|++ +|+. .+ -|.+++.- +..+. -.+-.. + .-+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar-~-sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLAR-S-SPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEE-C-CHH
Confidence 345544 557889997764 899999999999999 9984 11 12222100 00000 011111 3 567
Q ss_pred hHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC-CCcchhccccccCCCceeeeCCCc
Q 043920 173 KKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
+|.+.++.+-.........||+.||.|+|+.|+-.++++ ......+-|. .++..|..+
T Consensus 656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aA-----DivL~dd~f 714 (941)
T TIGR01517 656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEAS-----DIILLDDNF 714 (941)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhC-----CEEEecCCH
Confidence 999999987554334557999999999999999999997 3333443333 355544444
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=68.61 Aligned_cols=105 Identities=20% Similarity=0.206 Sum_probs=66.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE----E-----EeeeEEEeCC------eeeeeEeCCCCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL----V-----LGTEIATYKG------RATGLVRDPGVL 169 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~----v-----igt~l~~~~g------~~tG~i~g~~~l 169 (504)
+++++ ++.+|+.|.++ ++||-....+..+|++ +|+.. + -|.+++.-+. ...-.+-.. +
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar-~- 614 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR-V- 614 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe-c-
Confidence 45544 55788999776 5899999999999999 99841 1 0111100000 000011111 2
Q ss_pred CchhHHHHHHHHhCCCCCeE-EEeCCCCCHHHHhhcccCeeeCCCcchh
Q 043920 170 VGNKKADALLKAFGETQPEI-GLGDRQTDIPFMALCKEGYLVPSKPEVK 217 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~-aygDS~~DlpmL~~a~~~~~Vnp~~~l~ 217 (504)
.-++|.+.++.+- +.+..+ +.||+.||.|||+.|+-.++++......
T Consensus 615 ~P~~K~~iV~~lq-~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~a 662 (917)
T TIGR01116 615 EPSHKSELVELLQ-EQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVA 662 (917)
T ss_pred CHHHHHHHHHHHH-hcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHH
Confidence 4568888887653 334344 5999999999999999999997443343
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.019 Score=66.45 Aligned_cols=120 Identities=19% Similarity=0.197 Sum_probs=77.6
Q ss_pred ccCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc--E-EEeeeEEE-eCCeeee-----eEeCCCCCCchhH
Q 043920 108 DLHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD--L-VLGTEIAT-YKGRATG-----LVRDPGVLVGNKK 174 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d--~-vigt~l~~-~~g~~tG-----~i~g~~~l~g~~K 174 (504)
.++|++ ++.+++.|.+++ +||-...-++.+|++ +|++ . +-|.+++. .+..+.. .+-.. + .-++|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr-~-sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFAK-L-TPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEE-e-CHHHH
Confidence 345555 557889997764 899999999999999 9995 1 22333321 0100000 01111 2 55789
Q ss_pred HHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 175 ADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 175 v~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
.+.++.+-.........||+.||.|.|+.|+-.++++..-...+-|. .|+..|..+
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaA-----DiVLldd~f 682 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESA-----DIILLEKSL 682 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhc-----CEEEecCCh
Confidence 99999886543334468999999999999999999984334444333 366555544
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.02 Score=55.00 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=54.2
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-CCeEE
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET-QPEIG 190 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~~~~a 190 (504)
.+++++++|..+ ++|+|++..++.+.+. +|+.+....-+.-+ ....| .|++ +-=..+.++ +|.. .-++.
T Consensus 94 ~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~-dv~~~---KP~P---d~yL~Aa~~-Lgv~P~~Cvv 164 (221)
T COG0637 94 LLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTAD-DVARG---KPAP---DIYLLAAER-LGVDPEECVV 164 (221)
T ss_pred HHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHH-HHhcC---CCCC---HHHHHHHHH-cCCChHHeEE
Confidence 345788888554 5899999999999988 88643332221110 00111 1211 111222222 3322 12678
Q ss_pred EeCCCCCHHHHhhcccCeeeCCC
Q 043920 191 LGDRQTDIPFMALCKEGYLVPSK 213 (504)
Q Consensus 191 ygDS~~DlpmL~~a~~~~~Vnp~ 213 (504)
+-||.+.+.--+.||-.++.-+.
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EecchhHHHHHHHCCCEEEEecC
Confidence 99999999999999887766554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.022 Score=56.20 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=42.7
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHH---HHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCe
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVE---AFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPE 188 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~---~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~ 188 (504)
.++.++++|..+ +||+..+...+ ...+. +|++.+.-..+-.+++ +..|..+.+.....+++.
T Consensus 126 ~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~-------------~~~K~~rr~~I~~~y~Iv 191 (266)
T TIGR01533 126 FLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKD-------------KSSKESRRQKVQKDYEIV 191 (266)
T ss_pred HHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCC-------------CCCcHHHHHHHHhcCCEE
Confidence 344667889766 58997754444 55566 7875321111111110 123555666554556777
Q ss_pred EEEeCCCCCHH
Q 043920 189 IGLGDRQTDIP 199 (504)
Q Consensus 189 ~aygDS~~Dlp 199 (504)
+.+||+.+|+.
T Consensus 192 l~vGD~~~Df~ 202 (266)
T TIGR01533 192 LLFGDNLLDFD 202 (266)
T ss_pred EEECCCHHHhh
Confidence 78999999984
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0025 Score=61.26 Aligned_cols=52 Identities=21% Similarity=0.238 Sum_probs=42.0
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++......++ .+++|||.||++||+.++.++++ |..+++++.|.
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~ 210 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAAD 210 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcc
Confidence 455688888877655444 46999999999999999999999 56778887776
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0029 Score=69.17 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=44.0
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.++...++ .+|+|||.||++||+.|+++|++. ..+++++.|.
T Consensus 504 ~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad 560 (580)
T PLN02887 504 PGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVAD 560 (580)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCC
Confidence 566899999888766665 459999999999999999999995 6788998877
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0039 Score=56.45 Aligned_cols=84 Identities=13% Similarity=0.096 Sum_probs=50.0
Q ss_pred ccCHHHHHHHhhCCCEEE-EecCcHH----HHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 108 DLHPESWRVFSSCGKRCV-LTANPRI----MVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 108 ~~~~~~~~~~~~~G~~vv-vSas~~~----~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
.+..+.+..|+++|+.|+ |||-..- ..+-+++. +.++..... .++|.=..+ ..-.|..+|++
T Consensus 117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~pv-------~f~Gdk~k~---~qy~Kt~~i~~-- 183 (237)
T COG3700 117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNPV-------IFAGDKPKP---GQYTKTQWIQD-- 183 (237)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhh-cccCCCcce-------eeccCCCCc---ccccccHHHHh--
Confidence 344566778999998886 8875433 33344444 444332221 233322211 23357776554
Q ss_pred CCCCCeEEEeCCCCCHHHHhhccc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKE 206 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~ 206 (504)
+++.+.||||.+|+---+-||-
T Consensus 184 --~~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 184 --KNIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred --cCceEEecCCchhhhHHHhcCc
Confidence 5677899999999887776654
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.021 Score=64.85 Aligned_cols=118 Identities=13% Similarity=0.101 Sum_probs=76.6
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EE-eeeEEEeCCee----ee----------eEeCCC
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VL-GTEIATYKGRA----TG----------LVRDPG 167 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vi-gt~l~~~~g~~----tG----------~i~g~~ 167 (504)
..+|++ ++.+++.|.++ ++||-...-++.+|++ +|++. ++ +.++. +|.. +. .+-. .
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~vfA-r 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLL--KGDNRDDLPSGELGEMVEDADGFA-E 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhc--CCcchhhCCHHHHHHHHHhCCEEE-e
Confidence 455555 55788999776 4899999999999999 99953 22 11211 1100 00 0111 1
Q ss_pred CCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCceeeeCCCc
Q 043920 168 VLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 168 ~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~f~~~r~ 235 (504)
+ .-++|.+.++++-.+.......||+.||.|-|+.|+-.++++..-...+-|. .|+..|..+
T Consensus 518 ~-~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaA-----DivLl~d~l 579 (755)
T TIGR01647 518 V-FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAA-----DIVLTEPGL 579 (755)
T ss_pred c-CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhC-----CEEEEcCCh
Confidence 2 5688999999875443334468999999999999999999985334443333 366554444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.047 Score=55.24 Aligned_cols=170 Identities=15% Similarity=0.130 Sum_probs=105.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
-+++++|.|.+... ...++|+|+++-|...+|....+.....++..+.+. .+.+-.++.. .|...++++ .
T Consensus 108 ~~v~i~g~e~l~~a-~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 183 (309)
T PRK06860 108 RWTEVEGLEHIREV-QAQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRPNDNPLYDWLQTWGRLRSNKSMLDRK---D 183 (309)
T ss_pred CeEEEeCHHHHHHH-HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHHhhcCCcCcCcc---c
Confidence 36788998875311 015789999999999999976544433466666665 3444444322 343344332 3
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCccccc--------cccc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLLRF--------SALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
+..+.+.|++| .+.+-|--.-. .++...+| .+|. ...++||+|+.+....
T Consensus 184 ~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R~~---------------- 247 (309)
T PRK06860 184 LKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRRKP---------------- 247 (309)
T ss_pred HHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEEeC----------------
Confidence 67788899999 77777654432 22333344 2231 3568999999986521
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYR 481 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~ 481 (504)
.+..+++++.+|++.. .+++.++.++.+.+.+.+.....-.++-+-.|+.
T Consensus 248 ------~~~~~~i~~~~~~~~~----~~~d~~~~t~~~n~~lE~~Ir~~PeQw~W~hkRw 297 (309)
T PRK06860 248 ------DGKGYELIILPPEDSP----PLDDAEATAAWMNKVVEKCILMAPEQYMWLHRRF 297 (309)
T ss_pred ------CCCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCchHHHHHHHhc
Confidence 1212788888888754 2567778888887777777655444544444433
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0036 Score=62.08 Aligned_cols=42 Identities=24% Similarity=0.327 Sum_probs=34.5
Q ss_pred CchhHHHHHHHHhCCCCC-------eEEEeCCCCCHHHHhhcccCeeeC
Q 043920 170 VGNKKADALLKAFGETQP-------EIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~-------~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
.|..|...|+.++...++ .+|+|||.||++||+.|+.+++++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 566788888877554333 469999999999999999999997
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.015 Score=52.49 Aligned_cols=46 Identities=24% Similarity=0.231 Sum_probs=34.1
Q ss_pred hhHHHHHHHHhCC-----CCCeEEEeCCCCCHHHHhhcccC----eeeCCCcchh
Q 043920 172 NKKADALLKAFGE-----TQPEIGLGDRQTDIPFMALCKEG----YLVPSKPEVK 217 (504)
Q Consensus 172 ~~Kv~~l~~~~~~-----~~~~~aygDS~~DlpmL~~a~~~----~~Vnp~~~l~ 217 (504)
+-|...|+..... ..+..|||+..+|..--+.+|-| +.|||..++.
T Consensus 101 ~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~ 155 (157)
T PF08235_consen 101 EFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVK 155 (157)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEe
Confidence 4588888876432 23445899999999999988866 5778877654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0023 Score=61.57 Aligned_cols=52 Identities=23% Similarity=0.279 Sum_probs=40.4
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.+..|...++..+...++ .+++|||.||++||+.+++++++.. .+.++++|.
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 445688888776543332 4689999999999999999999975 677998887
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.027 Score=48.63 Aligned_cols=82 Identities=10% Similarity=0.043 Sum_probs=59.9
Q ss_pred HHHHHHhhCCCEEEEecCcHHHHHHHHHhhcCCc--EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeE
Q 043920 112 ESWRVFSSCGKRCVLTANPRIMVEAFLKDFLAAD--LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPEI 189 (504)
Q Consensus 112 ~~~~~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~ 189 (504)
+.++++.+.=+.+|.||--.-.+..+|+. .|++ ++.+ + . ..+.|.+.++++-+.....+
T Consensus 37 e~iqeL~d~V~i~IASgDr~gsl~~lae~-~gi~~~rv~a---------------~--a-~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 37 ETIQELHDMVDIYIASGDRKGSLVQLAEF-VGIPVERVFA---------------G--A-DPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred HHHHHHHHhheEEEecCCcchHHHHHHHH-cCCceeeeec---------------c--c-CHHHHHHHHHHhcCCCcEEE
Confidence 34445555523345788888889999998 8874 2221 1 1 45779999999866656678
Q ss_pred EEeCCCCCHHHHhhcccCeeeCC
Q 043920 190 GLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 190 aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
+.||..||.++|+.|+-.+++=.
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq 120 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQ 120 (152)
T ss_pred EecCCcchHHHhhhcccceEEec
Confidence 99999999999999999987643
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.004 Score=61.08 Aligned_cols=52 Identities=25% Similarity=0.268 Sum_probs=42.6
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++.++...++ .+++|||.||++||+.++.++++ |+++.+++.|.
T Consensus 185 ~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~ 241 (256)
T TIGR00099 185 KGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALAD 241 (256)
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCC
Confidence 566799998888765544 46999999999999999999999 56777887666
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.075 Score=61.63 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=67.2
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-----EEeeeEEEeCC-eee-----eeEeCCCCCCch
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-----VLGTEIATYKG-RAT-----GLVRDPGVLVGN 172 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-----vigt~l~~~~g-~~t-----G~i~g~~~l~g~ 172 (504)
.++|++ ++.+++.|.++ ++||-...-++.+|++ +|++. +-|.+++.-++ .+. -.+-.. + .-+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar-~-~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR-A-SPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE-C-CHH
Confidence 345555 55788999776 5899999999999999 99852 11222210000 000 011111 2 557
Q ss_pred hHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 173 KKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
+|.+.++.+-.........||+.||.|+|+.|+-.++.+.
T Consensus 605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~ 644 (884)
T TIGR01522 605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQ 644 (884)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCC
Confidence 8988888865443334579999999999999999999863
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.12 Score=52.12 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=97.9
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHh-hCCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVA-LGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~-~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
+++++|.|.+... ...++|+|+++=|...+|....... ...++..+.+. .+.+-.++.. .|.-.+. ....
T Consensus 105 ~~~i~g~e~l~~~-~~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~--~~~~ 181 (305)
T TIGR02208 105 RVNLMGLEHIEAA-QAAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNHKNPLFDWLWNRVRSRFGGHVYA--REAG 181 (305)
T ss_pred ceEEeCHHHHHHH-HhCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCCCCHHHHHHHHHHHhcCCCceec--Chhh
Confidence 6788898765311 0147799999999999998765443 34577777765 4445444432 3333333 2245
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCcccccccc-c----------cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLLRFSAL-F----------AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~G-~----------~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
+..+.+.|++| .+.+-+-=..+ +++...+|-.- . .+.++||+|+.+.-..
T Consensus 182 ~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r~~----------------- 244 (305)
T TIGR02208 182 IKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGYNQ----------------- 244 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEEEC-----------------
Confidence 78888999999 77777665443 33444566332 1 4568999999875421
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcC
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLS 468 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~ 468 (504)
.+..++|++.+|++.. ...+.++.++++-+.+.+...
T Consensus 245 -----~~~~~~i~~~~~~~~~----~~~~~~~~t~~~n~~lE~~Ir 281 (305)
T TIGR02208 245 -----VTGKFELTVRPAMATE----LSVDPEQEARAMNKEVEQFIL 281 (305)
T ss_pred -----CCCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHH
Confidence 0112678888887653 245667777777666666544
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.12 Score=52.37 Aligned_cols=168 Identities=12% Similarity=0.103 Sum_probs=102.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhh-CCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
+++++|.|.+... ...++++|+++=|...++........ +.++..|.+. .+.+-.++.. .|.-.+. +...
T Consensus 114 ~~~~~g~e~l~~a-~~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~--~~~~ 190 (314)
T PRK08943 114 RVEWHGLEILEEA-RANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQRNPLFDWLWNRVRRRFGGRLHA--REDG 190 (314)
T ss_pred eEEEECHHHHHHH-HhCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCCCCHHHHHHHHHHHhhcCCeeec--Cchh
Confidence 6788898865311 01478999999999999987554333 4567777765 3444444422 3433343 2344
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCccccccc-------cc----cccCCeEEEEEEEccccCccccccCCCCCCccc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLLRFSA-------LF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPF 422 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~-------G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~ 422 (504)
+..+.+.|++| .+.+-|.-..+ +++...+|-. |. .+.++||+|+.+.-..
T Consensus 191 ~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R~~----------------- 253 (314)
T PRK08943 191 IKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVYNG----------------- 253 (314)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEEeC-----------------
Confidence 77888999999 78888765543 3344445532 21 3578999999984311
Q ss_pred cccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 423 YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 423 ~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
.+..++|++.+|++.. ...+..+.++++-+.+.+.....-.++=+..|
T Consensus 254 -----~~~~~~i~~~~~~~~~----~~~d~~~~t~~~~~~lE~~Ir~~PeQw~W~hr 301 (314)
T PRK08943 254 -----KTHRLDIEIRPPMDDL----LSADDETIARRMNEEVEQFVGPHPEQYMWILK 301 (314)
T ss_pred -----CCCeEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHHHHHHh
Confidence 0112778888888653 24566777777766666664433333333333
|
|
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.1 Score=52.77 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=94.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----Cc--eeEeecCChh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IK--AVRLSRDRAT 354 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g--~i~i~R~~~~ 354 (504)
+++++|.|++... ...++++|+++-|...+|..........++..+.+. .+.+-.++.. .| .+.+. ..
T Consensus 106 ~~~~~g~e~l~~a-~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~~ 181 (310)
T PRK05646 106 LAHIEGLEHLQQA-QQEGQGVILMALHFTTLEIGAALLGQQHTIDGMYREHKNPVFDFIQRRGRERHNLDSTAIE---RE 181 (310)
T ss_pred eEEEeCHHHHHHH-HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeCCCCHHHHHHHHHHhhccCCCccccc---Hh
Confidence 6788888875311 014689999999999999986544333455555554 3444444432 23 23222 23
Q ss_pred hHHHHHHHhhcC-CEEEEcCceee-CCCccccccc-------cc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 355 DASTIKKLLEEG-DLAMCPEGTTC-REPFLLRFSA-------LF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 355 ~~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~-------G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
.+..+.+.|++| .+.+-+-=..+ +++...+|-. |. .+.++||+|+.+....
T Consensus 182 ~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~~---------------- 245 (310)
T PRK05646 182 DVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRLA---------------- 245 (310)
T ss_pred hHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEeC----------------
Confidence 467777889998 77777654433 2233345532 21 3568999999986421
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYE 470 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~ 470 (504)
.+..++|++.||++.. ..++.++.++++-+.+.+....-
T Consensus 246 ------~g~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~lE~~Ir~~ 284 (310)
T PRK05646 246 ------DGSGYRLVIHPPLEDF----PGESEEADCLRINQWVERVVREC 284 (310)
T ss_pred ------CCCeEEEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHHcC
Confidence 1212678888888753 24555566666655555554433
|
|
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.1 Score=52.61 Aligned_cols=170 Identities=14% Similarity=0.116 Sum_probs=102.5
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
-+++++|.|.+... ...++++|+++=|...++..........++..+.+. .+.+-.++.. .|.-.++++ .
T Consensus 102 ~~v~i~g~e~l~~a-~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~l~~~~R~~~g~~~i~~~---~ 177 (303)
T TIGR02207 102 KWMQIEGLEHLQRA-QKQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRPHNNPLFDWIQTRGRLRSNKAMIDRK---D 177 (303)
T ss_pred CcEEEECHHHHHHH-HhcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHHhcCCcccCcc---c
Confidence 46788898875311 014689999999999999986544333455556553 3444444321 233334322 3
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCccccc--------cccc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLLRF--------SALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
+..+.+.|++| .+.|-+.-.-+ .++...+| -.|. .+.++||+|+.+....
T Consensus 178 ~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~~---------------- 241 (303)
T TIGR02207 178 LRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRNE---------------- 241 (303)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEeC----------------
Confidence 67788899999 77777653322 22323333 3341 4568999999986521
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHH
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYR 481 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~ 481 (504)
.+..++|++.||++.. .+++..+.++++-+.+++....--.++-+..|++
T Consensus 242 ------~~~~~~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P~QW~W~h~Rw 291 (303)
T TIGR02207 242 ------DGSGYRLKIDPPLDDF----PGDDEIAAAARMNKIVEKMIMRAPEQYMWLHRRF 291 (303)
T ss_pred ------CCCeEEEEEeCCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHHHHHHHhc
Confidence 1112788888888653 2566677777777777776554445544444433
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.033 Score=60.16 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=35.9
Q ss_pred hccCceeEeecCChhh----HHHHHHHhhcC-CEEEEcCceeeCCCccccccccccccCCeEEEEEEE
Q 043920 340 ISPIKAVRLSRDRATD----ASTIKKLLEEG-DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMV 402 (504)
Q Consensus 340 ~~~~g~i~i~R~~~~~----~~~~~~~l~~G-~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~ 402 (504)
+...|.+.|+++.-.. ++.+++.|++| +++| +.|-.....-.+|..-+.+.++|+.=+.+.
T Consensus 390 ~~~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~~~~R~~~i~lAk~~gv~v~~i~~~ 455 (526)
T TIGR01663 390 FQPAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPDAASRAKFLQCARAAGIPCRCFLFN 455 (526)
T ss_pred HHHcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCCHHHHHHHHHHHHHcCCeEEEEEeC
Confidence 3345677777654333 45677788999 8777 544444434455554455667777644443
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.12 Score=60.66 Aligned_cols=101 Identities=15% Similarity=0.064 Sum_probs=64.9
Q ss_pred cCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc-E-E---------EeeeEEE---eC---Ceeeee-----
Q 043920 109 LHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD-L-V---------LGTEIAT---YK---GRATGL----- 162 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d-~-v---------igt~l~~---~~---g~~tG~----- 162 (504)
+++++ ++.++++|..++ +||-...-+..++++ +|+- . - +....+. .+ -.+||.
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 34444 557889997764 899999999999999 9971 1 0 0000000 00 022221
Q ss_pred ---------------EeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 163 ---------------VRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 163 ---------------i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
+-.. + .-++|.+.++.+-.......+.||+.||.|+|+.|+-.++++-
T Consensus 648 ~~~el~~~~~~~~~~VfaR-~-sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~ 710 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFAR-T-SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI 710 (997)
T ss_pred CHHHHHHHHHhcCCEEEEE-C-CHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCC
Confidence 1110 1 3468888888765433344579999999999999999999863
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.021 Score=59.86 Aligned_cols=112 Identities=15% Similarity=0.173 Sum_probs=86.4
Q ss_pred hcCCCHHHHHHHHHHHcch-----------------hhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcC
Q 043920 85 FVGLRVTDIESVARAVLPK-----------------FYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLA 143 (504)
Q Consensus 85 ~~G~~~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg 143 (504)
-.|.-.+++++.+++.... ++.+.+.|...| ++|+-|.+. .+||-...-+..++.+ -|
T Consensus 407 ~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AG 485 (681)
T COG2216 407 RGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AG 485 (681)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hC
Confidence 4477788888888876532 122334454444 788999655 5999999999999999 99
Q ss_pred CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcc
Q 043920 144 ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPE 215 (504)
Q Consensus 144 ~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~ 215 (504)
+|+.++ +| .-|.|.+.+++..++......-||+.||.|-|..|+-.++.|..-+
T Consensus 486 VDdfiA-----------------ea-tPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTq 539 (681)
T COG2216 486 VDDFIA-----------------EA-TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQ 539 (681)
T ss_pred chhhhh-----------------cC-ChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccH
Confidence 998777 15 6789999999987665555468999999999999999999997543
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.0073 Score=58.48 Aligned_cols=52 Identities=19% Similarity=0.105 Sum_probs=41.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++.+....++ .+++|||.||++||+.+++++++ |..+++++.|.
T Consensus 156 ~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 156 LRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 455788888776554443 46899999999999999999999 46788888877
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.11 Score=52.08 Aligned_cols=167 Identities=12% Similarity=0.135 Sum_probs=98.1
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----Cce-eEeecCChhh
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKA-VRLSRDRATD 355 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~-i~i~R~~~~~ 355 (504)
+++++|.|++... ...++++|+++=|...+|..........+...+.+. .+.+-.++.. .|. ..++ ....
T Consensus 89 ~~~~~~~e~l~~~-~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~~~~~~R~~~g~~~i~~--~~~~ 165 (289)
T PRK08706 89 LVRYRNKHYLDDA-LAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLIG--RTEG 165 (289)
T ss_pred ceEEECHHHHHHH-HhCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeCCCCHHHHHHHHHHHhccCCccccc--Chhh
Confidence 4778898865311 014789999999999999987544433466666654 3444443322 232 2223 2235
Q ss_pred HHHHHHHh-hcC-CEEEEcCceee-CCCcccccc-------ccc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 356 ASTIKKLL-EEG-DLAMCPEGTTC-REPFLLRFS-------ALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 356 ~~~~~~~l-~~G-~l~IFPEGTrs-~~~~l~~Fk-------~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
+..+.+.| ++| .+++.+.=.-. +++...+|- +|. .+.++||+|+.+.-..
T Consensus 166 ~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~~---------------- 229 (289)
T PRK08706 166 LRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVREA---------------- 229 (289)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEcC----------------
Confidence 77788888 466 56666543322 233334553 231 4578999999886531
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
.+. +++++.+|++.. .+++.++.++++-+.+++....--.++=+-.+
T Consensus 230 ------~~~-~~i~i~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~P~QW~W~h~ 276 (289)
T PRK08706 230 ------DNT-VTLHFYPAWDSF----PSEDAQADAQRMNRFIEERVREHPEQYFWLHK 276 (289)
T ss_pred ------CCc-EEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 122 678888887653 25666777777777776664433333333333
|
|
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.042 Score=55.14 Aligned_cols=70 Identities=21% Similarity=0.327 Sum_probs=49.5
Q ss_pred ccchhhhhccCceeEeecCChhhHHHHHHHhhc---C-CEEEEcCceee-----CCC--ccccccccc----cccCCeEE
Q 043920 333 VSRLSEIISPIKAVRLSRDRATDASTIKKLLEE---G-DLAMCPEGTTC-----REP--FLLRFSALF----AELTDELV 397 (504)
Q Consensus 333 ~~~~~~~~~~~g~i~i~R~~~~~~~~~~~~l~~---G-~l~IFPEGTrs-----~~~--~l~~Fk~G~----~~~~~pIv 397 (504)
+|.++.++.++|.+.++|++-. ..|++ | +++|.|-|..- .+. -.++=++|| .+.|+|||
T Consensus 110 ~P~~R~~~~~~G~~~~sr~s~~------~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LV 183 (297)
T PF03982_consen 110 IPFFRDFLLWLGAVSASRESIR------YLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLV 183 (297)
T ss_pred ccccchhhhhcccccccccccc------eeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEE
Confidence 6778888888899988876632 23443 5 69999988764 222 235557887 56799999
Q ss_pred EEEEEccccCc
Q 043920 398 PVAMVNRMSMF 408 (504)
Q Consensus 398 PV~i~~~~~~~ 408 (504)
||.--|...++
T Consensus 184 Pv~~FGE~d~~ 194 (297)
T PF03982_consen 184 PVYSFGENDLY 194 (297)
T ss_pred eEEEeCChhhe
Confidence 99999965443
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.0088 Score=57.67 Aligned_cols=41 Identities=27% Similarity=0.568 Sum_probs=31.6
Q ss_pred chhHHHHHHHHhCCCC------CeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 171 GNKKADALLKAFGETQ------PEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~------~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
|..|..+++.+....+ -.+|+|||.||++||+.|+.+++|.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 5567777776643322 2479999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.0086 Score=57.25 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=30.9
Q ss_pred chhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC
Q 043920 171 GNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
|..|...++..+...++ .+++|||.||++||+.||.+++|.
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~~ 221 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVIK 221 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEeC
Confidence 44576666665443332 569999999999999999999873
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.29 Score=49.00 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=94.9
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhhH
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATDA 356 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~~ 356 (504)
.++++|.|.+... ...++++|+++-|...+|..........++..+.+. .+.+..++.. .|.-.+. .....+
T Consensus 84 ~~~~~g~e~l~~a-~~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~~~n~~~~~~~~~~R~~~g~~~i~-~~~~~~ 161 (289)
T PRK08905 84 VKDDHGWEHVEAA-LAEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRPPRKAALRPLMEAGRARGNMRTAP-ATPQGV 161 (289)
T ss_pred eeeecCHHHHHHH-HhcCCCEEEEecccchHHHHHHHHHhcCCceEEEECCCCHHHHHHHHHHhcccCCceec-cCCccH
Confidence 3577887654311 015789999999999999985443333567777775 3455444432 3322232 122447
Q ss_pred HHHHHHhhcC-CEEEEcCceee-CCCcccccc-------ccc----cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 357 STIKKLLEEG-DLAMCPEGTTC-REPFLLRFS-------ALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 357 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk-------~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
..+.+.|++| .+.+-+--..+ .++...+|- +|. ...++||+|+.+.-...
T Consensus 162 ~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~~~----------------- 224 (289)
T PRK08905 162 RMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERLPR----------------- 224 (289)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEcCC-----------------
Confidence 8888999999 67777543322 223333443 331 45689999999854210
Q ss_pred ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCC
Q 043920 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYE 470 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~ 470 (504)
+..++++|.+|+.+. .++.++.++++-+.+++.....
T Consensus 225 -----~~~y~~~~~~~~~~~-----~~~~~~~t~~~~~~lE~~Ir~~ 261 (289)
T PRK08905 225 -----GRGYRLHLRPVQEPL-----PGDKAADAAVINAEIERLIRRF 261 (289)
T ss_pred -----CCcEEEEEecCCCCC-----CCCHHHHHHHHHHHHHHHHHcC
Confidence 112678888887753 3556677777666666654433
|
|
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.15 Score=51.49 Aligned_cols=165 Identities=13% Similarity=0.087 Sum_probs=99.7
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhhH
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATDA 356 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~~ 356 (504)
+++++|.|.+... ..+++++|+++-|...+|..........++..+.+. .+.+-.++.. .|.-.+.+ ..+
T Consensus 109 ~v~v~g~e~l~~a-~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~~~n~~~d~~i~~~R~~~g~~~i~~---~~~ 184 (306)
T PRK08733 109 GVQIEGLEHLQQL-QQQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRRHRNPVFEWAVKRGRLRYATHMFAN---EDL 184 (306)
T ss_pred cEEEeCHHHHHHH-HhCCCCEEEEecCchHHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHHhhcCCcCcCc---ccH
Confidence 5788898765311 014689999999999999976544333466666554 3444444322 33333332 237
Q ss_pred HHHHHHhhcC-CEEEEcCceee-CCCcccccccc-------c----cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 357 STIKKLLEEG-DLAMCPEGTTC-REPFLLRFSAL-------F----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 357 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~G-------~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
+.+.+.|++| .+.+-|-=... +++...+|-.- . .+.++||+|+.+.-.
T Consensus 185 r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~------------------- 245 (306)
T PRK08733 185 RATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRRE------------------- 245 (306)
T ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEEe-------------------
Confidence 7788899998 77777664432 33344455332 1 356899999987431
Q ss_pred ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
++. +++++.||++.. .+++.++.++++-+.+.+....--.++-+-.|
T Consensus 246 ----~~~-y~i~i~~~~~~~----~~~~i~~~t~~~~~~lE~~Ir~~P~Qw~W~hk 292 (306)
T PRK08733 246 ----GGR-YVLKIAPPLADF----PSDDVIADTTRVNAAIEDMVREAPDQYLWIHR 292 (306)
T ss_pred ----CCe-EEEEEECCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHhhHhHHh
Confidence 122 678888888653 25666677777766666665544344444444
|
|
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.43 Score=48.21 Aligned_cols=169 Identities=11% Similarity=0.096 Sum_probs=101.2
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhhH
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATDA 356 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~~ 356 (504)
.++++|.|++... ...++++|+++=|...+|..........++..+.+. .+.+-.++.. .|.-.|. .....+
T Consensus 96 ~~~~~g~e~l~~~-~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 173 (305)
T PRK08734 96 LRQRHGQELYDAA-LASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRPPESEAVDGFLQLVRGGDNVRQVR-AEGPAV 173 (305)
T ss_pred eEEecCHHHHHHH-HHcCCCEEEEccccchHHHHHHHHHccCCceEEEeCCCCHHHHHHHHHHhccCCCeeec-CCchhH
Confidence 4678888876411 014679999999999999987554433466667665 4555444432 3444453 223457
Q ss_pred HHHHHHhhcC-CEEEEcCceee-CCCccccc-------cccc----cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 357 STIKKLLEEG-DLAMCPEGTTC-REPFLLRF-------SALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 357 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F-------k~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
..+.+.|++| .+.+-|.=.-. +++...+| .+|. ...++||+|+.+.-..
T Consensus 174 r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~~------------------ 235 (305)
T PRK08734 174 RQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERIG------------------ 235 (305)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEcC------------------
Confidence 8888999999 77777665432 22333444 2331 3568999998875421
Q ss_pred ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
.+..+++.+.+|++.. ..++..+.++++-+.+.+.....-.++-+-.|
T Consensus 236 ----~~~~y~~~~~~~~~~~----~~~~~~~~~~~~n~~lE~~Ir~~PeQw~W~hr 283 (305)
T PRK08734 236 ----PDLEFALHVQPADPAV----ADPDPLRAATALNAGIERIARRDPAQYQWTYK 283 (305)
T ss_pred ----CCCcEEEEEecCCCCC----CCCCHHHHHHHHHHHHHHHHHcCcHHhhhhhc
Confidence 0112678887776543 24566666666666666654433344434333
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.018 Score=66.68 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred HHHHHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc--E---EE--eeeEEEe-CCeeeeeEeCC----CCCCchhHHHH
Q 043920 111 PESWRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD--L---VL--GTEIATY-KGRATGLVRDP----GVLVGNKKADA 177 (504)
Q Consensus 111 ~~~~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d--~---vi--gt~l~~~-~g~~tG~i~g~----~~l~g~~Kv~~ 177 (504)
+++++.+++.|.+++ +||--..-+..+|++ +|+. . .+ |.++..- |..+.-.++.. -+ .-++|.+.
T Consensus 553 ~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv-sP~qK~~I 630 (917)
T COG0474 553 KEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARV-SPEQKARI 630 (917)
T ss_pred HHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc-CHHHHHHH
Confidence 345668889997775 899999999999999 9962 1 12 4444321 11111111110 02 45799999
Q ss_pred HHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 178 LLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 178 l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
++.+-+......+.||+.||.|+|+.|+-.++..-
T Consensus 631 V~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 631 VEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 99886653444578999999999999999996654
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.011 Score=57.93 Aligned_cols=49 Identities=24% Similarity=0.460 Sum_probs=34.1
Q ss_pred chhHHHHHHH---HhCCC---CCeEEEeCCCCCHHHHhhcccCeeeCCC----cchhcc
Q 043920 171 GNKKADALLK---AFGET---QPEIGLGDRQTDIPFMALCKEGYLVPSK----PEVKAV 219 (504)
Q Consensus 171 g~~Kv~~l~~---~~~~~---~~~~aygDS~~DlpmL~~a~~~~~Vnp~----~~l~~~ 219 (504)
|..|...++. +++.. .-.+++|||.||++||+.++++++++-. +++++.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~ 232 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPG 232 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCcc
Confidence 3345555554 44422 2256999999999999999999998643 357655
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.013 Score=61.80 Aligned_cols=51 Identities=20% Similarity=0.224 Sum_probs=39.4
Q ss_pred CchhHHHHHHHHhCCC---CC----eEEEeCCCCCHHHHhhcc-cCeee-CCCcchhccc
Q 043920 170 VGNKKADALLKAFGET---QP----EIGLGDRQTDIPFMALCK-EGYLV-PSKPEVKAVT 220 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~---~~----~~aygDS~~DlpmL~~a~-~~~~V-np~~~l~~~A 220 (504)
.|..|..+|+.+.... ++ .+|+|||.||++||+.++ +++++ |+.+++++.|
T Consensus 172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a 231 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWY 231 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHH
Confidence 4557888887665433 33 469999999999999999 79998 4677888754
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.076 Score=57.48 Aligned_cols=83 Identities=19% Similarity=0.228 Sum_probs=65.0
Q ss_pred cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.+++++ ++.+++.|..+ ++||-...-++.++++ +|+ . ..+ ..++|.+.++++.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi---~-----------------~~~-~p~~K~~~v~~l~ 403 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI---F-----------------ARV-TPEEKAALVEALQ 403 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc---e-----------------ecc-CHHHHHHHHHHHH
Confidence 3456655 45788899666 5899999999999999 886 0 113 6789999999875
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
.+.....+.||+.||.|+|+.|+-.++++
T Consensus 404 ~~g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 404 KKGRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HCCCEEEEECCChhhHHHHHhCCCccccc
Confidence 44333558999999999999999998887
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.45 Score=45.62 Aligned_cols=176 Identities=14% Similarity=0.129 Sum_probs=90.3
Q ss_pred cceEEEEecCCccccCCCcHH-HHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHh-cCCCHHHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFP-YFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASF-VGLRVTDIESV 96 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~l~~~ 96 (504)
.-..+.||+||||++++..+. .......+.+....+. ......+.....+.+.+...+ --++.+++...
T Consensus 9 ~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~---------~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e 79 (222)
T KOG2914|consen 9 KVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWD---------VKVKSMGKRTSEAARLFVKKLPDPVSREEFNKE 79 (222)
T ss_pred ceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHH---------HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHH
Confidence 345799999999998766432 2221212222222111 111111222221222222222 34677776554
Q ss_pred HHHHcchhhhc-ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcC-----CcE-EEeeeEEEeCCeeeeeEeC
Q 043920 97 ARAVLPKFYAS-DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLA-----ADL-VLGTEIATYKGRATGLVRD 165 (504)
Q Consensus 97 ~~~~~~~~~~~-~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg-----~d~-vigt~l~~~~g~~tG~i~g 165 (504)
-++-..+.+.. ..-|.+.+ .++.+|..+ ++|+|.+..++--..+ ++ +++ ++|+.-++++|+-.
T Consensus 80 ~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~----- 153 (222)
T KOG2914|consen 80 EEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPD----- 153 (222)
T ss_pred HHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCC-----
Confidence 44433333222 23355555 556788665 6888876666655554 33 332 34455555555221
Q ss_pred CCCCCchhHHHHHHHHhCCCC--CeEEEeCCCCCHHHHhhcccCeeeCCCcc
Q 043920 166 PGVLVGNKKADALLKAFGETQ--PEIGLGDRQTDIPFMALCKEGYLVPSKPE 215 (504)
Q Consensus 166 ~~~l~g~~Kv~~l~~~~~~~~--~~~aygDS~~DlpmL~~a~~~~~Vnp~~~ 215 (504)
+ .+=-+ + .+.++... .++.+.||.+=+..-..|+..++..|++.
T Consensus 154 --P-di~l~--A-~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~ 199 (222)
T KOG2914|consen 154 --P-DIYLK--A-AKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPD 199 (222)
T ss_pred --c-hHHHH--H-HHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCC
Confidence 1 11011 2 22345433 35689999999999999999988888743
|
|
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.35 Score=51.51 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=67.5
Q ss_pred CCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhhHHHHHHHhhcC-CEEEE
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATDASTIKKLLEEG-DLAMC 371 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~~~~~~~~l~~G-~l~IF 371 (504)
.++|+|+++-|...||..........|+..+.+. .+.+-.++.. .|.-.|.. ...+..+.+.|++| .+.+-
T Consensus 138 ~gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp~kNp~ld~li~~~R~r~G~~lI~~--~~giR~liraLk~G~~vgiL 215 (454)
T PRK05906 138 EQEGAILFCGHQANWELPFLYITKRYPGLAFAKPIKNRRLNKKIFSLRESFKGKIVPP--KNGINQALRALHQGEVVGIV 215 (454)
T ss_pred CCCCEEEEeehhhHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHhcCCeeecC--chHHHHHHHHHhcCCEEEEE
Confidence 4789999999999999976543334566667765 4555555432 34434433 24578888899999 88888
Q ss_pred cCceeeCCCccccccc-------cc----cccCCeEEEEEEEc
Q 043920 372 PEGTTCREPFLLRFSA-------LF----AELTDELVPVAMVN 403 (504)
Q Consensus 372 PEGTrs~~~~l~~Fk~-------G~----~~~~~pIvPV~i~~ 403 (504)
|.-.-..++...+|-. |. .+.++||+|+.+.-
T Consensus 216 ~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R 258 (454)
T PRK05906 216 GDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYR 258 (454)
T ss_pred eCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEE
Confidence 7755433444455522 21 35689999988754
|
|
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.31 Score=49.16 Aligned_cols=167 Identities=13% Similarity=0.163 Sum_probs=95.6
Q ss_pred eEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhh
Q 043920 282 VRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATD 355 (504)
Q Consensus 282 i~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~ 355 (504)
-+++++|.|.+... ...++++|+++=|...+|..........++..+.+. .+.+-.++.. .|.-.++++ .
T Consensus 106 ~~v~~~g~e~l~~a-~~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~~n~~~d~~~~~~R~~~g~~~i~~~---~ 181 (305)
T PRK08025 106 KWFDVEGLDNLKRA-QMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNKLMEWVQTRGRMRSNKAMIGRN---N 181 (305)
T ss_pred CeEEEECHHHHHHH-HhCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCCCCHHHHHHHHHHHhccCCcCcCcc---c
Confidence 47888898875311 014679999999999999986544333466666665 3444444322 343344322 3
Q ss_pred HHHHHHHhhcC-CEEEEcCceee-CCCccccc--------cccc----cccCCeEEEEEEEccccCccccccCCCCCCcc
Q 043920 356 ASTIKKLLEEG-DLAMCPEGTTC-REPFLLRF--------SALF----AELTDELVPVAMVNRMSMFHGTTARGWKGMDP 421 (504)
Q Consensus 356 ~~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~F--------k~G~----~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~ 421 (504)
+..+.+.|++| .+.+-|-=.-. +++...+| .+|. .+.++||+|+.+.....
T Consensus 182 ~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R~~~--------------- 246 (305)
T PRK08025 182 LRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRKAD--------------- 246 (305)
T ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEEeCC---------------
Confidence 67788889999 77777553322 22333343 2231 35689999999854210
Q ss_pred ccccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHH
Q 043920 422 FYFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDK 479 (504)
Q Consensus 422 ~~~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk 479 (504)
+..+++.+.||++.. .++..+.++.+-+.+.+.....-.++-+..|
T Consensus 247 -------~~~~~i~~~~~~~~~-----~~~~~~~~~~~n~~lE~~Ir~~PeQw~W~hk 292 (305)
T PRK08025 247 -------YSGYRLFITPEMEGY-----PTDENQAAAYMNKIIEKEIMRAPEQYLWIHR 292 (305)
T ss_pred -------CCeEEEEEeCCccCC-----CCCHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 111577888887643 2344444555545555554433333333333
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.015 Score=56.91 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=40.1
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeC----CCCCHHHHh---hcccCeeeCCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQPEIGLGD----RQTDIPFMA---LCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygD----S~~DlpmL~---~a~~~~~Vnp~~~l~~~A~ 221 (504)
.|-.|...|+.+.....-.+|+|| +.||++||+ .+|++|+ |+.+.++.+|+
T Consensus 185 ~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 185 KGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred CCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 577899999998766444679999 899999999 5566666 78777777665
|
|
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.98 Score=45.32 Aligned_cols=170 Identities=10% Similarity=0.017 Sum_probs=97.9
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCCCccEEEec--ccchhhhhcc----CceeEeecCChhhH
Q 043920 283 RVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS--VSRLSEIISP----IKAVRLSRDRATDA 356 (504)
Q Consensus 283 ~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~--~~~~~~~~~~----~g~i~i~R~~~~~~ 356 (504)
.++++|.|.+... ..+++++|+++=|...|+..........+...+.+. .+.+-.++.. .|.-.|. .+...+
T Consensus 95 ~~~~~g~e~l~~a-~~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~~~n~~~d~~~~~~R~~~g~~~i~-~~~~~~ 172 (295)
T PRK05645 95 VREVEGLEVLEQA-LASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNRVAP-STKEGI 172 (295)
T ss_pred eeEecCHHHHHHH-HhcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHhCCCCCeEee-cCcccH
Confidence 5578888765311 014678999999999999976433322344445543 3444444322 3434442 223357
Q ss_pred HHHHHHhhcC-CEEEEcCceee-CCCcccccccc--------c---cccCCeEEEEEEEccccCccccccCCCCCCcccc
Q 043920 357 STIKKLLEEG-DLAMCPEGTTC-REPFLLRFSAL--------F---AELTDELVPVAMVNRMSMFHGTTARGWKGMDPFY 423 (504)
Q Consensus 357 ~~~~~~l~~G-~l~IFPEGTrs-~~~~l~~Fk~G--------~---~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~ 423 (504)
..+.+.|++| .+.|-+-=..+ .++...+|-.- . ...++||+|+.+....
T Consensus 173 r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~~------------------ 234 (295)
T PRK05645 173 LSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLP------------------ 234 (295)
T ss_pred HHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEcC------------------
Confidence 7788889999 77777554432 23334455222 1 3458999999886521
Q ss_pred ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHH
Q 043920 424 FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKY 480 (504)
Q Consensus 424 ~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~ 480 (504)
.+..+++++.++++.. .+++.++.++.+-+.+.+....--.++-+..|+
T Consensus 235 ----~~~~y~i~~~~~~~~~----~~~~~~~~t~~~~~~lE~~Ir~~PeQw~W~hkR 283 (295)
T PRK05645 235 ----DGSGYKVILEAAPEDM----YSTDVEVSAAAMSKVVERYVRAYPSQYMWSMKR 283 (295)
T ss_pred ----CCCeEEEEEecCCcCC----CCCCHHHHHHHHHHHHHHHHHcCcHHhhhhhhh
Confidence 1112677887665432 245666777777666666654444444444443
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.45 Score=46.70 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=42.7
Q ss_pred HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEEEe-CCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 116 VFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIATY-KGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 116 ~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~~~-~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.++++|+.+ ++||-+-..+.++.+. |+++. ++|..-.+- +. |++.-... .....++.+-++..+
T Consensus 31 ~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~---~~~i~~~~-l~~~~~~~i~~~~~~ 97 (264)
T COG0561 31 RLREKGVKVVLATGRPLPDVLSILEE-LGLDGPLITFNGALIYNG---GELLFQKP-LSREDVEELLELLED 97 (264)
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHH-cCCCccEEEeCCeEEecC---CcEEeeec-CCHHHHHHHHHHHHh
Confidence 455689776 5899999999999999 99984 555443331 22 55544434 556677777776643
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.59 Score=44.59 Aligned_cols=91 Identities=11% Similarity=0.060 Sum_probs=47.1
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHH-HHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVE-AFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~-~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
++|.+. +.++++|..+ |+|++....+. .+.+. .+ ++.+++.+ .. .+ +.- .++ .+-.....
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~-~~---~~-~~~-KP~----p~~~~~a~ 147 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGD-DP---EV-KQG-KPA----PDIFLAAA 147 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECC-hh---hc-cCC-CCC----cHHHHHHH
Confidence 456554 4677889665 68998764333 33332 23 24444433 00 00 000 010 11222222
Q ss_pred HHhC---CC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 180 KAFG---ET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 180 ~~~~---~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
+.++ .. .-.+.+|||..|+..-+.+|-+.+-
T Consensus 148 ~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 148 RRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 2333 11 2256899999999999888876543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.91 E-value=1.2 Score=42.75 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=49.2
Q ss_pred ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhc---CCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH-
Q 043920 108 DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFL---AADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL- 179 (504)
Q Consensus 108 ~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~L---g~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~- 179 (504)
.++|++.+ .++++|..+ |+|.+.....+.+.+. + ++...+. +.+...+ |. . .+.+..+
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~-------~~fd~~~-g~---K--P~p~~y~~ 160 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFS-------GYFDTTV-GL---K--TEAQSYVK 160 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcc-------eEEEeCc-cc---C--CCHHHHHH
Confidence 36666655 667899776 6888887777777666 4 2221111 1111100 10 1 1222233
Q ss_pred --HHhCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 180 --KAFGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 180 --~~~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
+.++.. +-.+.+||+..|+.--+.+|-..
T Consensus 161 i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 161 IAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred HHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 333422 12568999999999999988765
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.04 Score=53.79 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=37.8
Q ss_pred CchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhh-cccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMAL-CKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~-a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+..|...++.+....+ -.+++|||.||++||+. ++.+++|. ..+++++.+.
T Consensus 164 ~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred CCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence 34467777776544333 25699999999999998 77888885 6777886553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.26 Score=47.84 Aligned_cols=143 Identities=16% Similarity=0.155 Sum_probs=81.5
Q ss_pred cCCCHHHHHHHHHHHcchhhhcccCHHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEe-CCee
Q 043920 86 VGLRVTDIESVARAVLPKFYASDLHPESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATY-KGRA 159 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~-~g~~ 159 (504)
.|++.+++++.+++.- ...+.-..+..+.+++.+..+ |.||+...+++.+.++ -|. -+|+++.+.++ +|++
T Consensus 73 ~~l~k~~i~~~V~~s~--i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l 149 (246)
T PF05822_consen 73 QGLTKSEIEEAVKESD--IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVL 149 (246)
T ss_dssp HT-BGGGHHHHHHCS-----B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBE
T ss_pred cCcCHHHHHHHHHhcc--hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceE
Confidence 3678888888777542 112223356677888888776 5799999999999998 674 37999999995 7888
Q ss_pred eeeEeCCCCCCchhHHHH-H--HHHhCC---CCCeEEEeCCCCCHHHHhhc---ccCeee---CCCcchhccccccCCCc
Q 043920 160 TGLVRDPGVLVGNKKADA-L--LKAFGE---TQPEIGLGDRQTDIPFMALC---KEGYLV---PSKPEVKAVTCDKLPKP 227 (504)
Q Consensus 160 tG~i~g~~~l~g~~Kv~~-l--~~~~~~---~~~~~aygDS~~DlpmL~~a---~~~~~V---np~~~l~~~A~~~~~W~ 227 (504)
+|.-. + ..+--+|-+. + ..++.+ ..-.+-.|||.+|+-|-.-+ ++..-| |-+. =..+.++...|-
T Consensus 150 ~gF~~-~-lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~v-e~~l~~Y~~~yD 226 (246)
T PF05822_consen 150 VGFKG-P-LIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKV-EENLEKYLEAYD 226 (246)
T ss_dssp EEE-S-S----TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSH-HHHHHHHHCCSS
T ss_pred eecCC-C-ceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCH-HHHHHHHHhcCC
Confidence 87532 2 1122234332 2 122222 12234689999999998766 222222 2221 223556677899
Q ss_pred ee-eeCCC
Q 043920 228 II-FHDGR 234 (504)
Q Consensus 228 i~-f~~~r 234 (504)
|+ -+|+-
T Consensus 227 IVlv~D~t 234 (246)
T PF05822_consen 227 IVLVDDQT 234 (246)
T ss_dssp EEEET--B
T ss_pred EEEECCCC
Confidence 98 56653
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.054 Score=53.69 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=33.4
Q ss_pred hHHHHHHHHh---CC-C-CCeEEEeCCCCCHHHHhhcccCeeeC-CCcchh
Q 043920 173 KKADALLKAF---GE-T-QPEIGLGDRQTDIPFMALCKEGYLVP-SKPEVK 217 (504)
Q Consensus 173 ~Kv~~l~~~~---~~-~-~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~ 217 (504)
.|...++.+. +. . .-.+++|||.||++|++.+++++++. ..++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 5666666554 32 2 22458999999999999999999995 566666
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.81 Score=51.37 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=62.2
Q ss_pred CCCcEEEEecCCCCChHHHHHHhh-CCCccEEEecccchhhhhccCceeEeec--CC-hhhHHHHHHHhhcC-CEEEEcC
Q 043920 299 GQTGVLFVCSHRTLLDPIFLSVAL-GRPIPTVTYSVSRLSEIISPIKAVRLSR--DR-ATDASTIKKLLEEG-DLAMCPE 373 (504)
Q Consensus 299 ~~~~~viVaNH~S~lD~~~l~~~~-~~~~~~v~k~~~~~~~~~~~~g~i~i~R--~~-~~~~~~~~~~l~~G-~l~IFPE 373 (504)
.++|+|+++-|.+.|+....+... ..|+..+.+..... -...|.-.|.. .. ...+..+.+.|++| .|+|-|-
T Consensus 477 ~~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~~~---R~~~g~~~i~~~~~~~~~~~r~i~~aLk~g~~v~il~D 553 (656)
T PRK15174 477 DQRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPGVL---KGGYGERLISVSDKSEADVVRACMQTLHSGQSLVVAID 553 (656)
T ss_pred cCCCEEEEecCcchhhHHHHHHHHcCCCceeeecchHHH---HHhcCCceeccCCCCcchHHHHHHHHHHcCCeEEEEeC
Confidence 467999999999999997755433 23555555544321 12333333432 22 34578899999999 7778755
Q ss_pred ceeeCCCccccc-------cccc----cccCCeEEEEEEEc
Q 043920 374 GTTCREPFLLRF-------SALF----AELTDELVPVAMVN 403 (504)
Q Consensus 374 GTrs~~~~l~~F-------k~G~----~~~~~pIvPV~i~~ 403 (504)
-.-..++...+| -.|. .+.++||+|+....
T Consensus 554 q~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~ 594 (656)
T PRK15174 554 GALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIW 594 (656)
T ss_pred CCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEE
Confidence 443322323344 3331 35689999998843
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.09 E-value=1 Score=43.42 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=42.9
Q ss_pred HHHHH---HHhhCCCEEE-EecCcHHH---HHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCc-hhHHHHHHHHh
Q 043920 111 PESWR---VFSSCGKRCV-LTANPRIM---VEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVG-NKKADALLKAF 182 (504)
Q Consensus 111 ~~~~~---~~~~~G~~vv-vSas~~~~---v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g-~~Kv~~l~~~~ 182 (504)
|++++ .++++|+.|+ +||=.+.. .....+. .|++.. ..|-...-. .... .. +=|-++-++..
T Consensus 123 p~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~--~~LiLR~~~------d~~~-~~~~yKs~~R~~l~ 192 (229)
T TIGR01675 123 PEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW--KHLILRGLE------DSNK-TVVTYKSEVRKSLM 192 (229)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc--CeeeecCCC------CCCc-hHhHHHHHHHHHHH
Confidence 55554 6678998875 89988766 4455566 687632 333332100 0000 01 11655555544
Q ss_pred CCCCCe--EEEeCCCCCH
Q 043920 183 GETQPE--IGLGDRQTDI 198 (504)
Q Consensus 183 ~~~~~~--~aygDS~~Dl 198 (504)
. .++. ..+||..+|+
T Consensus 193 ~-~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 193 E-EGYRIWGNIGDQWSDL 209 (229)
T ss_pred h-CCceEEEEECCChHHh
Confidence 3 3444 4799999997
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.49 Score=56.04 Aligned_cols=44 Identities=11% Similarity=-0.025 Sum_probs=34.0
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCC
Q 043920 170 VGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSK 213 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 213 (504)
.-++|.+.++.+-.........||+.||.|.|+.|+-.++..-.
T Consensus 786 sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 786 APDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 44678887777654333344799999999999999999999753
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.068 Score=50.26 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=33.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V 210 (504)
.|..|...++.++...++ .+++|||.+|++|++.++.++++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 466888888887665443 56999999999999999999875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.48 Score=52.94 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=74.7
Q ss_pred HHHHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeee-EeC------------C----CCCCchh
Q 043920 112 ESWRVFSSCGKRCV-LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGL-VRD------------P----GVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~-i~g------------~----~~l~g~~ 173 (504)
++++.+++.|.+|+ |||-...-++.||++ +|+- +..-++.+-.+||+ +++ . .| .-++
T Consensus 591 ~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~---~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~-~P~H 665 (972)
T KOG0202|consen 591 DAIELCRQAGIRVIMITGDNKETAEAIARE-IGIF---SEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA-EPQH 665 (972)
T ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCC---cCCccccccccchhhhhcCCHHHHHHHhhcceEEEec-Cchh
Confidence 34557889998875 899999999999999 9962 22222223344442 111 0 02 3467
Q ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCc-chhccccccCCCceeeeCCCc
Q 043920 174 KADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKP-EVKAVTCDKLPKPIIFHDGRL 235 (504)
Q Consensus 174 Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~-~l~~~A~~~~~W~i~f~~~r~ 235 (504)
|.+.++.+-....+...-||+.||.|=|+.|+-.++-.-+. ...+-|. .++..|--|
T Consensus 666 K~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs-----DMVL~DDnF 723 (972)
T KOG0202|consen 666 KLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS-----DMVLADDNF 723 (972)
T ss_pred HHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh-----hcEEecCcH
Confidence 88888776554444445899999999999999999998543 3444333 355554444
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.8 Score=43.37 Aligned_cols=76 Identities=22% Similarity=0.402 Sum_probs=48.2
Q ss_pred EEecCcHH---HHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHH-HHHHHh---CCCCCeEEEeCCCCC
Q 043920 125 VLTANPRI---MVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKAD-ALLKAF---GETQPEIGLGDRQTD 197 (504)
Q Consensus 125 vvSas~~~---~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~-~l~~~~---~~~~~~~aygDS~~D 197 (504)
|++=|-+. ....-..+ .|+..+.|++.-.. .+ +| .|.+|+. ++-+.+ +.....++.|||.||
T Consensus 153 i~~rs~d~~~~~~~~~L~e-~glt~v~garf~~v--------~~-as-~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD 221 (274)
T COG3769 153 IIWRSSDERMAQFTARLNE-RGLTFVHGARFWHV--------LD-AS-AGKGQAANWLLETYRRLGGARTTLGLGDGPND 221 (274)
T ss_pred eeecccchHHHHHHHHHHh-cCceEEeccceEEE--------ec-cc-cCccHHHHHHHHHHHhcCceeEEEecCCCCCc
Confidence 45555454 23333355 78888888886432 12 24 5555554 233322 222346799999999
Q ss_pred HHHHhhcccCeeeC
Q 043920 198 IPFMALCKEGYLVP 211 (504)
Q Consensus 198 lpmL~~a~~~~~Vn 211 (504)
.|||+..+.++.|.
T Consensus 222 ~Pl~ev~d~AfiV~ 235 (274)
T COG3769 222 APLLEVMDYAFIVK 235 (274)
T ss_pred ccHHHhhhhheeec
Confidence 99999999999997
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.24 Score=48.39 Aligned_cols=46 Identities=24% Similarity=0.299 Sum_probs=33.1
Q ss_pred CchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCeeeCC-Ccc
Q 043920 170 VGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYLVPS-KPE 215 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~ 215 (504)
.+.+|-.+++-.....+ -.++.|||-||++||..+.++++|.. +++
T Consensus 162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 45578888776654433 25689999999999999999999965 666
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.53 Score=42.58 Aligned_cols=20 Identities=30% Similarity=0.569 Sum_probs=16.5
Q ss_pred EEEecCCccccCCCcHHHHH
Q 043920 23 VVADMDGTLLRGRSSFPYFA 42 (504)
Q Consensus 23 a~FD~DgTL~~~ds~~~~~~ 42 (504)
.+.|.||||++.+++.+++-
T Consensus 9 ~ciDIDGtit~~~t~~~~~n 28 (194)
T COG5663 9 CCIDIDGTITDDPTFAPYLN 28 (194)
T ss_pred eeeccCCceecCcccchhcc
Confidence 57899999999999877543
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=90.67 E-value=1.2 Score=52.88 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=65.3
Q ss_pred HHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC---c-EEEeeeEE-Ee--------------------------CC-
Q 043920 111 PESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA---D-LVLGTEIA-TY--------------------------KG- 157 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~---d-~vigt~l~-~~--------------------------~g- 157 (504)
+++++.+++.|.++ ++||--..-+..+|+. .|+ + .++--+.. .+ +.
T Consensus 637 ~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 715 (1057)
T TIGR01652 637 PETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNV 715 (1057)
T ss_pred HHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCce
Confidence 56677899999777 5899999999999998 785 1 11110000 00 00
Q ss_pred --eeeee------------------------EeCCCCCCchhHHHHHHHHhCC-CCCeEEEeCCCCCHHHHhhcccCeee
Q 043920 158 --RATGL------------------------VRDPGVLVGNKKADALLKAFGE-TQPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 158 --~~tG~------------------------i~g~~~l~g~~Kv~~l~~~~~~-~~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
..+|. +-. .+ ..++|.+.++..-.. .....+.||+.||.|||+.|+-.+.+
T Consensus 716 ~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a-R~-sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 716 ALVIDGKSLGYALDEELEKEFLQLALKCKAVICC-RV-SPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred EEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe-CC-CHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 12232 111 11 346777777665443 34567999999999999999999988
Q ss_pred CCCc
Q 043920 211 PSKP 214 (504)
Q Consensus 211 np~~ 214 (504)
.-..
T Consensus 794 ~g~e 797 (1057)
T TIGR01652 794 SGKE 797 (1057)
T ss_pred cChH
Confidence 6543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.094 Score=47.69 Aligned_cols=19 Identities=32% Similarity=0.510 Sum_probs=14.2
Q ss_pred eEEEEecCCccccCCCcHH
Q 043920 21 HTVVADMDGTLLRGRSSFP 39 (504)
Q Consensus 21 ~~a~FD~DgTL~~~ds~~~ 39 (504)
++|+||+||||+...|...
T Consensus 1 Kia~fD~DgTLi~~~s~~~ 19 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK 19 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT
T ss_pred CEEEEeCCCCccCCCCCCc
Confidence 6899999999999887443
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.55 E-value=1 Score=40.96 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=52.6
Q ss_pred HHHHHHhhCCCEE-EEecC---------------cHHHHHHHHHhhcCCc--EEE-eeeEEEeCCeeeeeEeCCCCCCch
Q 043920 112 ESWRVFSSCGKRC-VLTAN---------------PRIMVEAFLKDFLAAD--LVL-GTEIATYKGRATGLVRDPGVLVGN 172 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas---------------~~~~v~~ia~~~Lg~d--~vi-gt~l~~~~g~~tG~i~g~~~l~g~ 172 (504)
+++++++++|+.+ |+|.. +...++.+++. +|+. .++ |+.... +. +....
T Consensus 36 e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~ii~~~~~~~------~~-----~~~~K 103 (161)
T TIGR01261 36 PALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGIIFDDVLICPHFPD------DN-----CDCRK 103 (161)
T ss_pred HHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCceeEEEECCCCCC------CC-----CCCCC
Confidence 4566778899776 57875 46678888888 8874 333 211000 00 10112
Q ss_pred hHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 173 KKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
-|.+.++......+. .+++||+.+|+...+.+|-..+.=.
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 234444444333322 5689999999999998887765433
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=88.51 E-value=0.82 Score=45.75 Aligned_cols=93 Identities=11% Similarity=0.096 Sum_probs=59.5
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-----EEeeeEEEeCCe---eeeeEeCCCCCCchhHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-----VLGTEIATYKGR---ATGLVRDPGVLVGNKKAD 176 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-----vigt~l~~~~g~---~tG~i~g~~~l~g~~Kv~ 176 (504)
.+|++.+ .++++|..+ ++|+.++...+...+. ||.+. ++|.+.. .. -.+. +. . ..+-+.+
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~---~~~~~~~~~--~k-p-~p~~~~~ 259 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPD---MHFQREQGD--KR-P-DDVVKEE 259 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcch---hhhcccCCC--CC-C-cHHHHHH
Confidence 4566555 667889776 5899999999999998 77654 2333310 00 0000 11 1 3345666
Q ss_pred HHHHHhC-CCCCeEEEeCCCCCHHHHhhcccCee
Q 043920 177 ALLKAFG-ETQPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 177 ~l~~~~~-~~~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.+++... .....+++||+.+|+...+.+|-+++
T Consensus 260 ~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 260 IFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 6766432 22446789999999999999998753
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.80 E-value=0.48 Score=46.87 Aligned_cols=44 Identities=23% Similarity=0.184 Sum_probs=35.4
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhc----ccCeeeCCC
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALC----KEGYLVPSK 213 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a----~~~~~Vnp~ 213 (504)
.|..|...+++.+...++ .+++||+.||.+||+.+ +.+++|...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a 222 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG 222 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC
Confidence 466899999887665442 46899999999999999 888888754
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.75 E-value=26 Score=33.44 Aligned_cols=58 Identities=17% Similarity=0.346 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHcchhhhcccCHHH-HH-HH---hhCCCEEEEecCcHHHHHHHHHhhcCC----cEEEeee
Q 043920 89 RVTDIESVARAVLPKFYASDLHPES-WR-VF---SSCGKRCVLTANPRIMVEAFLKDFLAA----DLVLGTE 151 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~G~~vvvSas~~~~v~~ia~~~Lg~----d~vigt~ 151 (504)
+.+|..+++...+| +.. +.|+. ++ .+ +.+ +.++-|-+...=+..+.+. ||+ |.++|-+
T Consensus 82 d~deY~~~V~~~LP--lq~-LkPD~~LRnlLL~l~~r-~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e 148 (244)
T KOG3109|consen 82 DADEYHRFVHGRLP--LQD-LKPDPVLRNLLLSLKKR-RKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFE 148 (244)
T ss_pred CHHHHHHHhhccCc--Hhh-cCCCHHHHHHHHhCccc-cEEEecCCcHHHHHHHHHH-hChHHhccceeEee
Confidence 57777777777665 222 44433 33 22 223 2667899999999999999 997 4555544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=87.69 E-value=1.3 Score=42.76 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=42.4
Q ss_pred HHHHhhCCCEEE-EecCcHHHHH---HHHHhhcCCc---EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC-C
Q 043920 114 WRVFSSCGKRCV-LTANPRIMVE---AFLKDFLAAD---LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE-T 185 (504)
Q Consensus 114 ~~~~~~~G~~vv-vSas~~~~v~---~ia~~~Lg~d---~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~-~ 185 (504)
++.++++|..|+ ||+=++..-+ .-.+. .|+. +++- ...+. . .++...+-|..+.++.... .
T Consensus 124 ~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~l---r~~~~-~------~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 124 YNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLIL---RPDKD-P------SKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp HHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEE---EEESS-T------SS------SHHHHHHHHHTTE
T ss_pred HHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhcc---ccccc-c------ccccccccchHHHHHHHHcCC
Confidence 447788998875 8876555322 33344 5763 2221 11110 0 0011122355554444332 2
Q ss_pred CCeEEEeCCCCCHHHHh---hcccCeeeCCCc
Q 043920 186 QPEIGLGDRQTDIPFMA---LCKEGYLVPSKP 214 (504)
Q Consensus 186 ~~~~aygDS~~DlpmL~---~a~~~~~Vnp~~ 214 (504)
.+...+||+.+|+.=.+ ..+..+.+-|.|
T Consensus 193 ~Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPNp 224 (229)
T PF03767_consen 193 RIIANIGDQLSDFSGAKTAGARAERWFKLPNP 224 (229)
T ss_dssp EEEEEEESSGGGCHCTHHHHHHHTTEEE-TTS
T ss_pred cEEEEeCCCHHHhhcccccccccceEEEcCCC
Confidence 34447999999977621 223455554544
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=87.50 E-value=3.7 Score=35.46 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=48.5
Q ss_pred HHHHHhhCCCEE-EEecCc--------HHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 113 SWRVFSSCGKRC-VLTANP--------RIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~--------~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
++++++++|..+ |+|.+. ...++.+.++ +|++.... + .++....| |.+.++....
T Consensus 33 ~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~----~----~~~~~~KP-------~~~~~~~~~~ 96 (132)
T TIGR01662 33 ALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVL----Y----ACPHCRKP-------KPGMFLEALK 96 (132)
T ss_pred HHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEE----E----ECCCCCCC-------ChHHHHHHHH
Confidence 455677789776 589998 7888889998 88752111 1 11101111 2333333322
Q ss_pred CC-----CCeEEEeC-CCCCHHHHhhcccCe
Q 043920 184 ET-----QPEIGLGD-RQTDIPFMALCKEGY 208 (504)
Q Consensus 184 ~~-----~~~~aygD-S~~DlpmL~~a~~~~ 208 (504)
.. .-.+.+|| +..|+.+.+.+|-..
T Consensus 97 ~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 97 RFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred HcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 22 12467999 799999998888654
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=87.20 E-value=2.3 Score=39.02 Aligned_cols=97 Identities=19% Similarity=0.120 Sum_probs=52.7
Q ss_pred HHHHHHHhhCCCEE-EEecCcH---------------HHHHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCCCch
Q 043920 111 PESWRVFSSCGKRC-VLTANPR---------------IMVEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVLVGN 172 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~~---------------~~v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l~g~ 172 (504)
.+++++++++|+.+ |+|.++. .+++.+... +|+ +.++.+..... | ++++... +..+.
T Consensus 32 ~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~~~~~~~~-~--~~~~~~~-~~~~K 106 (176)
T TIGR00213 32 IDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVDLDGIYYCPHHPE-G--VEEFRQV-CDCRK 106 (176)
T ss_pred HHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCCccEEEECCCCCc-c--cccccCC-CCCCC
Confidence 34566788899876 5888874 344455555 453 44443321111 1 1111111 11122
Q ss_pred hHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCe--eeCC
Q 043920 173 KKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGY--LVPS 212 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~--~Vnp 212 (504)
-+.+.++..+...++ .+.+|||..|+..-+.+|-.. .|+-
T Consensus 107 P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 107 PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEec
Confidence 234444444333222 468999999999999999875 4443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.94 E-value=1.1 Score=44.47 Aligned_cols=124 Identities=16% Similarity=0.080 Sum_probs=77.1
Q ss_pred HHHhhhhcceEEEEcCCCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhC---CCccEEEec-ccchhhhhccCceeEe
Q 043920 273 VYYAFWALGVRVIVKGTPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALG---RPIPTVTYS-VSRLSEIISPIKAVRL 348 (504)
Q Consensus 273 ~~~~~~~~Gi~v~v~G~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~---~~~~~v~k~-~~~~~~~~~~~g~i~i 348 (504)
.+.+...+|.++.-.+.+.++ +++++++||||.-..|..+....+. ..+..++.. --..+.++.. .-+.|
T Consensus 57 y~vf~~el~~~l~~~~~~~~~-----d~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~-~ef~v 130 (292)
T COG3176 57 YRVFSEELDARLDAAALERIP-----DQDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSA-LEFPV 130 (292)
T ss_pred hhhhhhhcCcccccccccccC-----CCCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCccc-cccce
Confidence 455666778888888888877 7889999999998899998866543 234445442 1111122211 12233
Q ss_pred ec---CChh-h----HHHHHHHhhcC-CEEEEcCceeeC--CCcccccccc---c----cccCCeEEEEEEEc
Q 043920 349 SR---DRAT-D----ASTIKKLLEEG-DLAMCPEGTTCR--EPFLLRFSAL---F----AELTDELVPVAMVN 403 (504)
Q Consensus 349 ~R---~~~~-~----~~~~~~~l~~G-~l~IFPEGTrs~--~~~l~~Fk~G---~----~~~~~pIvPV~i~~ 403 (504)
+. ..+. . ...+.+.+++| .|++||-|--.- .+. +.-..| + .+-+.++.|+.+++
T Consensus 131 ~~~~~~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~-~~~~~gcaS~~~~~~~~~a~~~p~~~~~ 202 (292)
T COG3176 131 DWLEELRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGR-LDDMPGCASVPGLPRKHGAALAPVHHNG 202 (292)
T ss_pred eeecccChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccC-cccCccccccccchhhcccccchhheec
Confidence 32 1222 2 23445678889 899999998762 222 233333 2 23578999999997
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=86.68 E-value=5.4 Score=39.12 Aligned_cols=83 Identities=18% Similarity=0.209 Sum_probs=49.0
Q ss_pred HHHHHHHhhCCCEEE-EecCcHHHHHHHHHhh--cCCcEEEee---eEEE-----eCC------eeeeeEeCCCCCCchh
Q 043920 111 PESWRVFSSCGKRCV-LTANPRIMVEAFLKDF--LAADLVLGT---EIAT-----YKG------RATGLVRDPGVLVGNK 173 (504)
Q Consensus 111 ~~~~~~~~~~G~~vv-vSas~~~~v~~ia~~~--Lg~d~vigt---~l~~-----~~g------~~tG~i~g~~~l~g~~ 173 (504)
|+.++.++++|..|+ +|+.+..+....++++ +|+|--=++ +..+ .++ ...|-+- | -|..
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf---t-~~~~ 162 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF---T-GGQD 162 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE---e-CCCc
Confidence 667778899998887 8999888777777652 576521121 1000 000 1123332 2 5667
Q ss_pred HHHHHHHHhCCCCC----eEEEeCCCCC
Q 043920 174 KADALLKAFGETQP----EIGLGDRQTD 197 (504)
Q Consensus 174 Kv~~l~~~~~~~~~----~~aygDS~~D 197 (504)
|...|..++...+. .+++.|+...
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~n 190 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKEN 190 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHH
Confidence 88999988765431 3467766554
|
The function is not known. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=86.22 E-value=3.2 Score=49.68 Aligned_cols=45 Identities=13% Similarity=0.258 Sum_probs=33.0
Q ss_pred CchhHHHHHHHHhCC-CCCeEEEeCCCCCHHHHhhcccCeeeCCCc
Q 043920 170 VGNKKADALLKAFGE-TQPEIGLGDRQTDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~-~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~ 214 (504)
.-.+|.+.++..-.. ..+.+|.||+.||.||++.|+-.+-+.-..
T Consensus 855 sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~E 900 (1178)
T PLN03190 855 APLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 900 (1178)
T ss_pred CHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCch
Confidence 335666665554332 245679999999999999999999877654
|
|
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.99 E-value=0.0029 Score=62.23 Aligned_cols=177 Identities=14% Similarity=0.053 Sum_probs=101.3
Q ss_pred CCcEEEEecCCCCChHHHHHHhhCCCccEEEec----ccchhhhhccCceeEeecCChhh---HHHHHHHhh----cC--
Q 043920 300 QTGVLFVCSHRTLLDPIFLSVALGRPIPTVTYS----VSRLSEIISPIKAVRLSRDRATD---ASTIKKLLE----EG-- 366 (504)
Q Consensus 300 ~~~~viVaNH~S~lD~~~l~~~~~~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~~~---~~~~~~~l~----~G-- 366 (504)
+.++=.++||.|+.|..+-+.+. -..|+++. ++..+..-..-|.+.+.|..... +......++ +-
T Consensus 185 d~t~edc~l~vs~gql~lpm~a~--l~eF~~~~r~lkL~~~gl~k~ld~y~~var~~kg~~igi~efa~~l~vpvsd~l~ 262 (412)
T KOG4666|consen 185 DRTGEDCSLHVSYGQLLLPMSAS--LPEFVAKRRVLKLPLVGLIKKLDGYVYVAREAKGPDIGIVEFAVNLRVPVSDKLA 262 (412)
T ss_pred CCchHHHHHHHhhccEecccccc--hHHHHHHHhccCCChHHHHHHHhhHHHHHHhccCCCcceeEeeeeeecchhhhhh
Confidence 55677889999999987655432 01344443 45555433445666666654321 111111111 11
Q ss_pred -CEEEEcCceeeCCCccccccccccccCCeEEEEEEEccccCccccccCCCCCCcccccccc---CCCeEEEEEecCcCC
Q 043920 367 -DLAMCPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPFYFFMN---PCPAYEVTFLNKLPM 442 (504)
Q Consensus 367 -~l~IFPEGTrs~~~~l~~Fk~G~~~~~~pIvPV~i~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~v~V~~l~pi~~ 442 (504)
-..+|||||++++....-|+.+.+-.+-|+.|+.|++...++... ..+...-+.+..+++ --..++|..+-|-.
T Consensus 263 ~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~~i- 340 (412)
T KOG4666|consen 263 PTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLFPSI- 340 (412)
T ss_pred hhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccchhh-
Confidence 357999999999998888888888889999999999955444321 111111122222221 11224444443311
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHhc
Q 043920 443 ELTCGSGKSSHEVANYIQRVIAATLSYESTRFTRKDKYRALA 484 (504)
Q Consensus 443 ~~~~~~~~~~~~la~~v~~~i~~~l~~~~t~~t~~dk~~~~~ 484 (504)
+ ++.+++-.+...++-++..=.+..+..+.-||..+-+
T Consensus 341 ~----q~d~~ki~~~~f~~fa~~~p~~a~~~~~yld~~~~H~ 378 (412)
T KOG4666|consen 341 E----QKDDPKIYASNFRKFAATEPNLALSELGYLDKRIYHA 378 (412)
T ss_pred h----cccCcceeHHHHHHHHHhCchhhhhhhccccchheee
Confidence 1 2566677788888888876555555555556655443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=85.53 E-value=0.52 Score=46.00 Aligned_cols=19 Identities=37% Similarity=0.573 Sum_probs=16.3
Q ss_pred CcceEEEEecCCccccCCC
Q 043920 18 REKHTVVADMDGTLLRGRS 36 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds 36 (504)
+..++++||+||||++.+.
T Consensus 3 ~~~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRN 21 (247)
T ss_pred CCCeEEEEECcCCCcCCCC
Confidence 4678999999999998754
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.14 E-value=0.54 Score=44.92 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=25.7
Q ss_pred HHhhCCCEEE-EecCcHHHHHHHHHhhcCCc-EEEeee
Q 043920 116 VFSSCGKRCV-LTANPRIMVEAFLKDFLAAD-LVLGTE 151 (504)
Q Consensus 116 ~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d-~vigt~ 151 (504)
.++++|+.++ +||=+...++++++. +|++ .+++..
T Consensus 31 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~i~~n 67 (230)
T PRK01158 31 KAEKLGIPVILATGNVLCFARAAAKL-IGTSGPVIAEN 67 (230)
T ss_pred HHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCcEEEec
Confidence 3455787764 899998889999998 8986 344433
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=85.06 E-value=0.55 Score=45.85 Aligned_cols=41 Identities=20% Similarity=0.038 Sum_probs=31.7
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeC----CCCCHHHHhh-cccCeeeC
Q 043920 170 VGNKKADALLKAFGETQPEIGLGD----RQTDIPFMAL-CKEGYLVP 211 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygD----S~~DlpmL~~-a~~~~~Vn 211 (504)
.|-.|..+|+.+. ...-.+|+|| +.||++||+. .-..+.|.
T Consensus 186 ~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 186 QGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 6778999999988 4344679999 7999999997 44444553
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=85.00 E-value=0.55 Score=40.90 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=13.0
Q ss_pred ceEEEEecCCccccC
Q 043920 20 KHTVVADMDGTLLRG 34 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ 34 (504)
+++++||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 478999999999874
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.45 E-value=0.72 Score=45.59 Aligned_cols=35 Identities=3% Similarity=0.073 Sum_probs=26.1
Q ss_pred HHhhCCCEEE-EecCcHHHHHHHHHhhcCCc--EEEeee
Q 043920 116 VFSSCGKRCV-LTANPRIMVEAFLKDFLAAD--LVLGTE 151 (504)
Q Consensus 116 ~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d--~vigt~ 151 (504)
.++++|+.++ +||=+-..+++++++ +|++ .+||..
T Consensus 35 ~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~~~~~I~~N 72 (271)
T PRK03669 35 RLREAQVPVILCSSKTAAEMLPLQQT-LGLQGLPLIAEN 72 (271)
T ss_pred HHHHcCCeEEEEcCCCHHHHHHHHHH-hCCCCCcEEEeC
Confidence 4455797764 899999999999999 8985 255443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=82.96 E-value=0.69 Score=40.26 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=23.8
Q ss_pred HHHHHHhhCCCEE-EEecC-cHHHHHHHHHhhcC
Q 043920 112 ESWRVFSSCGKRC-VLTAN-PRIMVEAFLKDFLA 143 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas-~~~~v~~ia~~~Lg 143 (504)
+.+++++++|..+ |+|++ ...++..+.+. ++
T Consensus 36 e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~ 68 (128)
T TIGR01681 36 DKLQTLKKNGFLLALASYNDDPHVAYELLKI-FE 68 (128)
T ss_pred HHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-cc
Confidence 3455777889776 68998 88888888887 66
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=82.18 E-value=0.8 Score=45.64 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=26.9
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL 146 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~ 146 (504)
++++++++|..+ |+|++.+..++...+. +|++.
T Consensus 154 aL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~ 187 (301)
T TIGR01684 154 SLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDR 187 (301)
T ss_pred HHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCc
Confidence 445677789776 6899999999999999 99874
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=81.74 E-value=7.1 Score=34.59 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=50.1
Q ss_pred HHHHHHhhCCCEE-EEecCcH---------------HHHHHHHHhhcCCcE--EEeeeEEEeCCeeeeeEeCCCCCCchh
Q 043920 112 ESWRVFSSCGKRC-VLTANPR---------------IMVEAFLKDFLAADL--VLGTEIATYKGRATGLVRDPGVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~---------------~~v~~ia~~~Lg~d~--vigt~l~~~~g~~tG~i~g~~~l~g~~ 173 (504)
++++.++++|+.+ |+|.+.+ ..++.+.+. +|++. .+-+.. .+..-.+ + ...
T Consensus 34 ~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~------~~~~~~~--~--~KP 102 (147)
T TIGR01656 34 PALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPH------HPADNCS--C--RKP 102 (147)
T ss_pred HHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCC------CCCCCCC--C--CCC
Confidence 4566788899876 5888763 466777788 88751 111110 0000000 1 122
Q ss_pred HHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCee
Q 043920 174 KADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 174 Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~ 209 (504)
|.+.++..+.+.++ .+.+|||..|+..-+.+|-..+
T Consensus 103 ~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 103 KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 44555555443332 4579999999988888876654
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.55 E-value=9 Score=42.36 Aligned_cols=89 Identities=11% Similarity=0.144 Sum_probs=56.2
Q ss_pred HHhhCCCE-EEEec-CcHHHHHHHHHhh----cCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC-e
Q 043920 116 VFSSCGKR-CVLTA-NPRIMVEAFLKDF----LAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP-E 188 (504)
Q Consensus 116 ~~~~~G~~-vvvSa-s~~~~v~~ia~~~----Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~-~ 188 (504)
.+|.+++. .|++| |.++.++..-.++ .....|+|-+ | ..++|++..+..-...+. .
T Consensus 722 ~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CR----------------c-tPtQKA~v~~llq~~t~krv 784 (1051)
T KOG0210|consen 722 NLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCR----------------C-TPTQKAQVVRLLQKKTGKRV 784 (1051)
T ss_pred HhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEe----------------c-ChhHHHHHHHHHHHhhCceE
Confidence 45555544 46777 4666555544332 1223444433 5 567888776655443343 3
Q ss_pred EEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 189 IGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 189 ~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.|+||+-||+.|...|+-.+-+.. ..+=+++|.
T Consensus 785 c~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 785 CAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred EEEcCCCccchheeecccceeeecccccccchhc
Confidence 489999999999999999886654 555666776
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=81.49 E-value=0.81 Score=41.99 Aligned_cols=68 Identities=18% Similarity=0.058 Sum_probs=32.9
Q ss_pred HHHHHHHhhCCCEE-EEecCc-HHHHHHHHHhhcCCc--EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC
Q 043920 111 PESWRVFSSCGKRC-VLTANP-RIMVEAFLKDFLAAD--LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ 186 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~-~~~v~~ia~~~Lg~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~ 186 (504)
++++++++++|..+ ++|-+. ..+++.+.+. |+++ ..-+..+ ...+...-.+ -..|...+++.....+
T Consensus 51 ~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~---~~~F~~~eI~-----~gsK~~Hf~~i~~~tg 121 (169)
T PF12689_consen 51 PEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPL---IEYFDYLEIY-----PGSKTTHFRRIHRKTG 121 (169)
T ss_dssp HHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C-------------CCECEEEES-----SS-HHHHHHHHHHHH-
T ss_pred HHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccc---hhhcchhhee-----cCchHHHHHHHHHhcC
Confidence 34566888899877 567443 3588888888 8887 1111111 1223332222 2268888887765545
Q ss_pred C
Q 043920 187 P 187 (504)
Q Consensus 187 ~ 187 (504)
+
T Consensus 122 I 122 (169)
T PF12689_consen 122 I 122 (169)
T ss_dssp -
T ss_pred C
Confidence 4
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=80.69 E-value=7.2 Score=35.81 Aligned_cols=25 Identities=16% Similarity=0.077 Sum_probs=20.2
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.+.+|||.+|+..-+.+|-..+...
T Consensus 123 ~~~VgDs~~Di~~A~~aG~~~i~v~ 147 (181)
T PRK08942 123 SPMVGDSLRDLQAAAAAGVTPVLVR 147 (181)
T ss_pred EEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 5689999999999999997655443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 504 | |||
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-09
Identities = 28/208 (13%), Positives = 52/208 (25%), Gaps = 19/208 (9%)
Query: 26 DMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLI---F 82
D+D TLL S + +A G L+ +
Sbjct: 10 DLDHTLLPLDSDY-QWADFLARTGRAGDPAEARRR--NDDLMERYNRGELTAEQAAEFML 66
Query: 83 ASFVGLRVTDIESVARAVLPKFYASDLHPESWRVFSSC---GKRCVL-TANPRIMVEAFL 138
++ + + L ++ V G C L TA + +
Sbjct: 67 GLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAP-I 125
Query: 139 KDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADAL---LKAFGETQPE----IGL 191
++ T+ GR TG + K + L G +
Sbjct: 126 ARAFGVQHLIATDPEYRDGRYTGRIEGT-PSFREGKVVRVNQWLAGMGLALGDFAESYFY 184
Query: 192 GDRQTDIPFMALCKEGYLVPSKPEVKAV 219
D D+P + P ++ +
Sbjct: 185 SDSVNDVPLLEAVTRPIAANPSPGLREI 212
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 79/513 (15%), Positives = 142/513 (27%), Gaps = 158/513 (30%)
Query: 77 IQVLIFASFVG-LRVTDIESVARAVLPKFYASDL----HPES--WRVFSSCGKRCVLTAN 129
+ V +FV D++ + +++L K + S R+F L +
Sbjct: 22 LSVFE-DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW------TLLSK 74
Query: 130 PRIMVEAFLKDFLAADL-VLGTEIAT-----------YKGRATGLVRDPGVLV-GN---- 172
MV+ F+++ L + L + I T Y + L D V N
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 173 KKADALLKAFGETQPE--------IGLG------------DRQTDIPF------MALCKE 206
+ L +A E +P +G G Q + F + C
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 207 G-----------YLVPSKPEVKAVTCDKLPKPIIFHDGRLVR----KPAPLMALLII--L 249
Y + ++ + I L R KP LL++ +
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE-NCLLVLLNV 253
Query: 250 WTPIGFFLACLRIAAGALLPMSTVYYAFWALGVRVIV----KGTPPPAAKKSTGQTGVLF 305
+ AF L ++++ K S T +
Sbjct: 254 QNA-------------------KAWNAF-NLSCKILLTTRFKQV---TDFLSAATTTHIS 290
Query: 306 VCSHRTLLDP-----IFLSVALGRP--IPTVTYSVSRLSEIISPIKAVRLSRDRAT---- 354
+ H L P + L RP +P + + +S I + AT
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR--RLSIIAE-SIRDGLATWDNW 347
Query: 355 ---DASTIKKLLEEGDLAMCPEGTTCREPFLLRFSALFAELT----DELVPVAMVNRMSM 407
+ + ++E EP R +F L+ +P ++ +S+
Sbjct: 348 KHVNCDKLTTIIE-----SSLN---VLEPAEYR--KMFDRLSVFPPSAHIP-TIL--LSL 394
Query: 408 FHGTTARGWKGMDPF--YFFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAA 465
W + +N Y + + K P E T S I +
Sbjct: 395 I-------WFDVIKSDVMVVVNKLHKY--SLVEKQPKESTI----SIPS----IYLELKV 437
Query: 466 TLSYESTRFTRK--DKYRALAGNDGTVVEKPFI 496
L R D Y D + P++
Sbjct: 438 KLE-NEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 504 | |||
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.94 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.87 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 99.87 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.84 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.64 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.63 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.61 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.5 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.48 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.43 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.33 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.25 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.16 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.07 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.03 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.0 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.89 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.88 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.87 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.87 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.85 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.85 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.84 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.81 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.8 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.79 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.77 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.76 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.76 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.75 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.73 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.72 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.7 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.7 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.7 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.7 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.69 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.68 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.68 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.66 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.65 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.63 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.63 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 98.62 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.59 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.57 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.56 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.54 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.53 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.53 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.53 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.52 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.52 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.52 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.52 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.51 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.51 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.51 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.48 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.47 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.47 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.45 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.43 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.42 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.41 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.4 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.38 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.37 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.37 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.37 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.36 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.35 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.31 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.3 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.28 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.27 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.24 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.24 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 98.2 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.19 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.14 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.14 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 98.12 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 98.1 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.08 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.08 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.02 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.99 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.91 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 97.9 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 97.03 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.73 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.71 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.63 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 97.59 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 97.57 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.54 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 97.49 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.43 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 97.42 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 97.39 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.37 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.25 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.24 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.2 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.14 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.09 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.99 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 96.85 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.85 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.76 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.65 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.55 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 96.46 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.18 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 96.08 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.02 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.01 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 95.94 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 95.85 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.7 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.26 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 95.18 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 95.1 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 95.09 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.02 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 94.67 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 94.48 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 94.44 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 94.37 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 94.2 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 94.05 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 93.89 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 93.48 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 93.39 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 93.37 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 93.16 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 92.86 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 92.49 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 92.15 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 91.63 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 90.39 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 90.1 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 89.8 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 89.44 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 89.12 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 88.15 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 87.53 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 87.46 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 87.14 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 85.61 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 83.78 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 83.77 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 83.31 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 83.2 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 82.42 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 82.18 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 82.06 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 82.01 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 81.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 80.7 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 80.33 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 80.15 |
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=216.68 Aligned_cols=211 Identities=13% Similarity=0.137 Sum_probs=160.1
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcch-HHHHHHHHhhHHHHHhhccccccH-HHHHHHHHHhcCCCHHHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGI-LRLLFLLLASPIAGLLYYLVSESA-GIQVLIFASFVGLRVTDIESV 96 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~l~~~ 96 (504)
..++++||+||||++.++...|..+.... +.. ..... .......+..+..+..+. .+.+.....+.|.+.++++++
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSDYQWADFLART-GRAGDPAEA-RRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAW 80 (232)
T ss_dssp CCEEEEECCBTTTBSSCHHHHHHHHHHHT-TSSSSHHHH-HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCcEEEEeCCCCCcCCchHHHHHHHHHHc-CCCCccHHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHHH
Confidence 35799999999999999877665544321 111 01100 000111111121112222 144556667889999999999
Q ss_pred HHHHcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCch
Q 043920 97 ARAVLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGN 172 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~ 172 (504)
.++++.+.+.+.++|++.+ +++++|..+ |+|++++.+++++++. +|+++++++.+.+++|.++|++.+++| .+.
T Consensus 81 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~ 158 (232)
T 3fvv_A 81 HEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPS-FRE 158 (232)
T ss_dssp HHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCS-STH
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCC-cch
Confidence 9998887766678888765 678899776 6899999999999999 999999999999999999999998877 899
Q ss_pred hHHHHHHHHhCCCC---C----eEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-eeCCC
Q 043920 173 KKADALLKAFGETQ---P----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FHDGR 234 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~---~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~~r 234 (504)
.|.+.+++++.+.+ + .++||||.+|++|++.|+.+++|||++++++.|+ ++||+|+ |...|
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~-~~~w~~~~~~~~~ 227 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQ-ARGWQVIDLFDHL 227 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHH-HHTCEEECCC---
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHH-HCCCcEeehhhhh
Confidence 99999988765444 2 5689999999999999999999999999999999 9999999 86544
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8e-23 Score=203.30 Aligned_cols=201 Identities=13% Similarity=0.061 Sum_probs=138.2
Q ss_pred HhHHHHhhhhcceEEEEcC-------CCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhCC-------CccEEEec---
Q 043920 270 MSTVYYAFWALGVRVIVKG-------TPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALGR-------PIPTVTYS--- 332 (504)
Q Consensus 270 ~~~~~~~~~~~Gi~v~v~G-------~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~~-------~~~~v~k~--- 332 (504)
..|.+.++...|++ |.| .|+++ .++++|++|||||.+|++++..++++ ++.||+|+
T Consensus 99 ~~~ir~li~~~~s~--V~G~e~~~~~~E~l~-----~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~ 171 (367)
T 1iuq_A 99 QNYIRPLIDFGNSF--VGNLSLFKDIEEKLQ-----QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVL 171 (367)
T ss_dssp HHHHGGGBCGGGCE--EECHHHHHHHHHHHH-----TTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHH
T ss_pred HHHHHHHHhhcCCE--eecchhhhhHHhhcc-----CCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhh
Confidence 34677777777777 777 77776 67899999999999999999999975 79999997
Q ss_pred -ccchhhhh--ccCceeEe----e------cCChhh----HHHHHHHhhc-C-CEEEEcCceeeCC----Cc--cccccc
Q 043920 333 -VSRLSEII--SPIKAVRL----S------RDRATD----ASTIKKLLEE-G-DLAMCPEGTTCRE----PF--LLRFSA 387 (504)
Q Consensus 333 -~~~~~~~~--~~~g~i~i----~------R~~~~~----~~~~~~~l~~-G-~l~IFPEGTrs~~----~~--l~~Fk~ 387 (504)
.|...++- ..+++|+. + |++.+. ++++.+.|++ | +++|||||||+++ +. ..+||+
T Consensus 172 ~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~ 251 (367)
T 1iuq_A 172 ADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDA 251 (367)
T ss_dssp HCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCH
T ss_pred cCccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccc
Confidence 44443331 22457775 4 444322 5667778888 5 8999999999985 44 455999
Q ss_pred c-c-------cccCCe--EEEEEEEccccCcccccc-CCCCCCccccccccCCCeEEEEEecCcCCccccCCC----CCH
Q 043920 388 L-F-------AELTDE--LVPVAMVNRMSMFHGTTA-RGWKGMDPFYFFMNPCPAYEVTFLNKLPMELTCGSG----KSS 452 (504)
Q Consensus 388 G-~-------~~~~~p--IvPV~i~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~v~V~~l~pi~~~~~~~~~----~~~ 452 (504)
| + .++++| |+||+|.++..+++..+. .... . ....++++ |.|+|++||+++++.... +..
T Consensus 252 gs~~~~~~LA~ksg~P~hIvPvaI~t~~imppp~~ve~~~g--~--~r~i~~~~-V~v~ig~pI~~~~l~~~~e~~~e~~ 326 (367)
T 1iuq_A 252 SSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIG--E--KRVIAFNG-AGLSVAPEISFEEIAATHKNPEEVR 326 (367)
T ss_dssp HHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC--------------CCCCCBC-CEEEECCCCCHHHHHHTSSSHHHHH
T ss_pred hhhhHHHHHHHHcCCCceEEEEEEEeccccCCccccccccc--c--cceeeccc-EEEEECCccchhhccccccchHHHH
Confidence 9 4 357999 999999965545443210 0000 0 02345566 999999999987652112 224
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCCHHHHHHHhcCCCcccc
Q 043920 453 HEVANYIQRVIAATLSYESTRFTRKDKYRALAGNDGTVV 491 (504)
Q Consensus 453 ~~la~~v~~~i~~~l~~~~t~~t~~dk~~~~~~~~~~~~ 491 (504)
+++++.+++.|++.+ +....+..|+.|--.
T Consensus 327 ~~l~e~v~~~I~~~y---------~~l~~~i~~~~~~~~ 356 (367)
T 1iuq_A 327 EAYSKALFDSVAMQY---------NVLKTAISGKQGLGA 356 (367)
T ss_dssp HHHHHHHHHHHHHHH---------HHHHHHTTTCCGGGG
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHhccccccc
Confidence 568999999999987 233446667766443
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=202.94 Aligned_cols=195 Identities=16% Similarity=0.155 Sum_probs=136.1
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHH--HHHh----------hHHHHHhhcccccc-HHHHHHHHHHh
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLF--LLLA----------SPIAGLLYYLVSES-AGIQVLIFASF 85 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~--~~~~----------~p~~~~~~~~~~~~-~~~~~~~~~~~ 85 (504)
+.++||||+||||+.+||...++.+...+ +...+... .+.. .......+.+...+ ......+..++
T Consensus 24 ~~riAVFD~DgTLi~~D~~e~~~~y~~~~-~~~~~~~~~~~l~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 102 (327)
T 4as2_A 24 KGAYAVFDMDNTSYRYDLEESLLPYLEMK-GVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVF 102 (327)
T ss_dssp SSCEEEECCBTTTEESCHHHHHHHHHHHT-TSSCTTTSCGGGCCSCCCCCSSCCCCHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCeeCCCcHHHHHHHHHHh-CCcCHHHhhhhhcCccccccHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 45899999999999999988777654322 11110000 0000 00000001111111 11345666789
Q ss_pred cCCCHHHHHHHHHHHcchh------------------hhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhh--
Q 043920 86 VGLRVTDIESVARAVLPKF------------------YASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDF-- 141 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~------------------~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~-- 141 (504)
+|++.+|+++++++++... +.++++|++.+ .|+++|+.| |||||++++|+|+|+..
T Consensus 103 aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~ 182 (327)
T 4as2_A 103 SGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRY 182 (327)
T ss_dssp TTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGG
T ss_pred cCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhccc
Confidence 9999999999999998532 23478998876 789999877 69999999999999872
Q ss_pred -cCC--cEEEeeeEEEeCC---------------e----------eeeeEeCCCCCCchhHHHHHHHHhCC-CCCeEEEe
Q 043920 142 -LAA--DLVLGTEIATYKG---------------R----------ATGLVRDPGVLVGNKKADALLKAFGE-TQPEIGLG 192 (504)
Q Consensus 142 -Lg~--d~vigt~l~~~~g---------------~----------~tG~i~g~~~l~g~~Kv~~l~~~~~~-~~~~~ayg 192 (504)
.|| ++|||++++++++ + +|+.+.++.| +|++|+..+++++.. .++.+++|
T Consensus 183 ~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~-~~~GK~~~I~~~i~~g~~Pi~a~G 261 (327)
T 4as2_A 183 GYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPAT-WMAGKQAAILTYIDRWKRPILVAG 261 (327)
T ss_dssp SCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCS-STHHHHHHHHHHTCSSCCCSEEEE
T ss_pred ccCCCHHHeEeeeeeeecccccccccccccccccccccccccccccccccccccc-ccCccHHHHHHHHhhCCCCeEEec
Confidence 366 7999999988643 2 4677788877 999999999999832 24577999
Q ss_pred CC-CCCHHHHhh----cccCeeeCCCcc
Q 043920 193 DR-QTDIPFMAL----CKEGYLVPSKPE 215 (504)
Q Consensus 193 DS-~~DlpmL~~----a~~~~~Vnp~~~ 215 (504)
|| .+|.+||.. .+...+||.+.+
T Consensus 262 ns~dgD~~ML~~~~~~~~~~L~in~~~~ 289 (327)
T 4as2_A 262 DTPDSDGYMLFNGTAENGVHLWVNRKAK 289 (327)
T ss_dssp SCHHHHHHHHHHTSCTTCEEEEECCCHH
T ss_pred CCCCCCHHHHhccccCCCeEEEEecCCc
Confidence 99 699999965 357778998654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-21 Score=195.06 Aligned_cols=146 Identities=12% Similarity=0.175 Sum_probs=118.3
Q ss_pred HHhcCCCHHHHHHHHHHHcchhhhc---------------------------ccCHHHHH---HHhhCCCEE-EEecCcH
Q 043920 83 ASFVGLRVTDIESVARAVLPKFYAS---------------------------DLHPESWR---VFSSCGKRC-VLTANPR 131 (504)
Q Consensus 83 ~~~~G~~~~~l~~~~~~~~~~~~~~---------------------------~~~~~~~~---~~~~~G~~v-vvSas~~ 131 (504)
..+.|++.+|+++++++++.....+ +++|++.+ .||++|+.| |||||++
T Consensus 169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~ 248 (385)
T 4gxt_A 169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFI 248 (385)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcH
Confidence 3579999999999999987643322 26898876 788999777 6999999
Q ss_pred HHHHHHHHhhcCC------cEEEeeeEEEe-CCeeeeeEeCC-CCCCchhHHHHHHHHhCCC---CCeEEEeCCCCCHHH
Q 043920 132 IMVEAFLKDFLAA------DLVLGTEIATY-KGRATGLVRDP-GVLVGNKKADALLKAFGET---QPEIGLGDRQTDIPF 200 (504)
Q Consensus 132 ~~v~~ia~~~Lg~------d~vigt~l~~~-~g~~tG~i~g~-~~l~g~~Kv~~l~~~~~~~---~~~~aygDS~~Dlpm 200 (504)
.+++|+|++ +|+ ++|+|++++++ ||++||++.+. +...|++|+++|++++..+ +..+|||||.+|+||
T Consensus 249 ~~v~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~M 327 (385)
T 4gxt_A 249 DIVRAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAM 327 (385)
T ss_dssp HHHHHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHH
T ss_pred HHHHHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHH
Confidence 999999999 875 68999999996 89999999873 2338999999999987542 346799999999999
Q ss_pred Hhhccc---CeeeCCCc-----chhccccccCCCceee
Q 043920 201 MALCKE---GYLVPSKP-----EVKAVTCDKLPKPIIF 230 (504)
Q Consensus 201 L~~a~~---~~~Vnp~~-----~l~~~A~~~~~W~i~f 230 (504)
|+.+++ .+++|+.. .|+..|. +.+|.++.
T Consensus 328 L~~~~~~~~~liinr~~~~~~~~l~~~a~-~~~~~~~l 364 (385)
T 4gxt_A 328 LKEFDHTDLSLIIHRANSGLIDDLRQKAR-EGSLRYYS 364 (385)
T ss_dssp HHHCTTCSEEEEECCSCCSHHHHHHHHHH-TTCSSEEE
T ss_pred HhcCccCceEEEEcCCcccchHHHHHHHh-ccCCeEEE
Confidence 997544 57788633 5777888 88899874
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=158.11 Aligned_cols=186 Identities=26% Similarity=0.315 Sum_probs=135.7
Q ss_pred CCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHHH
Q 043920 16 IGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDIE 94 (504)
Q Consensus 16 ~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l~ 94 (504)
..+.+++++||+||||++.++. .++.. ..+...... .....+..+..+.. ..+.....+.|.+.+.++
T Consensus 181 ~~~~~k~viFD~DgTLi~~~~~-~~la~---~~g~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 249 (415)
T 3p96_A 181 ERRAKRLIVFDVDSTLVQGEVI-EMLAA---KAGAEGQVA-------AITDAAMRGELDFAQSLQQRVATLAGLPATVID 249 (415)
T ss_dssp TTTCCCEEEECTBTTTBSSCHH-HHHHH---HTTCHHHHH-------HHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHH
T ss_pred cccCCcEEEEcCcccCcCCchH-HHHHH---HcCCcHHHH-------HHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHH
Confidence 3556789999999999999864 22221 111111110 01111111122221 222334567899998888
Q ss_pred HHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCC
Q 043920 95 SVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLV 170 (504)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~ 170 (504)
++.+.+ .++|++ ++.++++|+.+ |+|+++..+++.+++. +|++.++++.+++.+|.+||++.+..+ .
T Consensus 250 ~~~~~~-------~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~-~ 320 (415)
T 3p96_A 250 EVAGQL-------ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPII-D 320 (415)
T ss_dssp HHHHHC-------CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCC-C
T ss_pred HHHHhC-------ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCC-C
Confidence 776654 255555 45788999776 6899999999999999 999999999999999999999998865 7
Q ss_pred chhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 171 GNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
+..|.+.+++.+...++ .+++|||.+|++|++.+|.++++|+++.+++.|.
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad 375 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVAD 375 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCS
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCC
Confidence 88999998887655443 5799999999999999999999999999987776
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=4e-15 Score=149.64 Aligned_cols=187 Identities=14% Similarity=0.123 Sum_probs=133.8
Q ss_pred cCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHH
Q 043920 15 SIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDI 93 (504)
Q Consensus 15 ~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l 93 (504)
...+.+++++||+||||++.++...+.... +...... .....+..+..+.. ........+.|...+.+
T Consensus 103 ~~~~~~kaviFDlDGTLid~~~~~~la~~~----g~~~~~~-------~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i 171 (317)
T 4eze_A 103 QPLPANGIIAFDMDSTFIAEEGVDEIAREL----GMSTQIT-------AITQQAMEGKLDFNASFTRRIGMLKGTPKAVL 171 (317)
T ss_dssp SSCCCSCEEEECTBTTTBSSCHHHHHHHHT----TCHHHHH-------HHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHH
T ss_pred ccCCCCCEEEEcCCCCccCCccHHHHHHHh----CCcHHHH-------HHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHH
Confidence 345578999999999999988753332211 1111110 01111111111211 22233445778888888
Q ss_pred HHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCC
Q 043920 94 ESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVL 169 (504)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l 169 (504)
+++.+++ . ++|++ +++++++|.++ |+|+++..+++.+++. +|++.++++.+.+++|++||++.+..+
T Consensus 172 ~~~~~~~-~------l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~- 242 (317)
T 4eze_A 172 NAVCDRM-T------LSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIM- 242 (317)
T ss_dssp HHHHHTC-C------BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCC-
T ss_pred HHHHhCC-E------ECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccC-
Confidence 7766543 1 45555 55788999776 6899999999999999 999999999999999999999998855
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.+..|.+.+++.+...++ .+++|||.+|+++++.||.++++|+++.++..|.
T Consensus 243 ~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~~~~~~~~~a~ 298 (317)
T 4eze_A 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIH 298 (317)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHHhcC
Confidence 788898888877654332 5689999999999999999999999888887665
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=141.01 Aligned_cols=182 Identities=12% Similarity=0.105 Sum_probs=127.5
Q ss_pred ceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH-HHHHHHHHHhcCCCHHHHHHHHH
Q 043920 20 KHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA-GIQVLIFASFVGLRVTDIESVAR 98 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~l~~~~~ 98 (504)
.++++||+||||++.++...+.... +...... ... . .+.....+. .........+.|.+.++++++.+
T Consensus 4 ~k~vifDlDGTL~~~~~~~~~~~~~----~~~~~~~---~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (217)
T 3m1y_A 4 QKLAVFDFDSTLVNAETIESLARAW----GVFDEVK---TIT-L---KAMNGETDFHKSLILRVSKLKNMPLKLAKEVCE 72 (217)
T ss_dssp CEEEEEECBTTTBSSCHHHHHHHHT----TCHHHHT---TCC-C---C----CCCHHHHHHHHHHTTTTCBHHHHHHHHT
T ss_pred CcEEEEeCCCCCCCchhHHHHHHHc----CchHHHH---HHH-H---HHHcCcCCHHHHHHHHHHHhcCCCHHHHHHHHh
Confidence 5899999999999987744322211 1110000 000 0 000001111 11122334567888888776555
Q ss_pred HHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhH
Q 043920 99 AVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKK 174 (504)
Q Consensus 99 ~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~K 174 (504)
+. .++|++ ++.++++|..+ |+|++++.+++.+.+. +|++..+...+..++|.++|.+.+..+ .+..|
T Consensus 73 ~~-------~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~-~~k~k 143 (217)
T 3m1y_A 73 SL-------PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMM-FSHSK 143 (217)
T ss_dssp TC-------CBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCC-STTHH
T ss_pred cC-------cCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCC-CCCCh
Confidence 41 145544 55788899776 6899999999999999 999999999999999999999988766 78889
Q ss_pred HHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 175 ADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 175 v~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.+.++..+...++ .+++|||.+|++|++.+|.++++|+++++++.|.
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ad 194 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHAT 194 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTTCS
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHhcc
Confidence 9888877544332 5799999999999999999999999999987665
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.2e-13 Score=123.87 Aligned_cols=108 Identities=20% Similarity=0.225 Sum_probs=85.4
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC---
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP--- 187 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~--- 187 (504)
++++.++++|..+ ++|+++...++++.+. +|++.++.+.+...++.++|++....+ .+..|.+.+++.+...++
T Consensus 83 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~K~~~l~~~~~~lgi~~~ 160 (211)
T 1l7m_A 83 ETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVL-KENAKGEILEKIAKIEGINLE 160 (211)
T ss_dssp HHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSC-STTHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCcc-CCccHHHHHHHHHHHcCCCHH
Confidence 4556788899766 5899999999999998 999887776666667778888776544 577898888877654333
Q ss_pred -eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 188 -EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 188 -~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.+++|||.+|++|++.||.++++++.+.++..|.
T Consensus 161 ~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~~~a~ 195 (211)
T 1l7m_A 161 DTVAVGDGANDISMFKKAGLKIAFCAKPILKEKAD 195 (211)
T ss_dssp GEEEEECSGGGHHHHHHCSEEEEESCCHHHHTTCS
T ss_pred HEEEEecChhHHHHHHHCCCEEEECCCHHHHhhcc
Confidence 5699999999999999999999998777765444
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.5e-13 Score=134.78 Aligned_cols=187 Identities=19% Similarity=0.143 Sum_probs=127.3
Q ss_pred cCCCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHH-HHHHHHHHhcCCCHHHH
Q 043920 15 SIGREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAG-IQVLIFASFVGLRVTDI 93 (504)
Q Consensus 15 ~~~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~G~~~~~l 93 (504)
+.-+..++++||+||||++.++........ +.. .... .+...+.....+.. ........+.+.+.+.+
T Consensus 102 ~~i~~~~~viFD~DgTLi~~~~~~~~~~~~----g~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 170 (335)
T 3n28_A 102 PDLTKPGLIVLDMDSTAIQIECIDEIAKLA----GVG-EEVA------EVTERAMQGELDFEQSLRLRVSKLKDAPEQIL 170 (335)
T ss_dssp CCTTSCCEEEECSSCHHHHHHHHHHHHHHH----TCH-HHHH------HHHHHHHTTSSCHHHHHHHHHHTTTTCBTTHH
T ss_pred ccccCCCEEEEcCCCCCcChHHHHHHHHHc----CCc-hHHH------HHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHH
Confidence 344467899999999999954432222111 111 0000 00000111111211 11222334677776665
Q ss_pred HHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCC
Q 043920 94 ESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVL 169 (504)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l 169 (504)
+.+.+.. ..+|++ ++.++++|.++ |+|++...+++.+++. +|++.++++.+++.+|.+||.+.+..+
T Consensus 171 ~~~~~~~-------~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~- 241 (335)
T 3n28_A 171 SQVRETL-------PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVV- 241 (335)
T ss_dssp HHHHTTC-------CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCC-
T ss_pred HHHHHhC-------CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeeccccc-
Confidence 5443321 145554 55788899877 5899999999999999 999999999999999999999998754
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.+..|.+.+++.+...++ .+++|||.+|++|++.||.++++|+++.++..|.
T Consensus 242 ~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~a~ 297 (335)
T 3n28_A 242 SAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQ 297 (335)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTTSS
T ss_pred ChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhhCC
Confidence 788898888877554332 5799999999999999999999999998886665
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.43 E-value=9.5e-13 Score=121.13 Aligned_cols=119 Identities=15% Similarity=0.210 Sum_probs=91.3
Q ss_pred HHHHHhcCCCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEe
Q 043920 80 LIFASFVGLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATY 155 (504)
Q Consensus 80 ~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~ 155 (504)
.....+.|.+.++++++.+++ ..+|++ ++.++++|..+ |+|+++...++.+ +. +|++.+ +..+...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~-~~~~~~~ 127 (201)
T 4ap9_A 58 KRVGLIRGIDEGTFLRTREKV-------NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFM-ANRAIFE 127 (201)
T ss_dssp HHHHHTTTCBHHHHHHGGGGC-------CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEE-EEEEEEE
T ss_pred HHHHHhcCCCHHHHHHHHHhC-------CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhh-eeeEEee
Confidence 344567788888776544332 245655 45778899776 5899999999999 88 999888 8888878
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcc
Q 043920 156 KGRATGLVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPE 215 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~ 215 (504)
++.++| . ++ ....|...++++ ...-.+++|||.+|++|++.||.++++++...
T Consensus 128 ~~~~~~--~--~~-~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~ 180 (201)
T 4ap9_A 128 DGKFQG--I--RL-RFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP 180 (201)
T ss_dssp TTEEEE--E--EC-CSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT
T ss_pred CCceEC--C--cC-CccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc
Confidence 888888 2 23 455699999887 33346799999999999999999999987665
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-11 Score=114.69 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC--cEEEeeeEEEe-CCeeee
Q 043920 89 RVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA--DLVLGTEIATY-KGRATG 161 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~--d~vigt~l~~~-~g~~tG 161 (504)
..+++.++.+++.+. .++|++ ++.++++|..+ |+|+++..+++.+++. +|+ +.++++++.+. +|.+++
T Consensus 67 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
T 3kd3_A 67 TKQSIKEFSNKYCPN----LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKE 141 (219)
T ss_dssp BHHHHHHHHHHHTTT----TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEE
T ss_pred CHHHHHHHHHhhccc----cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceec
Confidence 456666555554332 245544 55788899776 6899999999999999 998 66888888774 677777
Q ss_pred eEeCCCCCCchhHHHHHHHHhCCCC-CeEEEeCCCCCHHHHhh
Q 043920 162 LVRDPGVLVGNKKADALLKAFGETQ-PEIGLGDRQTDIPFMAL 203 (504)
Q Consensus 162 ~i~g~~~l~g~~Kv~~l~~~~~~~~-~~~aygDS~~DlpmL~~ 203 (504)
+....+ ..+.|.+++.+.++... -.+++|||.+|++|++.
T Consensus 142 -~~~~~~-~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~ 182 (219)
T 3kd3_A 142 -LDNSNG-ACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEK 182 (219)
T ss_dssp -EECTTS-TTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHH
T ss_pred -cCCCCC-CcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhC
Confidence 444444 56678999998876432 35699999999999975
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=114.86 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=77.2
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhc-CCcEEEeeeEEEeCCeeeeeEeCCC---CC--CchhHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFL-AADLVLGTEIATYKGRATGLVRDPG---VL--VGNKKADAL 178 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~L-g~d~vigt~l~~~~g~~tG~i~g~~---~l--~g~~Kv~~l 178 (504)
++|++.+ .++++|..+ |+|+++..+++.+++. + ++|.+++++....++++++.+..++ +. .|.+|++++
T Consensus 78 ~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~-l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~~~~ 156 (236)
T 2fea_A 78 IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVI 156 (236)
T ss_dssp BCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHH
T ss_pred CCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhc-CCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHHHHH
Confidence 5666644 777899766 6999999999999885 4 6688999998777888888864442 21 267899999
Q ss_pred HHHhCCCCCeEEEeCCCCCHHHHhhcccCeee
Q 043920 179 LKAFGETQPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 179 ~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
+++--...-.+++|||.+|+++.+.+|.+++.
T Consensus 157 ~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 157 HELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp HHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred HHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence 88622223356899999999999999998763
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.16 E-value=7.4e-10 Score=102.83 Aligned_cols=122 Identities=15% Similarity=0.153 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHHcchhhhcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEE-eCCeeee
Q 043920 87 GLRVTDIESVARAVLPKFYASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIAT-YKGRATG 161 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~-~~g~~tG 161 (504)
|.+.++++++. .. -..+|++. +.++++ ..+ |+|++++..++.+++. +|++..+++.+.. .++.++|
T Consensus 55 ~~~~~~~~~~~----~~---~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~ 125 (206)
T 1rku_A 55 GLKLGDIQEVI----AT---LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVG 125 (206)
T ss_dssp TCCHHHHHHHH----TT---CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEE
T ss_pred CCCHHHHHHHH----Hh---cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEe
Confidence 56666665432 21 12456554 466777 776 5899999999999999 9998888777766 3566666
Q ss_pred eEeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 162 LVRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 162 ~i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
.... ..+.|...++++-....-.+++|||.+|+++++.+|.++++++...++..+.
T Consensus 126 ~~~p----~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~ 181 (206)
T 1rku_A 126 YQLR----QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 181 (206)
T ss_dssp EECC----SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCT
T ss_pred eecC----CCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHh
Confidence 5522 3467888888863322335699999999999999999999988777765443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.07 E-value=8e-10 Score=101.86 Aligned_cols=108 Identities=11% Similarity=-0.028 Sum_probs=64.8
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.+|++.+ .++++| .+ |+|+++...++.+.+. +|++..+ +..+++.-.+... ...+-.+.+.+.++.
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f-------~~~~~~~~~~~~K-p~~~~~~~~~~~~~~ 156 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFL-------LAFFTSSALGVMK-PNPAMYRLGLTLAQV 156 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTC-------SCEEEHHHHSCCT-TCHHHHHHHHHHHTC
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhc-------ceEEeecccCCCC-CCHHHHHHHHHHcCC
Confidence 5676655 667788 76 5899999999999998 8864221 1111111111100 011222233333443
Q ss_pred C-CCeEEEeCCCCCHHHHhhcccC-eeeCCCcchhccccccCCCc
Q 043920 185 T-QPEIGLGDRQTDIPFMALCKEG-YLVPSKPEVKAVTCDKLPKP 227 (504)
Q Consensus 185 ~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~~l~~~A~~~~~W~ 227 (504)
. .-.+++|||.+|+++.+.+|-. +.|+....++...+ +.||+
T Consensus 157 ~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~-~~g~~ 200 (200)
T 3cnh_A 157 RPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELA-ALGVR 200 (200)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHH-HTTCC
T ss_pred CHHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHH-HhccC
Confidence 2 2257899999999999999955 45676655555555 56664
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.1e-10 Score=104.90 Aligned_cols=103 Identities=16% Similarity=0.145 Sum_probs=76.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc--EEEeeeEEEe-CCeeeeeEeCC-CCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD--LVLGTEIATY-KGRATGLVRDP-GVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d--~vigt~l~~~-~g~~tG~i~g~-~~l~g~~Kv~~l~~ 180 (504)
++|++ ++.++++|..+ |+|+++...++.+++. +|++ +++++.+.+. +|.++|.-.+. .| .+..|.+.++.
T Consensus 87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~Kp~~~~~ 164 (225)
T 1nnl_A 87 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTA-ESGGKGKVIKL 164 (225)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGG-STTHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCccc-CCCchHHHHHH
Confidence 55655 45778899776 6899999999999999 9996 5888887664 67777754332 12 34578877766
Q ss_pred HhCCC--CCeEEEeCCCCCHHHHhhcccCeeeCCC
Q 043920 181 AFGET--QPEIGLGDRQTDIPFMALCKEGYLVPSK 213 (504)
Q Consensus 181 ~~~~~--~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 213 (504)
..... .-.+++|||.+|+++.+.+|-.++++..
T Consensus 165 ~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~ 199 (225)
T 1nnl_A 165 LKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGN 199 (225)
T ss_dssp HHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSS
T ss_pred HHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCc
Confidence 54332 2367999999999999999997777653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.00 E-value=9.7e-11 Score=107.18 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=67.5
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----P 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~ 187 (504)
++++++++|..+ |+|++++..++.+++. +|++ ++.. ...|.+.+++++...+ -
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~~~--------------------~~~k~~~l~~~~~~~~~~~~~ 104 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VLHG--------------------IDRKDLALKQWCEEQGIAPER 104 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EEES--------------------CSCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eEeC--------------------CCChHHHHHHHHHHcCCCHHH
Confidence 677889999876 6899999999999999 9998 3331 1247777776654432 2
Q ss_pred eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.+++|||.+|++|++.|+.++++ |+++.++..|.
T Consensus 105 ~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad 139 (176)
T 3mmz_A 105 VLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAAR 139 (176)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSS
T ss_pred EEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCC
Confidence 56899999999999999999999 56666766555
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.8e-09 Score=107.38 Aligned_cols=108 Identities=10% Similarity=0.028 Sum_probs=73.3
Q ss_pred HHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC-cEEEeeeEEEe----------------CCeee------------
Q 043920 111 PESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA-DLVLGTEIATY----------------KGRAT------------ 160 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-d~vigt~l~~~----------------~g~~t------------ 160 (504)
.++++.+++ |..+ ++|++...+++.+++. +++ +.+.++.+..+ ++.++
T Consensus 109 ~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l~~~~~ 186 (332)
T 1y8a_A 109 EKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKLDE 186 (332)
T ss_dssp HHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHHHHHHH
Confidence 455667888 9765 6899988899999988 887 66666543321 11111
Q ss_pred -------eeEeC--CCCCCchhHHHHHHHHhCCC--CCeEEEeCCCCCHHHHhhc----ccCeeeCCCcchhcccc
Q 043920 161 -------GLVRD--PGVLVGNKKADALLKAFGET--QPEIGLGDRQTDIPFMALC----KEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 161 -------G~i~g--~~~l~g~~Kv~~l~~~~~~~--~~~~aygDS~~DlpmL~~a----~~~~~Vnp~~~l~~~A~ 221 (504)
+.+.. ..+ .|..|...++..-.+. ...+++|||.||++||+.| +.++++|+.+.++..|.
T Consensus 187 ~~~~s~~~~~~e~ii~~-~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vamna~~~lk~~Ad 261 (332)
T 1y8a_A 187 LFSRSEVRKIVESVKAV-GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 261 (332)
T ss_dssp HHHSHHHHHHHHTCBCC-CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHhhcCCCceeeEEecC-CCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEecCCHHHHhhCc
Confidence 11110 112 4677888887442221 2257999999999999999 99999988888887665
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.88 E-value=7.4e-09 Score=102.55 Aligned_cols=118 Identities=12% Similarity=0.122 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHHcchhhhcccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCe
Q 043920 87 GLRVTDIESVARAVLPKFYASDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGR 158 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~ 158 (504)
|+..+.+.+..++.- -.++| ++++.++++|..+ ++||+....+++++++ +|++ ++++..+.++|+.
T Consensus 125 gl~~~~~~~~v~~~~-----i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~ 198 (297)
T 4fe3_A 125 GIPKAKLKEIVADSD-----VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENG 198 (297)
T ss_dssp TCBGGGHHHHHHTSC-----CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTS
T ss_pred CccHHHHHHHHHhcC-----CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccc
Confidence 455555544443321 12444 4455888999665 6899999999999999 9974 5899999999888
Q ss_pred eeeeEeCCCCCCchhHHH------HHHHHhCCCCCeEEEeCCCCCHHHHh---hcccCeeeC
Q 043920 159 ATGLVRDPGVLVGNKKAD------ALLKAFGETQPEIGLGDRQTDIPFMA---LCKEGYLVP 211 (504)
Q Consensus 159 ~tG~i~g~~~l~g~~Kv~------~l~~~~~~~~~~~aygDS~~DlpmL~---~a~~~~~Vn 211 (504)
.++.+.++ +.....|.. .+.+........++.|||.||+||++ .++..+++.
T Consensus 199 ~~~~~~~~-~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG 259 (297)
T 4fe3_A 199 VLKGFKGE-LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG 259 (297)
T ss_dssp BEEEECSS-CCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred eeEecccc-ccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence 89888876 324444433 33343333344568999999999965 666666655
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=7.1e-09 Score=101.18 Aligned_cols=117 Identities=13% Similarity=0.023 Sum_probs=71.7
Q ss_pred cCCCHHHHHHHHHHHcchhhhcccCHHHHH---HHhhCCC--EE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEe
Q 043920 86 VGLRVTDIESVARAVLPKFYASDLHPESWR---VFSSCGK--RC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATY 155 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~--~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~ 155 (504)
.|.+.+++.+...++.+..-.-..+|++.+ .++++|. .+ |+|++....++.+.+. +|++ .+++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~---- 194 (282)
T 3nuq_A 120 HKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCD---- 194 (282)
T ss_dssp TSSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCC----
T ss_pred cCCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEec----
Confidence 366777776655554421111235666644 7778998 87 5899999999999998 8874 333322
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHHHH---hCCC--CCeEEEeCCCCCHHHHhhcccC-eeeCCCc
Q 043920 156 KGRATGLVRDPGVLVGNKKADALLKA---FGET--QPEIGLGDRQTDIPFMALCKEG-YLVPSKP 214 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~--~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~ 214 (504)
..+.....+..|.+.++.. +|.. .-.+++|||.+|+.|.+.+|-. .+.+..+
T Consensus 195 -------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~ 252 (282)
T 3nuq_A 195 -------YSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVEN 252 (282)
T ss_dssp -------CSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSC
T ss_pred -------cCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCC
Confidence 1111111233455555443 4433 2357999999999999999994 3344433
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.9e-09 Score=100.56 Aligned_cols=84 Identities=20% Similarity=0.221 Sum_probs=55.7
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|..+ |+|++....++.+.+. +|++ .+++++. +..+..|.+.++.
T Consensus 105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~---------------~~~~kp~~~~~~~ 168 (237)
T 4ex6_A 105 LYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAEL-TGLDTRLTVIAGDDS---------------VERGKPHPDMALH 168 (237)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HTGGGTCSEEECTTT---------------SSSCTTSSHHHHH
T ss_pred cCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCchhheeeEEeCCC---------------CCCCCCCHHHHHH
Confidence 45555 44778899776 6899999999999998 8864 3333221 1122334444444
Q ss_pred H---hCCC-CCeEEEeCCCCCHHHHhhcccCe
Q 043920 181 A---FGET-QPEIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~---~~~~-~~~~aygDS~~DlpmL~~a~~~~ 208 (504)
. ++.. .-.+++|||.+|++|++.+|...
T Consensus 169 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 200 (237)
T 4ex6_A 169 VARGLGIPPERCVVIGDGVPDAEMGRAAGMTV 200 (237)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeE
Confidence 3 3322 12579999999999999999844
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-08 Score=93.82 Aligned_cols=102 Identities=5% Similarity=-0.039 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeee
Q 043920 89 RVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRAT 160 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~t 160 (504)
+.+..+.+.+.+ . ....+|++ ++.++++|..+ ++|++....++.+.+. +|++ .+++++.
T Consensus 81 ~~~~~~~~~~~~-~---~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-------- 147 (230)
T 3um9_A 81 DADGEAHLCSEY-L---SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDE-------- 147 (230)
T ss_dssp CHHHHHHHHHHT-T---SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGG--------
T ss_pred CHHHHHHHHHHH-h---cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhh--------
Confidence 555555544443 1 12244555 45778899776 5899999999999998 8863 3333321
Q ss_pred eeEeCCCCCCchhHHHHHHHH---hCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 161 GLVRDPGVLVGNKKADALLKA---FGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 161 G~i~g~~~l~g~~Kv~~l~~~---~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
.+ .+..|.+.++.. ++.. .-.+++|||.+|+.|.+.+|..++.
T Consensus 148 ---~~----~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 148 ---VR----LFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCW 194 (230)
T ss_dssp ---TT----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ---cc----cCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 11 222234444433 3422 2257999999999999999997655
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.84 E-value=9e-09 Score=96.87 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=57.5
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhH---HHHHHHHhC
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKK---ADALLKAFG 183 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~K---v~~l~~~~~ 183 (504)
+.++.++++|..+ |+|++....++.+.+. +|++ .+++++- .+ .+..| .+.+.+.++
T Consensus 110 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-----------~~----~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 110 ELLDTLKENNITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGD-----------TG----TIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETS-----------SS----CCTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccc-----------cC----CCCCChHHHHHHHHHcC
Confidence 3355788899776 6899999999999999 8864 3333321 11 11112 233334455
Q ss_pred CCC--CeEEEeCCCCCHHHHhhcc-cCeeeCCCcc
Q 043920 184 ETQ--PEIGLGDRQTDIPFMALCK-EGYLVPSKPE 215 (504)
Q Consensus 184 ~~~--~~~aygDS~~DlpmL~~a~-~~~~Vnp~~~ 215 (504)
... -.+++|||.+|++|.+.+| ..+++++...
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC---
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 432 2578999999999999999 5888876554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.81 E-value=5.7e-09 Score=96.41 Aligned_cols=88 Identities=20% Similarity=0.256 Sum_probs=67.2
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----P 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~ 187 (504)
+++.++++|..+ |+|++++..++.++++ +|+++++... ..|.+.+++.....+ -
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~--------------------~~K~~~~~~~~~~~g~~~~~ 112 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR--------------------EDKLVVLDKLLAELQLGYEQ 112 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC--------------------SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc--------------------CChHHHHHHHHHHcCCChhH
Confidence 677888999876 6899999999999999 9998655421 246666666544322 2
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+++|||.+|+++++.|+.++++. +.+.++..|.
T Consensus 113 ~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad 147 (189)
T 3mn1_A 113 VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAH 147 (189)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSS
T ss_pred EEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCC
Confidence 568999999999999999999984 4555665444
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=97.55 Aligned_cols=116 Identities=18% Similarity=0.111 Sum_probs=65.9
Q ss_pred cCCCHHHHHHHHHHHcchhh---h--cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeC
Q 043920 86 VGLRVTDIESVARAVLPKFY---A--SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYK 156 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~---~--~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~ 156 (504)
.+.+.++++++.+.+...+. . ..++|++ ++.++++|..+ |+|+++...++.+++. +|++..+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~------ 159 (243)
T 2hsz_A 87 KELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSE------ 159 (243)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSE------
T ss_pred ccCCHHHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHH-cCchheEEE------
Confidence 34566666655554432211 1 1244555 44777899877 6899999999999999 896432211
Q ss_pred CeeeeeEeCC-CCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 157 GRATGLVRDP-GVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 157 g~~tG~i~g~-~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
.+++.-.+. .. .++. .+.+.+.++.. .-.+++|||.+|++|++.+|..+ .|+
T Consensus 160 -~~~~~~~~~~Kp-~~~~-~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 214 (243)
T 2hsz_A 160 -MLGGQSLPEIKP-HPAP-FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 214 (243)
T ss_dssp -EECTTTSSSCTT-SSHH-HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred -EEecccCCCCCc-CHHH-HHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEc
Confidence 111100000 00 1111 12222334432 22579999999999999999884 444
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.79 E-value=5.5e-08 Score=91.06 Aligned_cols=108 Identities=8% Similarity=0.001 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCc---HHHHHHHHHhhcCCc----EEEeeeEEEe
Q 043920 87 GLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANP---RIMVEAFLKDFLAAD----LVLGTEIATY 155 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~---~~~v~~ia~~~Lg~d----~vigt~l~~~ 155 (504)
|.+.++.+++.+.+.........++++ ++.++++|..+ ++|++. ...++.+.+. +|++ .+++++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~--- 153 (235)
T 2om6_A 78 KVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADE--- 153 (235)
T ss_dssp TCCHHHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHH---
T ss_pred CCCHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccc---
Confidence 666555555555443322122235555 45778899776 589999 8889999998 8864 3333220
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCC-CCHHHHhhcccCeee
Q 043920 156 KGRATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQ-TDIPFMALCKEGYLV 210 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~-~DlpmL~~a~~~~~V 210 (504)
.+ .+..|.+.++..+...+ -.+++|||. +|++|++.||..++.
T Consensus 154 --------~~----~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 154 --------VL----SYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp --------HT----CCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred --------cC----CCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 01 11123344444333222 257999999 999999999998754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-08 Score=95.01 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHHHHcchhhh-----cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEE
Q 043920 87 GLRVTDIESVARAVLPKFYA-----SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIA 153 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~ 153 (504)
|++.++++++.+.+...... ...+|++ ++.++++|..+ ++|++....++.+.+. +|++ .+++++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~-- 136 (226)
T 3mc1_A 60 NFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH-FKLAFYFDAIVGSS-- 136 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEEC--
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCHhheeeeeccC--
Confidence 88888777766655332211 1345555 44777889776 5899999999999999 8864 333322
Q ss_pred EeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 154 TYKGRATGLVRDPGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 154 ~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
..+ .+..|.+.++..+...++ .+++|||.+|++|++.||... .|+
T Consensus 137 ---------~~~----~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 186 (226)
T 3mc1_A 137 ---------LDG----KLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVT 186 (226)
T ss_dssp ---------TTS----SSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEES
T ss_pred ---------CCC----CCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEc
Confidence 111 334466666655443332 579999999999999999744 444
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-08 Score=94.87 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=57.1
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|..+ |+|+++...++.+.+. +|++ .+++++ ..+ .+..|.+.++.
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~-----------~~~----~~Kp~~~~~~~ 169 (240)
T 2no4_A 106 AYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSAD-----------DLK----IYKPDPRIYQF 169 (240)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGG-----------GTT----CCTTSHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEcc-----------ccC----CCCCCHHHHHH
Confidence 45555 44778899776 5899999999999998 8864 333332 111 12223333333
Q ss_pred ---HhCCC-CCeEEEeCCCCCHHHHhhcccCee-eCC
Q 043920 181 ---AFGET-QPEIGLGDRQTDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 181 ---~~~~~-~~~~aygDS~~DlpmL~~a~~~~~-Vnp 212 (504)
.++.. .-.+++|||.+|+++.+.+|..++ |+.
T Consensus 170 ~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~ 206 (240)
T 2no4_A 170 ACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINR 206 (240)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred HHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 33422 225689999999999999997754 443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-08 Score=94.30 Aligned_cols=110 Identities=11% Similarity=0.077 Sum_probs=65.9
Q ss_pred CCCHHHHHHHHHHHcchhhh---cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEe
Q 043920 87 GLRVTDIESVARAVLPKFYA---SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATY 155 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~---~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~ 155 (504)
..+.+++.+...+++.+... ...+|++ +++++++|..+ ++|++....++.+.+. +|++ .+++++-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~--- 140 (214)
T 3e58_A 65 KWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEE--- 140 (214)
T ss_dssp GSCHHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG---
T ss_pred CCCHHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeeccc---
Confidence 34555555544444433211 1345554 45778899776 5899999999999999 8874 3333321
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHH---HHhCCC-CCeEEEeCCCCCHHHHhhcccCe-eeCC
Q 043920 156 KGRATGLVRDPGVLVGNKKADALL---KAFGET-QPEIGLGDRQTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~---~~~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vnp 212 (504)
.+ .+..|.+.++ +.++.. .-.+++|||.+|++|++.+|..+ +++.
T Consensus 141 --------~~----~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 141 --------FK----ESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp --------CS----SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred --------cc----CCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 01 1111223333 334432 22579999999999999999755 4553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-08 Score=95.43 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=71.9
Q ss_pred hcCCCHHHHHHHHHHHcchhhh-----cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEe
Q 043920 85 FVGLRVTDIESVARAVLPKFYA-----SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATY 155 (504)
Q Consensus 85 ~~G~~~~~l~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~ 155 (504)
+.|.+.++++++.+.+...... ...+|++ +++++++|..+ |+|++....++.+.+. +|++..+..-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~---- 156 (240)
T 3sd7_A 82 YYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRY-FDIDRYFKYI---- 156 (240)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEE----
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-cCcHhhEEEE----
Confidence 3488888877776655433211 1245555 45778899776 5899999999999999 8874322111
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC-----eEEEeCCCCCHHHHhhccc-CeeeC
Q 043920 156 KGRATGLVRDPGVLVGNKKADALLKAFGETQP-----EIGLGDRQTDIPFMALCKE-GYLVP 211 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~-----~~aygDS~~DlpmL~~a~~-~~~Vn 211 (504)
+++...+ .+..|.+.++..+...++ .+++|||.+|++|++.+|. .+.|+
T Consensus 157 ---~~~~~~~----~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 211 (240)
T 3sd7_A 157 ---AGSNLDG----TRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVL 211 (240)
T ss_dssp ---EEECTTS----CCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred ---EeccccC----CCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence 1111111 233455555544332222 4799999999999999996 44555
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.8e-09 Score=100.55 Aligned_cols=88 Identities=17% Similarity=0.163 Sum_probs=66.7
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----P 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~ 187 (504)
+++.++++|..+ |+|+++...++.++++ +|++.++... ..|.+.++++..+.+ -
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~--------------------k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ--------------------SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC--------------------SSHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc--------------------CChHHHHHHHHHHcCcCcce
Confidence 677899999876 6899999999999999 9998655421 246666666544322 2
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.+++|||.+|+++++.|+.++++.. .+.++..|.
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad 177 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAH 177 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCC
Confidence 5689999999999999999999865 444554444
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.8e-08 Score=92.42 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=56.0
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH---HH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL---KA 181 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~---~~ 181 (504)
.++++ ++.+++.|..+ ++|++....++.+.+. +|++..+..- +++...+ .+..|...++ +.
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~-------~~~~~~~----~~kp~~~~~~~~~~~ 162 (226)
T 1te2_A 95 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDAL-------ASAEKLP----YSKPHPQVYLDCAAK 162 (226)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEE-------EECTTSS----CCTTSTHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHh-cCcHhhCcEE-------EeccccC----CCCCChHHHHHHHHH
Confidence 44555 45777889776 5899999999999998 8875322111 1111111 1111233333 33
Q ss_pred hCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 182 FGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 182 ~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
++.. .-.+++|||.+|++|++.+|.+++.
T Consensus 163 ~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 163 LGVDPLTCVALEDSVNGMIASKAARMRSIV 192 (226)
T ss_dssp HTSCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred cCCCHHHeEEEeCCHHHHHHHHHcCCEEEE
Confidence 4422 2257999999999999999998765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-08 Score=94.46 Aligned_cols=109 Identities=15% Similarity=0.145 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHcchhh----hcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCe
Q 043920 87 GLRVTDIESVARAVLPKFY----ASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGR 158 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~----~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~ 158 (504)
|.+.+++.+..+++..... ....+|++.+ .++++ ..+ |+|+++...++.+.+. +|++..+.. .
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~-------~ 128 (209)
T 2hdo_A 58 GIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRS-YPFMMRMAV-------T 128 (209)
T ss_dssp TCCGGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTT-SGGGGGEEE-------E
T ss_pred CCCHHHHHHHHHHHHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHH-cChHhhccE-------E
Confidence 5554555554554443221 1234566655 55566 776 5899999999999998 887432211 1
Q ss_pred eeeeEeCCCCCCchhH--HHHHHHH---hCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 159 ATGLVRDPGVLVGNKK--ADALLKA---FGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 159 ~tG~i~g~~~l~g~~K--v~~l~~~---~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
+++.- .+..| .+.++.. ++.. .-.+++|||.+|++|++.+|..++.
T Consensus 129 ~~~~~------~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~ 180 (209)
T 2hdo_A 129 ISADD------TPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 180 (209)
T ss_dssp ECGGG------SSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred EecCc------CCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEE
Confidence 11110 12234 3344333 3322 2257999999999999999987663
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.2e-08 Score=93.29 Aligned_cols=89 Identities=19% Similarity=0.277 Sum_probs=65.1
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ---- 186 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~---- 186 (504)
++++.++++|..+ ++|+.+...++++++. +|++.++. + +..|...+++.....+
T Consensus 42 ~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~-------~-------------~k~k~~~~~~~~~~~~~~~~ 100 (180)
T 1k1e_A 42 LGIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFL-------G-------------KLEKETACFDLMKQAGVTAE 100 (180)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEE-------S-------------CSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHCCCeEEEEeCCCcHHHHHHHHH-cCCceeec-------C-------------CCCcHHHHHHHHHHcCCCHH
Confidence 4677888899776 5899999999999999 99986441 1 1236665555433222
Q ss_pred CeEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 187 PEIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 187 ~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
-.+++|||.+|++|++.++.++++. +.+.++..|.
T Consensus 101 ~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad 136 (180)
T 1k1e_A 101 QTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVD 136 (180)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSS
T ss_pred HEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCC
Confidence 2568999999999999999999884 5566665444
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.70 E-value=4e-08 Score=92.29 Aligned_cols=102 Identities=18% Similarity=0.098 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeee
Q 043920 89 RVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRAT 160 (504)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~t 160 (504)
+.++.+++.+.+.. ...+|++ ++.++++|..+ |+|+++...++.+.+. +|+ |.+++++.
T Consensus 84 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-------- 150 (233)
T 3umb_A 84 GNHAEATLMREYAC----LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDA-------- 150 (233)
T ss_dssp CHHHHHHHHHHHHS----CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGG--------
T ss_pred CHHHHHHHHHHHhc----CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecc--------
Confidence 45555544444321 2245555 55778899665 6899999999999998 886 34443321
Q ss_pred eeEeCCCCCCchhHHHHHHH---HhCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 161 GLVRDPGVLVGNKKADALLK---AFGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 161 G~i~g~~~l~g~~Kv~~l~~---~~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
+..+..|.+.++. .++.. .-.+++|||.+|+.|.+.+|..++.
T Consensus 151 -------~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 151 -------VRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp -------TTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred -------cCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1022223333333 33422 2257899999999999999988765
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=94.95 Aligned_cols=111 Identities=8% Similarity=-0.050 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----E-EEeeeEEEeCCe
Q 043920 88 LRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----L-VLGTEIATYKGR 158 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~-vigt~l~~~~g~ 158 (504)
.+.+.++++.+.+.+..-....+|++ +++++++|..+ |+|++....++.+.+. +|++ . +++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~------- 161 (259)
T 4eek_A 90 PPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRV-AGLTELAGEHIYDPS------- 161 (259)
T ss_dssp CCTTHHHHHHHHHHHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHH-TTCHHHHCSCEECGG-------
T ss_pred CCHHHHHHHHHHHHHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHh-cChHhhccceEEeHh-------
Confidence 44455555444443322122345555 45777889665 6899999999999999 8874 2 33322
Q ss_pred eeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccC-eeeCCC
Q 043920 159 ATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEG-YLVPSK 213 (504)
Q Consensus 159 ~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 213 (504)
..+. .+.-|.+.++..+...+ -.+++|||.+|+.|.+.+|.. ++|+..
T Consensus 162 ----~~~~---~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g 214 (259)
T 4eek_A 162 ----WVGG---RGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVP 214 (259)
T ss_dssp ----GGTT---CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred ----hcCc---CCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence 1110 11122334444333222 257999999999999999997 667654
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.69 E-value=2.2e-08 Score=94.16 Aligned_cols=86 Identities=12% Similarity=0.028 Sum_probs=56.5
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|..+ |+|+++...++.+.+. +|++ .+++++- .+ .+..|.+.++.
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~Kp~~~~~~~ 159 (232)
T 1zrn_A 96 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDP-----------VQ----VYKPDNRVYEL 159 (232)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGG-----------GT----CCTTSHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecc-----------cC----CCCCCHHHHHH
Confidence 45555 45778899776 5899999999999998 8864 3333321 11 12223333333
Q ss_pred ---HhCCC-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 181 ---AFGET-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 181 ---~~~~~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
.++.. .-.+++|||.+|+.+.+.+|..++.
T Consensus 160 ~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 160 AEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp HHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 33422 2257899999999999999998654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.5e-08 Score=92.46 Aligned_cols=108 Identities=16% Similarity=0.140 Sum_probs=66.7
Q ss_pred CCCHHHHHHHHHHHcchhh----hcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEE
Q 043920 87 GLRVTDIESVARAVLPKFY----ASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIAT 154 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~----~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~ 154 (504)
..+.++++++.+.+...+. ....++++ ++.++++|..+ ++|++....++.+.+. +|++ .+++++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~-- 142 (233)
T 3s6j_A 66 SITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA-LKLDINKINIVTRDD-- 142 (233)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECGGG--
T ss_pred CCCHHHHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHh-cchhhhhheeecccc--
Confidence 3556666665554432211 12345555 45778899666 6899999999999998 8864 3333321
Q ss_pred eCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhccc-Ceee
Q 043920 155 YKGRATGLVRDPGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKE-GYLV 210 (504)
Q Consensus 155 ~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~-~~~V 210 (504)
.+ .+..|.+.++..+...++ .+++|||.+|++|++.+|. .+.|
T Consensus 143 ---------~~----~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 190 (233)
T 3s6j_A 143 ---------VS----YGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGL 190 (233)
T ss_dssp ---------SS----CCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred ---------CC----CCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEE
Confidence 11 233344555554433332 5799999999999999997 4445
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.68 E-value=7e-08 Score=89.57 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=52.6
Q ss_pred HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH---HhCCC
Q 043920 114 WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK---AFGET 185 (504)
Q Consensus 114 ~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~---~~~~~ 185 (504)
++.++++|..+ ++|++....++.+.+. +|++ .+++++ ..+ .+..|...++. .++..
T Consensus 98 l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~----~~k~~~~~~~~~~~~~~~~ 161 (225)
T 3d6j_A 98 LTHLKKQGIRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGE-----------DVT----HHKPDPEGLLLAIDRLKAC 161 (225)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGG-----------GCS----SCTTSTHHHHHHHHHTTCC
T ss_pred HHHHHHCCCeEEEEECCCHHHHHHHHHH-cCchhheeeeeehh-----------hcC----CCCCChHHHHHHHHHhCCC
Confidence 44677888776 5899999999999998 8864 233222 111 11122233333 34422
Q ss_pred -CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 186 -QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 186 -~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
.-.+++|||.+|++|++.+|.+++.
T Consensus 162 ~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 162 PEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred hHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 1256999999999999999997654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=2.3e-08 Score=92.50 Aligned_cols=102 Identities=18% Similarity=0.107 Sum_probs=63.6
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.+|++ +++++++|..+ |+|++....++.+.+. +|++..+..+ ..+++.. + .+..|.+.++..+..
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~-----~i~~~~~-~----~~kp~~~~~~~~~~~ 139 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEA-----DVLGRDE-A----PPKPHPGGLLKLAEA 139 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGG-----GEECTTT-S----CCTTSSHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcc-----eEEeCCC-C----CCCCCHHHHHHHHHH
Confidence 44544 55788899776 5899999999999999 8975332111 1111111 0 222233444444333
Q ss_pred CCC----eEEEeCCCCCHHHHhhccc-CeeeCC-Ccchhcccc
Q 043920 185 TQP----EIGLGDRQTDIPFMALCKE-GYLVPS-KPEVKAVTC 221 (504)
Q Consensus 185 ~~~----~~aygDS~~DlpmL~~a~~-~~~Vnp-~~~l~~~A~ 221 (504)
.++ .+++|||.+|++|++.+|. .++++. ...++..|.
T Consensus 140 ~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad 182 (205)
T 3m9l_A 140 WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTD 182 (205)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCS
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCC
Confidence 332 5799999999999999997 888865 334444443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-07 Score=90.89 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=66.1
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
++|++ ++.++++|..+ |+|+++...++.+++. +|++..+. .+ .+.+|+..++.....
T Consensus 145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~-----------------~~-~~~~k~~~~k~~~~~ 205 (280)
T 3skx_A 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFA-----------------EV-LPHEKAEKVKEVQQK 205 (280)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEEC-----------------SC-CGGGHHHHHHHHHTT
T ss_pred CCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhH-----------------hc-CHHHHHHHHHHHHhc
Confidence 45555 45778899776 6899999999999999 89875332 12 556899999987665
Q ss_pred CCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 185 TQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 185 ~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.. .+++|||.+|++|++.||.++++..
T Consensus 206 ~~-~~~vGD~~nDi~~~~~Ag~~va~~~ 232 (280)
T 3skx_A 206 YV-TAMVGDGVNDAPALAQADVGIAIGA 232 (280)
T ss_dssp SC-EEEEECTTTTHHHHHHSSEEEECSC
T ss_pred CC-EEEEeCCchhHHHHHhCCceEEecC
Confidence 43 5799999999999999999888764
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.4e-08 Score=89.32 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=63.1
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ---- 186 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~---- 186 (504)
+++++++++|..+ |+|+++...++.+++. +|++..+.. +..|.+.++..+...+
T Consensus 43 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~--------------------~kp~~~~~~~~~~~~~~~~~ 101 (162)
T 2p9j_A 43 IGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG--------------------SYKKLEIYEKIKEKYSLKDE 101 (162)
T ss_dssp HHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC--------------------C--CHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC--------------------CCCCHHHHHHHHHHcCCCHH
Confidence 5677888899776 5899999999999999 998754321 1124444443332222
Q ss_pred CeEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 187 PEIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 187 ~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
-.+++|||.+|+++++.+|.++++ |+.+.++..|.
T Consensus 102 ~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~ 137 (162)
T 2p9j_A 102 EIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAV 137 (162)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred HEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCC
Confidence 256899999999999999999887 45555665544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.9e-07 Score=87.05 Aligned_cols=106 Identities=13% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCHHHHHHHHHHHcchhhhc--ccCHHH---HHHHhhCC-CEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCee
Q 043920 87 GLRVTDIESVARAVLPKFYAS--DLHPES---WRVFSSCG-KRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRA 159 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~~--~~~~~~---~~~~~~~G-~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~ 159 (504)
..+.+.++++.+.+.. .+.. ..+|++ ++.++++| ..+ ++|.+....++.+.+. +|++..+..-+
T Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~------- 153 (234)
T 3ddh_A 83 KIAADIIRQIVDLGKS-LLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIE------- 153 (234)
T ss_dssp CCCHHHHHHHHHHHHH-HTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEE-------
T ss_pred CCCHHHHHHHHHHHHH-HhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheee-------
Confidence 4566777666554433 2222 245544 55778888 887 5899999999999998 88642111111
Q ss_pred eeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCC-CCHHHHhhcccCeee
Q 043920 160 TGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQ-TDIPFMALCKEGYLV 210 (504)
Q Consensus 160 tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~-~DlpmL~~a~~~~~V 210 (504)
++ + ..|.+.++..+...+ -.+++|||. +|+.|.+.+|-.++.
T Consensus 154 ~~---~------kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~ 200 (234)
T 3ddh_A 154 VM---S------DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVH 200 (234)
T ss_dssp EE---S------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEE
T ss_pred ec---C------CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEE
Confidence 10 1 124444444433222 257999996 999999999987654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.5e-07 Score=86.09 Aligned_cols=110 Identities=7% Similarity=0.030 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHcchhhhcccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHH------HhhcCC----cEEEeeeEE
Q 043920 88 LRVTDIESVARAVLPKFYASDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFL------KDFLAA----DLVLGTEIA 153 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia------~~~Lg~----d~vigt~l~ 153 (504)
.+.+++.+...++.. .++|++.+ .++++ ..+ |+|++....++.+. +. +|+ |.+++++-
T Consensus 97 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~- 168 (229)
T 4dcc_A 97 VSDKQIDAAWNSFLV-----DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYE- 168 (229)
T ss_dssp CCHHHHHHHHHTTBC-----CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHH-
T ss_pred CCHHHHHHHHHHHHH-----hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecc-
Confidence 556666554443322 25676655 55666 766 58999999998777 44 564 44444331
Q ss_pred EeCCeeeeeEeCCCCCCchhHHHHHHH---HhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeCCCcchhcc
Q 043920 154 TYKGRATGLVRDPGVLVGNKKADALLK---AFGET-QPEIGLGDRQTDIPFMALCKE-GYLVPSKPEVKAV 219 (504)
Q Consensus 154 ~~~g~~tG~i~g~~~l~g~~Kv~~l~~---~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~l~~~ 219 (504)
.+ .+..+.+.++. .++.. .-.+++|||.+|+.+.+.+|- .+.||+...+++.
T Consensus 169 ----------~~----~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~ 225 (229)
T 4dcc_A 169 ----------MK----MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHL 225 (229)
T ss_dssp ----------HT----CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGG
T ss_pred ----------cC----CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHH
Confidence 11 11112233333 33432 225789999999999999995 5677877776654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.8e-07 Score=84.92 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=58.0
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.+|++ ++.++++|..+ ++|++.+ .++.+.+. +|++..+.. .+++...+.....+ +-.+.+.+.++.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~-------~~~~~~~~~~kp~~-~~~~~~~~~~~~ 152 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTE-------VVTSSSGFKRKPNP-ESMLYLREKYQI 152 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEE-------EECGGGCCCCTTSC-HHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheee-------eeeccccCCCCCCH-HHHHHHHHHcCC
Confidence 45555 44777899776 5888775 67888888 887432211 11111111101011 222333344454
Q ss_pred CCCeEEEeCCCCCHHHHhhcccC-eeeCCCcchhc
Q 043920 185 TQPEIGLGDRQTDIPFMALCKEG-YLVPSKPEVKA 218 (504)
Q Consensus 185 ~~~~~aygDS~~DlpmL~~a~~~-~~Vnp~~~l~~ 218 (504)
. -.+++|||.+|++|++.+|.. ++++....+++
T Consensus 153 ~-~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~ 186 (190)
T 2fi1_A 153 S-SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ 186 (190)
T ss_dssp S-SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred C-eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhh
Confidence 4 467999999999999999975 56676655554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=90.17 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=55.7
Q ss_pred ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 108 DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 108 ~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
..+|++.+ .++ |..+ |+|+++...++.+.+. +|++ .+++++ ..+ .+..|.+.++
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~-----------~~~----~~Kp~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVD-----------AKR----VFKPHPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGG-----------GGT----CCTTSHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEcc-----------ccC----CCCCCHHHHH
Confidence 35666655 555 8776 6899999999999998 8864 333322 111 1222333333
Q ss_pred HH---hCCC-CCeEEEeCCCCCHHHHhhcccCee-eCC
Q 043920 180 KA---FGET-QPEIGLGDRQTDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 180 ~~---~~~~-~~~~aygDS~~DlpmL~~a~~~~~-Vnp 212 (504)
.. ++.. .-.+++|||.+|+++.+.+|..++ +|.
T Consensus 155 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 155 LVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp HHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 33 3422 225689999999999999998764 554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.56 E-value=5.6e-07 Score=85.29 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=56.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH---HH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL---KA 181 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~---~~ 181 (504)
.+|++ ++.++++|..+ |+|++...+++.+.+. +|++..+. ..+++...+ .+..|.+.++ +.
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~-------~~~~~~~~~----~~Kp~~~~~~~~~~~ 162 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFE-------HVIISDFEG----VKKPHPKIFKKALKA 162 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCS-------EEEEGGGGT----CCTTCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhcc-------EEEEeCCCC----CCCCCHHHHHHHHHH
Confidence 45655 44777889776 6899999999999998 88743221 111111111 1112233333 33
Q ss_pred hCCC-CCeEEEeCCC-CCHHHHhhcccCeee
Q 043920 182 FGET-QPEIGLGDRQ-TDIPFMALCKEGYLV 210 (504)
Q Consensus 182 ~~~~-~~~~aygDS~-~DlpmL~~a~~~~~V 210 (504)
++.. .-.+++|||. +|++|.+.+|..++.
T Consensus 163 ~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 163 FNVKPEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp HTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred cCCCcccEEEECCCchHhHHHHHHCCCEEEE
Confidence 4432 2257999998 999999999987543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.54 E-value=9.4e-08 Score=89.85 Aligned_cols=88 Identities=19% Similarity=0.206 Sum_probs=57.3
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH-
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL- 179 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~- 179 (504)
.+|++. +.++++|..+ |+|++.+..++.+.+. +|++ .+++++- .+ .+..|.+.++
T Consensus 84 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~-----------~~----~~Kp~~~~~~~ 147 (222)
T 2nyv_A 84 PYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDT-----------FG----EKKPSPTPVLK 147 (222)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTS-----------SC----TTCCTTHHHHH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCc-----------CC----CCCCChHHHHH
Confidence 456554 4677899876 6899999999999999 8864 3333320 01 1112233333
Q ss_pred --HHhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 180 --KAFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 180 --~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
+.++.. .-.+++|||.+|+++.+.+|-. ++|+.
T Consensus 148 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 184 (222)
T 2nyv_A 148 TLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALW 184 (222)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred HHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 233432 2256899999999999999988 56653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.1e-07 Score=89.40 Aligned_cols=116 Identities=7% Similarity=-0.005 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHc---chhhhc----ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeee
Q 043920 87 GLRVTDIESVARAVL---PKFYAS----DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTE 151 (504)
Q Consensus 87 G~~~~~l~~~~~~~~---~~~~~~----~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~ 151 (504)
..+.++++++.+.+. .+.+.. .++|++ ++.++++|..+ |+|++.. ++.+.+. +|+ +.+++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~~ 140 (233)
T 3nas_A 64 KYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRR-LAIIDDFHAIVDPT 140 (233)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeHh
Confidence 456666666554332 221111 145555 45778899877 5788765 7888888 886 4444433
Q ss_pred EEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCeeeC-CCcchh
Q 043920 152 IATYKGRATGLVRDPGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGYLVP-SKPEVK 217 (504)
Q Consensus 152 l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~ 217 (504)
-. +. +. . ..+ =.+.+.+.++.. .-.+++|||.+|+.|.+.||..++.- ....++
T Consensus 141 ~~-------~~--~K-p-~~~-~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~ 196 (233)
T 3nas_A 141 TL-------AK--GK-P-DPD-IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML 196 (233)
T ss_dssp -------------------CC-HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC------
T ss_pred hC-------CC--CC-C-ChH-HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc
Confidence 10 00 00 0 111 112233334432 22579999999999999999876554 443343
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.5e-07 Score=85.49 Aligned_cols=97 Identities=8% Similarity=0.031 Sum_probs=57.4
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhh-----cCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDF-----LAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKA 175 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~-----Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv 175 (504)
.+|++.+ .+++ |..+ |+|+++...++.+.+.+ +|+ |.+++++ ..+... -..+-.
T Consensus 90 ~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~-----------~~~~~K-p~~~~~ 156 (211)
T 2i6x_A 90 ISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASC-----------QMGKYK-PNEDIF 156 (211)
T ss_dssp ECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHH-----------HHTCCT-TSHHHH
T ss_pred cChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeec-----------ccCCCC-CCHHHH
Confidence 5676655 5666 8776 58999999998887751 254 3444332 111100 011122
Q ss_pred HHHHHHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeCCCcchhc
Q 043920 176 DALLKAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVPSKPEVKA 218 (504)
Q Consensus 176 ~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~l~~ 218 (504)
+.+.+.++.. .-.+++|||.+|+++.+.+|. .+.+|....++.
T Consensus 157 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~ 201 (211)
T 2i6x_A 157 LEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIP 201 (211)
T ss_dssp HHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHH
T ss_pred HHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 2233334432 225799999999999999995 456676665543
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-08 Score=90.66 Aligned_cols=88 Identities=14% Similarity=0.067 Sum_probs=65.1
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----P 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~ 187 (504)
+++.++++|..+ |+|+++...++.+++. +|++.++... ..|.+.++......+ -
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~--------------------kpk~~~~~~~~~~~~~~~~~ 97 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV--------------------VDKLSAAEELCNELGINLEQ 97 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC--------------------SCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc--------------------CChHHHHHHHHHHcCCCHHH
Confidence 677888899766 6899999999999999 9998655431 125555554433222 3
Q ss_pred eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.+++|||.+|+++++.++.++++ |..+.++..|.
T Consensus 98 ~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad 132 (164)
T 3e8m_A 98 VAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLST 132 (164)
T ss_dssp EEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCS
T ss_pred EEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCc
Confidence 56899999999999999999988 45556665554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.52 E-value=4.7e-08 Score=89.26 Aligned_cols=90 Identities=22% Similarity=0.246 Sum_probs=55.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE----EEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL----VLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~----vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ ++.++++|..+ ++|++....++ ..+. +|++. +++++- .+ ...+ .. +-.+.+.+
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~-------~~-~~Kp---~~-~~~~~~~~ 151 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQS-------GF-VRKP---SP-EAATYLLD 151 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGG-------CC-CCTT---SS-HHHHHHHH
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCc-------CC-CCCC---Cc-HHHHHHHH
Confidence 34555 45778899776 58999988888 8888 78743 222220 00 0000 11 11223333
Q ss_pred HhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 181 AFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
.++.. .-.+++|||.+|++|++.+|.+ ++++.
T Consensus 152 ~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~ 185 (207)
T 2go7_A 152 KYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE 185 (207)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSC
T ss_pred HhCCCcccEEEECCCHHHHHHHHHCCCeEEEEec
Confidence 34432 2257999999999999999997 66654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.52 E-value=4.3e-07 Score=84.74 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=57.2
Q ss_pred cCHHHHHHHhhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCc--hhHHHHHHH---Hh
Q 043920 109 LHPESWRVFSSCG-KRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVG--NKKADALLK---AF 182 (504)
Q Consensus 109 ~~~~~~~~~~~~G-~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g--~~Kv~~l~~---~~ 182 (504)
.++++.+.++.-. ..+++|++....++.+.+. +|++..+. +..+++...+ .+ ..|...++. .+
T Consensus 88 ~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~l~~~~~------~~~~~~~~~~----~~~~kpk~~~~~~~~~~l 156 (229)
T 2fdr_A 88 IIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFA------PHIYSAKDLG----ADRVKPKPDIFLHGAAQF 156 (229)
T ss_dssp BCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTT------TCEEEHHHHC----TTCCTTSSHHHHHHHHHH
T ss_pred cCcCHHHHHHHhCCCEEEEECCChhHHHHHHHh-CChHHhcc------ceEEeccccc----cCCCCcCHHHHHHHHHHc
Confidence 4566666554422 4446899999999999998 88643221 1112221111 12 223334433 34
Q ss_pred CCC-CCeEEEeCCCCCHHHHhhcccC-eeeCCC
Q 043920 183 GET-QPEIGLGDRQTDIPFMALCKEG-YLVPSK 213 (504)
Q Consensus 183 ~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 213 (504)
+.. .-.+++|||.+|++|++.+|.. ++++..
T Consensus 157 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~ 189 (229)
T 2fdr_A 157 GVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGA 189 (229)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred CCChhHeEEEcCCHHHHHHHHHCCCEEEEEecC
Confidence 432 2257999999999999999997 777754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-07 Score=88.98 Aligned_cols=110 Identities=15% Similarity=-0.018 Sum_probs=66.5
Q ss_pred CCCHHHHHHHHHHHcchh---hh--cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC-----cEEEeeeE
Q 043920 87 GLRVTDIESVARAVLPKF---YA--SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA-----DLVLGTEI 152 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~---~~--~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-----d~vigt~l 152 (504)
..+.++++++...+...+ +. ...+|++ ++.++++|..+ |+|++....++.+.+. +|+ |.+++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 163 (277)
T 3iru_A 85 ASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVFATD 163 (277)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEecHHh
Confidence 356666666555543221 11 1345554 45778899776 5899999999998887 664 33333321
Q ss_pred EEeCCeeeeeEeCCCCCCchhHHH---HHHHHhCCCC--CeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 153 ATYKGRATGLVRDPGVLVGNKKAD---ALLKAFGETQ--PEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 153 ~~~~g~~tG~i~g~~~l~g~~Kv~---~l~~~~~~~~--~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
.+ .+..|.+ .+.+.+|... -.+++|||.+|+.|.+.+|-. +.|+.
T Consensus 164 -----------~~----~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~ 214 (277)
T 3iru_A 164 -----------VV----RGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSC 214 (277)
T ss_dssp -----------SS----SCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECS
T ss_pred -----------cC----CCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 11 2222333 3334455433 257999999999999999965 45543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-06 Score=81.39 Aligned_cols=92 Identities=11% Similarity=-0.040 Sum_probs=59.2
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.+|++. +.++++ ..+ ++|++....++...+. +|++..+. ..+++.. +-.+..|.+.++..+..
T Consensus 104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~-------~~~~~~~----~~~~kp~~~~~~~~~~~ 170 (238)
T 3ed5_A 104 LIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD-SGLFPFFK-------DIFVSED----TGFQKPMKEYFNYVFER 170 (238)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH-TTCGGGCS-------EEEEGGG----TTSCTTCHHHHHHHHHT
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH-cChHhhhh-------eEEEecc----cCCCCCChHHHHHHHHH
Confidence 455554 466667 776 5899999999999998 88643221 1111111 11233345566655544
Q ss_pred CC-C----eEEEeCCC-CCHHHHhhccc-CeeeCCC
Q 043920 185 TQ-P----EIGLGDRQ-TDIPFMALCKE-GYLVPSK 213 (504)
Q Consensus 185 ~~-~----~~aygDS~-~DlpmL~~a~~-~~~Vnp~ 213 (504)
.+ + .+++|||. +|+.|.+.+|. .++++..
T Consensus 171 ~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~ 206 (238)
T 3ed5_A 171 IPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPD 206 (238)
T ss_dssp STTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred cCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence 44 3 46999998 99999999998 5667764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.3e-07 Score=89.83 Aligned_cols=87 Identities=14% Similarity=0.189 Sum_probs=56.4
Q ss_pred cHHHHHHHHHhhcCCcEEEeee-EEE--eCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHh
Q 043920 130 PRIMVEAFLKDFLAADLVLGTE-IAT--YKGRATGLVRDPGVLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMA 202 (504)
Q Consensus 130 ~~~~v~~ia~~~Lg~d~vigt~-l~~--~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~ 202 (504)
....++++.+. +|++..+.+. ... .+|.+++.+... +..|...++..+...++ .+++|||.+|++|++
T Consensus 170 ~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~ 244 (289)
T 3gyg_A 170 NLLAIEKICEE-YGVSVNINRCNPLAGDPEDSYDVDFIPI----GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQ 244 (289)
T ss_dssp HHHHHHHHHHH-HTEEEEEEECCGGGTCCTTEEEEEEEES----CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred HHHHHHHHHHH-cCCCEEEEEccccccCCCCceEEEEEeC----CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHH
Confidence 45566777777 7876433321 000 024566666543 44677777766543332 579999999999999
Q ss_pred hcccCeeeC-CCcchhcccc
Q 043920 203 LCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 203 ~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|+.++++. .++.++..|.
T Consensus 245 ~ag~~~~~~~~~~~~~~~a~ 264 (289)
T 3gyg_A 245 TVGNGYLLKNATQEAKNLHN 264 (289)
T ss_dssp TSSEEEECTTCCHHHHHHCC
T ss_pred hCCcEEEECCccHHHHHhCC
Confidence 999999994 5666776554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.9e-06 Score=79.38 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=58.5
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++ +++++ +|..+ ++|+++...++.+.+. +|++ .+++++. .+ .+..|.+.++.
T Consensus 108 ~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~-----------~~----~~kp~~~~~~~ 170 (240)
T 3qnm_A 108 LMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRS-AGVDRYFKKIILSED-----------LG----VLKPRPEIFHF 170 (240)
T ss_dssp BSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGG-----------TT----CCTTSHHHHHH
T ss_pred cCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHH-cChHhhceeEEEecc-----------CC----CCCCCHHHHHH
Confidence 45555 44677 88776 5899999999999998 8864 3333221 11 23334555555
Q ss_pred HhCCCCC----eEEEeCCC-CCHHHHhhcccCe-eeCCCc
Q 043920 181 AFGETQP----EIGLGDRQ-TDIPFMALCKEGY-LVPSKP 214 (504)
Q Consensus 181 ~~~~~~~----~~aygDS~-~DlpmL~~a~~~~-~Vnp~~ 214 (504)
.+...++ .+++|||. +|+.|.+.+|-.+ .+|...
T Consensus 171 ~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~ 210 (240)
T 3qnm_A 171 ALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTE 210 (240)
T ss_dssp HHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred HHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCC
Confidence 4433332 57999995 9999999999875 556655
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-07 Score=87.60 Aligned_cols=93 Identities=18% Similarity=-0.019 Sum_probs=57.5
Q ss_pred cCHHH---HHHHhhC-CCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHH---HHH
Q 043920 109 LHPES---WRVFSSC-GKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADA---LLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~-G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~---l~~ 180 (504)
.+|++ ++.++++ |..+ |+|++...+++.+.+. +|++..+... .++.-.. . .+..+.+. +.+
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~-------~~~~~~~--~-~~k~~~~~~~~~~~ 162 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFG-------AFADDAL--D-RNELPHIALERARR 162 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCE-------ECTTTCS--S-GGGHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCcc-------eecCCCc--C-ccchHHHHHHHHHH
Confidence 44555 4477788 8766 6899999999999998 8876433211 1110000 0 12122333 333
Q ss_pred HhC--C-CCCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 181 AFG--E-TQPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 181 ~~~--~-~~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
.++ . ..-.+++|||.+|++|++.||.. ++|+.
T Consensus 163 ~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 163 MTGANYSPSQIVIIGDTEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp HHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECC
T ss_pred HhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence 445 2 12357999999999999999987 55554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.48 E-value=3.1e-07 Score=87.04 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=63.3
Q ss_pred CCCHHHHHHHHHHHcchh---hhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcC--C--cEEEeeeEEEe
Q 043920 87 GLRVTDIESVARAVLPKF---YASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLA--A--DLVLGTEIATY 155 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~---~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg--~--d~vigt~l~~~ 155 (504)
..+.++++++.+.+.... .....+|++ ++.++++|..+ ++|+++...++...+.-+. + |.+++++-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~l~~~f~~d~i~~~~~--- 161 (243)
T 3qxg_A 85 EATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHKELMVTAFD--- 161 (243)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHHHSTTTCCGGGEECTTT---
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHhHHHhcCcceEEeHHh---
Confidence 347777776665543211 112345555 45778899776 5899887766665543011 2 33333321
Q ss_pred CCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhccc-CeeeCC
Q 043920 156 KGRATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKE-GYLVPS 212 (504)
Q Consensus 156 ~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~-~~~Vnp 212 (504)
.+ .+..|.+.++..+...+ -.+++|||.+|+.|.+.+|. .++|+.
T Consensus 162 --------~~----~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~ 211 (243)
T 3qxg_A 162 --------VK----YGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNT 211 (243)
T ss_dssp --------CS----SCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred --------CC----CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeC
Confidence 01 22233344444333222 25799999999999999996 556654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.47 E-value=9.5e-08 Score=87.96 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=57.2
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCc-hhHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVG-NKKADALL 179 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g-~~Kv~~l~ 179 (504)
.+|++.+ .++++|..+ |+|+++...++.+.+..+| +|.+++++- .+. . .. .+-.+.+.
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~-----------~~~-~-Kp~~~~~~~~~ 158 (206)
T 2b0c_A 92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQD-----------LGM-R-KPEARIYQHVL 158 (206)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHH-----------HTC-C-TTCHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecc-----------cCC-C-CCCHHHHHHHH
Confidence 5676655 677899776 5899887776655443123 354554431 111 0 11 11222333
Q ss_pred HHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeCCCcchhc
Q 043920 180 KAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVPSKPEVKA 218 (504)
Q Consensus 180 ~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~l~~ 218 (504)
+.++.. .-.+++|||.+|+++.+.+|- .+.++....+++
T Consensus 159 ~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 159 QAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred HHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 334432 225689999999999999995 556777665543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.47 E-value=4.9e-07 Score=83.76 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=54.3
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH---H
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK---A 181 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~---~ 181 (504)
.+|++ ++.++++|..+ ++|++ ..++.+.+. +|+...+ +..+++...+ .+..|.+.++. .
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~-~~l~~~f-------~~~~~~~~~~----~~Kp~~~~~~~~~~~ 157 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLER-MNLTGYF-------DAIADPAEVA----ASKPAPDIFIAAAHA 157 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHH-TTCGGGC-------SEECCTTTSS----SCTTSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHH-cChHHHc-------ceEeccccCC----CCCCChHHHHHHHHH
Confidence 44555 44677889776 57887 456777787 7864211 1111111111 11122223333 3
Q ss_pred hCCC-CCeEEEeCCCCCHHHHhhcccCee-eCCCcchh
Q 043920 182 FGET-QPEIGLGDRQTDIPFMALCKEGYL-VPSKPEVK 217 (504)
Q Consensus 182 ~~~~-~~~~aygDS~~DlpmL~~a~~~~~-Vnp~~~l~ 217 (504)
++.. .-.+++|||.+|++|++.||..++ +|..+.++
T Consensus 158 lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~ 195 (221)
T 2wf7_A 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG 195 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC
T ss_pred cCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc
Confidence 4422 225799999999999999998765 46554454
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.45 E-value=4.4e-07 Score=86.17 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=56.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC---cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA---DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA 181 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~---d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~ 181 (504)
.+|.+ ++.++++|..+ |+|++++..++.+.+. +|+ |.+++++. .+ .+..|.+.++..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~f~~~~~~~~-----------~~----~~Kp~p~~~~~~ 174 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEE-LFPGSFDFALGEKS-----------GI----RRKPAPDMTSEC 174 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HSTTTCSEEEEECT-----------TS----CCTTSSHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCcceeEEEecCC-----------CC----CCCCCHHHHHHH
Confidence 34555 44677899887 6899999999999988 775 44444321 00 222333444433
Q ss_pred ---hCCC-CCeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 182 ---FGET-QPEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 182 ---~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
++.. .-.+++|||.+|+.+.+.||... .|+
T Consensus 175 ~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~ 209 (240)
T 2hi0_A 175 VKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVN 209 (240)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 3422 22579999999999999999853 454
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.43 E-value=9e-07 Score=85.01 Aligned_cols=89 Identities=16% Similarity=-0.046 Sum_probs=53.7
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH---HHhCCCC--
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL---KAFGETQ-- 186 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~---~~~~~~~-- 186 (504)
.++.++++|..+ ++|+++...++.+.+. +|++..+. +..+++...+ .+..|...++ +.++...
T Consensus 111 ~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~------~~~~~~~~~~----~~kp~~~~~~~~~~~lgi~~~~ 179 (267)
T 1swv_A 111 VIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKP------DFLVTPDDVP----AGRPYPWMCYKNAMELGVYPMN 179 (267)
T ss_dssp HHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCC------SCCBCGGGSS----CCTTSSHHHHHHHHHHTCCSGG
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCcccCh------HheecCCccC----CCCCCHHHHHHHHHHhCCCCCc
Confidence 345777889776 5899998889988887 66432211 1122222111 1222333333 3345322
Q ss_pred CeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 187 PEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 187 ~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
-.+++|||.+|++|++.||.. +.|+.
T Consensus 180 ~~i~iGD~~nDi~~a~~aG~~~i~v~~ 206 (267)
T 1swv_A 180 HMIKVGDTVSDMKEGRNAGMWTVGVIL 206 (267)
T ss_dssp GEEEEESSHHHHHHHHHTTSEEEEECT
T ss_pred CEEEEeCCHHHHHHHHHCCCEEEEEcC
Confidence 357999999999999999974 44543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.42 E-value=6e-07 Score=82.55 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=53.0
Q ss_pred HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCe
Q 043920 114 WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPE 188 (504)
Q Consensus 114 ~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~ 188 (504)
++.++++ ..+ |+|+++...++.+.+. +|++ .+++++ -.+..--..+ -.+.+.+.++ ..-.
T Consensus 82 l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~-----------~~~~~Kp~~~-~~~~~~~~~~-~~~~ 146 (201)
T 2w43_A 82 LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAE-----------SVKEYKPSPK-VYKYFLDSIG-AKEA 146 (201)
T ss_dssp HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGG-----------GGTCCTTCHH-HHHHHHHHHT-CSCC
T ss_pred HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehh-----------hcCCCCCCHH-HHHHHHHhcC-CCcE
Confidence 6667777 777 5899999999999998 8864 333332 1110000111 1222333345 3446
Q ss_pred EEEeCCCCCHHHHhhcccCee-eCC
Q 043920 189 IGLGDRQTDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 189 ~aygDS~~DlpmL~~a~~~~~-Vnp 212 (504)
+++|||.+|+.+.+.+|-.++ |+.
T Consensus 147 ~~vGD~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 147 FLVSSNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECS
T ss_pred EEEeCCHHHhHHHHHCCCEEEEECC
Confidence 789999999999999998754 443
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.7e-07 Score=85.54 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHcchh---hhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcC--C--cEEEeeeEEEeC
Q 043920 88 LRVTDIESVARAVLPKF---YASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLA--A--DLVLGTEIATYK 156 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~---~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg--~--d~vigt~l~~~~ 156 (504)
.+.++++++.+.+.... .....+|++ ++.++++|..+ |+|++....++...+.-+. + |.+++++-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~l~~~f~~~~~~~~~~---- 160 (247)
T 3dv9_A 85 ATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGIFQANLMVTAFD---- 160 (247)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHHHSTTTCCGGGEECGGG----
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHhhHHHhcCCCeEEeccc----
Confidence 47777776655542211 112345555 45778899776 5899987777766653022 3 44444331
Q ss_pred CeeeeeEeCCCCCCchhHHHHHHHH---hCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCCC
Q 043920 157 GRATGLVRDPGVLVGNKKADALLKA---FGET-QPEIGLGDRQTDIPFMALCKEG-YLVPSK 213 (504)
Q Consensus 157 g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 213 (504)
.+ .+..|.+.++.. +|.. .-.+++|||.+|+.|.+.+|-. ++|+..
T Consensus 161 -------~~----~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~ 211 (247)
T 3dv9_A 161 -------VK----YGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTG 211 (247)
T ss_dssp -------CS----SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCS
T ss_pred -------CC----CCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCC
Confidence 01 222233333333 3422 2257999999999999999964 666653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=6e-07 Score=85.47 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHHHcchhhh-cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCC
Q 043920 87 GLRVTDIESVARAVLPKFYA-SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKG 157 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~~~-~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g 157 (504)
..+.+++.+...+.+.+.+. ...+|++ ++.++++|..+ |+|++....++......+|+ |.+++++- .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~----~ 165 (250)
T 3l5k_A 90 PMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDD----P 165 (250)
T ss_dssp SSCHHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTC----T
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecch----h
Confidence 34556665544444433221 1245555 45778899665 68999876666544321343 44443320 0
Q ss_pred eeeeeEeCCCCCCchhHHHHHHHH---hCCC---CCeEEEeCCCCCHHHHhhcccCe-eeCC
Q 043920 158 RATGLVRDPGVLVGNKKADALLKA---FGET---QPEIGLGDRQTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 158 ~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~---~~~~aygDS~~DlpmL~~a~~~~-~Vnp 212 (504)
. +..+.-|.+.++.. ++.. .-.+++|||.+|+.|.+.+|-.. .|+.
T Consensus 166 -----~----~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 218 (250)
T 3l5k_A 166 -----E----VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPD 218 (250)
T ss_dssp -----T----CCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred -----h----ccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 0 10222233344443 4432 22579999999999999999553 4443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.3e-07 Score=87.07 Aligned_cols=86 Identities=8% Similarity=0.041 Sum_probs=56.0
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
.+|++.+ .++++ ..+ ++|.+....++.+.+. +|+ |.+++++ ..+ .+..|.+.++..+
T Consensus 121 ~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~g~~f~~~~~~~-----------~~~----~~kp~~~~~~~~~ 183 (254)
T 3umc_A 121 PWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARH-AGLPWDMLLCAD-----------LFG----HYKPDPQVYLGAC 183 (254)
T ss_dssp ECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHH-HTCCCSEECCHH-----------HHT----CCTTSHHHHHHHH
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH-cCCCcceEEeec-----------ccc----cCCCCHHHHHHHH
Confidence 4555554 55554 555 5799999999999998 785 4444432 111 2334555555443
Q ss_pred CCCC----CeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 183 GETQ----PEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 183 ~~~~----~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
...+ -.+++|||.+|+.|.+.+|..+ .+|
T Consensus 184 ~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 184 RLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred HHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 3322 2579999999999999999876 455
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.9e-07 Score=84.67 Aligned_cols=85 Identities=16% Similarity=0.133 Sum_probs=61.6
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---hCCC-CC
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA---FGET-QP 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~-~~ 187 (504)
+++.++++|..+ |+|+.+...++.+++. +|++.++.. +..|.+.+++. ++.. .-
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~--------------------~kpk~~~~~~~~~~~g~~~~~ 119 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG--------------------QSNKLIAFSDLLEKLAIAPEN 119 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS--------------------CSCSHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC--------------------CCCCHHHHHHHHHHcCCCHHH
Confidence 677888899776 6899999999999999 999865432 11244444443 4422 22
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC-CCcchhc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKA 218 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~ 218 (504)
.+++|||.+|+++++.++..+++. ..+.++.
T Consensus 120 ~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~ 151 (188)
T 2r8e_A 120 VAYVGDDLIDWPVMEKVGLSVAVADAHPLLIP 151 (188)
T ss_dssp EEEEESSGGGHHHHTTSSEEEECTTSCTTTGG
T ss_pred EEEECCCHHHHHHHHHCCCEEEecCcCHHHHh
Confidence 568999999999999999999885 3444443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.2e-06 Score=85.68 Aligned_cols=52 Identities=25% Similarity=0.223 Sum_probs=41.6
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+..|...|+..+...++ .+++|||.||++|++.|+.++++. ..+++++.|.
T Consensus 208 ~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~ 264 (283)
T 3dao_A 208 KGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAK 264 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSS
T ss_pred CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcC
Confidence 345688888877655443 579999999999999999999994 6777887776
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=5e-07 Score=84.05 Aligned_cols=81 Identities=21% Similarity=0.189 Sum_probs=55.3
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++. +.+++ |..+ |+|++++..++.+.+. +|++ .+++++ + .+.-|.+.++.
T Consensus 85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~-------------~----~~Kp~p~~~~~ 145 (210)
T 2ah5_A 85 LFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSS-------------P----EAPHKADVIHQ 145 (210)
T ss_dssp ECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEEC-------------S----SCCSHHHHHHH
T ss_pred CCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHh-cCchhheeeeecCC-------------C----CCCCChHHHHH
Confidence 456554 46677 9776 7899999899999998 8874 333332 1 12235566555
Q ss_pred HhCCCCC----eEEEeCCCCCHHHHhhcccCe
Q 043920 181 AFGETQP----EIGLGDRQTDIPFMALCKEGY 208 (504)
Q Consensus 181 ~~~~~~~----~~aygDS~~DlpmL~~a~~~~ 208 (504)
.+...++ .+++|||.+|+.+.+.+|-..
T Consensus 146 ~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~ 177 (210)
T 2ah5_A 146 ALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp HHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred HHHHcCCCcccEEEECCCHHHHHHHHHCCCcE
Confidence 4433332 579999999999999999854
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.36 E-value=5.7e-07 Score=87.49 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=54.9
Q ss_pred cCHHH---HHHHhhC-CCEE-EEecCcHHHHHHHHHhhcCCc---EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHH---
Q 043920 109 LHPES---WRVFSSC-GKRC-VLTANPRIMVEAFLKDFLAAD---LVLGTEIATYKGRATGLVRDPGVLVGNKKADA--- 177 (504)
Q Consensus 109 ~~~~~---~~~~~~~-G~~v-vvSas~~~~v~~ia~~~Lg~d---~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~--- 177 (504)
.+|.+ ++.++++ |..+ ++|++....++.+.+. +|++ .+++++ -.+ .+..|.+.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~~f~~i~~~~-----------~~~----~~kp~~~~~~~ 178 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIKRPEYFITAN-----------DVK----QGKPHPEPYLK 178 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCCCCSSEECGG-----------GCS----SCTTSSHHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCCccCEEEEcc-----------cCC----CCCCChHHHHH
Confidence 34544 4467777 8655 6899999999999998 7864 222221 111 12223333
Q ss_pred HHHHhCC-------C-CCeEEEeCCCCCHHHHhhcccCeee
Q 043920 178 LLKAFGE-------T-QPEIGLGDRQTDIPFMALCKEGYLV 210 (504)
Q Consensus 178 l~~~~~~-------~-~~~~aygDS~~DlpmL~~a~~~~~V 210 (504)
+.+.++. . .-.+++|||.+|++|++.||..++.
T Consensus 179 ~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 179 GRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp HHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 3333443 2 2257999999999999999988654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=83.00 Aligned_cols=109 Identities=16% Similarity=0.130 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHHHcchhhhc---ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeC
Q 043920 88 LRVTDIESVARAVLPKFYAS---DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYK 156 (504)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~---~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~ 156 (504)
.+.+++.+..++++...... ..+|++ ++.++++|..+ |+|.+.+. ++.+.+. +|++ .+++++-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~---- 156 (263)
T 3k1z_A 83 QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGG-LGLREHFDFVLTSEA---- 156 (263)
T ss_dssp CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHH-TTCGGGCSCEEEHHH----
T ss_pred CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHh-CCcHHhhhEEEeecc----
Confidence 46677766666665543321 345555 45778899876 58988875 5888888 8864 3333321
Q ss_pred CeeeeeEeCCCCCCchhHHHHHH---HHhCCC-CCeEEEeCCC-CCHHHHhhcccCee-eCCC
Q 043920 157 GRATGLVRDPGVLVGNKKADALL---KAFGET-QPEIGLGDRQ-TDIPFMALCKEGYL-VPSK 213 (504)
Q Consensus 157 g~~tG~i~g~~~l~g~~Kv~~l~---~~~~~~-~~~~aygDS~-~DlpmL~~a~~~~~-Vnp~ 213 (504)
.+ .+.-|.+.++ +.++.. .-.+++|||. +|+.+.+.+|-.++ ++..
T Consensus 157 -------~~----~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~ 208 (263)
T 3k1z_A 157 -------AG----WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP 208 (263)
T ss_dssp -------HS----SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCS
T ss_pred -------cC----CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCC
Confidence 11 1112223333 333432 2257999996 99999999997654 4544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.5e-06 Score=79.76 Aligned_cols=87 Identities=16% Similarity=0.092 Sum_probs=54.3
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++.+ .++++ ..+ ++|++....++.+.+. +|++ .+++++. .+ .+..|.+.++.
T Consensus 101 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~-----------~~----~~kp~~~~~~~ 163 (234)
T 3u26_A 101 LYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEE-----------AG----FFKPHPRIFEL 163 (234)
T ss_dssp BCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHH-----------HT----BCTTSHHHHHH
T ss_pred cCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccc-----------cC----CCCcCHHHHHH
Confidence 4455544 66667 776 5899999999999998 8864 3333221 11 12223333333
Q ss_pred ---HhCCC-CCeEEEeCCC-CCHHHHhhcccCe-eeCC
Q 043920 181 ---AFGET-QPEIGLGDRQ-TDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 181 ---~~~~~-~~~~aygDS~-~DlpmL~~a~~~~-~Vnp 212 (504)
.++.. .-.+++|||. +|+.|++.+|..+ .|+.
T Consensus 164 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (234)
T 3u26_A 164 ALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDR 201 (234)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECS
T ss_pred HHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECC
Confidence 34432 2257999997 9999999999754 3443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.30 E-value=5.6e-06 Score=76.76 Aligned_cols=85 Identities=11% Similarity=0.076 Sum_probs=53.1
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET- 185 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~- 185 (504)
++++.++++|..+ ++|+++...++...+. +|++ .+++++- .|. ..|+. +=.+.+.+.+|-.
T Consensus 91 ~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~-------~~~-~KP~p----~~~~~a~~~lg~~p 157 (216)
T 3kbb_A 91 EALEFVKSKRIKLALATSTPQREALERLRR-LDLEKYFDVMVFGDQ-------VKN-GKPDP----EIYLLVLERLNVVP 157 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGG-------SSS-CTTST----HHHHHHHHHHTCCG
T ss_pred HHHHHHHHcCCCcccccCCcHHHHHHHHHh-cCCCccccccccccc-------cCC-CcccH----HHHHHHHHhhCCCc
Confidence 3455788899776 6899999999999998 8864 4444331 010 01111 1112222334432
Q ss_pred CCeEEEeCCCCCHHHHhhcccCee
Q 043920 186 QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 186 ~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
.-.+.+|||.+|+..-+.+|-..+
T Consensus 158 ~e~l~VgDs~~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 158 EKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp GGEEEEECSHHHHHHHHHTTCCCE
T ss_pred cceEEEecCHHHHHHHHHcCCcEE
Confidence 225789999999999999997643
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=85.37 Aligned_cols=52 Identities=21% Similarity=0.243 Sum_probs=40.4
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+..+...++ .+++|||.||++|++.|+.++++. ..+++++.|.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~ 250 (279)
T 4dw8_A 194 QGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAAD 250 (279)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCC
Confidence 455688877776544333 579999999999999999999985 5677887766
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=84.43 Aligned_cols=52 Identities=19% Similarity=0.232 Sum_probs=38.6
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...|+..+...++ .+++|||.||++|++.|+.++++ |..+++++.|.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~ 250 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQ 250 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcc
Confidence 345688888877655443 56999999999999999999998 56778887776
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=6.1e-07 Score=86.74 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=56.2
Q ss_pred CEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCCCC
Q 043920 122 KRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQTD 197 (504)
Q Consensus 122 ~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~~D 197 (504)
..++++ .....++.+.+. ++-. +-. .....|...-++.. .+..|...++..+...+ -.+++|||.||
T Consensus 158 ~ki~~~-~~~~~~~~~~~~-l~~~-~~~--~~~~~~~~~~ei~~----~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~ND 228 (274)
T 3fzq_A 158 HKICLW-SNEKVFDEVKDI-LQDK-MEL--AQRDISSQYYEIIQ----KDFHKGKAIKRLQERLGVTQKETICFGDGQND 228 (274)
T ss_dssp CEEEEE-CCHHHHHHHHHH-HGGG-EEE--EEEEGGGTEEEEEE----TTCSHHHHHHHHHHHHTCCSTTEEEECCSGGG
T ss_pred EEEEEE-cCHHHHHHHHHH-hhcc-eEE--EeccCCCceEEEee----CCCCHHHHHHHHHHHcCCCHHHEEEECCChhH
Confidence 455556 566677788777 6533 111 11111111122322 34568777776654333 25799999999
Q ss_pred HHHHhhcccCeeeC-CCcchhcccc
Q 043920 198 IPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 198 lpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
++|++.|+.++++. .++++++.|.
T Consensus 229 i~m~~~ag~~vam~na~~~~k~~A~ 253 (274)
T 3fzq_A 229 IVMFQASDVTIAMKNSHQQLKDIAT 253 (274)
T ss_dssp HHHHHTCSEEEEETTSCHHHHHHCS
T ss_pred HHHHHhcCceEEecCccHHHHHhhh
Confidence 99999999999984 5777877665
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.1e-06 Score=79.74 Aligned_cols=87 Identities=7% Similarity=-0.013 Sum_probs=53.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.+|++ ++.++ +|..+ |+|++....++...+. +|++..+. ..++ .+. . .++ -.+.+.+.++.
T Consensus 113 ~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~-------~i~~---~~k-p-~~~-~~~~~~~~l~~ 177 (251)
T 2pke_A 113 VIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQ-SGLSDLFP-------RIEV---VSE-K-DPQ-TYARVLSEFDL 177 (251)
T ss_dssp BCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHH-HSGGGTCC-------CEEE---ESC-C-SHH-HHHHHHHHHTC
T ss_pred cCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH-cCcHHhCc-------eeee---eCC-C-CHH-HHHHHHHHhCc
Confidence 44555 44666 88776 6899999999999888 78643211 1111 011 1 122 12233333443
Q ss_pred C-CCeEEEeCCC-CCHHHHhhcccCeee
Q 043920 185 T-QPEIGLGDRQ-TDIPFMALCKEGYLV 210 (504)
Q Consensus 185 ~-~~~~aygDS~-~DlpmL~~a~~~~~V 210 (504)
. .-.+++|||. +|+.|.+.+|..++.
T Consensus 178 ~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 178 PAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp CGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred CchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 2 2257999999 999999999988654
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.20 E-value=8.7e-07 Score=83.67 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=28.5
Q ss_pred cCHHHHH---HHhhCCCEEEEecCcHHHHHHHHHhhcCCcE
Q 043920 109 LHPESWR---VFSSCGKRCVLTANPRIMVEAFLKDFLAADL 146 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~ 146 (504)
++|++.+ .++++|...|+|+++...++.+.+. +|++.
T Consensus 97 ~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~-~gl~~ 136 (231)
T 2p11_A 97 VYPGALNALRHLGARGPTVILSDGDVVFQPRKIAR-SGLWD 136 (231)
T ss_dssp BCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHH-TTHHH
T ss_pred cCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHH-cCcHH
Confidence 5665544 6778884447899999999999999 89754
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.5e-06 Score=80.54 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=56.0
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc--EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD--LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
.+|++. +.++++ ..+ ++|.+....++.+.+. +|+. .+++++ ..+ .+..|.+.++..+
T Consensus 117 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~f~~~~~~~-----------~~~----~~kp~~~~~~~~~ 179 (254)
T 3umg_A 117 PWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKN-AGIPWDVIIGSD-----------INR----KYKPDPQAYLRTA 179 (254)
T ss_dssp BCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHH-HTCCCSCCCCHH-----------HHT----CCTTSHHHHHHHH
T ss_pred CCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHh-CCCCeeEEEEcC-----------cCC----CCCCCHHHHHHHH
Confidence 345554 456665 665 5899999999999998 8863 333322 111 2223445555544
Q ss_pred CCCCC----eEEEeCCCCCHHHHhhcccCee-eCC
Q 043920 183 GETQP----EIGLGDRQTDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 183 ~~~~~----~~aygDS~~DlpmL~~a~~~~~-Vnp 212 (504)
...++ .+++|||.+|+.|.+.+|..++ +|.
T Consensus 180 ~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 180 QVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp HHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred HHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 43333 5799999999999999998864 453
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.5e-05 Score=77.79 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=41.8
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+..+...++ .+++|||.||++|++.||.++++. ..+.+++.|.
T Consensus 199 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad 255 (290)
T 3dnp_A 199 KGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKAD 255 (290)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcC
Confidence 455788888877655444 569999999999999999999985 5677887776
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.14 E-value=5e-06 Score=77.65 Aligned_cols=91 Identities=10% Similarity=-0.018 Sum_probs=55.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcC--CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH--H
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLA--ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALL--K 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg--~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~--~ 180 (504)
.+|++ ++.+++ |..+ ++|.+....++...+. ++ +|.+++++- + + ... + ..+-....++ +
T Consensus 100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~-l~~~fd~i~~~~~-~------~-~~K--P-~~~~~~~~l~~~~ 166 (240)
T 3smv_A 100 AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK-LGVEFDHIITAQD-V------G-SYK--P-NPNNFTYMIDALA 166 (240)
T ss_dssp BCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT-TCSCCSEEEEHHH-H------T-SCT--T-SHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh-cCCccCEEEEccc-c------C-CCC--C-CHHHHHHHHHHHH
Confidence 45555 446667 7666 5899999999988887 76 466666541 1 0 001 1 1111112322 2
Q ss_pred HhCCC-CCeEEEeCCC-CCHHHHhhcccCee-eCC
Q 043920 181 AFGET-QPEIGLGDRQ-TDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~-~DlpmL~~a~~~~~-Vnp 212 (504)
.++.. .-.+++|||. +|+.|.+.+|..++ +|.
T Consensus 167 ~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 167 KAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp HTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred hcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence 23432 2257999996 99999999999765 443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.12 E-value=6.1e-06 Score=77.08 Aligned_cols=87 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|++.+ .++++|+.+ |+|+++. .++.+.+. +|+ |.+++++-. |. ..++. +-.+.+.+
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~-------~~-~Kp~~----~~~~~~~~ 161 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEI-------KA-VKPNP----KIFGFALA 161 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-------------------C----CHHHHHHH
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEecccc-------CC-CCCCH----HHHHHHHH
Confidence 5566644 677889877 5799877 47888888 885 445544311 00 01111 11222333
Q ss_pred HhCCCCCeEEEeCCCC-CHHHHhhcccCee-eC
Q 043920 181 AFGETQPEIGLGDRQT-DIPFMALCKEGYL-VP 211 (504)
Q Consensus 181 ~~~~~~~~~aygDS~~-DlpmL~~a~~~~~-Vn 211 (504)
.++... +++|||.+ |+...+.+|-..+ |+
T Consensus 162 ~~~~~~--~~vgD~~~~Di~~a~~aG~~~i~v~ 192 (220)
T 2zg6_A 162 KVGYPA--VHVGDIYELDYIGAKRSYVDPILLD 192 (220)
T ss_dssp HHCSSE--EEEESSCCCCCCCSSSCSEEEEEBC
T ss_pred HcCCCe--EEEcCCchHhHHHHHHCCCeEEEEC
Confidence 345433 89999998 9999998887654 44
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=98.10 E-value=4.4e-05 Score=73.51 Aligned_cols=88 Identities=14% Similarity=0.061 Sum_probs=55.2
Q ss_pred ccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 108 DLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 108 ~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
.++|++.+ .+++ |.++ |+|+++...++.+.+. +|++ .+++++- .+ .+.-+.+.++
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~-----------~~----~~KP~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGE-----------QK----EEKPAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGG-----------SS----SCTTCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCC-----------CC----CCCCCHHHHH
Confidence 36677766 4554 5666 6899999999999998 8864 3333221 00 1111223333
Q ss_pred HH---hCCC-CCeEEEeCC-CCCHHHHhhccc--CeeeCC
Q 043920 180 KA---FGET-QPEIGLGDR-QTDIPFMALCKE--GYLVPS 212 (504)
Q Consensus 180 ~~---~~~~-~~~~aygDS-~~DlpmL~~a~~--~~~Vnp 212 (504)
.. ++.. .-.+.+||| .+|+.+.+.+|- .++|+.
T Consensus 184 ~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~ 223 (260)
T 2gfh_A 184 HCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINK 223 (260)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred HHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence 32 3422 225789996 999999999997 567764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.8e-05 Score=71.43 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=59.9
Q ss_pred hcCCCHHHHHHHHHHHcchhhh----cccCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeE
Q 043920 85 FVGLRVTDIESVARAVLPKFYA----SDLHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEI 152 (504)
Q Consensus 85 ~~G~~~~~l~~~~~~~~~~~~~----~~~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l 152 (504)
-.|++.++.+++.+++...+.. -..+|++.+ .++++ ..+ ++|.+... .+. +|+ |.+++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~-~~l~~~f~~~~~~~~ 150 (230)
T 3vay_A 78 DAGYDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRR-LGLADYFAFALCAED 150 (230)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGG-STTGGGCSEEEEHHH
T ss_pred HhCCChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhh-cCcHHHeeeeEEccc
Confidence 3578887777666655443211 124555544 56666 665 58887755 355 665 33443321
Q ss_pred EEeCCeeeeeEeCCCCCCchhHHHHHHHH---hCCC-CCeEEEeCCC-CCHHHHhhcccCee-eCC
Q 043920 153 ATYKGRATGLVRDPGVLVGNKKADALLKA---FGET-QPEIGLGDRQ-TDIPFMALCKEGYL-VPS 212 (504)
Q Consensus 153 ~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~-~~~~aygDS~-~DlpmL~~a~~~~~-Vnp 212 (504)
.+ .+..|.+.++.. ++.. .-.+++|||. +|+.|.+.+|-..+ |+.
T Consensus 151 -----------~~----~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 151 -----------LG----IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp -----------HT----CCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred -----------cC----CCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcC
Confidence 11 122234444433 3322 2256899997 99999999998654 444
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.9e-06 Score=84.29 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=41.9
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+..+...++ .+++|||.||++|++.|+.++++. ..+++++.|.
T Consensus 206 ~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~ 262 (285)
T 3pgv_A 206 GGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP 262 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCT
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCC
Confidence 355688888877655444 569999999999999999999995 6778888776
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.02 E-value=6.2e-06 Score=76.43 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=66.9
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----P 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~ 187 (504)
++++++++|..+ |+|++....++.+++. +|++.++... ..|...++++....+ -
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~--------------------k~k~~~~~~~~~~~~~~~~~ 118 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ--------------------DDKVQAYYDICQKLAIAPEQ 118 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC--------------------SSHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC--------------------CCcHHHHHHHHHHhCCCHHH
Confidence 467888999776 6899999999999999 9998654211 236666666544322 2
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+++|||.+|++|++.|+.++++. ..+.++..|.
T Consensus 119 ~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad 153 (195)
T 3n07_A 119 TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRAN 153 (195)
T ss_dssp EEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCC
Confidence 568999999999999999999984 5666776665
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.4e-05 Score=77.24 Aligned_cols=52 Identities=27% Similarity=0.307 Sum_probs=41.8
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+..|...|+..+...++ .+++|||.||++|++.|+.++++. ..+++++.|.
T Consensus 225 ~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad 281 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAAN 281 (304)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhcc
Confidence 455688888887655444 569999999999999999999985 5777887776
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.91 E-value=4.5e-05 Score=72.06 Aligned_cols=82 Identities=15% Similarity=0.052 Sum_probs=51.0
Q ss_pred Ee-cCcHHHHHHHHHhhcC--CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC----CeEEEeCCCCCH
Q 043920 126 LT-ANPRIMVEAFLKDFLA--ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQ----PEIGLGDRQTDI 198 (504)
Q Consensus 126 vS-as~~~~v~~ia~~~Lg--~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~----~~~aygDS~~Dl 198 (504)
++ +.....++.+.+. ++ ++.+ + |....++.. .+..|...++......+ -.+++|||.+|+
T Consensus 116 ~~~~~~~~~~~~~~~~-~~~~~~~~-~-------~~~~~ei~~----~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~ 182 (231)
T 1wr8_A 116 MRETINVETVREIINE-LNLNLVAV-D-------SGFAIHVKK----PWINKGSGIEKASEFLGIKPKEVAHVGDGENDL 182 (231)
T ss_dssp CTTTSCHHHHHHHHHH-TTCSCEEE-E-------CSSCEEEEC----TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGH
T ss_pred ECCCCCHHHHHHHHHh-cCCcEEEE-e-------cCcEEEEec----CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 44 3366778888887 66 3321 1 112223332 34457777766543322 256999999999
Q ss_pred HHHhhcccCeeeC-CCcchhccc
Q 043920 199 PFMALCKEGYLVP-SKPEVKAVT 220 (504)
Q Consensus 199 pmL~~a~~~~~Vn-p~~~l~~~A 220 (504)
+|++.++.++++. ..+.++..|
T Consensus 183 ~~~~~ag~~v~~~~~~~~~~~~a 205 (231)
T 1wr8_A 183 DAFKVVGYKVAVAQAPKILKENA 205 (231)
T ss_dssp HHHHHSSEEEECTTSCHHHHTTC
T ss_pred HHHHHcCCeEEecCCCHHHHhhC
Confidence 9999999998884 455565433
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=97.90 E-value=9.3e-06 Score=73.39 Aligned_cols=85 Identities=9% Similarity=0.014 Sum_probs=64.5
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHH--hhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC--
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLK--DFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP-- 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~--~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~-- 187 (504)
++++++++|..+ |+|+. ..++.+++ . +|++ ++. | +..|.+.++++....++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~-lgi~-~~~-------g-------------~~~K~~~l~~~~~~~gi~~ 99 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALK-LDCK-TEV-------S-------------VSDKLATVDEWRKEMGLCW 99 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTC-CCCC-EEC-------S-------------CSCHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhC-CCcE-EEE-------C-------------CCChHHHHHHHHHHcCcCh
Confidence 567788899876 68998 68888999 6 6776 321 1 12488888777654443
Q ss_pred --eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 188 --EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 188 --~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.+++|||.+|++|++.|+.++++ |..+.++..|.
T Consensus 100 ~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad 136 (168)
T 3ewi_A 100 KEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVG 136 (168)
T ss_dssp GGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCS
T ss_pred HHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCC
Confidence 46899999999999999999999 56777887776
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=2.5e-06 Score=82.84 Aligned_cols=85 Identities=15% Similarity=0.146 Sum_probs=61.6
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
.++|++ ++.++++|..+ ++|+..+..++.+++. +|++++++.- ..+.|.+.++++-.
T Consensus 136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~------------------~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNL------------------SPEDKVRIIEKLKQ 196 (263)
Confidence 355655 44777889766 6899999999999999 8987655422 12346666666532
Q ss_pred CCCCeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 184 ETQPEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 184 ~~~~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
...-.+++|||.+|+++++.++-.++..
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~va~g 224 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVSVAMG 224 (263)
Confidence 2233568999999999999999877665
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.73 E-value=2.8e-05 Score=73.58 Aligned_cols=107 Identities=22% Similarity=0.146 Sum_probs=70.3
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEE--Ee-CCeee---e-----------------------
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIA--TY-KGRAT---G----------------------- 161 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~--~~-~g~~t---G----------------------- 161 (504)
+++.++++|..+ ++||-+...++++++. +|++. ++|..-. ++ +|... .
T Consensus 30 ~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~ 108 (227)
T 1l6r_A 30 SIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTN 108 (227)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGG
T ss_pred HHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCccccc
Confidence 345566789776 5899999999999999 89874 5554321 11 22211 0
Q ss_pred ----------------------------e-EeCCC-----CCCchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhh
Q 043920 162 ----------------------------L-VRDPG-----VLVGNKKADALLKAFGETQP----EIGLGDRQTDIPFMAL 203 (504)
Q Consensus 162 ----------------------------~-i~g~~-----~l~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~ 203 (504)
. ..+++ . .|..|...++......++ .+++|||.||++|++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~-~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ 187 (227)
T 1l6r_A 109 RWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMN-RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL 187 (227)
T ss_dssp GGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEE-TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS
T ss_pred cceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEec-CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH
Confidence 0 00000 1 456788887776544332 5699999999999999
Q ss_pred cccCeeeC-CCcchhcccc
Q 043920 204 CKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 204 a~~~~~Vn-p~~~l~~~A~ 221 (504)
|+.++++. ..+.++..|.
T Consensus 188 ag~~va~~n~~~~~k~~a~ 206 (227)
T 1l6r_A 188 PVRKACPANATDNIKAVSD 206 (227)
T ss_dssp SSEEEECTTSCHHHHHHCS
T ss_pred cCceEEecCchHHHHHhCC
Confidence 99999995 5566765554
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00014 Score=80.45 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=73.8
Q ss_pred cccCH---HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHP---ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~---~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.+++ ++++.++++|..+ ++||-....+++++++ +|++++.+. + ..++|.+.++++.
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~v~a~-----------------~-~P~~K~~~v~~l~ 613 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKKVVAE-----------------I-MPEDKSRIVSELK 613 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCCEECS-----------------C-CHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCEEEEe-----------------c-CHHHHHHHHHHHH
Confidence 34555 4566888999776 5899999999999999 999865441 2 4578999988876
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.+.....++||+.||.|||+.|+..+++.. .+..+..|.
T Consensus 614 ~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD 653 (736)
T 3rfu_A 614 DKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAG 653 (736)
T ss_dssp HHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCS
T ss_pred hcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCC
Confidence 554556789999999999999999999964 444554454
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00015 Score=79.23 Aligned_cols=86 Identities=23% Similarity=0.308 Sum_probs=69.1
Q ss_pred cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.++|++ ++.++++|..+ ++||-....++.++++ +|++.+.+. + ..++|.+.++++.
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~~~~~-----------------~-~P~~K~~~v~~l~ 516 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKLQ 516 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHHT
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEe-----------------C-CHHhHHHHHHHHh
Confidence 3455544 55888999776 5899999999999999 999865541 2 3457999999986
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.. +...+.||+.||.|||+.|+..+++..
T Consensus 517 ~~-~~v~~vGDg~ND~~al~~A~vgiamg~ 545 (645)
T 3j08_A 517 AK-EVVAFVGDGINDAPALAQADLGIAVGS 545 (645)
T ss_dssp TT-CCEEEEECSSSCHHHHHHSSEEEEECC
T ss_pred hC-CeEEEEeCCHhHHHHHHhCCEEEEeCC
Confidence 65 556789999999999999999999964
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00028 Score=68.04 Aligned_cols=90 Identities=10% Similarity=0.114 Sum_probs=53.5
Q ss_pred ccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcC---C----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHH
Q 043920 108 DLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLA---A----DLVLGTEIATYKGRATGLVRDPGVLVGNKKAD 176 (504)
Q Consensus 108 ~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg---~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~ 176 (504)
.++|++. +.++++|.++ |+|.+....++.+.+. ++ + |.+++++ .| ..|+. +=.+
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~--------~~--~KP~p----~~~~ 194 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTK--------IG--HKVES----ESYR 194 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGG--------GC--CTTCH----HHHH
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecC--------CC--CCCCH----HHHH
Confidence 3566654 4677899776 6899998888888775 43 4 4444331 11 11110 1112
Q ss_pred HHHHHhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 177 ALLKAFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 177 ~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
.+.+.++.. .-.+.+|||.+|+.--+.+|-. +.|+.
T Consensus 195 ~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~ 232 (261)
T 1yns_A 195 KIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVR 232 (261)
T ss_dssp HHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 222333432 2257899999999999999865 45543
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=70.54 Aligned_cols=90 Identities=11% Similarity=0.136 Sum_probs=56.5
Q ss_pred ccCHHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhc--C-------------CcEEEeeeEEEeCCeeeeeEeCCCCCCc
Q 043920 108 DLHPESWRVFSSCGKRC-VLTANPRIMVEAFLKDFL--A-------------ADLVLGTEIATYKGRATGLVRDPGVLVG 171 (504)
Q Consensus 108 ~~~~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~L--g-------------~d~vigt~l~~~~g~~tG~i~g~~~l~g 171 (504)
.++|++.+.+++ |.++ |+|.++...++.+.+. + | ++.++.+. .+|. .|+.
T Consensus 125 ~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~-------~~g~--KP~p--- 190 (253)
T 2g80_A 125 PVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDIN-------TSGK--KTET--- 190 (253)
T ss_dssp CCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHH-------HHCC--TTCH---
T ss_pred CCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeee-------ccCC--CCCH---
Confidence 467899998888 9665 7899999999988887 6 5 55444331 1121 2211
Q ss_pred hhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCe-eeCC
Q 043920 172 NKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 172 ~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vnp 212 (504)
+=-..+.+.++.. .-.+.+|||..|+.--+.+|-.. .|+.
T Consensus 191 -~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 191 -QSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp -HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred -HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 1112222334432 22578999999999888888664 4544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00022 Score=79.05 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=72.8
Q ss_pred cccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHh
Q 043920 107 SDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAF 182 (504)
Q Consensus 107 ~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~ 182 (504)
+.++|++ ++.+++.|..+ ++||-....++.++++ +|++.+++. + ..++|.+.++++.
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~~~~~-----------------~-~P~~K~~~v~~l~ 594 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKLQ 594 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHHT
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCcEEEcc-----------------C-CHHHHHHHHHHHh
Confidence 3456555 55888999776 5899999999999999 999865542 1 3457999999986
Q ss_pred CCCCCeEEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 183 GETQPEIGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 183 ~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.. ....+.||+.||.|||+.|+..+++.. .+..+..|.
T Consensus 595 ~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD 633 (723)
T 3j09_A 595 AK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGD 633 (723)
T ss_dssp TT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSS
T ss_pred cC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCC
Confidence 65 556789999999999999999999963 333443343
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00022 Score=74.77 Aligned_cols=89 Identities=8% Similarity=0.041 Sum_probs=52.2
Q ss_pred cCHHHHH---HHhhCCCEE-EEecC------cHHHHHHHHHhhcC-CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTAN------PRIMVEAFLKDFLA-ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADA 177 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas------~~~~v~~ia~~~Lg-~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~ 177 (504)
.+|++.+ .++++|.++ |+|.+ ....++.....+.. +|.+++++-. + .+.-+.+.
T Consensus 101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~-----------~----~~KP~p~~ 165 (555)
T 3i28_A 101 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQV-----------G----MVKPEPQI 165 (555)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHH-----------T----CCTTCHHH
T ss_pred cChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecccc-----------C----CCCCCHHH
Confidence 5676655 678899776 68988 55555544333112 5777765411 0 11111223
Q ss_pred HHH---HhCCC-CCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 178 LLK---AFGET-QPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 178 l~~---~~~~~-~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.+. .++.. .-.+++|||.+|+...+.+|-..+.-.
T Consensus 166 ~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~ 204 (555)
T 3i28_A 166 YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 204 (555)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence 332 23432 225689999999999999998765543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.43 E-value=2.8e-05 Score=72.98 Aligned_cols=39 Identities=21% Similarity=0.165 Sum_probs=27.4
Q ss_pred chhHHHHHHHHhCCCCC----eEEEeCC-CCCHHHHhhcccCee
Q 043920 171 GNKKADALLKAFGETQP----EIGLGDR-QTDIPFMALCKEGYL 209 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~aygDS-~~DlpmL~~a~~~~~ 209 (504)
|..|...++..+...++ .+++||| .+|++|++.||..++
T Consensus 175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~ 218 (250)
T 2c4n_A 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI 218 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEE
Confidence 34455555554433222 5699999 799999999998854
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00029 Score=64.63 Aligned_cols=88 Identities=17% Similarity=0.254 Sum_probs=62.9
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---hCCC-CC
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA---FGET-QP 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~-~~ 187 (504)
++++++++|..+ |+|+++...++.+++. +|++.++... . . |.+.++.. ++.. .-
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-------------k--p-----k~~~~~~~~~~~~~~~~~ 112 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-------------V--D-----KRSAYQHLKKTLGLNDDE 112 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-------------S--S-----CHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-------------C--C-----hHHHHHHHHHHhCCCHHH
Confidence 366788899776 6899999999999999 9998644321 1 1 33333333 3322 22
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.+++|||.+|++|++.++.++++. ..+.++..|.
T Consensus 113 ~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad 147 (191)
T 3n1u_A 113 FAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFAD 147 (191)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSS
T ss_pred EEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCC
Confidence 568999999999999999999885 4555665555
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00064 Score=66.38 Aligned_cols=85 Identities=24% Similarity=0.310 Sum_probs=65.5
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
.++|++ ++.++++|..+ |+|+++...++.+++. +|++.++.. + .++.|...++++-.
T Consensus 163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~-----------------i-~~~~K~~~~~~l~~ 223 (287)
T 3a1c_A 163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAE-----------------V-LPHQKSEEVKKLQA 223 (287)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECS-----------------C-CTTCHHHHHHHHTT
T ss_pred ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeee-----------------c-ChHHHHHHHHHHhc
Confidence 356655 55778899776 6899999999999999 898754431 1 24468888887644
Q ss_pred CCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 184 ETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 184 ~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
. .-.+++|||.+|+++++.||..+++..
T Consensus 224 ~-~~~~~vGDs~~Di~~a~~ag~~v~~~~ 251 (287)
T 3a1c_A 224 K-EVVAFVGDGINDAPALAQADLGIAVGS 251 (287)
T ss_dssp T-CCEEEEECTTTCHHHHHHSSEEEEECC
T ss_pred C-CeEEEEECCHHHHHHHHHCCeeEEeCC
Confidence 4 446799999999999999999988753
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00051 Score=65.35 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=51.1
Q ss_pred cCHHHH---HHHhhCCCEEE-EecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPESW---RVFSSCGKRCV-LTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
+.|.+. +.++++|..+. +|++.. +..+.+. +|+ |.+++++-. |. ..|+. +=...+.+
T Consensus 117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~-------~~-~KP~p----~~~~~a~~ 181 (250)
T 4gib_A 117 ILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNH-LGISDKFDFIADAGKC-------KN-NKPHP----EIFLMSAK 181 (250)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-HTCGGGCSEECCGGGC-------CS-CTTSS----HHHHHHHH
T ss_pred cchhHHHHHHHHHhcccccccccccch--hhhHhhh-cccccccceeeccccc-------CC-CCCcH----HHHHHHHH
Confidence 455554 47788998775 455543 4556777 786 444443310 00 01111 11122223
Q ss_pred HhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeCCCcch
Q 043920 181 AFGET-QPEIGLGDRQTDIPFMALCKE-GYLVPSKPEV 216 (504)
Q Consensus 181 ~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~l 216 (504)
.++.. .-.+++|||.+|+..-+.||- .+.|+....+
T Consensus 182 ~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 219 (250)
T 4gib_A 182 GLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL 219 (250)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT
T ss_pred HhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh
Confidence 34432 225789999999999999996 4566543334
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00057 Score=65.79 Aligned_cols=78 Identities=13% Similarity=0.020 Sum_probs=48.6
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcH----HHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPR----IMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~----~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
.+|.+ ++.++++|..+ +||+-++ ..++..++. +|++.+-...+-...+ ...|..+.++
T Consensus 102 ~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~-------------~~~K~~~r~~ 167 (260)
T 3pct_A 102 AIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKD-------------KSNKSVRFKQ 167 (260)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESS-------------CSSSHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCC-------------CCChHHHHHH
Confidence 44555 44778899877 5898865 488888888 8986311101211111 1236666666
Q ss_pred HhC-CCCCeEEEeCCCCCHHH
Q 043920 181 AFG-ETQPEIGLGDRQTDIPF 200 (504)
Q Consensus 181 ~~~-~~~~~~aygDS~~Dlpm 200 (504)
... ...+.+.+||+.+|++.
T Consensus 168 L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 168 VEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp HHTTTCEEEEEEESSGGGGCG
T ss_pred HHhcCCCEEEEECCChHHcCc
Confidence 554 34455579999999987
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.002 Score=74.11 Aligned_cols=107 Identities=13% Similarity=0.056 Sum_probs=69.4
Q ss_pred HHHHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCcEEEeee-----------EEE--e----CCeeeee-----------
Q 043920 112 ESWRVFSSCGKRCV-LTANPRIMVEAFLKDFLAADLVLGTE-----------IAT--Y----KGRATGL----------- 162 (504)
Q Consensus 112 ~~~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~vigt~-----------l~~--~----~g~~tG~----------- 162 (504)
++++.++++|++++ +||-...-+.+++++ +|++.--... ... . ....+|.
T Consensus 611 ~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~ 689 (1034)
T 3ixz_A 611 DAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELV 689 (1034)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHH
Confidence 34557889998875 899999999999999 9983100000 000 0 0011111
Q ss_pred ---------EeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC--CCcchhcccc
Q 043920 163 ---------VRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP--SKPEVKAVTC 221 (504)
Q Consensus 163 ---------i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn--p~~~l~~~A~ 221 (504)
+-. .+ ..++|.+.++.+-.......+.||+.||.|||+.|+..+++. ..+..+..|.
T Consensus 690 ~~~~~~~~~v~a-r~-~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD 757 (1034)
T 3ixz_A 690 EALRTHPEMVFA-RT-SPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAAD 757 (1034)
T ss_pred HHHHhCCceEEE-ec-CHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcC
Confidence 111 12 346788777776544445668999999999999999999995 5666666555
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0006 Score=65.74 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=47.3
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcH----HHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPR----IMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~----~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
..|.+ ++.++++|..+ +||+-++ ..++..++. +|++.+-...+...++ ...|..++++
T Consensus 102 ~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~-------------~~~K~~~r~~ 167 (262)
T 3ocu_A 102 AVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKD-------------KSAKAARFAE 167 (262)
T ss_dssp ECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESS-------------CSCCHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCC-------------CCChHHHHHH
Confidence 44555 44778899877 5898765 478888888 8985211001211111 1236556555
Q ss_pred HhCC-CCCeEEEeCCCCCHHH
Q 043920 181 AFGE-TQPEIGLGDRQTDIPF 200 (504)
Q Consensus 181 ~~~~-~~~~~aygDS~~Dlpm 200 (504)
.... ..+.+.+||+.+|++.
T Consensus 168 l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 168 IEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp HHHTTEEEEEEEESSGGGGCS
T ss_pred HHhcCCCEEEEECCChHHhcc
Confidence 5433 3445579999999986
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00028 Score=65.60 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=55.4
Q ss_pred HHHHHHhhCCCEE-EEecCc---------------HHHHHHHHHhhcCCc--EEEeeeEEEeCCeeeeeEeCCCCCCchh
Q 043920 112 ESWRVFSSCGKRC-VLTANP---------------RIMVEAFLKDFLAAD--LVLGTEIATYKGRATGLVRDPGVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~---------------~~~v~~ia~~~Lg~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~ 173 (504)
++++.++++|..+ |+|++. ...++.+.+. +|++ .++.+.-. .++ .+|..... +..+.-
T Consensus 57 e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~f~~~~~~~~~-~~~-~~~~~~~~-~~~~KP 132 (211)
T 2gmw_A 57 DAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVDLDGIYYCPHH-PQG-SVEEFRQV-CDCRKP 132 (211)
T ss_dssp HHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCCCSEEEEECCB-TTC-SSGGGBSC-CSSSTT
T ss_pred HHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCceEEEEECCcC-CCC-cccccCcc-CcCCCC
Confidence 3455778899776 589998 4788888888 8864 43322210 011 11111010 112222
Q ss_pred HHHHHHHH---hCCC-CCeEEEeCCCCCHHHHhhcccC--eeeCC
Q 043920 174 KADALLKA---FGET-QPEIGLGDRQTDIPFMALCKEG--YLVPS 212 (504)
Q Consensus 174 Kv~~l~~~---~~~~-~~~~aygDS~~DlpmL~~a~~~--~~Vnp 212 (504)
|...++.. ++.. .-.+++|||.+|+.+.+.+|-. +.|..
T Consensus 133 ~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~ 177 (211)
T 2gmw_A 133 HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRT 177 (211)
T ss_dssp SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESS
T ss_pred CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEec
Confidence 33343333 3321 2257899999999999999976 45654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=62.46 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=48.9
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLK 180 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~ 180 (504)
+.|.+ ++.++++|..+ ++|++.. .+.+.+. +|++ .+++++- + |. ..|+. +=....-+
T Consensus 96 ~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~-~------~~-~KP~p----~~~~~a~~ 160 (243)
T 4g9b_A 96 VLPGIRSLLADLRAQQISVGLASVSLN--APTILAA-LELREFFTFCADASQ-L------KN-SKPDP----EIFLAACA 160 (243)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGG-C------SS-CTTST----HHHHHHHH
T ss_pred ccccHHHHHHhhhcccccceecccccc--hhhhhhh-hhhcccccccccccc-c------cC-CCCcH----HHHHHHHH
Confidence 45555 44778899877 4677754 4666777 7863 3433331 0 00 01111 11112222
Q ss_pred HhCCCC-CeEEEeCCCCCHHHHhhcccC-eeeC
Q 043920 181 AFGETQ-PEIGLGDRQTDIPFMALCKEG-YLVP 211 (504)
Q Consensus 181 ~~~~~~-~~~aygDS~~DlpmL~~a~~~-~~Vn 211 (504)
.+|... -.+.+|||.+|+..-+.+|-. +.|+
T Consensus 161 ~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 161 GLGVPPQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 344322 257899999999999999864 3454
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0015 Score=73.97 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=69.7
Q ss_pred ccCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCcE-EE-eeeEEEe-CCeeee----------eEeCCCCCC
Q 043920 108 DLHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAADL-VL-GTEIATY-KGRATG----------LVRDPGVLV 170 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~-vi-gt~l~~~-~g~~tG----------~i~g~~~l~ 170 (504)
.++|++ ++.+++.|.+++ +||-....++.+|++ +|++. ++ +.++.+. ++..++ .+-. .+ .
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~a-rv-~ 611 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFA-EV-F 611 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEE-SC-C
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEE-Ee-C
Confidence 456665 457889997774 899999999999999 99952 11 0000000 000000 0111 12 4
Q ss_pred chhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 171 GNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
.++|.+.++.+........+.||+.||.|||+.|+..+++..
T Consensus 612 P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~ 653 (920)
T 1mhs_A 612 PQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG 653 (920)
T ss_dssp STHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETT
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccccc
Confidence 578999999987654456689999999999999999999985
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.99 E-value=2.8e-05 Score=72.85 Aligned_cols=86 Identities=19% Similarity=0.102 Sum_probs=45.5
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcC--CcEE-EeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLA--ADLV-LGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP 187 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg--~d~v-igt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~ 187 (504)
++++.++++|+.+ |+|+++...++.+.+. |. ++.+ .+.... .+.+ ..+ ..+...+.+++ ++ +
T Consensus 95 e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~-l~~~f~~i~~~~~~~----~~~~--~KP---~p~~~~~~~~~-~g---~ 160 (211)
T 2b82_A 95 QLIDMHVRRGDAIFFVTGRSPTKTETVSKT-LADNFHIPATNMNPV----IFAG--DKP---GQNTKSQWLQD-KN---I 160 (211)
T ss_dssp HHHHHHHHHTCEEEEEECSCCCSSCCHHHH-HHHHTTCCTTTBCCC----EECC--CCT---TCCCSHHHHHH-TT---E
T ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HHHhcCccccccchh----hhcC--CCC---CHHHHHHHHHH-CC---C
Confidence 4456788899877 6899865433333322 21 2322 121110 0111 011 11222233333 33 3
Q ss_pred eEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 188 EIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
.+.+|||.+|+...+.+|-.. .|+
T Consensus 161 ~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 161 RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 778999999999999999754 344
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0019 Score=74.04 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=69.3
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeee------------------EeC
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGL------------------VRD 165 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~------------------i~g 165 (504)
.++|++ ++.+++.|.++ ++||-....++.+|++ +|++.- ..+ +.+..++|. +-.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~-~~~--i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~ 678 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGE-NEE--VADRAYTGREFDDLPLAEQREACRRACCFA 678 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCT-TCC--CTTTEEEHHHHHTSCHHHHHHHHHHCCEEE
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCC-CCc--ccceEEEchhhhhCCHHHHHHHHhhCcEEE
Confidence 345544 55888999777 5899999999999999 998420 000 012233331 111
Q ss_pred CCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 166 PGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 166 ~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
. + ..++|.+.++.+........+.||+.||.|||+.|+..+++.
T Consensus 679 r-~-~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 679 R-V-EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp S-C-CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred E-e-CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 1 2 356899999988765445668999999999999999999996
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0018 Score=74.52 Aligned_cols=107 Identities=15% Similarity=0.052 Sum_probs=70.1
Q ss_pred HHHHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCcEEEeeeE---------EE-----e---CCeeeee-----------
Q 043920 112 ESWRVFSSCGKRCV-LTANPRIMVEAFLKDFLAADLVLGTEI---------AT-----Y---KGRATGL----------- 162 (504)
Q Consensus 112 ~~~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~vigt~l---------~~-----~---~g~~tG~----------- 162 (504)
++++.+++.|.+++ +||-....+..+|++ +|++.--+..+ .+ + ...++|.
T Consensus 606 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~ 684 (1028)
T 2zxe_A 606 DAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684 (1028)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHH
Confidence 34668889998774 899999999999999 99851000000 00 0 0011221
Q ss_pred ---------EeCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC--CCcchhcccc
Q 043920 163 ---------VRDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP--SKPEVKAVTC 221 (504)
Q Consensus 163 ---------i~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn--p~~~l~~~A~ 221 (504)
+-. .+ ..++|.+.++.+........+.||+.||.|||+.|+..+++. ..+..+..|.
T Consensus 685 ~~~~~~~~~v~a-r~-~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD 752 (1028)
T 2zxe_A 685 DILHYHTEIVFA-RT-SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAAD 752 (1028)
T ss_dssp HHHHHCSEEEEE-SC-CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCS
T ss_pred HHHhhCCcEEEE-Ec-CHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcC
Confidence 111 12 457898888877554455678999999999999999999997 3444444444
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0018 Score=62.36 Aligned_cols=33 Identities=12% Similarity=0.006 Sum_probs=22.8
Q ss_pred HHHHHHhhCCCEE-EEecCc---HHHHHHHHHhhcCCc
Q 043920 112 ESWRVFSSCGKRC-VLTANP---RIMVEAFLKDFLAAD 145 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~---~~~v~~ia~~~Lg~d 145 (504)
++++.++++|..+ |+|+.+ ...+....+. +|++
T Consensus 108 e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~ 144 (258)
T 2i33_A 108 DFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAP 144 (258)
T ss_dssp HHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCS
T ss_pred HHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCC
Confidence 3455778899877 589988 3445555566 7876
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0001 Score=70.04 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=29.0
Q ss_pred hhHHHHHHHHhCCCCC----eEEEeCCC-CCHHHHhhcccCe-eeCC
Q 043920 172 NKKADALLKAFGETQP----EIGLGDRQ-TDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 172 ~~Kv~~l~~~~~~~~~----~~aygDS~-~DlpmL~~a~~~~-~Vnp 212 (504)
..|...++..+...++ .+++|||. +|+.|.+.+|-.. .|+.
T Consensus 179 Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~ 225 (259)
T 2ho4_A 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKT 225 (259)
T ss_dssp TTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 3456666666554443 56999998 9999999999654 4543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0021 Score=72.64 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=68.3
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEEEeCCeeeee-------------------E
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIATYKGRATGL-------------------V 163 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~~~~g~~tG~-------------------i 163 (504)
.++|++ ++.+++.|.++ ++||-....++.+|++ +|++. ++. +..++|. +
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~------~~~l~g~~~~~~~~~~~l~~~~~~~~v 560 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYP------SSALLGTHKDANLASIPVEELIEKADG 560 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCST------TSSCCBGGGGTTSCCSCHHHHHHTSCC
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCC------cceeeccccccccchhHHHHHHhhCcE
Confidence 346665 45788999665 5999999999999999 99842 111 1111221 0
Q ss_pred eCCCCCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCC
Q 043920 164 RDPGVLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPS 212 (504)
Q Consensus 164 ~g~~~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp 212 (504)
-. .+ ..++|.+.++++........+.||+.||.|||+.|+..+++..
T Consensus 561 ~a-rv-~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~ 607 (885)
T 3b8c_A 561 FA-GV-FPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607 (885)
T ss_dssp EE-CC-CHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSS
T ss_pred EE-EE-CHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCC
Confidence 11 12 4578999998876543445579999999999999999999984
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.00081 Score=64.15 Aligned_cols=52 Identities=23% Similarity=0.330 Sum_probs=40.8
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++..+...++ .+++|||.||++||+.|+.++++ |..+.+++.|.
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~ 236 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVAD 236 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCS
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCC
Confidence 455788888776543333 57999999999999999999999 56777887665
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0013 Score=62.78 Aligned_cols=51 Identities=18% Similarity=0.294 Sum_probs=37.5
Q ss_pred chhHHHHHHHHhCCC---C--CeEEEeCCCCCHHHHhhcccCeee-CCC-cchhcccc
Q 043920 171 GNKKADALLKAFGET---Q--PEIGLGDRQTDIPFMALCKEGYLV-PSK-PEVKAVTC 221 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~---~--~~~aygDS~~DlpmL~~a~~~~~V-np~-~~l~~~A~ 221 (504)
|..|...|+.++... + -.+|+|||.||++||+.|+.++++ |.. ++++..|.
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~ 234 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSS 234 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESS
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhce
Confidence 336877777765432 2 246999999999999999999999 444 56776554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0021 Score=61.42 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=41.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...|+..+...++ .+++|||.||++|++.|+.++++ |..+++++.|.
T Consensus 191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad 247 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVAD 247 (268)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcC
Confidence 455788888877655443 56999999999999999999999 56777887776
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.005 Score=55.71 Aligned_cols=84 Identities=13% Similarity=0.012 Sum_probs=55.2
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCc-HHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANP-RIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~-~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
++|++ ++.++++|..+ |+|+++ ...++.+.+. +|++..+..... .+..|.+.+++.+.
T Consensus 69 ~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~----------------~~~~k~~~~~~~~~ 131 (187)
T 2wm8_A 69 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREI----------------YPGSKITHFERLQQ 131 (187)
T ss_dssp CCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEE----------------SSSCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEE----------------EeCchHHHHHHHHH
Confidence 44544 55777889666 689998 6899999999 898643321110 11235555554433
Q ss_pred CCC----CeEEEeCCCCCHHHHhhcccCee
Q 043920 184 ETQ----PEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 184 ~~~----~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+.+ -.+++|||.+|+...+.+|-..+
T Consensus 132 ~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 132 KTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 222 25689999999999999987644
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.011 Score=60.81 Aligned_cols=87 Identities=18% Similarity=0.242 Sum_probs=51.8
Q ss_pred HHHHHHHhhCCCEE-EEecCc---------HHH---HHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCCCch---
Q 043920 111 PESWRVFSSCGKRC-VLTANP---------RIM---VEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVLVGN--- 172 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~---------~~~---v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l~g~--- 172 (504)
.++++.++++|+.+ |+|... +.+ ++.+++. +|+ |.+++++- +..+.
T Consensus 93 ~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~fd~i~~~~~---------------~~~~KP~p 156 (416)
T 3zvl_A 93 PKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVPFQVLVATHA---------------GLNRKPVS 156 (416)
T ss_dssp HHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSCCEEEEECSS---------------STTSTTSS
T ss_pred HHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCCEEEEEECCC---------------CCCCCCCH
Confidence 34566788999877 588854 333 8888888 884 55555431 10111
Q ss_pred hHHHHHHHHhC----C-CCCeEEEeCCC-----------------CCHHHHhhcccCeeeCCCc
Q 043920 173 KKADALLKAFG----E-TQPEIGLGDRQ-----------------TDIPFMALCKEGYLVPSKP 214 (504)
Q Consensus 173 ~Kv~~l~~~~~----~-~~~~~aygDS~-----------------~DlpmL~~a~~~~~Vnp~~ 214 (504)
+=...+.+.++ . ..-.+.+|||. +|+..-..+|-.++ .|..
T Consensus 157 ~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~-~pe~ 219 (416)
T 3zvl_A 157 GMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA-TPEE 219 (416)
T ss_dssp HHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE-CHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc-CcHH
Confidence 11223333333 1 11256899997 68888888888854 4443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.012 Score=56.98 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=42.4
Q ss_pred HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEEE-eCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeE
Q 043920 116 VFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIAT-YKGRATGLVRDPGVLVGNKKADALLKAFGETQPEI 189 (504)
Q Consensus 116 ~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~~-~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~ 189 (504)
.++++|+.+ ++||-+...+.++++. +|++. +++..-.. .+. +|++....+ ...+.++.+.+++.+.++.+
T Consensus 32 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~--~~~~~~~~~-~~~~~~~~i~~~l~~~~~~~ 104 (288)
T 1nrw_A 32 QAQRDGIEVVVSTGRAHFDVMSIFEP-LGIKTWVISANGAVIHDP--EGRLYHHET-IDKKRAYDILSWLESENYYY 104 (288)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHGG-GTCCCEEEEGGGTEEECT--TCCEEEECC-CCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCcEEEcCCeEEEcC--CCcEEEEee-CCHHHHHHHHHHHHHCCcEE
Confidence 345578776 4899998899999998 88864 55543211 110 344333333 34567777777766555544
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.00092 Score=61.22 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=25.3
Q ss_pred cCHHH---HHHHhhC-CCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 109 LHPES---WRVFSSC-GKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 109 ~~~~~---~~~~~~~-G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
.+|.+ ++.++++ |..+ |+|+++...++...+. +|+.
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~ 116 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWV 116 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHH
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchH
Confidence 45655 4477788 8776 6899988777777776 5653
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0038 Score=59.09 Aligned_cols=43 Identities=26% Similarity=0.168 Sum_probs=38.2
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhc--ccCeeeCCC
Q 043920 170 VGNKKADALLKAFGETQPEIGLGDRQTDIPFMALC--KEGYLVPSK 213 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a--~~~~~Vnp~ 213 (504)
.|..|...|+.+....+ .+|+|||.||++||+.| +.++++...
T Consensus 157 ~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na 201 (239)
T 1u02_A 157 PGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG 201 (239)
T ss_dssp TTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred CCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence 45679999999988777 78999999999999999 999999765
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.01 Score=53.86 Aligned_cols=35 Identities=6% Similarity=-0.061 Sum_probs=26.6
Q ss_pred cCHHHHH---HHhhC-CCEE-EEecCcHHHHHHHHHhhcCC
Q 043920 109 LHPESWR---VFSSC-GKRC-VLTANPRIMVEAFLKDFLAA 144 (504)
Q Consensus 109 ~~~~~~~---~~~~~-G~~v-vvSas~~~~v~~ia~~~Lg~ 144 (504)
++|++.+ .++++ |..+ |+|+++...++.+.+. +|+
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl 113 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW 113 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc
Confidence 5566554 67778 8776 6899998888888888 675
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.018 Score=51.26 Aligned_cols=90 Identities=11% Similarity=0.125 Sum_probs=54.8
Q ss_pred HHHHHHhhCCCEE-EEecCcH---------------HHHHHHHHhhcC--CcEEEeeeEEEeCCeeeeeEeCCCCCCchh
Q 043920 112 ESWRVFSSCGKRC-VLTANPR---------------IMVEAFLKDFLA--ADLVLGTEIATYKGRATGLVRDPGVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~---------------~~v~~ia~~~Lg--~d~vigt~l~~~~g~~tG~i~g~~~l~g~~ 173 (504)
++++.++++|+.+ |+|+++. ..++.+.+. +| ++.++.......+ .+-.+.-
T Consensus 34 ~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~----------~~~~~KP 102 (179)
T 3l8h_A 34 QAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MGGVVDAIFMCPHGPDD----------GCACRKP 102 (179)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TTCCCCEEEEECCCTTS----------CCSSSTT
T ss_pred HHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEEcCCCCCC----------CCCCCCC
Confidence 4556788899877 6899886 567788888 89 7776532211000 0101111
Q ss_pred HHHH---HHHHhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 174 KADA---LLKAFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 174 Kv~~---l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
+.+. +.+.++.. .-.+++|||.+|+.+.+.+|-. +.|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 146 (179)
T 3l8h_A 103 LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT 146 (179)
T ss_dssp SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC
Confidence 2223 33334432 2357899999999999999954 45654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.10 E-value=0.0066 Score=58.84 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=39.6
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++.+....++ .+++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~ 251 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN 251 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCC
Confidence 455788888776543332 57999999999999999999999 56667776555
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.0068 Score=58.29 Aligned_cols=52 Identities=13% Similarity=0.314 Sum_probs=39.9
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++..+...++ .+++|||.||++|++.|+.++++ |..+.+++.|.
T Consensus 188 ~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~ 244 (271)
T 1rlm_A 188 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR 244 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCC
Confidence 355688877776543332 56999999999999999999998 56777776665
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0076 Score=57.13 Aligned_cols=50 Identities=20% Similarity=0.222 Sum_probs=39.4
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAV 219 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~ 219 (504)
.|..|...++......++ .+++|||.||++|++.++.++++ |..+.+++.
T Consensus 159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 455788888777654443 56999999999999999999999 566778775
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.012 Score=56.98 Aligned_cols=52 Identities=15% Similarity=0.249 Sum_probs=39.3
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...++......++ .+++|||.||++|++.|+.++++. +.+.+++.|.
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~ 269 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD 269 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCc
Confidence 455787777776544433 569999999999999999999985 5666776554
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=94.48 E-value=0.017 Score=55.02 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=37.8
Q ss_pred HHHhhCCCEE-EEecCcHHHHHHHHHhhcC----CcEEEeeeEEEeCCee---eeeEeCCCCCCchhHHHHHHHHhCCCC
Q 043920 115 RVFSSCGKRC-VLTANPRIMVEAFLKDFLA----ADLVLGTEIATYKGRA---TGLVRDPGVLVGNKKADALLKAFGETQ 186 (504)
Q Consensus 115 ~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg----~d~vigt~l~~~~g~~---tG~i~g~~~l~g~~Kv~~l~~~~~~~~ 186 (504)
+.++++|+.+ ++||-+ ..++++.+. +| ++.+++. ||-+ .|++.-..+ ...+.++.+-+++.+.+
T Consensus 30 ~~l~~~G~~~~iaTGR~-~~~~~~~~~-l~~~~~~~~~i~~-----nGa~i~~~~~~i~~~~-l~~~~~~~i~~~~~~~~ 101 (261)
T 2rbk_A 30 EAAHAKGLKIFIATGRP-KAIINNLSE-LQDRNLIDGYITM-----NGAYCFVGEEVIYKSA-IPQEEVKAMAAFCEKKG 101 (261)
T ss_dssp HHHHHTTCEEEEECSSC-GGGCCSCHH-HHHTTCCCEEEEG-----GGTEEEETTEEEEECC-CCHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEEECCCh-HHHHHHHHH-hCcccccCeEEEe-----CCEEEEECCEEEEecC-CCHHHHHHHHHHHHHcC
Confidence 3455678776 489988 778888777 77 7755543 3322 244332223 33455666666554444
Q ss_pred Ce
Q 043920 187 PE 188 (504)
Q Consensus 187 ~~ 188 (504)
+.
T Consensus 102 ~~ 103 (261)
T 2rbk_A 102 VP 103 (261)
T ss_dssp CC
T ss_pred Ce
Confidence 43
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.44 E-value=0.037 Score=53.45 Aligned_cols=72 Identities=19% Similarity=0.143 Sum_probs=40.2
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEE-eCCeeeeeEeCCCCCCchhHHHHHHHHhCCCC
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIAT-YKGRATGLVRDPGVLVGNKKADALLKAFGETQ 186 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~-~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~ 186 (504)
+++.++++|+.+ ++||-+...+.++++. ++++ .++|..-.. .+ .-+|++.-..+ ...+-++.+.+++.+.+
T Consensus 30 aL~~l~~~Gi~vviaTGR~~~~~~~~~~~-l~l~~~~~~~I~~NGa~i~~-~~~~~~i~~~~-l~~~~~~~i~~~~~~~~ 106 (282)
T 1rkq_A 30 AIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCITYNGALVQK-AADGSTVAQTA-LSYDDYRFLEKLSREVG 106 (282)
T ss_dssp HHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCCSTTCEEEEGGGTEEEE-TTTCCEEEECC-BCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCCCCeEEEeCCeEEEE-CCCCeEEEEec-CCHHHHHHHHHHHHHcC
Confidence 344556689776 4899988888999998 8986 355533211 00 00233322223 34455566655554434
Q ss_pred C
Q 043920 187 P 187 (504)
Q Consensus 187 ~ 187 (504)
+
T Consensus 107 ~ 107 (282)
T 1rkq_A 107 S 107 (282)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.37 E-value=0.015 Score=57.03 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=39.7
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...++......++ .+++|||.||++|++.|+.++++. ..+.++..|.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~ 277 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAK 277 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSS
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCC
Confidence 455788888877654433 569999999999999999999985 5566776555
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=94.20 E-value=0.024 Score=52.39 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=55.8
Q ss_pred HHHHHHhhCCCEE-EEecCcH---------------HHHHHHHHhhcCC--cEEEeeeEEEeCCeeeeeEeCCCCCCchh
Q 043920 112 ESWRVFSSCGKRC-VLTANPR---------------IMVEAFLKDFLAA--DLVLGTEIATYKGRATGLVRDPGVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~---------------~~v~~ia~~~Lg~--d~vigt~l~~~~g~~tG~i~g~~~l~g~~ 173 (504)
++++.++++|..+ |+|++.. ..++.+.+. +|+ +.++.+.... +|.+. +.... +..+.-
T Consensus 63 e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~-~g~~~-~~~~~-~~~~KP 138 (218)
T 2o2x_A 63 PAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVFVDMVLACAYHE-AGVGP-LAIPD-HPMRKP 138 (218)
T ss_dssp HHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCCCSEEEEECCCT-TCCST-TCCSS-CTTSTT
T ss_pred HHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCceeeEEEeecCC-CCcee-ecccC-CccCCC
Confidence 4455677789666 6899988 688888888 885 4433222110 12111 11011 112222
Q ss_pred HHHHHHHH---hCCC-CCeEEEeCCCCCHHHHhhcccCe--eeCC
Q 043920 174 KADALLKA---FGET-QPEIGLGDRQTDIPFMALCKEGY--LVPS 212 (504)
Q Consensus 174 Kv~~l~~~---~~~~-~~~~aygDS~~DlpmL~~a~~~~--~Vnp 212 (504)
|...++.. ++.. .-.+++|||.+|+.+.+.+|-.. .|..
T Consensus 139 ~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~ 183 (218)
T 2o2x_A 139 NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDG 183 (218)
T ss_dssp SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETC
T ss_pred CHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEec
Confidence 33344433 3321 12578999999999999999874 5544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.05 E-value=0.091 Score=50.49 Aligned_cols=37 Identities=5% Similarity=0.002 Sum_probs=27.5
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE--EEee
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL--VLGT 150 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~--vigt 150 (504)
+++.++++|..+ ++||-+...++++.+. +|++. ++|.
T Consensus 34 ~l~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~I~~ 73 (275)
T 1xvi_A 34 WLTRLREANVPVILCSSKTSAEMLYLQKT-LGLQGLPLIAE 73 (275)
T ss_dssp HHHHHHHTTCCEEEECSSCHHHHHHHHHH-TTCTTSCEEEG
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCeEEEe
Confidence 444556688665 5899998999999999 89863 5554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.018 Score=48.35 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=52.8
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC-C
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET-Q 186 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~ 186 (504)
+++.++++|..+ |+|+++...++.+.+. +|+ |.+++++-. + ... + . .+-.+.+.+.++.. .
T Consensus 26 ~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~---~-----~~K--p-~-~~~~~~~~~~~~~~~~ 92 (137)
T 2pr7_A 26 LLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGEL---G-----VEK--P-E-EAAFQAAADAIDLPMR 92 (137)
T ss_dssp HHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHH---S-----CCT--T-S-HHHHHHHHHHTTCCGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccC---C-----CCC--C-C-HHHHHHHHHHcCCCcc
Confidence 344567789776 5899998888888887 764 444443210 0 000 1 1 11122222333422 1
Q ss_pred CeEEEeCCCCCHHHHhhccc-CeeeCCCcc
Q 043920 187 PEIGLGDRQTDIPFMALCKE-GYLVPSKPE 215 (504)
Q Consensus 187 ~~~aygDS~~DlpmL~~a~~-~~~Vnp~~~ 215 (504)
-.+.+|||.+|+.+.+.+|- .+.++....
T Consensus 93 ~~~~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 93 DCVLVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp GEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 25689999999999999884 455665443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.48 E-value=0.021 Score=55.03 Aligned_cols=44 Identities=20% Similarity=0.293 Sum_probs=32.9
Q ss_pred CchhHHHHHHHHhCCC-----CC--eEEEeCCCCCHHHHhhcccCeee-CCC
Q 043920 170 VGNKKADALLKAFGET-----QP--EIGLGDRQTDIPFMALCKEGYLV-PSK 213 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~-----~~--~~aygDS~~DlpmL~~a~~~~~V-np~ 213 (504)
.|..|...++...... .- .+++|||.||++||+.|+.++++ |+.
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~ 237 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLN 237 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCC
Confidence 3456777776654322 23 56999999999999999999999 455
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.39 E-value=0.13 Score=48.61 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=14.1
Q ss_pred ceEEEEecCCccccCC
Q 043920 20 KHTVVADMDGTLLRGR 35 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~d 35 (504)
.++++||+||||++++
T Consensus 8 ~kli~~DlDGTLl~~~ 23 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV 23 (268)
T ss_dssp CSEEEEECBTTTEETT
T ss_pred CCEEEEcCcCcEECCC
Confidence 5899999999999854
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=93.37 E-value=0.026 Score=53.72 Aligned_cols=52 Identities=21% Similarity=0.305 Sum_probs=38.1
Q ss_pred CchhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...++......+ -.+++|||.||++|++.|+.++++. +.+.++..|.
T Consensus 184 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~ 240 (261)
T 2rbk_A 184 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD 240 (261)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCC
Confidence 45568877776654333 2579999999999999999999884 4566665554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.16 E-value=0.019 Score=55.10 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=38.4
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++......++ .+++|||.||++|++.|+.++++ |..+.++..|.
T Consensus 187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~ 243 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD 243 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCS
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCC
Confidence 345687777766543222 57999999999999999999998 45666766554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.049 Score=51.69 Aligned_cols=42 Identities=24% Similarity=0.346 Sum_probs=33.2
Q ss_pred hHHHHHHHHhCCCC------CeEEEeCCCCCHHHHhhcccCeeeC-CCc
Q 043920 173 KKADALLKAFGETQ------PEIGLGDRQTDIPFMALCKEGYLVP-SKP 214 (504)
Q Consensus 173 ~Kv~~l~~~~~~~~------~~~aygDS~~DlpmL~~a~~~~~Vn-p~~ 214 (504)
.|...++..+...+ -.+++|||.||++|++.|+.++++. ..+
T Consensus 176 ~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 176 DKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 58887777654433 2579999999999999999999995 444
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=92.49 E-value=0.068 Score=47.76 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=55.9
Q ss_pred HHHHHHhhCCCEE-EEecC---------------cHHHHHHHHHhhcCCc--EEEeeeEEEeCCeeeeeEeCCCCCCchh
Q 043920 112 ESWRVFSSCGKRC-VLTAN---------------PRIMVEAFLKDFLAAD--LVLGTEIATYKGRATGLVRDPGVLVGNK 173 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas---------------~~~~v~~ia~~~Lg~d--~vigt~l~~~~g~~tG~i~g~~~l~g~~ 173 (504)
++++.++++|..+ |+|.+ +...++.+.+. +|++ .++.+. ......+-...-
T Consensus 49 e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~fd~v~~s~----------~~~~~~~~~~KP 117 (176)
T 2fpr_A 49 PQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQFDEVLICP----------HLPADECDCRKP 117 (176)
T ss_dssp HHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCCEEEEEEEC----------CCGGGCCSSSTT
T ss_pred HHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCCeeEEEEcC----------CCCcccccccCC
Confidence 3455777889776 68988 78889999998 8874 333220 000000001111
Q ss_pred HHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccC-eeeCCCc-chhcccc
Q 043920 174 KADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEG-YLVPSKP-EVKAVTC 221 (504)
Q Consensus 174 Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~-~~Vnp~~-~l~~~A~ 221 (504)
|.+.++..+.+.+ -.+++||+.+|+...+.+|-. +.|++.. .|..++.
T Consensus 118 ~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~ 171 (176)
T 2fpr_A 118 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE 171 (176)
T ss_dssp SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTBCHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcccHHHHHH
Confidence 2223333222222 256899999999999999976 4566543 3555443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=92.15 E-value=0.02 Score=54.11 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=35.6
Q ss_pred CchhHHHHHHHHhCCC-CCeEEEeC----CCCCHHHHhhccc-CeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGET-QPEIGLGD----RQTDIPFMALCKE-GYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~-~~~~aygD----S~~DlpmL~~a~~-~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.+++-. .-.+|+|| |.||++||+.++. .++|. ..++++++|.
T Consensus 185 ~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~ 243 (246)
T 2amy_A 185 DGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL 243 (246)
T ss_dssp TTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHH
T ss_pred CCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHh
Confidence 4556877877773321 12469999 9999999998877 77775 5677887765
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=91.63 E-value=0.49 Score=42.29 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=52.1
Q ss_pred HHHHHHhhCCCEE-EEecCcH---HHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhC
Q 043920 112 ESWRVFSSCGKRC-VLTANPR---IMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFG 183 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~---~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~ 183 (504)
++++.++++|..+ |+|+++. ..++.+.+. +|++ .+++++-.+..+ | ...+ . .+-.+.+.+.++
T Consensus 41 ~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~---~-~~KP---~-p~~~~~~~~~~~ 111 (189)
T 3ib6_A 41 ETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPG---K-MEKP---D-KTIFDFTLNALQ 111 (189)
T ss_dssp HHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTT---C-CCTT---S-HHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEcccccccc---C-CCCc---C-HHHHHHHHHHcC
Confidence 3455788899776 6898776 889999998 8974 333332100000 0 0000 0 011122223334
Q ss_pred CC-CCeEEEeCC-CCCHHHHhhcccCeee
Q 043920 184 ET-QPEIGLGDR-QTDIPFMALCKEGYLV 210 (504)
Q Consensus 184 ~~-~~~~aygDS-~~DlpmL~~a~~~~~V 210 (504)
.. .-.+.+||| .+|+..-+.+|-..+.
T Consensus 112 ~~~~~~l~VGD~~~~Di~~A~~aG~~~i~ 140 (189)
T 3ib6_A 112 IDKTEAVMVGNTFESDIIGANRAGIHAIW 140 (189)
T ss_dssp CCGGGEEEEESBTTTTHHHHHHTTCEEEE
T ss_pred CCcccEEEECCCcHHHHHHHHHCCCeEEE
Confidence 32 225689999 7999999999876543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=90.39 E-value=0.1 Score=43.95 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=14.3
Q ss_pred ceEEEEecCCccccCCC
Q 043920 20 KHTVVADMDGTLLRGRS 36 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ds 36 (504)
.++++||+||||++.+.
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 36899999999998754
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=90.10 E-value=0.1 Score=45.21 Aligned_cols=17 Identities=35% Similarity=0.655 Sum_probs=14.6
Q ss_pred cceEEEEecCCccccCC
Q 043920 19 EKHTVVADMDGTLLRGR 35 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~d 35 (504)
.+++++||+||||+..+
T Consensus 2 ~~k~i~~DlDGTL~~~~ 18 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHR 18 (142)
T ss_dssp CCCEEEECCBTTTBCSC
T ss_pred CCeEEEEECcCCCCCCC
Confidence 47899999999999853
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=89.80 E-value=0.04 Score=52.33 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=34.1
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeCC----CCCHHHHh---hcccCeeeCCCcchhccc
Q 043920 170 VGNKKADALLKAFGETQPEIGLGDR----QTDIPFMA---LCKEGYLVPSKPEVKAVT 220 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygDS----~~DlpmL~---~a~~~~~Vnp~~~l~~~A 220 (504)
.|..|...|+.+.....-.+|+||+ .||++||+ .+++++. ||+..++.++
T Consensus 184 ~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~ 240 (246)
T 3f9r_A 184 VGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVE 240 (246)
T ss_dssp TTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHH
Confidence 4667888888877622235699996 99999999 4555543 5655555443
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=89.44 E-value=0.12 Score=49.34 Aligned_cols=52 Identities=17% Similarity=0.090 Sum_probs=36.8
Q ss_pred CchhHHHHHHHHhCCC-CCeEEEeC----CCCCHHHHhhccc-Ceee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGET-QPEIGLGD----RQTDIPFMALCKE-GYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~-~~~~aygD----S~~DlpmL~~a~~-~~~V-np~~~l~~~A~ 221 (504)
.|..|...|+.+++.. .-.+|+|| |.||++||+.++. .++| |..+.+++.|.
T Consensus 194 ~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~ 252 (262)
T 2fue_A 194 EGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCRE 252 (262)
T ss_dssp TTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhh
Confidence 4557888888873321 12469999 9999999998663 5555 45667777665
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=89.12 E-value=0.15 Score=47.83 Aligned_cols=19 Identities=32% Similarity=0.368 Sum_probs=15.6
Q ss_pred CCcceEEEEecCCccccCC
Q 043920 17 GREKHTVVADMDGTLLRGR 35 (504)
Q Consensus 17 ~~~~~~a~FD~DgTL~~~d 35 (504)
.+..++++||+||||++.+
T Consensus 3 ~~~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPR 21 (246)
T ss_dssp -CCSEEEEEESBTTTBCTT
T ss_pred CCCceEEEEECCCCcCCCC
Confidence 4567999999999999864
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=88.15 E-value=0.14 Score=45.41 Aligned_cols=22 Identities=5% Similarity=0.147 Sum_probs=16.5
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeC
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
++++|||.+|+. ..+|..++++
T Consensus 131 ~l~ieDs~~~i~--~aaG~~i~~~ 152 (180)
T 3bwv_A 131 DYLIDDNPKQLE--IFEGKSIMFT 152 (180)
T ss_dssp SEEEESCHHHHH--HCSSEEEEEC
T ss_pred cEEecCCcchHH--HhCCCeEEeC
Confidence 688999999975 5677555555
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=87.46 E-value=0.19 Score=47.39 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=37.1
Q ss_pred HHhhCCCEEE-EecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCee---eeeEeCCCCCCchhHHHHHHHHhCCCCCeE
Q 043920 116 VFSSCGKRCV-LTANPRIMVEAFLKDFLAADLVLGTEIATYKGRA---TGLVRDPGVLVGNKKADALLKAFGETQPEI 189 (504)
Q Consensus 116 ~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~---tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~ 189 (504)
.++++|+.++ +||-+...+.++.+. +|++.+++. ||.+ .|++..... ...+.++.+-+++.+.++.+
T Consensus 31 ~l~~~G~~~~~aTGR~~~~~~~~~~~-l~~~~~i~~-----nGa~i~~~~~~i~~~~-~~~~~~~~i~~~~~~~~~~~ 101 (258)
T 2pq0_A 31 RLKQSGVYVAIATGRAPFMFEHVRKQ-LGIDSFVSF-----NGQYVVFEGNVLYKQP-LRREKVRALTEEAHKNGHPL 101 (258)
T ss_dssp HHHHTTCEEEEECSSCGGGSHHHHHH-HTCCCEEEG-----GGTEEEETTEEEEECC-CCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHh-cCCCEEEEC-----CCCEEEECCEEEEEec-CCHHHHHHHHHHHHhCCCeE
Confidence 3445787664 788777777888888 888754432 2211 223222222 33456666666655444433
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=87.14 E-value=0.23 Score=46.93 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=16.0
Q ss_pred CcceEEEEecCCccccCCC
Q 043920 18 REKHTVVADMDGTLLRGRS 36 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds 36 (504)
|..++++||+||||++.+.
T Consensus 2 M~~kli~~DlDGTLl~~~~ 20 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRL 20 (246)
T ss_dssp CCSEEEEECSBTTTBSTTS
T ss_pred CCceEEEEeCcCCcCCCCC
Confidence 5578999999999998643
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=85.61 E-value=0.29 Score=46.63 Aligned_cols=63 Identities=13% Similarity=0.106 Sum_probs=33.3
Q ss_pred HHhhCCCEE-EEecCcHHHHHHHHHhhcCC-cEEEeeeEE--EeCCeeeeeEeCCCCCCchhHHHHHHHHhCC
Q 043920 116 VFSSCGKRC-VLTANPRIMVEAFLKDFLAA-DLVLGTEIA--TYKGRATGLVRDPGVLVGNKKADALLKAFGE 184 (504)
Q Consensus 116 ~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-d~vigt~l~--~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~ 184 (504)
.++++|+.+ ++||=+..-++++.+. ++. +.++|..-. ..+ |++.-... ...+.++.+.+.+.+
T Consensus 32 ~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~----~~~i~~~~-l~~~~~~~i~~~~~~ 98 (271)
T 1rlm_A 32 ELKKRGIKFVVASGNQYYQLISFFPE-LKDEISFVAENGALVYEH----GKQLFHGE-LTRHESRIVIGELLK 98 (271)
T ss_dssp HHHHHTCEEEEECSSCHHHHGGGCTT-TTTTSEEEEGGGTEEEET----TEEEEECC-CCHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEEEeCCcHHHHHHHHHh-cCCCCEEEECCccEEEEC----CeEEEEec-CCHHHHHHHHHHHHh
Confidence 344568666 4788887777777776 664 344432211 112 33222123 445666666666544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=83.78 E-value=0.34 Score=45.69 Aligned_cols=14 Identities=43% Similarity=0.686 Sum_probs=13.1
Q ss_pred ceEEEEecCCcccc
Q 043920 20 KHTVVADMDGTLLR 33 (504)
Q Consensus 20 ~~~a~FD~DgTL~~ 33 (504)
.++++||+||||++
T Consensus 12 iKli~~DlDGTLl~ 25 (268)
T 3r4c_A 12 IKVLLLDVDGTLLS 25 (268)
T ss_dssp CCEEEECSBTTTBC
T ss_pred eEEEEEeCCCCCcC
Confidence 58999999999998
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=83.77 E-value=0.36 Score=45.65 Aligned_cols=24 Identities=29% Similarity=0.199 Sum_probs=19.7
Q ss_pred eEEEeCC-CCCHHHHhhcccC-eeeC
Q 043920 188 EIGLGDR-QTDIPFMALCKEG-YLVP 211 (504)
Q Consensus 188 ~~aygDS-~~DlpmL~~a~~~-~~Vn 211 (504)
.+++||| .+|+.|.+.+|-. ++|+
T Consensus 202 ~~~vGD~~~~Di~~a~~aG~~~~~v~ 227 (264)
T 3epr_A 202 AVMVGDNYLTDIMAGINNDIDTLLVT 227 (264)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEC
Confidence 5799999 7999999999964 4554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=83.31 E-value=0.4 Score=45.25 Aligned_cols=14 Identities=57% Similarity=0.866 Sum_probs=12.4
Q ss_pred EEEEecCCccccCC
Q 043920 22 TVVADMDGTLLRGR 35 (504)
Q Consensus 22 ~a~FD~DgTL~~~d 35 (504)
+++||+||||++.+
T Consensus 2 li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 2 IVFTDLDGTLLDER 15 (259)
T ss_dssp EEEECCCCCCSCSS
T ss_pred EEEEeCCCCCcCCC
Confidence 68999999999864
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=83.20 E-value=0.38 Score=42.33 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=13.9
Q ss_pred ceEEEEecCCccccCC
Q 043920 20 KHTVVADMDGTLLRGR 35 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~d 35 (504)
+++++||+||||++..
T Consensus 1 ~k~v~~D~DGtL~~~~ 16 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDS 16 (179)
T ss_dssp CCEEEECSBTTTBCCC
T ss_pred CCEEEEcCCCccccCC
Confidence 4789999999999864
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=82.42 E-value=0.5 Score=44.80 Aligned_cols=17 Identities=41% Similarity=0.581 Sum_probs=14.3
Q ss_pred cceEEEEecCCccccCC
Q 043920 19 EKHTVVADMDGTLLRGR 35 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~d 35 (504)
..++++||+||||++.+
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 46899999999999864
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=82.18 E-value=0.43 Score=42.55 Aligned_cols=15 Identities=33% Similarity=0.175 Sum_probs=13.0
Q ss_pred ceEEEEecCCccccC
Q 043920 20 KHTVVADMDGTLLRG 34 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ 34 (504)
.++++||+||||++.
T Consensus 27 ~k~vifDlDGTL~~~ 41 (187)
T 2wm8_A 27 PKLAVFDLDYTLWPF 41 (187)
T ss_dssp CSEEEECSBTTTBSS
T ss_pred cCEEEEcCCCCcchH
Confidence 479999999999854
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=82.06 E-value=1.3 Score=39.94 Aligned_cols=87 Identities=9% Similarity=0.030 Sum_probs=51.0
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC--CCe
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET--QPE 188 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~--~~~ 188 (504)
++++.++++|..+ |+|++++..+..+.+ ..+|.+++++-. + ...+ .. +=.....+.++.. .-.
T Consensus 43 e~L~~L~~~g~~~~i~T~~~~~~~~~~~~--~~~d~v~~~~~~-------~-~~KP---~p-~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 43 NALKALRDQGMPCAWIDELPEALSTPLAA--PVNDWMIAAPRP-------T-AGWP---QP-DACWMALMALNVSQLEGC 108 (196)
T ss_dssp HHHHHHHHHTCCEEEECCSCHHHHHHHHT--TTTTTCEECCCC-------S-SCTT---ST-HHHHHHHHHTTCSCSTTC
T ss_pred HHHHHHHHCCCEEEEEcCChHHHHHHhcC--ccCCEEEECCcC-------C-CCCC---Ch-HHHHHHHHHcCCCCCccE
Confidence 3455778889766 689999888865554 235666664410 0 0011 11 1111222234432 235
Q ss_pred EEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 189 IGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 189 ~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
+.+|||.+|+..-+.+|-. +.|+.
T Consensus 109 v~VGDs~~Di~aA~~aG~~~i~v~~ 133 (196)
T 2oda_A 109 VLISGDPRLLQSGLNAGLWTIGLAS 133 (196)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEESS
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEcc
Confidence 7899999999999999864 45654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=82.01 E-value=0.61 Score=41.34 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=15.7
Q ss_pred cceEEEEecCCccccCCC
Q 043920 19 EKHTVVADMDGTLLRGRS 36 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds 36 (504)
..++++||+||||+++..
T Consensus 8 ~ikliv~D~DGtL~d~~~ 25 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHI 25 (168)
T ss_dssp CCCEEEEECCCCCSCSCC
T ss_pred cCcEEEEeCccceECCcE
Confidence 467999999999999864
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.92 E-value=0.47 Score=44.24 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=28.3
Q ss_pred chhHHHHHHHHhCCCCC----eEEEeCCC-CCHHHHhhcccCeee
Q 043920 171 GNKKADALLKAFGETQP----EIGLGDRQ-TDIPFMALCKEGYLV 210 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~aygDS~-~DlpmL~~a~~~~~V 210 (504)
+..|...++..+...++ .+++|||. +|++|++.+|..++.
T Consensus 189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~ 233 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQ 233 (271)
T ss_dssp STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEE
Confidence 34566666654433222 56999998 999999999988653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=80.70 E-value=0.64 Score=44.69 Aligned_cols=19 Identities=32% Similarity=0.538 Sum_probs=16.2
Q ss_pred ceEEEEecCCccccCCCcH
Q 043920 20 KHTVVADMDGTLLRGRSSF 38 (504)
Q Consensus 20 ~~~a~FD~DgTL~~~ds~~ 38 (504)
.+.++||+||||+++...+
T Consensus 32 i~~viFD~dGTL~ds~~~~ 50 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKPEV 50 (287)
T ss_dssp CCEEEEECCCCCBCSCCEE
T ss_pred CCEEEEeCCCCCcCCCEEE
Confidence 5789999999999987643
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=80.33 E-value=0.48 Score=42.94 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=13.1
Q ss_pred cceEEEEecCCcccc
Q 043920 19 EKHTVVADMDGTLLR 33 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~ 33 (504)
..++++||+||||++
T Consensus 5 ~~kav~fDlDGTL~d 19 (196)
T 2oda_A 5 TFPALLFGLSGCLVD 19 (196)
T ss_dssp CCSCEEEETBTTTBC
T ss_pred cCCEEEEcCCCceEe
Confidence 357899999999987
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=80.15 E-value=0.54 Score=44.20 Aligned_cols=25 Identities=36% Similarity=0.271 Sum_probs=20.5
Q ss_pred eEEEeCC-CCCHHHHhhcccC-eeeCC
Q 043920 188 EIGLGDR-QTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 188 ~~aygDS-~~DlpmL~~a~~~-~~Vnp 212 (504)
.+++||| .+|+.+.+.+|-. +.|+.
T Consensus 203 ~~~vGD~~~~Di~~a~~aG~~~i~v~~ 229 (264)
T 1yv9_A 203 VIMVGDNYETDIQSGIQNGIDSLLVTS 229 (264)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred EEEECCCcHHHHHHHHHcCCcEEEECC
Confidence 5689999 6999999999976 45654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 504 | |||
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.85 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.73 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.67 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.58 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.37 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.14 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.74 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.38 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.24 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.14 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.12 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.1 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.93 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.93 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.88 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.83 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 97.78 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.69 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 97.67 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.66 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.57 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.56 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 97.5 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.41 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 97.37 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.35 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.31 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.16 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 97.11 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 97.05 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 96.99 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.92 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.85 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.71 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.7 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.69 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 96.62 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.58 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 96.32 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 96.3 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 96.12 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.66 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.27 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 94.22 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 94.06 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 91.78 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 91.52 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 91.09 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 90.79 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 89.49 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 89.04 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 86.63 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.6 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 86.06 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 85.23 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 84.44 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 84.13 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 83.37 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 83.03 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 82.1 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 81.92 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 81.78 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 80.72 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 80.25 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 80.09 |
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=3.4e-22 Score=188.14 Aligned_cols=193 Identities=15% Similarity=0.076 Sum_probs=133.6
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH--HHHHHHHHHhcCCCHHHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA--GIQVLIFASFVGLRVTDIESV 96 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~l~~~ 96 (504)
.++.++|||||||+++++. ..+.... ......+.+ .. .+..+..+. .+++ ....++|...+.++.+
T Consensus 9 ~~~aV~FD~DGTLi~~e~~-~~l~~~~-g~~~~~~~~--------~~-~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 76 (217)
T d1nnla_ 9 SADAVCFDVDSTVIREEGI-DELAKIC-GVEDAVSEM--------TR-RAMGGAVPFKAALTE-RLALIQPSREQVQRLI 76 (217)
T ss_dssp HCSEEEEETBTTTBSSCHH-HHHHHHT-TCTTTC---------------------CHHHHHHH-HHHHHCCCHHHHHHHH
T ss_pred CCCEEEEcCccccCCccHH-HHHHHHc-CChHHHHHH--------HH-HHHcCCCCHHHHHHH-HHHhcccchHHHHHHH
Confidence 5678899999999999873 3332111 000001100 00 000011111 1222 2346778766655544
Q ss_pred HHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc--EEEeeeEEEe-CCeeeeeEeCCCCC
Q 043920 97 ARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD--LVLGTEIATY-KGRATGLVRDPGVL 169 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d--~vigt~l~~~-~g~~tG~i~g~~~l 169 (504)
.+.- ..++|.+ +++|+++|+++ ||||+++.+++++++. ||+| +++|+++.++ +|.+||...+.++.
T Consensus 77 ~~~~------~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~ 149 (217)
T d1nnla_ 77 AEQP------PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTA 149 (217)
T ss_dssp HHSC------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGG
T ss_pred Hhhc------cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeee
Confidence 3321 2255655 55889999877 5899999999999999 9996 6999999987 89999988877666
Q ss_pred CchhHHHHHHHHhCCCCC--eEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-ee
Q 043920 170 VGNKKADALLKAFGETQP--EIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FH 231 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~--~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~ 231 (504)
.+.+|++.++++..+.++ .++||||.+|++|++.|+.++++|+++.++.+++ +..|.|. |.
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~-~ad~~i~~f~ 213 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKD-NAKWYITDFV 213 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHH-HCSEEESCGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHH-hCCCEeCCHH
Confidence 788999999887543332 5799999999999999999999999999888888 8889875 43
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.73 E-value=2.2e-18 Score=171.33 Aligned_cols=166 Identities=14% Similarity=0.110 Sum_probs=112.8
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCChHHHHHHhhC-------CCccEEEec----ccchhhhhccCceeEeecCCh----
Q 043920 289 TPPPAAKKSTGQTGVLFVCSHRTLLDPIFLSVALG-------RPIPTVTYS----VSRLSEIISPIKAVRLSRDRA---- 353 (504)
Q Consensus 289 ~~~~~~~~~~~~~~~viVaNH~S~lD~~~l~~~~~-------~~~~~v~k~----~~~~~~~~~~~g~i~i~R~~~---- 353 (504)
.|+++ +.+++|++|||+|++|+++|..++. +++.|++|+ .|.+++++...|.|+|+|.+.
T Consensus 123 ~Ekl~-----~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~ 197 (367)
T d1iuqa_ 123 EEKLQ-----QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDI 197 (367)
T ss_dssp HHHHH-----TTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSS
T ss_pred HHHhc-----CCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEecccccccc
Confidence 45666 6789999999999999999877754 457899986 678899999999999987542
Q ss_pred ------------hhHHHHHHHhhcC-C-EEEEcCceeeC----CCcc--ccccccc--------cccCCe--EEEEEEEc
Q 043920 354 ------------TDASTIKKLLEEG-D-LAMCPEGTTCR----EPFL--LRFSALF--------AELTDE--LVPVAMVN 403 (504)
Q Consensus 354 ------------~~~~~~~~~l~~G-~-l~IFPEGTrs~----~~~l--~~Fk~G~--------~~~~~p--IvPV~i~~ 403 (504)
..++.+.+.|++| . ++|||||||++ ++.+ .+|+++. .++++| |+||+|.+
T Consensus 198 p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~ 277 (367)
T d1iuqa_ 198 PELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLC 277 (367)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEEC
T ss_pred ccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhc
Confidence 1256677788887 4 67999999994 3333 3677762 357899 99999999
Q ss_pred cccCccccccCCCCCCcccc--ccccCCCeEEEEEecCcCCccccCCCCCHHHHHHHHHHHHHH
Q 043920 404 RMSMFHGTTARGWKGMDPFY--FFMNPCPAYEVTFLNKLPMELTCGSGKSSHEVANYIQRVIAA 465 (504)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~--~~~~p~~~v~V~~l~pi~~~~~~~~~~~~~~la~~v~~~i~~ 465 (504)
+..+...... ...+. ..++.+. |.|.|++||+..++....++..+..+...+.|-+
T Consensus 278 ~d~~pP~~~v-----~~~ige~R~~~~~~-V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~d 335 (367)
T d1iuqa_ 278 HDIMPPPSQV-----EIEIGEKRVIAFNG-AGLSVAPEISFEEIAATHKNPEEVREAYSKALFD 335 (367)
T ss_dssp GGGSCCC---------------CCCCCBC-CEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHH
T ss_pred ccccCCCccc-----ccchhhccccCCCc-eeEEeCCCcchhhhhhhccchHHHHHHHHHHHHH
Confidence 7665433211 00000 1233344 8999999998875532344554444444444433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.67 E-value=3.9e-16 Score=143.02 Aligned_cols=189 Identities=18% Similarity=0.178 Sum_probs=125.2
Q ss_pred CCcceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccHHHHHHHHHHhcCCCHHHHHHH
Q 043920 17 GREKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESAGIQVLIFASFVGLRVTDIESV 96 (504)
Q Consensus 17 ~~~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~ 96 (504)
++.+++++||+||||++++|...+.. +.+ ...... ....... . ....... ........+.+......+..
T Consensus 1 ~~kkKlv~FDlDGTL~d~es~~~l~~----~~g-~~~~~~--~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 70 (210)
T d1j97a_ 1 EKKKKLILFDFDSTLVNNETIDEIAR----EAG-VEEEVK--KITKEAM-E-GKLNFEQ-SLRKRVSLLKDLPIEKVEKA 70 (210)
T ss_dssp CCCCCEEEECCCCCCBSSCHHHHHHH----HTT-CHHHHH--HHHHHHH-T-TSSCHHH-HHHHHHHTTTTCBHHHHHHH
T ss_pred CCCCeEEEEeCCCCcCCchHHHHHHH----HcC-CcHHHH--HHHHHHh-c-ccchhHH-HHHHHHHHHhhhHHHHHHHH
Confidence 35689999999999999987443322 111 111110 0000000 0 0111111 22233345667766666544
Q ss_pred HHHHcchhhhcccCHHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHH
Q 043920 97 ARAVLPKFYASDLHPESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKA 175 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv 175 (504)
...... ..-..+.++.++.+|..+ ++|++...+++...+. .+.+..+...+..+++..++....... .+..|.
T Consensus 71 ~~~~~~----~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 144 (210)
T d1j97a_ 71 IKRITP----TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVL-KENAKG 144 (210)
T ss_dssp HHTCCB----CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSC-STTHHH
T ss_pred hhhhhh----hhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhcccccccccccccccc-cccccc
Confidence 332211 111235566888899776 5899999999999999 899999999998899999988887644 777777
Q ss_pred HHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 176 DALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 176 ~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
..+.......+ -.+++|||.||+||++.||.++++|+++.+++.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~Ad 194 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKAD 194 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTCS
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhCC
Confidence 76666543322 25799999999999999999999999999988776
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.58 E-value=3.1e-15 Score=139.71 Aligned_cols=190 Identities=14% Similarity=0.065 Sum_probs=118.6
Q ss_pred cceEEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhccccccH--HHHHHHHHHhcCCCHHHHHHH
Q 043920 19 EKHTVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYLVSESA--GIQVLIFASFVGLRVTDIESV 96 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~l~~~ 96 (504)
.+.+++|||||||+++|+...++..+.. ...... ...+.....+. .+. .....+.+...+++...
T Consensus 3 ~k~lVifD~DGTL~~~d~~~~~~~~~~~---~~~~~i---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 69 (226)
T d2feaa1 3 RKPFIICDFDGTITMNDNIINIMKTFAP---PEWMAL---------KDGVLSKTLSIKEGVG-RMFGLLPSSLKEEITSF 69 (226)
T ss_dssp CCEEEEECCTTTTBSSCHHHHHHHHHSC---THHHHH---------HHHHHTTSSCHHHHHH-HHHTTSBGGGHHHHHHH
T ss_pred CCeEEEEeCCCCCcCchHHHHHHHHHCc---chHHHH---------HHHHHcCcccHHHHHH-HHHHHhccccHHHHHHH
Confidence 4678999999999999986665543211 111111 00111111121 122 22223444445555444
Q ss_pred HHHHcchhhhcccCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCC-cEEEeeeEEEeCCeeeeeEe--CCC--
Q 043920 97 ARAVLPKFYASDLHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAA-DLVLGTEIATYKGRATGLVR--DPG-- 167 (504)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~-d~vigt~l~~~~g~~tG~i~--g~~-- 167 (504)
..+..+ ++|.+. ++++++|..+ ++|++.+..+++++++ +|+ +.++|+++.++++..++... .+.
T Consensus 70 ~~~~~~------l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~ 142 (226)
T d2feaa1 70 VLEDAK------IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTC 142 (226)
T ss_dssp HHHHCC------BCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTC
T ss_pred HHhccc------hhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceecccccccccc
Confidence 433332 566554 4778889665 6899999999999999 876 78999999987665544321 111
Q ss_pred -CCCchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhccccccCCCcee-eeC
Q 043920 168 -VLVGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTCDKLPKPII-FHD 232 (504)
Q Consensus 168 -~l~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~~~~~W~i~-f~~ 232 (504)
...+..|...++++--...-.+++|||.+|++|++.|+.++++++ +...++ +.+.+.. |+|
T Consensus 143 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~---~~~~~~-~~~~~~~~~~d 205 (226)
T d2feaa1 143 SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY---LLNECR-EQNLNHLPYQD 205 (226)
T ss_dssp CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHH---HHHHHH-HTTCCEECCSS
T ss_pred ccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecc---hHHHHH-HcCCCeeecCC
Confidence 114566777777753222335699999999999999999998866 555666 7788876 653
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.37 E-value=2.7e-12 Score=116.54 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=72.8
Q ss_pred hCCCE-EEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCC-CCCeEEEeCCCC
Q 043920 119 SCGKR-CVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGE-TQPEIGLGDRQT 196 (504)
Q Consensus 119 ~~G~~-vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~-~~~~~aygDS~~ 196 (504)
.++.. +++|+++...++++... +++++..+..++..++...+..... .+..+...++. ++. ..-.+|+|||.|
T Consensus 82 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~-~~i~~~eviaiGDg~N 156 (206)
T d1rkua_ 82 RERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLR---QKDPKRQSVIA-FKSLYYRVIAAGDSYN 156 (206)
T ss_dssp HTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECC---SSSHHHHHHHH-HHHTTCEEEEEECSST
T ss_pred hcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeeccccccccccc---chhhHHHHHHH-hcccccceEEecCCcc
Confidence 45655 45899999999999999 9999999999988776666655543 23333333333 332 233579999999
Q ss_pred CHHHHhhcccCeeeCCCcchhcccc
Q 043920 197 DIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 197 DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
|+|||+.||.+++.||..++++-+.
T Consensus 157 Di~Ml~~Ag~gIAmna~~~v~~~~~ 181 (206)
T d1rkua_ 157 DTTMLSEAHAGILFHAPENVIREFP 181 (206)
T ss_dssp THHHHHHSSEEEEESCCHHHHHHCT
T ss_pred CHHHHHhCCccEEECCCHHHHHhCC
Confidence 9999999999999999888775443
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.14 E-value=1.7e-10 Score=111.48 Aligned_cols=142 Identities=11% Similarity=0.088 Sum_probs=94.9
Q ss_pred hcCCCHHHHHHHHHHHcchhhhcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeC
Q 043920 85 FVGLRVTDIESVARAVLPKFYASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYK 156 (504)
Q Consensus 85 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~ 156 (504)
-.|++.+++.+++.+.-- .+++.+ +++++++|..+ |+||+.+.+++++++. +|++ +++|+++++++
T Consensus 117 ~~~l~~~~i~~~v~~~~i-----~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~ 190 (291)
T d2bdua1 117 EQGIPKAKLKEIVADSDV-----MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDE 190 (291)
T ss_dssp HHCCBGGGHHHHHHHSCC-----CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECT
T ss_pred HcCCCHHHHHHHHHhcCC-----CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeC
Confidence 448888998887765311 155544 55788899665 6999999999999999 9986 59999999998
Q ss_pred CeeeeeEeCCCCCCchhHHHHH---HHHhC---CCCCeEEEeCCCCCHHHHhhcccC---ee---eCCCcchhccccccC
Q 043920 157 GRATGLVRDPGVLVGNKKADAL---LKAFG---ETQPEIGLGDRQTDIPFMALCKEG---YL---VPSKPEVKAVTCDKL 224 (504)
Q Consensus 157 g~~tG~i~g~~~l~g~~Kv~~l---~~~~~---~~~~~~aygDS~~DlpmL~~a~~~---~~---Vnp~~~l~~~A~~~~ 224 (504)
+.+++.+.++ +.....|-..+ ...+. ...-.++.|||.+|+.|.+.+..+ .. .|.+.+ +.+..+..
T Consensus 191 ~~~~~~~~~~-~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~e-e~l~~y~~ 268 (291)
T d2bdua1 191 NGVLKGFKGE-LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVD-ELLEKYMD 268 (291)
T ss_dssp TSBEEEECSS-CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHH-HHHHHHHH
T ss_pred CeeEeeccCC-ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHH-HHHHHHHh
Confidence 8888888875 33444444333 22222 122357999999999999977654 11 233222 22333445
Q ss_pred CCcee-eeCCC
Q 043920 225 PKPII-FHDGR 234 (504)
Q Consensus 225 ~W~i~-f~~~r 234 (504)
.|.|+ -+|.-
T Consensus 269 ~~DIVl~~d~~ 279 (291)
T d2bdua1 269 SYDIVLVKEES 279 (291)
T ss_dssp HSSEEEETCCB
T ss_pred cCCEEEecCCC
Confidence 68877 55553
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.74 E-value=1.7e-09 Score=101.20 Aligned_cols=61 Identities=16% Similarity=0.162 Sum_probs=51.3
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhccccccCCCceeee
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTCDKLPKPIIFH 231 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~~~~~W~i~f~ 231 (504)
.|.+|..+++.+....++ .+++|||.||+|||+.|+++++| |+++++++.|. ..+|+..|-
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~-~~~~~~~~~ 224 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYD-QWGDSRHYR 224 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHH-HHCCTTEEE
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhh-cccccceEE
Confidence 566798888877655443 56999999999999999999999 89999999999 888887643
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.38 E-value=4.9e-07 Score=82.09 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=54.6
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhH---HHHHHHHhC
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKK---ADALLKAFG 183 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~K---v~~l~~~~~ 183 (504)
+++++++++|..+ |+|++++..++.+.+. +|++ .+++++ +. + .+..+ .+.+.+.++
T Consensus 95 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~----~~-------~----~~Kp~~~~~~~~~~~l~ 158 (218)
T d1te2a_ 95 EAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAE----KL-------P----YSKPHPQVYLDCAAKLG 158 (218)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECT----TS-------S----CCTTSTHHHHHHHHHHT
T ss_pred HHHHHhhhcccccccccccccccccccccc-cccccccccccccc----cc-------c----cchhhHHHHHHHHHHcC
Confidence 4455888999877 6899999999999999 8975 344332 10 0 11112 223333344
Q ss_pred CCC-CeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 184 ETQ-PEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 184 ~~~-~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
-.. -.+.+|||.+|+.+-+.+|-.. .|+
T Consensus 159 ~~~~~~l~igD~~~di~aA~~~G~~~i~v~ 188 (218)
T d1te2a_ 159 VDPLTCVALEDSVNGMIASKAARMRSIVVP 188 (218)
T ss_dssp SCGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCchhcEEEeeCHHHHHHHHHcCCEEEEEC
Confidence 322 2568999999999999999544 443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.24 E-value=4.5e-07 Score=81.90 Aligned_cols=89 Identities=15% Similarity=0.079 Sum_probs=52.0
Q ss_pred cCHHHHH---HHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---h
Q 043920 109 LHPESWR---VFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA---F 182 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~ 182 (504)
++|++.+ ++++++..+|||++....++.+.++ +|++..+-.- +++.-.+ .+.-+.+.++.. +
T Consensus 83 ~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~-~~l~~~f~~i-------~~~~~~~----~~KP~p~~~~~~~~~~ 150 (207)
T d2hdoa1 83 LYPGITSLFEQLPSELRLGIVTSQRRNELESGMRS-YPFMMRMAVT-------ISADDTP----KRKPDPLPLLTALEKV 150 (207)
T ss_dssp ECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTT-SGGGGGEEEE-------ECGGGSS----CCTTSSHHHHHHHHHT
T ss_pred cccchhhhhhhhccccccccccccccccccccccc-cccccccccc-------ccccccc----cchhhhhhhcccccce
Confidence 5566655 5554434457999999999999999 8874322111 1110000 111122333333 3
Q ss_pred CCC-CCeEEEeCCCCCHHHHhhcccCee
Q 043920 183 GET-QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 183 ~~~-~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
+-. .-.+.+|||.+|+..-+.+|-..+
T Consensus 151 ~~~~~~~l~VgDs~~Di~~a~~aG~~~i 178 (207)
T d2hdoa1 151 NVAPQNALFIGDSVSDEQTAQAANVDFG 178 (207)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred eeeccceeEecCCHHHHHHHHHcCCeEE
Confidence 321 225689999999999998888765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.14 E-value=3e-06 Score=76.15 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=57.9
Q ss_pred cCHHHHH---HHhhCCCEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCC
Q 043920 109 LHPESWR---VFSSCGKRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGET 185 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~ 185 (504)
+++.+.+ .++.++..+|+|++++..++.+.+. +|++..+. ..+++.- .+..|...++..+...
T Consensus 85 ~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~gl~~~fd-------~v~~~~~------~~~~~p~~~~~~~~~~ 150 (210)
T d2ah5a1 85 LFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKN-LEIHHFFD-------GIYGSSP------EAPHKADVIHQALQTH 150 (210)
T ss_dssp ECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHH-TTCGGGCS-------EEEEECS------SCCSHHHHHHHHHHHT
T ss_pred chhHHHHHHhhhhcccchhhcccccchhhhHHHHh-hccccccc-------ccccccc------cccccccccchhhhhh
Confidence 4555544 5666776677999999999999999 89753221 1112111 2334555555544433
Q ss_pred CC----eEEEeCCCCCHHHHhhcccC-eeeC
Q 043920 186 QP----EIGLGDRQTDIPFMALCKEG-YLVP 211 (504)
Q Consensus 186 ~~----~~aygDS~~DlpmL~~a~~~-~~Vn 211 (504)
++ .+.+|||.+|+..-+.+|-. +.|.
T Consensus 151 ~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~ 181 (210)
T d2ah5a1 151 QLAPEQAIIIGDTKFDMLGARETGIQKLAIT 181 (210)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred hcccccceeecCCHHHHHHHHHcCCeEEEEc
Confidence 32 56899999999999999964 4554
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.12 E-value=9.7e-06 Score=73.12 Aligned_cols=87 Identities=22% Similarity=0.184 Sum_probs=55.5
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHH---H
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKAD---A 177 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~---~ 177 (504)
++|.+ +++++++|..+ |+|+++...++.+.+. +|++ .++++.- .+ .+..|.+ .
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~-----------~~----~~kp~p~~~~~ 159 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQS-----------LP----EIKPHPAPFYY 159 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTT-----------SS----SCTTSSHHHHH
T ss_pred hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHh-cCchhhccccccccc-----------cc----cccccchhhHH
Confidence 45555 55788899776 6899999999999999 9975 3443331 01 0111222 2
Q ss_pred HHHHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeC
Q 043920 178 LLKAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVP 211 (504)
Q Consensus 178 l~~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vn 211 (504)
+.+..+.. .-.+.+|||.+|+..-+.+|- .+.|+
T Consensus 160 ~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 22333322 235689999999999999884 44554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.10 E-value=4.2e-06 Score=74.96 Aligned_cols=114 Identities=21% Similarity=0.202 Sum_probs=64.8
Q ss_pred cCCCHHHHHHHHHHHcchhh-hcccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeC
Q 043920 86 VGLRVTDIESVARAVLPKFY-ASDLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYK 156 (504)
Q Consensus 86 ~G~~~~~l~~~~~~~~~~~~-~~~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~ 156 (504)
.+...+.++++-..+..+.. ...++|.+ ++.++++|..+ |+|++++.. ..+.++ +|++ .+++++-.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~~-~~~l~~-~gl~~~f~~i~~s~~~--- 133 (204)
T d2go7a1 59 RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNA-FTILKD-LGVESYFTEILTSQSG--- 133 (204)
T ss_dssp HTCCHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHH-HTCGGGEEEEECGGGC---
T ss_pred hhhhHHHHHHHHHHHHHhhcccCcccchHHhhhhcccccccchhhhcccchhh-hhhhhh-cccccccccccccccc---
Confidence 35666666666555544322 12345655 45778899777 689888754 557788 8875 33333210
Q ss_pred CeeeeeEeCCCCCCchhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccC-eeeCCC
Q 043920 157 GRATGLVRDPGVLVGNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEG-YLVPSK 213 (504)
Q Consensus 157 g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~-~~Vnp~ 213 (504)
+ ...+ . .+-.+.+.+.++-. .-.+.+|||.+|+..-+.+|-. +.|.+.
T Consensus 134 ~-----~~Kp---~-~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 134 F-----VRKP---S-PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp C-----CCTT---S-SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred c-----ccch---h-HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 0 0011 1 12222333334432 2256899999999999999854 446543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.93 E-value=1.6e-05 Score=70.32 Aligned_cols=90 Identities=19% Similarity=0.160 Sum_probs=53.2
Q ss_pred ccCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc----EEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 108 DLHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD----LVLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 108 ~~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d----~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
.++|++ +++++++|..+ |+|++.+...+ ..+. +|++ .+++++- .+ ...|+. + =.+.+.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~-~~l~~~fd~i~~~~~-------~~-~~KP~p---~-~~~~~~ 144 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEK-TSIAAYFTEVVTSSS-------GF-KRKPNP---E-SMLYLR 144 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-TTCGGGEEEEECGGG-------CC-CCTTSC---H-HHHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchhh-hhhh-hcccccccccccccc-------cc-ccCCCH---H-HHHHHH
Confidence 355555 44678899776 68988887776 5677 7764 3333321 00 011111 1 122333
Q ss_pred HHhCCCCCeEEEeCCCCCHHHHhhcccCe-eeCC
Q 043920 180 KAFGETQPEIGLGDRQTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 180 ~~~~~~~~~~aygDS~~DlpmL~~a~~~~-~Vnp 212 (504)
+.++.. ..+.+|||..|+..-+.+|-.. .|+.
T Consensus 145 ~~~~~~-~~l~vgDs~~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 145 EKYQIS-SGLVIGDRPIDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp HHTTCS-SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred HHcCCC-CeEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 334543 3789999999999999998774 4443
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.93 E-value=2.5e-05 Score=65.75 Aligned_cols=85 Identities=24% Similarity=0.309 Sum_probs=66.6
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeEE
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPEIG 190 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~a 190 (504)
++++.+++.|..+ ++||-....++.+|+. ||++++++ ++ ..++|+..+++...+ +....
T Consensus 28 ~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~~v~~-----------------~~-~p~~k~~~v~~~q~~-~~v~~ 87 (135)
T d2b8ea1 28 PAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIA-----------------EV-LPHQKSEEVKKLQAK-EVVAF 87 (135)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEEC-----------------SC-CHHHHHHHHHHHTTT-SCEEE
T ss_pred HHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhhhhcc-----------------cc-chhHHHHHHHHHHcC-CEEEE
Confidence 3466889999777 5899999999999999 99987654 13 567899998886543 44456
Q ss_pred EeCCCCCHHHHhhcccCeeeCCCcch
Q 043920 191 LGDRQTDIPFMALCKEGYLVPSKPEV 216 (504)
Q Consensus 191 ygDS~~DlpmL~~a~~~~~Vnp~~~l 216 (504)
.||+.||.|+|+.|+-.++++.....
T Consensus 88 vGDg~nD~~aL~~Advgia~~~~~~~ 113 (135)
T d2b8ea1 88 VGDGINDAPALAQADLGIAVGSGSDV 113 (135)
T ss_dssp EECSSSSHHHHHHSSEEEEECCC---
T ss_pred EeCCCCcHHHHHhCCeeeecCccCHH
Confidence 79999999999999999998754433
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.88 E-value=3.6e-05 Score=69.85 Aligned_cols=91 Identities=19% Similarity=0.032 Sum_probs=54.1
Q ss_pred cCHHH---HHHHhhCC-CEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHH----HHH
Q 043920 109 LHPES---WRVFSSCG-KRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKAD----ALL 179 (504)
Q Consensus 109 ~~~~~---~~~~~~~G-~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~----~l~ 179 (504)
++|++ ++.++++| ..+ |+|++....++.+.+. +|++..+. ...++. ... ....+.. .++
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~gl~~~fd-------~i~~~~---~~~-~~k~~p~~~~~~~~ 159 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFP-------FGAFAD---DAL-DRNELPHIALERAR 159 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCS-------CEECTT---TCS-SGGGHHHHHHHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhh-hccccccc-------cccccc---ccc-cccchhHHHHHHhh
Confidence 44544 55677788 455 6899999999999998 89743221 111110 001 2222222 233
Q ss_pred HHhCCC---CCeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 180 KAFGET---QPEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 180 ~~~~~~---~~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
+..+.. .-.+++|||.+|+.+-+.+|-.. +|.
T Consensus 160 ~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~ 195 (228)
T d2hcfa1 160 RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVA 195 (228)
T ss_dssp HHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEEC
T ss_pred hhcccCCChhHheeecCChHHHHHHHHcCCEEEEEc
Confidence 333311 22578999999999999998764 343
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.83 E-value=2.1e-05 Score=72.95 Aligned_cols=86 Identities=14% Similarity=-0.005 Sum_probs=53.4
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-----EEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHH
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-----VLGTEIATYKGRATGLVRDPGVLVGNKKADALL 179 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-----vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~ 179 (504)
.+|.+ ++.++++|..+ |+|++++..++.+.+. +|++. +++++- .+. ..|++ .-.....
T Consensus 100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~-------~~~-~KP~p----~~~~~~~ 166 (257)
T d1swva_ 100 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDD-------VPA-GRPYP----WMCYKNA 166 (257)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGG-------SSC-CTTSS----HHHHHHH
T ss_pred cCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHH-Hhhccccccccccccc-------ccc-cccCh----HHHHHHH
Confidence 45555 45778899776 6899999999999998 77532 222220 000 01111 1223333
Q ss_pred HHhCCCC--CeEEEeCCCCCHHHHhhcccC
Q 043920 180 KAFGETQ--PEIGLGDRQTDIPFMALCKEG 207 (504)
Q Consensus 180 ~~~~~~~--~~~aygDS~~DlpmL~~a~~~ 207 (504)
+.++... -.+.+|||.+|+..-+.||-.
T Consensus 167 ~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ 196 (257)
T d1swva_ 167 MELGVYPMNHMIKVGDTVSDMKEGRNAGMW 196 (257)
T ss_dssp HHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence 3445432 257899999999999998864
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=97.78 E-value=3.5e-05 Score=70.38 Aligned_cols=86 Identities=13% Similarity=0.083 Sum_probs=54.2
Q ss_pred ccCHHHHHHHhh-CCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHH-----H
Q 043920 108 DLHPESWRVFSS-CGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKA-----D 176 (504)
Q Consensus 108 ~~~~~~~~~~~~-~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv-----~ 176 (504)
..++++.+.+++ +|+.+ ++|.+....++.+.+. +|+ |.+++++- .|..|. +
T Consensus 93 ~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~-----------------~~~~KP~p~~f~ 154 (245)
T d1qq5a_ 93 TPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDA-----------------KRVFKPHPDSYA 154 (245)
T ss_dssp CBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGG-----------------GTCCTTSHHHHH
T ss_pred ccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-ccccccccccccccc-----------------ccccCccHHHHH
Confidence 466777776654 67665 5899999999998888 775 44554431 111231 2
Q ss_pred HHHHHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeC
Q 043920 177 ALLKAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVP 211 (504)
Q Consensus 177 ~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vn 211 (504)
...+.+|-. +-.+.+|||.+|+.--+.+|- .+.||
T Consensus 155 ~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~ 191 (245)
T d1qq5a_ 155 LVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVA 191 (245)
T ss_dssp HHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 223334432 225689999999888888774 44565
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.69 E-value=6.2e-05 Score=68.18 Aligned_cols=187 Identities=11% Similarity=0.086 Sum_probs=112.9
Q ss_pred EEEEecCCccccCCCcHHHHHHHHHHhcchHHHHHHHHhhHHHHHhhcc----ccccHHHHHHHHHH--hcCCCHHHHHH
Q 043920 22 TVVADMDGTLLRGRSSFPYFALVAFEAGGILRLLFLLLASPIAGLLYYL----VSESAGIQVLIFAS--FVGLRVTDIES 95 (504)
Q Consensus 22 ~a~FD~DgTL~~~ds~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~--~~G~~~~~l~~ 95 (504)
+.++|++|-|.-.|-.++..... ...+.+.+.+. .+--.. .+.. +.....+|. +.-+ -.|++.+++.+
T Consensus 1 ~fvtDcEGPlslnDnA~E~~a~~-~~~grfF~~lS---~yDD~L-~~E~~reGY~aG~TLKL-IvPFl~a~Gvt~edL~~ 74 (308)
T d1y8aa1 1 MFFTDWEGPWILTDFALELCMAV-FNNARFFSNLS---EYDDYL-AYEVRREGYEAGYTLKL-LTPFLAAAGVKNRDVER 74 (308)
T ss_dssp EEEECSBTTTBCCCHHHHHHHHH-HCCHHHHHHHH---HHHHHH-HHTTCCTTCCTTTHHHH-HHHHHHHTTCCHHHHHH
T ss_pred CceeccCCCCcccccHHHHHHhc-CCCcchhhhhh---hhhhHH-HHHhhccCCCCccchhh-HHHHHHHhCCCHHHHHH
Confidence 35899999999999888776543 33333333221 111111 1111 111122553 3333 45999999999
Q ss_pred HHHHHcchhhhcccCHHHHH---HHhhCCCEEEEecCcHHHHHHHHHhhcCCc-EEEeeeEEEeCCee-e----------
Q 043920 96 VARAVLPKFYASDLHPESWR---VFSSCGKRCVLTANPRIMVEAFLKDFLAAD-LVLGTEIATYKGRA-T---------- 160 (504)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~---~~~~~G~~vvvSas~~~~v~~ia~~~Lg~d-~vigt~l~~~~g~~-t---------- 160 (504)
++++-+. +-|.+.+ .+++.=..+|||.|...|++.+|.. +|+. ++.+|++..++=-. .
T Consensus 75 fSE~~~~------lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~-~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~ 147 (308)
T d1y8aa1 75 IAELSAK------FVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGVRGELHGTEVDFDSIAVPEGLREELLSII 147 (308)
T ss_dssp HHHHHCC------BCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCSEEEEEBCCGGGCCCCHHHHHHHHHHH
T ss_pred Hhhhcee------ecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhh-cCCCceeecccccccccCCChHHHHHHHHHh
Confidence 8887654 5566655 4444446678999999999999999 9983 69999987651111 0
Q ss_pred ------------------------ee-EeCCCCCCchhHHHHHHHHhCCCC--CeEEEeCCCCCHHHHhhccc----Cee
Q 043920 161 ------------------------GL-VRDPGVLVGNKKADALLKAFGETQ--PEIGLGDRQTDIPFMALCKE----GYL 209 (504)
Q Consensus 161 ------------------------G~-i~g~~~l~g~~Kv~~l~~~~~~~~--~~~aygDS~~DlpmL~~a~~----~~~ 209 (504)
|+ +++...+-|.+|.+.++..+...+ ..+.+|||.+|.+||+.+.. ++.
T Consensus 148 ~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIs 227 (308)
T d1y8aa1 148 DVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIA 227 (308)
T ss_dssp HHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEE
T ss_pred hhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEE
Confidence 11 223323233566666666654333 24578999999999998754 455
Q ss_pred eCCCcchhcccc
Q 043920 210 VPSKPEVKAVTC 221 (504)
Q Consensus 210 Vnp~~~l~~~A~ 221 (504)
.|-...--+.|.
T Consensus 228 FNGN~Yal~eA~ 239 (308)
T d1y8aa1 228 FNGNEYALKHAD 239 (308)
T ss_dssp ESCCHHHHTTCS
T ss_pred ecCccccccccc
Confidence 666554333333
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=97.67 E-value=7e-05 Score=67.15 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=55.6
Q ss_pred cCHHH---HHHHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhHH-----
Q 043920 109 LHPES---WRVFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKKA----- 175 (504)
Q Consensus 109 ~~~~~---~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv----- 175 (504)
.++++ ++.+++.|..+ ++|.+....++.+.+. ++. |.++++.- .|..|.
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~-----------------~~~~KP~p~~~ 155 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDP-----------------VQVYKPDNRVY 155 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGG-----------------GTCCTTSHHHH
T ss_pred ccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeee-----------------eeccccHHHHH
Confidence 44544 55777888776 5899999999998887 664 56655541 111232
Q ss_pred HHHHHHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeC
Q 043920 176 DALLKAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVP 211 (504)
Q Consensus 176 ~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vn 211 (504)
+.+.+.+|-. +-.+.+|||.+|+.--+.+|- +++|+
T Consensus 156 ~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~ 193 (220)
T d1zrna_ 156 ELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWIN 193 (220)
T ss_dssp HHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEc
Confidence 2233334432 225689999999999999994 45676
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.66 E-value=5e-05 Score=68.38 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHcchh---h----hcccCHHH---HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc----EEEeee
Q 043920 87 GLRVTDIESVARAVLPKF---Y----ASDLHPES---WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD----LVLGTE 151 (504)
Q Consensus 87 G~~~~~l~~~~~~~~~~~---~----~~~~~~~~---~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d----~vigt~ 151 (504)
..+.++++++.+.+.+.+ + ...++|++ ++.+++.|..+. +|++. ..+...+. +|+. .+++++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~-~~l~~~f~~i~~~~ 139 (221)
T d1o08a_ 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLER-MNLTGYFDAIADPA 139 (221)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHH-TTCGGGCSEECCTT
T ss_pred cchhhhhhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHh-hccccccccccccc
Confidence 456677766655443221 1 12345555 447788998775 57664 35777787 7864 222221
Q ss_pred EEEeCCeeeeeEeCCCCCCchhHHHHHHHH---hCCCC-CeEEEeCCCCCHHHHhhcc-cCeeeCC
Q 043920 152 IATYKGRATGLVRDPGVLVGNKKADALLKA---FGETQ-PEIGLGDRQTDIPFMALCK-EGYLVPS 212 (504)
Q Consensus 152 l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~~-~~~aygDS~~DlpmL~~a~-~~~~Vnp 212 (504)
..-.+.-+.+.++.. ++... -.+.+|||..|+..-+.+| +.+.|+.
T Consensus 140 ---------------~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 140 ---------------EVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp ---------------TSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred ---------------cccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 000111122333333 33321 2578999999999999998 4566654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.57 E-value=0.00019 Score=64.95 Aligned_cols=85 Identities=20% Similarity=0.128 Sum_probs=53.0
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhH--HHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKK--ADAL 178 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~K--v~~l 178 (504)
.+|++.+ +++ +|.++ ++|.++...++.+.+. +|+ |.+++++- .|..| .+..
T Consensus 101 ~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~-----------------~~~~KP~~~~~ 161 (230)
T d1x42a1 101 LYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEE-----------------AGFFKPHPRIF 161 (230)
T ss_dssp BCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHH-----------------HTBCTTSHHHH
T ss_pred ccccHHHHHHHhh-ccCceeeeeccccccchhhhcc-ccccccccccccccc-----------------ccccchhhHHH
Confidence 4566655 454 56666 6899999999999998 885 55555431 11122 2233
Q ss_pred HHH---hCCC-CCeEEEeCC-CCCHHHHhhcccCe-eeCC
Q 043920 179 LKA---FGET-QPEIGLGDR-QTDIPFMALCKEGY-LVPS 212 (504)
Q Consensus 179 ~~~---~~~~-~~~~aygDS-~~DlpmL~~a~~~~-~Vnp 212 (504)
+.. +|-. +-.+.+||| .+|+..-+.+|-.. .++.
T Consensus 162 ~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~ 201 (230)
T d1x42a1 162 ELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDR 201 (230)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECT
T ss_pred HHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECC
Confidence 332 3322 225689999 58999988887654 3543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.56 E-value=0.00034 Score=63.21 Aligned_cols=92 Identities=9% Similarity=0.099 Sum_probs=55.2
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA--- 181 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~--- 181 (504)
.+|++. +.++++|+++ |+|.++....+...+. +|+....-......+.. . .+.-+.+..+..
T Consensus 128 ~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~---~-------~~KP~p~~~~~~~~~ 196 (253)
T d1zs9a1 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTK---I-------GHKVESESYRKIADS 196 (253)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGG---G-------CCTTCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccc---c-------ccCCCcHHHHHHHHH
Confidence 456554 4777899887 6899999999999998 88643222111111100 0 111222333333
Q ss_pred hCCC-CCeEEEeCCCCCHHHHhhcccCe-eeC
Q 043920 182 FGET-QPEIGLGDRQTDIPFMALCKEGY-LVP 211 (504)
Q Consensus 182 ~~~~-~~~~aygDS~~DlpmL~~a~~~~-~Vn 211 (504)
++-. .-.+.+|||.+|+.--+.+|-.. .|+
T Consensus 197 ~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~ 228 (253)
T d1zs9a1 197 IGCSTNNILFLTDVTREASAAEEADVHVAVVV 228 (253)
T ss_dssp HTSCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence 3321 22578999999999999999644 444
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=2.7e-05 Score=67.80 Aligned_cols=92 Identities=21% Similarity=0.238 Sum_probs=52.7
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHH--
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADAL-- 178 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l-- 178 (504)
+++++.+ .++++|..+ ++|+++....+.....+.| +|.+++++-. + .+.-+.+..
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-----------~----~~Kp~~~~~~~ 149 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL-----------G----MRKPEARIYQH 149 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH-----------T----CCTTCHHHHHH
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccc-----------c----ccccchHHHHH
Confidence 4555544 667888776 5777665544443333113 4666665421 1 011122222
Q ss_pred -HHHhCCCC-CeEEEeCCCCCHHHHhhcc-cCeeeCCCcc
Q 043920 179 -LKAFGETQ-PEIGLGDRQTDIPFMALCK-EGYLVPSKPE 215 (504)
Q Consensus 179 -~~~~~~~~-~~~aygDS~~DlpmL~~a~-~~~~Vnp~~~ 215 (504)
.+.++-.. -.+.+|||.+|+.--+.+| +.+.|++...
T Consensus 150 ~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~ 189 (197)
T d2b0ca1 150 VLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 189 (197)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 23344321 2568999999999999999 5778887654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.41 E-value=0.0017 Score=58.92 Aligned_cols=87 Identities=16% Similarity=0.037 Sum_probs=54.4
Q ss_pred cCHHHHH---HHhhCCCEE-EEecCcHHHHHHHHHhhcCC----cEEEeeeEEEeCCeeeeeEeCCCCCCchhH--H---
Q 043920 109 LHPESWR---VFSSCGKRC-VLTANPRIMVEAFLKDFLAA----DLVLGTEIATYKGRATGLVRDPGVLVGNKK--A--- 175 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~----d~vigt~l~~~~g~~tG~i~g~~~l~g~~K--v--- 175 (504)
.+|++.+ .++ +|..+ |+|.++...++...+. +|+ |.+++++ . .|..| .
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~----------------~-~~~~KP~p~~~ 170 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGG----------------E-QKEEKPAPSIF 170 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGG----------------G-SSSCTTCHHHH
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhh-cccccccccccccc----------------c-cccchhhhhhH
Confidence 5676655 565 46555 6899999999998888 786 3444432 1 22234 1
Q ss_pred HHHHHHhCCC-CCeEEEeCCC-CCHHHHhhcccC-e-eeCCCc
Q 043920 176 DALLKAFGET-QPEIGLGDRQ-TDIPFMALCKEG-Y-LVPSKP 214 (504)
Q Consensus 176 ~~l~~~~~~~-~~~~aygDS~-~DlpmL~~a~~~-~-~Vnp~~ 214 (504)
+.+.+.++.. .-.+.+|||. +|+..-..+|-. + .+++..
T Consensus 171 ~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~ 213 (247)
T d2gfha1 171 YHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSG 213 (247)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred HHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCC
Confidence 2233334432 2256899995 899999999986 3 345533
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.37 E-value=0.00015 Score=65.14 Aligned_cols=98 Identities=10% Similarity=0.002 Sum_probs=56.1
Q ss_pred ccCHHHHHHHhhCC-CEEEEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCC-CCCCchhHHHHHHHHhCCC
Q 043920 108 DLHPESWRVFSSCG-KRCVLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDP-GVLVGNKKADALLKAFGET 185 (504)
Q Consensus 108 ~~~~~~~~~~~~~G-~~vvvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~-~~l~g~~Kv~~l~~~~~~~ 185 (504)
...|.+.+.+++-+ ..+|+|++.+..++.+.+. +|++......+. ++.-.+. .+--..+-.....+.++-.
T Consensus 85 ~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~------~~~~~~~~~~KP~~~~~~~~~~~l~~~ 157 (222)
T d2fdra1 85 KIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIY------SAKDLGADRVKPKPDIFLHGAAQFGVS 157 (222)
T ss_dssp CBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEE------EHHHHCTTCCTTSSHHHHHHHHHHTCC
T ss_pred chhhhHHHHhhhccccceeeeecchhhhhhhhcc-cccccccceeec------ccccccccccccCHHHHHHHHHhhCCC
Confidence 35566666666544 3457899999999999999 898643222111 1110010 0100011223333344432
Q ss_pred C-CeEEEeCCCCCHHHHhhcccC-eeeCC
Q 043920 186 Q-PEIGLGDRQTDIPFMALCKEG-YLVPS 212 (504)
Q Consensus 186 ~-~~~aygDS~~DlpmL~~a~~~-~~Vnp 212 (504)
. -.+.+|||..|+..-+.+|-. +.|+.
T Consensus 158 p~~~l~vgDs~~dv~aA~~aG~~~i~v~~ 186 (222)
T d2fdra1 158 PDRVVVVEDSVHGIHGARAAGMRVIGFTG 186 (222)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred CceEEEEcCCHHHHHHHHHcCCEEEEEcc
Confidence 1 257899999999999998854 45543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.35 E-value=7.1e-05 Score=64.77 Aligned_cols=85 Identities=9% Similarity=-0.020 Sum_probs=52.1
Q ss_pred HHHHHHhhCCCEE-EEecCcH-HHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHH---hCCC-
Q 043920 112 ESWRVFSSCGKRC-VLTANPR-IMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKA---FGET- 185 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~-~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~---~~~~- 185 (504)
+++++++++|..+ |+|.+.+ .+++.+.+. ++++........ . ...|.+.+.+. ++..
T Consensus 53 e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~-----~kp~~~~~~~~~~~~~~~~ 115 (164)
T d1u7pa_ 53 EVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREI-----------Y-----PGSKVTHFERLHHKTGVPF 115 (164)
T ss_dssp HHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEE-----------S-----SSCHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeec-----------c-----cCCChHHHHHHHHHhCCCh
Confidence 4455888999766 6887655 567777787 887533322211 1 11233344433 3322
Q ss_pred CCeEEEeCCCCCHHHHhhcccCeeeCCC
Q 043920 186 QPEIGLGDRQTDIPFMALCKEGYLVPSK 213 (504)
Q Consensus 186 ~~~~aygDS~~DlpmL~~a~~~~~Vnp~ 213 (504)
.-.+.+|||..|+.--+.+|-..+.-++
T Consensus 116 ~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 116 SQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred HHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 2256899999999999988876654443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.31 E-value=9.9e-06 Score=68.83 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=28.8
Q ss_pred chhHHHHHHHHhCCC-CCeEEEeCCCCCHHHHhhcccCee
Q 043920 171 GNKKADALLKAFGET-QPEIGLGDRQTDIPFMALCKEGYL 209 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~-~~~~aygDS~~DlpmL~~a~~~~~ 209 (504)
...|...+++..... .+.+.+||+..|+.+.+.+|-+.+
T Consensus 103 ~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~ 142 (149)
T d1ltqa1 103 DVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECW 142 (149)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred hHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEE
Confidence 456777777765432 234578999999999999998853
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=5.1e-05 Score=70.62 Aligned_cols=52 Identities=13% Similarity=0.314 Sum_probs=41.9
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++......++ .+++|||.||+|||+.|++++++ |..+++++.|.
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~ 243 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR 243 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 455688887776544333 56999999999999999999999 67888998877
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=97.11 E-value=7.6e-05 Score=69.87 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=42.5
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++.+....++ .+++|||.||++||+.|+++++| |.++++++.|.
T Consensus 210 ~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~ 266 (285)
T d1nrwa_ 210 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD 266 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCS
T ss_pred ccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 344688888877654443 56999999999999999999999 68888998887
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.05 E-value=8.1e-05 Score=66.98 Aligned_cols=52 Identities=15% Similarity=0.010 Sum_probs=41.5
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.+..|...++.+....++ .+++|||.||+|||+.|+.+++| |+++.+++.|.
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~ 205 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENAD 205 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCS
T ss_pred CCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCC
Confidence 455788887776543332 56999999999999999999998 68888988776
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=96.99 E-value=0.00059 Score=59.80 Aligned_cols=88 Identities=18% Similarity=0.253 Sum_probs=64.2
Q ss_pred HHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCC----
Q 043920 113 SWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQP---- 187 (504)
Q Consensus 113 ~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~---- 187 (504)
+++.++..|..+ ++|+-....++..++. ++++.++.. ...|...++.+....++
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~~~~~--------------------~~~K~~~l~~~~~~~~i~~~~ 98 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG--------------------KLEKETACFDLMKQAGVTAEQ 98 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES--------------------CSCHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhh-hcccccccc--------------------cccHHHHHHHHHHHhcCCcce
Confidence 355677789665 5899999999999999 888754321 12355555555433332
Q ss_pred eEEEeCCCCCHHHHhhcccCeeeCC-Ccchhcccc
Q 043920 188 EIGLGDRQTDIPFMALCKEGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~~Vnp-~~~l~~~A~ 221 (504)
.+++||+.+|+|||+.|+.++++.- .+..+..|.
T Consensus 99 v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~ 133 (177)
T d1k1ea_ 99 TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVD 133 (177)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSS
T ss_pred eEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCC
Confidence 4478999999999999999999865 667887777
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.92 E-value=0.00013 Score=65.35 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=55.5
Q ss_pred cCHHHHH---HHhhCCCEE-EEec----CcHHHHHHHHHhhcC----CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHH
Q 043920 109 LHPESWR---VFSSCGKRC-VLTA----NPRIMVEAFLKDFLA----ADLVLGTEIATYKGRATGLVRDPGVLVGNKKAD 176 (504)
Q Consensus 109 ~~~~~~~---~~~~~G~~v-vvSa----s~~~~v~~ia~~~Lg----~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~ 176 (504)
.+|++.+ +++++|..+ ++|. +.+...+..... +| +|.+++++-. | ...|+. +--+
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~---~-----~~KP~p----~~~~ 164 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQV---G-----MIKPEP----QIYN 164 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHH---S-----CCTTCH----HHHH
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhc---c-----CCCCCh----HHHH
Confidence 5676655 778899876 5675 344445544443 33 5777776521 0 011111 1111
Q ss_pred HHHHHhCCC-CCeEEEeCCCCCHHHHhhcc-cCeeeCC-Ccchhcccc
Q 043920 177 ALLKAFGET-QPEIGLGDRQTDIPFMALCK-EGYLVPS-KPEVKAVTC 221 (504)
Q Consensus 177 ~l~~~~~~~-~~~~aygDS~~DlpmL~~a~-~~~~Vnp-~~~l~~~A~ 221 (504)
.+.+.++-. .-.+.+||+..|+..-+.+| +.+.|+. ...++.+.+
T Consensus 165 ~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~ 212 (222)
T d1cr6a1 165 FLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEK 212 (222)
T ss_dssp HHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHH
T ss_pred HHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHH
Confidence 222233432 23578999999999999999 4666754 433444443
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.85 E-value=0.0013 Score=57.01 Aligned_cols=105 Identities=15% Similarity=0.078 Sum_probs=70.6
Q ss_pred HHHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCcEEEeeeEEEeCCeeee------------------eEeCCCCCCc
Q 043920 111 PESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAADLVLGTEIATYKGRATG------------------LVRDPGVLVG 171 (504)
Q Consensus 111 ~~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~vigt~l~~~~g~~tG------------------~i~g~~~l~g 171 (504)
+++++.+|+.|.++ ++||-...-+..+|++ +|+.. ...++.+..++| .+-.. + ..
T Consensus 26 ~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~-~p 99 (168)
T d1wpga2 26 MGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFG---ENEEVADRAYTGREFDDLPLAEQREACRRACCFAR-V-EP 99 (168)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSC---TTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES-C-CH
T ss_pred HHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCC---CccccccccccccccchhhHHHHhhhhhhhhhhhc-c-ch
Confidence 34567889999887 5899999999999999 99721 111111111111 11111 3 56
Q ss_pred hhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeCCCcchhcccc
Q 043920 172 NKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVPSKPEVKAVTC 221 (504)
Q Consensus 172 ~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vnp~~~l~~~A~ 221 (504)
++|...++.+-.......+.||+.||.|+|+.|+-.++++-.....+.|.
T Consensus 100 ~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aA 149 (168)
T d1wpga2 100 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTAS 149 (168)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTC
T ss_pred hHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhC
Confidence 78888888764443345579999999999999999999985444544333
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.71 E-value=0.00022 Score=64.53 Aligned_cols=51 Identities=25% Similarity=0.236 Sum_probs=39.3
Q ss_pred chhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 171 GNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
+..|...++......++ .+++|||.||++||+.|+.+++| |.++.++..|.
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSD 204 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCS
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCC
Confidence 44677666655443332 56899999999999999999999 57888887665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.70 E-value=0.00026 Score=64.12 Aligned_cols=51 Identities=16% Similarity=0.265 Sum_probs=35.6
Q ss_pred chhHHHHHHHH---hCCCC--CeEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 171 GNKKADALLKA---FGETQ--PEIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 171 g~~Kv~~l~~~---~~~~~--~~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
|..|...++.+ ++... -.+|+|||.||++||+.|+++++| |+..++.+.|.
T Consensus 177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~~~~~~~ 233 (243)
T d1wzca1 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVS 233 (243)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTCEEES
T ss_pred hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCChHHHhhhh
Confidence 44555555443 33211 246899999999999999999999 67777665443
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.69 E-value=0.00022 Score=66.04 Aligned_cols=52 Identities=21% Similarity=0.292 Sum_probs=40.9
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
.|..|...|+.+....++ .+|+|||.||++||+.|+++++|. ..+++++.|.
T Consensus 183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~ 239 (260)
T d2rbka1 183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD 239 (260)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence 455787777766543332 569999999999999999999986 6788998887
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.00027 Score=65.51 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=41.3
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.+..|...++......++ .+++|||.||++||+.|++++++ |..+++++.|.
T Consensus 194 ~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~ 250 (271)
T d1rkqa_ 194 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN 250 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCS
T ss_pred CCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 344688887776543222 56999999999999999999999 67888988776
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.58 E-value=0.00019 Score=66.81 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=41.9
Q ss_pred CchhHHHHHHHHhCCCCC----eEEEeCCCCCHHHHhhcccCeee-CCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQP----EIGLGDRQTDIPFMALCKEGYLV-PSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~----~~aygDS~~DlpmL~~a~~~~~V-np~~~l~~~A~ 221 (504)
.|..|...++......++ .+|+|||.||+|||+.|++++++ |.++++++.|.
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~ 243 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD 243 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCS
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 455798888876544333 56899999999999999999999 56778998887
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.011 Score=51.71 Aligned_cols=93 Identities=13% Similarity=0.015 Sum_probs=49.0
Q ss_pred cCHHHH---HHHhhCCCEE-EEecCcHH----HHHHHHHh--hcC-CcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHH
Q 043920 109 LHPESW---RVFSSCGKRC-VLTANPRI----MVEAFLKD--FLA-ADLVLGTEIATYKGRATGLVRDPGVLVGNKKADA 177 (504)
Q Consensus 109 ~~~~~~---~~~~~~G~~v-vvSas~~~----~v~~ia~~--~Lg-~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~ 177 (504)
.+|++. +.++++|..+ ++|.+... ..+..... +.+ +|.+++++- + |. ..|+ .+=.+.
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~-~--~~-----~KP~----~~~~~~ 167 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQ-V--GM-----VKPE----PQIYKF 167 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHH-H--TC-----CTTC----HHHHHH
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccc-c--cc-----chhH----HHHHHH
Confidence 566554 4778899776 57865432 22222111 012 577777651 1 10 0111 111123
Q ss_pred HHHHhCCC-CCeEEEeCCCCCHHHHhhccc-CeeeCCC
Q 043920 178 LLKAFGET-QPEIGLGDRQTDIPFMALCKE-GYLVPSK 213 (504)
Q Consensus 178 l~~~~~~~-~~~~aygDS~~DlpmL~~a~~-~~~Vnp~ 213 (504)
+-+.++.. +-.+.+||+..|+..-+.+|- .+.|+..
T Consensus 168 ~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 168 LLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 33334432 225689999999999888887 4456653
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=96.30 E-value=0.00063 Score=62.99 Aligned_cols=51 Identities=18% Similarity=0.254 Sum_probs=39.1
Q ss_pred chhHHHHHHHHhCCCC----CeEEEeCCCCCHHHHhhcccCeeeC-CCcchhcccc
Q 043920 171 GNKKADALLKAFGETQ----PEIGLGDRQTDIPFMALCKEGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 171 g~~Kv~~l~~~~~~~~----~~~aygDS~~DlpmL~~a~~~~~Vn-p~~~l~~~A~ 221 (504)
|..|...++.+....+ -.+++|||.||++||+.+++++++. ..++++++|.
T Consensus 205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~ 260 (283)
T d2b30a1 205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAK 260 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSS
T ss_pred cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCC
Confidence 4457666666544332 2569999999999999999999994 6788888776
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=96.12 E-value=0.00085 Score=59.90 Aligned_cols=42 Identities=19% Similarity=0.454 Sum_probs=30.0
Q ss_pred CchhHHHHHHHHhCC---CC-CeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 170 VGNKKADALLKAFGE---TQ-PEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~---~~-~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
....++++|.+.+.. .. -.+|+|||.||++||+.|+++++|.
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEEe
Confidence 334455556655422 21 2469999999999999999999994
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.66 E-value=0.0022 Score=56.83 Aligned_cols=41 Identities=27% Similarity=0.329 Sum_probs=35.0
Q ss_pred CchhHHHHHHHHhCCCCCeEEEeCCCCCHHHHhhcccCeeeC
Q 043920 170 VGNKKADALLKAFGETQPEIGLGDRQTDIPFMALCKEGYLVP 211 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~~~~aygDS~~DlpmL~~a~~~~~Vn 211 (504)
.|.+|...++.+.... -.+++|||.||++||+.+++.++|.
T Consensus 156 ~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 156 PGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp TTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CCCCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEE
Confidence 5678999999988654 3679999999999999999988774
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.0028 Score=56.38 Aligned_cols=52 Identities=17% Similarity=0.057 Sum_probs=39.1
Q ss_pred CchhHHHHHHHHhCCCC-CeEEEeCCC----CCHHHHhhcc-cCeeeC-CCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQ-PEIGLGDRQ----TDIPFMALCK-EGYLVP-SKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~-~~~aygDS~----~DlpmL~~a~-~~~~Vn-p~~~l~~~A~ 221 (504)
.|-.|...|+.+.+... -.+|+|||. ||++||+.|+ +.++|+ |+..++.+|+
T Consensus 182 ~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~ 240 (244)
T d2fuea1 182 EGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCRE 240 (244)
T ss_dssp TTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHH
T ss_pred hhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHH
Confidence 45679899998875422 246999986 9999999998 799885 6666666554
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.22 E-value=0.05 Score=47.32 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=23.2
Q ss_pred HHHHhCCCC-CeEEEeCCCCCHHHHhhcccC-eeeC
Q 043920 178 LLKAFGETQ-PEIGLGDRQTDIPFMALCKEG-YLVP 211 (504)
Q Consensus 178 l~~~~~~~~-~~~aygDS~~DlpmL~~a~~~-~~Vn 211 (504)
+.+.+|-.. -.+.+|||..|+.--+.+|-. +.|+
T Consensus 168 ~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~ 203 (225)
T d2g80a1 168 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLAS 203 (225)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred HHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEe
Confidence 334445332 256899999999999999963 4455
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=94.06 E-value=0.0045 Score=60.61 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=28.4
Q ss_pred HHHHHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 112 ESWRVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 112 ~~~~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
++++.++++|.++ ++||.+...++.++++ +|+.
T Consensus 222 ~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~ 255 (380)
T d1qyia_ 222 VLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLL 255 (380)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCG
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCc
Confidence 4566888999887 5899999999999999 9974
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.78 E-value=0.029 Score=49.43 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=35.6
Q ss_pred CchhHHHHHHHHhCCCC-CeEEEeC----CCCCHHHHhhcc-cCeeeCCCcchhcccc
Q 043920 170 VGNKKADALLKAFGETQ-PEIGLGD----RQTDIPFMALCK-EGYLVPSKPEVKAVTC 221 (504)
Q Consensus 170 ~g~~Kv~~l~~~~~~~~-~~~aygD----S~~DlpmL~~a~-~~~~Vnp~~~l~~~A~ 221 (504)
.|..|...++...+... -.+++|| |.||++||+.++ ..++|+--...+++|+
T Consensus 182 ~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~~~ 239 (243)
T d2amya1 182 DGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE 239 (243)
T ss_dssp TTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred cccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHHHH
Confidence 45578888887765322 2469999 569999999998 7888875444555443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.52 E-value=0.015 Score=51.49 Aligned_cols=17 Identities=35% Similarity=0.419 Sum_probs=14.8
Q ss_pred cceEEEEecCCccccCC
Q 043920 19 EKHTVVADMDGTLLRGR 35 (504)
Q Consensus 19 ~~~~a~FD~DgTL~~~d 35 (504)
.+++++||+||||++.+
T Consensus 2 ~~kl~~fDlDGTLl~~~ 18 (243)
T d2amya1 2 GPALCLFDVDGTLTAPR 18 (243)
T ss_dssp CSEEEEEESBTTTBCTT
T ss_pred CCEEEEEcCcCCeeCCC
Confidence 46899999999999865
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=91.09 E-value=0.038 Score=50.14 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=22.8
Q ss_pred HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 115 RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 115 ~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
+.++++|+.+ ++||..-..+.++.+. ++++
T Consensus 31 ~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~ 61 (271)
T d1rkqa_ 31 AAARARGVNVVLTTGRPYAGVHNYLKE-LHME 61 (271)
T ss_dssp HHHHHTTCEEEEECSSCGGGTHHHHHH-TTCC
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHH-hcCc
Confidence 3455678776 4899888888888888 8864
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=90.79 E-value=0.17 Score=44.41 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=45.8
Q ss_pred HHHHhhCCCEEE-EecCcHH----HHHHHHHhhcCCcEEEeeeEEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCe
Q 043920 114 WRVFSSCGKRCV-LTANPRI----MVEAFLKDFLAADLVLGTEIATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPE 188 (504)
Q Consensus 114 ~~~~~~~G~~vv-vSas~~~----~v~~ia~~~Lg~d~vigt~l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~ 188 (504)
++.++++|..|+ ||+-.+. .++-+.+. ||+...--..+.+ ++. .. .-..|.+.|++ +++.
T Consensus 95 l~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~-lG~p~~~~~~vll-----~~~----~~-~K~~rr~~Ik~----y~I~ 159 (209)
T d2b82a1 95 IDMHVRRGDAIFFVTGRSPTKTETVSKTLADN-FHIPATNMNPVIF-----AGD----KP-GQNTKSQWLQD----KNIR 159 (209)
T ss_dssp HHHHHHHTCEEEEEECSCCCSSCCHHHHHHHH-TTCCTTTBCCCEE-----CCC----CT-TCCCSHHHHHH----TTEE
T ss_pred HHHHHHcCCeEEEEeCCchhhHHHHHHHHHHH-cCCCcccccceEe-----eCC----CC-CchHHHHHHHH----cCeE
Confidence 346788998886 9885432 33333455 7762100111111 110 01 22347677754 5678
Q ss_pred EEEeCCCCCHHHHhhcc-cCeee
Q 043920 189 IGLGDRQTDIPFMALCK-EGYLV 210 (504)
Q Consensus 189 ~aygDS~~DlpmL~~a~-~~~~V 210 (504)
+.|||+.+|+-=...++ +++.|
T Consensus 160 l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 160 IFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEC
T ss_pred EEecCCHHHHhHHHHcCCCceEe
Confidence 89999999987666555 55544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.49 E-value=0.061 Score=47.09 Aligned_cols=16 Identities=38% Similarity=0.490 Sum_probs=12.8
Q ss_pred eEEEEecCCccccCCC
Q 043920 21 HTVVADMDGTLLRGRS 36 (504)
Q Consensus 21 ~~a~FD~DgTL~~~ds 36 (504)
.+++||+||||++.+.
T Consensus 2 ~i~lFDlDGTLl~~~~ 17 (244)
T d2fuea1 2 VLCLFDVDGTLTPARQ 17 (244)
T ss_dssp EEEEEESBTTTBSTTS
T ss_pred EEEEEccccCccCCCC
Confidence 4677999999997643
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=89.04 E-value=0.077 Score=46.32 Aligned_cols=28 Identities=21% Similarity=0.113 Sum_probs=18.6
Q ss_pred HhhCCCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 117 FSSCGKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 117 ~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
++++|..+ ++||-+-..++++++. ++.+
T Consensus 31 l~~~gi~v~~~TGR~~~~~~~~~~~-~~~~ 59 (230)
T d1wr8a_ 31 AESLGIPIMLVTGNTVQFAEAASIL-IGTS 59 (230)
T ss_dssp HHHTTCCEEEECSSCHHHHHHHHHH-HTCC
T ss_pred HHhCCCeEEEEeCCcHHHHHHHHHh-cCCC
Confidence 33467554 4788777777888777 6653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=86.63 E-value=0.14 Score=44.52 Aligned_cols=30 Identities=7% Similarity=0.039 Sum_probs=22.4
Q ss_pred HHHhhCCCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 115 RVFSSCGKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 115 ~~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
+.++++|+.+ ++||-+...+.++.+. ++++
T Consensus 31 ~~l~~~Gi~~~i~TGR~~~~~~~~~~~-~~~~ 61 (232)
T d1xvia_ 31 TRLREANVPVILCSSKTSAEMLYLQKT-LGLQ 61 (232)
T ss_dssp HHHHHTTCCEEEECSSCHHHHHHHHHH-TTCT
T ss_pred HHHHHCCCEEEEEeCCChhhchhHHHH-hccC
Confidence 3455678665 5899888888888888 8874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.60 E-value=0.11 Score=46.62 Aligned_cols=21 Identities=24% Similarity=0.488 Sum_probs=17.5
Q ss_pred CcceEEEEecCCccccCCCcH
Q 043920 18 REKHTVVADMDGTLLRGRSSF 38 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~~ds~~ 38 (504)
|+.+.++||+||||++++..+
T Consensus 1 M~ik~VifDlDGTL~~~~~~i 21 (250)
T d2c4na1 1 MTIKNVICDIDGVLMHDNVAV 21 (250)
T ss_dssp CCCCEEEEECBTTTEETTEEC
T ss_pred CCCCEEEEECCCeeEECCCcC
Confidence 467899999999999887654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=86.06 E-value=0.13 Score=46.59 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=37.9
Q ss_pred HHhhCCCEE-EEecCcHHHHHHHHHhhcCCcE-EEeeeEEEeCCee----eeeEeCCCCCCchhHHHHHHHHhCCCCC
Q 043920 116 VFSSCGKRC-VLTANPRIMVEAFLKDFLAADL-VLGTEIATYKGRA----TGLVRDPGVLVGNKKADALLKAFGETQP 187 (504)
Q Consensus 116 ~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d~-vigt~l~~~~g~~----tG~i~g~~~l~g~~Kv~~l~~~~~~~~~ 187 (504)
.++++|..+ ++||=+-..++++++. ++++. +++ .||.+ .|++.-... ...+.+..+.+++..+++
T Consensus 29 ~l~~~Gi~~~i~TGR~~~~~~~~~~~-l~~~~~~i~-----~nG~~i~~~~~~~i~~~~-i~~~~~~~i~~~~~~~~~ 99 (285)
T d1nrwa_ 29 QAQRDGIEVVVSTGRAHFDVMSIFEP-LGIKTWVIS-----ANGAVIHDPEGRLYHHET-IDKKRAYDILSWLESENY 99 (285)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHGG-GTCCCEEEE-----GGGTEEECTTCCEEEECC-CCHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHH-hCCCcEEEe-----cCceeEEecCCceeeecc-CCHHHHHHHHHHHHHcCC
Confidence 344578776 4899777778899998 89863 332 23322 133322223 345566677776655554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=85.23 E-value=0.13 Score=46.22 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=12.9
Q ss_pred eEEEEecCCccccCC
Q 043920 21 HTVVADMDGTLLRGR 35 (504)
Q Consensus 21 ~~a~FD~DgTL~~~d 35 (504)
|++|||+||||++.+
T Consensus 2 k~if~DlDGTL~~~~ 16 (260)
T d2rbka1 2 KALFFDIDGTLVSFE 16 (260)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred eEEEEECCCCCcCCC
Confidence 789999999999753
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=84.44 E-value=0.091 Score=46.23 Aligned_cols=33 Identities=24% Similarity=0.123 Sum_probs=23.3
Q ss_pred HHhhCCCEEE-EecCcHHHHHHHHHhhcCCcE-EEe
Q 043920 116 VFSSCGKRCV-LTANPRIMVEAFLKDFLAADL-VLG 149 (504)
Q Consensus 116 ~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d~-vig 149 (504)
.++++|..++ +||-+-..++++.+. +|++. +++
T Consensus 31 ~l~~~g~~v~~~TGr~~~~~~~~~~~-~~~~~~~i~ 65 (225)
T d1l6ra_ 31 SAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFG 65 (225)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEE
T ss_pred HHHHCCCEEEEEcCCchhhhHHHHHH-cCCCceEEe
Confidence 3445787764 788888888888888 88753 443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=84.13 E-value=0.2 Score=45.11 Aligned_cols=16 Identities=31% Similarity=0.547 Sum_probs=13.5
Q ss_pred CcceEEEEecCCcccc
Q 043920 18 REKHTVVADMDGTLLR 33 (504)
Q Consensus 18 ~~~~~a~FD~DgTL~~ 33 (504)
...++++||+||||+.
T Consensus 8 ~~ikli~~DlDGTLl~ 23 (283)
T d2b30a1 8 ADIKLLLIDFDGTLFV 23 (283)
T ss_dssp CCCCEEEEETBTTTBC
T ss_pred cCccEEEEECCCCCcC
Confidence 3567999999999984
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=83.37 E-value=0.18 Score=44.30 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=24.0
Q ss_pred HHHHhhCCCEEE-EecCcHHHHHHHHHhhcCCc
Q 043920 114 WRVFSSCGKRCV-LTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 114 ~~~~~~~G~~vv-vSas~~~~v~~ia~~~Lg~d 145 (504)
++.++++|..++ +||=+...+.++++. ++++
T Consensus 26 i~~l~~~G~~~~~aTGR~~~~~~~~~~~-~~~~ 57 (243)
T d1wzca1 26 IEELKDMGFEIIFNSSKTRAEQEYYRKE-LEVE 57 (243)
T ss_dssp HHHHHHTTEEEEEECSSCHHHHHHHHHH-HTCC
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHH-hccc
Confidence 334556787764 899999999999999 8875
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=83.03 E-value=0.17 Score=45.50 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=18.6
Q ss_pred eEEEeCC-CCCHHHHhhccc-Ceee
Q 043920 188 EIGLGDR-QTDIPFMALCKE-GYLV 210 (504)
Q Consensus 188 ~~aygDS-~~DlpmL~~a~~-~~~V 210 (504)
.+.+||| .+|+.+-+.+|- .++|
T Consensus 205 ~lmVGD~~~~DI~ga~~aG~~si~V 229 (261)
T d1vjra_ 205 MAMVGDRLYTDVKLGKNAGIVSILV 229 (261)
T ss_dssp EEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred cceecCChhHHHHHHHHCCCcEEEE
Confidence 5689999 579999999996 4555
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=82.10 E-value=0.25 Score=44.42 Aligned_cols=65 Identities=5% Similarity=-0.032 Sum_probs=36.6
Q ss_pred hCCCEEEEecCcHHHHHHHHHhhcCCc--EEEeee---EEEeCCeeeeeEeCCCCCCchhHHHHHHHHhCCCCCeE
Q 043920 119 SCGKRCVLTANPRIMVEAFLKDFLAAD--LVLGTE---IATYKGRATGLVRDPGVLVGNKKADALLKAFGETQPEI 189 (504)
Q Consensus 119 ~~G~~vvvSas~~~~v~~ia~~~Lg~d--~vigt~---l~~~~g~~tG~i~g~~~l~g~~Kv~~l~~~~~~~~~~~ 189 (504)
+.|+.+++||-+-..+.++.++ ++.. .++|.. +-..++ +.+... . ...+.+..+.+++.+++..+
T Consensus 33 ~~~~~~i~TGR~~~~~~~~~~~-~~~~~~~~I~~nGa~i~~~~~---~~i~~~-~-i~~~~~~~i~~~~~~~~~~~ 102 (267)
T d1nf2a_ 33 RKCYVVFASGRMLVSTLNVEKK-YFKRTFPTIAYNGAIVYLPEE---GVILNE-K-IPPEVAKDIIEYIKPLNVHW 102 (267)
T ss_dssp TTSEEEEECSSCHHHHHHHHHH-HSSSCCCEEEGGGTEEEETTT---EEEEEC-C-BCHHHHHHHHHHHGGGCCCE
T ss_pred cCCEEEEECCCChHHHHHHHHH-hcccCCceeccCCeEEEeccc---cccccc-C-CCHHHHHHHHHHHHhcCceE
Confidence 3456556899887777777777 5543 245432 111122 233333 3 45667777777777665443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=81.92 E-value=0.24 Score=44.44 Aligned_cols=29 Identities=17% Similarity=0.301 Sum_probs=21.9
Q ss_pred HHhhCCCEE-EEecCcHHHHHHHHHhhcCCc
Q 043920 116 VFSSCGKRC-VLTANPRIMVEAFLKDFLAAD 145 (504)
Q Consensus 116 ~~~~~G~~v-vvSas~~~~v~~ia~~~Lg~d 145 (504)
.++++|+.+ ++||-+...+.++.++ ++.+
T Consensus 31 ~l~~~gi~~~i~TGR~~~~~~~~~~~-l~~~ 60 (269)
T d1rlma_ 31 ELKKRGIKFVVASGNQYYQLISFFPE-LKDE 60 (269)
T ss_dssp HHHHHTCEEEEECSSCHHHHGGGCTT-TTTT
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHH-hCcc
Confidence 344568666 4899888888888888 8875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=81.78 E-value=0.22 Score=43.04 Aligned_cols=12 Identities=42% Similarity=0.664 Sum_probs=11.1
Q ss_pred EEEEecCCcccc
Q 043920 22 TVVADMDGTLLR 33 (504)
Q Consensus 22 ~a~FD~DgTL~~ 33 (504)
+.+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 789999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=80.72 E-value=0.23 Score=44.40 Aligned_cols=23 Identities=35% Similarity=0.216 Sum_probs=19.0
Q ss_pred eEEEeCCC-CCHHHHhhccc-Ceee
Q 043920 188 EIGLGDRQ-TDIPFMALCKE-GYLV 210 (504)
Q Consensus 188 ~~aygDS~-~DlpmL~~a~~-~~~V 210 (504)
.+++|||. +|+.|.+.||- .++|
T Consensus 200 ~l~IGD~~~~DI~~a~~aG~~si~V 224 (253)
T d1yv9a1 200 VIMVGDNYETDIQSGIQNGIDSLLV 224 (253)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred eEEecCChHHHHHHHHHCCCCEEEE
Confidence 57999995 69999999996 5555
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=80.25 E-value=0.31 Score=40.87 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=20.8
Q ss_pred eEEEeCCCCCHHHHhhcccCe-eeCCC
Q 043920 188 EIGLGDRQTDIPFMALCKEGY-LVPSK 213 (504)
Q Consensus 188 ~~aygDS~~DlpmL~~a~~~~-~Vnp~ 213 (504)
.+.+|||..|+.+-+.||-.. +++++
T Consensus 124 ~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 124 SYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp CEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred EEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 468999999999999888654 55654
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=80.09 E-value=0.23 Score=44.54 Aligned_cols=24 Identities=33% Similarity=0.241 Sum_probs=18.9
Q ss_pred eEEEeCCC-CCHHHHhhccc-CeeeC
Q 043920 188 EIGLGDRQ-TDIPFMALCKE-GYLVP 211 (504)
Q Consensus 188 ~~aygDS~-~DlpmL~~a~~-~~~Vn 211 (504)
.+.+|||. +|+.+-+.+|- .++|.
T Consensus 200 ~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 200 AIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred eEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 46899995 59999999996 55663
|