BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043923
(469 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/467 (79%), Positives = 414/467 (88%), Gaps = 3/467 (0%)
Query: 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLD 60
M +LS AT N+HGQDSSYFLGWQEYEKNPY EV N GIIQMGLAENQL FDLLESWL
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 61 RNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA 120
+NP+AA FK++G+SIF ELALFQDYHGLPAFKKA+V+FM+EIRGNKVTFD + +VLTAGA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 121 TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180
TSANET +FCLA+PGEA L+PTPYYPGFDRDLKWRTGVEIVPI CTS NGFQITETA+EE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 181 AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240
AYQ A+KR+L+VKGVLVTNPSNPLGTTM+RNEL LL++ + +K IHLISDEIYSGT FSS
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 241 PGFVSIMEILKDRNC-ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 299
P F+S+ME+LKDRNC EN++VW RVH+VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 300 SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF 359
SFGLVSSQTQ+LLSA+LSDKK T+NYI+EN KRLKQR +KLVSGL+K+GISCL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 360 CWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 419
CWVDMRHLLRSNTFEAEMELWKKIVY+V LNISPGSSCHCTEPGWFRVCFAN+ E TL L
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 420 SMQRLKAFVDSITTTLHNQSNHQS--IKNSRRRSLTKWVFRLSFDDR 464
+MQRLKAFV QS + +SRR+SLTKWV RLSFDDR
Sbjct: 421 AMQRLKAFVGEYYNVPEVNGGSQSSHLSHSRRQSLTKWVSRLSFDDR 467
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/429 (82%), Positives = 393/429 (91%), Gaps = 1/429 (0%)
Query: 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLD 60
M +LS AT N+HGQDSSYFLGWQEYEKNPY EV N GIIQMGLAENQL FDLLESWL
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 61 RNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA 120
+NP+AA FK++G+SIF ELALFQDYHGLPAFKKA+V+FM+EIRGNKVTFD + +VLTAGA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 121 TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180
TSANET +FCLA+PGEA L+PTPYYPGFDRDLKWRTGVEIVPI CTS NGFQITETA+EE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 181 AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240
AYQ A+KR+L+VKGVLVTNPSNPLGTTM+RNEL LL++ + +K IHLISDEIYSGT FSS
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 241 PGFVSIMEILKDRNC-ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 299
P F+S+ME+LKDRNC EN++VW RVH+VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 300 SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF 359
SFGLVSSQTQ+LLSA+LSDKK T+NYI+EN KRLKQR +KLVSGL+K+GISCL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 360 CWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 419
CWVDMRHLLRSNTFEAEMELWKKIVY+V LNISPGSSCHCTEPGWFRVCFAN+ E TL L
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 420 SMQRLKAFV 428
+MQRLKAFV
Sbjct: 421 AMQRLKAFV 429
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/427 (82%), Positives = 392/427 (91%), Gaps = 1/427 (0%)
Query: 3 LLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRN 62
+LS AT N+HGQDSSYFLGWQEYEKNPY EV N GIIQMGLAENQL FDLLESWL +N
Sbjct: 1 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 60
Query: 63 PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATS 122
P+AA FK++G+SIF ELALFQDYHGLPAFKKA+V+FM+EIRGNKVTFD + +VLTAGATS
Sbjct: 61 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 120
Query: 123 ANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAY 182
ANET +FCLA+PGEA L+PTPYYPGFDRDLKWRTGVEIVPI CTS NGFQITETA+EEAY
Sbjct: 121 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 180
Query: 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242
Q A+KR+L+VKGVLVTNPSNPLGTTM+RNEL LL++ + +K IHLISDEIYSGT FSSP
Sbjct: 181 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS 240
Query: 243 FVSIMEILKDRNC-ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF 301
F+S+ME+LKDRNC EN++VW RVH+VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF
Sbjct: 241 FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF 300
Query: 302 GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCW 361
GLVSSQTQ+LLSA+LSDKK T+NYI+EN KRLKQR +KLVSGL+K+GISCL NAGLFCW
Sbjct: 301 GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCW 360
Query: 362 VDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 421
VDMRHLLRSNTFEAEMELWKKIVY+V LNISPGSSCHCTEPGWFRVCFAN+ E TL L+M
Sbjct: 361 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 420
Query: 422 QRLKAFV 428
QRLKAFV
Sbjct: 421 QRLKAFV 427
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/412 (81%), Positives = 374/412 (90%), Gaps = 7/412 (1%)
Query: 18 SYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFR 77
SYFLGWQEYEKNPY EV N GIIQMGLAENQL FDLLESWL +NP+AA FK++G+SIF
Sbjct: 1 SYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFA 60
Query: 78 ELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEA 137
ELALFQDYHGLPAFKKA+V+FM+EIRGNKVTFD + +VLTAGATSANET +FCLA+PGEA
Sbjct: 61 ELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA 120
Query: 138 FLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197
L+PTPYYPGFDRDLKWRTGVEIVPI CTS NGFQITETA+EEAYQ A+KR+L+VKGVLV
Sbjct: 121 VLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLV 180
Query: 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257
TNPSNPLGTTM+RNEL LL++ + +K IHLISDEIYSGT FSSP F+S+ME+LKD
Sbjct: 181 TNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKD----- 235
Query: 258 TQVWNRVHIVYSLS-KDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALL 316
+VW RVH+VYSLS KDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQ+LLSA+L
Sbjct: 236 -EVWQRVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAML 294
Query: 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAE 376
SDKK T+NYI+EN KRLKQR +KLVSGL+K+GISCL NAGLFCWVDMRHLLRSNTFEAE
Sbjct: 295 SDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAE 354
Query: 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428
MELWKKIVY+V LNISPGSSCHCTEPGWFRVCFAN+ E TL L+MQRLKAFV
Sbjct: 355 MELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV 406
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 239/426 (56%), Positives = 324/426 (76%), Gaps = 2/426 (0%)
Query: 3 LLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRN 62
+LS AT HG++S YF GW+ Y+ +P+ ++NP G+IQMGLAENQL DL+E W+ RN
Sbjct: 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRN 60
Query: 63 PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATS 122
P + +G F+ +A FQDYHGLP F+KA+ +FM + RG +V FD ++V+ GAT
Sbjct: 61 PKGS-ICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATG 119
Query: 123 ANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAY 182
ANET++FCLA+PG+AFL+P+PYYP F+RDL+WRTGV+++PI C S N F+IT A++EAY
Sbjct: 120 ANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242
+ AQK ++KVKG+++TNPSNPLGTT+ ++ L +++ + NIHL+ DEIY+ TVF +P
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG 302
FVSI EIL ++ + VHIVYSLSKD+GLPGFRVG IYS +D VV A KMSSFG
Sbjct: 240 FVSIAEILDEQEMTYCNK-DLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFG 298
Query: 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWV 362
LVS+QTQY L+A+LSD+KF N++ E+ RL +RH+ +GLE GI CLK+NAGLFCW+
Sbjct: 299 LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWM 358
Query: 363 DMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQ 422
D+R LLR +TF++EM LW+ I+ DVKLN+SPGSS C EPGWFRVCFANM + T+ +++
Sbjct: 359 DLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALA 418
Query: 423 RLKAFV 428
R++ FV
Sbjct: 419 RIRRFV 424
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 154/348 (44%), Gaps = 31/348 (8%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P ++A+ + + R N + + I++T G + LM + EPG+ ++P P++
Sbjct: 68 GEPRLREAIAQKLQ--RDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWV 125
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +K G ++ + T F+++ Q+ Q K K ++ PSNP G
Sbjct: 126 SYPEMVKLAEGTPVI-LPTTVETQFKVSPE------QIRQAITPKTKLLVFNTPSNPTGM 178
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266
+ +E+ + + E + ++SDEIY ++ +SI + + + R +
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSI-------GAASPEAYERSVV 231
Query: 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQN 324
+K + G+RVG + +V AATK+ S V + QY ++ + +Q+
Sbjct: 232 CSGFAKTYAMTGWRVG-FLAGPVPLVKAATKIQGHSTSNVCTFAQY---GAIAAYENSQD 287
Query: 325 YISENKKRLKQRHRKLVSGLEK-AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKI 383
+ E +R R ++ L G+ C K + + + + RS+ ++ ++
Sbjct: 288 CVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSS-----LDFCSEL 342
Query: 384 VYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431
+ ++ PG++ + R+ +A DT+K M+RL+ F+ I
Sbjct: 343 LDQHQVATVPGAAFGADD--CIRLSYAT-DLDTIKRGMERLEKFLHGI 387
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 169/356 (47%), Gaps = 48/356 (13%)
Query: 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLP 141
+ D G+ ++ + + + E ++ D ++V+T GA A L +PG+ ++
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPD--QVVVTNGAKQALFNAFMALLDPGDEVIVF 131
Query: 142 TPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ--LAQKRHL---KVKGVL 196
+P + V +P + + ET + + +Q L + L K K VL
Sbjct: 132 SPVW------------VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVL 179
Query: 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 256
+ +P+NP G R L LV + ++N ++ISDE+Y V++ F SI+++
Sbjct: 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDV------- 231
Query: 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSA 314
++ ++R+ + SK + G+RVG + S++ V A +K+ S +++ QY A
Sbjct: 232 -SEGFDRIVYINGFSKSHSMTGWRVGYLISSEK-VATAVSKIQSHTTSCINTVAQY---A 286
Query: 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFE 374
L + +Y+ + K+R +V L+K G+ ++ + + +R
Sbjct: 287 ALKALEVDNSYMVQT---FKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG-------- 335
Query: 375 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430
+++ ++++ + K+ + PGS+ +PG+ R+ FA S + L ++ R++ F++S
Sbjct: 336 DDVKFCERLLEEKKVALVPGSA--FLKPGFVRLSFAT-SIERLTEALDRIEDFLNS 388
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 155/363 (42%), Gaps = 52/363 (14%)
Query: 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLP 141
+ D GLP +KA+VE E R N V + +TA T A + + L +PG+ L+P
Sbjct: 74 YGDSEGLPELRKAIVE--REKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVP 131
Query: 142 TPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ-----LAQKRHLKVKGVL 196
P YP + +K+ G P++ ++ EE +Q + +K + K +
Sbjct: 132 GPSYPPYTGLVKFYGGK---PVEYRTIE---------EEDWQPDIDDIRKKITDRTKAIA 179
Query: 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKD 252
V NP+NP G + L ++NI E I +ISDEIY + SPG ++ KD
Sbjct: 180 VINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-----KD 234
Query: 253 RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSND-----DMVVAAATKMSSFGLV-SS 306
V ++ LSK G+R+G +Y D V A +++ L ++
Sbjct: 235 VP---------VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNT 285
Query: 307 QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL-EKAGISCLKSNAGLFCWVDMR 365
Q+ A L+ +Y+ E K+LK+R + L E GIS K + +
Sbjct: 286 PAQFAAIAGLTG---PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPK-- 340
Query: 366 HLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425
+ ++ + E ++++ + GS G FR F E L+ +M R +
Sbjct: 341 --IEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFE 397
Query: 426 AFV 428
F+
Sbjct: 398 KFM 400
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 155/344 (45%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G + A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
+K + G+R+G +++ A A+ +SS S T Q+ L++++
Sbjct: 231 ------GAAKAFAMTGWRIGYACGPKEVIKAMAS-VSSQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 153/337 (45%), Gaps = 40/337 (11%)
Query: 95 LVEFMSEIRGNKVTFDT--SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL 152
L E +SE+ +K D I++T G++ + + + G+ L+ P YP + +
Sbjct: 71 LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFI 130
Query: 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE 212
++ P+ C T ++EEA L+ K K +++ +PSNPLG + R
Sbjct: 131 RFLGAK---PVFC------DFTVESLEEA--LSDK----TKAIIINSPSNPLGEVIDRE- 174
Query: 213 LNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272
+ E ++ISDEIY+G V+ + +I D N E T + N +Y+++
Sbjct: 175 ---IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE---FDENLEKTILINGFSXLYAMT- 227
Query: 273 DLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKR 332
G+R+G + SND+ ++ A K+ +S+ T +AL + +K T+ I+ K
Sbjct: 228 -----GWRIGYVISNDE-IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKE 281
Query: 333 LKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS 392
+R R ++ ++ G + + N E E K++ + + ++
Sbjct: 282 FDRRRRLVLKYVKDFGWEVNNPIGAYYVF--------PNIGEDGREFAYKLLKEKFVALT 333
Query: 393 PGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429
PG + R+ +AN S + +K ++R+K F++
Sbjct: 334 PGIGFGSKGKNYIRISYAN-SYENIKEGLERIKEFLN 369
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
+K + G+R+G +++ A A+ +SS S T Q+ L++++
Sbjct: 231 ------GAAKAFAMTGWRIGYACGPKEVIKAMAS-VSSQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 155/344 (45%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
++++ G+R+G +++ A A+ +SS S T Q+ L++++
Sbjct: 231 GAAXAFAMT------GWRIGYACGPKEVIKAMAS-VSSQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G + A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
+K + G+R+G +++ A A+ +S S T Q+ L++++
Sbjct: 231 ------GAAKAFAMTGWRIGYACGPKEVIKAMAS-VSRQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G + A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
+K + G+R+G +++ A A+ +S S T Q+ L++++
Sbjct: 231 ------GAAKAFAMTGWRIGYACGPKEVIKAMAS-VSRQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++AL E R N ++ + ++T G + A L + +PG+ ++ +PY+
Sbjct: 69 GIPELREALAEKFR--RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWV 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ +++ GV +V ++ GF + + ++ + + K ++V +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVETLPEEGF------VPDPERVRRAITPRTKALVVNSPNNPTGA 179
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS----SPGFVSIMEILKDRNCENTQVWN 262
+ L L + E + +L+SDEIY ++ SPG V+ E+T N
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA---------PEHTLTVN 230
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKK 320
+K + G+R+G +++ A A+ +S S T Q+ L++++
Sbjct: 231 ------GAAKAFAMTGWRIGYACGPKEVIKAMAS-VSRQSTTSPDTIAQWATLEALTNQE 283
Query: 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380
++ ++ ++ ++R L+ GL G+ ++ + + +D + AE L
Sbjct: 284 ASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL- 342
Query: 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424
+ + + PG+ G R+ +A SE+ L+ +++R
Sbjct: 343 -----EAGVAVVPGTDFAAF--GHVRLSYAT-SEENLRKALERF 378
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 123/282 (43%), Gaps = 23/282 (8%)
Query: 78 ELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEA 137
E+ + G+ ++A + R +V +++T G + A +A PG+
Sbjct: 71 EVVYYSHSAGIWELREAFASYYK--RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDE 128
Query: 138 FLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197
L+ P+Y ++ K GV+++P+ GF I + L + + KG+++
Sbjct: 129 ILVLEPFYANYNAFAKI-AGVKLIPVTRRXEEGFAIPQ-------NLESFINERTKGIVL 180
Query: 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257
+NP NP G ++E LV I + LI DE+YS VF F S + I D
Sbjct: 181 SNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASALSIESD----- 234
Query: 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLS 317
+V ++ S+S G RVG + + ++ +++ A K++ L + + S L
Sbjct: 235 -----KVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGSVGLL 289
Query: 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF 359
+ ++ ++ ++R ++ LE+ G+ +G F
Sbjct: 290 N--LDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAF 329
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 149/354 (42%), Gaps = 47/354 (13%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+P ++A+ + + ++ ++ IV T G+ LM + G+ L+P P YP
Sbjct: 76 GIPRLRRAISHWYRDRYDVQIDPESEAIV-TIGSKEGLAHLMLATLDHGDTILVPNPSYP 134
Query: 147 -GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205
+ V VP+ ++ F E AI E+ K + +++ PSNP
Sbjct: 135 IHIYGAVIAGAQVRSVPL-VPGIDFFNELERAIRESIP-------KPRMMILGFPSNPTA 186
Query: 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEI--LKDRNCENTQVWNR 263
+ + +V + + ++ ++ D Y+ V+ SIM++ KD E
Sbjct: 187 QCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVE------- 239
Query: 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKF 321
++LSK + G+R+G + N ++V A A S +G + ++AL D
Sbjct: 240 ---FFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGD--- 293
Query: 322 TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWK 381
Q + + ++ +QR LV GL +AG A ++ W + +E K
Sbjct: 294 -QQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWA---KIPEPYAHLGSLEFAK 349
Query: 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM----QRLKAFVDSI 431
K++ D K+++SPG + F + +D ++ ++ RL+ V I
Sbjct: 350 KLLQDAKVSVSPG------------IGFGDYGDDHVRFALIENRDRLRQAVRGI 391
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 50/338 (14%)
Query: 85 YHGLPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCLAEPGEAFLLPTP 143
+HG AFK+A+V+F R VT D ++ + G + + C+ PG+ LLP P
Sbjct: 84 FHGKEAFKQAIVDFYQ--RQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDP 141
Query: 144 YYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL------KVKGVLV 197
Y + GV + + LN +E + L + K K + +
Sbjct: 142 GY------TDYLAGVLLADGKPVPLN--------LEPPHYLPDWSKVDSQIIDKTKLIYL 187
Query: 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257
T P+NP G+T ++ + + + ++ D Y F + IL N ++
Sbjct: 188 TYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKN----PSILASENGKD 243
Query: 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-----AATKMSSFGLVSSQTQYLL 312
+ +YSLSK GFRVG N D + A T FG + Y L
Sbjct: 244 VAIE-----IYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYAL 298
Query: 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNT 372
+ +++ E K R + + L KA + + + G++ W++ S
Sbjct: 299 NHY-------DDFLEEQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLETPPGYDSEQ 351
Query: 373 FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410
FE + K I+ ++PG + R+ A
Sbjct: 352 FEQFLVQEKSIL------VAPGKPFGENGNRYVRISLA 383
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 146/352 (41%), Gaps = 51/352 (14%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
GLPA ++AL E + + +V+T+GAT A L+ L PG+ ++ P++
Sbjct: 62 GLPALREALAE--------EFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFD 113
Query: 147 GFDRDLKWRTGVE--IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL 204
+ D + G + +V + T GF++ +A+E+A + + +L+ P NP
Sbjct: 114 VYLPD-AFLAGAKARLVRLDLTP-EGFRLDLSALEKALTP------RTRALLLNTPMNPT 165
Query: 205 GTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264
G EL + + ++ LISDE+Y + + R R
Sbjct: 166 GLVFGERELEAIARLARAHDLFLISDEVYDELYYGE----------RPRRLREF-APERT 214
Query: 265 HIVYSLSKDLGLPGFRVGAIYSNDDMV--VAAATKMSSFGLVSSQTQYLLSALLSDKKFT 322
V S K L G+RVG I + + +A + +SF + + AL ++
Sbjct: 215 FTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-- 272
Query: 323 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWK- 381
+ + ++ ++R L GL G+ F AE+ W
Sbjct: 273 EGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLM-------------AELPGWDA 319
Query: 382 -KIVYDVKLNISPGSSCHCTEPG--WFRVCFANMSEDTLKLSMQRLKAFVDS 430
++V + ++ + P S+ + +P FR F +E+ L L+++RL V+S
Sbjct: 320 FRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNS 370
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 16/288 (5%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G PA KAL +I ++ +I++ GA + + L +PG+ ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQID-PNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 147 GFDRDLKWRTGVEI-VPIQCTSLNGFQITETAIE-EAYQLAQKRHLKVKGVLVTNPSNPL 204
++ ++ V + +P++ +G + T + + +L K K K +++ P NPL
Sbjct: 121 CYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPL 180
Query: 205 GTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264
G +R EL ++ ++ + + ISDE+Y V++ V I + +W R
Sbjct: 181 GKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATL--------PGMWERT 232
Query: 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLS-ALLSDKKFT 322
+ S K + G+++G ++ T + +SF ++ Q L+ A D K
Sbjct: 233 ITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRM 292
Query: 323 QN---YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367
+ Y + K L+ + ++V L G+ + + G F D+ L
Sbjct: 293 DDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSL 340
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY 145
G PAFKK++ + + ++ +I+ T GAT AN +++ L EPG+ + P Y
Sbjct: 63 EGSPAFKKSVSQLYTGVK-------PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTY 115
Query: 146 PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205
D+ G E+ Q NG+ + + +L Q K + + N +NP G
Sbjct: 116 QQL-YDIPKSLGAEVDLWQIEEENGW------LPDLEKLRQLIRPTTKXICINNANNPTG 168
Query: 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265
R L LV I +E +++SDE+Y FS SI+E V+++
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRS--FSELDVPSIIE-----------VYDKGI 215
Query: 266 IVYSLSKDLGLPGFRVGAIYSN 287
V SLS LPG R+G + +N
Sbjct: 216 AVNSLSXTYSLPGIRIGWVAAN 237
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 50/331 (15%)
Query: 92 KKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL----AEPGEAFLLPTPYYPG 147
+ A+ EF++ G F+ + T GA + +L C ++ + F+ PY+P
Sbjct: 82 RAAIAEFLNNTHGTH--FNADNLYXTXGAAA---SLSICFRALTSDAYDEFITIAPYFPE 136
Query: 148 FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT 207
+ + G +V + + + FQI A+EE + + +GV++ +P+NP GT
Sbjct: 137 Y-KVFVNAAGARLVEVPADTEH-FQIDFDALEE------RINAHTRGVIINSPNNPSGTV 188
Query: 208 MSRNELNLLVNIITEKN------IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261
S + L +++ +K+ I +I+DE Y V+ + T+ +
Sbjct: 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-----------TKYY 237
Query: 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKF 321
+ + YS SK L LPG R+G + D++ A + G Y+ + L K
Sbjct: 238 DNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCG-AGRALGYVCAPSLFQKXI 296
Query: 322 TQNYISENKKRLKQRHRKLV-SGLEKAGISCLKSNAGLFCWVDMRHLLRSNTF--EAEME 378
+ + + +R L+ GL + G C K + + +V SN F +A+ E
Sbjct: 297 VKCQGATGDINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFVKALE-DDSNAFCEKAKEE 355
Query: 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409
DV + + G C PGW R+ +
Sbjct: 356 -------DVLIVAADGFGC----PGWVRISY 375
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 125/288 (43%), Gaps = 16/288 (5%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G PA KAL +I ++ +I++ GA + + L +PG+ ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQID-PNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 147 GFDRDLKWRTGVEI-VPIQCTSLNGFQITETAIE-EAYQLAQKRHLKVKGVLVTNPSNPL 204
++ ++ V + +P++ +G + T + + +L K K K +++ P NPL
Sbjct: 121 CYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPL 180
Query: 205 GTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264
G +R EL ++ ++ + + ISDE+Y V++ V I + +W R
Sbjct: 181 GKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATL--------PGMWERT 232
Query: 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLS-ALLSDKKFT 322
+ S + G+++G ++ T + +SF ++ Q L+ A D K
Sbjct: 233 ITIGSAGXTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRM 292
Query: 323 QN---YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367
+ Y + K L+ + ++V L G+ + + G F D+ L
Sbjct: 293 DDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSL 340
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 147/342 (42%), Gaps = 28/342 (8%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
GL ++A+ E + + G + T +VL GA A + + GE L+PTP +
Sbjct: 63 GLLELREAIAEKLKKQNGIEADPKTEIMVLL-GANQAFLMGLSAFLKDGEEVLIPTPAFV 121
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ + G + V + + F++ +L + K + +++ +P NP G
Sbjct: 122 SYAPAVILAGG-KPVEVPTYEEDEFRLN------VDELKKYVTDKTRALIINSPCNPTGA 174
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266
+++ +L + + + E ++ +ISDE+Y ++ SI + ++ R
Sbjct: 175 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASL--------DGMFERTIT 226
Query: 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKKFTQN 324
V SK + G+R+G + + ++ K + T QY + L D++ +
Sbjct: 227 VNGFSKTFAMTGWRLGFV-AAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDER-SWK 284
Query: 325 YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL-LRSNTFEAEMELWKKI 383
+ E +K +R + + L + G+ +K + + +R L S F M
Sbjct: 285 AVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELM------ 338
Query: 384 VYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425
+ + ++ + PGS+ G+ R+ +A E L+ +M+R++
Sbjct: 339 LKEARVAVVPGSAFGKAGEGYVRISYATAYE-KLEEAMERME 379
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 146/342 (42%), Gaps = 28/342 (8%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
GL ++A+ E + + G + T +VL GA A + + GE L+PTP +
Sbjct: 64 GLLELREAIAEKLKKQNGIEADPKTEIMVLL-GANQAFLMGLSAFLKDGEEVLIPTPAFV 122
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ + G + V + + F++ +L + K + +++ +P NP G
Sbjct: 123 SYAPAVILAGG-KPVEVPTYEEDEFRLN------VDELKKYVTDKTRALIINSPCNPTGA 175
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266
+++ +L + + + E ++ +ISDE+Y ++ SI + ++ R
Sbjct: 176 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASL--------DGMFERTIT 227
Query: 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT--QYLLSALLSDKKFTQN 324
V SK + G+R+G + + ++ K + T QY + L D++ +
Sbjct: 228 VNGFSKTFAMTGWRLGFV-AAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDER-SWK 285
Query: 325 YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL-LRSNTFEAEMELWKKI 383
+ E +K +R + + L + G+ +K + + +R L S F M
Sbjct: 286 AVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELM------ 339
Query: 384 VYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425
+ + ++ + PGS+ G+ R+ +A E L+ +M R++
Sbjct: 340 LKEARVAVVPGSAFGKAGEGYVRISYATAYE-KLEEAMDRME 380
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 27/293 (9%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P +AL + S++ + +++++T GA A + + G+ ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTIN-PMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFD 136
Query: 147 GFDRDLKWRTGV-EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205
++ +K G+ +P++ G + + + +L + K K +++ P NPLG
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLG 196
Query: 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265
M R EL ++ N+ + N+ +SDE+Y VF F I R C +W R
Sbjct: 197 KVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHI------RICTLPGMWERTI 248
Query: 266 IVYSLSKDLGLPGFRVGAIYSNDDM-----------VVAAATKMSSFGLVSSQTQYLLSA 314
+ S K L G+++G Y + + V AT + V +T+
Sbjct: 249 TIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETE----- 303
Query: 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367
L K + Y + L + + S L + G++ G F D L
Sbjct: 304 -LKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 23/294 (7%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P K L F E+ G ++ +++T G A T L + G+ ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 147 GFDRDLKWRTGVEIV------PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP 200
++ G + PIQ L + + +LA K + K +++ P
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGS---SSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 201 SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV 260
+NPLG SR EL L+ ++ + ++ I+DE+Y V+ +SI + +
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL--------PGM 235
Query: 261 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLSALLSDK 319
W R + S K G++VG + D ++ T +S +Q+Q ++ +
Sbjct: 236 WERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFERE 295
Query: 320 K--FTQ--NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR 369
+ F Q +Y + + +++ ++ L+ G+ L F D+ R
Sbjct: 296 QLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKR 349
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 27/293 (9%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P +AL + S++ + +++++T GA A + + G+ ++ P++
Sbjct: 78 GHPRLVQALSKLYSQLVDRTIN-PMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFD 136
Query: 147 GFDRDLKWRTGV-EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205
++ +K G+ +P++ G + + + +L + K K +++ P NPLG
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLG 196
Query: 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265
M R EL ++ N+ + N+ +SDE+Y VF F I R C +W R
Sbjct: 197 KVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHI------RICTLPGMWERTI 248
Query: 266 IVYSLSKDLGLPGFRVGAIYSNDDM-----------VVAAATKMSSFGLVSSQTQYLLSA 314
+ S L G+++G Y + + V AT + V +T+
Sbjct: 249 TIGSAGXTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETE----- 303
Query: 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367
L K + Y + L + + S L + G++ G F D L
Sbjct: 304 -LKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 119/294 (40%), Gaps = 23/294 (7%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P K L F E+ G ++ +++T G A T L + G+ ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 147 GFDRDLKWRTGVEIV------PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP 200
++ G + PIQ L + + +LA K + K +++ P
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGS---SSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 201 SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV 260
+NPLG SR EL L+ ++ + ++ I+DE+Y V+ +SI + +
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL--------PGM 235
Query: 261 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLSALLSDK 319
W R + S G++VG + D ++ T +S +Q+Q ++ +
Sbjct: 236 WERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFERE 295
Query: 320 K--FTQ--NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR 369
+ F Q +Y + + +++ ++ L+ G+ L F D+ R
Sbjct: 296 QLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKR 349
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 132/346 (38%), Gaps = 41/346 (11%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
GLPA ++ + E G V D ++V+T G++ L + G+ + P YP
Sbjct: 69 GLPALRQRIARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL--AQKRHLKVKGVLVTNPSNPL 204
+ + L+ + +VP+ TA E Q A L + G+ V +P+NP
Sbjct: 127 SYRQILR---ALGLVPVDLP---------TAPENRLQPVPADFAGLDLAGLXVASPANPT 174
Query: 205 GTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264
GT + L+ + ISDEIY G + + ++ ++ +
Sbjct: 175 GTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL------------ELTDEC 222
Query: 265 HIVYSLSKDLGLPGFRVG-AIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQ 323
+++ S SK G+RVG + D + V + F +Q A L Q
Sbjct: 223 YVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQNXFICAPHASQVAALAALDCDAELQ 282
Query: 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF-CWVDMRHLL-RSNTFEAEMELWK 381
N K + + L KAG + + G F + D+ L S F AE+
Sbjct: 283 ----ANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKA 338
Query: 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427
+ L+ P G R +A + D ++ + RL+AF
Sbjct: 339 GVAVTPGLDFDPERGA-----GTLRFSYARATAD-IEEGLDRLEAF 378
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 119/294 (40%), Gaps = 23/294 (7%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P K L F E+ G ++ +++T G A T L + G+ ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEID-PLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 147 GFDRDLKWRTGVEIV------PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP 200
++ G + PIQ L + + +LA K + K +++ P
Sbjct: 127 CYEPMTMMAGGRPVFVSLKPGPIQNGELGS---SSNWQLDPMELAGKFTSRTKALVLNTP 183
Query: 201 SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV 260
+NPLG SR EL L+ ++ + ++ I+DE+Y V+ +SI + +
Sbjct: 184 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL--------PGM 235
Query: 261 WNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLSALLSDK 319
W R + S G++VG + D ++ T +S +Q+Q ++ +
Sbjct: 236 WERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFERE 295
Query: 320 K--FTQ--NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR 369
+ F Q +Y + + +++ ++ L+ G+ + F D+ R
Sbjct: 296 QLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKR 349
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 106 KVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165
K T +VL +G + + + + G+ L+P P +P ++ K G+ + C
Sbjct: 99 KSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCK-AYGIGMHFYNC 157
Query: 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225
N + E ++E +L K K ++VTNPSNP G+ SR + +V + E +
Sbjct: 158 RPENDW---EADLDEIRRLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL 211
Query: 226 HLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN------RVHIVYSLSKDLGLPGF 279
L SDEIY+G VF KD N T V + RV I+ + +L +PG+
Sbjct: 212 PLFSDEIYAGMVFKG----------KDPNATFTSVADFETTVPRV-ILGGTAXNLVVPGW 260
Query: 280 RVG 282
R+G
Sbjct: 261 RLG 263
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 146/346 (42%), Gaps = 40/346 (11%)
Query: 97 EFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKW 154
E S + + ++LT+G + A E + LA PG+ L+P P GF R L
Sbjct: 81 EVASYYHCPEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRP---GFSLYRTLAE 137
Query: 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
G+E+ ++I + QL K ++V NPSNP G+ S+ L
Sbjct: 138 SMGIEVKLYNLLPEKSWEI------DLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQ 191
Query: 215 LLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274
++ + + + +++DEIY VFS + + + +T V + L+
Sbjct: 192 KILAVAERQCVPILADEIYGDMVFSDCKYEPMATL-------STNV--PILSCGGLAXRW 242
Query: 275 GLPGFRVGAIYSND------DMVVAAATKMSSFGL-VSSQTQYLLSALLSDKKFTQNYIS 327
+PG+R+G I +D + + K+S L + Q L ++L ++ Q +
Sbjct: 243 LVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSIL--QRTPQEFYQ 300
Query: 328 ENKKRLKQRHRKLVSGLEK-AGISCLKSNAGLFCWV--DMRHLLRSNTFEAEMELWKKIV 384
+ LK L G+ ++ + ++ V +M H FE ++E ++++
Sbjct: 301 DTLSFLKSNADLCYGALSAIPGLQPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLI 357
Query: 385 YDVKLNISPGSSCHCTE-PGWFRVCFANMSEDTLKLSMQRLKAFVD 429
+ ++ P + C E P +FRV + E + + R++ F +
Sbjct: 358 AEQSVHCLPAT---CFEYPNFFRVVI-TVPEVMMLEACSRIQEFCE 399
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 31/285 (10%)
Query: 107 VTFDT-SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW----RTGVEIV 161
V +D +++++T GAT A + L EPG LL P+Y + + R V +V
Sbjct: 81 VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140
Query: 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIIT 221
P GF + A+ A + + +++ +P NP G +S EL + I
Sbjct: 141 P----DGRGFALDADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAV 190
Query: 222 EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV 281
N+ +I+DE+Y VF + + D E T + +++ + G+++
Sbjct: 191 AANLVVITDEVYEHLVFDHARHLPLAGF--DGMAERTITISSAAXMFNCT------GWKI 242
Query: 282 GAIYSNDDMVV---AAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHR 338
G +++ AA +S G Q L+ D +++ + L+ R
Sbjct: 243 GWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDA-----WVAALRNSLRARRD 297
Query: 339 KLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKI 383
+L +GL + G + S F D R L ++ E L +K+
Sbjct: 298 RLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKV 342
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 97 EFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKW 154
E S + + ++LT+G + A + + LA PG+ L+P P GF + L
Sbjct: 104 EIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRP---GFSLYKTLAE 160
Query: 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
G+E+ ++I +E Y + +K ++V NPSNP G+ S+ L
Sbjct: 161 SMGIEVKLYNLLPEKSWEIDLKQLE--YLIDEK----TACLIVNNPSNPCGSVFSKRHLQ 214
Query: 215 LLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS--LSK 272
++ + + + +++DEIY VFS + + + D V I+ L+K
Sbjct: 215 KILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTD-----------VPILSCGGLAK 263
Query: 273 DLGLPGFRVGAIYSND 288
+PG+R+G I +D
Sbjct: 264 RWLVPGWRLGWILIHD 279
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 146/355 (41%), Gaps = 38/355 (10%)
Query: 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLL 140
++ +G+P ++ L F+ + + + IV+T G T A + L L +PG+ +
Sbjct: 70 MYTPANGIPELREELAAFLK--KYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVIT 127
Query: 141 PTPYYP----GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196
P Y F++ +E VP+ + + E I+E QK L +
Sbjct: 128 ENPSYINTLLAFEQ---LGAKIEGVPVDNDGMR-VDLLEEKIKELKAKGQKVKL-----I 178
Query: 197 VTNPS--NPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254
T P+ NP+G TMS L+ I ++ ++ +I D Y+ + V + +
Sbjct: 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPL------KA 232
Query: 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQ-TQYLLS 313
+N RV + +LSK LG GFR+G I + +++ + + +QY+
Sbjct: 233 LDNE---GRVIVAGTLSKVLGT-GFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIAL 288
Query: 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK--AGISCLKSNAGLFCWVDMRHLLRSN 371
L F + ++ K++ ++ LE K AG+F +
Sbjct: 289 EYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGI 348
Query: 372 TFEAEMELWKKIVYDVKLNISPGSSCHCTEPG--WFRVCFANMSEDTLKLSMQRL 424
+F E+ + +V + PG + E G R+ F+ S++ + + +++L
Sbjct: 349 SFANELMEREGVV------VVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 133/319 (41%), Gaps = 31/319 (9%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI-VPIQCTSLNGFQ 172
I++T+G+ A + + PG+ ++ P Y + + I +P+ + +
Sbjct: 143 IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMK-VE 201
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPS--NPLGTTMSRNELNLLVNIITEKNIHLISD 230
I E ++E + + KVK V+ T P+ NP G TM+ + L+ + +E + ++ D
Sbjct: 202 ILEEKLKEL----KSQGKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVED 256
Query: 231 EIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM 290
+ Y +S ++ + RV + + SK L PGFR+G + + +
Sbjct: 257 DPYGELRYSGN---------PEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGI 306
Query: 291 VVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK---A 347
+ S L ++ +++ D + + +I E +K K R ++ LE+
Sbjct: 307 IRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE 366
Query: 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSS--CHCTEPGWF 405
G+ K G+F WV + + S E + K + Y PG + H
Sbjct: 367 GVKWTKPEGGMFIWVTLPDGIDSKKM-LERAIKKGVAY------VPGEAFYAHRDVKNTM 419
Query: 406 RVCFANMSEDTLKLSMQRL 424
R+ F + ED + ++RL
Sbjct: 420 RLNFTYVDEDKIMEGIKRL 438
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 133/319 (41%), Gaps = 31/319 (9%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI-VPIQCTSLNGFQ 172
I++T+G+ A + + PG+ ++ P Y + + I +P+ + +
Sbjct: 98 IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMK-VE 156
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPS--NPLGTTMSRNELNLLVNIITEKNIHLISD 230
I E ++E + + KVK V+ T P+ NP G TM+ + L+ + +E + ++ D
Sbjct: 157 ILEEKLKEL----KSQGKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVED 211
Query: 231 EIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM 290
+ Y +S ++ + RV + + SK L PGFR+G + + +
Sbjct: 212 DPYGELRYSGN---------PEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGI 261
Query: 291 VVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK---A 347
+ S L ++ +++ D + + +I E +K K R ++ LE+
Sbjct: 262 IRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE 321
Query: 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSS--CHCTEPGWF 405
G+ K G+F WV + + S E + K + Y PG + H
Sbjct: 322 GVKWTKPEGGMFIWVTLPDGIDSKKM-LERAIKKGVAY------VPGEAFYAHRDVKNTM 374
Query: 406 RVCFANMSEDTLKLSMQRL 424
R+ F + ED + ++RL
Sbjct: 375 RLNFTYVDEDKIMEGIKRL 393
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 150/379 (39%), Gaps = 29/379 (7%)
Query: 77 RELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLM-FCLAEPG 135
R + G+ + A+ ++ G D I LT GA+ +M +
Sbjct: 125 RATGAYSHSQGIHGLRDAIASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIRNEK 182
Query: 136 EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195
+ L+P P YP + + G +VP G+ + + +++ + A+ R + V+ +
Sbjct: 183 DGILVPIPQYPLYSASIALHGGA-LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRAL 241
Query: 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF-SSPGFVSIMEILKDRN 254
+V NP NP G ++ +V + + L++DE+Y ++ + F S +I++
Sbjct: 242 VVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLG 301
Query: 255 CENTQVWNRVHIVYSLSKD-LGLPGFRVG--AIYSNDDMVVAAATKMSSFGLVSSQTQYL 311
+ + S+SK G G R G I V K++S L S+ T +
Sbjct: 302 YGEEDL--PLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQI 359
Query: 312 LSALLSD--KKFTQNYISENKKR------LKQRHRKLVSGLEK-AGISCLKSNAGLFCWV 362
L++L+ + K ++Y S ++ L +R + L K GI+C ++ ++ +
Sbjct: 360 LASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFP 419
Query: 363 DMRHLLRSNTFEAEMELWK--------KIVYDVKLNISPGSSCHCTEPGWFRVCFANMSE 414
+ L EA K +++ + + PGS W C E
Sbjct: 420 QI--CLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQE 477
Query: 415 DTLKLSMQRLKAFVDSITT 433
D + + R F ++ +
Sbjct: 478 DKIPAVISRFTVFHEAFMS 496
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 140/345 (40%), Gaps = 34/345 (9%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G+ A ++A+ + + G + D S I +TAGAT A + L G+ + P Y
Sbjct: 68 GVQALREAIAQKTERLYGYQPDAD-SDITVTAGATEALYAAITALVRNGDEVICFDPSYD 126
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ + G+ ++ +L E A L+++ L V++ P NP T
Sbjct: 127 SYAPAIALSGGI----VKRMALQPPHFRVDWQEFAALLSERTRL----VILNTPHNPSAT 178
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266
+ + L I I +ISDE+Y FS G S++ + Q+ R
Sbjct: 179 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVL--------AHPQLRERAVA 230
Query: 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL---VSSQTQYLLSALLSDKKFTQ 323
V S K + G++VG Y ++A + L V++ Q L+ +L + +
Sbjct: 231 VSSFGKTYHMTGWKVG--YCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEP--E 286
Query: 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKI 383
+Y++ +Q+ LV+ L ++ + L F VD + S + E W
Sbjct: 287 HYLAL-PDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAV--STLDDVEFCQWLTQ 343
Query: 384 VYDVKLNISPGSSCHCTEP---GWFRVCFANMSEDTLKLSMQRLK 425
+ V + S C +P R+CFA E TL + +RL+
Sbjct: 344 EHGVA---AIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLR 384
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
GLPA ++ L E RG D +I ++ GA + + P + + P YP
Sbjct: 76 GLPALRQKLSE--DFYRG---FVDAKEIFISDGA-KVDLFRLLSFFGPNQTVAIQDPSYP 129
Query: 147 GFDRDLKWRTGV-EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205
+ D+ TG EI+ + C N F + + H+ + + + +P+NP G
Sbjct: 130 AY-LDIARLTGAKEIIALPCLQENAF---------FPEFPEDTHIDI--LCLCSPNNPTG 177
Query: 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV-SIMEILKDRNCENTQVWNRV 264
T +++++L +V+ E I ++ D YS T S P SI EI R C
Sbjct: 178 TVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISDPSLPKSIFEIPDARFCAIE------ 230
Query: 265 HIVYSLSKDLGLPGFRVG 282
+ S SK LG G R+G
Sbjct: 231 --INSFSKPLGFAGIRLG 246
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 57/326 (17%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV-PIQCTSLNGFQ 172
++ + G A L+ L + + ++ P Y F+ +K I+ P+Q NG
Sbjct: 93 LIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLE-NGNY 151
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232
I + Y+ + + VK ++ NP NP+G +++EL L +I + N+ +ISDEI
Sbjct: 152 IMD------YEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEI 205
Query: 233 YSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD--- 289
+S + + + I K+ +NT + +K + G + + D+
Sbjct: 206 HSDIILKKHKHIPMASISKEFE-KNTIT------CMAPTKTFNIAGLQSSYVVLPDEKDY 258
Query: 290 -MVVAAATKM-----SSFGLVSSQTQY---------LLSALLSDKKFTQNYISENKKRLK 334
++ A T++ + F LV+++ Y L L S+ F YI+EN +LK
Sbjct: 259 KLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLK 318
Query: 335 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPG 394
R K WVD L S+ EL +V K+ ++ G
Sbjct: 319 VR----------------KPEGTYLLWVDFSALGLSDE-----ELESILVQKGKVALNQG 357
Query: 395 SSCHCTEPGWFRV---CFANMSEDTL 417
+S G+ R+ C +M E+ L
Sbjct: 358 NSFGIGGSGYQRINLACPRSMLEEAL 383
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 133 EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192
+P A ++ TP + + R L ++G EI +G+Q+T+ +E +
Sbjct: 97 KPRRAMIV-TPGFAEYGRALA-QSGCEIRRWSLREADGWQLTDAILEALTP-------DL 147
Query: 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKD 252
+ + P+NP G R L + + NI+LI DE + + GF+ ++
Sbjct: 148 DCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALK---- 203
Query: 253 RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLL 312
+N +W ++ SL+K +PG R+G + ++DD +A + V++
Sbjct: 204 ---DNPHIW----VLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALAG 256
Query: 313 SALLSDKKFTQ---NYISENKKRLKQ 335
L D + Q +++ E R Q
Sbjct: 257 EVALQDSAWQQATWHWLREEGARFYQ 282
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 32/249 (12%)
Query: 105 NKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164
++ +FD IV G A + + GEA L+ +P YP F R ++ ++V
Sbjct: 83 HQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNR-KLVSNS 141
Query: 165 CTSLNG-FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223
NG FQI +E + + VK L+ NP NP G R L + ++ +
Sbjct: 142 LKEENGLFQIDFEQLEN--DIVEN---DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKH 196
Query: 224 NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG- 282
++ L+SDEI+ VS + D + ++ S +K + G +
Sbjct: 197 HVILVSDEIHQDLTLFGHEHVSFNTVSPDFK-------DFALVLSSATKTFNIAGTKNSY 249
Query: 283 AIYSNDDM--------VVAAATKMSSFGLVSSQTQY---------LLSALLSDKKFTQNY 325
AI N + +V ++SS G ++++T Y L + L + +F Y
Sbjct: 250 AIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEY 309
Query: 326 ISENKKRLK 334
++ RLK
Sbjct: 310 FAQEAPRLK 318
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 103 RGNKVTFDTSKIVLTAGATSANETLMFCLAEPG----EAFLLPTPYYPGFDRDLKWRTGV 158
R V D I LT GA+ T++ L G ++P P YP + + +
Sbjct: 145 RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAI 204
Query: 159 EIVPI----QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
++ C +LN ++ A++EA K H K + + NP NP G SR +
Sbjct: 205 QVNYYLDEENCWALNVNELRR-AVQEA-----KDHCDPKVLCIINPGNPTGQVQSRKCIE 258
Query: 215 LLVNIITEKNIHLISDEIYSGTVFS 239
+++ E+ + L++DE+Y V+S
Sbjct: 259 DVIHFAWEEKLFLLADEVYQDNVYS 283
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 16/283 (5%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G P+ +L++ S I ++ + +T GA + + L G+ ++ P++
Sbjct: 96 GRPSLINSLIKLYSPIYNTEL--KAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFD 153
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE----AYQLAQKRHLKVKGVLVTNPSN 202
+ +++ G ++V + T EE Q + K K V++ P N
Sbjct: 154 QYIPNIEL-CGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHN 212
Query: 203 PLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262
P+G +R EL L NI + N+ +ISDE+Y F+ F I + + ++
Sbjct: 213 PIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATL-------SPEIGQ 264
Query: 263 RVHIVYSLSKDLGLPGFRVGAIYS-NDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKF 321
V S G+R+G + S N +++ AA + S A +
Sbjct: 265 LTLTVGSAGXSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDAL 324
Query: 322 TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDM 364
Y + ++ + + S ++ G+ F VD
Sbjct: 325 KIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDF 367
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254
+ V+ P+NP G ++ EL L + + NI L+ D Y G F PG +
Sbjct: 184 ICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY-GVPF--PGIIF--------- 231
Query: 255 CENTQVWN-RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAA 295
E +WN + + SLSK LGLPG R G I +ND + A A
Sbjct: 232 SEARPLWNPNIILCXSLSK-LGLPGSRCGIIIANDKTITAIA 272
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 127/317 (40%), Gaps = 28/317 (8%)
Query: 63 PDAAGFKRDGQSIFRELALFQDYH---------GLPAFKKALVEFMSEIRGNKVTFDTSK 113
PD F R + + + ++YH G P K+ +++ + G D
Sbjct: 53 PDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERXYGI-TGLDEDN 111
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-FDRDLKWRTGVEIVPIQCTSLNGFQ 172
++ T G+ A + + + +L P Y G + ++ +VP++ +
Sbjct: 112 LIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGXD-LN 170
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232
+ E + E + + + +K V V+N NP G T S + LV I + ++ ++ D+
Sbjct: 171 VLERKLSEFDKNGKIKQVKFIYV-VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDP 229
Query: 233 YSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVV 292
Y + ++ I K E RV ++ + SK L PG R+G + + + +
Sbjct: 230 YGALRYEGE---TVDPIFKIGGPE------RVVLLNTFSKVLA-PGLRIGXVAGSKEFIR 279
Query: 293 AAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-----A 347
S L S + L+A ++ + + +++ ++ LE+
Sbjct: 280 KIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIP 339
Query: 348 GISCLKSNAGLFCWVDM 364
G+ +KS GLF W+ +
Sbjct: 340 GVKWVKSEGGLFIWLTL 356
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 33/213 (15%)
Query: 145 YPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL 204
+PGFD +R + + + L F+I T + + V++ NPSNP
Sbjct: 97 WPGFD---GYRARIAV-----SGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPT 148
Query: 205 GTTMSRNELNLLVNIITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTQVWNR 263
G +S EL+ L ++ L+ DE Y + F + G EN V+
Sbjct: 149 GQALSAGELDQL----RQRAGKLLIDETYVDYSSFRARGLAY---------GENELVFR- 194
Query: 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQ 323
S SK GL G R+GA++ ++ +AA + F V + + L A L + + +
Sbjct: 195 -----SFSKSYGLAGLRLGALFGPSEL-IAAXKRKQWFCNVGTLDLHALEAALDNDRARE 248
Query: 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNA 356
+I+ K L QR R++ L G S A
Sbjct: 249 AHIA---KTLAQR-RRVADALRGLGYRVASSEA 277
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 117 TAGATSANETLMFCLAE-----PGEAFLLPTPYYPGFDR--DLKWRTGVEIVPIQCTSLN 169
T G T+A LAE G+ + P + + R +LK VE V + N
Sbjct: 170 TEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVE-VDLHSYEKN 228
Query: 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN--IHL 227
++I IE+ + +K ++V NP+NP N LN + + EKN + +
Sbjct: 229 DWEIEPNEIEKL------KDPSIKALIVVNPTNPTSKEFDTNALNAIKQAV-EKNPKLXI 281
Query: 228 ISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN 287
ISDE+Y V P F SI + V +VYS S G G+R+G I N
Sbjct: 282 ISDEVYGAFV---PNFKSIYSV----------VPYNTXLVYSYSXLFGCTGWRLGVIALN 328
Query: 288 DDMV 291
+ V
Sbjct: 329 EKNV 332
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT-GVEIVPIQCTSLNGFQ 172
IV +AG A T + + E+ L+ P YP F + + + P+Q + + +
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQN-DTYA 143
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232
I +E+ +Q VK L+ +P NP+G + EL L ++ T+ N+ +++DEI
Sbjct: 144 IDFEHLEKQFQQG------VKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEI 197
Query: 233 YSGTVFSS---PGFVSIMEILKDR 253
+S +++ F S+ E L R
Sbjct: 198 HSDIIYADHTHTPFASLSEELAAR 221
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 134/343 (39%), Gaps = 27/343 (7%)
Query: 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP 146
G + AL +M + + +I+ AG+ A + + PG+ ++ P Y
Sbjct: 84 GFTPLRLALARWME--KRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYL 141
Query: 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT 206
+ K+ E + I G ++ + Q + +K+ V+ NP G
Sbjct: 142 AAIQAFKYYDP-EFISIPLDD-KGMRVDLLEEKLEELRKQGKRVKIV-YTVSTFQNPAGV 198
Query: 207 TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266
TMS + L+ + E + ++ D YS +S I ++ + RV
Sbjct: 199 TMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPI---------KHFDDYGRVIY 249
Query: 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYI 326
+ + SK L PGFR+G + ++ ++ S L ++ ++ + + +I
Sbjct: 250 LGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHI 308
Query: 327 SENKKRLKQRHRKLVSGLEK---AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKI 383
+ + K R ++ LE+ G+ K G+F V + + + E + K +
Sbjct: 309 PKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLM-MERAVAKGV 367
Query: 384 VYDVKLNISPGSS--CHCTEPGWFRVCFANMSEDTLKLSMQRL 424
Y PG + H + R+ F + E+T++ ++RL
Sbjct: 368 AY------VPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRL 404
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 136 EAFLLP-TPYYPGF-DRDLKWRTGVEIVP----IQCTSLNGFQITETAIEEAYQLAQKRH 189
++ LLP TP Y G+ D ++ + ++P + GF E L +
Sbjct: 145 KSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE 204
Query: 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEI 249
++ + + P+NP G ++ E L I +I LI D Y F +I+
Sbjct: 205 GRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGXP------FPNIIYS 258
Query: 250 LKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQ-T 308
N +N + + +SLSK +GLPG R G I ++ ++ A + + L ++
Sbjct: 259 DAHLNWDNNTI-----LCFSLSK-IGLPGXRTGIIVADAKVIEAVSAXNAVVNLAPTRFG 312
Query: 309 QYLLSALLSDKKFTQNYISENK-KRLKQRHRKLVSGLEKAGIS-----CLKSNAGLFCWV 362
+ + L+++ + Q +S+N+ K Q+ L L K + K +F W+
Sbjct: 313 AAIATPLVANDRIKQ--LSDNEIKPFYQKQATLAVKLLKQALGDYPLXIHKPEGAIFLWL 370
Query: 363 DMRHL 367
+ L
Sbjct: 371 WFKDL 375
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 21/133 (15%)
Query: 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNII 220
VPI NG+Q ++ +L + + VK NPSNP M + L+ + I+
Sbjct: 220 VPIHADPDNGWQYSDA------ELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIV 273
Query: 221 TEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG 278
E+ ++ +++D++Y GT F S+ + C + +VYS SK G G
Sbjct: 274 AEQRPDLLILTDDVY-GTFADE--FQSLFSV-----CPRNTL-----LVYSFSKYFGATG 320
Query: 279 FRVGAIYSNDDMV 291
+R+G I ++ D V
Sbjct: 321 WRLGVIAAHKDNV 333
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 91 FKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR 150
+KK + ++M + ++ T I+ TAG A + +PG+ ++ TP Y F
Sbjct: 71 YKKTVKKWMKD--RHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFM 128
Query: 151 DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSR 210
+K E I+C L ++ +L++ ++ K +L +P NP+G +
Sbjct: 129 AIK---NQERKIIECELLEKDGYYTIDFQKLEKLSKDKN--NKALLFCSPHNPVGRVWKK 183
Query: 211 NELNLLVNIITEKNIHLISDEIYSGTVFSSPG-----FVSIMEILKDR 253
+EL + +I+ + ++ L SDEI+ + PG F SI E L D+
Sbjct: 184 DELQKIKDIVLKSDLMLWSDEIHFDLIM--PGYEHTVFQSIDEQLADK 229
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243
L +K +V V++ +P+NP G T+S EL V + + + LI+DE YS ++P
Sbjct: 147 LNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPP- 205
Query: 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL 303
+L+ + + V +++SLSK PG R G I + ++ + G
Sbjct: 206 ---PSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGY 262
Query: 304 VSS 306
S+
Sbjct: 263 TSA 265
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 127/341 (37%), Gaps = 61/341 (17%)
Query: 39 GIIQMGLAENQLSF--DLLESWLDR-NPDAAGFKRDGQSIFRELA-LFQDYHGLPAFKKA 94
G++ + +AE+ S +L++ D +A G++ DG + + A + D +G A +
Sbjct: 24 GVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDGSLLSQATAEFYADRYGYQARPEW 83
Query: 95 LVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW 154
+ +RG + D F A+ ++PTP YP F L
Sbjct: 84 IFPIPDVVRGLYIAID-----------------HFTPAQ--SKVIVPTPAYPPFFHLLS- 123
Query: 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
T G I T + + + + +L+ NP NPLG + LN
Sbjct: 124 ----------ATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLN 173
Query: 215 LLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274
L ++ + ++ DEI++ VF G ++ + D + + + S
Sbjct: 174 ELCDLAHRYDARVLVDEIHAPLVFD--GQHTVAAGVSDTAA------SVCITITAPSXAW 225
Query: 275 GLPGFRVGA-IYSN-------DDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYI 326
+ G + I+SN + S+ GL++++ Y ++ +++
Sbjct: 226 NIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAY---------RYGTDFL 276
Query: 327 SENKKRLKQRHRKLVSGLEK--AGISCLKSNAGLFCWVDMR 365
++ LK H L+ + K G A W+D R
Sbjct: 277 NQEVAYLKNNHDFLLHEIPKRIPGAKITPXQATYLXWIDFR 317
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 69/302 (22%)
Query: 58 WLDRN--PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115
WL+ N P A F+ Q++ R + + KA++E ++ G K +++
Sbjct: 33 WLNANEYPTAVEFQLTQQTLNR----YPECQ-----PKAVIENYAQYAGVK----PEQVL 79
Query: 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC---TSLNGFQ 172
++ GA E L+ EPG+ +L P G + E + ++C +L+ +Q
Sbjct: 80 VSRGADEGIELLIRAFCEPGKDAILYCPPTYGM-----YSVSAETIGVECRTVPTLDNWQ 134
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232
+ I + VK V V +P+NP G ++ + L+ + K I +++DE
Sbjct: 135 LDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEA 186
Query: 233 YSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-- 290
Y + P S+ L + + + I+ +LSK L G R G +N+++
Sbjct: 187 Y---IEFCPQ-ASLAGWLAE--------YPHLAILRTLSKAFALAGLRCGFTLANEEVIN 234
Query: 291 ----VVA-----------AATKMSSFGLVS---------SQTQYLLSALLSDKKFTQNYI 326
V+A AA +S G+V+ ++ +YL++AL Q +
Sbjct: 235 LLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD 294
Query: 327 SE 328
SE
Sbjct: 295 SE 296
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 43/239 (17%)
Query: 58 WLDRN--PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115
WL+ N P A F+ Q++ R + + KA++E ++ G K +++
Sbjct: 33 WLNANEYPTAVEFQLTQQTLNR----YPECQ-----PKAVIENYAQYAGVK----PEQVL 79
Query: 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC---TSLNGFQ 172
++ GA E L+ EPG+ +L P G + E + ++C +L+ +Q
Sbjct: 80 VSRGADEGIELLIRAFCEPGKDAILYCPPTYG-----XYSVSAETIGVECRTVPTLDNWQ 134
Query: 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232
+ I + VK V V +P+NP G ++ + L+ + K I +++DE
Sbjct: 135 LDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEA 186
Query: 233 YSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV 291
Y + P S+ L + + + I+ +LSK L G R G +N++++
Sbjct: 187 Y---IEFCPQ-ASLAGWLAE--------YPHLAILRTLSKAFALAGLRCGFTLANEEVI 233
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQI 173
IVL GA+ E + E L+ P Y ++ + K + GV +V F
Sbjct: 81 IVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAK-KHGVSVV---------FSY 126
Query: 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233
+ + Y+ + V V++ NP+NP G +++ + ++ + EK +I DE +
Sbjct: 127 LDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAF 186
Query: 234 SGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG-AIYSNDDMVV 292
F+ S + +K+ +C + I+ +++K +PG R G I +N ++
Sbjct: 187 --IEFTGDPSSSFVGEIKNYSC--------LFIIRAMTKFFAMPGIRFGYGITNNKEIAA 236
Query: 293 AAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348
K + + + ++ L NYI E+ +K+ ++ + L K G
Sbjct: 237 KIKAKQNPWNINCFAEMAAINCLKD-----TNYIEESLLWIKKERKRFIEELNKIG 287
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 21/288 (7%)
Query: 85 YHGLPA-FKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTP 143
Y +PA + KA+ ++ EI ++ V +G A + PG+ L+ P
Sbjct: 60 YESVPAEYYKAVADW-EEIE-HRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEP 117
Query: 144 YYPGFDRDLKWRTGVEIVPIQCTSLNG-FQITETAIEEAYQLAQKRHLKVKGVLVTNPSN 202
Y F ++ G ++ N + + +EE +LA V+ + NP N
Sbjct: 118 VYNXFYSVIE-GNGRRVISSDLIYENSKYSVNWADLEE--KLATP---SVRXXVFCNPHN 171
Query: 203 PLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262
P+G S E+ + + + + LISDEI+ V + + D N
Sbjct: 172 PIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAK-------N 224
Query: 263 RVHIVYSLSKDLGLPGFRVG-AIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKF 321
V + S S L AI N D+ A G + + A ++ +
Sbjct: 225 WVVSLISPSXTFNLAALHAACAIIPNPDLRARAEESFFLAG-IGEPNLLAIPAAIAAYEE 283
Query: 322 TQNYISENKKRLKQR--HRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367
+++ E K+ L+ + + E + L SNA WVD+ L
Sbjct: 284 GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISAL 331
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSS 240
+L + + +K NPSNP M + L + NI+ E ++ +++D++Y GT +
Sbjct: 237 ELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY-GTF--A 293
Query: 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV 291
F S+ I ENT +VYS SK G G+R+G + ++ V
Sbjct: 294 DDFQSLFAICP----ENTL------LVYSFSKYFGATGWRLGVVAAHQQNV 334
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSS 240
+L + + +K NPSNP M + L + NI+ E ++ +++D++Y GT +
Sbjct: 237 ELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY-GTF--A 293
Query: 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN 287
F S+ I ENT +VYS SK G G+R+G + ++
Sbjct: 294 DDFQSLFAICP----ENTL------LVYSFSKYFGATGWRLGVVAAH 330
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 256
+ NP+NP G + R E+ L+N + + D+ Y F++ + +I +N
Sbjct: 135 LCNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVS--FTTEEVIRPADIKGRKN-- 188
Query: 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM---VVAAATKMSSFGLVSSQTQYLL 312
+ VYS S G+PG R+G I +N D V A +T + L +++L
Sbjct: 189 -------LVXVYSFSHAYGIPGLRIGYIVANKDFXKRVAAFSTPWAVNALAIEAAKFIL 240
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSS 240
+L + + +K NPSNP M L + I+ E ++ +++D++Y GT +
Sbjct: 237 ELDKLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY-GTF--A 293
Query: 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV 291
GF S+ I C + +VYS SK G G+R+G + ++ + +
Sbjct: 294 DGFQSLFAI-----CPANTL-----LVYSFSKYFGATGWRLGVVAAHKENI 334
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 119 GATSANETLMFCLAEPGEAFLLPTPYYP---GFDRDLKWRTGVEIVPIQCTSLNGFQ-IT 174
G+ L+ L EP + LLP YP G R RT ++P++ L + +
Sbjct: 95 GSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTF--LIPLREDGLADLKAVP 152
Query: 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234
E EA K +L+ P+NP G + + + + LI D Y
Sbjct: 153 EGVWREA-----------KVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYV 201
Query: 235 GTVFS--SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG-AIYSNDDMV 291
V+ +P +++ RV ++SLSK L GFR+G A+ S + +
Sbjct: 202 DQVYEGEAPSPLAL-----------PGAKERVVELFSLSKSYNLAGFRLGFALGSEEALA 250
Query: 292 VAAATK-MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS 350
K + F + + + AL + K+ + Y + ++R + L K +S
Sbjct: 251 RLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGY----ARVYRERALGMAEAL-KGVLS 305
Query: 351 CLKSNAGLFCW 361
L A ++ W
Sbjct: 306 LLPPRATMYLW 316
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 108 TFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167
D+ +V L+ +E GE ++ TP Y F + ++ ++P+
Sbjct: 84 AIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIE-GNQRTVMPVALEK 142
Query: 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227
+ EA LA+ + K +L+ +P NP G + +EL ++ ++ + +
Sbjct: 143 QADGWFCDMGKLEAV-LAKP---ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRV 198
Query: 228 ISDEIYSGTVF 238
ISDEI+ V+
Sbjct: 199 ISDEIHMDMVW 209
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQI 173
I+ G A + +E G+A L+ +P Y F R ++ N QI
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND-------HRLVENSLQI 174
Query: 174 TETAIEEAYQLAQKRHL--KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231
E ++ +K + VK L+ +P NP G ++L + + + + L+SDE
Sbjct: 175 INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 232 IY 233
I+
Sbjct: 235 IH 236
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 102/285 (35%), Gaps = 38/285 (13%)
Query: 73 QSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA 132
++I EL D L + A + + E+ G FD S I+ G+ L+ A
Sbjct: 46 KAILEELG--PDGAALRIYPSASSQKLREVAGELYGFDPSWIIXANGSDEVLNNLIRAFA 103
Query: 133 EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ-KRHLK 191
GE P Y + + +Q + F +T +++A +
Sbjct: 104 AEGEEIGYVHPSYSYYG---------TLAEVQGARVRTFGLTGD-----FRIAGFPERYE 149
Query: 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251
K +T P+ PLG + ++ L L+ DE Y+ E +
Sbjct: 150 GKVFFLTTPNAPLGPSFPLEYIDELARRCAGX---LVLDETYA-------------EFAE 193
Query: 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYL 311
E + V + +LSK L G R+G + + V+AA K+ + Q
Sbjct: 194 SNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPE-VIAALDKIRDHYNLDRLAQAA 252
Query: 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA 356
A L D Q Y+SE +R+++ + L G + S
Sbjct: 253 CVAALRD----QAYLSECCRRIRETREWFTTELRSIGYDVIPSQG 293
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 17/137 (12%)
Query: 159 EIVPIQCTSLNGFQITE----TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
E VP+Q ++ + T +EEA++ + L +NP+NP G S E+
Sbjct: 149 EXVPVQLDYVSADETRAGLDLTGLEEAFKAGARV------FLFSNPNNPAGVVYSAEEIG 202
Query: 215 LLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274
+ + +I+D++YS ++ + + E V + S
Sbjct: 203 QIAALAARYGATVIADQLYSRLRYAGASYTHL-------RAEAAVDAENVVTIXGPSXTE 255
Query: 275 GLPGFRVGAIYSNDDMV 291
L G+R+G + + ++
Sbjct: 256 SLSGYRLGVAFGSRAII 272
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 43/264 (16%)
Query: 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF-SSPGFVSIMEILKDR 253
+ +P+NP G SR +L+ LV+ +I D Y+ + SP SI EI R
Sbjct: 216 IFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSP--RSIYEIPGAR 273
Query: 254 NCENTQVWNRVHIVYSLSKDLGLPGFRVG-------AIYSNDDMVVAAATKM--SSFGLV 304
V S SK G G R+G +YSN ++ ++ +SF
Sbjct: 274 EVAIE--------VSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGA 325
Query: 305 SSQTQY-----LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF 359
S+ Q L S L + + NY EN+K L+ L G+ +
Sbjct: 326 SNIAQAGGLACLSSGGLKEIRSVNNYYKENRK-------ILMDTLVSLGLKVYGGVNAPY 378
Query: 360 CWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 419
WV H S ++ +++ +I+ + + PGS + R+ + ++
Sbjct: 379 LWV---HFKGSKSW----DVFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVEA 431
Query: 420 SMQRLKAFVDSIT---TTLHNQSN 440
S +RL+ F ++ T T L + SN
Sbjct: 432 S-KRLQNFFNTRTKHFTYLSSTSN 454
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/324 (16%), Positives = 127/324 (39%), Gaps = 30/324 (9%)
Query: 107 VTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166
+ ++++T G+ A + + + G LL P Y G + + + P T
Sbjct: 87 IGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQG-----PRFLT 141
Query: 167 SLNGFQITET-AIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225
G + + A+EE + + R L L+ + NP G L+ ++ E+ +
Sbjct: 142 VPAGEEGPDLDALEEVLKRERPRFL----YLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 226 HLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIY 285
++ D+ Y F S+ E+ ++ + V + S SK L PG RV
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFELAREAG------YPGVIYLGSFSKVLS-PGLRVAFAV 250
Query: 286 SNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345
++ + + L + +L L + F++ + ++ +++ + ++ L+
Sbjct: 251 AHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSER-LERVRRVYREKAQAMLHALD 309
Query: 346 K---AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402
+ + + G+F W+++ L + L+++ + + + PG
Sbjct: 310 REVPKEVRYTRPKGGMFVWMELPKGLSAEG------LFRRALEE-NVAFVPGGPFFANGG 362
Query: 403 G--WFRVCFANMSEDTLKLSMQRL 424
G R+ +A + + + ++RL
Sbjct: 363 GENTLRLSYATLDREGIAEGVRRL 386
>pdb|3KGX|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGX|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.80 A Resolution
pdb|3KGW|A Chain A, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
pdb|3KGW|B Chain B, Crystal Structure Of Putative Aminotransferase
(Aah25799.1) From Mus Musculus At 1.65 A Resolution
Length = 393
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 91 FKKALVEFMSEIR-GNKVTFDTSK---IVLTAGATSANETLMFCLAEPGEAFL 139
+K +++ M EI+ G + F T +V++ A ET +F L EPG++FL
Sbjct: 50 MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFL 102
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 29/173 (16%)
Query: 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254
V + NP+NP G R E+ I + + DE Y F +V +
Sbjct: 142 VFIPNPNNPTGHVFEREEIER----ILKTGAFVALDEAYYE--FHGESYVDFL------- 188
Query: 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSA 314
+ + + ++ + SK L RVG + +++ + A F VS +Q
Sbjct: 189 ----KKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN-VSYVSQMFAKV 243
Query: 315 LLSDKKFTQ---NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDM 364
L ++ + +I E ++R+K S L + G S G F +V M
Sbjct: 244 ALDHREIFEERTKFIVEERERMK-------SALREMGYRITDSR-GNFVFVFM 288
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 23/217 (10%)
Query: 136 EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195
+ LLP + + R G + +G T++ +E A + + K K +
Sbjct: 138 DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVE-----ALQSYNKDKVI 192
Query: 196 LVTN-PSNPLGTTMSRNELNLLVNII---TEKNIHLIS--DEIYSGTVFSSPGFVSIMEI 249
++ N P+NP G T + E+ +V I K +I+ D+ Y G + S+
Sbjct: 193 MILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTA 252
Query: 250 LKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAI-YSNDDMVVAAATKMSSFGLVSSQ- 307
L + + N + R+ +K+ GFRVG + + D + GL+ S
Sbjct: 253 LTNLHS-NAILPIRLD---GATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNI 308
Query: 308 ------TQYLLSALLSDKKFTQNYISENKKRLKQRHR 338
TQ + +L + K I +N + LK+R+
Sbjct: 309 SSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYE 345
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 29/173 (16%)
Query: 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254
V + NP+NP G R E+ I + + DE Y F +V +
Sbjct: 154 VFIPNPNNPTGHVFEREEIER----ILKTGAFVALDEAYYE--FHGESYVDFL------- 200
Query: 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSA 314
+ + + ++ + SK L RVG + +++ + A F VS +Q
Sbjct: 201 ----KKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN-VSYVSQMFAKV 255
Query: 315 LLSDKKFTQ---NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDM 364
L ++ + +I E ++R+K S L + G S G F +V M
Sbjct: 256 ALDHREIFEERTKFIVEERERMK-------SALREMGYRITDSR-GNFVFVFM 300
>pdb|3QF4|B Chain B, Crystal Structure Of A Heterodimeric Abc Transporter In
Its Inward- Facing Conformation
Length = 598
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 FLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDR-NPDAAGFK 69
F+G+ P +E+ N +IQM LA + F++L+ ++ +PDA +
Sbjct: 299 FIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAVELR 349
>pdb|1A2Z|A Chain A, Pyrrolidone Carboxyl Peptidase From Thermococcus Litoralis
pdb|1A2Z|B Chain B, Pyrrolidone Carboxyl Peptidase From Thermococcus Litoralis
pdb|1A2Z|C Chain C, Pyrrolidone Carboxyl Peptidase From Thermococcus Litoralis
pdb|1A2Z|D Chain D, Pyrrolidone Carboxyl Peptidase From Thermococcus Litoralis
Length = 220
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214
R V I+ + +G+Q + IEE LA L V+ + T N + T+S +
Sbjct: 81 RIAVNIIDARIPDNDGYQPIDEKIEEDAPLAYMATLPVRAITKTLRDNGIPATISYSAGT 140
Query: 215 LLVNIITEKNIHLISDEIYS 234
L N + K +H E Y
Sbjct: 141 YLCNYVMFKTLHFSKIEGYP 160
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 202 NPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSSPGFVSIM 247
N +GT ++NE+ ++ NI+ +K NI L D Y+ + + G VS++
Sbjct: 388 NCVGTAFAKNEIEIVANIVLDKMRNIRLEEDFCYAESGLYTRGPVSLL 435
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237
++E +L + ++K + + P+NPLG + +E + + E + +I D Y+
Sbjct: 140 LDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVI-DAAYN--- 195
Query: 238 FSSPGFVSIMEILKD-RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA 293
F S + K CE + ++ V + + S GL G R+G +N +++ A
Sbjct: 196 ----EFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIANANIISA 248
>pdb|2V0H|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0I|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0J|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-acetylglucosamine-1-
Phosphate Uridyltransferase (glmu)
pdb|2V0K|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0L|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2VD4|A Chain A, Structure Of Small-Molecule Inhibitor Of Glmu From
Haemophilus Influenzae Reveals An Allosteric Binding
Site
pdb|2W0V|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 1
pdb|2W0W|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 2
Length = 456
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 159 EIVPIQCTSL-------NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPS--NPLGTTMS 209
++V +Q T + N Q+ A+E +Q Q L ++GV++ +P+ + GT
Sbjct: 211 QVVAVQATDVMEVEGANNRLQLA--ALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEH 268
Query: 210 RNELNLLVNIITEKNIHLISDEIYSGT 236
++ + VN+I E N+ L D + GT
Sbjct: 269 GKDVEIDVNVIIEGNVKL-GDRVKIGT 294
>pdb|1FWY|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FWY|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FXJ|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
pdb|1FXJ|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
Length = 331
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 152 LKWRTGVEIVPIQCTSL-------NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPS--N 202
L ++ G EIV + L N Q++ +E YQ Q L + GV++ +P+ +
Sbjct: 204 LAYQEGREIVAVHPQRLSEVEGVNNRLQLSR--LERVYQSEQAEKLLLAGVMLRDPARFD 261
Query: 203 PLGTTMSRNELNLLVNIITEKNIHL 227
GT ++ + N+I E N+ L
Sbjct: 262 LRGTLTHGRDVEIDTNVIIEGNVTL 286
>pdb|1HV9|A Chain A, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|1HV9|B Chain B, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|2OI5|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI5|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI6|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI6|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI7|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
pdb|2OI7|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
Length = 456
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 152 LKWRTGVEIVPIQCTSL-------NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPS--N 202
L ++ G EIV + L N Q++ +E YQ Q L + GV++ +P+ +
Sbjct: 204 LAYQEGREIVAVHPQRLSEVEGVNNRLQLSR--LERVYQSEQAEKLLLAGVMLRDPARFD 261
Query: 203 PLGTTMSRNELNLLVNIITEKNIHL 227
GT ++ + N+I E N+ L
Sbjct: 262 LRGTLTHGRDVEIDTNVIIEGNVTL 286
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF----SSPG 242
++ +NP+NP + EL ++ + T+ ++ +I D Y G F S PG
Sbjct: 186 IIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAYFGXDFRKDYSHPG 237
>pdb|1WW4|A Chain A, Agrocybe Cylindracea Galectin Complexed With Neuaca2-
3lactose
pdb|1WW4|B Chain B, Agrocybe Cylindracea Galectin Complexed With Neuaca2-
3lactose
pdb|1WW4|C Chain C, Agrocybe Cylindracea Galectin Complexed With Neuaca2-
3lactose
pdb|1WW4|D Chain D, Agrocybe Cylindracea Galectin Complexed With Neuaca2-
3lactose
pdb|1WW5|A Chain A, Agrocybe Cylindracea Galectin Complexed With 3'-Sulfonyl
Lactose
pdb|1WW5|B Chain B, Agrocybe Cylindracea Galectin Complexed With 3'-Sulfonyl
Lactose
pdb|1WW5|C Chain C, Agrocybe Cylindracea Galectin Complexed With 3'-Sulfonyl
Lactose
pdb|1WW5|D Chain D, Agrocybe Cylindracea Galectin Complexed With 3'-Sulfonyl
Lactose
pdb|1WW6|A Chain A, Agrocybe Cylindracea Galectin Complexed With Lactose
pdb|1WW6|B Chain B, Agrocybe Cylindracea Galectin Complexed With Lactose
pdb|1WW6|C Chain C, Agrocybe Cylindracea Galectin Complexed With Lactose
pdb|1WW6|D Chain D, Agrocybe Cylindracea Galectin Complexed With Lactose
pdb|1WW7|A Chain A, Agrocybe Cylindracea Galectin (Ligand-Free)
pdb|1WW7|B Chain B, Agrocybe Cylindracea Galectin (Ligand-Free)
pdb|1WW7|C Chain C, Agrocybe Cylindracea Galectin (Ligand-Free)
pdb|1WW7|D Chain D, Agrocybe Cylindracea Galectin (Ligand-Free)
Length = 160
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 104 GNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLL 140
G+ VTF +S + L+AGA S N T + L+E G A+LL
Sbjct: 25 GDIVTFFSSALNLSAGAGSPNNTALNLLSENG-AYLL 60
>pdb|1XT8|A Chain A, Crystal Structure Of Cysteine-Binding Protein From
Campylobacter Jejuni At 2.0 A Resolution
pdb|1XT8|B Chain B, Crystal Structure Of Cysteine-Binding Protein From
Campylobacter Jejuni At 2.0 A Resolution
Length = 292
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 290 MVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349
+ V + ++S + +T L +D FTQNY + + Q + ++K G
Sbjct: 137 VAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQNYPNIKTLKYDQNTETFAALMDKRGD 196
Query: 350 SCLKSNAGLFCWV 362
+ N LF WV
Sbjct: 197 ALSHDNTLLFAWV 209
>pdb|1Z3H|A Chain A, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
pdb|1Z3H|B Chain B, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State
Length = 968
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230
Q +E +I+ + + +++ ++ NPSNP T + + ++N +N+ L+ D
Sbjct: 581 LQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVD 640
Query: 231 EIYSG--TVFS 239
+ TVFS
Sbjct: 641 SMMPTFLTVFS 651
>pdb|1WA5|C Chain C, Crystal Structure Of The Exportin Cse1p Complexed With Its
Cargo (Kap60p) And Rangtp
Length = 960
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230
Q +E +I+ + + +++ ++ NPSNP T + + ++N +N+ L+ D
Sbjct: 581 LQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVD 640
Query: 231 EIYSG--TVFS 239
+ TVFS
Sbjct: 641 SMMPTFLTVFS 651
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,750,443
Number of Sequences: 62578
Number of extensions: 551259
Number of successful extensions: 1568
Number of sequences better than 100.0: 95
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1428
Number of HSP's gapped (non-prelim): 104
length of query: 469
length of database: 14,973,337
effective HSP length: 102
effective length of query: 367
effective length of database: 8,590,381
effective search space: 3152669827
effective search space used: 3152669827
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)