Query 043923
Match_columns 469
No_of_seqs 224 out of 2656
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:32:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02450 1-aminocyclopropane-1 100.0 4.7E-70 1E-74 559.1 48.8 467 1-467 1-467 (468)
2 KOG0256 1-aminocyclopropane-1- 100.0 1.3E-70 2.9E-75 515.4 38.8 425 1-429 36-460 (471)
3 PLN02376 1-aminocyclopropane-1 100.0 5E-69 1.1E-73 553.2 47.6 432 1-433 9-441 (496)
4 PLN02607 1-aminocyclopropane-1 100.0 8.3E-67 1.8E-71 531.2 45.8 437 1-439 10-446 (447)
5 COG0436 Aspartate/tyrosine/aro 100.0 2.5E-58 5.5E-63 460.1 40.3 357 38-431 28-392 (393)
6 PRK07366 succinyldiaminopimela 100.0 9.5E-53 2.1E-57 424.3 38.0 354 37-428 29-388 (388)
7 PRK07681 aspartate aminotransf 100.0 8E-52 1.7E-56 418.8 39.6 350 37-426 31-384 (399)
8 PRK09148 aminotransferase; Val 100.0 9.4E-52 2E-56 418.5 39.8 366 37-438 29-398 (405)
9 PRK08636 aspartate aminotransf 100.0 2.7E-51 5.9E-56 415.3 41.6 366 36-432 31-402 (403)
10 PLN02187 rooty/superroot1 100.0 3.1E-51 6.7E-56 419.4 40.9 370 37-443 65-449 (462)
11 PRK06207 aspartate aminotransf 100.0 3.3E-51 7.2E-56 414.3 39.2 358 37-432 38-404 (405)
12 PLN00175 aminotransferase fami 100.0 4.9E-51 1.1E-55 413.7 38.8 353 38-430 54-413 (413)
13 PRK06855 aminotransferase; Val 100.0 5.9E-51 1.3E-55 415.6 39.5 365 37-430 31-429 (433)
14 PTZ00377 alanine aminotransfer 100.0 8.7E-51 1.9E-55 419.7 40.9 348 79-434 108-479 (481)
15 PRK08068 transaminase; Reviewe 100.0 4.9E-51 1.1E-55 411.8 38.0 353 36-427 30-386 (389)
16 PRK13355 bifunctional HTH-doma 100.0 1E-50 2.2E-55 422.5 40.7 360 38-432 146-516 (517)
17 PRK09147 succinyldiaminopimela 100.0 1E-50 2.2E-55 410.4 39.5 353 37-429 28-395 (396)
18 PRK06290 aspartate aminotransf 100.0 1.6E-50 3.4E-55 409.0 38.8 363 31-432 37-407 (410)
19 KOG0257 Kynurenine aminotransf 100.0 6.1E-52 1.3E-56 393.5 26.3 382 10-426 9-415 (420)
20 TIGR03540 DapC_direct LL-diami 100.0 1.7E-50 3.6E-55 407.3 38.1 350 38-426 29-382 (383)
21 PLN00143 tyrosine/nicotianamin 100.0 3.8E-50 8.3E-55 407.1 40.6 363 36-433 30-407 (409)
22 PTZ00433 tyrosine aminotransfe 100.0 3.4E-50 7.4E-55 408.2 40.2 365 36-433 31-411 (412)
23 PRK09276 LL-diaminopimelate am 100.0 2.1E-50 4.5E-55 406.9 37.9 350 38-426 31-384 (385)
24 PRK06348 aspartate aminotransf 100.0 2.9E-50 6.2E-55 405.4 38.5 349 38-427 29-382 (384)
25 PLN00145 tyrosine/nicotianamin 100.0 4.4E-50 9.5E-55 408.2 40.2 362 37-433 51-427 (430)
26 PLN02656 tyrosine transaminase 100.0 4.8E-50 1E-54 406.6 40.3 368 31-433 24-406 (409)
27 PRK07682 hypothetical protein; 100.0 1.8E-50 4E-55 406.3 36.0 354 38-431 20-377 (378)
28 TIGR03538 DapC_gpp succinyldia 100.0 6.4E-50 1.4E-54 404.2 39.5 354 37-428 27-393 (393)
29 PLN02231 alanine transaminase 100.0 1.6E-49 3.6E-54 410.8 42.0 381 38-434 129-531 (534)
30 PRK05942 aspartate aminotransf 100.0 1E-49 2.2E-54 402.7 38.3 350 38-427 35-389 (394)
31 PRK07590 L,L-diaminopimelate a 100.0 5.8E-50 1.3E-54 406.3 35.6 352 37-428 33-409 (409)
32 PRK08361 aspartate aminotransf 100.0 1E-49 2.2E-54 402.5 36.9 354 38-430 33-390 (391)
33 PRK07309 aromatic amino acid a 100.0 7.1E-49 1.5E-53 396.0 41.3 358 38-432 30-390 (391)
34 PRK12414 putative aminotransfe 100.0 2.8E-49 6.1E-54 398.0 37.3 349 38-426 29-383 (384)
35 PRK06107 aspartate aminotransf 100.0 4.2E-49 9E-54 399.2 38.7 360 37-431 32-401 (402)
36 PRK06108 aspartate aminotransf 100.0 5.8E-49 1.3E-53 396.2 38.6 352 38-429 24-381 (382)
37 PRK08960 hypothetical protein; 100.0 7.9E-49 1.7E-53 395.5 38.3 350 38-429 32-386 (387)
38 TIGR01264 tyr_amTase_E tyrosin 100.0 1E-48 2.2E-53 396.5 39.0 358 38-431 31-400 (401)
39 TIGR03537 DapC succinyldiamino 100.0 1.1E-48 2.3E-53 389.2 38.2 341 40-426 2-349 (350)
40 PRK08912 hypothetical protein; 100.0 1.1E-48 2.5E-53 394.5 38.6 355 38-430 26-386 (387)
41 PRK07683 aminotransferase A; V 100.0 1.4E-48 3E-53 393.4 39.0 355 38-433 28-386 (387)
42 COG1168 MalY Bifunctional PLP- 100.0 1.5E-48 3.3E-53 366.8 36.0 358 37-432 24-388 (388)
43 PRK05839 hypothetical protein; 100.0 1.4E-48 3E-53 391.5 37.6 342 39-429 25-373 (374)
44 PRK05957 aspartate aminotransf 100.0 3.3E-48 7.2E-53 390.9 39.6 355 39-433 28-388 (389)
45 COG0079 HisC Histidinol-phosph 100.0 1.3E-48 2.9E-53 383.5 34.4 330 39-430 23-354 (356)
46 PRK09082 methionine aminotrans 100.0 1.9E-48 4.1E-53 392.5 35.4 350 38-426 30-385 (386)
47 PRK07337 aminotransferase; Val 100.0 4.5E-48 9.7E-53 390.2 38.2 354 37-428 29-387 (388)
48 PRK09265 aminotransferase AlaT 100.0 1E-47 2.2E-52 389.4 40.4 361 37-432 32-403 (404)
49 PRK15481 transcriptional regul 100.0 2.5E-48 5.3E-53 397.1 36.2 340 38-429 85-430 (431)
50 TIGR01265 tyr_nico_aTase tyros 100.0 1.9E-47 4.2E-52 387.1 39.6 360 37-431 30-402 (403)
51 PRK08175 aminotransferase; Val 100.0 2.4E-47 5.2E-52 385.6 39.5 358 37-430 28-389 (395)
52 PRK07324 transaminase; Validat 100.0 8.4E-48 1.8E-52 385.5 35.6 344 36-431 24-371 (373)
53 PRK07568 aspartate aminotransf 100.0 3.1E-47 6.7E-52 385.5 40.1 353 38-432 30-394 (397)
54 PRK08363 alanine aminotransfer 100.0 1.9E-47 4.1E-52 386.9 38.3 355 37-431 29-395 (398)
55 TIGR03542 DAPAT_plant LL-diami 100.0 7.5E-48 1.6E-52 390.0 34.7 350 37-428 32-402 (402)
56 PRK05764 aspartate aminotransf 100.0 3.5E-47 7.7E-52 384.6 39.2 358 38-431 31-392 (393)
57 PRK07550 hypothetical protein; 100.0 3.4E-47 7.3E-52 383.6 38.9 353 37-427 28-384 (386)
58 COG1167 ARO8 Transcriptional r 100.0 4.7E-47 1E-51 387.2 39.0 358 38-433 89-458 (459)
59 PRK01533 histidinol-phosphate 100.0 6.6E-48 1.4E-52 384.7 31.4 333 38-437 29-362 (366)
60 PF00155 Aminotran_1_2: Aminot 100.0 7.7E-48 1.7E-52 385.4 31.6 358 39-424 2-363 (363)
61 PRK09275 aspartate aminotransf 100.0 8.4E-48 1.8E-52 392.7 32.2 356 39-433 101-520 (527)
62 PRK07777 aminotransferase; Val 100.0 6.6E-47 1.4E-51 381.6 38.2 354 38-429 24-385 (387)
63 PRK06358 threonine-phosphate d 100.0 2.6E-47 5.7E-52 379.4 34.6 332 39-428 20-353 (354)
64 PRK07392 threonine-phosphate d 100.0 2E-46 4.4E-51 374.3 36.0 335 35-429 19-358 (360)
65 PLN02672 methionine S-methyltr 100.0 3E-46 6.6E-51 402.3 38.9 368 32-429 691-1079(1082)
66 KOG0259 Tyrosine aminotransfer 100.0 4.2E-46 9.1E-51 347.3 33.9 360 39-433 62-436 (447)
67 PRK06425 histidinol-phosphate 100.0 1.8E-46 4E-51 370.3 33.3 315 39-428 17-331 (332)
68 PRK08056 threonine-phosphate d 100.0 1.8E-46 3.9E-51 374.0 33.4 334 37-429 19-354 (356)
69 PRK09257 aromatic amino acid a 100.0 2.4E-46 5.2E-51 378.4 34.1 345 38-428 26-396 (396)
70 PRK14809 histidinol-phosphate 100.0 5E-46 1.1E-50 371.2 34.2 328 36-429 28-356 (357)
71 PTZ00376 aspartate aminotransf 100.0 4.2E-46 9.1E-51 377.3 34.2 346 38-429 29-402 (404)
72 PRK07865 N-succinyldiaminopime 100.0 1.3E-45 2.9E-50 369.1 36.1 335 34-425 23-363 (364)
73 PRK05166 histidinol-phosphate 100.0 6.7E-46 1.5E-50 371.9 33.5 335 37-429 35-370 (371)
74 PRK02610 histidinol-phosphate 100.0 1.6E-45 3.5E-50 369.5 35.7 341 39-431 29-372 (374)
75 TIGR03801 asp_4_decarbox aspar 100.0 1.2E-45 2.6E-50 376.5 32.8 353 39-433 95-519 (521)
76 TIGR03539 DapC_actino succinyl 100.0 2E-45 4.4E-50 366.6 33.8 344 25-424 8-356 (357)
77 PRK03158 histidinol-phosphate 100.0 9.7E-46 2.1E-50 369.5 31.4 328 39-427 30-358 (359)
78 PLN03026 histidinol-phosphate 100.0 4.5E-45 9.8E-50 366.5 35.8 328 37-427 51-379 (380)
79 PLN02368 alanine transaminase 100.0 1.9E-45 4.2E-50 369.8 32.9 283 79-365 100-396 (407)
80 PRK04781 histidinol-phosphate 100.0 1.7E-44 3.7E-49 360.4 36.2 327 39-428 32-361 (364)
81 PRK06836 aspartate aminotransf 100.0 4.7E-44 1E-48 361.3 39.7 346 38-432 33-393 (394)
82 PRK01688 histidinol-phosphate 100.0 2.8E-45 6E-50 364.5 29.9 321 39-425 29-351 (351)
83 PRK09440 avtA valine--pyruvate 100.0 1.3E-44 2.9E-49 368.3 35.2 357 38-433 30-414 (416)
84 PRK08637 hypothetical protein; 100.0 5E-44 1.1E-48 360.4 38.6 328 78-431 36-387 (388)
85 PRK09105 putative aminotransfe 100.0 2E-44 4.4E-49 360.3 33.7 326 38-429 43-369 (370)
86 PRK07908 hypothetical protein; 100.0 5.1E-44 1.1E-48 355.6 35.5 325 37-429 21-346 (349)
87 PRK03317 histidinol-phosphate 100.0 2.9E-44 6.3E-49 359.9 33.9 338 39-431 27-365 (368)
88 PRK08153 histidinol-phosphate 100.0 3.7E-44 8.1E-49 358.8 34.1 334 39-433 33-368 (369)
89 PRK04870 histidinol-phosphate 100.0 3.5E-44 7.5E-49 357.8 32.4 329 37-428 25-356 (356)
90 PLN02397 aspartate transaminas 100.0 1.8E-43 4E-48 359.2 35.6 315 79-429 84-420 (423)
91 PRK06225 aspartate aminotransf 100.0 3.1E-43 6.7E-48 354.0 36.8 347 37-433 27-379 (380)
92 PRK02731 histidinol-phosphate 100.0 2E-43 4.4E-48 353.9 33.5 334 37-429 31-365 (367)
93 PRK05387 histidinol-phosphate 100.0 1.6E-43 3.4E-48 352.9 32.4 325 38-429 24-352 (353)
94 PRK06959 putative threonine-ph 100.0 1.3E-43 2.8E-48 350.3 30.7 315 37-435 23-338 (339)
95 PRK04635 histidinol-phosphate 100.0 2.4E-43 5.2E-48 351.2 31.0 319 38-426 31-351 (354)
96 PRK08354 putative aminotransfe 100.0 3.7E-42 8E-47 336.5 34.9 309 32-428 2-310 (311)
97 PRK14808 histidinol-phosphate 100.0 6.2E-42 1.3E-46 338.0 33.7 317 36-427 17-334 (335)
98 PRK05664 threonine-phosphate d 100.0 3.3E-42 7.2E-47 339.5 31.6 310 37-430 19-328 (330)
99 PRK03321 putative aminotransfe 100.0 2.5E-42 5.3E-47 344.1 31.0 335 31-429 15-350 (352)
100 PRK14807 histidinol-phosphate 100.0 7E-42 1.5E-46 340.3 34.1 326 39-428 23-350 (351)
101 PRK00950 histidinol-phosphate 100.0 6.7E-42 1.5E-46 342.2 32.3 327 37-429 33-361 (361)
102 PRK03967 histidinol-phosphate 100.0 1.4E-41 3E-46 336.0 31.9 316 39-431 19-335 (337)
103 TIGR01141 hisC histidinol-phos 100.0 2.8E-41 6.1E-46 335.7 31.4 326 37-424 18-345 (346)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 6.9E-41 1.5E-45 330.3 31.2 313 37-424 16-329 (330)
105 KOG0634 Aromatic amino acid am 100.0 2.9E-38 6.3E-43 299.9 33.4 347 78-433 92-469 (472)
106 cd00609 AAT_like Aspartate ami 100.0 2.9E-34 6.3E-39 285.1 37.7 344 41-425 1-349 (350)
107 COG3977 Alanine-alpha-ketoisov 100.0 1.5E-33 3.3E-38 255.3 29.3 355 36-433 28-414 (417)
108 KOG0633 Histidinol phosphate a 100.0 3.4E-34 7.3E-39 254.7 23.1 331 37-428 40-375 (375)
109 PRK13238 tnaA tryptophanase/L- 100.0 2.4E-33 5.2E-38 285.6 32.9 351 37-433 35-436 (460)
110 KOG0258 Alanine aminotransfera 100.0 1.5E-33 3.2E-38 263.9 28.0 345 78-431 105-470 (475)
111 PRK10534 L-threonine aldolase; 100.0 1.4E-31 3E-36 264.7 28.8 322 40-429 1-332 (333)
112 TIGR03576 pyridox_MJ0158 pyrid 100.0 6.5E-31 1.4E-35 259.3 31.1 282 88-428 56-345 (346)
113 cd00617 Tnase_like Tryptophana 100.0 1.8E-29 3.8E-34 253.8 31.8 321 80-433 47-411 (431)
114 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 8.4E-29 1.8E-33 248.0 32.4 301 88-431 53-369 (370)
115 PRK06939 2-amino-3-ketobutyrat 100.0 1.5E-28 3.2E-33 249.0 32.9 345 36-431 40-394 (397)
116 PLN02721 threonine aldolase 100.0 1.4E-28 3E-33 245.2 31.2 334 38-430 5-352 (353)
117 TIGR01822 2am3keto_CoA 2-amino 100.0 5.3E-28 1.2E-32 244.6 34.4 339 36-431 36-390 (393)
118 TIGR00858 bioF 8-amino-7-oxono 100.0 2.9E-28 6.4E-33 243.4 32.1 338 36-425 14-360 (360)
119 COG1448 TyrB Aspartate/tyrosin 100.0 3E-28 6.5E-33 230.0 29.9 362 10-427 4-395 (396)
120 PRK10874 cysteine sulfinate de 100.0 4.1E-28 8.9E-33 246.0 32.9 341 39-431 19-399 (401)
121 PLN02483 serine palmitoyltrans 100.0 1.2E-27 2.6E-32 246.5 36.1 349 37-435 99-471 (489)
122 PLN02822 serine palmitoyltrans 100.0 5.2E-28 1.1E-32 248.6 33.1 354 38-432 109-479 (481)
123 PF12897 Aminotran_MocR: Alani 100.0 2.4E-28 5.3E-33 230.9 27.5 322 77-429 59-414 (425)
124 cd06502 TA_like Low-specificit 100.0 4.1E-28 8.8E-33 240.4 30.0 321 47-426 5-337 (338)
125 TIGR03392 FeS_syn_CsdA cystein 100.0 1.5E-27 3.4E-32 241.5 33.9 331 39-431 16-396 (398)
126 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.8E-27 4E-32 240.0 34.3 340 37-430 32-381 (385)
127 cd00378 SHMT Serine-glycine hy 100.0 3.3E-27 7.2E-32 239.5 33.0 347 39-432 20-387 (402)
128 PRK13392 5-aminolevulinate syn 100.0 1.8E-27 4E-32 241.7 30.5 342 39-431 47-398 (410)
129 PRK05958 8-amino-7-oxononanoat 100.0 8.9E-27 1.9E-31 235.0 32.7 336 36-428 37-385 (385)
130 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 6.7E-27 1.5E-31 233.7 30.7 300 87-428 45-360 (361)
131 cd06451 AGAT_like Alanine-glyo 100.0 1.2E-26 2.5E-31 231.7 30.1 295 88-429 34-356 (356)
132 PRK02948 cysteine desulfurase; 100.0 3.9E-27 8.4E-32 237.3 26.5 296 88-432 45-376 (381)
133 PRK02627 acetylornithine amino 100.0 8.1E-27 1.8E-31 236.2 28.9 337 36-431 37-395 (396)
134 TIGR01979 sufS cysteine desulf 100.0 7.5E-26 1.6E-30 229.6 32.1 340 38-431 17-402 (403)
135 PLN02855 Bifunctional selenocy 100.0 9.9E-26 2.1E-30 230.1 31.3 341 38-432 31-420 (424)
136 TIGR00707 argD acetylornithine 100.0 6.8E-26 1.5E-30 228.1 29.4 329 37-428 26-379 (379)
137 cd06454 KBL_like KBL_like; thi 100.0 3.4E-25 7.3E-30 220.4 33.2 297 87-427 47-348 (349)
138 PRK07049 methionine gamma-lyas 100.0 2.3E-25 4.9E-30 225.7 32.2 227 79-349 77-314 (427)
139 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.3E-25 5E-30 222.1 31.3 295 88-428 33-355 (355)
140 PRK09295 bifunctional cysteine 99.9 3.5E-25 7.7E-30 224.8 31.4 294 88-429 69-403 (406)
141 PRK07179 hypothetical protein; 99.9 6.5E-25 1.4E-29 222.8 32.3 295 87-432 100-400 (407)
142 PRK09064 5-aminolevulinate syn 99.9 7.2E-25 1.6E-29 222.6 31.4 343 38-431 46-398 (407)
143 TIGR02326 transamin_PhnW 2-ami 99.9 1E-24 2.3E-29 218.2 31.5 298 88-429 37-361 (363)
144 PRK03244 argD acetylornithine 99.9 2.9E-25 6.4E-30 224.8 27.2 333 36-432 41-396 (398)
145 TIGR01976 am_tr_V_VC1184 cyste 99.9 6.5E-25 1.4E-29 222.3 29.2 330 40-424 18-397 (397)
146 TIGR03403 nifS_epsilon cystein 99.9 5.9E-25 1.3E-29 221.4 28.2 307 81-433 35-378 (382)
147 cd06453 SufS_like Cysteine des 99.9 4.1E-25 8.8E-30 222.0 26.8 289 87-424 44-373 (373)
148 TIGR01821 5aminolev_synth 5-am 99.9 3.3E-24 7.2E-29 217.4 32.6 300 86-431 90-397 (402)
149 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.9E-24 4.1E-29 217.8 30.1 305 86-431 63-382 (387)
150 PRK13479 2-aminoethylphosphona 99.9 4.3E-24 9.4E-29 214.1 32.1 300 87-432 38-365 (368)
151 PLN02409 serine--glyoxylate am 99.9 4.5E-24 9.8E-29 215.9 31.4 310 86-433 38-375 (401)
152 cd06450 DOPA_deC_like DOPA dec 99.9 9.3E-25 2E-29 217.0 25.9 316 51-426 11-344 (345)
153 PRK01278 argD acetylornithine 99.9 4.2E-24 9.1E-29 215.7 31.0 277 111-430 88-388 (389)
154 cd00613 GDC-P Glycine cleavage 99.9 3.5E-24 7.6E-29 217.1 30.4 327 38-424 20-398 (398)
155 PLN02242 methionine gamma-lyas 99.9 5.6E-24 1.2E-28 214.8 30.8 218 87-353 77-303 (418)
156 PRK08247 cystathionine gamma-s 99.9 3.8E-24 8.1E-29 213.6 27.2 295 79-430 46-364 (366)
157 cd00610 OAT_like Acetyl ornith 99.9 7.2E-24 1.6E-28 215.9 28.9 345 36-428 34-413 (413)
158 TIGR03402 FeS_nifS cysteine de 99.9 8.2E-24 1.8E-28 212.9 28.8 295 88-433 44-375 (379)
159 PRK00011 glyA serine hydroxyme 99.9 3.1E-23 6.7E-28 211.3 32.6 344 38-430 25-389 (416)
160 TIGR01977 am_tr_V_EF2568 cyste 99.9 8.2E-24 1.8E-28 212.7 27.5 295 86-426 44-375 (376)
161 TIGR03812 tyr_de_CO2_Arch tyro 99.9 3.1E-23 6.7E-28 208.3 31.5 289 89-426 62-372 (373)
162 PRK13520 L-tyrosine decarboxyl 99.9 5.8E-23 1.3E-27 206.2 31.6 293 89-429 62-370 (371)
163 PRK13393 5-aminolevulinate syn 99.9 8.7E-23 1.9E-27 207.2 32.8 298 88-431 92-397 (406)
164 PRK06234 methionine gamma-lyas 99.9 7.2E-23 1.6E-27 206.4 29.7 290 79-430 58-397 (400)
165 PRK00451 glycine dehydrogenase 99.9 5.2E-23 1.1E-27 211.5 28.2 328 39-428 69-446 (447)
166 PRK05093 argD bifunctional N-s 99.9 6.5E-23 1.4E-27 207.8 28.4 275 111-430 97-400 (403)
167 TIGR02080 O_succ_thio_ly O-suc 99.9 1.5E-22 3.4E-27 202.5 28.6 218 79-347 45-268 (382)
168 PRK02936 argD acetylornithine 99.9 2.6E-22 5.7E-27 201.8 30.4 332 35-428 26-377 (377)
169 PRK06767 methionine gamma-lyas 99.9 3.6E-22 7.9E-27 200.6 30.3 291 79-429 55-384 (386)
170 TIGR01437 selA_rel uncharacter 99.9 2.4E-22 5.2E-27 200.3 28.4 285 87-428 42-363 (363)
171 PLN03227 serine palmitoyltrans 99.9 8E-22 1.7E-26 198.4 32.4 315 82-432 39-384 (392)
172 PRK06460 hypothetical protein; 99.9 3.4E-22 7.3E-27 199.9 29.2 212 86-347 45-261 (376)
173 TIGR00713 hemL glutamate-1-sem 99.9 2.4E-22 5.2E-27 205.0 28.1 343 36-430 46-422 (423)
174 PRK08045 cystathionine gamma-s 99.9 6.6E-22 1.4E-26 198.0 30.7 218 79-347 46-269 (386)
175 PRK04073 rocD ornithine--oxo-a 99.9 3.6E-22 7.7E-27 201.9 27.7 269 111-428 97-395 (396)
176 PLN02994 1-aminocyclopropane-1 99.9 3.5E-24 7.5E-29 184.5 11.0 147 1-147 6-153 (153)
177 PRK08133 O-succinylhomoserine 99.9 8.2E-22 1.8E-26 198.1 28.6 210 87-347 62-277 (390)
178 PRK07504 O-succinylhomoserine 99.9 1.6E-21 3.5E-26 196.3 30.6 217 79-347 59-282 (398)
179 cd00614 CGS_like CGS_like: Cys 99.9 1.4E-21 3E-26 195.5 29.6 217 80-348 35-258 (369)
180 COG0156 BioF 7-keto-8-aminopel 99.9 2.4E-21 5.2E-26 190.2 30.5 302 82-427 80-387 (388)
181 PRK14012 cysteine desulfurase; 99.9 6.1E-22 1.3E-26 200.9 27.3 294 87-433 50-382 (404)
182 PRK08861 cystathionine gamma-s 99.9 2.1E-21 4.5E-26 193.9 30.5 217 79-347 47-270 (388)
183 PRK04260 acetylornithine amino 99.9 2.8E-21 6E-26 194.1 29.7 328 35-427 26-374 (375)
184 TIGR02006 IscS cysteine desulf 99.9 1.1E-21 2.5E-26 198.7 26.7 296 87-433 48-380 (402)
185 PRK07582 cystathionine gamma-l 99.9 4.8E-21 1E-25 191.0 30.6 282 79-430 45-365 (366)
186 PRK07505 hypothetical protein; 99.9 1.1E-20 2.3E-25 191.6 33.6 293 88-430 93-399 (402)
187 PRK07050 cystathionine beta-ly 99.9 4.2E-21 9.1E-26 192.9 29.9 293 79-430 59-391 (394)
188 PRK08776 cystathionine gamma-s 99.9 5.5E-21 1.2E-25 192.5 30.6 217 79-347 54-277 (405)
189 PRK08249 cystathionine gamma-s 99.9 3.7E-21 8E-26 193.4 28.8 214 81-347 60-280 (398)
190 PRK07810 O-succinylhomoserine 99.9 3.3E-21 7.1E-26 194.1 28.4 217 79-347 64-287 (403)
191 COG0520 csdA Selenocysteine ly 99.9 8.7E-21 1.9E-25 189.7 30.4 296 87-429 67-404 (405)
192 PRK07811 cystathionine gamma-s 99.9 1.1E-20 2.3E-25 189.9 31.0 217 80-347 56-278 (388)
193 TIGR01328 met_gam_lyase methio 99.9 4.8E-21 1E-25 192.5 28.0 216 79-347 53-277 (391)
194 TIGR01325 O_suc_HS_sulf O-succ 99.9 6.8E-21 1.5E-25 191.0 28.6 217 79-347 48-270 (380)
195 PRK07503 methionine gamma-lyas 99.9 1.5E-20 3.2E-25 189.6 30.5 216 79-347 59-283 (403)
196 PRK08088 4-aminobutyrate amino 99.9 1.6E-20 3.4E-25 191.4 30.8 311 92-431 86-424 (425)
197 PRK12381 bifunctional succinyl 99.9 1.4E-20 3.1E-25 190.7 29.5 285 111-433 96-402 (406)
198 PLN02955 8-amino-7-oxononanoat 99.9 5.4E-20 1.2E-24 184.8 31.2 293 87-433 148-464 (476)
199 TIGR03235 DNA_S_dndA cysteine 99.9 1.9E-21 4.2E-26 193.8 20.5 282 88-420 44-348 (353)
200 KOG1411 Aspartate aminotransfe 99.9 3.4E-21 7.3E-26 178.5 20.0 368 7-429 27-424 (427)
201 PRK00854 rocD ornithine--oxo-a 99.9 2.4E-20 5.2E-25 189.1 27.8 285 88-429 85-400 (401)
202 PRK05968 hypothetical protein; 99.9 7.8E-20 1.7E-24 183.7 30.8 287 80-430 58-386 (389)
203 PRK04366 glycine dehydrogenase 99.9 6.7E-20 1.4E-24 189.0 30.5 315 79-433 99-451 (481)
204 PRK08064 cystathionine beta-ly 99.9 4.6E-20 1E-24 185.4 28.5 282 87-433 55-385 (390)
205 PLN00144 acetylornithine trans 99.9 5.7E-20 1.2E-24 184.4 28.5 289 90-431 57-381 (382)
206 PRK08574 cystathionine gamma-s 99.9 7.6E-20 1.7E-24 183.3 29.3 216 80-347 48-269 (385)
207 PRK07269 cystathionine gamma-s 99.9 2.8E-20 6.1E-25 184.9 25.7 296 79-429 48-363 (364)
208 TIGR02379 ECA_wecE TDP-4-keto- 99.9 7.8E-20 1.7E-24 182.7 28.2 174 89-299 30-207 (376)
209 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 8.5E-20 1.9E-24 185.2 28.7 165 79-288 51-219 (418)
210 PTZ00125 ornithine aminotransf 99.9 1.3E-19 2.8E-24 183.7 30.1 286 111-432 88-397 (400)
211 PRK05937 8-amino-7-oxononanoat 99.9 2E-19 4.4E-24 180.2 30.4 295 86-434 56-354 (370)
212 PRK09028 cystathionine beta-ly 99.9 1.7E-19 3.8E-24 180.0 29.3 215 81-347 54-277 (394)
213 PLN02651 cysteine desulfurase 99.9 7.7E-20 1.7E-24 183.0 26.7 280 88-418 45-364 (364)
214 PRK08248 O-acetylhomoserine am 99.9 1.9E-19 4E-24 182.5 29.4 157 87-287 65-225 (431)
215 COG1104 NifS Cysteine sulfinat 99.9 1.4E-19 3.1E-24 174.7 26.1 302 87-436 45-383 (386)
216 TIGR01329 cysta_beta_ly_E cyst 99.9 4.1E-19 9E-24 177.8 30.2 281 88-430 49-375 (378)
217 PRK07671 cystathionine beta-ly 99.9 2.9E-19 6.3E-24 178.7 28.8 216 79-347 44-266 (377)
218 PRK06702 O-acetylhomoserine am 99.9 2.6E-19 5.6E-24 180.2 28.0 288 87-433 62-427 (432)
219 TIGR01324 cysta_beta_ly_B cyst 99.9 8.8E-19 1.9E-23 174.9 29.7 283 88-429 52-375 (377)
220 TIGR00700 GABAtrnsam 4-aminobu 99.9 1E-18 2.2E-23 177.8 30.7 292 112-429 95-419 (420)
221 PRK06084 O-acetylhomoserine am 99.8 1E-18 2.2E-23 177.1 29.9 163 81-287 54-219 (425)
222 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.3E-18 2.8E-23 172.6 29.4 323 81-433 66-429 (450)
223 TIGR03246 arg_catab_astC succi 99.8 2.7E-18 5.8E-23 173.6 32.3 330 36-430 33-395 (397)
224 cd00615 Orn_deC_like Ornithine 99.8 3.5E-20 7.7E-25 179.7 17.6 167 87-285 60-231 (294)
225 cd00616 AHBA_syn 3-amino-5-hyd 99.8 6.1E-19 1.3E-23 175.7 26.5 285 85-425 17-352 (352)
226 PRK05939 hypothetical protein; 99.8 1.8E-18 3.8E-23 173.9 29.8 209 88-347 49-284 (397)
227 PLN02509 cystathionine beta-ly 99.8 2.1E-18 4.5E-23 175.2 29.1 218 80-347 125-349 (464)
228 PRK13034 serine hydroxymethylt 99.8 5.6E-18 1.2E-22 171.8 32.2 342 39-431 29-393 (416)
229 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.3E-18 2.7E-23 174.8 26.8 170 87-297 34-205 (379)
230 PRK06176 cystathionine gamma-s 99.8 2.7E-18 5.9E-23 171.8 29.1 216 79-347 44-266 (380)
231 KOG1412 Aspartate aminotransfe 99.8 5.9E-18 1.3E-22 155.0 27.4 318 79-432 67-407 (410)
232 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.5E-18 3.2E-23 174.2 25.9 170 89-296 30-203 (375)
233 PRK09792 4-aminobutyrate trans 99.8 1.3E-17 2.8E-22 169.4 32.2 293 112-429 102-420 (421)
234 TIGR01885 Orn_aminotrans ornit 99.8 4.1E-18 8.8E-23 172.7 28.5 291 88-429 81-401 (401)
235 PRK06918 4-aminobutyrate amino 99.8 1.5E-17 3.3E-22 170.5 32.8 357 34-433 50-446 (451)
236 PRK04612 argD acetylornithine 99.8 6.9E-18 1.5E-22 170.3 29.5 340 36-432 38-405 (408)
237 PRK08360 4-aminobutyrate amino 99.8 2.1E-17 4.7E-22 168.4 33.4 354 35-433 38-429 (443)
238 PRK13237 tyrosine phenol-lyase 99.8 1.9E-17 4.1E-22 164.7 31.0 322 80-433 72-436 (460)
239 PRK00062 glutamate-1-semialdeh 99.8 7.8E-18 1.7E-22 171.5 28.7 346 36-431 48-425 (426)
240 PF00266 Aminotran_5: Aminotra 99.8 9E-18 2E-22 168.5 28.0 284 88-420 45-371 (371)
241 PLN02624 ornithine-delta-amino 99.8 2E-17 4.3E-22 170.2 30.5 297 88-433 119-447 (474)
242 TIGR01814 kynureninase kynuren 99.8 8.8E-18 1.9E-22 170.5 27.0 275 109-428 84-405 (406)
243 PRK13580 serine hydroxymethylt 99.8 5.7E-17 1.2E-21 163.2 32.3 351 38-431 49-446 (493)
244 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.2E-17 4.7E-22 166.2 29.4 296 85-428 28-380 (380)
245 PF04864 Alliinase_C: Allinase 99.8 6.8E-19 1.5E-23 165.0 16.8 288 88-427 45-362 (363)
246 PRK05967 cystathionine beta-ly 99.8 5.9E-17 1.3E-21 161.6 31.1 211 89-347 63-280 (395)
247 KOG1368 Threonine aldolase [Am 99.8 1.3E-17 2.8E-22 152.0 23.8 344 39-441 22-380 (384)
248 PRK06777 4-aminobutyrate amino 99.8 6.7E-17 1.4E-21 164.2 31.2 353 34-429 36-420 (421)
249 COG2008 GLY1 Threonine aldolas 99.8 2.9E-17 6.3E-22 155.5 26.1 331 41-428 2-341 (342)
250 PTZ00094 serine hydroxymethylt 99.8 9.5E-17 2.1E-21 164.8 31.6 346 38-432 34-410 (452)
251 TIGR03531 selenium_SpcS O-phos 99.8 1E-16 2.2E-21 161.3 30.8 309 88-427 103-443 (444)
252 PRK07495 4-aminobutyrate amino 99.8 2.3E-16 5.1E-21 160.1 32.9 358 31-432 33-423 (425)
253 PRK05994 O-acetylhomoserine am 99.8 1.2E-16 2.6E-21 162.3 30.8 155 88-286 65-223 (427)
254 COG0075 Serine-pyruvate aminot 99.8 9.5E-16 2.1E-20 149.5 33.9 305 88-433 36-366 (383)
255 PRK07812 O-acetylhomoserine am 99.8 2.1E-16 4.5E-21 160.2 29.5 288 87-433 70-434 (436)
256 KOG1359 Glycine C-acetyltransf 99.8 4.3E-17 9.2E-22 148.3 21.8 343 34-432 63-414 (417)
257 COG4992 ArgD Ornithine/acetylo 99.8 1.7E-16 3.6E-21 153.3 26.5 333 34-433 38-401 (404)
258 PRK08117 4-aminobutyrate amino 99.8 5.5E-16 1.2E-20 158.5 32.1 297 111-433 103-432 (433)
259 PRK08134 O-acetylhomoserine am 99.8 2.8E-16 6.1E-21 159.4 29.0 156 87-286 65-224 (433)
260 KOG1549 Cysteine desulfurase N 99.8 1.2E-16 2.5E-21 155.2 24.7 211 35-288 39-257 (428)
261 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.1E-16 6.7E-21 155.9 27.5 283 88-429 57-386 (386)
262 TIGR02407 ectoine_ectB diamino 99.8 1E-15 2.2E-20 155.2 31.5 351 34-430 31-412 (412)
263 PRK06058 4-aminobutyrate amino 99.8 1E-15 2.2E-20 156.5 30.6 350 37-430 55-442 (443)
264 cd01494 AAT_I Aspartate aminot 99.8 3.1E-17 6.8E-22 145.2 16.0 167 88-286 2-169 (170)
265 PRK03715 argD acetylornithine 99.8 1.3E-15 2.8E-20 153.4 29.5 330 37-430 35-393 (395)
266 PRK15407 lipopolysaccharide bi 99.7 1.6E-15 3.4E-20 154.4 29.5 171 88-300 65-247 (438)
267 COG1103 Archaea-specific pyrid 99.7 1.2E-15 2.5E-20 137.6 24.6 304 87-431 62-381 (382)
268 PRK02769 histidine decarboxyla 99.7 2.3E-15 4.9E-20 150.2 29.3 293 89-433 64-375 (380)
269 PRK08114 cystathionine beta-ly 99.7 2.9E-15 6.2E-20 149.3 28.8 209 87-347 63-280 (395)
270 PRK05964 adenosylmethionine--8 99.7 4.3E-15 9.4E-20 151.4 30.5 346 35-431 39-423 (423)
271 PLN03226 serine hydroxymethylt 99.7 5.6E-15 1.2E-19 151.4 31.3 348 39-431 35-420 (475)
272 PLN02724 Molybdenum cofactor s 99.7 2.4E-15 5.2E-20 164.1 28.8 313 88-433 80-491 (805)
273 PRK09264 diaminobutyrate--2-ox 99.7 1.4E-14 3E-19 147.6 32.5 287 113-433 104-419 (425)
274 PLN02880 tyrosine decarboxylas 99.7 1.1E-14 2.4E-19 149.8 31.4 329 82-433 114-487 (490)
275 COG0626 MetC Cystathionine bet 99.7 1.5E-14 3.4E-19 142.1 30.5 211 87-347 64-282 (396)
276 TIGR00709 dat 2,4-diaminobutyr 99.7 2.2E-14 4.8E-19 146.6 32.5 358 35-434 36-439 (442)
277 PLN02590 probable tyrosine dec 99.7 2.9E-14 6.3E-19 147.0 33.2 330 81-433 161-535 (539)
278 PLN02414 glycine dehydrogenase 99.7 7.8E-15 1.7E-19 159.5 30.1 310 86-433 564-910 (993)
279 PRK06541 hypothetical protein; 99.7 2.6E-14 5.6E-19 146.4 31.4 350 37-431 51-456 (460)
280 COG0160 GabT 4-aminobutyrate a 99.7 2.9E-14 6.3E-19 141.9 30.6 355 34-431 52-446 (447)
281 PF00464 SHMT: Serine hydroxym 99.7 5.2E-14 1.1E-18 138.9 30.4 337 39-422 21-397 (399)
282 PRK08593 4-aminobutyrate amino 99.7 1.3E-13 2.7E-18 141.0 34.1 294 112-433 104-432 (445)
283 COG0112 GlyA Glycine/serine hy 99.7 7.7E-14 1.7E-18 133.1 29.8 349 39-432 27-392 (413)
284 COG0399 WecE Predicted pyridox 99.7 2.1E-14 4.6E-19 140.3 26.8 171 88-300 36-210 (374)
285 PRK06434 cystathionine gamma-l 99.7 3.6E-14 7.8E-19 141.5 29.1 207 87-347 65-278 (384)
286 PRK11522 putrescine--2-oxoglut 99.7 4.2E-14 9E-19 144.6 29.9 347 37-433 81-454 (459)
287 PRK05613 O-acetylhomoserine am 99.7 2.8E-14 6E-19 144.8 28.3 210 88-347 71-322 (437)
288 PLN02271 serine hydroxymethylt 99.7 1.1E-13 2.3E-18 140.3 32.1 308 82-429 186-539 (586)
289 TIGR01364 serC_1 phosphoserine 99.7 1.5E-14 3.3E-19 143.2 25.1 286 90-430 37-348 (349)
290 COG0001 HemL Glutamate-1-semia 99.7 9.8E-14 2.1E-18 135.6 30.1 336 37-433 52-431 (432)
291 TIGR02617 tnaA_trp_ase tryptop 99.7 9.3E-14 2E-18 136.8 29.6 350 39-433 42-444 (467)
292 KOG1360 5-aminolevulinate synt 99.7 5.6E-15 1.2E-19 139.8 20.1 299 88-433 218-527 (570)
293 TIGR03372 putres_am_tran putre 99.7 1.1E-13 2.4E-18 140.5 30.9 336 37-428 74-442 (442)
294 PLN03032 serine decarboxylase; 99.7 6.3E-14 1.4E-18 138.9 28.3 287 88-426 64-372 (374)
295 PRK03080 phosphoserine aminotr 99.7 4.9E-14 1.1E-18 141.5 28.0 289 88-433 50-376 (378)
296 PRK05769 4-aminobutyrate amino 99.7 2.1E-13 4.6E-18 139.2 32.8 309 90-430 97-439 (441)
297 PRK05639 4-aminobutyrate amino 99.7 4.6E-13 1E-17 137.0 34.1 352 36-431 51-444 (457)
298 cd00611 PSAT_like Phosphoserin 99.7 1.7E-14 3.7E-19 143.7 23.1 282 88-428 46-354 (355)
299 PF01041 DegT_DnrJ_EryC1: DegT 99.7 3.6E-14 7.9E-19 141.8 25.3 285 87-425 26-363 (363)
300 KOG0053 Cystathionine beta-lya 99.7 8.8E-14 1.9E-18 135.1 26.3 217 80-347 72-294 (409)
301 TIGR01788 Glu-decarb-GAD gluta 99.6 2.9E-13 6.4E-18 136.9 30.7 313 89-431 79-430 (431)
302 PRK07678 aminotransferase; Val 99.6 7E-13 1.5E-17 135.8 32.0 314 92-431 91-450 (451)
303 PRK05355 3-phosphoserine/phosp 99.6 2E-13 4.4E-18 135.8 23.8 268 113-430 68-358 (360)
304 PLN02482 glutamate-1-semialdeh 99.6 1.6E-12 3.4E-17 133.2 30.6 333 37-430 98-473 (474)
305 PRK07482 hypothetical protein; 99.6 2.4E-12 5.3E-17 132.1 32.0 351 36-431 48-455 (461)
306 PF01212 Beta_elim_lyase: Beta 99.6 4.8E-15 1E-19 142.0 11.1 187 81-295 24-216 (290)
307 COG2873 MET17 O-acetylhomoseri 99.6 4.3E-13 9.2E-18 126.8 23.7 296 87-430 63-425 (426)
308 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.3E-14 2.8E-19 143.8 14.1 180 87-289 67-256 (417)
309 PLN02760 4-aminobutyrate:pyruv 99.6 1.8E-12 3.9E-17 134.0 30.5 350 36-433 87-494 (504)
310 PRK06943 adenosylmethionine--8 99.6 3.7E-12 8E-17 130.3 32.4 346 36-431 52-447 (453)
311 PRK06917 hypothetical protein; 99.6 5.1E-12 1.1E-16 129.2 33.3 360 34-433 27-440 (447)
312 PRK15029 arginine decarboxylas 99.6 5.7E-13 1.2E-17 141.4 27.0 178 87-286 206-399 (755)
313 PRK06062 hypothetical protein; 99.6 2.5E-12 5.4E-17 131.6 30.8 352 35-434 50-449 (451)
314 PRK12389 glutamate-1-semialdeh 99.6 6.2E-12 1.3E-16 128.2 33.2 342 35-430 50-427 (428)
315 TIGR03799 NOD_PanD_pyr putativ 99.6 2E-12 4.3E-17 133.6 29.8 316 84-422 123-517 (522)
316 PRK06082 4-aminobutyrate amino 99.6 6.1E-12 1.3E-16 129.0 33.1 309 90-434 113-455 (459)
317 PRK06105 aminotransferase; Pro 99.6 2.7E-12 5.9E-17 131.7 30.5 354 35-434 45-453 (460)
318 PRK05965 hypothetical protein; 99.6 5.2E-12 1.1E-16 129.6 32.4 309 90-431 90-448 (459)
319 PRK09221 beta alanine--pyruvat 99.6 5.8E-12 1.3E-16 128.7 32.6 305 91-430 93-443 (445)
320 PRK07481 hypothetical protein; 99.6 8.8E-12 1.9E-16 127.6 34.0 311 90-431 86-446 (449)
321 PRK07046 aminotransferase; Val 99.6 4.4E-12 9.6E-17 129.7 31.1 330 37-431 74-451 (453)
322 PLN02263 serine decarboxylase 99.6 3.8E-12 8.3E-17 128.2 29.9 293 87-431 130-444 (470)
323 PRK13360 omega amino acid--pyr 99.6 6.9E-12 1.5E-16 128.1 32.2 346 37-430 45-440 (442)
324 PRK04311 selenocysteine syntha 99.6 2.6E-12 5.6E-17 130.9 28.8 292 88-429 129-463 (464)
325 PRK12403 putative aminotransfe 99.6 1E-11 2.2E-16 127.5 33.2 295 111-432 115-454 (460)
326 PRK00615 glutamate-1-semialdeh 99.6 5.3E-12 1.1E-16 128.2 30.3 346 36-431 51-429 (433)
327 PRK04013 argD acetylornithine/ 99.6 2.4E-12 5.2E-17 127.8 27.0 265 111-431 81-361 (364)
328 PRK07986 adenosylmethionine--8 99.6 4.8E-12 1E-16 128.5 29.6 340 37-431 42-424 (428)
329 PRK07483 hypothetical protein; 99.6 9.6E-12 2.1E-16 127.0 31.5 355 35-432 27-439 (443)
330 PRK05630 adenosylmethionine--8 99.6 6.1E-12 1.3E-16 127.7 29.7 337 35-431 37-421 (422)
331 PRK06173 adenosylmethionine--8 99.6 6E-12 1.3E-16 127.9 29.6 283 111-431 104-426 (429)
332 KOG2862 Alanine-glyoxylate ami 99.6 1.2E-11 2.6E-16 114.1 28.3 285 111-432 68-384 (385)
333 PRK08742 adenosylmethionine--8 99.5 1.1E-11 2.4E-16 127.2 31.5 352 36-431 62-468 (472)
334 TIGR01366 serC_3 phosphoserine 99.5 1.2E-12 2.6E-17 130.5 23.3 285 88-431 43-361 (361)
335 PRK06149 hypothetical protein; 99.5 1.3E-11 2.8E-16 137.5 33.4 350 37-430 584-970 (972)
336 PRK06938 diaminobutyrate--2-ox 99.5 3E-11 6.6E-16 123.9 33.6 292 113-431 128-461 (464)
337 PRK05367 glycine dehydrogenase 99.5 1.3E-11 2.7E-16 135.3 32.5 310 86-433 538-878 (954)
338 PRK13578 ornithine decarboxyla 99.5 2E-12 4.3E-17 136.0 24.9 173 88-286 176-368 (720)
339 PRK06916 adenosylmethionine--8 99.5 2.6E-11 5.5E-16 124.5 32.3 308 91-433 100-458 (460)
340 PRK06148 hypothetical protein; 99.5 1.2E-11 2.6E-16 137.9 31.9 352 36-431 622-1011(1013)
341 PRK07036 hypothetical protein; 99.5 1.5E-11 3.3E-16 126.3 30.4 354 36-434 49-456 (466)
342 PRK07480 putative aminotransfe 99.5 8.7E-12 1.9E-16 127.7 28.5 311 90-433 94-451 (456)
343 PRK07030 adenosylmethionine--8 99.5 2.8E-11 6.1E-16 124.2 32.1 307 90-431 90-447 (466)
344 TIGR00508 bioA adenosylmethion 99.5 9.1E-12 2E-16 126.8 27.5 281 111-430 105-426 (427)
345 PRK06931 diaminobutyrate--2-ox 99.5 7.8E-11 1.7E-15 120.8 33.0 356 37-433 57-457 (459)
346 COG0076 GadB Glutamate decarbo 99.5 5.6E-12 1.2E-16 128.0 24.2 251 87-366 98-381 (460)
347 PRK15400 lysine decarboxylase 99.5 4.5E-12 9.8E-17 133.2 23.7 170 88-283 197-376 (714)
348 PRK12566 glycine dehydrogenase 99.5 2E-11 4.4E-16 130.8 28.8 320 76-433 526-879 (954)
349 KOG1357 Serine palmitoyltransf 99.5 1E-12 2.2E-17 126.8 16.5 306 86-433 182-505 (519)
350 TIGR00461 gcvP glycine dehydro 99.5 3.9E-11 8.5E-16 129.4 29.5 311 86-433 526-870 (939)
351 TIGR01365 serC_2 phosphoserine 99.5 4.3E-11 9.4E-16 118.7 26.4 293 88-427 37-370 (374)
352 TIGR00474 selA seryl-tRNA(sec) 99.5 6E-11 1.3E-15 120.6 28.0 287 88-424 124-453 (454)
353 PRK06209 glutamate-1-semialdeh 99.4 5.8E-11 1.2E-15 121.2 27.0 334 33-433 43-408 (431)
354 PRK15399 lysine decarboxylase 99.4 5.3E-11 1.1E-15 125.2 26.4 172 88-286 197-380 (713)
355 PF00282 Pyridoxal_deC: Pyrido 99.4 6.4E-11 1.4E-15 118.1 24.2 262 85-364 74-372 (373)
356 TIGR00699 GABAtrns_euk 4-amino 99.4 2.5E-10 5.4E-15 116.5 26.6 280 111-428 122-464 (464)
357 PRK08297 L-lysine aminotransfe 99.4 1E-09 2.2E-14 112.3 30.8 284 111-431 110-442 (443)
358 COG1982 LdcC Arginine/lysine/o 99.3 6E-10 1.3E-14 112.9 26.2 172 86-287 70-246 (557)
359 PLN02414 glycine dehydrogenase 99.3 5.4E-10 1.2E-14 122.2 27.0 277 88-426 150-465 (993)
360 PLN02452 phosphoserine transam 99.3 3.3E-09 7.2E-14 105.3 29.9 332 39-430 7-363 (365)
361 TIGR03251 LAT_fam L-lysine 6-t 99.3 4.2E-09 9E-14 107.6 30.8 281 111-426 103-430 (431)
362 KOG1358 Serine palmitoyltransf 99.3 7.3E-11 1.6E-15 112.1 15.9 309 82-430 135-465 (467)
363 COG0161 BioA Adenosylmethionin 99.3 2.1E-09 4.5E-14 106.8 26.7 293 111-433 105-446 (449)
364 PRK05367 glycine dehydrogenase 99.3 9.6E-10 2.1E-14 120.7 26.8 283 79-425 105-437 (954)
365 COG3033 TnaA Tryptophanase [Am 99.3 2.1E-09 4.6E-14 101.3 24.3 330 78-433 71-447 (471)
366 PLN02974 adenosylmethionine-8- 99.3 1.3E-08 2.8E-13 110.1 32.3 215 190-428 583-816 (817)
367 KOG1404 Alanine-glyoxylate ami 99.2 1.4E-08 3.1E-13 96.9 27.6 312 79-424 86-432 (442)
368 PF06838 Met_gamma_lyase: Meth 99.2 1.5E-08 3.3E-13 96.6 25.0 220 117-366 78-319 (403)
369 KOG1401 Acetylornithine aminot 99.2 1.4E-08 3.1E-13 97.6 24.7 291 110-432 115-432 (433)
370 PRK12462 phosphoserine aminotr 99.1 4E-08 8.7E-13 96.8 26.7 332 40-430 5-362 (364)
371 PF00202 Aminotran_3: Aminotra 99.1 6.3E-09 1.4E-13 102.9 20.8 248 36-317 14-291 (339)
372 KOG1402 Ornithine aminotransfe 99.1 6.4E-08 1.4E-12 90.5 23.6 276 111-429 116-426 (427)
373 TIGR03811 tyr_de_CO2_Ent tyros 99.1 1.3E-07 2.8E-12 99.1 29.0 197 84-295 117-405 (608)
374 COG1003 GcvP Glycine cleavage 98.9 7.7E-07 1.7E-11 86.5 25.2 318 77-434 93-451 (496)
375 KOG1383 Glutamate decarboxylas 98.8 4.8E-07 1E-11 88.6 18.9 305 86-433 116-449 (491)
376 COG3844 Kynureninase [Amino ac 98.8 2.5E-06 5.4E-11 80.0 21.8 276 109-431 91-403 (407)
377 TIGR00461 gcvP glycine dehydro 98.8 6.3E-06 1.4E-10 89.8 28.3 262 109-425 124-426 (939)
378 COG1921 SelA Selenocysteine sy 98.8 2.6E-06 5.6E-11 83.1 22.8 178 110-317 82-267 (395)
379 PF05889 SLA_LP_auto_ag: Solub 98.7 4.3E-06 9.4E-11 81.6 23.7 299 111-429 74-389 (389)
380 COG4100 Cystathionine beta-lya 98.7 1.3E-06 2.8E-11 80.8 18.5 193 76-301 54-263 (416)
381 KOG1403 Predicted alanine-glyo 98.7 3.4E-06 7.3E-11 78.1 20.7 293 111-431 102-438 (452)
382 KOG0628 Aromatic-L-amino-acid/ 98.6 6.2E-05 1.3E-09 74.0 27.0 313 86-433 109-474 (511)
383 KOG2467 Glycine/serine hydroxy 98.6 4.1E-05 8.9E-10 73.0 23.7 284 109-429 101-425 (477)
384 PF02347 GDC-P: Glycine cleava 98.6 1E-05 2.2E-10 80.8 20.9 286 80-424 95-429 (429)
385 COG0403 GcvP Glycine cleavage 98.5 0.00031 6.7E-09 68.8 27.4 269 109-427 135-447 (450)
386 KOG0629 Glutamate decarboxylas 98.4 0.0001 2.3E-09 71.7 23.1 294 111-428 160-507 (510)
387 KOG1405 4-aminobutyrate aminot 98.4 5.9E-05 1.3E-09 71.6 18.9 217 175-430 255-483 (484)
388 PF03841 SelA: L-seryl-tRNA se 98.3 1.1E-06 2.3E-11 85.1 5.8 213 110-347 61-296 (367)
389 PRK12566 glycine dehydrogenase 98.0 0.0011 2.5E-08 72.2 23.0 262 109-425 139-439 (954)
390 COG1932 SerC Phosphoserine ami 97.8 0.01 2.2E-07 57.4 22.9 332 39-431 5-364 (365)
391 KOG3843 Predicted serine hydro 97.7 0.0014 3E-08 60.1 14.3 307 111-439 76-411 (432)
392 KOG2040 Glycine dehydrogenase 97.6 0.016 3.5E-07 59.6 22.2 306 86-433 578-921 (1001)
393 PLN02672 methionine S-methyltr 96.8 0.067 1.5E-06 60.1 18.5 192 79-297 419-625 (1082)
394 KOG3846 L-kynurenine hydrolase 96.6 0.51 1.1E-05 44.7 19.3 160 109-291 126-295 (465)
395 KOG2790 Phosphoserine aminotra 96.1 0.56 1.2E-05 44.0 16.3 334 37-430 5-368 (370)
396 KOG2040 Glycine dehydrogenase 92.1 18 0.0004 38.2 18.9 87 324-425 391-478 (1001)
397 KOG1201 Hydroxysteroid 17-beta 88.6 6 0.00013 37.8 10.9 104 109-219 36-144 (300)
398 COG2102 Predicted ATPases of P 86.4 7.8 0.00017 35.3 9.8 98 114-227 4-115 (223)
399 PF05368 NmrA: NmrA-like famil 84.9 5.8 0.00013 36.6 8.9 97 114-229 1-99 (233)
400 PRK04296 thymidine kinase; Pro 79.8 24 0.00052 31.5 10.6 125 120-271 16-143 (190)
401 PRK08265 short chain dehydroge 76.1 41 0.00088 31.5 11.6 101 111-218 6-108 (261)
402 PF00106 adh_short: short chai 73.9 33 0.00071 29.3 9.6 100 114-219 3-110 (167)
403 TIGR00290 MJ0570_dom MJ0570-re 70.3 37 0.00081 31.3 9.3 98 114-227 4-114 (223)
404 PF13460 NAD_binding_10: NADH( 68.3 28 0.00061 30.4 8.0 89 114-224 1-89 (183)
405 TIGR00289 conserved hypothetic 67.9 68 0.0015 29.6 10.4 98 114-227 4-114 (222)
406 PRK06483 dihydromonapterin red 67.1 79 0.0017 28.8 11.2 77 113-197 4-80 (236)
407 smart00642 Aamy Alpha-amylase 66.7 25 0.00054 30.8 7.1 26 209-234 68-93 (166)
408 PRK06463 fabG 3-ketoacyl-(acyl 66.1 97 0.0021 28.6 11.7 80 111-198 7-86 (255)
409 PRK12936 3-ketoacyl-(acyl-carr 64.8 94 0.002 28.3 11.3 83 111-199 6-88 (245)
410 PRK06500 short chain dehydroge 62.6 1E+02 0.0022 28.2 11.1 81 112-198 7-87 (249)
411 PRK05872 short chain dehydroge 62.1 97 0.0021 29.6 11.1 104 109-218 7-114 (296)
412 PRK12481 2-deoxy-D-gluconate 3 61.9 97 0.0021 28.7 10.8 83 111-200 8-91 (251)
413 COG0505 CarA Carbamoylphosphat 61.6 20 0.00042 35.2 5.8 66 134-215 178-245 (368)
414 TIGR01470 cysG_Nterm siroheme 61.6 66 0.0014 29.2 9.2 96 109-232 7-103 (205)
415 PRK07063 short chain dehydroge 61.4 1.2E+02 0.0025 28.1 11.3 104 110-218 6-115 (260)
416 COG1088 RfbB dTDP-D-glucose 4, 60.4 56 0.0012 31.5 8.4 111 113-240 2-137 (340)
417 COG1105 FruK Fructose-1-phosph 58.4 1.8E+02 0.0038 28.3 11.7 62 170-234 108-169 (310)
418 PRK07067 sorbitol dehydrogenas 57.4 1.4E+02 0.003 27.6 11.0 81 112-198 7-87 (257)
419 PRK06182 short chain dehydroge 57.2 1.2E+02 0.0027 28.3 10.7 97 113-218 5-103 (273)
420 PRK05678 succinyl-CoA syntheta 57.0 39 0.00085 32.5 7.1 76 140-233 49-125 (291)
421 COG4221 Short-chain alcohol de 56.6 1.4E+02 0.003 27.9 10.2 102 113-221 7-113 (246)
422 PRK07825 short chain dehydroge 56.4 1.3E+02 0.0027 28.2 10.7 81 111-198 5-85 (273)
423 cd02742 GH20_hexosaminidase Be 55.9 24 0.00051 34.3 5.5 68 151-230 24-91 (303)
424 PRK07231 fabG 3-ketoacyl-(acyl 55.0 1.7E+02 0.0036 26.7 11.1 85 111-200 5-90 (251)
425 PF02662 FlpD: Methyl-viologen 54.8 44 0.00094 27.7 6.2 59 157-225 28-91 (124)
426 PRK05717 oxidoreductase; Valid 54.8 1.7E+02 0.0037 26.9 11.2 83 110-198 9-91 (255)
427 PF00265 TK: Thymidine kinase; 54.6 30 0.00064 30.6 5.5 123 118-271 12-140 (176)
428 COG1091 RfbD dTDP-4-dehydrorha 53.9 1.1E+02 0.0024 29.3 9.4 97 174-287 38-153 (281)
429 KOG1199 Short-chain alcohol de 53.8 76 0.0016 27.9 7.5 98 114-218 12-118 (260)
430 COG0296 GlgB 1,4-alpha-glucan 53.6 16 0.00035 38.9 4.2 34 203-236 206-239 (628)
431 PRK06841 short chain dehydroge 53.3 1.8E+02 0.004 26.6 11.3 82 111-198 15-96 (255)
432 COG1087 GalE UDP-glucose 4-epi 53.2 53 0.0011 31.7 7.0 97 113-229 2-114 (329)
433 TIGR03573 WbuX N-acetyl sugar 52.4 1.5E+02 0.0033 29.3 10.7 109 111-240 60-176 (343)
434 PRK06935 2-deoxy-D-gluconate 3 52.3 1.9E+02 0.0041 26.7 11.1 82 110-198 14-98 (258)
435 cd06568 GH20_SpHex_like A subg 52.3 24 0.00053 34.7 5.0 69 151-230 26-94 (329)
436 TIGR01019 sucCoAalpha succinyl 52.0 51 0.0011 31.7 7.0 76 140-233 47-123 (286)
437 PRK06196 oxidoreductase; Provi 52.0 1.3E+02 0.0029 28.9 10.2 82 110-198 25-106 (315)
438 PRK06139 short chain dehydroge 51.5 1.6E+02 0.0036 28.7 10.8 103 110-218 6-113 (330)
439 PRK06194 hypothetical protein; 51.5 2.1E+02 0.0046 26.8 11.5 81 112-198 7-90 (287)
440 COG2984 ABC-type uncharacteriz 51.2 2.4E+02 0.0053 27.4 11.7 127 81-232 66-196 (322)
441 PRK08862 short chain dehydroge 51.1 1.6E+02 0.0036 26.8 10.2 83 111-200 5-91 (227)
442 PF01902 ATP_bind_4: ATP-bindi 50.6 59 0.0013 29.9 6.9 99 114-228 4-115 (218)
443 PRK08589 short chain dehydroge 50.4 2.2E+02 0.0047 26.7 11.4 100 111-218 6-112 (272)
444 PRK05876 short chain dehydroge 50.1 2.2E+02 0.0048 26.8 11.3 101 111-218 6-112 (275)
445 PRK07024 short chain dehydroge 48.0 2.3E+02 0.0049 26.2 10.9 78 113-196 4-83 (257)
446 cd06562 GH20_HexA_HexB-like Be 47.8 29 0.00063 34.4 4.8 63 152-230 27-89 (348)
447 PRK08220 2,3-dihydroxybenzoate 47.5 2.2E+02 0.0049 25.9 11.3 77 110-198 7-83 (252)
448 PRK05562 precorrin-2 dehydroge 46.9 2.4E+02 0.0051 26.0 10.3 95 110-232 24-119 (223)
449 TIGR01832 kduD 2-deoxy-D-gluco 46.9 2.3E+02 0.0049 25.9 11.5 83 110-198 4-87 (248)
450 PRK06484 short chain dehydroge 46.4 1.7E+02 0.0036 30.6 10.6 80 112-197 6-85 (520)
451 PRK05867 short chain dehydroge 46.4 2.4E+02 0.0052 25.9 11.3 82 111-198 9-93 (253)
452 PRK06179 short chain dehydroge 46.1 2.1E+02 0.0046 26.5 10.4 96 112-218 5-102 (270)
453 PRK08263 short chain dehydroge 45.7 2.1E+02 0.0046 26.7 10.4 100 113-218 5-106 (275)
454 PRK05693 short chain dehydroge 45.5 2.4E+02 0.0051 26.4 10.6 96 114-218 4-101 (274)
455 PRK07109 short chain dehydroge 45.4 2.5E+02 0.0054 27.4 11.0 100 111-216 8-112 (334)
456 PRK10595 SOS cell division inh 45.3 2.1E+02 0.0045 25.0 10.4 98 113-225 30-135 (164)
457 PRK12859 3-ketoacyl-(acyl-carr 44.8 1.6E+02 0.0035 27.2 9.3 102 110-218 5-125 (256)
458 cd06570 GH20_chitobiase-like_1 44.7 30 0.00064 33.7 4.2 56 157-229 31-86 (311)
459 PF10087 DUF2325: Uncharacteri 44.6 1.4E+02 0.0029 23.3 7.3 68 146-229 13-80 (97)
460 PRK08277 D-mannonate oxidoredu 44.3 2.7E+02 0.0059 26.0 11.3 83 110-198 9-94 (278)
461 PRK07523 gluconate 5-dehydroge 43.6 2.6E+02 0.0057 25.6 11.5 83 110-198 9-94 (255)
462 PRK08278 short chain dehydroge 43.4 2.8E+02 0.0061 25.9 11.6 81 112-198 7-97 (273)
463 PRK08063 enoyl-(acyl carrier p 43.1 2.4E+02 0.0051 25.7 10.1 81 112-198 5-89 (250)
464 PRK10538 malonic semialdehyde 42.9 2.7E+02 0.0058 25.5 10.5 79 114-198 3-81 (248)
465 PRK06128 oxidoreductase; Provi 42.9 3E+02 0.0066 26.2 11.4 101 111-218 55-164 (300)
466 PRK12743 oxidoreductase; Provi 42.7 2.1E+02 0.0046 26.3 9.8 80 113-198 4-87 (256)
467 PRK06114 short chain dehydroge 42.6 2.7E+02 0.0059 25.6 11.0 83 109-197 6-92 (254)
468 TIGR00623 sula cell division i 42.5 2.4E+02 0.0051 24.8 9.8 84 131-227 56-141 (168)
469 cd00951 KDGDH 5-dehydro-4-deox 42.2 1.3E+02 0.0028 28.9 8.2 50 171-223 16-65 (289)
470 TIGR03325 BphB_TodD cis-2,3-di 42.2 1.4E+02 0.003 27.8 8.4 83 111-200 5-87 (262)
471 PF08543 Phos_pyr_kin: Phospho 42.1 70 0.0015 29.8 6.2 54 173-234 43-96 (246)
472 PRK06079 enoyl-(acyl carrier p 42.0 1.4E+02 0.0031 27.6 8.4 84 110-200 6-91 (252)
473 PRK03170 dihydrodipicolinate s 42.0 1.2E+02 0.0026 29.1 8.0 50 170-222 16-65 (292)
474 PRK06200 2,3-dihydroxy-2,3-dih 41.6 1.3E+02 0.0028 27.9 8.1 82 110-197 5-86 (263)
475 cd00950 DHDPS Dihydrodipicolin 41.4 1.3E+02 0.0028 28.7 8.1 57 162-223 9-65 (284)
476 PRK12935 acetoacetyl-CoA reduc 41.4 2.6E+02 0.0056 25.4 10.1 82 111-198 6-91 (247)
477 PRK08226 short chain dehydroge 41.0 2.9E+02 0.0063 25.4 11.4 81 111-198 6-89 (263)
478 PRK07856 short chain dehydroge 40.7 2.9E+02 0.0063 25.3 11.1 98 110-218 5-104 (252)
479 cd06569 GH20_Sm-chitobiase-lik 40.6 50 0.0011 34.0 5.3 78 151-229 30-115 (445)
480 PRK08176 pdxK pyridoxal-pyrido 40.5 1.7E+02 0.0037 27.9 8.7 55 173-234 68-129 (281)
481 PRK06484 short chain dehydroge 40.5 2.2E+02 0.0048 29.7 10.4 79 113-197 271-349 (520)
482 PRK05786 fabG 3-ketoacyl-(acyl 40.2 2.7E+02 0.0059 25.1 10.0 84 111-199 5-89 (238)
483 KOG2741 Dimeric dihydrodiol de 40.1 1.1E+02 0.0024 30.1 7.1 73 144-234 60-132 (351)
484 PRK12937 short chain dehydroge 40.1 2.9E+02 0.0062 25.0 10.2 83 110-198 4-90 (245)
485 KOG1371 UDP-glucose 4-epimeras 40.1 1E+02 0.0022 30.0 6.9 104 111-231 2-126 (343)
486 cd06563 GH20_chitobiase-like T 40.0 42 0.00091 33.4 4.6 74 152-230 27-105 (357)
487 PRK08643 acetoin reductase; Va 39.9 3E+02 0.0065 25.2 11.1 99 114-218 5-108 (256)
488 PF08659 KR: KR domain; Inter 39.9 73 0.0016 28.0 5.7 44 151-200 47-90 (181)
489 PRK12384 sorbitol-6-phosphate 39.8 3E+02 0.0066 25.2 10.4 81 113-198 4-88 (259)
490 PRK08085 gluconate 5-dehydroge 39.7 3E+02 0.0065 25.2 11.4 103 110-218 8-115 (254)
491 cd00408 DHDPS-like Dihydrodipi 39.7 1.1E+02 0.0024 29.1 7.3 51 170-223 12-62 (281)
492 PRK07791 short chain dehydroge 39.6 3.3E+02 0.0073 25.7 11.4 83 111-200 6-100 (286)
493 PF03652 UPF0081: Uncharacteri 39.5 95 0.0021 26.1 6.0 59 172-235 37-99 (135)
494 PRK08335 translation initiatio 39.3 3.5E+02 0.0076 25.8 11.2 116 90-229 94-216 (275)
495 TIGR00196 yjeF_cterm yjeF C-te 39.0 2.2E+02 0.0047 26.9 9.2 97 113-231 26-126 (272)
496 COG1648 CysG Siroheme synthase 38.9 1.9E+02 0.0042 26.3 8.3 90 109-227 10-100 (210)
497 TIGR00524 eIF-2B_rel eIF-2B al 38.9 2.3E+02 0.0049 27.5 9.3 109 110-234 117-242 (303)
498 COG0816 Predicted endonuclease 38.8 1.2E+02 0.0026 25.8 6.4 56 173-233 40-98 (141)
499 COG0031 CysK Cysteine synthase 38.5 2.3E+02 0.005 27.4 9.0 84 77-165 30-116 (300)
500 PF04412 DUF521: Protein of un 38.4 1.4E+02 0.0031 30.1 8.0 48 171-224 268-316 (400)
No 1
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.7e-70 Score=559.10 Aligned_cols=467 Identities=84% Similarity=1.316 Sum_probs=398.5
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
|.++|.++++....++.+|+..|..+..++|++..+|.|+|+|+++||+++.+.+.++++...+.......+........
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (468)
T PLN02450 1 MKLLSRKATCNSHGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELA 80 (468)
T ss_pred CcccchhhcccccCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhh
Confidence 78999999999999999999999999999999999999999999999999999999999876432111000111123556
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
.|+++.|.++||++||+|++++++.++++++++|++|+|+++++..++.+++++||.|++++|+|+.|...+....|+++
T Consensus 81 ~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~ 160 (468)
T PLN02450 81 LFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEI 160 (468)
T ss_pred cCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEE
Confidence 79999999999999999999888866678999999999999999999999999999999999999999888874339999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+++|++.+++|.+|++.+++++++..+.+.++++|++||||||||.++|.+++++|+++|++|+++||+||+|+++.|++
T Consensus 161 v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 161 VPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS 240 (468)
T ss_pred EEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence 99999766789999999999987655555689999999999999999999999999999999999999999999988876
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
..+.++.+......+.+.+..+++++++||||.||+||+|+||++++++.+.+.+.+...++.++.+.|.++..+|.+..
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~ 320 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKK 320 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCch
Confidence 55556555432100001113578999999999999999999999998776666666665555578999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+...++++.+++++++++.+.+.|+++|+++.++++|+|+|++++.......+..+.+++.++++++||.|.||+.|+..
T Consensus 321 ~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~ 400 (468)
T PLN02450 321 FTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT 400 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC
Confidence 75567889999999999999999999999999999999999999865544444555678899998899999999999876
Q ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccEEEEEeeccccc
Q 043923 401 EPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLHNQSNHQSIKNSRRRSLTKWVFRLSFDDRVTG 467 (469)
Q Consensus 401 ~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (469)
.++|+||+++.++++++++++++|++++++....--|.+-||-.||++|.--.||+||++|.||-..
T Consensus 401 ~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (468)
T PLN02450 401 EPGWFRVCFANMSEETLDLAMKRLKSFVESDSGRRINKSSHQRLKNLRRKTVSKWVFRLSFHDREPE 467 (468)
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHHHHHhccccccccchhcccccccchhhhccceEEeeccCCcC
Confidence 7899999999668999999999999999888865667789999999999999999999999999654
No 2
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-70 Score=515.44 Aligned_cols=425 Identities=68% Similarity=1.161 Sum_probs=405.9
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
|.+||.++....++.++|||.+|++|..|+|++..+|.|+|+|+..||.++.+++..|+++.+++...+.++...+.++.
T Consensus 36 ~~~lS~~~~~~~~~e~S~yf~g~~~y~~npy~~~~Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la 115 (471)
T KOG0256|consen 36 NNLLSSKAVDDKHGEDSSYFYGWKAYEKNPYDPIKNPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELA 115 (471)
T ss_pred hhhcccccccccccccchHHHHHHhcccCCCCCCCCchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHh
Confidence 46899999999999999999999999999999999999999999999999999999999999888887888888889999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
.|+++.|.+.+|+++|+|+.+..+..+..+|+++++++|++.|...++.+|.+|||..++|.|.|+++...+++..|+++
T Consensus 116 ~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgvei 195 (471)
T KOG0256|consen 116 MFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEI 195 (471)
T ss_pred hcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceE
Confidence 99999999999999999999998888889999999999999999999999999999999999999999999998889999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
++|.+..+++|+++++++|.++++..+.+.++++|+++||+||.|.+++++++..+++++.++++++|+||+|+..+|+.
T Consensus 196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~ 275 (471)
T KOG0256|consen 196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCc
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
..+.|+.++..+.. ...+++.+++|+||.||+||+|+|.|...++.+.++..++..++.+|+..|..++.+|.|..
T Consensus 276 ~~F~Sv~ev~~~~~----~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~ 351 (471)
T KOG0256|consen 276 SEFRSVLEVRKDPH----LDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEE 351 (471)
T ss_pred cCceEHHHHhhccc----cCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHH
Confidence 99999999877431 14578999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+.+.++.+.+++++.+.+++.+.|+++||++.+..+|+|+|+++.......+++.+.+++++++.+.++.+.||+.|...
T Consensus 352 f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~ 431 (471)
T KOG0256|consen 352 FTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCH 431 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceec
Confidence 99999999999999999999999999999999999999999999999888899999999999999889999999999999
Q ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 401 EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 401 ~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+||+|+||+...++.++.+++||++++.
T Consensus 432 EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 432 EPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 99999999998788888889999999998
No 3
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5e-69 Score=553.22 Aligned_cols=432 Identities=54% Similarity=0.993 Sum_probs=376.7
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
|++||+++++..+++++|||.+|++|..++|++..+|.|+|+|+.+||++..+.+.+++++.+...+...+++..+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (496)
T PLN02376 9 GAILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIA 88 (496)
T ss_pred hhhhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhh
Confidence 46899999999999999999999999999999999999999999999999999999999998766555555666677788
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
.|+++.|.++||++||+|+++.++.++.+++++|++|+|+++|+..++.+|++|||.|++++|+|+.|...+....|+++
T Consensus 89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v 168 (496)
T PLN02376 89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEI 168 (496)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEE
Confidence 89999999999999999999888766778999999999999999999999999999999999999999987774339999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+++|++.+++|.+|++.++.+++.....+.++++|+++|||||||.++|.+++++|+++|++|+++||+||+|+++.|++
T Consensus 169 v~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 169 IPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred EEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 99999766788999999998876544334589999999999999999999999999999999999999999999988887
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
..+.++.++.++.+.. ....+++++++||||.||+||+|+||++++++.+.+.......++.++++.|.++.++|.+..
T Consensus 249 ~~~~si~~l~~~~~~~-~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~ 327 (496)
T PLN02376 249 GDFVSVAEVVNDVDIS-EVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQ 327 (496)
T ss_pred CCcccHHHhhcccccc-ccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChh
Confidence 7777877775421000 001246788999999999999999999998777777766676677789999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc-CChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~-~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
++++++++.+++++++++.+.+.|++.|+++.++++|+|+|++++..... ..++.+.+++..+++++||.|.||+.|+.
T Consensus 328 ~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~ 407 (496)
T PLN02376 328 FVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC 407 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC
Confidence 87888999999999999999999999999999999999999999865432 33345568899999888999999999987
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 400 TEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 400 ~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++|+|||++..+++.+++++++|++++.+.++
T Consensus 408 ~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 408 TEPGWFRICFANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 7789999999976889999999999999986554
No 4
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.3e-67 Score=531.16 Aligned_cols=437 Identities=60% Similarity=1.039 Sum_probs=379.9
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
|++||.|+++..++.++||+..|+.+..++|++..||.|+|+|+++||.+..+.+.+++++.++.......+.....++.
T Consensus 10 ~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (447)
T PLN02607 10 AVGLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENA 89 (447)
T ss_pred hhhhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhh
Confidence 46899999999999999999999999999999999999999999999999999999999998765443322322344566
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
.|.+..|.++||+++|+|++++++..+++++++|++|+|+++|+..++.++++|||.|+++.|+|+.|...+....|+++
T Consensus 90 ~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~v 169 (447)
T PLN02607 90 LFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKI 169 (447)
T ss_pred ccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEE
Confidence 79999999999999999999988766678999999999999999999999999999999999999999888774349999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
++++++.+++|.+|++++++++++..+.+.++++++++|||||||.++|.+++++|+++|++|+++||+||+|+++.|++
T Consensus 170 v~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 170 VPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA 249 (447)
T ss_pred EEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence 99999877788999999999998777777799999999999999999999999999999999999999999999988887
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
.++.++.++..+.+. .+..+++++++||||.||++|+|+||+++.++.+...+.....+..+|++.|.++.++|.+..
T Consensus 250 ~~f~S~~s~~~~~~~--~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~ 327 (447)
T PLN02607 250 SEFVSVAEIVEARGY--KGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEE 327 (447)
T ss_pred CCcccHHHHHhhcCC--CCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCch
Confidence 667787776432100 012478999999999999999999999997766766666666665688999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+.+++++..+++++++++.+.+.|++.|+++.++++|+|+|++++..........+.+++.++++++||.|.||+.|+..
T Consensus 328 ~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~ 407 (447)
T PLN02607 328 FTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCS 407 (447)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCC
Confidence 87788999999999999999999999999999999999999999865432223445678888998889999999999887
Q ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcccccccc
Q 043923 401 EPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLHNQS 439 (469)
Q Consensus 401 ~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~~ 439 (469)
.++|+||+++.++++.++++++||.++++++++++..|.
T Consensus 408 ~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~~~~~~ 446 (447)
T PLN02607 408 EPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTASSQQQ 446 (447)
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 899999999976899999999999999998888766553
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-58 Score=460.06 Aligned_cols=357 Identities=26% Similarity=0.469 Sum_probs=311.0
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc-EE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK-IV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~-i~ 115 (469)
.++|+|++|++.++ |+.+.+++.+.... ... .|.+..|.++||++||+++.++++ +.+++++ |+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~-----------~~~-~Y~~~~G~~~LReaia~~~~~~~~--~~~~~~~eii 93 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEE-----------GGT-HYTPSAGIPELREAIAEKYKRRYG--LDVDPEEEII 93 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----------ccC-CCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 68999999999886 45566666553211 111 777899999999999999999987 5577776 99
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCC-CCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSL-NGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++|+..++.++++|||.|++++|.|+.|...+... |.+++.++++.. .+|.+|++++++++++ ++|+
T Consensus 94 vt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~-gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~ 166 (393)
T COG0436 94 VTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLA-GGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKA 166 (393)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceE
Confidence 9999999999999999999999999999999999999988 999999998654 4899999999999986 8999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++||||||.+++.+++++|+++|++||++||.||+|.++.|++..+.++.++.+ ..+++|++.||||+|
T Consensus 167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~--------~~~~~i~i~s~SK~~ 238 (393)
T COG0436 167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAG--------ARDRTITINSFSKTY 238 (393)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCC--------CcceEEEEecccccc
Confidence 999999999999999999999999999999999999999999999866678777744 347899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v 351 (469)
+|+|||+||++++++.+.+.+.+++.. .+++.+.|.++.++|+..+. ...++..++.+++||+.+.+.|.+. |+++
T Consensus 239 ~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~ 317 (393)
T COG0436 239 GMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSV 317 (393)
T ss_pred cccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 999999999999756666666544433 35788999999999998754 4567888899999999999999988 5998
Q ss_pred ec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 352 LK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 352 ~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.. |+|+||+|++++.. .++.+++.+|++++||.|.||+.|+.. +.+++|++++. +++.+++++++|+++++
T Consensus 318 ~~~p~Ga~Y~~~~i~~~------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 318 VKPPEGAFYLFPKIPEL------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLA 390 (393)
T ss_pred ccCCCeeEEEEeecCCC------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHH
Confidence 87 88999999999865 345689999999999999999999985 78999999996 77999999999999988
Q ss_pred hh
Q 043923 430 SI 431 (469)
Q Consensus 430 ~~ 431 (469)
.+
T Consensus 391 ~~ 392 (393)
T COG0436 391 EY 392 (393)
T ss_pred hc
Confidence 65
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=9.5e-53 Score=424.27 Aligned_cols=354 Identities=19% Similarity=0.301 Sum_probs=286.7
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
+.++|+|+.|+++++ ++.+.+++.+.... .....|++..|.++||+++|+++++.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHD-----------PSTHGYLLFHGTLDFREAAAQWYEQRFG--LAVDPETEV 95 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------cccCCCCCCCCCHHHHHHHHHHHHHhhC--CcCCCcCeE
Confidence 456899999999986 56666666653110 1245799889999999999999988776 457888 69
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||.|++++|+|+.|...+... |++++.+|++.+++|.+|++++++.+.+ ++++
T Consensus 96 ~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 168 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLA-GGQIYPMPLRAENDFLPVFADIPTEVLA------QARL 168 (388)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEECCCccCCCCCHHHHHHhhcc------cceE
Confidence 99999999999999999999999999999999999999887 9999999998777888999988877654 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC-ccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG-FVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++.. ..++.++.+ ..+++++++||||+
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~--------~~~~vi~~~SfSK~ 240 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADP--------EKSVSIEFFTLSKS 240 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCC--------CcccEEEEeecccc
Confidence 999999999999999999999999999999999999999998776543 345555422 23578999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhccccc--C-cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFGL--V-SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS 350 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~~--~-s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~ 350 (469)
||+||+|+||++++++ +.+.+.+...... . +.+.+.++.++..+ .+++++.++.++++++.+.+.|+++|+.
T Consensus 241 ~g~~GlRiG~~v~~~~-li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~~~~r~~l~~~L~~~~~~ 315 (388)
T PRK07366 241 YNMGGFRIGFAIGNAQ-LIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIFRQRRDAFINALHQIGWP 315 (388)
T ss_pred cCCcchhheehcCCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999999999999554 4454544443322 2 23344444444332 4568899999999999999999999988
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+..|.+|+|+|++++..... ++.+++.++++++||.|.||+.|+...++|+||+++. +++++++++++|++++
T Consensus 316 ~~~p~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 316 VPLPEATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred ccCCCeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 87889999999999853211 1346777888888999999999976557899999985 8999999999998763
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-52 Score=418.80 Aligned_cols=350 Identities=19% Similarity=0.335 Sum_probs=291.9
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i 114 (469)
..++|||+.|+++++ ++.+.+++.+.... .....|+ ..|.++||++||++++++++ +.+++ ++|
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~y~-~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 96 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ-----------KESYGYT-LSGIQEFHEAVTEYYNNTHN--VILNADKEV 96 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----------cccCCCC-CCCcHHHHHHHHHHHHHHhC--CCCCCCCeE
Confidence 457899999998874 46666666653110 1123455 47999999999999998877 45678 899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||.|++++|+|+.|...+... |++++++|++++++|.+|++++++++.+ ++++
T Consensus 97 ~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 169 (399)
T PRK07681 97 LLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMA-GATSYYMPLKKENDFLPDLELIPEEIAD------KAKM 169 (399)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999999999887 9999999998777899999999888754 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|+++|||||||.++|.+++++|+++|++||++||+||+|.++.|++....++.++.. ..+++|+++||||+|
T Consensus 170 v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~ 241 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG--------AKEVGVEINSLSKSY 241 (399)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC--------CcccEEEEeeccccc
Confidence 999999999999999999999999999999999999999998777655455555422 346899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|+||+|+||++++++ +.+.+..... .++++.+.|.++..+|++. .+++++.++.++++++.+.+.|+++|+++.
T Consensus 242 ~~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 317 (399)
T PRK07681 242 SLAGSRIGYMIGNEE-IVRALTQFKSNTDYGVFLPIQKAACAALRNG---AAFCEKNRGIYQERRDTLVDGFRTFGWNVD 317 (399)
T ss_pred CCccceeEEEecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 999999999999654 4444444432 3457889999999999875 346788888999999999999999999888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
.+.+|+|+|++++... +..+++.++++++||.|.||..|+...++++||+++. +++++++++++|++
T Consensus 318 ~p~~g~f~~~~l~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 318 KPAGSMFVWAEIPKGW------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred CCCeeeEEEEECCCCC------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 8889999999997532 2346788888778999999999986567899999984 88999999999988
No 8
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=9.4e-52 Score=418.52 Aligned_cols=366 Identities=22% Similarity=0.346 Sum_probs=295.5
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
..++|+|+.|+++++ ++.+.+.+.+.... .....|++..|.++||+++|+++++++| +.++++ +|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQD-----------PRTHRYSASKGIPGLRRAQAAYYARRFG--VKLNPDTQV 95 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcC-----------cccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 346899999988764 34444444432110 2346799999999999999999988766 346787 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||+|++++|+|+.|...+... |++++.+|++.+++|..+ +++.++.. .+++++
T Consensus 96 ~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~---l~~~~~~~---~~~~~~ 168 (405)
T PRK09148 96 VATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMA-GGVIRSVPAEPDEEFFPA---LERAVRHS---IPKPIA 168 (405)
T ss_pred EEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhc-CCEEEEEeCCCCCCCccC---HHHHHhhc---cccceE
Confidence 99999999999999999999999999999999998888877 999999998765555444 44444321 137899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++.++.. ..+++++++||||+|
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~--------~~~~~i~~~SfSK~~ 240 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPG--------AKDVTVEFTSMSKTF 240 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCC--------ccCcEEEEecccccc
Confidence 999999999999999999999999999999999999999998776544445544311 235788999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|+||+|+||+++++. +.+.+.+... .++++.+.|.++..+|++. .+++++.++.++++++.+.+.|+++++.+.
T Consensus 241 ~~pGlR~G~~v~~~~-~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 316 (405)
T PRK09148 241 SMAGWRMGFAVGNER-LIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKKRRDVLVESFGRAGWDIP 316 (405)
T ss_pred CCcchheeeeeCCHH-HHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 999999999999554 4455544443 2347789999999999753 457888899999999999999999998888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.|.+|+|+|++++..... .++.+++..+++++||.|.||..|+...++|+||+++ .+++.+.+++++|++++++..
T Consensus 317 ~p~~g~f~~~~l~~~~~~---~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 317 PPAASMFAWAPIPEAFRH---LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred CCCeeEEEEEECCCccCC---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999854321 1234677888878899999999997655789999998 589999999999999999999
Q ss_pred cccccc
Q 043923 433 TTLHNQ 438 (469)
Q Consensus 433 ~~~~~~ 438 (469)
+|+||-
T Consensus 393 ~~~~~~ 398 (405)
T PRK09148 393 ETLHNV 398 (405)
T ss_pred HHHhhc
Confidence 999874
No 9
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-51 Score=415.27 Aligned_cols=366 Identities=20% Similarity=0.338 Sum_probs=293.5
Q ss_pred CCCCeeeeeccccccC-hH-HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-
Q 043923 36 NPTGIIQMGLAENQLS-FD-LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS- 112 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~- 112 (469)
++.++++|+.+.+..+ ++ .+....+.... .....|++..|.++||+++|+++++.++ +.++++
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lR~~ia~~l~~~~~--~~~~~~~ 96 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLCESAQK------------PKTHGYSVSKGIYKLRLAICNWYKRKYN--VDLDPET 96 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHHHHhcC------------CccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCC
Confidence 4457899999876653 33 34333332210 1356899999999999999999988766 456787
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc-CCc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR-HLK 191 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~ 191 (469)
+|++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++++|++.+++|.+|++.+...+++..+. .++
T Consensus 97 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 97 EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILA-GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 7999999999999999999999999999999999999998887 99999999865567889988776555543322 347
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++....++..+.. ..+++++++|||
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~--------~~~~~i~~~S~S 247 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG--------AKDVAVESYTLS 247 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC--------ccccEEEEEecc
Confidence 899999999999999999999999999999999999999999998776544455555421 235788899999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
|+||+||+|+||+++++. +.+.+.+... ...++++.|.++..++... .+++++.++.++++++.+.+.|++.|+
T Consensus 248 K~~~~~GlRiG~iv~~~~-li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 323 (403)
T PRK08636 248 KSYNMAGWRVGFVVGNKK-LVGALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYRKRRDVLIESFANAGW 323 (403)
T ss_pred cccCCccceeeeeeCCHH-HHHHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999655 4444444432 2346677888877776532 567888999999999999999999888
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++..+.+|+|+|++++..... .++.+++..+++++||.|.||..|+..+++++||+++ .+++++++++++|+++++
T Consensus 324 ~~~~p~~g~~~~~~l~~~~~~---~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~ 399 (403)
T PRK08636 324 ELQKPRASMFVWAKIPEPARH---LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLK 399 (403)
T ss_pred cccCCCcceEEEEECCCccCC---CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 888899999999999854321 1234677788888899999999998766789999998 599999999999999997
Q ss_pred hhc
Q 043923 430 SIT 432 (469)
Q Consensus 430 ~~~ 432 (469)
+++
T Consensus 400 ~~~ 402 (403)
T PRK08636 400 ELE 402 (403)
T ss_pred hhc
Confidence 643
No 10
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.1e-51 Score=419.40 Aligned_cols=370 Identities=21% Similarity=0.318 Sum_probs=296.1
Q ss_pred CCCeeeeecccccc-----ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAENQL-----SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~n~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
..++|+|+.|++.+ +++.+.+.+.+.... .....|++..|.++||+++|++++++++ +++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lR~aiA~~~~~~~~--~~~~~ 131 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-----------GKGNSYGPGAGILPARRAVADYMNRDLP--HKLTP 131 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCChHHHHHHHHHHHHHhcC--CCCCc
Confidence 45799999997763 233455554442110 2245798889999999999999998766 45789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
++|++|+|++++|..++.++++|||.|++++|+|+.|...+... |++++.+++.++++|.+|++++++++++ +
T Consensus 132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~l~~~~~~~~d~~~l~~~~~~------~ 204 (462)
T PLN02187 132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYS-GLEVRKFDLLPEKEWEIDLEGIEAIADE------N 204 (462)
T ss_pred ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEeCccccCCccCHHHHHHhcCC------C
Confidence 99999999999999999999999999999999999998888877 9999999987667899999999988754 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..+.. ..++++++|||
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~---------~~~vi~l~SfS 275 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS---------IVPVLTLAGIS 275 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc---------CCcEEEEecch
Confidence 889999999999999999999999999999999999999999998887655556555422 24699999999
Q ss_pred cccCCCcceEEEEEecCH-HH---HHHHHHhcccc----cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043923 272 KDLGLPGFRVGAIYSNDD-MV---VAAATKMSSFG----LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSG 343 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~-~~---~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 343 (469)
|+|++||+|+||++++++ .+ .+.+......+ .++.+.|.++.++|.+.. .+++++.++.++++++.+.+.
T Consensus 276 K~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~~~l~~~r~~l~~~ 353 (462)
T PLN02187 276 KGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKNKILKHNVDLVCDR 353 (462)
T ss_pred hhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998532 22 22333333222 247899999999997532 567899999999999999999
Q ss_pred HHhcCC-c-eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 043923 344 LEKAGI-S-CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 421 (469)
Q Consensus 344 L~~~g~-~-v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l 421 (469)
|++++. . +..|.+|+|+|++++..... ...++.+++.++++++||.+.||+.|+ .++|+||+++. +++.+++++
T Consensus 354 L~~~~~~~~~~~P~gg~fl~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~-~~e~l~~al 429 (462)
T PLN02187 354 LKDIPCVVCPKKPESCTYLLTKLELSLMD-NIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGV-EAHMLEDAL 429 (462)
T ss_pred HhhCCCCcCCCCCCEeEEEEeecChhhCC-CCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCC-CHHHHHHHH
Confidence 998753 2 34678899999988632111 111344677888889999999999996 37899999985 899999999
Q ss_pred HHHHHHHHhhcccccccccccc
Q 043923 422 QRLKAFVDSITTTLHNQSNHQS 443 (469)
Q Consensus 422 ~~L~~~l~~~~~~~~~~~~~~~ 443 (469)
++|+++++++.|+.-+ +++|
T Consensus 430 ~rL~~~l~~~~~~~~~--~~~~ 449 (462)
T PLN02187 430 ERLKGFCTRHAKKTET--ETNS 449 (462)
T ss_pred HHHHHHHHHhhhcccc--cccc
Confidence 9999999988885543 4444
No 11
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-51 Score=414.31 Aligned_cols=358 Identities=16% Similarity=0.283 Sum_probs=289.8
Q ss_pred CCCeeeeeccccc-c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-Cc
Q 043923 37 PTGIIQMGLAENQ-L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SK 113 (469)
Q Consensus 37 ~~~~i~L~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~ 113 (469)
+.+.|+|+.+.+. . +++.+.+.+.+.... .....|++..|.++||++||+++.++++ +++++ ++
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~LR~aia~~l~~~~g--~~~~~~~~ 104 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVER-----------GGVQAYTEYRGDADIRELLAARLAAFTG--APVDAADE 104 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhc-----------CCCccCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCC
Confidence 5678999987654 3 344455544432110 1245799999999999999999998877 44677 89
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc---CCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT---SLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++ .+.+|.+|++++++++++
T Consensus 105 I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------ 177 (405)
T PRK06207 105 LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------ 177 (405)
T ss_pred EEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeccccCcccCCCcCHHHHHHhhhh------
Confidence 999999999999999999999999999999999999888877 9999999986 334688999999998865
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..+.. ..+++++++||
T Consensus 178 ~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~--------~~~~vi~i~Sf 249 (405)
T PRK06207 178 GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPI--------DPENVITIMGP 249 (405)
T ss_pred cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCC--------CcCcEEEEecc
Confidence 7889999999999999999999999999999999999999999998887654444443311 35799999999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA- 347 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 347 (469)
||+||+||+|+||+++++. +.+.+...... .+.+.+.|.++..+|.+. ..++++.++.++++++.+.+.|+++
T Consensus 250 SK~~~lpGlRiG~ii~~~~-l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~ 325 (405)
T PRK06207 250 SKTESLSGYRLGVAFGSPA-IIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP---DGWMKDRIARHQAIRDDLLRVLRGVE 325 (405)
T ss_pred hhhccCcccceEEEEcCHH-HHHHHHHHHhHhccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999998654 44444444332 235678999999999764 2235666677788889999999887
Q ss_pred CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++++.+|++|+|+|++++... .+..+++..+++++||.|.||..|+...++++||+++. +++++++++++|+++
T Consensus 326 ~~~~~~p~gg~fl~~~l~~~~-----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~ 399 (405)
T PRK06207 326 GVFVRAPQAGSYLFPRLPRLA-----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQL 399 (405)
T ss_pred CceecCCCeeEEEEEeCcccC-----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 788888999999999997421 12335777777778999999999976667899999996 899999999999999
Q ss_pred HHhhc
Q 043923 428 VDSIT 432 (469)
Q Consensus 428 l~~~~ 432 (469)
+++.+
T Consensus 400 l~~~~ 404 (405)
T PRK06207 400 IERYR 404 (405)
T ss_pred HHHhh
Confidence 97653
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.9e-51 Score=413.67 Aligned_cols=353 Identities=22% Similarity=0.404 Sum_probs=294.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.|.+.++ ++.+.+++.+... .....|++..|.++||++++++++++++ +.++++ +|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~~I~ 119 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIR------------DGKNQYARGFGVPELNSAIAERFKKDTG--LVVDPEKEVT 119 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 37899999998875 4566666655311 1235799999999999999999998876 456787 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||.|++++|+|..|...++.. |++++.++++++ +|.+|++.+++.+.+ ++++|
T Consensus 120 vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~-~~~~~~~~l~~~~~~------~~k~i 191 (413)
T PLN00175 120 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKTVTLRPP-DFAVPEDELKAAFTS------KTRAI 191 (413)
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEECCcc-cCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999988887 999999999754 488999999988864 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++. +.++.++.. ..+++|+++||||.||
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~--------~~~~vi~i~SfSK~~~ 262 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPG--------MYERTVTMNSLGKTFS 262 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCC--------CcCcEEEEecchhhcc
Confidence 9999999999999999999999999999999999999999877643 345555422 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||+++++..+ ..+.+.. ..++++.+.|.++..+|++. +.++++.++.++++++.+.+.|+++|+++.+
T Consensus 263 ~~G~RiG~~v~~~~l~-~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 338 (413)
T PLN00175 263 LTGWKIGWAIAPPHLT-WGVRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSAKKDILVEGLKEVGFKVYP 338 (413)
T ss_pred CcchheeeeEeCHHHH-HHHHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecC
Confidence 9999999999966544 4343333 23457889999999999775 4568889999999999999999999999999
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT---EPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~---~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
|++|+|+|++++... ..++.+++..+++++||.+.||+.|+.. +.+++||+++. +++++++++++|++++++
T Consensus 339 p~g~~f~~~~~~~~~----~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 339 SSGTYFVMVDHTPFG----FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLKR 413 (413)
T ss_pred CCeeEEEEEeccccC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHhC
Confidence 999999999985210 1123478888888889999999988642 35799999995 899999999999998763
No 13
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=5.9e-51 Score=415.55 Aligned_cols=365 Identities=18% Similarity=0.248 Sum_probs=292.7
Q ss_pred CCCeeeeecccc---cc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN---QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
..++++|+.|++ .+ +|+.+.+++.+.... .....|++..|.++||+++|++++++++ +.++++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~LReaia~~~~~~~g--~~~~~~ 97 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMD-----------DKSYGYCPTKGVLETREFLAELNNKRGG--AQITPD 97 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhccC--CCCCHh
Confidence 346899999887 33 456666666553111 2345799999999999999999988766 457899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|++|+|++++|..++. ++++||.|++++|+|+.|........|++++.+|++++++|.+|+++++++++. .+++
T Consensus 98 ~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~ 172 (433)
T PRK06855 98 DIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKY----NPSI 172 (433)
T ss_pred HEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhc----CCCc
Confidence 99999999999999985 789999999999999988654333238999999988767899999999998863 1267
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++++++|||||||.++|.+++++|+++|++||++||+||+|.++.|++..+.++.++.+ ..++|+++||||
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~---------~~~~I~~~S~SK 243 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG---------DVPGIALKGISK 243 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC---------cCCeEEEecCcc
Confidence 89999999999999999999999999999999999999999998887655567666633 136799999999
Q ss_pred ccCCCcceEEEEEecC----HHHHHHHH---Hhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 273 DLGLPGFRVGAIYSND----DMVVAAAT---KMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~----~~~~~~~~---~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
.|++||+|+||+++++ ..+...+. ... ....++++.|.++..++.++.+ ++++++.++.++++++.+.+.|
T Consensus 244 ~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L 322 (433)
T PRK06855 244 ELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKL 322 (433)
T ss_pred ccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999842 22222222 211 2234678999999999998766 7889999999999999999999
Q ss_pred Hhc-CCceecCCceEEEEEecccccccC----C-----------------hhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 345 EKA-GISCLKSNAGLFCWVDMRHLLRSN----T-----------------FEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 345 ~~~-g~~v~~~~~g~~~~v~~~~~~~~~----~-----------------~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
++. ++++.+|++|||+|+++++..... . ..++.+++..+++++||.+.||+.|+.. .
T Consensus 323 ~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-~ 401 (433)
T PRK06855 323 KDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-L 401 (433)
T ss_pred hcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC-C
Confidence 887 788889999999999998642000 0 0124467778888999999999999753 3
Q ss_pred CeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 403 GWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 403 ~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
.++|||++..+++++++++++|++++++
T Consensus 402 ~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 402 NGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 4599999977999999999999999975
No 14
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=8.7e-51 Score=419.72 Aligned_cols=348 Identities=22% Similarity=0.361 Sum_probs=280.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhhhCC
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~~g 157 (469)
...|++..|.++||++||+++++++| +++++++|++|+|+++++..++++++ ++||.|++++|+|+.|...++.. |
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~-g 184 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLL-G 184 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHc-C
Confidence 45699999999999999999998766 55789999999999999999999998 79999999999999999999887 9
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
.+++.++++++++|.+|++++++++++..+.+.++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 99999999877889999999999997644444578999999999999999999999999999999999999999999988
Q ss_pred cCC-CCccchhhhhhccccccCCc---CCeEEEEccCccc-cCCCcceEEEEEe--cCHHHHHHHHHhc-ccccCcHHHH
Q 043923 238 FSS-PGFVSIMEILKDRNCENTQV---WNRVHIVYSLSKD-LGLPGFRVGAIYS--NDDMVVAAATKMS-SFGLVSSQTQ 309 (469)
Q Consensus 238 ~~~-~~~~s~~~~~~~~~~~~~~~---~~~~i~i~S~SK~-~g~~GlRiG~li~--~~~~~~~~~~~~~-~~~~~s~~~q 309 (469)
|++ ..+.++..+..++. .. ..++|+++||||+ +++||+|+||+++ .++.+.+.+.+.. ..++++.++|
T Consensus 265 ~~~~~~~~s~~~~~~~l~----~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q 340 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELP----AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQ 340 (481)
T ss_pred cCCCCCcccHHHHHHhhc----ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHH
Confidence 853 34556555433210 01 1368999999997 5999999999987 2344544444443 3345788999
Q ss_pred HHHHHHhcCch-----h--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecc--ccccc----CChhH
Q 043923 310 YLLSALLSDKK-----F--TQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMR--HLLRS----NTFEA 375 (469)
Q Consensus 310 ~~~~~~l~~~~-----~--~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~--~~~~~----~~~~~ 375 (469)
.++..++.... + ..+++++.++.++++++.+.+.|+++ |+++.+|++|+|+|++++ ..... ....+
T Consensus 341 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~ 420 (481)
T PTZ00377 341 LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAP 420 (481)
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCc
Confidence 99999996421 1 13334445556899999999999988 899999999999998764 21110 00112
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHHhhccc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
+.+++..+++++||.+.||+.|+.. +++++||+++ .+++++++++++|++++++..++
T Consensus 421 ~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 421 DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 3456778888999999999999853 4579999999 68899999999999999887663
No 15
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=4.9e-51 Score=411.80 Aligned_cols=353 Identities=20% Similarity=0.329 Sum_probs=287.0
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-c
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-K 113 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~ 113 (469)
.+.++|+|+.+.+.++ ++.+.+++.+.... .....|++..|.++||+++|+++++.++ ++++++ +
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~~g--~~~~~~~~ 96 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAEN-----------PANHKYSPFRGYPFLKEAAADFYKREYG--VTLDPETE 96 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcc
Confidence 3457899999977665 35566666553111 2245798889999999999999987766 446788 8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|+++++..++.+++++||+|++++|+|..|...++.. |++++.+|++.+++|.+|++++++++.+ +++
T Consensus 97 i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~ 169 (389)
T PRK08068 97 VAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALA-RAQFETMPLIAENNFLPDYTKIPEEVAE------KAK 169 (389)
T ss_pred EEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEeecccccCCCCCHHHHHHhccc------cce
Confidence 999999999999999999999999999999999999988887 9999999998666889999999988764 789
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++....+...... ..+++++++||||+
T Consensus 170 ~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~--------~~~~~i~~~S~SK~ 241 (389)
T PRK08068 170 LMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG--------AKDVGIELYTLSKT 241 (389)
T ss_pred EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC--------ccCCEEEEecchhc
Confidence 9999999999999999999999999999999999999999987776533334433322 34688999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcccc--cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC 351 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v 351 (469)
||+||+|+||++++++ +.+.+.+....+ +.+++.|.++..++.+. .++++..++.++++++.+.+.|+++|+.+
T Consensus 242 ~g~~GlRiG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~g~~~ 317 (389)
T PRK08068 242 FNMAGWRVAFAVGNES-VIEAINLLQDHLFVSLFGAIQDAAIEALLSD---QSCVAELVARYESRRNAFISACREIGWEV 317 (389)
T ss_pred cCCccceeEeEecCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9999999999998554 545454444332 23455777777777653 35678889999999999999999999998
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
.++.+|+|+|++++... +..++++.+++++||.|+||..|+..+++++||+++. +++.+..++++|+++
T Consensus 318 ~~~~g~~~~~v~~~~~~------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 318 DAPKGSFFAWMPVPKGY------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred cCCCeeEEEEEECCCCC------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 89999999999997532 2346788888778999999999986667899999984 788888888888753
No 16
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1e-50 Score=422.54 Aligned_cols=360 Identities=19% Similarity=0.314 Sum_probs=289.3
Q ss_pred CCeeeeecccc-c--c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAEN-Q--L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
.++|+|+.|.+ + + +|+.+.+++.+. +.....|++..|.++||++||+++.++.+ ..+++++
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lReaia~~~~~~~~--~~~~~~~ 210 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQ-------------LTDTEGYSDSKGLFSARKAIMQYAQLKGL--PNVDVDD 210 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCcChHHHHHHHHHHHHhcCC--CCCChhH
Confidence 47899999655 2 3 234444444432 12235799999999999999999977654 2468999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|+++++..++.+++++||.|++++|+|+.|...+... |.+++.++++++++|.+|++++++++++ +++
T Consensus 211 I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k 283 (517)
T PRK13355 211 IYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLA-GGTAVHYRCDEQSEWYPDIDDIRSKITS------RTK 283 (517)
T ss_pred EEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHC-CCEEEEeecCcccCCCCCHHHHHHhcCc------Cce
Confidence 999999999999999999999999999999999999888887 9999999998777899999999998865 889
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|+++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++.++.+ ...+++++||||+
T Consensus 284 ~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~---------~~~vi~~~S~SK~ 354 (517)
T PRK13355 284 AIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP---------DLFCVTFSGLSKS 354 (517)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC---------CCeEEEEecchhh
Confidence 9999999999999999999999999999999999999999998887655567666633 1357788999999
Q ss_pred cCCCcceEEEEEec--CHH---HHHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 274 LGLPGFRVGAIYSN--DDM---VVAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 274 ~g~~GlRiG~li~~--~~~---~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|+++|+|+||++++ ... +.+.+..... ..+++.++|.++..+|.......+++...++ +.++++++.+.|+++
T Consensus 355 ~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~-~~~~r~~l~~~L~~~ 433 (517)
T PRK13355 355 HMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGR-VYEQRELVYNALNAI 433 (517)
T ss_pred ccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHH-HHHHHHHHHHHHhcC
Confidence 99999999999964 221 2222322222 2447889999999999764333556666544 445679999999988
Q ss_pred -CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 348 -GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 348 -g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
|+++.+|+++||+|++++..... ..++.+++.++++++||.|.||+.|+...++|+||+++ .+++++++++++|++
T Consensus 434 ~g~~~~~p~g~fy~~~~l~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~ 510 (517)
T PRK13355 434 PGISAVKPKAAFYIFPKIDVKKFN--IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLAD 510 (517)
T ss_pred CCcccCCCCeeeEEEeecCcccCC--CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHH
Confidence 89999999999999998742100 12244677888889999999999998667889999997 599999999999999
Q ss_pred HHHhhc
Q 043923 427 FVDSIT 432 (469)
Q Consensus 427 ~l~~~~ 432 (469)
++++++
T Consensus 511 ~~~~~~ 516 (517)
T PRK13355 511 FFSYYR 516 (517)
T ss_pred HHHHhh
Confidence 998664
No 17
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1e-50 Score=410.42 Aligned_cols=353 Identities=18% Similarity=0.321 Sum_probs=287.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCCC-c
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT-FDTS-K 113 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~-~ 113 (469)
..++|+|+.|+++++ ++.+.+++.+. +.....|++..|.++||++||++++++++ +. ++++ +
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~~ 92 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAAN-------------LDGLASYPTTAGLPALREAIAAWLERRYG--LPALDPATQ 92 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHH-------------hhhhcCCCCCCCCHHHHHHHHHHHHHHhC--CCcCCccce
Confidence 457899999999885 56677776653 13456799999999999999999988776 44 6675 8
Q ss_pred EEEeCChHHHHHHHHHHhcCC---CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGATSANETLMFCLAEP---GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~---gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|++|+|+++++..++++++++ ||.|++++|+|..|...+... |++++.+|++++++|.+|++++++.+.+
T Consensus 93 i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~vp~~~~~~~~~d~~~l~~~~~~------ 165 (396)
T PRK09147 93 VLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-GAEPYFLNCDPANNFAPDFDAVPAEVWA------ 165 (396)
T ss_pred EEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-CCEEEEeccCccccCccCHHHHHHHHhh------
Confidence 999999999999999999999 999999999999999888877 9999999998777899999999887754
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC-CccchhhhhhccccccCCcCCeEEEEcc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+++++++||||||||.++|.+++++|+++|++|+++||+||+|.++.|++. ...+........ +.+..+++|+++|
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~---~~~~~~~vi~~~S 242 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAEL---GRDDFKRLVVFHS 242 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhcccc---CccccccEEEEec
Confidence 789999999999999999999999999999999999999999999877653 222222111100 0013479999999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|||.||+||+|+||+++++..+ +.+.+... .++++++.|.++.+.+.+ .+++++.++.++++++.+.+.|.+.
T Consensus 243 ~SK~~~~~GlRiG~~~~~~~l~-~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~~ 317 (396)
T PRK09147 243 LSKRSNVPGLRSGFVAGDAALL-KKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVRENRALYREKFDAVTPILAPV 317 (396)
T ss_pred cccccCCccceeeeecCCHHHH-HHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999965544 44433332 235788899887777754 3457888999999999999999885
Q ss_pred CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeecCCHHHHHHHH
Q 043923 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANMSEDTLKLSM 421 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~~~~e~i~~~l 421 (469)
+.+..|++|+|+|++++. ++.+++.++++++||.+.||..|+. .+.+++||+++. +++++++++
T Consensus 318 -~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l 387 (396)
T PRK09147 318 -LDVQLPDAGFYLWAKVPG--------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAA 387 (396)
T ss_pred -cCCCCCCeeEEEEEECCC--------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHH
Confidence 677778899999999971 1346778888888999999998863 235799999995 789999999
Q ss_pred HHHHHHHH
Q 043923 422 QRLKAFVD 429 (469)
Q Consensus 422 ~~L~~~l~ 429 (469)
++|+++++
T Consensus 388 ~rl~~~~~ 395 (396)
T PRK09147 388 ERIVDFCR 395 (396)
T ss_pred HHHHHHhc
Confidence 99999874
No 18
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-50 Score=409.02 Aligned_cols=363 Identities=20% Similarity=0.283 Sum_probs=292.4
Q ss_pred CCCCCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-
Q 043923 31 YDEVQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT- 108 (469)
Q Consensus 31 ~~~~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~- 108 (469)
+.....+.++|+|+.|+|+++ ++.+.+.+.+.... .....|++ .|.++||+++|++++++++ +.
T Consensus 37 ~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~-----------~~~~~Y~~-~G~~~lr~aia~~~~~~~g--~~~ 102 (410)
T PRK06290 37 AKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKK-----------PENRGYAD-NGIQEFKEAAARYMEKVFG--VKD 102 (410)
T ss_pred HhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCC-CCcHHHHHHHHHHHHHHcC--CCc
Confidence 333334557899999999985 45566655542110 12456885 7999999999999988766 44
Q ss_pred CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 109 FDTS-KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 109 ~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++++ +|++|+|+++++..++.+++++||.|+++.|+|+.|...++.. |++++.+|++++++|.+|++++++++.+
T Consensus 103 ~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~--- 178 (410)
T PRK06290 103 IDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYY-GGEVYNLPLLEENNFLPDLDSIPKDIKE--- 178 (410)
T ss_pred CCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEecCCCcCCcCCHHHHHHhhcc---
Confidence 6776 7999999999999999999999999999999999999888887 9999999998777888999999888764
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++. ..++.++.. ..+++|++
T Consensus 179 ---~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~--------~~~~~I~i 246 (410)
T PRK06290 179 ---KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPG--------AKEVGVEI 246 (410)
T ss_pred ---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCC--------ccccEEEE
Confidence 789999999999999999999999999999999999999999999877643 345444422 34678999
Q ss_pred ccCccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 268 YSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
+||||.||+||+|+||+++++. +.+.+...... .+++.++|.++..+|++..+ +++.++.++++++.+.+.|+
T Consensus 247 ~SfSK~~g~~GlRiG~ii~~~~-l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~ 321 (410)
T PRK06290 247 HSLSKAYNMTGWRLAFVVGNEL-IVKAFATVKDNNDSGQFIAIQKAGIYALDHPEI----TEKIREKYSRRLDKLVKILN 321 (410)
T ss_pred eechhhcCCchhheEeEEeCHH-HHHHHHHHHhccccCCcHHHHHHHHHHhhCcHH----HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999654 44444444332 23456899999999987544 67788899999999999999
Q ss_pred hcCCceecCCceEEEEEeccccccc-CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHHHH
Q 043923 346 KAGISCLKSNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLSMQ 422 (469)
Q Consensus 346 ~~g~~v~~~~~g~~~~v~~~~~~~~-~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~l~ 422 (469)
+.|+.+.++++|+|+|++++..... ....+..++++.|+++.+|.+.||+.|+ +|+||+++.. ++++.+++++
T Consensus 322 ~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~ 397 (410)
T PRK06290 322 EVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILE 397 (410)
T ss_pred hCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHH
Confidence 9999999999999999999854311 0112345788999988788888988663 6999999853 7899999999
Q ss_pred HHHHHHHhhc
Q 043923 423 RLKAFVDSIT 432 (469)
Q Consensus 423 ~L~~~l~~~~ 432 (469)
+|++.|....
T Consensus 398 ~l~~~~~~~~ 407 (410)
T PRK06290 398 EIKRRLSDVE 407 (410)
T ss_pred HHHHHHhhcc
Confidence 9999886543
No 19
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-52 Score=393.45 Aligned_cols=382 Identities=20% Similarity=0.334 Sum_probs=309.0
Q ss_pred cccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCc
Q 043923 10 CNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGL 88 (469)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~ 88 (469)
..+.+..+|+. |.++..-....+..+. |++|.+..+ |+++.+++++.... ....+|....|+
T Consensus 9 ~~~l~~~~~~v--w~e~~~la~e~~~~~~----LgqGfp~~~~P~fv~ea~~~~~~~-----------~~~~qYt~~~G~ 71 (420)
T KOG0257|consen 9 NRNLSTSKPYV--WTEINRLAAEHKVPNP----LGQGFPDFPPPKFVTEAAKNAAKE-----------PSTNQYTRGYGL 71 (420)
T ss_pred cccccccCCcH--HHHHHHHHHhcCCCCc----ccCCCCCCCCcHHHHHHHHHHhcc-----------chhccccccCCc
Confidence 34455555533 6666544432222221 999988886 57788888775321 236789999999
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc--
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-- 166 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-- 166 (469)
++|+++|++.+...++.. ....++|+||+|+.++|..++++++++||+|++.+|.|++|.....++ |...+.++..
T Consensus 72 p~L~~aL~k~~se~~~~~-~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~ma-G~tpv~v~~~~~ 149 (420)
T KOG0257|consen 72 PQLRKALAKAYSEFYGGL-LDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMA-GGTPVFVPLKPK 149 (420)
T ss_pred hHHHHHHHHHHHHHhccc-cCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhc-CCcceeeccccc
Confidence 999999999999876632 234567999999999999999999999999999999999999999988 9999999987
Q ss_pred ----CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 167 ----SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 167 ----~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
....|.+|.+.++.++++ ++|+|++|+||||||.++|+++|++|+++|++||+++|.||+|..+.|++..
T Consensus 150 ~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~ 223 (420)
T KOG0257|consen 150 EGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNK 223 (420)
T ss_pred cccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCc
Confidence 567899999999999987 9999999999999999999999999999999999999999999999999887
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCch
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~ 320 (469)
+.++..+ + +.+++++.++|+||+||+.|||+||+++ ++.+.......... ..++++.|.+.+++++.+.
T Consensus 224 h~r~asl-P-------gm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 224 HIRIASL-P-------GMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred ceeeecC-C-------chhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhh
Confidence 8888877 5 3789999999999999999999999999 55554444443322 2377888888777766543
Q ss_pred hh-----HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc---C---ChhHHHHHHHHHHHhCCe
Q 043923 321 FT-----QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS---N---TFEAEMELWKKIVYDVKL 389 (469)
Q Consensus 321 ~~-----~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~---~---~~~~~~~l~~~ll~~~GI 389 (469)
.+ ..++....+.|+++|+.|.+.|.++|+++..|++++|+|++++..... . ...++..++.+++++.|+
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv 374 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGV 374 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcE
Confidence 10 134566899999999999999999999999999999999999811110 0 112455788999999999
Q ss_pred EEeCCCCCCCCC-----CCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 390 NISPGSSCHCTE-----PGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 390 ~v~pg~~f~~~~-----~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
.+.|++.|+..+ .+++|++++. +++.++.++++|++
T Consensus 375 ~~IP~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 375 VVIPPSAFGSREHIKVAERLVRFCFCK-ADETLRKAIERLKK 415 (420)
T ss_pred EEeCchhcCCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHhh
Confidence 999999999643 3578999985 88999999999883
No 20
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.7e-50 Score=407.34 Aligned_cols=350 Identities=23% Similarity=0.376 Sum_probs=289.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++++|+.|++.++ ++.+.+++.+.... .....|+++.|.++||+++|+|+++.++ ++++++ +|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~~vi 95 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAEN-----------PENHRYPSYEGMLAYRQAVADWYKRRFG--VELDPETEVL 95 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCeEE
Confidence 47899999998875 45566665543111 1246799999999999999999998766 345666 699
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.+|++.+++|.+|++++++++.+ ++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 168 (383)
T TIGR03540 96 SLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFA-GGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLM 168 (383)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhc-CCEEEEEecCcccCCccCHHHHHhhccc------cceEE
Confidence 9999999999999999999999999999999999888877 9999999998666788899999888764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++....++.++.. ..+++++++||||.||
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~--------~~~~~i~~~SfSK~~g 240 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDG--------AKDVGIEFHSLSKTYN 240 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCC--------cccCEEEEEecccccC
Confidence 99999999999999999999999999999999999999998776544455544421 2367899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||++++++ +.+.+..... ...++.+.|.++..++.+. .+++++.++.++++++.+.+.|++.|+++.+
T Consensus 241 ~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 316 (383)
T TIGR03540 241 MTGWRIGMAVGNAD-LIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQRRRDLLLEALKKIGIDVEK 316 (383)
T ss_pred CccceeeEEeCCHH-HHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCEecC
Confidence 99999999999654 4444443332 2346778899999999774 5668888999999999999999999999999
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
+.+|+|+|++++... +..+++.++++++||.|+||+.|+..+++++||+++ .+++++.+++++|++
T Consensus 317 ~~~~~~~~~~l~~~~------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 317 PKATFYVWVPVPEGY------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT-VPDERLEEAVARIKK 382 (383)
T ss_pred CCcceEEEEECCCCC------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec-CCHHHHHHHHHHHhh
Confidence 999999999997532 234678888888899999999997655789999998 488999999988865
No 21
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-50 Score=407.10 Aligned_cols=363 Identities=21% Similarity=0.339 Sum_probs=290.4
Q ss_pred CCCCeeeeeccccc----c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLAENQ----L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
..+++|+|++|++. + +++.+.+++.+.... .....|++..|.++||+++|++++++++ ++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~ 96 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS-----------AKFNSYAPTGGILPARRAIADYLSNDLP--YQLS 96 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCC
Confidence 35579999999986 4 456676766553111 2245698889999999999999988766 4578
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
+++|++|+|+++++..++.+++++||.|+++.|+|+.|...+... |++++.++++.+++|.+|++++++++++
T Consensus 97 ~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------ 169 (409)
T PLN00143 97 PDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFH-HLEIRHFDLLPEKGWEVDLDAVEAIADE------ 169 (409)
T ss_pred HhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHc-CCEEEEEeccCCCCCcCCHHHHHHhccc------
Confidence 999999999999999999999999999999999999999888877 9999999986556889999999987754
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++..+.++..+ . ..+++++++||
T Consensus 170 ~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~-~--------~~~~vi~~~Sf 240 (409)
T PLN00143 170 NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF-A--------SIVPVITLGSI 240 (409)
T ss_pred CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh-c--------ccCcEEEEccc
Confidence 78899999999999999999999999999999999999999999988865443444433 2 33689999999
Q ss_pred ccccCCCcceEEEEEec-CHHH------HHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Q 043923 271 SKDLGLPGFRVGAIYSN-DDMV------VAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~-~~~~------~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
||.|++||+|+||++++ ++.+ .+.+.+... ...++.+.|.++.++|.+.. ..++++.++.++++++.+.+
T Consensus 241 SK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~ 318 (409)
T PLN00143 241 SKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTINILRAALAFCYD 318 (409)
T ss_pred hhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999984 3222 222222222 22357799999999997642 45678888888888899999
Q ss_pred HHHhcCCce--ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHH
Q 043923 343 GLEKAGISC--LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLS 420 (469)
Q Consensus 343 ~L~~~g~~v--~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~ 420 (469)
.|.+++..+ ..|++|+|+|++++..... ...++.+++.++++++||.+.||..|+ .++|+||+++. ++++++++
T Consensus 319 ~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~~-~~~~l~~a 394 (409)
T PLN00143 319 KLKEIPCIMCPQKAEGAFFALVKLNLLLLE-DIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFAV-EQSSLEDG 394 (409)
T ss_pred HHhcCCCCCCCCCCCeeEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEcC-CHHHHHHH
Confidence 998874332 3678999999999742110 111244677788888999999999996 36899999994 89999999
Q ss_pred HHHHHHHHHhhcc
Q 043923 421 MQRLKAFVDSITT 433 (469)
Q Consensus 421 l~~L~~~l~~~~~ 433 (469)
+++|+++++++.+
T Consensus 395 l~rl~~~l~~~~~ 407 (409)
T PLN00143 395 LGRLKSFCGRHAK 407 (409)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999987655
No 22
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.4e-50 Score=408.24 Aligned_cols=365 Identities=22% Similarity=0.367 Sum_probs=298.2
Q ss_pred CCCCeeeeeccccc-----cChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcC----CC
Q 043923 36 NPTGIIQMGLAENQ-----LSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRG----NK 106 (469)
Q Consensus 36 ~~~~~i~L~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~----~~ 106 (469)
+..++|+|+.|.+. .+++.+.+++.+.... .....|++..|.++||++||++++++++ .+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~ 99 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS-----------QECNGYPPTVGSPEAREAVATYWRNSFVHKESLK 99 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCcHHHHHHHHHHHHhhcccccccc
Confidence 55689999999875 3567777777653211 2346799999999999999999987543 13
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 107 VTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 107 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+.+++++|++|+|+++++..++.+++++||.|+++.|+|..+...++.. |++++.+|++.+.+|.+|++++++++++
T Consensus 100 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~-- 176 (412)
T PTZ00433 100 STIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAY-GIEMRFYNCRPEKDWEADLDEIRRLVDD-- 176 (412)
T ss_pred CCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHc-CCEEEEEecCccccCcCCHHHHHHHhcc--
Confidence 4578999999999999999999999999999999999999999988887 9999999997666788999999988765
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|+++|||||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..+.. ..++++
T Consensus 177 ----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---------~~~~i~ 243 (412)
T PTZ00433 177 ----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT---------TVPRVI 243 (412)
T ss_pred ----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC---------CCceEE
Confidence 7899999999999999999999999999999999999999999998776654455555422 235789
Q ss_pred EccCccccCCCcceEEEEEe--cC---HHHHHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYS--ND---DMVVAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKL 340 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~--~~---~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 340 (469)
++||||+||+||+|+||+++ ++ +.+.+.+.+... .+.++.+.|.++..++.+. . +.++++.++.++++++.+
T Consensus 244 ~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 244 LGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-P-QEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred EccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC-c-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997 21 334444444333 3458899999999998764 2 667889999999999999
Q ss_pred HHHHHhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHH
Q 043923 341 VSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 419 (469)
Q Consensus 341 ~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~ 419 (469)
.+.|++. |+.+.+|++|+|+|++++...-. ...++.++++.+++++||.|.||+.|+. ++++||+++. .++++++
T Consensus 322 ~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~l~~ 397 (412)
T PTZ00433 322 YNHIGECIGLSPTMPRGSMFLMSRLDLEKFR-DIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISR-PVEVLRE 397 (412)
T ss_pred HHHHhcCCCCcccCCCeeEEEEEEechhhcC-CCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecC-CHHHHHH
Confidence 9999885 78888899999999998741100 0012346888888778999999999964 6799999985 7899999
Q ss_pred HHHHHHHHHHhhcc
Q 043923 420 SMQRLKAFVDSITT 433 (469)
Q Consensus 420 ~l~~L~~~l~~~~~ 433 (469)
++++|.+++++.+|
T Consensus 398 al~~l~~~~~~~~~ 411 (412)
T PTZ00433 398 AVERIKAFCERHKK 411 (412)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999987764
No 23
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-50 Score=406.92 Aligned_cols=350 Identities=22% Similarity=0.359 Sum_probs=288.3
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.|+|+++ ++.+.+++.+.... .....|++..|.++||+++|++++++++ +.++++ +|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~ii 97 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVED-----------PENHQYPSYEGMLEFRKAVADWYKRRFG--VELDPETEVI 97 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46899999999875 45666666553111 1245799999999999999999998766 346676 599
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|++++|+|..|...++.. |++++.+|++.+.+|.+|++++++.+.+ ++++|
T Consensus 98 ~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 170 (385)
T PRK09276 98 SLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFA-GGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLM 170 (385)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceEE
Confidence 9999999999999999999999999999999999888877 9999999997666788999999887754 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++....++.++.. ..+++|+++||||.||
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~g 242 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPG--------AKDVGIEFHSLSKTYN 242 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCC--------CcCCEEEEecchhhcC
Confidence 99999999999999999999999999999999999999998776544455554421 2367899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||++++++ +.+.+.+.... ..++.+.|.++..++.+. .+++++.++.++++++.+.+.|++.|+++.+
T Consensus 243 ~~GlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 318 (385)
T PRK09276 243 MTGWRIGFAVGNAD-LIAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQERRDILVEGLRKLGLEVEP 318 (385)
T ss_pred CcchhheeeeCCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 99999999999655 44444443322 235668888888888752 5678888999999999999999999998888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
+.+|+|+|++++... +..+++.++++++||.+.||..|+..+++++||+++ .+++++.+++++|++
T Consensus 319 ~~~~~~~~v~~~~~~------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 319 PKATFYVWAPVPKGY------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT-VPDERIEEAVERIKK 384 (385)
T ss_pred CCcceEEEEECCCCC------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHhh
Confidence 899999999998532 234677888878899999999997656789999998 488999999998864
No 24
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-50 Score=405.38 Aligned_cols=349 Identities=19% Similarity=0.379 Sum_probs=288.5
Q ss_pred CCeeeeeccccccCh-HHH-HHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAENQLSF-DLL-ESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.++|||+.|++++++ +.+ .+++.... .....|++..|.++||+++|+++++.++ +.+++++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~ 93 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAK-------------KGHTRYTDSGGDVELIEEIIKYYSKNYD--LSFKRNEIM 93 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHh-------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 367999999998864 333 33333211 2346799999999999999999988776 457899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||.|++++|+|..|...+... |.+++.+|++.+++|.+|++.+++++++ ++++|
T Consensus 94 it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 166 (384)
T PRK06348 94 ATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMV-GGKPIILETYEEDGFQINVKKLEALITS------KTKAI 166 (384)
T ss_pred EcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEecCCcCcCCcCCHHHHHHhhCc------CccEE
Confidence 9999999999999999999999999999999999999887 9999999986556788999999988764 78899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++||||||.++|.+++++|+++|++|+++||+||+|.++.|+.. ..++.++.. ..+++++++||||+||
T Consensus 167 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~--------~~~~vi~~~SfSK~~~ 237 (384)
T PRK06348 167 ILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAG--------MPERTITFGSFSKDFA 237 (384)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCC--------CcCcEEEEecchhccC
Confidence 9999999999999999999999999999999999999999877642 334444421 2478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL 352 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~ 352 (469)
+||+|+||+++++. +.+.+..... .++++++.|.++..++... ++++++.++.++++++.+.+.|+++ ++++.
T Consensus 238 l~GlRiG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 313 (384)
T PRK06348 238 MTGWRIGYVIAPDY-IIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKRLEYAYKRIESIPNLSLH 313 (384)
T ss_pred CccccceeeecCHH-HHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 99999999999654 4444444432 2457889999999998753 5667888999999999999999887 67888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++++|+|+|++++... .++.+++..+++++||.|.||+.|+..+++++||+++ .+++++++++++|+++
T Consensus 314 ~p~gg~~~~~~~~~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 314 PPKGSIYAFINIKKTG-----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT-VGIEVLEEAFNRIEKM 382 (384)
T ss_pred cCCeeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec-CCHHHHHHHHHHHHhh
Confidence 8999999999997311 1234678888878899999999998666789999998 5899999999999764
No 25
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.4e-50 Score=408.21 Aligned_cols=362 Identities=22% Similarity=0.364 Sum_probs=295.4
Q ss_pred CCCeeeeeccccc----cC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAENQ----LS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~n~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
..++|+|+.|++. ++ ++.+.+++.+.... .....|++..|.++||+++|+++++.++ +++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 117 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRS-----------GKYNSYSTCVGLLPARRAIAEYLSRDLP--YELST 117 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHc-----------CcCCCCCCCccCHHHHHHHHHHHhhccC--CCCCh
Confidence 4479999999874 32 35566655542110 2245799989999999999999987766 45789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
++|++|+|+++||.+++.++.++||+|+++.|+|+.|...+... |++++.+++.++.+|.+|++.+++.+++ +
T Consensus 118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 190 (430)
T PLN00145 118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFS-GLEVRHFDLLPERGWEVDLEGVEALADE------N 190 (430)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeeCCcccCCcCCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999998888777 9999999987667899999999988765 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+. ...++|+++|||
T Consensus 191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~---------~~~~vi~~~S~S 261 (430)
T PLN00145 191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG---------EVAPVLTLGSIS 261 (430)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc---------ccCcEEEEeccc
Confidence 89999999999999999999999999999999999999999999888765555655442 336899999999
Q ss_pred cccCCCcceEEEEEec-CHHHH------HHHHHhcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043923 272 KDLGLPGFRVGAIYSN-DDMVV------AAATKMSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSG 343 (469)
Q Consensus 272 K~~g~~GlRiG~li~~-~~~~~------~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 343 (469)
|.|++||+|+||++++ +..+. ..+......+ .++.+.|.++..+|+... ++++++.++.++++++.+.+.
T Consensus 262 K~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 339 (430)
T PLN00145 262 KRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKETADICYEK 339 (430)
T ss_pred cccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999974 22221 2233333322 357899999999998642 567888999999999999999
Q ss_pred HHhc-CCce-ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 043923 344 LEKA-GISC-LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 421 (469)
Q Consensus 344 L~~~-g~~v-~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l 421 (469)
|+++ ++.+ ..|++|+|+|++++..... ...++.+++.++++++||.+.||..|+. ++|+||+++. +++.+++++
T Consensus 340 L~~~~g~~~~~~P~ga~y~~v~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~-~~~~l~~al 415 (430)
T PLN00145 340 IKEIKCITCPHKPEGSMFVMVKLDLSCLS-GIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAI-DPPSLEDGL 415 (430)
T ss_pred HhcCCCCCCCcCCCeeeEEEeccChhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHH
Confidence 9987 7775 4789999999998742110 1113456888899999999999999974 6899999994 899999999
Q ss_pred HHHHHHHHhhcc
Q 043923 422 QRLKAFVDSITT 433 (469)
Q Consensus 422 ~~L~~~l~~~~~ 433 (469)
++|++++.+++|
T Consensus 416 ~rl~~~~~~~~~ 427 (430)
T PLN00145 416 ERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHhcc
Confidence 999999998887
No 26
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=4.8e-50 Score=406.57 Aligned_cols=368 Identities=21% Similarity=0.359 Sum_probs=297.7
Q ss_pred CCCCCCCCCeeeeeccccc----c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCC
Q 043923 31 YDEVQNPTGIIQMGLAENQ----L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGN 105 (469)
Q Consensus 31 ~~~~~~~~~~i~L~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~ 105 (469)
.....++.++|+|++|++. + +++.+.+++.+.... .....|++..|.++||+++++++++.++
T Consensus 24 ~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g- 91 (409)
T PLN02656 24 IDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQS-----------NKFNGYAPTVGLPQARRAIAEYLSRDLP- 91 (409)
T ss_pred ccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHHhcC-
Confidence 3344567799999999986 3 356666666553110 2346798889999999999999998766
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 106 KVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 106 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+.+++++|++|+|+++++..++.+++++||.|++++|+|+.|...+... |++++.+|++.+.+|.+|++.+++.+++
T Consensus 92 -~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~- 168 (409)
T PLN02656 92 -YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFR-HLEVRYVDLLPEKGWEVDLDAVEALADQ- 168 (409)
T ss_pred -CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHc-CCEEEEEeCCCcCCCCCCHHHHHHHhcc-
Confidence 4578999999999999999999999999999999999999998777777 9999999987556788999999988764
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++..+ . ...++|
T Consensus 169 -----~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~--------~~~~vi 234 (409)
T PLN02656 169 -----NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF-G--------SIVPVL 234 (409)
T ss_pred -----CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh-c--------ccCcEE
Confidence 78899999999999999999999999999999999999999999988876544454444 1 336899
Q ss_pred EEccCccccCCCcceEEEEEecC-------HHHHHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSND-------DMVVAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRH 337 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~-------~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 337 (469)
+++||||+|++||+|+||+++++ +.+.+.+.+... ...++.+.|.++..+|++.. ..++++.++.+++++
T Consensus 235 ~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~r 312 (409)
T PLN02656 235 TLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTINILKQSS 312 (409)
T ss_pred EEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHH
Confidence 99999999999999999999953 345554544433 33478899999999997632 567888899999999
Q ss_pred HHHHHHHHhcC-Cc-eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHH
Q 043923 338 RKLVSGLEKAG-IS-CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSED 415 (469)
Q Consensus 338 ~~l~~~L~~~g-~~-v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e 415 (469)
+.+.+.|++++ +. +.+|++|+|+|++++..... ...++.+++..+++++||.+.||+.|+. ++|+||+++. +++
T Consensus 313 ~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~~~-~~e 388 (409)
T PLN02656 313 DICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITFAA-DPS 388 (409)
T ss_pred HHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEeCC-CHH
Confidence 99999999873 33 35788999999999742111 0012335666777888999999999963 6899999995 899
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 043923 416 TLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 416 ~i~~~l~~L~~~l~~~~~ 433 (469)
++++++++|++++.++..
T Consensus 389 ~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 389 SLEEALGRIKSFYLRHSK 406 (409)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999986654
No 27
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.8e-50 Score=406.29 Aligned_cols=354 Identities=21% Similarity=0.411 Sum_probs=292.2
Q ss_pred CCeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.|+|++++ +.+.+++.+... .....|++..|.++||+++|++++++++ +.++++ +|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 85 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE------------QGYTSYTANAGLLELRQEIAKYLKKRFA--VSYDPNDEII 85 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 478999999998854 445555544211 1245698888999999999999998876 346675 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+.+++.+++++||.|++++|+|+.|...+... |.+++.++.+.+++|.+|++++++++.+ +++++
T Consensus 86 ~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 158 (378)
T PRK07682 86 VTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLA-GGVPVPVATTLENEFKVQPAQIEAAITA------KTKAI 158 (378)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCCCCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999999888877 9999999987556788999999998764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++. +.++..+.+ ..+++++++||||.||
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~--------~~~~~i~~~S~SK~~~ 229 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKG--------MRERTILISGFSKGFA 229 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhccc--------ccCCEEEEecCccccc
Confidence 9999999999999999999999999999999999999999877653 334444422 3468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||++++++ +.+.+.... ..++++.+.|.++..+|++.. .++++.++.++++++.+.+.|+++|+++.+
T Consensus 230 ~~GlR~G~~~~~~~-~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 305 (378)
T PRK07682 230 MTGWRLGFIAAPVY-FSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRKRRNFFVTSFNEIGLTCHV 305 (378)
T ss_pred ChhhhhhhhhcCHH-HHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 99999999999655 444443332 224478899999999998752 347888899999999999999999999889
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|++|+|+|+.++... .+..+++..+++++||.+.||..|+...++++||+++. +++++++++++|++++++.
T Consensus 306 p~g~~~~~~~~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 306 PGGAFYAFPSISSTG-----LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCeeEEEEEeccCCC-----CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 999999999885311 12346778888788999999999976567899999996 8999999999999998754
No 28
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.4e-50 Score=404.21 Aligned_cols=354 Identities=19% Similarity=0.337 Sum_probs=286.0
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
..++|+|+.|+|+++ ++.+.+++++. ......|+++.|.++||+++|++++++++.+..++++ +|
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i 93 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALREN-------------LHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHV 93 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHH-------------hhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceE
Confidence 357899999999985 56677777653 1335679999999999999999998887643236775 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCE--EEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 115 VLTAGATSANETLMFCLAEPGEA--FLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~--Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
++|+|+++++..++.+++++||. |++++|+|..|...+... |++++.+|++++++|.+|++++++++.+ ++
T Consensus 94 ~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~ 166 (393)
T TIGR03538 94 LPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLA-GAEPYFLNCTAENGFLPDFDAVPESVWR------RC 166 (393)
T ss_pred EECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhc-CCeEEEeeccccCCCCCCHHHHHHHHhh------cc
Confidence 99999999999999999999986 999999999999888877 9999999998777899999999988765 78
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC-CccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
++|+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...+........ +.+..+++|+++|||
T Consensus 167 k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~---~~~~~~~vi~i~S~S 243 (393)
T TIGR03538 167 QLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQL---GRDDFRRCLVFHSLS 243 (393)
T ss_pred eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccc---cccccccEEEEecch
Confidence 9999999999999999999999999999999999999999998776532 223322221110 001347899999999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
|.|++||+|+||++++++.+ +.+.+... .+.++++.|.++.+.+.+ .+++++.++.++++++.+.+.|+++ +
T Consensus 244 K~~~~~GlRvG~~i~~~~l~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~-~ 317 (393)
T TIGR03538 244 KRSNLPGLRSGFVAGDAEIL-KAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRALYREKFAAVLEILGQV-L 317 (393)
T ss_pred hhcCCcccceEEEecCHHHH-HHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 99999999999999965544 44443332 234778899988888754 3457888999999999999999876 5
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeecCCHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANMSEDTLKLSMQR 423 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~~~~e~i~~~l~~ 423 (469)
.+..+.+|+|+|++++. ++.+++.++++++||.|.||+.|+. .+.+++||+++. +++++++++++
T Consensus 318 ~~~~p~gg~f~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~ 388 (393)
T TIGR03538 318 DLELPDAGFYLWPKVPG--------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAER 388 (393)
T ss_pred cccCCCeeEEEEEECCC--------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHH
Confidence 66778999999999971 1236778888888999999998863 235799999985 89999999999
Q ss_pred HHHHH
Q 043923 424 LKAFV 428 (469)
Q Consensus 424 L~~~l 428 (469)
|++++
T Consensus 389 l~~~~ 393 (393)
T TIGR03538 389 IRSFI 393 (393)
T ss_pred HHHhC
Confidence 98753
No 29
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.6e-49 Score=410.78 Aligned_cols=381 Identities=20% Similarity=0.324 Sum_probs=297.3
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+++|+|+.+.+.+|.+.+..+.+..... .+ .....|++..|.++||++||+++.+++| +++++++|++|
T Consensus 129 p~~i~~~~~~~~fp~~~i~~a~~~l~~~-----~~----~~~~~Y~~s~G~~~lReaIA~~~~~r~g--~~~~pe~I~iT 197 (534)
T PLN02231 129 PSLLDKSETHGLFSADAIERAWQILDQI-----PG----RATGAYSHSQGIKGLRDAIAAGIEARDG--FPADPNDIFLT 197 (534)
T ss_pred CccCCCCCccccCCHHHHHHHHHHHHhc-----CC----ccccCcCCCCCcHHHHHHHHHHHHhccC--CCCCcccEEEe
Confidence 4678888777777877666665432110 00 2356799999999999999999988766 56789999999
Q ss_pred CChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 118 AGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 118 ~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+|+++|+..++++++ .+||.|+++.|+|+.|...+... |.++++++++++++|.+|+++|++++++....+.++++++
T Consensus 198 ~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~-g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 198 DGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALH-GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHc-CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999999999998 48999999999999999999887 9999999998777899999999999976544445789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC-CCCccchhhhhhccccccCCcCCeEEEEccCcccc-
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS-SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL- 274 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~- 274 (469)
++|||||||.++|.+++++|+++|++||++||+||+|.++.|+ +..+.++.++..+++. .....++++++||||.|
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~--~~~~~~vi~l~S~SK~~~ 354 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGY--GEKDISLVSFQSVSKGYY 354 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhcc--ccCCceEEEEeccCcccc
Confidence 9999999999999999999999999999999999999999885 3455676665331100 00113689999999976
Q ss_pred CCCcceEEEEEec--CHHHHHHHHHhccc-ccCcHHHHHHHHHHhcCc-----hhhHHH---HHHHHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYSN--DDMVVAAATKMSSF-GLVSSQTQYLLSALLSDK-----KFTQNY---ISENKKRLKQRHRKLVSG 343 (469)
Q Consensus 275 g~~GlRiG~li~~--~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~-----~~~~~~---~~~~~~~l~~~~~~l~~~ 343 (469)
|+||+|+||++++ ++.+.+.+.+.... .+.+.+.|.++..++... .+ ..+ .+..++.++++++.+.+.
T Consensus 355 g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y-~~~~~~~~~i~~~~~~r~~~l~~~ 433 (534)
T PLN02231 355 GECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESY-ESYMAEKDGILSSLARRAKTLEDA 433 (534)
T ss_pred cCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999873 45555555444332 235667888888888642 33 343 345578999999999999
Q ss_pred HHhc-CCceecCCceEEEEEec--ccc-cccC---ChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHH
Q 043923 344 LEKA-GISCLKSNAGLFCWVDM--RHL-LRSN---TFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSED 415 (469)
Q Consensus 344 L~~~-g~~v~~~~~g~~~~v~~--~~~-~~~~---~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e 415 (469)
|+++ |+++.+|+||||+|+++ +.. .... ....+..++.++++++||.+.||+.|+.. +..++|+++. .+++
T Consensus 434 L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e 512 (534)
T PLN02231 434 LNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQED 512 (534)
T ss_pred HhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHH
Confidence 9988 89999999999999555 321 0000 00123346788888899999999999863 3557999997 4899
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 043923 416 TLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 416 ~i~~~l~~L~~~l~~~~~~ 434 (469)
++++++++|++++++.-++
T Consensus 513 ~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 513 KIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998877653
No 30
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-49 Score=402.72 Aligned_cols=350 Identities=21% Similarity=0.340 Sum_probs=283.9
Q ss_pred CCeeeeeccccccCh-H-HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 38 TGIIQMGLAENQLSF-D-LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
.++|+|+.+.+..++ + .+....+.... .....|++..|.++||+++|+|++++++ ++++++ +|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~i 100 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALAD------------PQNHGYPPFEGTASFRQAITDWYHRRYG--VELDPDSEA 100 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhC------------CCCccCCCCCCCHHHHHHHHHHHHHHHC--CCcCCCCeE
Confidence 468999988655443 3 33333332210 2246799999999999999999988766 446787 48
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||+|++++|+|+.+...+... |++++.+|++.+++|.+|++++++.+++ ++++
T Consensus 101 ~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 173 (394)
T PRK05942 101 LPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIA-GAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKI 173 (394)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEeecCCccCCccCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999998888776 9999999998767889999999988764 8899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++|||||||.++|.+++++|+++|++||++||+||+|.++.+++....++.++.. ..+.+++++||||.|
T Consensus 174 i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~SfSK~~ 245 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG--------AKDIGVEFHTLSKTY 245 (394)
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC--------ccccEEEEecchhcc
Confidence 999999999999999999999999999999999999999988776544445444421 235678899999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|+||+|+||+++++. +.+.+..... .+++++++|.++..+++.. .+++++.++.++++++.+.+.|++.|+++.
T Consensus 246 ~~~GlRiG~i~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 321 (394)
T PRK05942 246 NMAGWRVGFVVGNRH-IIQGLRTLKTNLDYGIFSALQKAAETALQLP---DSYLQQVQERYRTRRDFLIQGLGELGWNIP 321 (394)
T ss_pred CChhhheeeeecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCeec
Confidence 999999999999654 4455544432 2347788999999998642 567888899999999999999998899888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++++|+|+|++++.... +.+++.++++++||.|.||+.|+..+++|+||+++. +.+.+.+++++|.++
T Consensus 322 ~~~~~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 322 PTKATMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred CCCeeeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 89999999999985321 235677788889999999999976567899999984 778888888887664
No 31
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=5.8e-50 Score=406.32 Aligned_cols=352 Identities=20% Similarity=0.289 Sum_probs=280.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|+++++ ++.+.+++.+...... .......|++..|.++||+++|+++.+.++ +++++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~ 103 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMG-------TAETFRGYGPEQGYDFLREKIAENDYQARG--CDISADEIF 103 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhccc-------ccCCccCCCCCCCCHHHHHHHHHHHHHhcC--CcCChhhEE
Confidence 447899999999985 4555665554311100 002356798889999999999999877766 457899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCE-----------EEEeeccCCCCcccCHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVE-----------IVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+|+|+++++..++ .++.+||+|++++|+|..|...++.. |++ ++++|++.+++|.+|++.
T Consensus 104 it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------- 174 (409)
T PRK07590 104 ISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMA-GRTGEANEDGRYSGIVYLPCTAENNFVPELPE------- 174 (409)
T ss_pred ECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCcccccccccccceeEeecccccCCcccCcc-------
Confidence 9999999999875 55689999999999999999998887 886 899998766667666432
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
+++++|++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++....++.++.. ..+++
T Consensus 175 -----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~--------~~~~v 241 (409)
T PRK07590 175 -----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEG--------ARECA 241 (409)
T ss_pred -----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCC--------cccce
Confidence 27899999999999999999999999999999999999999999997665543344444311 23579
Q ss_pred EEEccCccccCCCcceEEEEEecCHHHHH-----------HHHH-hc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVA-----------AATK-MS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKK 331 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~~~~~~~-----------~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 331 (469)
|+++||||+||+||+|+||++++++.+.. .... .. .+..++.+.|.++..++.+.. .+++++.++
T Consensus 242 i~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~ 319 (409)
T PRK07590 242 IEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG--KAQIKELID 319 (409)
T ss_pred EEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc--HHHHHHHHH
Confidence 99999999999999999999997665531 1111 11 233478899999988887542 467888899
Q ss_pred HHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 332 RLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 332 ~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
.++++++.+.+.|+++|+++.++.+|+|+|++++... ++.+++..+++++||.+.||+.|+..+.+++||++.
T Consensus 320 ~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~- 392 (409)
T PRK07590 320 YYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGM------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF- 392 (409)
T ss_pred HHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCC------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc-
Confidence 9999999999999999988888889999999998532 223577888888899999999997666789999975
Q ss_pred CCHHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l 428 (469)
.+++++++++++|++++
T Consensus 393 ~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 393 GSRENVLEAMERIKKAL 409 (409)
T ss_pred CCHHHHHHHHHHHHhhC
Confidence 38999999999998753
No 32
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-49 Score=402.53 Aligned_cols=354 Identities=19% Similarity=0.370 Sum_probs=296.6
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|++.++ ++.+.+++++... .....|.+..|.++||+++|+++++.++ +.+++++|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 98 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD------------EGWTHYTPNAGIPELREAIAEYYKKFYG--VDVDVDNVIV 98 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEEE
Confidence 46899999999985 4556666655311 1244688888999999999999987766 4478999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|..+...+... |++++.+|++.+++|.+|++++++.+++ ++++++
T Consensus 99 t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~ 171 (391)
T PRK08361 99 TAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIA-EAKPIRIPLREENEFQPDPDELLELITK------RTRMIV 171 (391)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------ccEEEE
Confidence 999999999999999999999999999999999888877 9999999998777888999999998875 788999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++||+||||.++|.+++++|+++|++++++||+||+|.++.+++....++.+. ..+++++++||||+||+
T Consensus 172 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~----------~~~~~i~~~s~SK~~~~ 241 (391)
T PRK08361 172 INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKY----------APDNTILANSFSKTFAM 241 (391)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhc----------CCCCEEEEecCchhcCC
Confidence 99999999999999999999999999999999999999887765444454443 33689999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
+|+|+||++++++.+. .+..... .+.++++.|.++..+|.+..+ .+++++.++.++++++.+.+.|+++ ++++.+
T Consensus 242 ~GlRiG~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 319 (391)
T PRK08361 242 TGWRLGFVIAPEQVIK-DMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFE 319 (391)
T ss_pred cHhhhhhhccCHHHHH-HHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecC
Confidence 9999999999655444 3333332 345788999999999988655 5678899999999999999999987 888899
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+++|+|+|++++... .+..+++..+++++||.|.||..|+..+++++||+++. +++++++++++|++++++
T Consensus 320 p~g~~~~~~~l~~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 320 PKGAFYVFANIDETG-----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCEEEEEEEECCCCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 999999999997311 12346777787778999999999987667899999995 888999999999998864
No 33
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=7.1e-49 Score=396.05 Aligned_cols=358 Identities=25% Similarity=0.442 Sum_probs=292.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC-CCcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD-TSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~ 115 (469)
.++|+|+.|.++++ ++.+.+++.+... .....|++..|.++||+++++++++.++ +.++ +++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 95 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAID------------ANQSHYTGMAGLLELRQAAADFVKEKYN--LDYAPENEIL 95 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46899999999985 4556666654211 1234698889999999999999988766 3344 47999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++.+++.+++++||+|++++|+|..+...++.. |++++.++.++ .+|.+|++.+++++++. ..+++++
T Consensus 96 it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~i 170 (391)
T PRK07309 96 VTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLV-GAEIVEIDTTE-NDFVLTPEMLEKAILEQ---GDKLKAV 170 (391)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhhcc---CCCeEEE
Confidence 9999999999999999999999999999999999888877 99999999864 46789999999888631 1268999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++|++++|+||+|+++.|++..+.++.++ ..+++++++||||+||
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~----------~~~~~i~~~S~SK~~g 240 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY----------LPDQTILINGLSKSHA 240 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh----------ccCCEEEEecChhhcc
Confidence 999999999999999999999999999999999999999988865544565554 2378999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
+||+|+||++++++.+........ ...+++.+.|.++..++++..+ +....++.++++++++.+.|+++|+++.++
T Consensus 241 ~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p 317 (391)
T PRK07309 241 MTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKRRDYIIEKMTDLGFKIIKP 317 (391)
T ss_pred CccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 999999999997665444332222 2234788899999999987543 235567788899999999999999999999
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+|+|+|++++.... .++.+++.++++++||.|.||..|+..+++++||+++. +++++++++++|+++++++.
T Consensus 318 ~gg~~~~~~l~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 318 DGAFYIFAKIPAGYN----QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CeeEEEEEECCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 999999999875321 12346777778788999999999987677899999985 88999999999999997653
No 34
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=2.8e-49 Score=398.04 Aligned_cols=349 Identities=19% Similarity=0.314 Sum_probs=285.1
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~ 115 (469)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.++||+++++++++.+| +.+++ ++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~ 94 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMR------------DGHNQYAPMAGIAALREALAEKTERLYG--ARYDPASEVT 94 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHH------------hCCCCcCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 36899999999886 4556666654211 1235799999999999999999988776 33444 6899
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++++++++||+|++++|+|..+...+... |.+++.++++. ++|.+|++.+++++++ ++++|
T Consensus 95 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 166 (384)
T PRK12414 95 VIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQ-GATPVAIKLSP-EDFRVNWDEVAAAITP------RTRMI 166 (384)
T ss_pred EECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHc-CCEEEEEecCc-cccccCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999998888887 99999999874 4578999999988764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++....++..+.. ..+++++++||||.||
T Consensus 167 ~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~SfSK~~~ 238 (384)
T PRK12414 167 IVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE--------LAERSVIVSSFGKSYH 238 (384)
T ss_pred EEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC--------ccCcEEEEeccccccc
Confidence 99999999999999999999999999999999999999998887644344433311 2468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||++++++.+ +.+.... ..++++.+.|.++..+|.+..+ ..+.++.++++++.+.+.|++.|+++.+
T Consensus 239 ~pGlRiG~~v~~~~l~-~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~ 313 (384)
T PRK12414 239 VTGWRVGYCLAPAELM-DEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRKRDLLARELAGSRFELLP 313 (384)
T ss_pred CccceEEEEecCHHHH-HHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHHhCCCeecC
Confidence 9999999999965544 4444443 2345788999999999987643 2356778899999999999999999999
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC--CCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE--PGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~--~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
+.+|+|+|++++.... ..+.+++..+++++||.+.||+.|+..+ .+++||+++. +++++++++++|.+
T Consensus 314 ~~gg~~~~~~~~~~~~----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 314 SEGSFFMLARFRHFSD----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred CCcceEEEEcccccCC----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999998874211 1233567777888999999999886432 5799999996 89999999999975
No 35
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-49 Score=399.19 Aligned_cols=360 Identities=22% Similarity=0.401 Sum_probs=297.0
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|.+.++ ++.+.+++.+... .....|++..|.++||++++++++++++ +.+++++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~ 97 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIE------------RGETKYTLVNGTPALRKAIIAKLERRNG--LHYADNEIT 97 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 347899999998876 4556666655311 1235799999999999999999988776 446789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||+|++++|+|..|...+... |..++.++++.+++|.+|++++++++.+ +++++
T Consensus 98 ~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v 170 (402)
T PRK06107 98 VGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLAN-DGTPVIVACPEEQGFKLTPEALEAAITP------RTRWL 170 (402)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHhhcCc------CceEE
Confidence 9999999999999999999999999999999998887776 8888888887566788999999988754 78899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhc-CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEK-NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~-~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++||+||||.++|.+++++|+++|++| +++||+||+|.++.|++..+.++..+.++ ..+++++++||||.|
T Consensus 171 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~-------~~~~vi~~~S~SK~~ 243 (402)
T PRK06107 171 ILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE-------LRDRVLVTNGVSKTY 243 (402)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC-------ccCCEEEEeccchhh
Confidence 9999999999999999999999999998 99999999999887876555666655331 236899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v 351 (469)
|+||+|+||++++++ +.+.+..... .++++.+.|.++..+|++. .++++..++.++++++.+.+.|+++ |+++
T Consensus 244 ~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~ 319 (402)
T PRK06107 244 AMTGWRIGYAAGPAD-LIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQRRDYALALLNAIPGLSC 319 (402)
T ss_pred cCcccceeeeecCHH-HHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999655 4444444432 3458899999999999754 4568888999999999999999987 8888
Q ss_pred ecCCceEEEEEecccccc-----cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 352 LKSNAGLFCWVDMRHLLR-----SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~-----~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
.++++|+|+|++++.... .....++.+++.++++++||.++||+.|+. ++|+||+++. +++++++++++|++
T Consensus 320 ~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~-~~e~l~~~l~~l~~ 396 (402)
T PRK06107 320 LVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIAT-SLETLEEACARIER 396 (402)
T ss_pred cCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHHHHH
Confidence 899999999999853211 101123456788888889999999999964 6799999995 89999999999999
Q ss_pred HHHhh
Q 043923 427 FVDSI 431 (469)
Q Consensus 427 ~l~~~ 431 (469)
++++.
T Consensus 397 ~l~~~ 401 (402)
T PRK06107 397 AVAAL 401 (402)
T ss_pred HHHhc
Confidence 98764
No 36
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-49 Score=396.19 Aligned_cols=352 Identities=21% Similarity=0.401 Sum_probs=292.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ +.+++++|++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~la~~~~~~~~--~~~~~~~i~~ 89 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALA------------DGETFYTHNLGIPELREALARYVSRLHG--VATPPERIAV 89 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcCcceEEE
Confidence 47899999999986 5667777665311 1224599989999999999999988766 4478999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC-CCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS-LNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++||.|++++|+|..+...+... |++++.+|++. .++|.+|++++++.+++ +++++
T Consensus 90 t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i 162 (382)
T PRK06108 90 TSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKIL-GARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRAL 162 (382)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHC-CCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999999888877 99999999974 34688999999988764 78899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC-CCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS-SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++||||||.++|.+++++|+++|+++|++||+||+|.++.++ +....++..+.. ..+++++++||||.|
T Consensus 163 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~ 234 (382)
T PRK06108 163 FINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE--------PDDRIIFVNSFSKNW 234 (382)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC--------CcCCEEEEeechhhc
Confidence 99999999999999999999999999999999999999998776 333344444422 336899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v 351 (469)
|++|+|+||+++++..+ +.+..... ..+++.+.|.++..+|.+. .+++++.+++++++++.+.+.|+++ |+++
T Consensus 235 g~~G~RiG~~~~~~~~~-~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (382)
T PRK06108 235 AMTGWRLGWLVAPPALG-QVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRRSRDHLVDALRALPGVEV 310 (382)
T ss_pred cCcccceeeeeCCHHHH-HHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999965544 44433322 2346788999999999764 3457888889999999999999887 8888
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.++++|+|+|++++... +..+++.++++++||.+.||+.|+...++++|++++. +++++++++++|+++++
T Consensus 311 ~~p~~g~~~~~~l~~~~------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 311 AKPDGAMYAFFRIPGVT------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred cCCCeeEEEEEeCCCCC------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 88999999999997532 2346788888888999999999976567899999997 99999999999999875
No 37
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-49 Score=395.48 Aligned_cols=350 Identities=21% Similarity=0.356 Sum_probs=290.1
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ +.+++++|++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~i 97 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALA------------AGHTRYTAARGLPALREAIAGFYAQRYG--VDVDPERILV 97 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCccCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 46899999999975 5666666665311 1234688889999999999999988776 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+|++.+++|.+|++.+++.+++ ++++++
T Consensus 98 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~ 170 (387)
T PRK08960 98 TPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLV-EGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGAL 170 (387)
T ss_pred ccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEE
Confidence 999999999999999999999999999999999888877 9999999998777889999999988765 678899
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++||||||.++|.+++++|+++|++||++||+||+|.++.|+.. ..++.. ..+++++++||||+||+
T Consensus 171 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~-----------~~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 171 VASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLE-----------VDDDAFVLNSFSKYFGM 238 (387)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhh-----------ccCCEEEEeecccccCC
Confidence 999999999999999999999999999999999999998777543 234332 23689999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce-ec
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC-LK 353 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v-~~ 353 (469)
+|+|+||++++++ +.+.+..... ..+++.+.|.++.+++.+. . .+++++.++.++++++.+.+.|+++|+.+ ..
T Consensus 239 ~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (387)
T PRK08960 239 TGWRLGWLVAPPA-AVPELEKLAQNLYISASTPAQHAALACFEPE-T-LAILEARRAEFARRRDFLLPALRELGFGIAVE 315 (387)
T ss_pred cccEEEEEEcCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHhhcC-c-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcC
Confidence 9999999999655 4444444433 2346889999999998753 3 67788899999999999999999988765 46
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
|.+|+|+|++++... .++.+++.++++++||.|.||+.|+.. ..+|+||+++. +.+.+.+++++|+++++
T Consensus 316 p~g~~f~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 316 PQGAFYLYADISAFG-----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred CCeeEEEEEeccccC-----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 788999999997521 123467788888889999999999753 35699999996 88999999999998775
No 38
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1e-48 Score=396.51 Aligned_cols=358 Identities=20% Similarity=0.329 Sum_probs=290.4
Q ss_pred CCeeeeeccccc----c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 38 TGIIQMGLAENQ----L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 38 ~~~i~L~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
.++|+|+.|++. + +++.+.+++.+.... .....|++..|.++||+++|+++++. + ..++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~-~--~~~~~~ 96 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS-----------GKYNGYAPTVGALSAREAIASYYHNP-D--GPIEAD 96 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc-----------cCCCCCCCCCCCHHHHHHHHHHHhhc-C--CCCCHH
Confidence 478999999874 4 455666666553111 12356988899999999999999864 3 347899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|++|+|+++++.+++.+++++||+|++++|+|..|...+... |++++.++++.+++|.+|++.+++++++ ++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~-g~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESM-GIEVKLYNLLPDKSWEIDLKQLESLIDE------KT 169 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHHhcc------Cc
Confidence 9999999999999999999999999999999999999888887 9999999987666788999999988764 67
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.+ ..++|+++||||
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---------~~~vi~~~SfSK 240 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS---------TVPILSCGGLAK 240 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC---------CCcEEEEccCcc
Confidence 89999999999999999999999999999999999999999998776655556555522 235899999999
Q ss_pred ccCCCcceEEEEEecCH-----HHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 273 DLGLPGFRVGAIYSNDD-----MVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~-----~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
+|++||+|+||+++++. .+.+.+.... ..+.++++.|.++..+|.+. . ++++++.++.++++++.+.+.|++
T Consensus 241 ~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~r~~l~~~L~~ 318 (401)
T TIGR01264 241 RWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT-P-QEYFDGTLSVLESNAMLCYGALAA 318 (401)
T ss_pred cCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC-c-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998742 2223333332 23457889999999999763 2 677889999999999999999998
Q ss_pred c-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 347 A-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 347 ~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
+ |+.+..|.+|+|+|++++...... ..++.+++..+++++||.|.||+.|+. ++++||+++. +++++++++++|.
T Consensus 319 ~~~~~~~~p~~g~f~~~~~~~~~~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~--~~~iRis~~~-~~~~l~~~l~rl~ 394 (401)
T TIGR01264 319 VPGLRPVMPSGAMYMMVGIEMEHFPE-FKNDVEFTERLVAEQSVFCLPGSCFEY--PGFFRVVLTV-PVVMMEEACSRIQ 394 (401)
T ss_pred CCCCcccCCCeeeEEEEEecccccCC-CCCHHHHHHHHHHhCCEEEeCchhcCC--CCeEEEEEcC-CHHHHHHHHHHHH
Confidence 8 788778899999999986420000 012346788888788999999998863 6899999995 7899999999999
Q ss_pred HHHHhh
Q 043923 426 AFVDSI 431 (469)
Q Consensus 426 ~~l~~~ 431 (469)
+++++.
T Consensus 395 ~~~~~~ 400 (401)
T TIGR01264 395 EFCERH 400 (401)
T ss_pred HHHhcc
Confidence 998753
No 39
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.1e-48 Score=389.19 Aligned_cols=341 Identities=21% Similarity=0.340 Sum_probs=281.8
Q ss_pred eeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEEEe
Q 043923 40 IIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIVLT 117 (469)
Q Consensus 40 ~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~t 117 (469)
+++|+.+.+.++ ++.+.+++++.. .....|+++.|.++||+++++++++++| ++++++ +|++|
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~Iiit 66 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAV-------------PEVSQYPSALGTKALREAISGWFERRFG--VKLDPDAQVLPS 66 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHH-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEEc
Confidence 689999988876 566777776531 2356799999999999999999988877 457787 99999
Q ss_pred CChHHHHHHHHHHhcCCC---CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 118 AGATSANETLMFCLAEPG---EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~g---d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+++++..++.+++++| |.|+++.|+|..|...++.. |++++.++++.+++|.+|++++++++++ ++++
T Consensus 67 ~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~ 139 (350)
T TIGR03537 67 AGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFA-GGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKI 139 (350)
T ss_pred CChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhc-CCEEEEcccCcccCCccCHHHHHHhhhh------ccEE
Confidence 999999999999999887 69999999999999999887 9999999997667888999999998875 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++++||||||.+++.+++++|+++|++||++||+||+|.++.++. ...++... ..+++++++|+||++
T Consensus 140 i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~----------~~~~~i~~~s~SK~~ 208 (350)
T TIGR03537 140 VWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEV----------GIENVLAFHSLSKRS 208 (350)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhc----------CcCCEEEEeeccccc
Confidence 9999999999999999999999999999999999999999876654 23343333 337899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccc--cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|++|+|+||+++++. +.+.+......+ ..+.+.|.++.+.+.+.. ++++.++.++++++.+.+.|++.|+++.
T Consensus 209 g~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~r~~l~~~~~~~~~~l~~~g~~~~ 283 (350)
T TIGR03537 209 GMTGYRSGFVAGDEK-LISFLRKLRANFGVASPDFVQAAAKAAWSDDN----HVLERRKIFKRKRDLFIEFFNKVGLEYL 283 (350)
T ss_pred CCccccceeeecCHH-HHHHHHHHHHhhccCCCHHHHHHHHHHhCCcH----HHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 999999999998544 444444443222 244467887777776543 4677888999999999999999999988
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
++.+|+|+|++++... +..++++.|+ ++||.|.||..|+...++++||+++ .+++++++++++|++
T Consensus 284 ~~~g~~~~~~~~~~~~------~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 284 YPDATFYLWVKVPSGI------DAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred CCCeEEEEEEECCCCC------CHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 9999999999998532 2336777776 4699999999997655789999997 589999999999875
No 40
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-48 Score=394.45 Aligned_cols=355 Identities=22% Similarity=0.368 Sum_probs=287.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.|.+..+ ++.+.+.+.+.. ......|++..|.++||+++|+++++.++ +.++++ +|+
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 91 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADAL------------LDGSNQYPPMMGLPELRQAVAAHYARFQG--LDLDPETEVM 91 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHH------------hcCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 36899999987765 333333333311 01245799999999999999999988776 446788 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.++++. .+|.+|++.+++.+.+ +++++
T Consensus 92 ~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~v 163 (387)
T PRK08912 92 VTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRA-GGVPRLVRLEP-PHWRLPRAALAAAFSP------RTKAV 163 (387)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccCcCCHHHHHHHhCc------cceEE
Confidence 9999999999999999999999999999999999988887 99999999864 4578999999988764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++..+.++.++.. ..+++++++||||.||
T Consensus 164 ~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~g 235 (387)
T PRK08912 164 LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG--------MRERTVKIGSAGKIFS 235 (387)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC--------ccCceEEEeechhhcc
Confidence 99999999999999999999999999999999999999988776544445444321 2468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||++++++.+ +.+...... +++++..|.++..++... .+++++.++.++++++.+.+.|++.|+++.+
T Consensus 236 ~~GlRiG~~~~~~~~~-~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 311 (387)
T PRK08912 236 LTGWKVGFVCAAPPLL-RVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARSRDRLAAGLRRIGFPVLP 311 (387)
T ss_pred CcCceeEEEecCHHHH-HHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 9999999999965544 444333322 345667788887777532 4457788999999999999999999999999
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+++|+|+|++++..... .++.+++..+++++||.|.||..|+.. ..+|+||+++. +++.+++++++|++++++
T Consensus 312 ~~g~~~l~~~l~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 312 SQGTYFLTVDLAPLGLA---EDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred CCcceEEEecccccCCC---CCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 99999999999752100 234467888888889999999998642 35799999996 799999999999998875
No 41
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.4e-48 Score=393.37 Aligned_cols=355 Identities=25% Similarity=0.456 Sum_probs=292.5
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
+++|+|+.+.+.++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ +.++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~~I~ 93 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT------------ENYTSYTHNAGLLELRKAACNFVKDKYD--LHYSPESEII 93 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46799999987765 4556666665311 1245798889999999999999987766 456788 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+.+++.+++++||.|++++|+|..|...+... |++++.++.+. .+|.+|.+.+++.+++ +++++
T Consensus 94 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~i 165 (387)
T PRK07683 94 VTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC-GAKPVFIDTRS-TGFRLTAEALENAITE------KTRCV 165 (387)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHc-CCEEEEeecCc-ccCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999888877 99999999874 5788898999888764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|+++|+++|++||+||+|+++.+++. ..++.++.. ..+++++++||||+||
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~--------~~~~vi~~~s~SK~~~ 236 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPE--------MREKTIVINGLSKSHS 236 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccC--------CcCCeEEEeecccccc
Confidence 9999999999999999999999999999999999999999776543 234444421 3468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||+++++..+ +.+.+... ..+++++.|.++..+|.++. .++++.++.++++++.+.+.|.+.++.+.+
T Consensus 237 ~pGlRiG~i~~~~~l~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 312 (387)
T PRK07683 237 MTGWRIGFLFAPSYLA-KHILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKKRRDYVYNRLISMGLDVEK 312 (387)
T ss_pred CccceeEEEEcCHHHH-HHHHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 9999999999965544 43433322 23467789999999997653 357788889999999999999998999889
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+++|+|+|+.++... .++.+++..+++++||.+.||+.|+..+++++||+++. +++++.+++++|.+++++..|
T Consensus 313 ~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~~~~ 386 (387)
T PRK07683 313 PTGAFYLFPSIGHFT-----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQKAK 386 (387)
T ss_pred CCeeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhhcc
Confidence 999999999987421 12335677778889999999999986667899999995 899999999999999876544
No 42
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-48 Score=366.79 Aligned_cols=358 Identities=20% Similarity=0.311 Sum_probs=313.4
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|.|-+.+-.++ ++.+.+++++..+ .+...|+ .+.+++.+++++|++++++. .++++.|+
T Consensus 24 ~~DvlPmWVADMDf~~pp~i~~Al~~rvd------------hGvfGY~--~~~~~~~~ai~~w~~~r~~~--~i~~e~i~ 87 (388)
T COG1168 24 NEDVLPMWVADMDFPTPPEIIEALRERVD------------HGVFGYP--YGSDELYAAIAHWFKQRHQW--EIKPEWIV 87 (388)
T ss_pred CCCcceeeeecccCCCCHHHHHHHHHHHh------------cCCCCCC--CCCHHHHHHHHHHHHHhcCC--CCCcceEE
Confidence 358899999988886 6788888887532 2345676 45588999999999999984 47899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++.|...++..++++|+++||.|++..|.|+++....+.. |.++++.|+. .++.|.+|+++|++++.+. ++++
T Consensus 88 ~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n-~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~-----~vkl 161 (388)
T COG1168 88 FVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLN-GRKVIENPLVEDDGRYEIDFDALEKAFVDE-----RVKL 161 (388)
T ss_pred EcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhc-CcEEEeccccccCCcEEecHHHHHHHHhcC-----CccE
Confidence 9999999999999999999999999999999999999987 9999999986 5678999999999998752 6899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
.++||||||||.+++.+||.+|.++|.+||+.||+||+|+++++.+..+.+..++.+. ..++.+.+.|.||+|
T Consensus 162 ~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~-------~a~~~it~~saSKtF 234 (388)
T COG1168 162 FILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSER-------FADNSITLTSASKTF 234 (388)
T ss_pred EEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChh-------hhcceEEEeeccccc
Confidence 9999999999999999999999999999999999999999999999877887777553 457899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHH-HHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAA-TKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GI 349 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~-~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~ 349 (469)
+++|+++++++.+++.++... +++ .....+|.++..|..++.+.+ ..|+++.++.++.+++++.+.|++. ++
T Consensus 235 NlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~~yl~~N~~~~~~~l~~~~P~v 311 (388)
T COG1168 235 NLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELLEYLKDNRDYVADFLNKHLPGV 311 (388)
T ss_pred cchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 999999999999888875543 333 234458889999999999887 5689999999999999999999998 89
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++..|+|.+.+|+++....- ++.++.+.++.+.+|.+.+|..||..+.+++|+++++ +++.+++++++|+.+++
T Consensus 312 ~v~~p~gTYL~WLD~r~l~l-----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~ 385 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELGL-----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALK 385 (388)
T ss_pred EEecCCCceeeeeeccccCC-----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHh
Confidence 99999999999999986432 2236788999999999999999999999999999995 99999999999999988
Q ss_pred hhc
Q 043923 430 SIT 432 (469)
Q Consensus 430 ~~~ 432 (469)
.++
T Consensus 386 ~~~ 388 (388)
T COG1168 386 KRR 388 (388)
T ss_pred ccC
Confidence 653
No 43
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=391.46 Aligned_cols=342 Identities=18% Similarity=0.267 Sum_probs=273.5
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
++|+|+.|+|+++ ++.+.+++.+.. .....|++..|.++||+++|++++++++ +++++++|++|
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~l~~~~g--~~~~~~~I~it 89 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNA-------------HLLNKYPKSAGEESLREAQRGFFKRRFK--IELKENELIPT 89 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHh-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEEe
Confidence 7899999999885 456777766531 2356799999999999999999998877 45789999999
Q ss_pred CChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 118 AGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 118 ~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+++++..++.+++ .+||.|+++.|+|+.|...+... |+++++++++.+++|.+|+...+ +. ++++|
T Consensus 90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~~~--~~-------~~k~v 159 (374)
T PRK05839 90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-RAKVLLMPLTKENDFTPSLNEKE--LQ-------EVDLV 159 (374)
T ss_pred cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhc-CCEEEEeecccccCCcCCcchhh--hc-------cccEE
Confidence 999999999888764 57999999999999999999877 99999999987778888765432 21 68999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++++|+++|++||++||+||+|.++.++. .+.++....... +....+++|+++||||+||
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~---~~~~~~~vi~~~SfSK~~~ 235 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILV---GNESFKNVLVINSISKRSS 235 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhccc---CccccCcEEEEeccccccC
Confidence 999999999999999999999999999999999999999864432 334443321100 0013479999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+||+|+||+++++ .+.+.+..... .+.++.+.|.++..++.+.. ++++.++.++++++.+.+.| ++. .
T Consensus 236 ~~GlRiG~ii~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l---~~~--~ 305 (374)
T PRK05839 236 APGLRSGFIAGDA-SILKKYKAYRTYLGCASPLPLQKAAAVAWLDDE----HAEFFRNIYAKNLKLAREIL---GIT--I 305 (374)
T ss_pred CccceeEEEecCH-HHHHHHHHHHhhcCCCCChHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHhc---CCC--C
Confidence 9999999999964 45454544432 23477888988887876643 46777888888888887765 444 6
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
|.+|+|+|++++. ..+++.++++++||.|.||+.|+.. .++|+||+++. +++++.+++++|+++++
T Consensus 306 p~gg~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 306 PPATFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred CCeeEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 7889999999862 2367788887789999999988753 36899999985 89999999999999875
No 44
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-48 Score=390.89 Aligned_cols=355 Identities=22% Similarity=0.362 Sum_probs=290.2
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC-CCcEEE
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD-TSKIVL 116 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~ 116 (469)
++++|+.|+++++ ++.+.+++++.... .....|++..|.+++|+++++++.+.++ +.++ +++|++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~~~~~~l~~~~g--~~~~~~~~i~~ 94 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN-----------PENHKYQAVQGIPPLLEAITQKLQQDNG--IELNNEQAIVV 94 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEEE
Confidence 6799999999874 56677777653211 1235799899999999999999987766 3345 678999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+ .+|.+|++++++++++ ++++|+
T Consensus 95 t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~klv~ 165 (389)
T PRK05957 95 TAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA-GCQPILVPTD--DNYQLQPEAIEQAITP------KTRAIV 165 (389)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEeecC--CCCCcCHHHHHHhcCc------CceEEE
Confidence 999999999999999999999999999999998877766 9999999986 4678999999998864 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++|||||||.++|.+++++|+++|+++|+++|+||+|.++.|++....++..+.. ..+++|+++||||.||+
T Consensus 166 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~g~ 237 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG--------SGNHTISLYSLSKAYGF 237 (389)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC--------ccCcEEEEecchhhccC
Confidence 9999999999999999999999999999999999999998776543334443322 44789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-C-Ccee
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-G-ISCL 352 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g-~~v~ 352 (469)
+|+|+||++++++ +.+.+...... .+++.+.|.++..+|+++. .++++.++.++++++.+.+.|+++ + +.+.
T Consensus 238 ~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 313 (389)
T PRK05957 238 ASWRIGYMVIPIH-LLEAIKKIQDTILICPPVVSQYAALGALQVGK---SYCQQHLPEIAQVRQILLKSLGQLQDRCTLH 313 (389)
T ss_pred ccceeEEEecCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 9999999999654 44444444332 3467789999999997742 345666777899999999999887 5 3777
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
++++|+|+|++++... ++.++++.+++++||.+.||+.|+...++|+||+++..+++++++++++|.+.++++-
T Consensus 314 ~~~gg~~~~~~~~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 314 PANGAFYCFLKVNTDL------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CCCeeEEEEEeCCCCC------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 8899999999987432 2446888888888999999999976556799999986789999999999999988754
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 388 ~ 388 (389)
T PRK05957 388 Q 388 (389)
T ss_pred c
Confidence 3
No 45
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-48 Score=383.47 Aligned_cols=330 Identities=25% Similarity=0.395 Sum_probs=282.3
Q ss_pred CeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
++++|++||||++| +.+.++++.. ...+.+||++ ...+|+++++++++. +++++|+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~-------------~~~~~rYPd~-~~~~l~~a~a~~~~~-------~~~~~V~~g 81 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAA-------------LDKLNRYPDP-DYRELRAALAEYYGV-------VDPENVLVG 81 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCC-cHHHHHHHHHHHhCC-------CCcceEEEc
Confidence 68999999999975 6666666553 2357899988 579999999999961 578999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|++++|..++++++.+||+|+++.|+|..|...++.. |++++.+|..+ |.+|++.+..++.+ ++++|++
T Consensus 82 nGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~-g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i 151 (356)
T COG0079 82 NGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLA-GAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFL 151 (356)
T ss_pred CChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhc-CCeEEEecccc---cccCHHHHHHhhhc------CCCEEEE
Confidence 99999999999999999999999999999999999988 99999999873 88999999998875 7999999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
||||||||..++.++++++++.+.+ +.+||+||||.+ |.+. +...+.. .++|+++++||||+||++
T Consensus 152 ~nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~e--F~~~---~~~~l~~--------~~~nlivlRTfSKa~gLA 217 (356)
T COG0079 152 CNPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIE--FSPE---SSLELLK--------YPPNLIVLRTFSKAFGLA 217 (356)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhh--cCCc---hhhhhcc--------CCCCEEEEEecHHhhhcc
Confidence 9999999999999999999999988 999999999998 5542 3333332 347899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eecCCc
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS-CLKSNA 356 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~-v~~~~~ 356 (469)
|+|+||+++ ++.+.+.+++.+.+|.+|.+++.++.+++.+.+ ++++.++.+...|+++.+.|+++|+. +.++.
T Consensus 218 GlRlGy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~----~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~- 291 (356)
T COG0079 218 GLRVGYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDAD----YLEESVERIREERERLYAALKALGLFGVFPSQ- 291 (356)
T ss_pred hhceeeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHH----HHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-
Confidence 999999988 566778888888888899999999999999864 58888999999999999999999865 67766
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++|++++++.. . ...+.+.|+ ++||.|+.+.. .+..++|+||+++ ++++.++++++|+++++.
T Consensus 292 aNFvlv~~~~~------~-~~~l~~~L~-~~giivR~~~~-~~~~~~~lRitvg--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 292 ANFVLVRVPDA------E-AAALAEALL-KKGILVRDCSS-VGLLPGYLRITVG--TPEENDRLLAALREVLKG 354 (356)
T ss_pred CcEEEEECCCc------c-HHHHHHHHH-HCCEEEEeCCC-CCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 58999999851 1 224556665 56999999876 4456789999998 788899999999998865
No 46
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.9e-48 Score=392.47 Aligned_cols=350 Identities=21% Similarity=0.324 Sum_probs=288.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.|.+.++ ++.+.+.+++... .....|++..|.++||+++++++++.++ +..+++ +|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~~a~~l~~~~~--~~~~~~~~i~ 95 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMA------------AGHNQYPPMTGVAALREAIAAKTARLYG--RQYDADSEIT 95 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 36899999988875 4556666655311 1235799889999999999999988776 334554 899
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|++++|+|..+...++.. |++++.++++. .+|.+|++++++.+++ +++++
T Consensus 96 ~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~------~~~~v 167 (386)
T PRK09082 96 VTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELA-GGRAVRVALQP-PDFRVDWQRFAAAISP------RTRLI 167 (386)
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccccCCHHHHHHhcCc------cceEE
Confidence 9999999999999999999999999999999999988887 99999999974 3688999999988864 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++|++++|+||+|.++.|++....++.++.. ..+++++++||||.||
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~--------~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPE--------LRERAFVVSSFGKTYH 239 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcC--------ccCcEEEEeechhhcc
Confidence 99999999999999999999999999999999999999998886654556555422 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||++++++ +.+.+.+.. ..++++.+.|.++..++... .+++++.++.++++++++.+.|++.++++.+
T Consensus 240 ~~G~RiG~iv~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 315 (386)
T PRK09082 240 VTGWKVGYCVAPAA-LSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAKRDRFRAALANSRFKLLP 315 (386)
T ss_pred chhhhhhhhhCCHH-HHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 99999999999654 444444433 22357889999999998742 4567888899999999999999999999999
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
+++|+|+|+++++... .+..+++.++++++||.+.||+.|+. .+.+++|++++. +++++++++++|++
T Consensus 316 ~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 316 CEGTYFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred CCeeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999999974211 12346788888899999999998863 345799999996 89999999999975
No 47
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.5e-48 Score=390.25 Aligned_cols=354 Identities=23% Similarity=0.384 Sum_probs=287.6
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.++++++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ +.+++++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 94 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALR------------RGVTQYTSALGLAPLREAIAAWYARRFG--LDVAPERIV 94 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHhEE
Confidence 347899999998874 4556666655311 2245699888999999999999988766 457899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||.|++++|+|..+...+... |++++.+|++.+++|.+|++++++.+++ ++++|
T Consensus 95 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v 167 (388)
T PRK07337 95 VTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAA-EGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGV 167 (388)
T ss_pred EecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCcCCHHHHHhhcCc------cceEE
Confidence 9999999999999999999999999999999998888777 9999999998667789999999988764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|+++|+++++++|+||+|.++.+.+. ..+...+ .+++++++||||.||
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~-----------~~~vi~~~S~SK~~~ 235 (388)
T PRK07337 168 LLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL-----------GDDVITINSFSKYFN 235 (388)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc-----------cCCEEEEEechhhcC
Confidence 9999999999999999999999999999999999999998766543 2333222 257899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce-e
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC-L 352 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v-~ 352 (469)
+||+|+||+++++. +.+.+..... ..+++.+.|.++..++.+..+ .++++.++.++++++.+.+.|+++|+.+ .
T Consensus 236 ~~G~RiG~~~~~~~-l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~ 312 (388)
T PRK07337 236 MTGWRLGWLVVPEA-LVGTFEKLAQNLFICASALAQHAALACFEPDTL--AIYERRRAEFKRRRDFIVPALESLGFKVPV 312 (388)
T ss_pred CchhheeeeecCHH-HHHHHHHHHHHhccCCChHHHHHHHHHhccCch--HHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 99999999999655 4444443332 234788999999999876542 3457788899999999999999988765 4
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.|++|+|+|++++...... ..++.+++.++++++||.|.||+.|+.. .++|+||+++. +++++++++++|.+++
T Consensus 313 ~p~~g~f~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 313 MPDGAFYVYADCRGVAHPA-AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCeeEEEEEecccccCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 6789999999997531111 1234467888888899999999999753 46799999996 8999999999998865
No 48
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1e-47 Score=389.45 Aligned_cols=361 Identities=20% Similarity=0.312 Sum_probs=283.0
Q ss_pred CCCeeeeecccc-c--c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN-Q--L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
..++|+|+.|.+ + + +++.+.+.+.+. ......|++..|.++||+++|+++.++.. .+++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~ 96 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRN-------------LPTAQGYSDSKGLFSARKAIMQYYQQKGI--PDVDVD 96 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCCCcHHHHHHHHHHHhccCC--CCCCcc
Confidence 347899999744 2 2 234444444432 12245799999999999999999975432 247899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|++|+|+++++..++.+++++||+|++++|+|..+...+... |.+++.++++.+++|.+|++++++++++ ++
T Consensus 97 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (404)
T PRK09265 97 DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLS-GGKPVHYLCDEEAGWFPDLDDIRSKITP------RT 169 (404)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhccc------cc
Confidence 9999999999999999999999999999999999999988877 9999999887666788999999988754 78
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|++....++..+.+ ..++++++||||
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---------~~~vi~~~S~SK 240 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP---------DLLCVTFNGLSK 240 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC---------CceEEEEecchh
Confidence 99999999999999999999999999999999999999999998776654456555422 247899999999
Q ss_pred ccCCCcceEEEEEec-CHH----HHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 273 DLGLPGFRVGAIYSN-DDM----VVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 273 ~~g~~GlRiG~li~~-~~~----~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
+||+||+|+||++++ +.. +.+.+.... ....++.++|.++.++|.+.+...++++. ++.+.++++.+.+.|++
T Consensus 241 ~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~r~~~~~~L~~ 319 (404)
T PRK09265 241 AYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILP-GGRLYEQRDRAWELLNA 319 (404)
T ss_pred hccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 999999999999963 222 222222222 12347889999999999765442333332 34567778999999988
Q ss_pred c-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 347 A-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 347 ~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
+ |+++.+|.+|+|+|++++..... ..++.+.+.+++.++||.|.||+.|+...++|+|++++ .+++++++++++|+
T Consensus 320 ~~~~~~~~p~~g~~l~~~~~~~~~~--~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~ 396 (404)
T PRK09265 320 IPGVSCVKPKGALYAFPKLDPKVYP--IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIG 396 (404)
T ss_pred CCCCcccCCCcceEEEEEecccccC--CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHH
Confidence 7 88888999999999999753210 01233456677788899999999997656789999997 58999999999999
Q ss_pred HHHHhhc
Q 043923 426 AFVDSIT 432 (469)
Q Consensus 426 ~~l~~~~ 432 (469)
++++...
T Consensus 397 ~~l~~~~ 403 (404)
T PRK09265 397 RFLSGYR 403 (404)
T ss_pred HHHHHhc
Confidence 9997554
No 49
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.5e-48 Score=397.08 Aligned_cols=340 Identities=19% Similarity=0.262 Sum_probs=278.9
Q ss_pred CCeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
..+++|+.+.+..++ +.+.+++.+.. .....|++..|.++||+++++++++..+ .+++|++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-----~~~~Iii 146 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLS-------------RTPRLYGDAPVSPELHAWAARWLRDDCP-----VAFEIDL 146 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhh-------------hhhhhcCCcCCCHHHHHHHHHHHhhccC-----CcCeEEE
Confidence 357999998666543 55556555421 2245799999999999999999975422 3579999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|++++|..+++++++|||.|++++|+|..|...++.. |++++.+|++++ .+|++.+++++++ ++++++
T Consensus 147 t~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~ 216 (431)
T PRK15481 147 TSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYA-GFSASPVSVDAE---GMQPEKLERALAQ------GARAVI 216 (431)
T ss_pred ecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEE
Confidence 999999999999999999999999999999999999987 999999999743 3788999988864 678888
Q ss_pred Ee-cCCCCCCCCCCHHHHHHHHHHHHhc-CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 197 VT-NPSNPLGTTMSRNELNLLVNIITEK-NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 197 l~-~P~NPtG~~~s~e~l~~l~~~~~~~-~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++ |||||||.++|.+++++|+++|+++ +++||+||+|.++.++.. .+.... ..+++++++||||+|
T Consensus 217 ~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~----------~~~~vi~~~SfSK~~ 284 (431)
T PRK15481 217 LTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ----------TTQRWALIRSVSKAL 284 (431)
T ss_pred ECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC----------CCCCEEEEeeecccc
Confidence 86 9999999999999999999999999 999999999998765432 222211 236899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
| ||+|+||+++++.. .+.+...... .+++.+.|.++..+|.++.+ .+++++.++.++++++.+.+.|++.++++.
T Consensus 285 ~-~GlRiG~~i~~~~~-~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~ 361 (431)
T PRK15481 285 G-PDLRLAFVASDSAT-SARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGIAIP 361 (431)
T ss_pred C-CCceeEEEeCCHHH-HHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 9 99999999996554 4444333222 34789999999999999877 788999999999999999999999998887
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.|.+|+|+|++++.. ..+++..++ ++||.|.||+.|+.. ..+++||+++..+++++++++++|++++.
T Consensus 362 ~p~gg~f~~~~l~~~--------~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 362 SPGDGLNLWLPLDTD--------SQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred cCCCeEEEEEECCCC--------HHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 889999999999731 235666665 679999999999643 24689999997789999999999999875
No 50
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.9e-47 Score=387.12 Aligned_cols=360 Identities=23% Similarity=0.372 Sum_probs=291.4
Q ss_pred CCCeeeeeccccc----c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAENQ----L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
..++|+|+.+.+. + +++.+.+++.+.... .....|++..|.+++|+++|++++...+ +.+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 96 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS-----------GKFNGYAPSVGALAAREAVAEYLSSDLP--GKLTA 96 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCH
Confidence 3578999999864 2 345566666553111 1234798889999999999999987554 44678
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
++|++|+|+++|+.+++.+++.+||+|+++.|+|..+...+... |++++.++++.+++|.+|++.+++.+.+ +
T Consensus 97 ~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 169 (403)
T TIGR01265 97 DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFS-GLEVRLYDLLPEKDWEIDLDGLEALADE------K 169 (403)
T ss_pred HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEecCCcccCCccCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999998888777 9999999987666788999999988754 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++.++.+ ..++|+++|||
T Consensus 170 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---------~~~vi~~~S~S 240 (403)
T TIGR01265 170 TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS---------IVPVLSLGGIS 240 (403)
T ss_pred ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc---------CCcEEEEeecc
Confidence 889999999999999999999999999999999999999999998877655556555522 25799999999
Q ss_pred cccCCCcceEEEEEecC--HH----HHHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 272 KDLGLPGFRVGAIYSND--DM----VVAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~--~~----~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
|+|++||+|+||+++++ .. +.+.+..... ...++.+.|.++..+|.+.. ..++++.+++++++++.+.+.|
T Consensus 241 K~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L 318 (403)
T TIGR01265 241 KRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISVLKSNAELCYEEL 318 (403)
T ss_pred cccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999853 22 2222333332 34578899999999997632 5678889999999999999999
Q ss_pred Hhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 043923 345 EKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQR 423 (469)
Q Consensus 345 ~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~ 423 (469)
+.+ |+.+..|.+|+|+|++++..... ...+..+++..+++++||.|.||+.|+ .++|+||+++. +++.+++++++
T Consensus 319 ~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~~ 394 (403)
T TIGR01265 319 KDIPGLVCPKPEGAMYLMVKLELELFP-EIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITITV-PESMLEEACSR 394 (403)
T ss_pred hcCCCceecCCCceeEEEEeccccccC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEecC-CHHHHHHHHHH
Confidence 987 78877888999999999753211 011345678888888899999999996 37899999995 78999999999
Q ss_pred HHHHHHhh
Q 043923 424 LKAFVDSI 431 (469)
Q Consensus 424 L~~~l~~~ 431 (469)
|+++++++
T Consensus 395 l~~~~~~~ 402 (403)
T TIGR01265 395 IKEFCERH 402 (403)
T ss_pred HHHHHHhc
Confidence 99998654
No 51
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.4e-47 Score=385.56 Aligned_cols=358 Identities=19% Similarity=0.294 Sum_probs=285.9
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
..++|+|+.+.+... ++.+.+.+.+.... .....|+++.|.++||++++++++++++ +.++++ +|
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i 94 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQR-----------PDTHGYSTSRGIPRLRRAISRWYQDRYD--VDIDPESEA 94 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 457899999866553 33333333332110 2346799999999999999999998776 446776 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++..++++||+|++++|+|+.+...+... |++++.++++.+++ ++++++++++.. .+++++
T Consensus 95 ~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~---~~~~l~~~l~~~---~~~~~~ 167 (395)
T PRK08175 95 IVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIA-GAQVRSVPLVEGVD---FFNELERAIRES---YPKPKM 167 (395)
T ss_pred EEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCeEEEEecccCCC---cHHHHHHHHhhc---cCCceE
Confidence 99999999999999999999999999999999998888777 99999999876543 367777776531 237899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++++||||||.+++.+++++|+++|++||++||+||+|.++.+++....++..+.. ..+++++++||||.|
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~ 239 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG--------AKDVAVEFFTLSKSY 239 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC--------cccCEEEEeeccccc
Confidence 999999999999999999999999999999999999999998776544445444311 236788999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|+||+|+||++++++ +.+.+.+... .++++++.|.++..++... .+++++.++.++++++++.+.|+++|+.+.
T Consensus 240 g~pGlRiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 315 (395)
T PRK08175 240 NMAGWRIGFMVGNPE-LVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKRRRDVLVKGLHEAGWMVE 315 (395)
T ss_pred cCcchhheeeeCCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 999999999998554 5445544443 2346677888888888653 567888899999999999999999999888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++.+|+|+|++++..... .++.+++.++++++||.|.||..|+..+++++||+++ .+++.+++++++|++++++
T Consensus 316 ~p~~g~~i~i~l~~~~~~---~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 316 MPKASMYVWAKIPEPYAA---MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCCEEEEEEEECCcccCC---CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHh
Confidence 888999999999864321 1234677888888899999999997666789999998 4899999999999999864
No 52
>PRK07324 transaminase; Validated
Probab=100.00 E-value=8.4e-48 Score=385.51 Aligned_cols=344 Identities=22% Similarity=0.287 Sum_probs=284.6
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
...++++|+++++..+ ++.+ ++..+... .....|++..|.++||++||++++ .+++++|
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~-------~~~~~~v 83 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNP-EAFYQELG------------QKKLTYGWIEGSPEFKEAVASLYQ-------NVKPENI 83 (373)
T ss_pred ccCCCCCCcHHHHHhccCcch-HHHHHHHh------------cCCccCCCCCCCHHHHHHHHHHhc-------CCChhhE
Confidence 4567999999998775 3344 33332111 123479999999999999999985 1578999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++|+.+++.+++++||+|+++.|+|..+...++.. |++++.+|++.+++|.+|++++++.+++ ++++
T Consensus 84 i~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~kl 156 (373)
T PRK07324 84 LQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLVRP------NTKL 156 (373)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhCCC------CCcE
Confidence 99999999999999999999999999999999999888877 9999999998777888999999887754 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++.+. .+++|+++||||+|
T Consensus 157 i~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~-----------~~~~I~~~s~SK~~ 224 (373)
T PRK07324 157 ICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL-----------YEKGISTNSMSKTY 224 (373)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc-----------cCCEEEEecchhhc
Confidence 99999999999999999999999999999999999999998766542 3343332 35789999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v 351 (469)
|++|+|+||++++ +.+.+.+.+...+ .+++.++|.++..+|... +.++++.++.++++++.+.+.|++. ++.+
T Consensus 225 ~~~G~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 300 (373)
T PRK07324 225 SLPGIRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDEWVAKEPRVSY 300 (373)
T ss_pred CCccceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 9999999999995 5555555555433 346778899888888753 5678888899999999999999887 7788
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
..|++|+|+|+.++.. .+..+++.++++++||.|.||+.|+. ++++||+++. +++.+++++++|++++++.
T Consensus 301 ~~p~gg~~~~i~~~~~------~~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 301 VKPKAVSTSFVKLDVD------MPSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred ECCCceEEEEEEeCCC------CCHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 8899999988888642 12446888888889999999999964 6799999985 8999999999999999753
No 53
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-47 Score=385.53 Aligned_cols=353 Identities=24% Similarity=0.449 Sum_probs=289.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|.++++ ++.+.+++.+.. .....|++..|.++||++++++++. ++ +++++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~~-~~--~~~~~~~i~~ 93 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD-------------EEVLAYSHSQGIPELREAFAKYYKK-WG--IDVEPDEILI 93 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh-------------cCCcCcCCCCCCHHHHHHHHHHHHH-hC--CCCCcceEEE
Confidence 46899999999874 556666665531 2345799999999999999999983 44 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCccc-CHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQI-TETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++++.+.+|.+ +++.+++++++ ++++|
T Consensus 94 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v 166 (397)
T PRK07568 94 TNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSA-GVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAI 166 (397)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHc-CCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999998887777 99999999875556664 57888888764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++.++.. ..+++++++||||.||
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~--------~~~~~i~~~S~SK~~~ 238 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEG--------LEDRVIIIDSVSKRYS 238 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCC--------CcCCEEEEecchhhcc
Confidence 99999999999999999999999999999999999999998776654456555422 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
++|+|+||++++++.+.+.+.+.. ..++++.+.|.++..+++.. +.++++.++.++++++.+.+.|+++ ++.+..
T Consensus 239 ~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (397)
T PRK07568 239 ACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRRDILYEELNKIPGVVCEK 315 (397)
T ss_pred CCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 999999999997655555443322 23457889999999999764 4568888999999999999999987 788888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHh-----CCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYD-----VKLNISPGSSCHCT---EPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~-----~GI~v~pg~~f~~~---~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
|.+|+|+|++++.. +..+++..++++ +||.+.||..|+.. +++++||+++. +++++++++++|+
T Consensus 316 p~g~~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~ 387 (397)
T PRK07568 316 PKGAFYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILK 387 (397)
T ss_pred CCcceEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHH
Confidence 99999999999742 233567777754 69999999988532 35799999984 7899999999999
Q ss_pred HHHHhhc
Q 043923 426 AFVDSIT 432 (469)
Q Consensus 426 ~~l~~~~ 432 (469)
+++++..
T Consensus 388 ~~l~~~~ 394 (397)
T PRK07568 388 EALEKYN 394 (397)
T ss_pred HHHHHhh
Confidence 9997644
No 54
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.9e-47 Score=386.88 Aligned_cols=355 Identities=23% Similarity=0.341 Sum_probs=286.7
Q ss_pred CCCeeeeecccc---cc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN---QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
+.++|+|+.|.+ .+ +++.+.+++.+... .....|++..|.++||+++|+++++.++ +.++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~ 94 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIK------------EGHNYYGPSEGLPELREAIVKREKRKNG--VDITPD 94 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCChh
Confidence 457899999998 44 45666666654211 1134698888999999999999988766 457899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEe-eccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPI-QCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+|++|+|+++|+..++.+++++||.|++++|+|..+...+... |.+++.+ +.+ +.+|.+|++.+++++++ +
T Consensus 95 ~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~v~~~~~~-~~~~~~d~~~l~~~~~~------~ 166 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFY-GGVPVEYRTIE-EEGWQPDIDDIRKKITE------K 166 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEecccc-ccCCcCCHHHHHhhCCc------c
Confidence 9999999999999999999999999999999999999888877 9998888 444 35688999999888754 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. +.++..+. ...++++++|||
T Consensus 167 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~---------~~~~vi~~~SfS 236 (398)
T PRK08363 167 TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLT---------KDVPVIVMNGLS 236 (398)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcC---------cCCcEEEEecch
Confidence 89999999999999999999999999999999999999999998777543 23444442 235799999999
Q ss_pred cccCCCcceEEEEEe--cCHHHHHHHHHhc----ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 272 KDLGLPGFRVGAIYS--NDDMVVAAATKMS----SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 272 K~~g~~GlRiG~li~--~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
|+|++||+|+||+++ ++..+........ ..+.++.+.|.++.++|.+. .+++++.++.++++++.+.+.|+
T Consensus 237 K~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~~~~~~~l~~~L~ 313 (398)
T PRK08363 237 KVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKLKERRDYIYKRLN 313 (398)
T ss_pred hccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999997 4433322222211 12457889999999998752 55688888999999999999998
Q ss_pred hc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 346 KA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 346 ~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
++ ++++.++.+|+|+|++++.... .++.+++..+++++||.|+||+.|+..+++|+||+++ .+++++++++++|
T Consensus 314 ~~~~~~~~~p~g~~~~~~~l~~~~~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~l 388 (398)
T PRK08363 314 EIPGISTTKPQGAFYIFPRIEEGPW----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDRF 388 (398)
T ss_pred cCCCCEecCCCeEEEEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHH
Confidence 87 7888889999999998875210 1233566777788999999999997656789999998 4889999999999
Q ss_pred HHHHHhh
Q 043923 425 KAFVDSI 431 (469)
Q Consensus 425 ~~~l~~~ 431 (469)
++++.+.
T Consensus 389 ~~~~~~~ 395 (398)
T PRK08363 389 EEFMRER 395 (398)
T ss_pred HHHHHHh
Confidence 9988763
No 55
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=7.5e-48 Score=390.01 Aligned_cols=350 Identities=20% Similarity=0.273 Sum_probs=273.5
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|+++++ ++.+.+++.+..... . .......|++..|.++||+++|+++.+. .+++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~-~------~~~~~~~Y~p~~g~~~lr~aia~~~~~~-----~~~~d~I~ 99 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDEL-A------SEETFRGYGPEQGYPFLREAIAENDYRG-----RIDPEEIF 99 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcc-c------ccccccCCCCCCCCHHHHHHHHHHHHhc-----CCCHHHEE
Confidence 457899999999875 455566555421100 0 0012356988889999999999986321 26899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCC-----------EEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGV-----------EIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+|+|+++++..++ .++.+||.|++++|+|..|...++.. |+ ++++++++.+++|.+|+...
T Consensus 100 it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------ 171 (402)
T TIGR03542 100 ISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMA-GRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE------ 171 (402)
T ss_pred ECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCccccccccccceEEEeecchhhCCCCCcccc------
Confidence 9999999999875 55689999999999999999988877 99 99999987656676664221
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
.++++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++....++..+.. ..+++
T Consensus 172 -----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~--------~~~~v 238 (402)
T TIGR03542 172 -----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPG--------AKECA 238 (402)
T ss_pred -----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCC--------CcccE
Confidence 27899999999999999999999999999999999999999999997665432233333311 23679
Q ss_pred EEEccCccccCCCcceEEEEEecCHHH-------HHHHH-Hh-cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSNDDMV-------VAAAT-KM-SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~~~~~-------~~~~~-~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
|+++||||.||+||+|+||+++++..+ ..... .. ...++++.+.|.++..++.+..+ .+..+.++.+++
T Consensus 239 i~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~ 316 (402)
T TIGR03542 239 IEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAISYYME 316 (402)
T ss_pred EEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHHHHHHH
Confidence 999999999999999999999976544 12221 12 23335788999999999887553 345667788899
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHH
Q 043923 336 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSED 415 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e 415 (469)
+++.+.+.|++.|+++.++.+|+|+|++++... ++.+++..+++++||.++||+.|+..+++|+||+++. +++
T Consensus 317 ~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~ 389 (402)
T TIGR03542 317 NARILRKALEAAGFKVYGGEHAPYLWVKTPEGI------SSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRE 389 (402)
T ss_pred HHHHHHHHHHhcCceecCCCceeEEEEECCCCC------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHH
Confidence 999999999998888888888999999998532 2336888888888999999999976567899999875 899
Q ss_pred HHHHHHHHHHHHH
Q 043923 416 TLKLSMQRLKAFV 428 (469)
Q Consensus 416 ~i~~~l~~L~~~l 428 (469)
++++++++|++++
T Consensus 390 ~l~~~l~~l~~~~ 402 (402)
T TIGR03542 390 NIVEACERIKEAL 402 (402)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998763
No 56
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-47 Score=384.59 Aligned_cols=358 Identities=25% Similarity=0.481 Sum_probs=295.0
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
..+|+|+.+.+.++ ++.+.+++.+... .....|++..|..+||+++|+++++.++ ..+++++|++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 96 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALD------------DGKTKYTPAAGIPELREAIAAKLKRDNG--LDYDPSQVIV 96 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 46899999999886 4556666655311 1234699889999999999999988776 3467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+.+++|.+|++.+++.+++ ++++++
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (393)
T PRK05764 97 TTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLA-GGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALI 169 (393)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHc-CCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEE
Confidence 999999999999999999999999999999998888877 9999999998667889999999988754 788999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.++|.+++++|+++|++||+++|+||+|.++.|++..+.++.++..+ ..+++++++||||.+|+
T Consensus 170 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~s~SK~~~~ 242 (393)
T PRK05764 170 LNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPE-------LRDRTITVNGFSKAYAM 242 (393)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCC-------CcCCEEEEecCcccccC
Confidence 99999999999999999999999999999999999999887765444455544221 34689999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
+|+|+||++++++ +.+.+..... .+.++++.|.++..++.. . .+++++.++.++++++.+.+.|+++ |+++.+
T Consensus 243 ~G~RiG~i~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 318 (393)
T PRK05764 243 TGWRLGYAAGPKE-LIKAMSKLQSHSTSNPTSIAQYAAVAALNG--P-QDEVEEMRQAFEERRDLMVDGLNEIPGLECPK 318 (393)
T ss_pred ccceeEEEecCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHcC--C-hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence 9999999998654 4444433332 345788999999999873 2 4667888889999999999999998 899888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+++|+|+|++++....... ..+.+++..+++++||.+.||..|+. ++++||+++. +++++++++++|.+++++.
T Consensus 319 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 319 PEGAFYVFPNVSKLLGKSI-TDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred CCcceEEEEeccccccccc-CCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 9999999999986432111 12346788888888999999998864 7899999985 8999999999999998754
No 57
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-47 Score=383.60 Aligned_cols=353 Identities=20% Similarity=0.291 Sum_probs=286.1
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.+.|+|+.++++.+ ++.+.+.+.+.... .....|++..|.++||+++|+++++.++ ..+++++|+
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~ 94 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAAD-----------PAAHLYGPVEGLPELREAYAAHYSRLYG--AAISPEQVH 94 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------cCCcCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEE
Confidence 446899999998875 45566665542110 2345798888999999999999998877 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.+++++++++.+|++++++++++ ++++|
T Consensus 95 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v 167 (386)
T PRK07550 95 ITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDML-GIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAI 167 (386)
T ss_pred EecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEE
Confidence 9999999999999999999999999999999998888877 9999999998666788999999998875 78899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++||||||.++|.+++++|+++|++||++||+||+|+++.++.....++..... ..+++++++||||.||
T Consensus 168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD--------WDDTLVHLYSFSKSYA 239 (386)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC--------ccccEEEEecchhhcc
Confidence 99999999999999999999999999999999999999986544322222222111 2368999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
++|+|+||+++++..+.+....... ..+++.+.|.++..++.+ + .+++++.++.++++++.+.+.|.++ ++.+ .
T Consensus 240 ~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~ 315 (386)
T PRK07550 240 LTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN--L-ADWRAGNRAEIARRRDAFRAVFARLPGWEL-L 315 (386)
T ss_pred CcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc--H-HHHHHHHHHHHHHHHHHHHHHHHhCCCcee-C
Confidence 9999999999965544333332222 234678899999999875 2 6778888899999999999999986 6654 4
Q ss_pred CCceEEEEEeccc-ccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRH-LLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 354 ~~~g~~~~v~~~~-~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+.+|+|+|++++. .. +..+++.++++++||.|.||..|+...++++||+++..+++++++++++|+++
T Consensus 316 ~~g~~~~~~~~~~~~~------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPDR------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCCC------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 5688999999874 22 23467888888899999999999765578999999977899999999999876
No 58
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-47 Score=387.20 Aligned_cols=358 Identities=23% Similarity=0.375 Sum_probs=293.7
Q ss_pred CCeeeeecccccc---ChHHHHHHHhcCCCccccccCCcccccc-cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAENQL---SFDLLESWLDRNPDAAGFKRDGQSIFRE-LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
+.+|+|+.+.+.. |.....+.+....... -.. ...|.+..|.++||++|++++....| +.+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~---------~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g--~~~~~~~ 157 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNY---------GASLALQYGPTAGLPELREAIAAYLLARRG--ISCEPEQ 157 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhc---------chhhhhcCCCCCCcHHHHHHHHHHHHHhcC--CccCcCe
Confidence 6789999886443 3334444443321100 012 45688889999999999999986655 6688999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|+++|+.++.+.+++|||+|++++|+|.....+++.. |+++++||+|.++ +|+++++..+... ++|
T Consensus 158 IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~-g~~~~~vp~d~~G---~~~e~le~~~~~~-----~~k 228 (459)
T COG1167 158 IVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEAL-GARVIPVPVDEDG---IDPEALEEALAQW-----KPK 228 (459)
T ss_pred EEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CCcEEecCCCCCC---CCHHHHHHHHhhc-----CCc
Confidence 999999999999999999999999999999999999999988 9999999998654 8999999998764 788
Q ss_pred EEEEe-cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 194 GVLVT-NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 194 ~vvl~-~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
+++++ +.+||||.+||.+..++|+++|++||++||+||.|+++.|++.+..++..+ +..++||+++||||
T Consensus 229 ~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~l---------d~~~rViy~gSFSK 299 (459)
T COG1167 229 AVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKAL---------DAPGRVIYLGSFSK 299 (459)
T ss_pred EEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhh---------CCCCCEEEEeeehh
Confidence 76544 338999999999999999999999999999999999998887765666665 24589999999999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHH-hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---C
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATK-MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---G 348 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g 348 (469)
+++ ||+|+||+++|+..+...... ......++.+.|.+++..+.++.+ .+++++.++.|+++++.+.+.|.++ .
T Consensus 300 ~l~-PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~ 377 (459)
T COG1167 300 TLA-PGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLPEL 377 (459)
T ss_pred hcc-cccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 996 999999999976655444332 222345889999999999997666 9999999999999999999999998 3
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCCCC--CCeEEEEeecCCHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHCTE--PGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~~~--~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
+++..|.+|+|+|++++...+ +.++.+.++ ++||.+.| |..|.... .+++|++++..+++++++++++|.
T Consensus 378 ~~~~~p~gG~flwl~l~~~~~------~~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~ 450 (459)
T COG1167 378 ATWTRPEGGLFLWLELPEGID------ARELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLA 450 (459)
T ss_pred eeeecCCceEEEEEEcCCCCC------HHHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 678899999999999997643 335666665 56999999 88887654 458999999889999999999999
Q ss_pred HHHHhhcc
Q 043923 426 AFVDSITT 433 (469)
Q Consensus 426 ~~l~~~~~ 433 (469)
+++++...
T Consensus 451 ~~~~~~~~ 458 (459)
T COG1167 451 ALLREAAA 458 (459)
T ss_pred HHHHHHhc
Confidence 99987643
No 59
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.6e-48 Score=384.67 Aligned_cols=333 Identities=17% Similarity=0.256 Sum_probs=270.6
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+|+++ ++.+.+++.+.. .....|| ..|.++||+++|++++ +++++|++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~-------------~~~~~Yp-~~g~~~Lr~aia~~~~--------~~~~~I~v 86 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSW-------------LDHALYP-DGGATTLRQTIANKLH--------VKMEQVLC 86 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHH-------------HhcCcCC-CCCHHHHHHHHHHHhC--------CCcceEEE
Confidence 47899999999995 566777766531 2234576 4588999999999985 68999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|+.|...+... |++++.+|++ ++.+|++++++++++ ++++++
T Consensus 87 t~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~---~~~~d~~~l~~~~~~------~~~~v~ 156 (366)
T PRK01533 87 GSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIE-GCEVKEVALN---NGVYDLDEISSVVDN------DTKIVW 156 (366)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCEEEEeecC---CCCcCHHHHHHHhCc------CCcEEE
Confidence 999999999999999999999999999999999999887 9999999985 335899999988764 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+||||||||.+++.+++++|+++|++++ ++|+||+|.++.+.+. ..+...... ..+++|+++||||+||+
T Consensus 157 i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~-~~~~~~~~~--------~~~~vi~~~SfSK~~~l 226 (366)
T PRK01533 157 ICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD-FPETLPLLE--------KHKNILVLRTFSKAYGL 226 (366)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc-CcchhHHhc--------cCCCEEEEeCchHHhcC
Confidence 9999999999999999999999998877 5677999998655432 223333332 44789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA 356 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~ 356 (469)
||+|+||++++ +.+.+.+.+....++++.++|.++.++|++.++ .++.++.++++++.+.+.++.+|+++.++++
T Consensus 227 ~GlRiG~~i~~-~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~~ 301 (366)
T PRK01533 227 ASFRVGYAVGH-EELIEKLNVVRLPFNVSSLAQKAATIAFGDDEF----IEEIVRVNTEGLRQYESFCKENEIPFYQSQT 301 (366)
T ss_pred hHHHHhHHhCC-HHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHhCCCccCCCcC
Confidence 99999999996 445555555555667899999999999987554 5666777788888888899888999888865
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhccccc
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLH 436 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~~ 436 (469)
+|+|++++. ..++.+.++ ++||.|++ | ++++||+++ +++++++++++|+++++..+.++.
T Consensus 302 -nf~~~~~~~---------~~~~~~~l~-~~GI~Vr~---~----~~~iRis~~--~~~~~~~l~~al~~~~~~~~~~~~ 361 (366)
T PRK01533 302 -NFIFLPVEN---------GGEIYEACA-HAGFIIRP---F----PNGVRITVG--TREQNEGVISVLQQHFENKKRKSR 361 (366)
T ss_pred -cEEEEeCCC---------HHHHHHHHH-HCCcEEcc---C----CCceEEeCC--CHHHHHHHHHHHHHHHHhcccccc
Confidence 799999862 124555555 67999997 3 468999998 799999999999999877666544
Q ss_pred c
Q 043923 437 N 437 (469)
Q Consensus 437 ~ 437 (469)
.
T Consensus 362 ~ 362 (366)
T PRK01533 362 D 362 (366)
T ss_pred c
Confidence 3
No 60
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=7.7e-48 Score=385.41 Aligned_cols=358 Identities=31% Similarity=0.515 Sum_probs=295.6
Q ss_pred CeeeeeccccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 39 GIIQMGLAENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 39 ~~i~L~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
++|+|++|.+... .+.+++++++... +.........|+++.|+++||+++|+++++..+ +.++++ +|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 72 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR-------GAATSSSFLGYPPPQGYPELREAIADFLGRRYG--VPVDPEANIL 72 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH-------HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHT--HHTTGGEGEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH-------HhhcccccccCCCchhhHHHHHHHHHHhhhccC--cccccceEEE
Confidence 5799999998886 2233333333211 001124577899999999999999999996665 557888 999
Q ss_pred EeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+++|+++++..++..+ .++||+|+++.|+|+.|...++.. |+++++++++.+++|.+|++.+++.+++...++.++++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 151 (363)
T PF00155_consen 73 VTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLL-GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKA 151 (363)
T ss_dssp EESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHT-TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEE
T ss_pred EecccccchhhhhhcccccccccceecCCcccccccccccc-Cceeeeccccccccccccccccccccccccccccccce
Confidence 9999999999999999 889999999999999999999988 99999999887788999999999999865444335789
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++++|+||||.++|.+++++|+++|++||++||+||+|.++.++...+.+...... ...++++++|+||+|
T Consensus 152 v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--------~~~~vi~~~S~SK~~ 223 (363)
T PF00155_consen 152 VLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLD--------EDDNVIVVGSLSKSF 223 (363)
T ss_dssp EEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHT--------TTSTEEEEEESTTTT
T ss_pred eeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCccccccc--------ccccceeeeeccccc
Confidence 999999999999999999999999999999999999999998776553333223322 335699999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
|++|+|+||+++ ++.+.+.+......+..+++.|.++.+++.+.....++++++++.++++++.+.+.|++.|+.+.++
T Consensus 224 g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 302 (363)
T PF00155_consen 224 GLPGLRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPP 302 (363)
T ss_dssp TSGGGTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHH
T ss_pred cccccccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeec
Confidence 999999999999 5555556665555554588999999999988765456899999999999999999999999999999
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
++|+|+|+.++.. ++.+++++|++++||.+.||..|+. ++++|++++..+++++++++++|
T Consensus 303 ~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 303 EAGFFLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp SBSSEEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred cCccEEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 9999999998853 4557889998878999999999987 88999999556999999999986
No 61
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-48 Score=392.71 Aligned_cols=356 Identities=19% Similarity=0.271 Sum_probs=275.6
Q ss_pred CeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhH-cCCCCCCC-CCcEE
Q 043923 39 GIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEI-RGNKVTFD-TSKIV 115 (469)
Q Consensus 39 ~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~-~~~~~~~~-~~~i~ 115 (469)
++|+|+.|++.+++ +.+.++.... .. .+|+++.|.++||++|++++.++ .+...... .++|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~--------------~~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~ 165 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGI--------------IG-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLF 165 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHH--------------hc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEE
Confidence 57999999999864 5676755442 11 36999999999999999965443 32111111 34999
Q ss_pred EeCChHHHHHHHHHH-----hcCCCCEEEEccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 116 LTAGATSANETLMFC-----LAEPGEAFLLPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 116 ~t~G~~~al~~~~~~-----l~~~gd~Vl~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+|+|+++|+..++.+ +++|||+|++++|+|+.|...+... .|+++++++.+++++|.+|++++++++++
T Consensus 166 vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~----- 240 (527)
T PRK09275 166 AVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP----- 240 (527)
T ss_pred EeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-----
Confidence 999999999999886 6899999999999999999887654 14666777766667899999999987654
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~--~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|+++|||||||.++|.+++++|+++|++ ++++||+||+|.++.+ .+.++... .++++|++
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~----------~~~~~I~v 306 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAV----------LPYNTILV 306 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHh----------CCCCEEEE
Confidence 89999999999999999999999999999965 5999999999998543 23454444 23689999
Q ss_pred ccCccccCCCcceEEEEEecCHHHHH-H---H--------------------------------HHhcc--cccCcHHHH
Q 043923 268 YSLSKDLGLPGFRVGAIYSNDDMVVA-A---A--------------------------------TKMSS--FGLVSSQTQ 309 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG~li~~~~~~~~-~---~--------------------------------~~~~~--~~~~s~~~q 309 (469)
+||||.||++|||+||++++++.+.+ . + .++.. ..+++.+.|
T Consensus 307 ~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q 386 (527)
T PRK09275 307 YSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQ 386 (527)
T ss_pred eehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHH
Confidence 99999999999999999998762211 1 1 12221 234677777
Q ss_pred HH-----HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccc---cCC-------hh
Q 043923 310 YL-----LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR---SNT-------FE 374 (469)
Q Consensus 310 ~~-----~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~---~~~-------~~ 374 (469)
.+ +.+++... +++.+..++.+++|++.+.+.|. .++.+.++.++||+|++++.... ... ..
T Consensus 387 ~a~al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~ 462 (527)
T PRK09275 387 VQMALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNY 462 (527)
T ss_pred HHHHHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccC
Confidence 76 23445442 55788899999999999988872 23444678999999999975321 000 12
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 375 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 375 ~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++.+++.+|++++||.+.||+.|+. .++++|+|++..+++++.++.++|+++++++.+
T Consensus 463 ~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 463 SPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred CHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568899999999999999999985 467899999977899999999999999999887
No 62
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=6.6e-47 Score=381.59 Aligned_cols=354 Identities=21% Similarity=0.360 Sum_probs=284.9
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.+.+..+ ++.+.+.+.+... .....|++..|.++||+++++++.+.++ ++++++ +|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 89 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIA------------GGVNQYPPGPGIPELRAAIAAQRRRRYG--LEYDPDTEVL 89 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 36799999986654 2333444333210 1235799889999999999999988776 345665 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCC-CCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSL-NGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++|+..++.+++++||.|+++.|+|..+...+... |.+++.++++++ ++|.+|++++++.+.+ ++++
T Consensus 90 ~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ 162 (387)
T PRK07777 90 VTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMA-GAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRA 162 (387)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHC-CCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEE
Confidence 9999999999999999999999999999999999888877 999999998765 4688999999988764 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|+++|||||||.+++.+++++|+++|++|++++|+||+|.++.|++..+.++..+.. ..+++++++||||.|
T Consensus 163 v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~ 234 (387)
T PRK07777 163 LIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG--------MRERTVTISSAAKTF 234 (387)
T ss_pred EEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC--------CcCcEEEEeechhhc
Confidence 999999999999999999999999999999999999999988776544444443311 346899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|+||+|+||++++++ +.+.+..... .+..+.+.|.++..++... ..++++.++.++++++.+.+.|++.++++.
T Consensus 235 g~~GlRiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 310 (387)
T PRK07777 235 NVTGWKIGWACGPAP-LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQAKRDRLAAGLAEAGFEVH 310 (387)
T ss_pred cCcCceeEEEecCHH-HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 999999999999655 4444443332 2346778888888888754 456788889999999999999999999999
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT---EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~---~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++++|+|+|++++.... .+..++++++++++||.|.||..|+.. .++++||+++. +++++++++++|+++.-
T Consensus 311 ~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 311 DSAGTYFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALRG 385 (387)
T ss_pred CCCcceEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 99999999999863111 123578888888889999999988642 25689999986 89999999999988653
No 63
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.6e-47 Score=379.44 Aligned_cols=332 Identities=21% Similarity=0.356 Sum_probs=272.8
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+++||+.|+|+.+ ++.+.+++.+. ......|++. +.++||+++|++++ +++++|++|
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~-------------~~~~~~Y~~~-~~~~lr~~ia~~~~--------~~~~~i~it 77 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITEN-------------LDKLVEYPDP-DYLELRKRIASFEQ--------LDLENVILG 77 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHH-------------HHhhhcCCCc-cHHHHHHHHHHHhC--------CChhhEEEC
Confidence 4799999999885 45566666653 1335679865 67999999999985 689999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++.++ .+ +.|++++|+|+.|...+... |++++.++++.+++|.+| +++.+.+.+ +++++++
T Consensus 78 ~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~ 147 (354)
T PRK06358 78 NGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKAF-DAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFL 147 (354)
T ss_pred CCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHHc-CCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEE
Confidence 99999999999987 44 68999999999999988877 999999999866778888 555555533 6899999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+|||||||.+++.+++++|+++|++|+++||+||+|.++.+++.. .+.....+ ..+++|+++||||+||+|
T Consensus 148 ~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~--------~~~~vi~~~S~SK~~gl~ 218 (354)
T PRK06358 148 CNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENET-ISMINYLE--------NFKNLIIIRAFTKFFAIP 218 (354)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccc-hhHHHhcc--------CCCCEEEEEechhhccCc
Confidence 999999999999999999999999999999999999988765532 33333333 447999999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA 356 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~ 356 (469)
|+|+||++++++.+...+.+....+.++.++|.++..++++.. ++++.++.++++++.+.+.|+++ ++++.++.+
T Consensus 219 G~RiG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g 294 (354)
T PRK06358 219 GLRLGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKE----YIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSV 294 (354)
T ss_pred chhheeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHH----HHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcc
Confidence 9999999987666655566665566788999999999997643 46778888899999999999887 778887766
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.|+|++++.. .++++.++ ++||.|+||+.|+..+++++||+++ +++++++++++|.+++
T Consensus 295 -~f~~~~~~~~---------~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 295 -NFIFFKLEKP---------IDLRKELL-KKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred -eEEEEEcCch---------HHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 5899998731 35777766 5699999999996545689999998 7999999999998875
No 64
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2e-46 Score=374.28 Aligned_cols=335 Identities=20% Similarity=0.241 Sum_probs=260.7
Q ss_pred CCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 35 QNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 35 ~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..+.++|+|+.|+|+++ ++.+.+++++. +.....|++.. ..+||++||++++ +++++
T Consensus 19 ~~~~~~i~l~~~~n~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~~~ 76 (360)
T PRK07392 19 CPPDAILDFSASINPLGPPESVIAAIQSA-------------LSALRHYPDPD-YRELRLALAQHHQ--------LPPEW 76 (360)
T ss_pred CCcccEEEeCCcCCCCCCCHHHHHHHHHH-------------HHHhhcCCCcC-HHHHHHHHHHHhC--------cChhh
Confidence 34557899999999985 46676666653 12356798764 5899999999994 68999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCc---ccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGF---QITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~ 190 (469)
|++|+|+++++..++.++. +||.|++++|+|..|...++.. |++++.+|++.++++ ..+++.+++.. .
T Consensus 77 I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~ 147 (360)
T PRK07392 77 ILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRAF-GATVKELPLPLDQPSPGLTLRLQTLPPQL-------T 147 (360)
T ss_pred EEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHc-CCeEEEEecccccCCcccccCHHHHHHhc-------c
Confidence 9999999999999998875 6889999999999999999887 999999999765554 24455554332 2
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
++++++++|||||||.+++.+++.+ +++++++ +|+||+|.++.+++. ..+.....+ ..+++++++||
T Consensus 148 ~~~~~~l~nP~NPTG~~~~~~~l~~---l~~~~~~-~IiDE~y~~~~~~~~-~~s~~~~~~--------~~~~vi~i~S~ 214 (360)
T PRK07392 148 PNDGLLLNNPHNPTGKLWSREAILP---LLEQFAL-VVVDEAFMDFLPPDA-EQSLIPCLA--------EYPNLIILRSL 214 (360)
T ss_pred CCCEEEEeCCCCCCCCCcCHHHHHH---HHHHCCE-EEEECchhhhccCcc-ccchHHHhh--------cCCCEEEEEec
Confidence 6789999999999999999887555 4557785 666999999766543 234444433 34789999999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI 349 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~ 349 (469)
||+||+||+|+||++++++.+ +.+.+....+.++.++|.++.++|++..+ .+..++.++++++.+.+.|+++ |+
T Consensus 215 SK~~~l~GlRiG~~v~~~~~~-~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (360)
T PRK07392 215 TKFYSLPGLRLGYAIAHPDRL-QRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREALFQGLASLPGL 289 (360)
T ss_pred hhhhcCCchheeeeeCCHHHH-HHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999965544 44555555566899999999999987554 5556677888999999999887 77
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+.+ .+|+|+|++++. ++.+++.++++++||.|.||..|+..+++|+||+++. .++.+++.+.|.+++.
T Consensus 290 ~~~~-~~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 290 TPLP-SAANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred EECC-CCCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 7765 677999998863 2346777878888999999999976567899999984 5556666666666543
No 65
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=3e-46 Score=402.27 Aligned_cols=368 Identities=18% Similarity=0.283 Sum_probs=284.6
Q ss_pred CCCCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 32 DEVQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 32 ~~~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
..+..+.++|+|+.|+|+++ ++.+.+++.+.. .. ..+ ..|++++++++++++.+++| ++.+
T Consensus 691 ~~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal-------------~~-~~~--s~g~pdlr~aLa~~la~~~G--v~~d 752 (1082)
T PLN02672 691 VSGSQESSLIHMDVDESFLPVPSAVKASIFESF-------------VR-QNI--SESETDPRPSILQFIKSNYG--FPTD 752 (1082)
T ss_pred CcccCCCCEEEEeCCCCCCCCCHHHHHHHHHHH-------------hh-cCC--CCCChHHHHHHHHHHHHHhC--cCCC
Confidence 33444568999999999996 466777776531 11 112 34568899999999998877 3444
Q ss_pred C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 T-SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+ ++|++|+|+++++..++.+++++||.|+++.|+|+.|...++.. |++++.+|++.+++|.+|++.+++++++.
T Consensus 753 ~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~-Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~---- 827 (1082)
T PLN02672 753 SCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFL-KANFRRIPTKSSDGFKLTAKTLASTLETV---- 827 (1082)
T ss_pred CCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhccC----
Confidence 3 58999999999999999999999999999999999999999988 99999999986678999999999988531
Q ss_pred CceeEEEEecCC-CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc--cchhhhhhccccccCCcCCeEEE
Q 043923 190 LKVKGVLVTNPS-NPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF--VSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~--~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
+.++|+++||+ ||||.+++.+++++|+++|++||++||+||+|+++.|++... .++.+...... ......++++
T Consensus 828 -~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~--~~sks~nVIv 904 (1082)
T PLN02672 828 -KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLK--SSNPSFAVAL 904 (1082)
T ss_pred -CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhc--cccCCceEEE
Confidence 34578999997 999999999999999999999999999999999888865321 12222211100 0000137999
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHH---hc--CchhhHHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSAL---LS--DKKFTQNYISENKKRLKQRHRKLV 341 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~---l~--~~~~~~~~~~~~~~~l~~~~~~l~ 341 (469)
++||||.|++||+|+||++++++.+.+.+.+...........|.++.++ +. +..| .+++.+.++.++++++++.
T Consensus 905 L~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 905 LGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred EeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999977756665554433322333344443333 32 3445 6778888999999999999
Q ss_pred HHHHhcCCceecCCceEEEEEecccccc----cC-------ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 342 SGLEKAGISCLKSNAGLFCWVDMRHLLR----SN-------TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 342 ~~L~~~g~~v~~~~~g~~~~v~~~~~~~----~~-------~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
+.|+++|+++.+|++|||+|++++.... .+ ...++.++++++++++||.+.||+.|+. ++|+||+++
T Consensus 984 e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa 1061 (1082)
T PLN02672 984 ETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFA 1061 (1082)
T ss_pred HHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEec
Confidence 9999999999999999999998753211 00 0123557899999888999999988864 789999999
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 043923 411 NMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 411 ~~~~e~i~~~l~~L~~~l~ 429 (469)
. +++++++++++|+++++
T Consensus 1062 ~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1062 L-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred C-CHHHHHHHHHHHHHHHH
Confidence 5 88999999999999765
No 66
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-46 Score=347.33 Aligned_cols=360 Identities=21% Similarity=0.331 Sum_probs=306.7
Q ss_pred CeeeeeccccccC-----hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 39 GIIQMGLAENQLS-----FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 39 ~~i~L~~~~n~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
.+|.|+.|.+..- .+...+++..... ......|.|..|....|+++|+|+.+... -.+++++
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~-----------Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~--~kl~a~D 128 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALR-----------SGKGNGYAPSVGILPARRAVAEYLNRDLP--NKLTADD 128 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHh-----------cCCCCCcCCccccHHHHHHHHHHhhcCCC--CccCcCc
Confidence 6899999877652 1334444444211 14567899999999999999999886654 3478999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|.++||++++.+|.+||..|++|.|+|+-|...+... |+++..+.+-++.+|.+|++.++..+++ ++.
T Consensus 129 V~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~-~lEVR~ydlLPe~~weIDL~~veal~DE------NT~ 201 (447)
T KOG0259|consen 129 VVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYS-GLEVRYYDLLPEKDWEIDLDGVEALADE------NTV 201 (447)
T ss_pred eEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhc-CceeEeecccCcccceechHHHHHhhcc------Cee
Confidence 999999999999999999999999999999999888777766 9999999998889999999999999887 999
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+++++||+||+|.+++.+-|++|++.|+++++.||.||+|.+++|++.++.++.++... -.++.++|+||.
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssi---------VPVitlggisKr 272 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSI---------VPVITLGGISKR 272 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhcccc---------CceEeecccccc
Confidence 99999999999999999999999999999999999999999999999999998888542 468999999999
Q ss_pred cCCCcceEEEEEecCHH-------HHHHHHHhccc-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 274 LGLPGFRVGAIYSNDDM-------VVAAATKMSSF-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~-------~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
|=.||||+||++..+.. +.+.+.++... ..++++.|.|+-.+|.... +++.......++.+.+.-.+.|+
T Consensus 273 W~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp--~efF~k~~~~lk~na~l~y~~Lk 350 (447)
T KOG0259|consen 273 WIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP--EEFFDKKLSFLKSNADLCYSRLK 350 (447)
T ss_pred cccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh--HHHHHHHHHHHHhhHHHHHHHHh
Confidence 99999999999875432 22344443332 3477899999999998765 77889999999999999999999
Q ss_pred hc-CCc-eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 043923 346 KA-GIS-CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQR 423 (469)
Q Consensus 346 ~~-g~~-v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~ 423 (469)
+. ++. ...|++.+|+|+++.-..- ..++++.+++.+|.+|..+.+.||..|+. ++|+|++++ +..+.++++..|
T Consensus 351 ~IP~l~cp~kPeg~mylmv~l~~s~~-~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~i~-~~~~~leea~~R 426 (447)
T KOG0259|consen 351 DIPCLTCPVKPEGCMYLMVKLNLSLF-PDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIVIT-VEEEMLEEAFSR 426 (447)
T ss_pred cCCCcccCcCCCcceEEEeccchhhh-ccccccHHHHHHHhhhcceEEeccccccC--CCeEEEEEc-cChHHHHHHHHH
Confidence 88 677 5689999999999874211 23466789999999999999999999985 899999998 599999999999
Q ss_pred HHHHHHhhcc
Q 043923 424 LKAFVDSITT 433 (469)
Q Consensus 424 L~~~l~~~~~ 433 (469)
|+++++++-+
T Consensus 427 ik~Fc~RH~~ 436 (447)
T KOG0259|consen 427 IKEFCDRHSK 436 (447)
T ss_pred HHHHHHhhhh
Confidence 9999998875
No 67
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.8e-46 Score=370.25 Aligned_cols=315 Identities=15% Similarity=0.245 Sum_probs=251.0
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
.+|+|+.|+|++++ ......||+.. ..+||+++|++++ +++++|++|+
T Consensus 17 ~~i~l~~Nenp~~~-----------------------~~~~~~Yp~~~-~~~lr~~ia~~~~--------~~~~~I~it~ 64 (332)
T PRK06425 17 RIIDFSANINDFMD-----------------------IGDISIYPEIS-YTDIEDQIKIYTQ--------GLKIKVLIGP 64 (332)
T ss_pred CEEEeccccCCCcC-----------------------hhhcccCcCcC-HHHHHHHHHHHhC--------CCcceEEECC
Confidence 67999999999851 13356798764 6999999999997 6899999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~ 198 (469)
|+++++..++.. +++|+ |++++|+|+.|...++.. |++++.+|++. +.+|.+.+++ .+++++++|
T Consensus 65 Gs~~~l~~~~~~-~~~~~-vv~~~P~y~~y~~~~~~~-G~~v~~vp~~~---~~~~~~~l~~---------~~~k~v~l~ 129 (332)
T PRK06425 65 GLTHFIYRLLSY-INVGN-IIIVEPNFNEYKGYAFTH-GIRISALPFNL---INNNPEILNN---------YNFDLIFIV 129 (332)
T ss_pred CHHHHHHHHHHH-hCCCc-EEEeCCChHHHHHHHHHc-CCeEEEEeCCc---ccCcHHHHhh---------cCCCEEEEe
Confidence 999999999974 57775 777799999999999988 99999999863 3345444432 178999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc
Q 043923 199 NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG 278 (469)
Q Consensus 199 ~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 278 (469)
|||||||.+++.+++++|+++|++++++||+||+|.++.+++. .+...+.+ ..+++|+++||||+||+||
T Consensus 130 nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~--~~~~~~~~--------~~~~vi~~~SfSK~~~l~G 199 (332)
T PRK06425 130 SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA--EEDVLLNR--------SYGNVIIGRSLTKILGIPS 199 (332)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc--hhHHHHhc--------cCCCEEEEeecHHhcCCch
Confidence 9999999999999999999999999999999999999765432 24444433 3478999999999999999
Q ss_pred ceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceE
Q 043923 279 FRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGL 358 (469)
Q Consensus 279 lRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~ 358 (469)
+|+||++++++ +.+.+.+....+.++.+++.+ +..... ..++++.++.++++++++.+.|+++|+++..+.+|+
T Consensus 200 lRiGy~v~~~~-li~~l~~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~ 273 (332)
T PRK06425 200 LRIGYIATDDY-NMKISRKITEPWSVCDPAIDF----IRSIDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSAN 273 (332)
T ss_pred hhheeeecCHH-HHHHHHHcCCCCccCHHHHHH----HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCce
Confidence 99999999655 555555555555455544333 322232 456677889999999999999999998876555678
Q ss_pred EEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 359 FCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 359 ~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
|+|++++. ..++.+.++ ++||.|+||+.|+..+++|+||+++ +++++++++++|++++
T Consensus 274 f~~~~~~~---------~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 274 FITFMIPD---------AHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEEEEcCC---------HHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 99999861 235677776 4699999999997555689999998 6899999999999875
No 68
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-46 Score=373.99 Aligned_cols=334 Identities=19% Similarity=0.274 Sum_probs=268.7
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.|+|+++ ++.+.+++.+.. .....|++. ++.+||+++|++++ +++++|+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~ 76 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNL-------------DCAERYPDV-EYRHLHQALARHHQ--------VPASWIL 76 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHH-------------HhcccCcCc-cHHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999985 466677666531 223468765 68999999999985 6899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.++ .+|+ +++++|+|..|...++.. |++++.+|++.+++|.+| +++.+.+.+ +++++
T Consensus 77 it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v 146 (356)
T PRK08056 77 AGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQV-GCEIRRYSLREADGWQLT-DAILEALTP------DLDCL 146 (356)
T ss_pred ECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHc-CCeEEEEecccccCCCcc-HHHHHhccC------CCCEE
Confidence 9999999999999887 6776 778899999999888887 999999999766678777 344444432 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+++..+.+ ... ..+++++++||||+||
T Consensus 147 ~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~---~~~--------~~~~~i~~~S~SK~~~ 215 (356)
T PRK08056 147 FLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIP---QLA--------DNPHLWVLRSLTKFYA 215 (356)
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHH---Hhc--------cCCCEEEEEechhhcc
Confidence 99999999999999999999999999999999999999987654422222 222 2368999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS 354 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~ 354 (469)
++|+|+||++++++.+.+.+.+....+.++.+.|.++..++++..+ .++.++.++++++.+.+.|+++ ++.+.++
T Consensus 216 ~~G~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 291 (356)
T PRK08056 216 IPGLRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAY----QQATWQWLAEEGARFYQALCALPLLTVWPG 291 (356)
T ss_pred CcchhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEEcCC
Confidence 9999999999866555555655555666788899999999976444 6777888999999999999887 7777655
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+|+|+|++++.. ..+++..++ ++||.|++|..|....++|+||+++ ++++++.++++|+++++
T Consensus 292 -~~~~~~~~~~~~--------~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 292 -RANYLFLRCERP--------DIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred -CCcEEEEEcCCC--------hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 568999998731 225667666 5799999999996555679999998 68999999999988764
No 69
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.4e-46 Score=378.41 Aligned_cols=345 Identities=17% Similarity=0.240 Sum_probs=269.9
Q ss_pred CCeeeeecccc---cc-Ch--HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAEN---QL-SF--DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n---~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
+++|||+.|.+ .. .+ +.+.+++.+.... .....|++..|.++||+++|+++.+..+ ..+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~ 92 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-----------ETTKNYLPIEGLAAYRQAVQELLFGADS--PALAA 92 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc-----------ccCCCcCCCCCCHHHHHHHHHHhcCCCC--ccccc
Confidence 37899999953 22 22 4566666654211 2345799999999999999999975433 22478
Q ss_pred CcE--EEeCChHHHHHHHHHHh--cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKI--VLTAGATSANETLMFCL--AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++| ++|+|+++|+..+++++ +++||+|++++|+|+.|...++.. |++++.+|+...++|.+|++.+++++++.
T Consensus 93 ~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-- 169 (396)
T PRK09257 93 GRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAA-GLEVKTYPYYDAATKGLDFDAMLADLSQA-- 169 (396)
T ss_pred CeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHc-CCcEEEEeccccccCccCHHHHHHHHHhC--
Confidence 887 99999999999998766 589999999999999999999987 99999999843345789999999888642
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC-CCCccchhhhhhccccccCCcCCeEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS-SPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.++..+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.++ +....++..+.+ ..+++++
T Consensus 170 -~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~--------~~~~vi~ 240 (396)
T PRK09257 170 -PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA--------AGLELLV 240 (396)
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh--------cCCcEEE
Confidence 123566677999999999999999999999999999999999999987654 222334444422 3368999
Q ss_pred EccCccccCCCcceEEEEEe--cC-HHHHHH---HHHh--cccccCcHHHHHHHHHHhcCchh---hHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYS--ND-DMVVAA---ATKM--SSFGLVSSQTQYLLSALLSDKKF---TQNYISENKKRLKQ 335 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~--~~-~~~~~~---~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~ 335 (469)
++||||+|+++|+|+||+++ ++ +.+... +... ..+++++.+.|.++..++.++.+ ..+++++.++.+++
T Consensus 241 i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 320 (396)
T PRK09257 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKA 320 (396)
T ss_pred EEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999989999999984 33 222222 2221 23344678899999999988643 26778889999999
Q ss_pred HHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 336 RHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 336 ~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
+++.+.+.|++++ +++..+++|+|+|++++. +++.++++++||.+.|. + ||+++.
T Consensus 321 rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------~~~~~l~~~~~V~~~p~--------~--ri~~~~ 379 (396)
T PRK09257 321 MRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTP-----------EQVDRLREEFGVYAVGS--------G--RINVAG 379 (396)
T ss_pred HHHHHHHHHHhcCCCCCcccccccceEEEecCCCH-----------HHHHHHHHcCCEEEcCC--------C--eEEEee
Confidence 9999999999874 667789999999999862 35677888999999862 2 999987
Q ss_pred CCHHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l 428 (469)
++++++++++++|++++
T Consensus 380 ~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 380 LNESNIDYVAEAIAAVL 396 (396)
T ss_pred CCHHHHHHHHHHHHhhC
Confidence 79999999999998753
No 70
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-46 Score=371.18 Aligned_cols=328 Identities=16% Similarity=0.266 Sum_probs=263.6
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.+.++|+|+.|+|+++ ++.+.+++.+.. .....|++ .|.++||+++|++++ +++++|
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~I 85 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIREAA-------------ERVHSYPK-ASHADLTAALADRWD--------VSPEQV 85 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHHHH-------------hhhhcCCC-CCHHHHHHHHHHHhC--------CCcceE
Confidence 3557999999999985 455666665531 23457875 578999999999985 689999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++++++++||.|++++|+|..|...+... |.+++.++++.+++|.++++++.+... ++++
T Consensus 86 ~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~k~ 157 (357)
T PRK14809 86 WLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH-HGEVREYPVSKADDFEQTADTVLDAYD-------GERI 157 (357)
T ss_pred EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEEecccCcCCCcCHHHHHHhhc-------CCcE
Confidence 99999999999999999999999999999999887777766 999999998765678888877766542 6789
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|+++|||||||.++|.+++++|+++|++ +++||+||+|.++.+.. +.....+ ..+++++++||||.|
T Consensus 158 i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~----~~~~~~~--------~~~~vi~~~SfSK~~ 224 (357)
T PRK14809 158 VYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP----SAVALVE--------ERDDVAVLRTFSKAY 224 (357)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc----hhHHHHh--------hCCCEEEEecchhHh
Confidence 9999999999999999999999999875 78999999999865432 2222222 347899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
|+||+|+||++++++ +.+.+.+....+.++.+.|.++.++|.+. +++++.++.++++++.+.+.|.... . +
T Consensus 225 ~~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~r~~l~~~L~~~~---~-~ 295 (357)
T PRK14809 225 GLAGLRLGYAVVPEE-WADAYARVNTPFAASELACRAGLAALDDD----EHVERTVETARWAREYIREELDAPT---W-E 295 (357)
T ss_pred cCcchhheeeecCHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHhcCcc---C-C
Confidence 999999999999655 44455555555567889999998988763 4577788888889999999887542 2 4
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+|+|+|++++. ..++++.+ +++||.|+||+.|+. ++++||+++ +++++++++++|+++++
T Consensus 296 ~~g~f~~~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 296 SAGNFVLAEVGD---------ASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred CCCCEEEEECCC---------HHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 567999998852 23566664 577999999999863 579999997 57999999999999875
No 71
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-46 Score=377.30 Aligned_cols=346 Identities=15% Similarity=0.206 Sum_probs=268.2
Q ss_pred CCeeeeeccccc-c-ChH----HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAENQ-L-SFD----LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n~-~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
+++|||+.|.++ . ++. .+.+++.+... ......|++..|.++||+++|+++.+..+ ..+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~ 95 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE-----------KNLDKEYLPIEGLQSFIEAAQKLLFGEAS--YALAE 95 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhcc-----------ccCCCCCCCCCCCHHHHHHHHHHhcCCCc--ccccc
Confidence 477999999752 3 222 33444332110 02346799999999999999999864432 33678
Q ss_pred CcEE--EeCChHHHHHHHHH---HhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 112 SKIV--LTAGATSANETLMF---CLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 112 ~~i~--~t~G~~~al~~~~~---~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|+ .|.|+++++..++. +++++||+|++++|+|+.|...++.. |++++.+|+..+++|.+|++.+++++.+.
T Consensus 96 ~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~l~~~~~~~~d~~~l~~~~~~~- 173 (404)
T PTZ00376 96 KRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSA-GLNVKEYRYYDPKTKGLDFDGMLEDLRTA- 173 (404)
T ss_pred CeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCceeeccccCcccCCcCHHHHHHHHHhC-
Confidence 8998 59999999988875 56899999999999999999999987 99999999954456889999999988642
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
.++.++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ...++..+.. ..+++
T Consensus 174 --~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~--------~~~~v 243 (404)
T PTZ00376 174 --PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE--------RGVEF 243 (404)
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh--------cCCcE
Confidence 12456778899999999999999999999999999999999999999877531 2223333322 33589
Q ss_pred EEEccCccccCCCcceEEEEE---ecCHH---HHHHHHHh-cc-cccCcHHHHHHHHHHhcCchhhH---HHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIY---SNDDM---VVAAATKM-SS-FGLVSSQTQYLLSALLSDKKFTQ---NYISENKKRL 333 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li---~~~~~---~~~~~~~~-~~-~~~~s~~~q~~~~~~l~~~~~~~---~~~~~~~~~l 333 (469)
++++||||+||++|+|+||++ ++++. +.+.+.+. .. +++++.+.|.++..+|.+..+.+ +++++.++++
T Consensus 244 i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (404)
T PTZ00376 244 LVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRI 323 (404)
T ss_pred EEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999984 44432 22222222 22 33457789999999998865433 3456667889
Q ss_pred HHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 334 KQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 334 ~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+++++.+.+.|++++ +.+..+++|+|+|++++. +++++|++++||.+.|| + ||++
T Consensus 324 ~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~-----------~~~~~L~~~~~v~v~p~--------~--Ris~ 382 (404)
T PTZ00376 324 QNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTK-----------EQVERLIEKYHIYLLDN--------G--RISV 382 (404)
T ss_pred HHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCH-----------HHHHHHHHhCCEeecCC--------C--eEEE
Confidence 999999999999875 456678999999998852 57888998889999987 1 9999
Q ss_pred ecCCHHHHHHHHHHHHHHHH
Q 043923 410 ANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.++++++++++++|++++.
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 383 AGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred eccCHHhHHHHHHHHHHHHh
Confidence 86799999999999999875
No 72
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.3e-45 Score=369.08 Aligned_cols=335 Identities=22% Similarity=0.354 Sum_probs=265.2
Q ss_pred CCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCC
Q 043923 34 VQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT-FDT 111 (469)
Q Consensus 34 ~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~ 111 (469)
..++.++|+|+.+.+..+ ++.+.+++.+. .....|++..|.++||+++|+++.++++ ++ +++
T Consensus 23 ~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~~--~~~~~~ 86 (364)
T PRK07865 23 AAHPDGIVDLSVGTPVDPVPPVIQEALAAA--------------ADAPGYPTTAGTPELREAIVGWLARRRG--VTGLDP 86 (364)
T ss_pred HhcCCCEEEcCCCCCCCCCCHHHHHHHHHH--------------HhhCCCCCccCCHHHHHHHHHHHHHHcC--CCCCCc
Confidence 344557899999976554 35666666542 1124799989999999999999988776 43 679
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 112 SKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
++|++|+|+++++..++.++ +++||.|++++|+|+.|...+... |++++.++. +++++. .
T Consensus 87 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~---------~~~l~~---------~ 147 (364)
T PRK07865 87 AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLA-GATVVRADS---------LTELGP---------Q 147 (364)
T ss_pred ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhc-CCEEEecCC---------hhhCCc---------c
Confidence 99999999999999988888 799999999999999999888877 999988752 222221 1
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhh-hhccccccCCcCCeEEEEcc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEI-LKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|+++|||||||.+++.+++++|+++|++||++||+||+|.++.+++.. .+.... .. .+..+++++++|
T Consensus 148 ~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~------~~~~~~~i~~~S 220 (364)
T PRK07865 148 RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEP-VSILDPRVC------GGDHTGLLAVHS 220 (364)
T ss_pred cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCC-Ccccccccc------CCccceEEEEee
Confidence 7899999999999999999999999999999999999999999987665432 221110 00 013468999999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|||.||+||+|+||++++++.+ +.+.... ..++++++.|.++.++|.+. +++++.++.++++++.+.+.|++.
T Consensus 221 ~SK~~~~~GlRiG~i~~~~~~~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 221 LSKQSNLAGYRAGFVAGDPALV-AELLEVRKHAGMMVPAPVQAAMVAALGDD----AHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred chhccCCCceeeEEEecCHHHH-HHHHHHHHhcCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999965544 4443322 23457889999999999874 346778889999999999999999
Q ss_pred CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
|+.+..+++|+|+|+.++. +..+++.. ++++||.+.||..|+...++++||+++. +++++++++++|+
T Consensus 296 g~~~~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 296 GFRVDHSEAGLYLWATRGE--------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred CCcccCCCccEEEEEeCCC--------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 9988889999999998742 12234444 4577999999998876567899999985 8999999999985
No 73
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-46 Score=371.94 Aligned_cols=335 Identities=18% Similarity=0.254 Sum_probs=271.6
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.|+|++. ++.+.+++.+.. .....|++..| .+||+++|++++ +++++|+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~-------------~~~~~Y~~~~g-~~lr~~ia~~~~--------~~~~~i~ 92 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIA-------------ELLRLYPDPQG-RALREAIAARTG--------VPADRII 92 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 447899999999984 566777766531 23567998888 599999999985 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|+++.|+|..+...++.. |++++.++++. ++.+|++++++.+++ +++++
T Consensus 93 ~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v 163 (371)
T PRK05166 93 LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMM-GARVERVTVTP--DLGFDLDALCAAVAR------APRML 163 (371)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEE
Confidence 9999999999999999999999999999999998888877 99999999874 467899999988865 67899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|+++|++ +++||+||+|.++.++. ...+......+ ..+++++++||||.||
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~-------~~~~vi~i~SfSK~~~ 234 (371)
T PRK05166 164 MFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD-DYPSALTLLKA-------RGLPWIVLRTFSKAYG 234 (371)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc-CcccHHHHHhh-------cCCCEEEEeechHhhh
Confidence 999999999999999999999999874 88999999999876433 23344444331 2357999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||++++++.+.+.+.+....+.++.++|.++.+++.+.+ ++++.++.++++++.+.+.|++.|+++.+ .
T Consensus 235 l~GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~ 309 (371)
T PRK05166 235 LAGLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEE----HLAKGVALALAERERLKKELAEMGYRIAP-S 309 (371)
T ss_pred cchhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCcCeeCC-C
Confidence 999999999876677766666665566688999988888887644 46777788888999999999998887654 4
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+|+|+|++++. ++.++++.++ ++||.++||..++ .++++||+++ ++++++.++++|+.++.
T Consensus 310 ~g~fl~~~~~~--------~~~~l~~~l~-~~gi~v~p~~~~~--~~~~iRi~~~--~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 310 RANFLFFDARR--------PASAVAEALL-RQGVIVKPWKQPG--FETFIRVSIG--SPEENDHFVAALDKVLE 370 (371)
T ss_pred cCCEEEEeCCC--------CHHHHHHHHH-HCCeEEecCCCCC--CCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 56899999752 1335777776 4699999997654 3789999998 57778888888877643
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=369.47 Aligned_cols=341 Identities=19% Similarity=0.250 Sum_probs=264.7
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
.+++|+.|+|+++ ++.+.+++.+.... ......|++ .|.++||++||++++++++.++.+++++|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQ----------GIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh----------cccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEc
Confidence 5899999999985 46677776653110 011356875 69999999999999887654466889999999
Q ss_pred CChHHHHHHHHHHhcCCCC-EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 118 AGATSANETLMFCLAEPGE-AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd-~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+|+++++..++.+++.+|| .|++++|+|..|...++.. |++++.++++. ++|.+|++++++++++.. .+++++|+
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~ 173 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTL-GIPVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVF 173 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEE
Confidence 9999999988888877886 8999999999999999887 99999999864 458899999999886311 12789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++|||||||.++|.+++++++++| ++++||+||+|.++.+ . ..+..+ . ..+++|+++||||+||+
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~--~--~~~~~~-~--------~~~~~ivi~SfSK~~g~ 238 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQ--T--TLVGEL-A--------QHPNWVILRTFSKAFRL 238 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCc--c--chHHHH-h--------cCCCEEEEEecchhccC
Confidence 999999999999999999999876 4999999999998532 1 122222 2 23678899999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN 355 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~ 355 (469)
||+|+||++++++ +.+.+.+....+.++++.|.++..++.+. +.+.+..++.+++ ++.+.+.|+++ ++.+. +.
T Consensus 239 ~GlRiG~~v~~~~-l~~~l~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~ 312 (374)
T PRK02610 239 AAHRVGYAIGHPE-LIAVLEKVRLPYNLPSFSQLAAQLALEHR---QELLAAIPEILQE-RDRLYQALQELPQLRVW-PS 312 (374)
T ss_pred cccceeeeecCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CC
Confidence 9999999999554 55555555555568899999999999764 3445555555554 67788888877 66654 67
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+|+|+|++++... ++.+++..+ .++||.|+++ ++++||+++ +++++++++++|+++++.+
T Consensus 313 ~g~f~~~~l~~~~------~~~~~~~~l-~~~gi~v~~~-------~~~lRls~~--~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 313 AANFLYLRLSQDA------ALAALHQAL-KAQGTLVRHT-------GGGLRITIG--TPEENQRTLERLQAALTQL 372 (374)
T ss_pred cceEEEEeCCCCC------CHHHHHHHH-HHCCEEEEeC-------CCeEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 7899999997532 233566655 5779999864 468999998 4678999999999998754
No 75
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.2e-45 Score=376.46 Aligned_cols=353 Identities=19% Similarity=0.289 Sum_probs=269.6
Q ss_pred CeeeeeccccccChH-HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHH-HHHhHcCCCCCCCCC--cE
Q 043923 39 GIIQMGLAENQLSFD-LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVE-FMSEIRGNKVTFDTS--KI 114 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~-~l~~~~~~~~~~~~~--~i 114 (469)
++|+|+.+++.++++ .+.++.... . ..+|+++.|..++++++++ ++++.++.. ..+++ +|
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~--------------~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~-~~~~~~~~V 158 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGI--------------I-GDNYPVPDRMLPHSEKIVHQYLIQEMCGN-KPPPGEFDL 158 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHh--------------h-cCCCCCCCCCHHHHHHHHHHHHHhhccCC-CCCCCcCeE
Confidence 579999999998754 454444332 1 1269877777888888885 666554321 12334 89
Q ss_pred EEeCChHHHHHHHHHH-----hcCCCCEEEEccCCCcChHHHHhhh-CCCEEEEeeccCCCC-----cccCHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFC-----LAEPGEAFLLPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNG-----FQITETAIEEAYQ 183 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~-----l~~~gd~Vl~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~-----~~~d~~~l~~~i~ 183 (469)
++|+|+++|+..++.+ +++|||+|++++|+|+.|...+... .|++++.+++++.++ |.+|+++++++++
T Consensus 159 ~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~ 238 (521)
T TIGR03801 159 FAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD 238 (521)
T ss_pred EEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC
Confidence 9999999999999887 7899999999999999999886653 278888888865433 9999999988765
Q ss_pred HHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccCCCCccchhhhhhccccccCCcC
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
+ ++++++++|||||||.++|.+++++|+++|++| +++||+||+|.++.+ .+.++.+. .+
T Consensus 239 ~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~----------~~ 299 (521)
T TIGR03801 239 P------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE----------LP 299 (521)
T ss_pred C------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh----------CC
Confidence 4 899999999999999999999999999999987 999999999998643 33455444 23
Q ss_pred CeEEEEccCccccCCCcceEEEEEecCHHHH------------HHH------------------------HHhcc--ccc
Q 043923 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVV------------AAA------------------------TKMSS--FGL 303 (469)
Q Consensus 262 ~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~------------~~~------------------------~~~~~--~~~ 303 (469)
+++|+++||||.||++|||+||++++++.+. +.+ ++... ..+
T Consensus 300 ~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g 379 (521)
T TIGR03801 300 YNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAG 379 (521)
T ss_pred CCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCC
Confidence 6899999999999999999999999765221 111 11111 123
Q ss_pred CcHHHHH--H---HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eecCCceEEEEEeccccccc---CC-
Q 043923 304 VSSQTQY--L---LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS--CLKSNAGLFCWVDMRHLLRS---NT- 372 (469)
Q Consensus 304 ~s~~~q~--~---~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~--v~~~~~g~~~~v~~~~~~~~---~~- 372 (469)
++.+.|. + +.+++... +.+.+..++.+++|++.+.+.| |+. +.++.+++|+|++++..... ..
T Consensus 380 ~s~p~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f 453 (521)
T TIGR03801 380 LSTPQQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEF 453 (521)
T ss_pred CCcHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHH
Confidence 5666665 3 34455432 5678889999999999999888 444 45788999999999853210 00
Q ss_pred ------hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 373 ------FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 373 ------~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++.+++.+|++++||.+.||..|+.. .+++|||++..+++++.++.++|+++++++.+
T Consensus 454 ~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 454 SSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0135689999999999999999999863 56899999877999999999999999988765
No 76
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2e-45 Score=366.58 Aligned_cols=344 Identities=22% Similarity=0.358 Sum_probs=267.7
Q ss_pred hhhcCCCCCCCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHc
Q 043923 25 EYEKNPYDEVQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIR 103 (469)
Q Consensus 25 ~~~~~~~~~~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~ 103 (469)
.+..-......++.++|+|+.|.+..+ ++.+.+++.+. .....|++..|.++||+++++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~ 73 (357)
T TIGR03539 8 SLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAA--------------ADAPGYPQTWGTPELREAIVDWLERRR 73 (357)
T ss_pred HHHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHH--------------HhhCCCCcccCCHHHHHHHHHHHHHhc
Confidence 333333344456677899999977655 45566666542 223579999999999999999998876
Q ss_pred CCCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHH
Q 043923 104 GNKVT-FDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEA 181 (469)
Q Consensus 104 ~~~~~-~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 181 (469)
+ ++ +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...+... |++++.++ +++.+..
T Consensus 74 ~--~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~---------~~~~l~~- 140 (357)
T TIGR03539 74 G--VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLA-GATPVAAD---------DPTELDP- 140 (357)
T ss_pred C--CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhc-CCEEeccC---------ChhhcCc-
Confidence 6 43 78899999999999999998888 799999999999999998888776 99988774 2222221
Q ss_pred HHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcC
Q 043923 182 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 182 i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
.++++|+++||+||||.++|.+++++|+++|++||++||+||+|.++.|++.. .+... +.. .....
T Consensus 141 --------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~--~~~---~~~~~ 206 (357)
T TIGR03539 141 --------VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRP-VSILD--PRV---CGGDH 206 (357)
T ss_pred --------cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCC-cccee--ccc---CCCcc
Confidence 27899999999999999999999999999999999999999999987665432 22111 000 00123
Q ss_pred CeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHH
Q 043923 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRK 339 (469)
Q Consensus 262 ~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~ 339 (469)
+++++++||||.||++|+|+||++++++ +.+.+.... ..++++.+.|.++..+|.+. ++++..++.+++++++
T Consensus 207 ~~vi~~~S~SK~~~~~G~R~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~ 281 (357)
T TIGR03539 207 TGLLAVHSLSKRSNLAGYRAGFVAGDPA-LVAELLTVRKHAGLMVPAPVQAAMVAALGDD----GHVAEQKARYAARRAQ 281 (357)
T ss_pred ccEEEEeccccccCCCceeEEEEecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHH
Confidence 6899999999999999999999998654 444443333 23457889999999999763 3467778889999999
Q ss_pred HHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHH
Q 043923 340 LVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKL 419 (469)
Q Consensus 340 l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~ 419 (469)
+.+.|.+.|+.+.++++|+|+|++++. +..++.+.+ .++||.|.||..|+...++++||+++. +++++++
T Consensus 282 ~~~~L~~~g~~~~~p~~~~~~~~~~~~--------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~ 351 (357)
T TIGR03539 282 LKPALEKAGFRIDHSEAGLYLWATRGE--------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAA 351 (357)
T ss_pred HHHHHHHcCCCCcCCCccEEEEEECCC--------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHH
Confidence 999999989998899999999999863 122455554 577999999998876567899999996 7899999
Q ss_pred HHHHH
Q 043923 420 SMQRL 424 (469)
Q Consensus 420 ~l~~L 424 (469)
++++|
T Consensus 352 ~~~~l 356 (357)
T TIGR03539 352 AVARL 356 (357)
T ss_pred HHHhh
Confidence 99886
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-46 Score=369.51 Aligned_cols=328 Identities=18% Similarity=0.265 Sum_probs=266.6
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
++|+|+.|+|+++ ++.+.+++.+.. ... .|.+..|.++||+++|++++ +++++|++|
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~-------------~~~-~~~p~~g~~~lr~~ia~~~~--------~~~~~i~~t 87 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHL-------------DEL-ALYPDGYAPELRTKVAKHLG--------VDEEQLLFG 87 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HHh-hcCCCCcHHHHHHHHHHHhC--------CCHHHEEEC
Confidence 7899999999984 566777766531 222 34445689999999999985 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++.+++++||.|++++|+|+.|...+... |++++.+|++ ++.+|++.+++.+++ +++++++
T Consensus 88 ~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~d~~~l~~~~~~------~~~~v~i 157 (359)
T PRK03158 88 AGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIE-GAEVREVPLK---DGGHDLEAMLKAIDE------QTKIVWI 157 (359)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEEecC---CCCcCHHHHHHhcCC------CCCEEEE
Confidence 99999999999999999999999999999998888877 9999999986 346889999887754 7889999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+|||||||.+++.+++.++++.|+ +|++||+||+|.++.+++.. .+.....+ ..+++++++||||+||++
T Consensus 158 ~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~-~~~~~~~~--------~~~~vi~~~S~SK~~g~~ 227 (359)
T PRK03158 158 CNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDY-PDTLPLLE--------KYENLIVLRTFSKAYGLA 227 (359)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccc-ccHHHHHH--------hcCCEEEEEechHhhcCc
Confidence 999999999999999999988774 69999999999987665432 23333333 347899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+|+||++++++ +.+.+......+.++.++|.++.++|++..+ +++.++.++++++.+.+.|.+.|+.+.++ +|
T Consensus 228 GlRiG~~v~~~~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g 301 (359)
T PRK03158 228 ALRVGYGIASEE-LIEKLNIARPPFNTTRIAQYAAIAALEDQAF----LKECVEKNAEGLEQYYAFCKEYGLFYYPS-QT 301 (359)
T ss_pred chhhehhcCCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cC
Confidence 999999999654 4455555555566899999999999987544 56667778888899999999888887655 45
Q ss_pred EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+|+|++++. +..++++.++ ++||.|+||+.|+. ++++||+++ +++++++++++|+++
T Consensus 302 ~~i~~~~~~--------~~~~~~~~l~-~~gv~v~~g~~f~~--~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 302 NFIFVDTGR--------DANELFEALL-KKGYIVRSGAALGF--PTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred cEEEEECCC--------CHHHHHHHHH-HCCeEEeeCCCCCC--CCeEEEecC--CHHHHHHHHHHHHHh
Confidence 899998852 1335777776 57999999999863 679999998 799999999999876
No 78
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-45 Score=366.48 Aligned_cols=328 Identities=21% Similarity=0.277 Sum_probs=262.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|+|+++ ++.+.+++.+. .....|++. +..+||+++|++++ +++++|+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~--------------~~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~ 107 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM--------------KFPYVYPDP-ESRRLRAALAEDSG--------LESENIL 107 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh--------------HhhccCCCC-CHHHHHHHHHHHhC--------cChhhEE
Confidence 458999999999985 46566666542 223468765 67999999999986 6889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|++++|+|..|...++.. |++++.++.+ .+|.+|++++++++.. +++++|
T Consensus 108 ~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~~~~-----~~~~~v 179 (380)
T PLN03026 108 VGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVN-GAEVIKVPRT--PDFSLDVPRIVEAVET-----HKPKLL 179 (380)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHHhc-----cCCcEE
Confidence 9999999999999999999999999999999888877777 9999999985 4578999999988832 278999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.+++++|++.+ ++||+||+|.++.+.+ +...... ..+++++++||||+||
T Consensus 180 ~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~----~~~~~~~--------~~~~viv~~SfSK~~g 243 (380)
T PLN03026 180 FLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE----SRMKWVK--------KYDNLIVLRTFSKRAG 243 (380)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc----chHHHHH--------hCCCEEEEecchHhhc
Confidence 9999999999999999988888753 8999999999865432 2222322 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||++++++ +.+.+.+....+.++.++|.++.++|.+.+ ++++.++.++++++.+.+.|++++.....+.
T Consensus 244 laGlRiGy~~~~~~-~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~ 318 (380)
T PLN03026 244 LAGLRVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALSNPK----YLEDVKNALVEERERLFGLLKEVPFLEPYPS 318 (380)
T ss_pred CccccceeeecCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCeECCC
Confidence 99999999999655 445555565556688999999999997744 4677888999999999999998864323566
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+|+|+|++++... +..+++..++ ++||.|+++..++ .++++||+++ ++++++.++++|+++
T Consensus 319 ~~~f~~~~~~~~~------~~~~~~~~l~-~~gI~v~~~~~~~--~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 319 DANFILCRVTSGR------DAKKLKEDLA-KMGVMVRHYNSKE--LKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCeEEEEECCCCC------CHHHHHHHHH-HCCeEEEECCCCC--CCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 7799999987421 2335667766 6799999987532 4679999998 678888888888753
No 79
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.9e-45 Score=369.77 Aligned_cols=283 Identities=19% Similarity=0.345 Sum_probs=232.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhhhCC
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~~g 157 (469)
...|++..|.++||++||+++++++| +.+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+... |
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~-g 176 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLL-G 176 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHc-C
Confidence 56799999999999999999988766 45789999999999999999999987 79999999999999999999887 9
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
.++++++++++++|.+|++.+++++++...++.++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999877789999999999987543334478999999999999999999999999999999999999999999988
Q ss_pred cCCC-CccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEe--cCHHHHHHHHHhc-ccccCcHHHHHHH
Q 043923 238 FSSP-GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMS-SFGLVSSQTQYLL 312 (469)
Q Consensus 238 ~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~--~~~~~~~~~~~~~-~~~~~s~~~q~~~ 312 (469)
|++. .+.++.++..+++. ..+..+++|+++||||+| |+||+|+||+++ .++.+.+.+.+.. ..++++.++|.++
T Consensus 257 y~~~~~~~s~~~~~~~~~~-~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q~aa 335 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGP-PISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQIFM 335 (407)
T ss_pred cCCCCCcccHHHHHhhhcc-cccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHHHHH
Confidence 8764 45566555321100 000135899999999998 899999999995 2334444444442 3455788999999
Q ss_pred HHHhcCch----hh---HHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecc
Q 043923 313 SALLSDKK----FT---QNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 313 ~~~l~~~~----~~---~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~ 365 (469)
.++|.... .. .++.++.++.++++++.+.+.|+++ |+++.+|+||||+|++++
T Consensus 336 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 336 GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99997542 11 2333556889999999999999997 999999999999997665
No 80
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-44 Score=360.44 Aligned_cols=327 Identities=16% Similarity=0.256 Sum_probs=260.8
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
+.++|+.|+|+++++.. . ......|+++. ..+||+++|++++ +++++|++|+
T Consensus 32 ~~~~~~~ne~~~~~~~~-----~--------------~~~~~~Y~~~~-~~~lr~~ia~~~~--------~~~~~I~~t~ 83 (364)
T PRK04781 32 GDVWLNANESAWANPAD-----P--------------DASTRRYPDPQ-PPGLRSALAALYG--------CAPEQLLIGR 83 (364)
T ss_pred CCEEeeCCCCCCCCChh-----h--------------cchhccCCCCC-HHHHHHHHHHHhC--------cChHHEEEeC
Confidence 57999999999875421 0 12356798764 6999999999985 6899999999
Q ss_pred ChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 119 GATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 119 G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+++++..++.+++.+| |.|++++|+|..|...++.. |++++.+|++ .+++|.+|++++.+.+.. +++++|+
T Consensus 84 G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~lv~ 157 (364)
T PRK04781 84 GSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQ-NAPLVEVPLVDGADGFHADVPAIVAAALA-----SNAKLVF 157 (364)
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCCCccCCCcCHHHHHHHHhc-----cCCeEEE
Confidence 99999999999999999 79999999999888777777 9999999985 345688888888655432 2789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++|||||||.+++.++++++++.|+ ++++||+||+|.++.+.. +...+.. ..+++++++||||+||+
T Consensus 158 l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~----~~~~~~~--------~~~~vi~~~SfSK~~gl 224 (364)
T PRK04781 158 LCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP----SAVGLLA--------RYDNLAVLRTLSKAHAL 224 (364)
T ss_pred EcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc----chHHHHh--------hCCCEEEEecChhhccc
Confidence 9999999999999999999999885 478999999999865321 2333333 44789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN 355 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~ 355 (469)
||+|+||+++++ .+.+.+.+....+.++++.|.++..+|+++.+ .+..+..+.++++++.+.+.|+++ ++....+.
T Consensus 225 ~GlRvGy~v~~~-~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 301 (364)
T PRK04781 225 AAARIGSLIANA-ELIAVLRRCQAPYPVPTPCAALAEQALSAPAL--AVTARRVAEVRAERERLHAALAQLPGVRRVYPS 301 (364)
T ss_pred ccceeeeeeCCH-HHHHHHHhccCCCCCCHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC
Confidence 999999999954 45566666666667889999999999988643 234555567888999999999988 66434456
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+|+|+|++++. ..++.+.+ +++||.|+||..|.. .++|+||+++ +++++++++++|+++.
T Consensus 302 ~g~f~~~~~~~---------~~~~~~~l-~~~gI~v~~~~~~~~-~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 302 QGNFLLVRFDD---------AEAAFQAL-LAAGVVVRDQRAAPR-LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCcEEEEEcCC---------HHHHHHHH-HHCCeEEeeCCCCCC-CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 67999999862 12445544 577999999987753 3679999998 6899999999998754
No 81
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-44 Score=361.33 Aligned_cols=346 Identities=24% Similarity=0.412 Sum_probs=277.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
..+++|+.+.+.++ ++.+.+++.+..... ......|++..|++++|+++|+++++.++ ..+++++|++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~ 101 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEE---------DPGLHGYMPNAGYPEVREAIAESLNRRFG--TPLTADHIVM 101 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcC---------CcCcccCCCCCCCHHHHHHHHHHHHHHhC--CCCCcCcEEE
Confidence 46799999876554 456666665432110 01246798889999999999999998766 3478999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|..+...+... |++++.++++++ +|.+|++++++++++ ++++++
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~-g~~v~~v~~~~~-~~~~d~~~l~~~~~~------~~~~v~ 173 (394)
T PRK06836 102 TCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNH-GGKLVVVPTDTD-TFQPDLDALEAAITP------KTKAVI 173 (394)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEEecCCc-cCcCCHHHHHhhcCc------CceEEE
Confidence 999999999999999999999999999999998888877 999999998753 478999999998865 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHh------cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITE------KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~------~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
+++|+||||.++|.+++++|+++|++ ||++||+||+|.++.|++....++.. ..+++++++||
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-----------~~~~~i~~~S~ 242 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK-----------YYDNSIVVYSF 242 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH-----------ccCcEEEEecc
Confidence 99999999999999999999999999 89999999999998776543333222 23689999999
Q ss_pred ccccCCCcceEEEEEecCHHHH-----HHHHHhc---ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVV-----AAATKMS---SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~-----~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
||.||+||+|+||+++++.... ....... .++.++.+.|.++..++++.. .++.++++++.+.+
T Consensus 243 SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~r~~l~~ 314 (394)
T PRK06836 243 SKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV--------DVSIYKRNRDLLYD 314 (394)
T ss_pred hhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH--------HHHHHHHHHHHHHH
Confidence 9999999999999999654321 1111111 223477889999999987631 24567788899999
Q ss_pred HHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 043923 343 GLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQ 422 (469)
Q Consensus 343 ~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~ 422 (469)
.|+++|+++.++.+|+|+|+.++.. +..++++. +.++||.|+||..|+. ++++||+++ .++++++++++
T Consensus 315 ~L~~~g~~~~~~~gg~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~~g~~f~~--~~~iRi~~~-~~~~~~~~~i~ 383 (394)
T PRK06836 315 GLTELGFECVKPQGAFYLFPKSPEE-------DDVAFCEK-AKKHNLLLVPGSGFGC--PGYFRLSYC-VDTETIERSLP 383 (394)
T ss_pred HHHhCCCEeecCCceEEEEEeCCCC-------CHHHHHHH-HHhCCEEEECchhcCC--CCeEEEEec-CCHHHHHHHHH
Confidence 9999999999999999999988741 23356644 4677999999998863 579999998 59999999999
Q ss_pred HHHHHHHhhc
Q 043923 423 RLKAFVDSIT 432 (469)
Q Consensus 423 ~L~~~l~~~~ 432 (469)
+|+++++++.
T Consensus 384 ~l~~~l~~~~ 393 (394)
T PRK06836 384 AFEKLAKEYK 393 (394)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 82
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-45 Score=364.46 Aligned_cols=321 Identities=18% Similarity=0.300 Sum_probs=259.5
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
+.|+|+.|||+++++.. +.. .....||+.. ..+|++++|++++ +++++|++|+
T Consensus 29 ~~~~l~~Nenp~~~~~~---~~~---------------~~~~~Yp~~~-~~~l~~~~a~~~g--------~~~~~I~~~~ 81 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQ---LTQ---------------QTLNRYPECQ-PKAVIENYAAYAG--------VKPEQVLVSR 81 (351)
T ss_pred CceEecCCCCCCCCChh---hcc---------------cccccCCCCC-hHHHHHHHHHHhC--------CCHHHEEEcC
Confidence 46999999999976521 111 2356798775 4899999999986 7899999999
Q ss_pred ChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 119 GATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 119 G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
|+++++..++.+++++| |.|+++.|+|..|...++.. |++++.+|+++ +|.+|++++++++. ++++|++
T Consensus 82 Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~-G~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~lv~l 151 (351)
T PRK01688 82 GADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVEIRTVPTLD--NWQLDLPAIADNLD-------GVKVVYV 151 (351)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHHhcc-------CCcEEEE
Confidence 99999999999999987 89999999999999888877 99999999863 58899999988762 7899999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
||||||||.+++.+++++|++.|++ +.+||+||+|.++. .. .+...+.. ..+++++++||||+||++
T Consensus 152 ~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~--~~--~s~~~~~~--------~~~n~iv~rSfSK~~gla 218 (351)
T PRK01688 152 CSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFC--PQ--ASLAGWLA--------EYPHLVILRTLSKAFALA 218 (351)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcC--CC--CChHHHHh--------hCCCEEEEecchHhhcCH
Confidence 9999999999999999999999976 67899999999853 22 24444544 447999999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA 356 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~ 356 (469)
|+|+||++++++ +.+.+.+....+.++.++|.++.++|.+.. .+++++.++.+.++++++.+.|+++ ++....+.+
T Consensus 219 GlRiGy~i~~~~-~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~ 295 (351)
T PRK01688 219 GLRCGFTLANEE-VINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSE 295 (351)
T ss_pred HHHHhHHhCCHH-HHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC
Confidence 999999998544 555566666666788888888888887643 3456777888888999999999988 665344556
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
++|+|++++. ..++.+.|+ ++||.|+++..|.. .++|+||+++ +++++++++++|+
T Consensus 296 ~nfi~~~~~~---------~~~l~~~L~-~~gi~vr~~~~~~~-~~~~iRis~~--~~~e~~~l~~al~ 351 (351)
T PRK01688 296 TNYILARFTA---------SSAVFKSLW-DQGIILRDQNKQPG-LSNCLRITIG--TREECQRVIDALR 351 (351)
T ss_pred CcEEEEEcCC---------HHHHHHHHH-HCCeEEEECCCcCC-CCCeEEEeCC--CHHHHHHHHHhhC
Confidence 7899998862 225666666 66999998765532 3679999998 6899999998873
No 83
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-44 Score=368.27 Aligned_cols=357 Identities=18% Similarity=0.247 Sum_probs=264.8
Q ss_pred CCeeeeecccccc-C--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 38 TGIIQMGLAENQL-S--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.++|+|+.+.+.. + .+.+.+++++..... ........|++..|.++||++||+++++++| +.+++++|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~v~~~~I 100 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASG-------KLTEALGNYDGPQGKDELIEALAALLNERYG--WNISPQNI 100 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCc-------ccccccccCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhE
Confidence 4789999887654 2 234555554421110 0012346799999999999999999988776 45789999
Q ss_pred EEeCChHHHHHHHHHHhcC-----CCCEEEE-ccCCCcChHHHHhhhCC----CEEEEeeccCC-CCcccCHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLAE-----PGEAFLL-PTPYYPGFDRDLKWRTG----VEIVPIQCTSL-NGFQITETAIEEAYQ 183 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~-----~gd~Vl~-~~P~y~~~~~~~~~~~g----~~~~~v~~~~~-~~~~~d~~~l~~~i~ 183 (469)
++|+|+++++.+++.++++ +||.|++ ++|+|+.|...+... | .....++++.+ .+|.+|++.++ +.
T Consensus 101 ~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~ 177 (416)
T PRK09440 101 ALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE-DLFVSYRPNIELLPEGQFKYHVDFEHLH--ID 177 (416)
T ss_pred EEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc-CceeecccccccccccccccCCCHHHcc--cC
Confidence 9999999999999999985 6899999 799999998755432 2 21222233321 14778988887 22
Q ss_pred HHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
.++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++ +....+ ....+. ..++
T Consensus 178 ------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~---~~~~~~-------~~~~ 240 (416)
T PRK09440 178 ------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIF---SEATPL-------WNPN 240 (416)
T ss_pred ------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcch---hhcCcc-------ccCC
Confidence 27899999999999999999999999999999999999999999753 111111 111110 2478
Q ss_pred EEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHH-HHHHHHHHHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISE-NKKRLKQRHRKL 340 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~l 340 (469)
+|+++||||+ ++||+|+||++++++ +.+.+...... .+++.+.|.++..++.++.+ .++..+ .+..++++++.+
T Consensus 241 vI~~~SfSK~-~~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~ 317 (416)
T PRK09440 241 IILCMSLSKL-GLPGVRCGIVIADEE-IIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQLA 317 (416)
T ss_pred eEEEeccccc-CCCcceEEEEeCCHH-HHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999996 899999999999655 44444444322 34788999999999998877 555544 677888888888
Q ss_pred HHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-------CCCeEEEEe
Q 043923 341 VSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-------EPGWFRVCF 409 (469)
Q Consensus 341 ~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-------~~~~iRi~~ 409 (469)
.+.|++. ++.+..|++|+|+|++++... .++.+++..+ .++||.|.||+.|+.. ..+++||++
T Consensus 318 ~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~-----~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~ 391 (416)
T PRK09440 318 IALLRRYLPDEPCLIHKPEGAIFLWLWFKDLP-----ITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNY 391 (416)
T ss_pred HHHHHHhcccCCeEEecCCCceEEEEECCCCC-----CCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEe
Confidence 8888764 456678899999999998521 1223566654 5779999999988642 135999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 410 ANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+. +++++++++++|++++++..+
T Consensus 392 ~~-~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 392 VQ-DDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred cC-CHHHHHHHHHHHHHHHHHHhh
Confidence 85 899999999999999987554
No 84
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=5e-44 Score=360.39 Aligned_cols=328 Identities=20% Similarity=0.243 Sum_probs=258.2
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh-hh
Q 043923 78 ELALFQDYHGLPAFKKALVEFMSEIRGNKVT-FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK-WR 155 (469)
Q Consensus 78 ~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-~~ 155 (469)
....|+++.|.++||+++++++.+..+ ... .+.++|++|+|+++++..++.+++++||.|++++|+|+.|...+. ..
T Consensus 36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~ 114 (388)
T PRK08637 36 EIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRR 114 (388)
T ss_pred cccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhc
Confidence 456899999999999999999875432 111 123689999999999999999999999999999999999998764 45
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-----cCeEEEEe
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-----KNIHLISD 230 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-----~~~~iI~D 230 (469)
|++++.+|+.. +++.+|+++++++++... .+...+++++|||||||.+++.+++++|+++|++ |+++||+|
T Consensus 115 -g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 115 -GAEIVTYPIFD-EDGGFDTDALKEALQAAY--NKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred -CCEEEEecccC-CCCcCCHHHHHHHHHhhc--cCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 99999999842 234579999998886210 1145567889999999999999999999999875 89999999
Q ss_pred ccccccccCCCCccchhhhhhccccccCCcCCeE--EEEccCccccCCCcceEEEEEecC-----HHHHHHHHH-h----
Q 043923 231 EIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV--HIVYSLSKDLGLPGFRVGAIYSND-----DMVVAAATK-M---- 298 (469)
Q Consensus 231 eay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--i~i~S~SK~~g~~GlRiG~li~~~-----~~~~~~~~~-~---- 298 (469)
|+|.++.|++....++.....+ ..+++ ++++|+||.|++||+|+||++++. +.+.+.+.. .
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~-------~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~ 263 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALAN-------LHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLI 263 (388)
T ss_pred ccchhcccCCccchhhHHHhhc-------ccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHh
Confidence 9999988776544443222111 33564 455799999999999999999753 444444332 1
Q ss_pred -cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCCh
Q 043923 299 -SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 299 -~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~ 373 (469)
...+.+|.+.|.++..+++++.+ .+++++.+..++++++.+.+.|++. ++.+.++++|+|+|++++.
T Consensus 264 ~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~------- 335 (388)
T PRK08637 264 RSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG------- 335 (388)
T ss_pred hcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh-------
Confidence 12345789999999999998776 6777778888999999999988765 5788889999999999973
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+..++++++++++||.+.+. +++++||+++..+++++++++++|+++++.+
T Consensus 336 ~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 VDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 124468888887889988742 2568999999778999999999999999754
No 85
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2e-44 Score=360.28 Aligned_cols=326 Identities=17% Similarity=0.239 Sum_probs=261.5
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
+++|+|+.|+|+++ ++.+.+++.+. ......|++.. .++||++||++++ +++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~e~I~i 100 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARS-------------AALSGRYDLEL-EDDLRTLFAAQEG--------LPADHVMA 100 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHH-------------HHHhcCCCCch-HHHHHHHHHHHhC--------cChhhEEE
Confidence 57899999999985 56666666553 12234688664 8999999999875 68999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|++++|+|..|...++.. |++++.+|++. +|.+|++++++.. +++++++
T Consensus 101 t~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~-------~~~~~v~ 170 (370)
T PRK09105 101 YAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQ-GAPVAKVPLRA--DGAHDVKAMLAAD-------PNAGLIY 170 (370)
T ss_pred cCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHhcC-------CCCCEEE
Confidence 999999999999999999999999999999999888887 99999999864 5778988887652 2688999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+||||||||.+++.++++++++.|+ ++++||+||+|.++ ... .+..++.+ ..+++++++||||+||+
T Consensus 171 l~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f--~~~--~s~~~~~~--------~~~~vi~~~SfSK~~g~ 237 (370)
T PRK09105 171 ICNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHF--SDA--PSVVDLVA--------QRKDLIVLRTFSKLYGM 237 (370)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHh--ccC--cchHHHHh--------hCCCEEEEecccHhhcC
Confidence 9999999999999999999999764 59999999999864 322 24444433 34789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA 356 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~ 356 (469)
+|+|+||+++++. +.+.+... ..+.++.+.|.++.++|.+. +++++.++.++++++.+.+.|+++|+++.++++
T Consensus 238 ~GlRiG~~v~~~~-~i~~l~~~-~~~~~~~~~~~aa~~~L~~~----~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~ 311 (370)
T PRK09105 238 AGMRLGLAAARPD-LLAKLARF-GHNPLPVPAAAAGLASLRDP----KLVPQRRAENAAVREDTIAWLKKKGYKCTPSQA 311 (370)
T ss_pred CccceeeeecCHH-HHHHHHhc-CCCCcCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCC
Confidence 9999999999654 44444444 34447788888888888764 357788889999999999999999999888888
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+|| +++++. +..++++.+++ +||.| |..|. ..++|+||+++ +++++++++++|+++++
T Consensus 312 ~f~-~~~~~~--------~~~~l~~~L~~-~gI~v--~~~~~-~~~~~~Ris~~--~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 312 NCF-MVDVKR--------PAKAVADAMAK-QGVFI--GRSWP-IWPNWVRVTVG--SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred cEE-EEeCCC--------CHHHHHHHHHH-CCcEE--ecCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 766 577751 13467777775 59998 34453 24689999998 68889999999988763
No 86
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-44 Score=355.59 Aligned_cols=325 Identities=19% Similarity=0.259 Sum_probs=259.2
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+.|+|+++ ++.+.+++.+.. .....|++..|.++||+++|++++ +++++|+
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~aia~~~~--------~~~~~I~ 79 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARL-------------GDLAAYPSTEDERRARAAVAARHG--------RTPDEVL 79 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHh-------------hHhhcCCCccchHHHHHHHHHHhC--------cChhhEE
Confidence 457999999999885 566777776631 235679988899999999999985 6899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++.+++. + .+| .++++.|+|..+...++.. |++++.+|++. +|.+|++.++ + +++++
T Consensus 80 it~Ga~~al~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~-G~~i~~v~~~~--~~~~d~~~l~----~------~~~~i 143 (349)
T PRK07908 80 LLAGAAEGFALLAR-L-RPR-RAAVVHPSFTEPEAALRAA-GIPVHRVVLDP--PFRLDPAAVP----D------DADLV 143 (349)
T ss_pred ECCCHHHHHHHHHh-c-CCC-eEEEeCCCChHHHHHHHHc-CCEEEeeccCc--ccCcChhHhc----c------CCCEE
Confidence 99999999999988 4 665 5778899999998888877 99999999874 3778877542 2 67899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.++|.+++.+ +|+ ++.++|+||+|.+++. +. ..++.+. ..+++++++||||.||
T Consensus 144 ~l~np~NPTG~~~~~~~l~~---l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~----------~~~~~i~i~S~SK~~~ 207 (349)
T PRK07908 144 VIGNPTNPTSVLHPAEQLLA---LRR-PGRILVVDEAFADAVP-GE-PESLAGD----------DLPGVLVLRSLTKTWS 207 (349)
T ss_pred EEcCCCCCCCCCcCHHHHHH---HHh-cCCEEEEECcchhhcc-CC-ccccccc----------cCCCEEEEeecccccC
Confidence 99999999999999887554 454 4778888999998643 22 2343332 3367999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||++++++ +.+.+......+.++++.+.++.+++.+.. .+++++.++.++++++++.+.|+++++++.++.
T Consensus 208 l~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~ 284 (349)
T PRK07908 208 LAGLRVGYALGAPD-VLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVAGLRAVGARVVDPA 284 (349)
T ss_pred CccceeeeeecCHH-HHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCC
Confidence 99999999999654 444455454456677888888888877432 456788899999999999999998888888888
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+|+|+|++++. . +.+...++++||.|.||..|+...++++||+++ +++++++++++|++++.
T Consensus 285 ~g~~~~~~~~~---------~-~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 285 AAPFVLVRVPD---------A-ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred CceEEEEECCc---------H-HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 89999999874 1 234455678899999999986545789999997 68899999999988764
No 87
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-44 Score=359.93 Aligned_cols=338 Identities=19% Similarity=0.252 Sum_probs=268.3
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
..|+|+.|+|+++ ++.+.+++++..... ......|++ .|.++||+++|+|++++++ +++++++|++|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~---------~~~~~~Y~~-~g~~~lr~aia~~~~~~~~--~~~~~~~I~it 94 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEA---------AAGLNRYPD-RDAVALRADLAAYLTAQTG--VGLTVENVWAA 94 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh---------hhhhccCCC-CchHHHHHHHHHHhhhhcc--CCCChhhEEEC
Confidence 4699999999995 566777776531100 023567876 4889999999999988776 45789999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++++++++||.|+++.|+|..|...+... |.+++.++.+ ++|.+|++++++++++. +++++++
T Consensus 95 ~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~~-----~~~~i~l 166 (368)
T PRK03317 95 NGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGT-HTEWVEGPRA--ADFTLDVDAAVAAIAEH-----RPDVVFL 166 (368)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhc-CCeeEEcccC--CCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 99999999999999999999999999999999888876 9999988865 46789999999988642 6788999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+||+||||.+++.+++++|+++| +++||+||+|.++.+.+. .+...+.+ ..+++++++||||+||++
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~--~~~~~~~~--------~~~~~i~~~SfSK~~g~~ 233 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT--PSALTLLP--------EYPRLVVSRTMSKAFAFA 233 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC--cCHHHHHH--------hCCCEEEEEechhhhccc
Confidence 99999999999999988888866 689999999998654442 23344433 336899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+|+||+++++ .+.+.+......+.+++++|.++.++|++.+. +.+.++++.++++.+.+.|++.|+++.++.++
T Consensus 234 GlRiG~~~~~~-~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 308 (368)
T PRK03317 234 GGRLGYLAAAP-AVVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERDRVVAWLRELGLRVAPSDAN 308 (368)
T ss_pred hhhhhhhhCCH-HHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCc
Confidence 99999999954 45555555554556889999999999976432 33455667888899999999999988888898
Q ss_pred EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+++|.+++. ..++++.++ ++||.|.++. .++++|++++ +++++++++++|+++++..
T Consensus 309 ~~~~~~~~~---------~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~--~~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 309 FVLFGRFAD---------RHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG--TPEENDAFLAALAEVLATE 365 (368)
T ss_pred EEEEeccCC---------HHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 888866531 224555554 6799998642 2579999997 6889999999999988654
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-44 Score=358.77 Aligned_cols=334 Identities=18% Similarity=0.208 Sum_probs=266.3
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
.+|+|+.|+|+++ ++.+.+++.+. ......|++. +.++||++||++++ +++++|++|
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~-------------~~~~~~Y~~~-~~~~Lr~~ia~~~~--------~~~~~I~it 90 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREA-------------AAEIWKYGDP-ENHDLRHALAAHHG--------VAPENIMVG 90 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHH-------------HHHhhcCCCC-ccHHHHHHHHHHhC--------CCHHHEEEc
Confidence 5689999999986 45666666653 1234578876 47999999999985 688999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+|++.+ .+|++++.+.+.. .+++++++
T Consensus 91 ~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~vp~~~~---~~~~~~l~~~~~~-----~~~~~i~l 161 (369)
T PRK08153 91 EGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGF-GGRLVTVPYRDD---REDLDALLDAARR-----ENAPLVYL 161 (369)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHc-CCeEEEeeCCCC---CCCHHHHHHHhcc-----cCCcEEEE
Confidence 99999999999999999999999999999999888877 999999998643 3678888766542 27889999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+|||||||.++|.+++++++++|+ ++++||+||+|.++.+++. ..+ +.. ..+++++++||||+||+|
T Consensus 162 ~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~---~~~--------~~~~~i~~~SfSK~~g~~ 228 (369)
T PRK08153 162 ANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APP---IDT--------DDPNVIRMRTFSKAYGLA 228 (369)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chh---hhh--------cCCCEEEEecchHhccCc
Confidence 999999999999999999999887 4999999999998655432 122 222 236899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+|+||++++++ +.+.+.+....++++++.|.++.++|++.. ++++.++.++++++.+.+.|++.|+.+. +.++
T Consensus 229 GlRiG~~v~~~~-~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~ 302 (369)
T PRK08153 229 GARVGYAIGAPG-TIKAFDKVRNHFGMNRIAQAAALAALKDQA----YLAEVVGKIAAARDRIAAIARANGLTPL-PSAT 302 (369)
T ss_pred chheeeeecCHH-HHHHHHHhhcCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcC
Confidence 999999999654 445555555556689999999999997644 4677888899999999999998888755 4667
Q ss_pred EEEEEecccccccCChhHHHHHHHHHHHhCCeEEe-CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS-PGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~-pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|+|++++... ....+++++++ ++||.++ |+... .++++||+++ ++++++.++++|+++++..++
T Consensus 303 ~f~~~~~~~~~-----~~a~~l~~~l~-~~Gi~v~~p~~~~---~~~~iRis~~--~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 303 NFVAIDCGRDG-----AFARAVLDGLI-ARDIFVRMPGVAP---LDRCIRVSCG--PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred cEEEEECCCCc-----ccHHHHHHHHH-HCCeEEeeCCCCC---CCCeEEEecC--CHHHHHHHHHHHHHHHHHhhc
Confidence 99999886210 12335666665 5699995 65421 3569999998 699999999999999986665
No 89
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-44 Score=357.84 Aligned_cols=329 Identities=20% Similarity=0.273 Sum_probs=263.9
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i 114 (469)
+.++|+|+.|+|+++ ++.+.+++.+.... .....|++ .|.++||+++|++++ +.+ ++|
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~~I 84 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAE-----------VALNRYPD-PRAAALKAALRAAMG--------VPAGADV 84 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhc-----------cccccCCC-CCHHHHHHHHHHHhC--------cCCCCcE
Confidence 468999999999985 56677777653110 23567987 577999999999996 333 589
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||+|+++.|+|..|...++.. |++++.+|++ .+|.+|++++++++.+. ++++
T Consensus 85 ~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~--~~~~~d~~~l~~~~~~~-----~~~~ 156 (356)
T PRK04870 85 LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLA-GLEFVGVPLT--ADFTLDLPAMLAAIAEH-----RPAL 156 (356)
T ss_pred EEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHc-CCEEEEecCC--CCCCCCHHHHHHHhhcC-----CCCE
Confidence 99999999999999999999999999999999999888877 9999999987 35789999999988632 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|+++|||||||.+++.+++++|+++| +.++|+||+|.++.+ ... ..... ..+++++++|||| +
T Consensus 157 v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~--~~~---~~~~~--------~~~~vi~~~S~SK-~ 219 (356)
T PRK04870 157 VFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAG--DSW---LPRLA--------RFPNLLVMRTVSK-L 219 (356)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcC--cch---HHHHh--------hCCCEEEEecchh-h
Confidence 99999999999999999999999988 678999999987532 211 11122 3468999999999 8
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
|+||+|+||+++++. +.+.+......+.++.+.|.++..++++.+ ++++.++.++++++.+.+.|+++ |+.+.+
T Consensus 220 ~~~GlRiG~~i~~~~-~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 294 (356)
T PRK04870 220 GLAGLRLGYLAGHPA-WIAELDKVRPPYNVNVLTQATALFALEHVD----VLDAQAAQLRAERTRLAAALAALPGVTVFP 294 (356)
T ss_pred hhHHHhhhhhhCCHH-HHHHHHHccCCCcCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 999999999999654 444455555556688899999888887643 36777788889999999999988 887654
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.+|+|+|++++. ..+++. .++++||.|+||..|+...++++||+++ +.+++++++++|.+++
T Consensus 295 -~~~~~~~~~~~~---------~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 295 -SAANFILVRVPD---------AAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred -CCCeEEEEECCC---------HHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 556899999872 124454 4567899999999987656789999998 6899999999998753
No 90
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.8e-43 Score=359.17 Aligned_cols=315 Identities=17% Similarity=0.252 Sum_probs=244.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc-----EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK-----IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK 153 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~-----i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~ 153 (469)
...|++..|.++||+++++++.+.... ..++++ +++++|+.+ +...+..++.|||+|++++|+|+.|...++
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~--~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSP--AIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCc--hhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 457999999999999999998644321 122233 334454443 334444555799999999999999999999
Q ss_pred hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 154 WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 154 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
.. |++++.+|+...++|.+|++.+++.+.+. .++++++++++||||||.+++.+++++|+++|++||++||+||+|
T Consensus 161 ~~-g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 161 DA-GVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred Hc-CCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 88 99999999843345889999998887632 236788899999999999999999999999999999999999999
Q ss_pred cccccCCC--CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEE--ecCHHHH----HHHHHhc--cccc
Q 043923 234 SGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIY--SNDDMVV----AAATKMS--SFGL 303 (469)
Q Consensus 234 ~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li--~~~~~~~----~~~~~~~--~~~~ 303 (469)
.++.|++. .+.++..+.. ..+++|+++||||+|+++|+|+||++ +++..+. +.+.... ...+
T Consensus 237 ~~l~~~~~~~~~~~~~~~~~--------~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (423)
T PLN02397 237 QGFASGDLDADAQSVRMFVE--------DGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSN 308 (423)
T ss_pred CCccCCchhhhhHHHHHHHh--------cCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 99877541 2334433322 23579999999999999999999995 4343322 2222222 2334
Q ss_pred CcHHHHHHHHHHhcCchhhHHH---HHHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNY---ISENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~---~~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
++.+.|.++..+|+++.+.+.+ +++.++.++++++.+.+.|+++| +++..|++|||+|++++.
T Consensus 309 ~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~---------- 378 (423)
T PLN02397 309 PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNK---------- 378 (423)
T ss_pred CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCH----------
Confidence 6778999999999886543333 67888999999999999999987 788889999999998852
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+++.+|++++||.+.+ .+ |++++.++++.+++++++|+++++
T Consensus 379 -~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 379 -EQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -HHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 4788999999999972 22 999987899999999999999984
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-43 Score=354.03 Aligned_cols=347 Identities=18% Similarity=0.300 Sum_probs=273.4
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.++|+++ ++.+.+++.+.... .....|++..|.++||+++|++++ +++++|+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~--------~~~~~v~ 87 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEE-----------GEYCKYPPPEGFPELRELILKDLG--------LDDDEAL 87 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCcchHHHHHHHHHhcC--------CCCCcEE
Confidence 457899999999986 46666666653211 123568888899999999999985 6788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++++..++.+++.+||.|++++|+|..+...+... |++++.++++ ..++|.+|++.+++.+++ ++++
T Consensus 88 ~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~ 160 (380)
T PRK06225 88 ITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRF-GAEVIEVPIYSEECNYKLTPELVKENMDE------NTRL 160 (380)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHh-CceEEeeccccccCCccCCHHHHHhhcCC------CceE
Confidence 9999999999999999999999999999999888778777 9999999974 344688999999988764 7889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++||+||||.++|.+++++|+++|+++|+++|+||+|.++..+ . .....+ ..++++++.||||.|
T Consensus 161 v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~--~~~~~~----------~~~~~i~~~s~SK~~ 227 (380)
T PRK06225 161 IYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE-H--TLAAEY----------APEHTVTSYSFSKIF 227 (380)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc-C--Cchhhc----------CCCCEEEEeechhhc
Confidence 999999999999999999999999999999999999999875322 1 222222 336889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce-
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC- 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v- 351 (469)
|++|+|+||++++++ +.+.+.... ...+.+.++|.++..++... .++.++.++.++++++.+.+.|+++ |+.+
T Consensus 228 g~~G~RiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 303 (380)
T PRK06225 228 GMAGLRIGAVVATPD-LIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLP 303 (380)
T ss_pred CCccceeEEEecCHH-HHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhCcCCccc
Confidence 999999999999655 444444332 23447788888888888653 3456667777788888888999875 5432
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
..+.+|+|+|++++... .+..++...+. ++||.++||..|+.. +++++|++++. +++++++++++|++++++
T Consensus 304 ~~~~~g~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 304 VYPSHGNMMVIDISEAG-----IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVET 376 (380)
T ss_pred cCCCCCeEEEEEccccc-----CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHH
Confidence 23456788999986421 12345666666 679999999876542 46799999985 899999999999999998
Q ss_pred hcc
Q 043923 431 ITT 433 (469)
Q Consensus 431 ~~~ 433 (469)
.+.
T Consensus 377 ~~~ 379 (380)
T PRK06225 377 LRT 379 (380)
T ss_pred hhc
Confidence 775
No 92
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-43 Score=353.91 Aligned_cols=334 Identities=20% Similarity=0.280 Sum_probs=269.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|||+.|+|+++ ++.+.+++.+.. .....|++..+ .+||+++|++++ +++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 88 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAA-------------DELHRYPDGSG-FELKAALAEKFG--------VDPERII 88 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 457899999999885 455666666531 23457887654 899999999985 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|++++|+|..+...+... |++++.+|++ ++.+|++.+++.+++ ++++|
T Consensus 89 ~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v 158 (367)
T PRK02731 89 LGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAV-GAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLV 158 (367)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHc-CCeEEEeccc---CCCCCHHHHHHHhCC------CCcEE
Confidence 9999999999999999999999999999999888777766 9999999874 467899999988764 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
+++|||||||.+++.++++++++.|+ +++++|+||+|.++.+.+....++ ...+ ..+++++++||||.||
T Consensus 159 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~-~~~~--------~~~~~i~~~S~SK~~g 228 (367)
T PRK02731 159 FIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGL-ELVA--------KFPNVVVTRTFSKAYG 228 (367)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHH-HHHh--------hcCCEEEEeeehHhhc
Confidence 99999999999999999999999875 699999999999876654332232 3332 3468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||++++++ +.+.+.+....+..+.++|.++.+++++.. ++++.++.++++++.+.+.|++.|+.+.+ .
T Consensus 229 ~~G~RiG~l~~~~~-~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~ 302 (367)
T PRK02731 229 LAGLRVGYGIAPPE-IIDALNRVRQPFNVNSLALAAAVAALDDDA----FVEKSRALNAEGMAWLTEFLAELGLEYIP-S 302 (367)
T ss_pred CcccceeeeeCCHH-HHHHHHHccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHCCCccCC-C
Confidence 99999999999654 555555555455578899999999998643 46777888889999999999998988775 4
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+|+|+|++++... +..++++.|. ++||.|+++..|+ .++++|++++ +.+++++++++|+++++
T Consensus 303 ~g~~~~i~~~~~~------~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 303 VGNFILVDFDDGK------DAAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred CceEEEEECCCCC------CHHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 5689999985422 2335666665 6799999998875 3679999997 68899999999999874
No 93
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-43 Score=352.88 Aligned_cols=325 Identities=16% Similarity=0.290 Sum_probs=257.4
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+|+++ ++.+.+++.+... .....|++. |.++||+++|++++ +++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~-~~~~lr~aia~~~~--------~~~~~I~i 82 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALG------------DDLRLYPDP-NADALRQAIAAYYG--------LDPEQVFV 82 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhh------------hhhhcCCCC-cHHHHHHHHHHHhC--------CCHHHEEE
Confidence 57899999999986 5677777765311 234678766 56999999999985 68999999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++++++++||.|++++|+|+.|...++.. |++++.+|++ .+|.+|++++++ .+++++
T Consensus 83 t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~----------~~~~v~ 149 (353)
T PRK05387 83 GNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLY-GIPYEEIPLD--DDFSIDVEDYLR----------PNGGII 149 (353)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHc-CCEEEEeecC--CCCCCCHHHHHh----------cCCEEE
Confidence 999999999999999999999999999999888877777 9999999986 357789888763 457889
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++|||||||.++|.+++++|++.++ ++++|+||+|.+ |.+.. ...+.. ..+++++++||||+||+
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~--~~~~~---~~~~~~--------~~~~~i~~~S~SK~~~~ 214 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVD--FGGES---AIPLID--------RYPNLLVVQTFSKSRSL 214 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccc--cCCcc---hHHHHh--------hCCCEEEEEehhHhhcc
Confidence 9999999999999999999988653 899999999986 44332 222222 33679999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc---cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS---FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+|+|+||++++++ +.+.+..... .++++.+.|.++.+++.+.++ .++.++++.++++.+.+.|+++|+++.+
T Consensus 215 ~GlR~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 289 (353)
T PRK05387 215 AGLRVGFAIGHPE-LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAY----FEETRAKVIATRERLVEELEALGFEVLP 289 (353)
T ss_pred hhhhceeeecCHH-HHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeECC
Confidence 9999999999544 4444444432 245788999999999976544 5677888899999999999999987654
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+|+|+|++++.. +..++++.+. ++||.|++... ...++++||+++ +++++++++++|++++.
T Consensus 290 -~~~~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~~~~--~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 290 -SKANFVFARHPSH-------DAAELAAKLR-ERGIIVRHFNK--PRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred -CcCcEEEEECCCC-------CHHHHHHHHH-HCCEEEEECCC--CCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 5668999998731 2335666664 67999985321 123679999998 67999999999998764
No 94
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-43 Score=350.27 Aligned_cols=315 Identities=17% Similarity=0.232 Sum_probs=247.7
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC-CCCcEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF-DTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~-~~~~i~ 115 (469)
+.++||||.|+||++++... +. ...+..||+. . .+|++++|++++ + ++++|+
T Consensus 23 ~~~~i~ls~Nenp~~~~~~~--~~---------------~~~~~~Yp~~-~-~~L~~~ia~~~~--------~~~~~~I~ 75 (339)
T PRK06959 23 YDAWLDLSTGINPHGYPVPP--VP---------------ADAWRRLPED-D-DGLAACAARYYG--------APDAAHVL 75 (339)
T ss_pred hhhhceeccCCCCCCCCCCC--CC---------------HHHHHhCCCc-h-HHHHHHHHHHhC--------CCCcccEE
Confidence 45789999999999754100 00 0234569865 3 899999999996 4 368999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|++++|..+.. ++++|| |+++.|+|+.|...++.. |++++.++.+. +.+. + .++++
T Consensus 76 i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~-g~~~~~v~~~~--------~~~~----~------~~~~v 134 (339)
T PRK06959 76 PVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARH-GHRVVPLDEAA--------DTLP----A------ALTHL 134 (339)
T ss_pred ECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHC-CCEEEeecccc--------hhcc----c------cCCEE
Confidence 99999999997765 567887 889999999999999887 99999988642 1121 1 45689
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++||||||||.+++.+++++|++.|++++.++|+||+|.++.+. .++..+. ..+++++++||||+||
T Consensus 135 ~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~---------~~~~vi~l~SfSK~~g 201 (339)
T PRK06959 135 IVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHT---------DRPGLVVLRSVGKFFG 201 (339)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhcc---------CCCCEEEEecChhhcC
Confidence 99999999999999999999999999999999999999985322 2333331 2367999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
+||+|+||+++++ .+.+.+.+....+.++.++|.++.++|++.++ .++.++.++++++++.+.|+++|+++. .
T Consensus 202 l~GlRiGy~v~~~-~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~--~ 274 (339)
T PRK06959 202 LAGVRAGFVLAAP-ALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLAALLRAHGFAVH--A 274 (339)
T ss_pred CcchheEEEecCH-HHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHHHCCCCcc--C
Confidence 9999999999964 45566666666666899999999999987655 567789999999999999999988765 3
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcccc
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTL 435 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~ 435 (469)
+++|+|++++. ..++.+.++ ++||.|++ |+ ..+++||+++. +++++++++++|+++++....++
T Consensus 275 ~~~f~~~~~~~---------~~~l~~~l~-~~GI~vr~---~~--~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~~~ 338 (339)
T PRK06959 275 TPLFSWTDDPR---------AAALHAALA-RRGIWTRY---FA--PPPSVRFGLPA-DEAEWQRLEDALAECVPTLAAAS 338 (339)
T ss_pred cceEEEEeCCC---------HHHHHHHHH-hCCeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhhcc
Confidence 56999998752 124566655 66999984 32 24699999953 78899999999999888776643
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-43 Score=351.21 Aligned_cols=319 Identities=19% Similarity=0.293 Sum_probs=253.8
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
.++|+|+.|+|+++++.. + . ......||+. +..+||+++|++++ +++++|++|
T Consensus 31 ~~~~~l~~ne~~~~~~~~---~-~--------------~~~~~~Yp~~-~~~~Lr~aia~~~~--------~~~~~I~it 83 (354)
T PRK04635 31 RGDIWINANESPFNNEYK---L-D--------------LARLNRYPEC-QPPELINAYSAYAG--------VAPEQILTS 83 (354)
T ss_pred CCcEEeeCCCCCCCCChh---h-h--------------hHHhccCCCC-CHHHHHHHHHHHhC--------cCHHHEEEe
Confidence 356999999999976521 1 1 1345679887 47999999999885 789999999
Q ss_pred CChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 118 AGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+|++++|..++.+++++| |.|+++.|+|..|...++.. |++++.+|++. +|.+|++.++ .+ + ++++|+
T Consensus 84 ~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~-g~~v~~v~~~~--~~~~~~~~l~-~~-~------~~~li~ 152 (354)
T PRK04635 84 RGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETF-NVGVKALPLTA--DYQLPLDYIE-QL-D------GAKLVF 152 (354)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCC--CCCCCHHHHH-hc-c------CCCEEE
Confidence 999999999999999999 89999999999998888777 99999999863 5778888876 22 2 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+||||||||.+++.+++++|++.|+ +++||+||+|.++. .. .+..++.. ..+++++++||||+||+
T Consensus 153 i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~--~~--~s~~~~~~--------~~~~~iv~~S~SK~~~l 218 (354)
T PRK04635 153 ICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFC--PE--YSVADLLA--------SYPNLVVLRTLSKAFAL 218 (354)
T ss_pred EeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhc--cC--cchHHHHh--------hCCCEEEEechHHHhhh
Confidence 9999999999999999999999876 49999999999853 22 23344433 34789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSN 355 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~ 355 (469)
+|+|+||++++++ +.+.+......++++.+.|.++.++|.+.. .+++++.++.++++++.+.+.|++++ +++.++.
T Consensus 219 ~GlRlG~~i~~~~-~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~ 295 (354)
T PRK04635 219 AGARCGFTLANEE-LIEILMRVIAPYPVPLPVSEIATQALSEAG--LARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN 295 (354)
T ss_pred hHHHHhhhhCCHH-HHHHHHhhcCCCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC
Confidence 9999999999554 445555555555678888888888887653 23467777888999999999999985 7877775
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
|+|+|++++. ..++. +++.++||.|+++..+ ..++++||+++ +++++++++++|++
T Consensus 296 -g~f~~~~~~~---------~~~~~-~~l~~~gv~v~~~~~~--~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 296 -GNYVLAKFDD---------VDAVF-KALWDAGIVARAYKDP--RLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred -CcEEEEECCC---------HHHHH-HHHHHCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 5799998862 12344 4556789999876432 23679999998 68999999998865
No 96
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=3.7e-42 Score=336.50 Aligned_cols=309 Identities=18% Similarity=0.260 Sum_probs=237.0
Q ss_pred CCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 32 DEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 32 ~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
+.+.++.++|||+.|+|+++|+.+.+++.+.. .....||. ...|++++|++++
T Consensus 2 ~~~~~~~~~i~l~~~~np~~p~~~~~a~~~~~-------------~~~~~yp~---~~~l~~~ia~~~~----------- 54 (311)
T PRK08354 2 HGGIREEGLIDFSASVNPYPPEWLDEMFERAK-------------EISGRYTY---YEWLEEEFSKLFG----------- 54 (311)
T ss_pred CCCCCccceeEecCCCCCCCCHHHHHHHHHHH-------------HHhhcCCC---hHHHHHHHHHHHC-----------
Confidence 44566778999999999998777777776531 22446764 4789999999874
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
++|++|+|+++++..++..+ .+||.|++++|+|+.|...++.. |++++.++ +|++.+++.++ +
T Consensus 55 ~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~~~--------~d~~~l~~~~~-------~ 117 (311)
T PRK08354 55 EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFF-AARIIKGP--------NDPEKLEELVE-------R 117 (311)
T ss_pred CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHc-CCEEeecC--------CCHHHHHHhhc-------C
Confidence 37999999999999888655 48999999999999999999887 99997764 46788877654 4
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++.. . ..+++++++|||
T Consensus 118 ~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~------~----------~~~~vi~~~S~S 181 (311)
T PRK08354 118 NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES------P----------EGENIIKLRTFT 181 (311)
T ss_pred CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc------c----------CCCcEEEEeccH
Confidence 567999999999999999999999999999999999999999987665321 1 236899999999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC 351 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v 351 (469)
|+||+||+|+||+++ +.+.+.....++.++.+.+.++.+++++. .+++.+.++.+.+.++.+.+.+ .
T Consensus 182 K~~~l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l------~ 248 (311)
T PRK08354 182 KSYGLPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIEDD---FEHLRKTMPLIWREKERFEKAL------Y 248 (311)
T ss_pred hhcCCccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhc------C
Confidence 999999999999998 33445555556667777888887777642 2344555555555555554433 2
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.++.+++|+ ++++. +.++++.+ .++||.|+||+.|+. ++|+||+++ .+++.++++++|+++.
T Consensus 249 ~~~~~~~~~-~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~--~~~~~~~l~~al~~~~ 310 (311)
T PRK08354 249 VKSDANFFI-KDVGD---------AEKFVEFL-KRNGILVRDCTSFGL--PGYIRFSVR--DREENEKLIRALREWR 310 (311)
T ss_pred CCCCCcEEE-EECCC---------HHHHHHHH-HHCCeEEEecccCCC--CCeEEEEeC--CHHHHHHHHHHHHHhh
Confidence 356665554 66542 23566655 467999999999963 689999998 5777888888887653
No 97
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-42 Score=337.98 Aligned_cols=317 Identities=17% Similarity=0.275 Sum_probs=245.6
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.+.++|+|+.|+|+++ ++.+.+++.+.... .....|++. |.++||+++|+++++.. +++++|
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~-----------~~~~~Y~~~-~~~~Lr~aia~~~~~~~-----~~~~~i 79 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNS-----------DTLRIYYDS-PDEELIEKILSYLDTDF-----LSKNNV 79 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCCC-ChHHHHHHHHHHhCCCC-----CCcceE
Confidence 3468899999999996 45566666553110 224458765 78999999999997541 579999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|++++|..++.++ |.|++++|+|..|...++.. |++++.+|++. ++.++... +. ++++
T Consensus 80 ~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~----~~-------~~~~ 141 (335)
T PRK14808 80 SVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV-GAKFLEVPLTK--DLRIPEVN----VG-------EGDV 141 (335)
T ss_pred EEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHHc-CCeEEEecCCC--cCCCChhH----cc-------CCCE
Confidence 99999999999999888 67999999999999999988 99999999874 34444221 11 5689
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++|||||||.++|.+++++|+ +++++||+||+|.++ .+.. ...... ..+++++++||||+|
T Consensus 142 i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f--~~~~---~~~~~~--------~~~~vi~~~S~SK~~ 204 (335)
T PRK14808 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEF--HGES---YVDLLK--------KYENLAVIRTFSKAF 204 (335)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhh--cCCc---hHHHHH--------hCCCEEEEEechhhc
Confidence 99999999999999999988876 479999999999984 3322 223333 336899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
|++|+|+||++++++ +.+.+.+....+.++.++|.++..++.+.+ +..+.++.+.++++.+.+.|++.|+++.++
T Consensus 205 ~l~GlRvG~~v~~~~-~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~ 279 (335)
T PRK14808 205 SLAAQRIGYVVSSEK-FIDAYNRVRLPFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALREMGYRITDS 279 (335)
T ss_pred cCcccceEEEEeCHH-HHHHHHHhcCCCCCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEECCC
Confidence 999999999999654 555555555456688899999988887543 356666777788899999999999888877
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++ .|+|+.++.. +..++.+. +.++||.|+. | .+++||+++ ++++++++++.|+++
T Consensus 280 ~g-~f~~~~l~~~-------~~~~~~~~-l~~~Gi~V~~---~----~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 280 RG-NFVFIFMEKE-------EKERLLEH-LRAKNIAVRS---F----REGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred CC-eEEEEeCCCc-------cHHHHHHH-HHHCCeEEEE---C----CCCeEEecC--CHHHHHHHHHHHHhh
Confidence 65 6889998731 12245555 4567999994 3 257999998 689999999998764
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.3e-42 Score=339.48 Aligned_cols=310 Identities=17% Similarity=0.245 Sum_probs=239.3
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
+.++|+|+.|+|+++++... +.. .....||.. ..+||++||++++ +++|++
T Consensus 19 ~~~~i~l~~ne~p~~~~~~~--~~~---------------~~~~~yp~~--~~~Lr~~ia~~~~----------~~~I~i 69 (330)
T PRK05664 19 LADWLDLSTGIAPWPWPVPA--IPA---------------DAWARLPET--DDGLEAAARAYYG----------APQLLP 69 (330)
T ss_pred HHHheeecCCcCCCCCCCcc--cCH---------------HHHHhCCCC--hHHHHHHHHHHhC----------CCCEEE
Confidence 34689999999998653110 110 123458754 3899999999985 579999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|++++|.+++. +.+||+|++++|+|+.|...++.. |++++.+|++ +++..++ ++++++
T Consensus 70 t~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~----------~~~~~~~-------~~~~v~ 129 (330)
T PRK05664 70 VAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWRRA-GHQVRELDEA----------EVEAALD-------SLDVLV 129 (330)
T ss_pred CcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHHHc-CCeEEEechh----------hHhhhhc-------CCCEEE
Confidence 9999999998853 579999999999999999999887 9999999853 2344432 567899
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
++|||||||.+++.+++++|+++|++++++||+||+|.++ .. ..++..+. ..+++++++||||+||+
T Consensus 130 l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~--~~--~~s~~~~~---------~~~~vi~~~SfSK~~gl 196 (330)
T PRK05664 130 VVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN--TP--QHSLAACA---------HRPGLIVLRSFGKFFGL 196 (330)
T ss_pred EeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC--CC--cccccccc---------cCCCEEEEeeccccccC
Confidence 9999999999999999999999999999999999999863 22 12433331 23689999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA 356 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~ 356 (469)
||+|+||++++++ +.+.+.+....+.++.+.|.++..+|.+..+ .++.++.++++++.+.+.|+++|+++.+ ..
T Consensus 197 ~GlRiG~~v~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~ 270 (330)
T PRK05664 197 AGARLGFVLAEPA-LLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAALLRRHGLTPAG-GC 270 (330)
T ss_pred CCcceEEEEeCHH-HHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHCCCcccC-Cc
Confidence 9999999999654 5455555555556889999999999987544 4667888999999999999998865322 22
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++|+|++++. ..++.+.+ .++||.|++ |+ .++++||+++. +++++++++++|+++.++
T Consensus 271 ~~f~~~~~~~---------~~~~~~~l-~~~gi~v~~---f~--~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 271 ALFQWVRTED---------AAALHEFL-ARRGILTRL---FE--QPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred ceEEEEecCC---------HHHHHHHH-HHCCeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 3889998752 22455554 577999984 43 35799999985 678888888888877554
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2.5e-42 Score=344.05 Aligned_cols=335 Identities=19% Similarity=0.284 Sum_probs=262.4
Q ss_pred CCCCCCCCCeeeeecccccc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 31 YDEVQNPTGIIQMGLAENQL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 31 ~~~~~~~~~~i~L~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
|.++.++.++|+|+.|++++ +++.+.+++.+.. .....|++ .|..+||+++|++++ +
T Consensus 15 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~-~g~~~lr~~ia~~~~--------~ 72 (352)
T PRK03321 15 YVPGKTVPGAIKLSSNETPFGPLPSVRAAIARAA-------------AGVNRYPD-MGAVELRAALAEHLG--------V 72 (352)
T ss_pred CCCCCCcccceeccCCCCCCCCCHHHHHHHHHHH-------------HhcCcCCC-CcHHHHHHHHHHHhC--------c
Confidence 55666666899999999998 4566777776531 23456864 689999999999996 6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
++++|++|+|+++++..++..++++||.|+++.|+|..|...++.. |++++.+++++ ++.+|++.+++++++
T Consensus 73 ~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~----- 144 (352)
T PRK03321 73 PPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVA-GATPVQVPLTP--DHTHDLDAMAAAITD----- 144 (352)
T ss_pred CHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHc-CCEEEEccCCC--CCCCCHHHHHHhhcc-----
Confidence 7899999999999999999999999999999999999888777776 99999999874 356889999988764
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++++++||+||||.+++.+++.++++.| +++++||+||+|.++.+++....+ ..... ..+++++++|
T Consensus 145 -~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~-~~~~~--------~~~~vi~~~S 213 (352)
T PRK03321 145 -RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDG-LELVR--------DHPNVVVLRT 213 (352)
T ss_pred -CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcH-HHHHh--------hCCCEEEEec
Confidence 789999999999999999999988888865 479999999999987765432222 22222 3478999999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
|||.||+||+|+||+++++ .+.+.+.+....+.++.++|.++.+++...+ .+. +..+.+.++++.+.+.|++.|+
T Consensus 214 ~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~---~~~-~~~~~~~~~r~~~~~~L~~~~~ 288 (352)
T PRK03321 214 FSKAYGLAGLRVGYAVGHP-EVIAALRKVAVPFSVNSLAQAAAIASLAAED---ELL-ERVDAVVAERDRVRAALRAAGW 288 (352)
T ss_pred chHHhhhHHHhhhhhcCCH-HHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHH-HHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999964 4555555555555689999998888887532 233 3334445566788899998888
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+.++ +|+|+|++++. +..++.+.+ +++||.|.+ |+ +.++||+++ +.+++++++++|.+++.
T Consensus 289 ~~~~~-~g~~i~i~l~~--------~~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~~--~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 289 TVPPS-QANFVWLPLGE--------RTADFAAAA-AEAGVVVRP---FA---GEGVRVTIG--APEENDAFLRAARAWRA 350 (352)
T ss_pred ccCCC-CCCEEEEeCCC--------CHHHHHHHH-HHCCEEEEc---cC---CCcEEEeeC--CHHHHHHHHHHHHHHhc
Confidence 76544 57999999852 123566665 578999987 43 346999997 79999999999998764
No 100
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-42 Score=340.29 Aligned_cols=326 Identities=17% Similarity=0.293 Sum_probs=254.0
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
..++|+.|+|+++ |+.+.+++.+.... .....|++. +..+||+++|++++ +++++|++|
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~it 82 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKS-----------SQVNIYPDP-TAEKLREELARYCS--------VVPTNIFVG 82 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhc-----------CcccCCCCc-cHHHHHHHHHHHhC--------CCcccEEEe
Confidence 4599999999985 56677766653110 234568765 46999999999985 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++++ .+|.+|++++++++++. ++++|++
T Consensus 83 ~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~~~~~-----~~k~v~l 154 (351)
T PRK14807 83 NGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIA-GAVEIPVKLK--EDYTYDVGSFIKVIEKY-----QPKLVFL 154 (351)
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEeecC--CCCCCCHHHHHHHhhcc-----CCCEEEE
Confidence 99999999999999999999999999999988877777 9999999986 34778999999988632 7899999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+||+||||.+++.++++++++ +++.++|+||+|.++ + +....+ ... ..+++++++||||.||+|
T Consensus 155 ~~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~-~-~~~~~~---~~~--------~~~~vi~~~S~SK~~~~~ 218 (351)
T PRK14807 155 CNPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEF-Y-GNTIVD---VIN--------EFENLIVLRTLSKAFGLA 218 (351)
T ss_pred eCCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhh-c-ccchHH---Hhh--------hCCCEEEEecchHhcccc
Confidence 999999999999988766665 567789999999874 3 322222 222 347899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA 356 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~ 356 (469)
|+|+||+++++ .+.+.+......+.++.+.|.++..++++. + +++.++.+.++++.+.+.|++. |+++.++ +
T Consensus 219 GlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~----~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~ 291 (351)
T PRK14807 219 GLRVGYAVANE-NILKYLNLVKSPYNINSLSQVIALKVLRTG-V----LKERVNYILNERERLIKELSKIPGIKVYPS-K 291 (351)
T ss_pred hhceeeeecCH-HHHHHHHHccCCCCcCHHHHHHHHHHHhHH-H----HHHHHHHHHHHHHHHHHHHHhCCCcEECcC-C
Confidence 99999999954 455555555555668899999999999753 2 4555567778888899999876 8877654 5
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
|+|+|++++. ..++++.++ ++||.|+++..+. ..++++||+++ ++++++++++.|++++
T Consensus 292 ~~~~~i~~~~---------~~~~~~~l~-~~gV~v~~~~~~~-~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 292 TNFILVKFKD---------ADYVYQGLL-ERGILVRDFSKVE-GLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred ccEEEEEcCC---------HHHHHHHHH-HCCEEEEECCCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 6899999862 224555554 6799999865322 23679999998 5788899999988764
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.7e-42 Score=342.17 Aligned_cols=327 Identities=19% Similarity=0.310 Sum_probs=257.4
Q ss_pred CCCeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.|+|++++ +.+.+++.+. ......|++..+ ++||+++|++++ +++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 90 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKE-------------LSKIHRYPEPDA-PELREALSKYTG--------VPVENII 90 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHH-------------HHhhcCCCCCCH-HHHHHHHHHHhC--------CCHHHEE
Confidence 4489999999998854 5566655543 123456887654 999999999985 6789999
Q ss_pred E-eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 L-TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~-t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+ |+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+ ++|.+|++++++.+++ ++++
T Consensus 91 ~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~--~~~~~~~~~l~~~~~~------~~~~ 161 (361)
T PRK00950 91 VGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAH-GAKPVYAKRE--EDFSLDVDSVLNAITE------KTKV 161 (361)
T ss_pred EeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHhcc------CCCE
Confidence 9 899999999999999999999999999999988878777 9999999854 4678999999988754 7889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++++|+||||.+++.+++.++ |+++|+++|+||+|.++. +. +...+.+ ..+++++++||||+|
T Consensus 162 v~~~~p~nptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~--~~---~~~~~~~--------~~~~vi~~~S~SK~~ 225 (361)
T PRK00950 162 IFLCTPNNPTGNLIPEEDIRKI---LESTDALVFVDEAYVEFA--EY---DYTPLAL--------EYDNLIIGRTFSKVF 225 (361)
T ss_pred EEEeCCCCCCCCCcCHHHHHHH---HHHCCcEEEEECchhhhC--cc---chHHHHH--------hcCCEEEEEeehHhh
Confidence 9999999999999998885555 557899999999998753 22 2222333 336899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
|+||+|+||+++++. +.+.+.+....+.++++.|.++..++.+.++ +++.++.++++++++.+.|. +.+. +
T Consensus 226 g~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~---~~~~-~ 296 (361)
T PRK00950 226 GLAGLRIGYGFVPEW-LIDYYMRAKTPFSLTRLSQAAAIAALSDKEY----IEKSIEHGIKSREYLYNELP---FKVY-P 296 (361)
T ss_pred cCchhhcchhcCCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHhhcC---eeEC-C
Confidence 999999999999654 4444555555555788999998899876443 56667777888888877775 5554 4
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+|+|+|++++. .+..++++.++ ++||.++||..|+..+++++|++++ +++++++++++|+++++
T Consensus 297 ~~~~~i~~~~~~-------~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 297 SEANFVLVDVTP-------MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIVE 361 (361)
T ss_pred CcceEEEEECCC-------CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHhC
Confidence 567999999842 12346777766 5699999999887555789999998 68899999999998763
No 102
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-41 Score=336.04 Aligned_cols=316 Identities=16% Similarity=0.277 Sum_probs=244.9
Q ss_pred CeeeeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
++|+|+.|+|++++ +.+.+++.+.... .....|++ .|.++||+++|++++ +++++|++|
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~g~~~lr~~ia~~~~--------~~~~~I~~t 78 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKR-----------VPFNRYPH-ITSDPLREAIAEFYG--------LDAENIAVG 78 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhc-----------CccccCCC-CCHHHHHHHHHHHhC--------cCcceEEEc
Confidence 67999999999853 5555555442110 12467875 689999999999996 689999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+|+++++..++..+ +||+|+++.|+|..|...+... |++++.++++. +|.+|++.+++.+. +++++++
T Consensus 79 ~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~~v~~ 146 (337)
T PRK03967 79 NGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLN-GIPVIDVPLKE--DFTIDGERIAEKAK-------NASAVFI 146 (337)
T ss_pred CCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCcCHHHHHHhcc-------CCCEEEE
Confidence 99999999988877 7999999999999888777776 99999999873 57889998887542 6788999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP 277 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 277 (469)
+|||||||.+++.+++.+++ +++++||+||+|.++. .. +...... ..+++|+++||||+||+|
T Consensus 147 ~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~~--~~---~~~~~~~--------~~~~vi~l~S~SK~~~l~ 209 (337)
T PRK03967 147 CSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEFS--GK---SLIGLID--------EYPNLILLRTFSKAFGLA 209 (337)
T ss_pred eCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhhc--cc---chHHHHh--------hCCCEEEEecchHhhcch
Confidence 99999999999988866654 4799999999999853 22 2222222 336899999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+|+||++++++ +.+.+.+....++++.++|.++..+|++.++ ..+.++.+.++++.+.+.|.+. ..+.++
T Consensus 210 GlRiG~iv~~~~-~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~----~~~~~~ 280 (337)
T PRK03967 210 GIRAGYAIANEE-IIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRRELGEY----AYPSDA 280 (337)
T ss_pred hhhheeeecCHH-HHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHhccC----cCCCCC
Confidence 999999999644 5555555555666889999999999986543 4445555566778888888764 235678
Q ss_pred EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+|+|++++ +++.++ ++||.|+++.. ..++++||+++ +.++.++++++|.++.+.+
T Consensus 281 ~~~~~~~~-------------~~~~l~-~~gi~v~~~~~---~~~~~~Ri~~~--~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 281 NFLLLKLD-------------AYDYLL-ENGIVVRKLSG---RLEGHIRVTVG--KREENDEFIKALKEIKEGY 335 (337)
T ss_pred cEEEEhHH-------------HHHHHH-HCCEEEEeCCC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 99999874 345555 56999997652 23569999998 5788899999998887654
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.8e-41 Score=335.71 Aligned_cols=326 Identities=22% Similarity=0.354 Sum_probs=263.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|||+.|.|+++ ++.+.+++.+.. .....|++..+ ++||+++|++++ +++++|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 75 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEA-------------DKLHRYPDPDP-AELKQALADYYG--------VDPEQIL 75 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhH-------------HHhhcCCCCCH-HHHHHHHHHHhC--------cChHHEE
Confidence 357999999999985 456677666531 23467887766 999999999996 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|++++|+|+.+...+... |++++.++++. ++.+|++.+++.+++ ++++|
T Consensus 76 ~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~~~~------~~~~v 146 (346)
T TIGR01141 76 LGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIH-GAEVVKVPLDE--DGQLDLEDILVAIDD------KPKLV 146 (346)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEeccCC--CCCCCHHHHHHhcCC------CCCEE
Confidence 9999999999999999999999999999999888777776 99999999874 367899999987643 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.++++++++.|+ +++++|+||+|.++.+.. +...... ..+++++++|+||.||
T Consensus 147 ~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~----~~~~~~~--------~~~~~i~~~S~sK~~g 213 (346)
T TIGR01141 147 FLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP----STLPLLA--------EYPNLIVLRTLSKAFG 213 (346)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc----cHHHHHh--------hCCCEEEEehhhHhhh
Confidence 99999999999999999999999887 799999999998743321 1222222 2357899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS 354 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~ 354 (469)
++|+|+||+++++ .+.+.+......+.++.++|.++.+++++.. +.++.++.++++++.+.+.|+++ |+++.++
T Consensus 214 ~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 288 (346)
T TIGR01141 214 LAGLRIGYAIANA-EIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLYDGLKKLPGLEVYPS 288 (346)
T ss_pred chhhhceeeecCH-HHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhcCCCEECCC
Confidence 9999999999954 4555555555555678899999999987754 46778888999999999999988 8886544
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
+|+|+|++++. +..++++.|. ++||.+.||..|+.. ++++|++++ +++++++++++|
T Consensus 289 -~g~~~~~~~~~--------~~~~~~~~L~-~~gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~~~~l 345 (346)
T TIGR01141 289 -DANFVLIRFPR--------DADALFEALL-EKGIIVRDLNSYPGL-PNCLRITVG--TREENDRFLAAL 345 (346)
T ss_pred -cCCEEEEecCC--------CHHHHHHHHH-HCCeEEEeCCCcCCC-CCeEEEecC--CHHHHHHHHHHh
Confidence 56899999874 1235666665 679999999988644 789999987 789999998876
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=6.9e-41 Score=330.27 Aligned_cols=313 Identities=19% Similarity=0.273 Sum_probs=251.2
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.+++|+|+.|+|+++++... .. .....+|++..+ ++||+.+|++++ +++++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~ 69 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPPVPP----IP-------------ASAWARYPDPEY-DELRAAAAAYYG--------LPAASVLP 69 (330)
T ss_pred hhheeEccccCCCCCCChhh----cc-------------hHHHhhCCCccH-HHHHHHHHHHhC--------CChhhEEE
Confidence 44689999999999875211 11 144678988776 999999999985 57899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..+..++ .+| .|++++|+|..+...+... |++++.++ |++.+++.++ ++++++
T Consensus 70 t~G~~~~i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~-g~~~~~~~---------d~~~l~~~~~-------~~~~v~ 130 (330)
T TIGR01140 70 VNGAQEAIYLLPRLL-APG-RVLVLAPTYSEYARAWRAA-GHEVVELP---------DLDRLPAALE-------ELDVLV 130 (330)
T ss_pred CCCHHHHHHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHc-CCEEEEeC---------CHHHHHhhcc-------cCCEEE
Confidence 999999999987664 677 6999999999999988877 99999887 5678887763 567899
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.+++.+++++|+++|+++|++||+||+|.++.+. .++..+.. ..+++++++|+||+||+
T Consensus 131 i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~----~~~~~~~~--------~~~~~i~~~S~SK~~g~ 198 (330)
T TIGR01140 131 LCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD----ASLAPQAA--------RFPGLVVLRSLTKFFGL 198 (330)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc----cchhhHhc--------cCCCEEEEEecchhhcC
Confidence 9999999999999999999999999999999999999876432 13333322 34789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSN 355 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~ 355 (469)
+|+|+||++++++ +.+.+......+.+++++|.++..++.+.++ .++.+++++++++.+.+.|++++ +++.+ .
T Consensus 199 ~G~R~G~i~~~~~-~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~ 272 (330)
T TIGR01140 199 AGLRLGFVVAHPA-LLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAALLARLGGLEVVG-G 272 (330)
T ss_pred chhhhhheeCCHH-HHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHhCCCceECC-C
Confidence 9999999999654 5555555555566788999999999987655 55678899999999999999987 55544 4
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
+|+|+|++++. ..++++.++ ++||.+.||..|+..+.+++||+++. +.++ +.++++|
T Consensus 273 ~~~f~~~~~~~---------~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 273 TALFLLVRTPD---------AAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred CCeEEEEEcCC---------HHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 67999998863 235777776 46999999999965556799999984 3344 7777665
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=299.92 Aligned_cols=347 Identities=20% Similarity=0.260 Sum_probs=269.4
Q ss_pred ccccCCCCCCcHHHHHHHHHHHH-hHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhC
Q 043923 78 ELALFQDYHGLPAFKKALVEFMS-EIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT 156 (469)
Q Consensus 78 ~~~~Y~~~~g~~~Lr~aia~~l~-~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~ 156 (469)
...+|++..|.++|..-+.++.+ ..+.+. ...-+|++|+|.+.++..+++.++++||.|+++.++|+.-...++..
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~--~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~- 168 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPP--YKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEAL- 168 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCC--CCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcccc-
Confidence 34679999999999999999665 233311 23348999999999999999999999999999999999988888877
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhc---CCceeEEEEecC--CCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKR---HLKVKGVLVTNP--SNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~~~~~vvl~~P--~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
|+.+++|++|.++ ++++.|++.++.+... .++++ |+++-| +||||..++.+..++|.++|++|+++||+||
T Consensus 169 gv~~ipv~md~~G---i~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 169 GVKIIPVKMDQDG---IDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred CceEEeccccCCC---CCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999998654 8999999998765322 34555 566656 8999999999999999999999999999999
Q ss_pred cccccccCC--------CCccchhhhhhcc--ccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc
Q 043923 232 IYSGTVFSS--------PGFVSIMEILKDR--NCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF 301 (469)
Q Consensus 232 ay~~~~~~~--------~~~~s~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~ 301 (469)
.|.-+.|+. .+..+...+...+ .+...|..++||.+.||||.++ ||+|+||+.+++..+...+......
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVA 323 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhccee
Confidence 998776662 1111211121111 1222457789999999999997 9999999999766665555433211
Q ss_pred -ccCcHHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHhc---C-CceecCCceEEEEEecccc--cccC
Q 043923 302 -GLVSSQTQYLLSALLSD---KKFTQNYISENKKRLKQRHRKLVSGLEKA---G-ISCLKSNAGLFCWVDMRHL--LRSN 371 (469)
Q Consensus 302 -~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g-~~v~~~~~g~~~~v~~~~~--~~~~ 371 (469)
..+|..+|.++.++|.. .+| .+|+.+.+..|..|+..+..+|.+. + +++.+|.+|+|+||+++-. ...+
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~-~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~ 402 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGF-LRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKK 402 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccccccc
Confidence 12566777777776664 334 5889999999999999999999886 4 6889999999999999721 1223
Q ss_pred ChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CC----CeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 372 TFEAEMELWKKIVYDVKLNISPGSSCHCT-EP----GWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~----~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
......+.....+.++||.+.+|..|... +. -++|++++..+.|+++++++|+..++++.-+
T Consensus 403 ~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 403 SINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred chHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence 33445566777778899999999999764 22 2999999988999999999999999998765
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=2.9e-34 Score=285.11 Aligned_cols=344 Identities=27% Similarity=0.501 Sum_probs=266.8
Q ss_pred eeeeccccccCh--HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 41 IQMGLAENQLSF--DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 41 i~L~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
|||+.|.+++.+ +.+.+..+... -.....|++..|..+++++++++++..++. ...++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~--~~~~~~~~~~~ 66 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAAL------------RAGLLGYYPDPGLPELREAIAEWLGRRGGV--DVPPEEIVVTN 66 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhh------------ccCCCCCCCCCCcHHHHHHHHHHHHHHhCC--CCCcceEEEec
Confidence 578888888743 33444333110 023456888889999999999999977652 34578999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~ 198 (469)
|+++++..++.++.++||+|+++.|+|..+...++.. |.+++.++.+..+.+..+.+.++..+. +++++|+++
T Consensus 67 ~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~v~i~ 139 (350)
T cd00609 67 GAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLA-GAEVVPVPLDEEGGFLLDLELLEAAKT------PKTKLLYLN 139 (350)
T ss_pred CcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CCEEEEEecccccCCccCHHHHHhhcC------ccceEEEEE
Confidence 9999999999999999999999999999999999887 999999998765543332244444332 388999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc
Q 043923 199 NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG 278 (469)
Q Consensus 199 ~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 278 (469)
+|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+.+... ...... +..+.+++++|++|.++++|
T Consensus 140 ~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~s~~K~~~~~g 210 (350)
T cd00609 140 NPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP-PALALL--------DAYERVIVLRSFSKTFGLPG 210 (350)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc-ccccCc--------CccCcEEEEeecccccCCcc
Confidence 999999999999999999999999999999999999765544322 101111 14467899999999999899
Q ss_pred ceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce-ecCC
Q 043923 279 FRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC-LKSN 355 (469)
Q Consensus 279 lRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v-~~~~ 355 (469)
.|+||+++++..+.+.+.....+ +..+...+.++..++.... ++.++.++.+.++++++.+.|++.+... ..+.
T Consensus 211 ~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 287 (350)
T cd00609 211 LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE---EHLEELRERYRRRRDALLEALKELGPLVVVKPS 287 (350)
T ss_pred cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 99999999764555555544333 4577888888888888753 4577888889999999999999986543 5667
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
+|+++|+.++.. ...+.+.+++.++||.+.++..|....+.++|++++.. ++++++++++|+
T Consensus 288 ~g~~~~~~~~~~-------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 288 GGFFLWLDLPEG-------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred ccEEEEEecCCC-------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 889999998753 12245677788889999999888755577999999975 999999999886
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=255.33 Aligned_cols=355 Identities=20% Similarity=0.286 Sum_probs=257.9
Q ss_pred CCCCeeeeeccccccChH-------HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC
Q 043923 36 NPTGIIQMGLAENQLSFD-------LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~ 108 (469)
+.++.|.|+.|.+..-|+ ...+.+++. ...+.+++|..++|...|.+++++++++.+|.+
T Consensus 28 rt~g~imLggGNPa~iPem~~~f~~~~aemla~~-----------~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwn-- 94 (417)
T COG3977 28 RTPGAIMLGGGNPARIPEMDDYFQDLLAEMLASG-----------KATEALCNYDGPQGKAVLIDALAKMLRREYGWN-- 94 (417)
T ss_pred cCCCceeeCCCCcccChhHHHHHHHHHHHHHhcc-----------hHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCC--
Confidence 445789999776554331 122222221 113568899999999999999999999999855
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcC---CC--CEEEEc-cCCCcChHHHHhhhCCCEEEE---eeccCCCC--cccCHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAE---PG--EAFLLP-TPYYPGFDRDLKWRTGVEIVP---IQCTSLNG--FQITETA 177 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~---~g--d~Vl~~-~P~y~~~~~~~~~~~g~~~~~---v~~~~~~~--~~~d~~~ 177 (469)
+++.+|.+|||++.+.+.++..|.. .| +.|++| .|.|.+|..+...- ..-|.. +.+.+.+- |.+|++.
T Consensus 95 it~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~-d~fVs~kP~iel~~~g~FKY~vDF~~ 173 (417)
T COG3977 95 ITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEE-DLFVSAKPNIELLPAGQFKYHVDFEH 173 (417)
T ss_pred CccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCc-cceeeccCCcccccccceeeccCHHH
Confidence 7899999999999999999988842 33 355555 88999887653221 111111 11222222 5567766
Q ss_pred HHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~ 257 (469)
+.- +..+.+|+++.|.||||.+++.+|+.+|..++++||+.+|+|.+|+-. |.+-.+..+.-+
T Consensus 174 l~i--------~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~iifsd~~~~-------- 236 (417)
T COG3977 174 LHI--------GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGIIFSDATPL-------- 236 (417)
T ss_pred ccc--------ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCceeccccccc--------
Confidence 653 237889999999999999999999999999999999999999999854 444333332223
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc--cCcHHHHHHHHHHhcCchhhHHHHHHH-HHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQYLLSALLSDKKFTQNYISEN-KKRLK 334 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~-~~~l~ 334 (469)
-.+|++.|.|+|| +|+||.|+|.+++ ++.+.+.+..+.... .++.+.+++++.+++.++. .+..++. +--|+
T Consensus 237 --w~~NiilC~SLSK-~GLPG~R~GIiIa-ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl-~rlseqVIrPFY~ 311 (417)
T COG3977 237 --WNENIILCMSLSK-LGLPGSRCGIIIA-NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDL-LRLSEQVIRPFYR 311 (417)
T ss_pred --CCCCEEEEeehhh-cCCCCcceeEEEc-cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchH-HHHHHHhhhHHHH
Confidence 3489999999999 5899999999999 556667777665442 2566889999999999886 4444443 33455
Q ss_pred HHHHHHHHHHHh----cCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC-------CC
Q 043923 335 QRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE-------PG 403 (469)
Q Consensus 335 ~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~-------~~ 403 (469)
++.+...+.|++ ..+.+..|+|..|+|+-+.+..- .++++.++| ++.||++.||..|.+.- ..
T Consensus 312 ~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI-----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hq 385 (417)
T COG3977 312 NRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI-----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQ 385 (417)
T ss_pred HHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC-----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccc
Confidence 555555555554 36778899999999998876432 244666654 67799999999887632 45
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 404 WFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 404 ~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
|+|+++.. ++++|++++++|.+.+++.-+
T Consensus 386 C~Rmn~~~-~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 386 CMRMNYVP-EPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred eEEEecCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 89999985 899999999999999887655
No 108
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=254.73 Aligned_cols=331 Identities=20% Similarity=0.294 Sum_probs=257.7
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.+++|.|+.++|+..|+.-. + +--..|+.+.. ..|+.++++- -++++|+|++
T Consensus 40 G~~iv~ld~~e~~ryPdP~q--~-----------------efk~~~~d~rn-k~ls~a~~~d--------kpLt~dnic~ 91 (375)
T KOG0633|consen 40 GRDIVKLDANENPRYPDPEQ--M-----------------EFKYVYPDPRN-KRLSDALAQD--------KPLTSDNICV 91 (375)
T ss_pred CCCceEeccccCCCCcCHHH--c-----------------ccccccCCccc-chhhhhcccC--------CCCCccceEE
Confidence 34688888888887543111 1 11234666654 6777776653 1478999999
Q ss_pred eCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+-|+.|.|.+++++.+.|| ++|++-.|+|+.|.-.+... +++++.+|+++ +|.++.+++.+.++. +..+|.+
T Consensus 92 GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iN-d~eVvkvpl~p--dF~lnvdai~evl~~----ds~iK~~ 164 (375)
T KOG0633|consen 92 GVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAIN-DAEVVKVPLNP--DFSLNVDAIAEVLEL----DSKIKCI 164 (375)
T ss_pred ecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecC-CceEEEecCCC--CccccHHHHHHHHhc----cccceEE
Confidence 9999999999999999999 89999999999998777776 99999999984 899999999888764 3478999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||..+..++++++++.-. |.++++||+|.+ |.+. .|-..++. .++|++++.++||.||
T Consensus 165 F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYid--Fsg~--~S~~~lV~--------kYpNLivlqTlSKsfG 230 (375)
T KOG0633|consen 165 FLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYID--FSGV--ESRMKLVK--------KYPNLIVLQTLSKSFG 230 (375)
T ss_pred EEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEe--eccc--cccchHhH--------hCCceeehhhhhhhcC
Confidence 99999999999999999888887332 789999999998 5552 24455665 6699999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI-SCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~~ 353 (469)
++|+|+||-.. +..+...+..+..+..+|.+...++.+++++.. -+.++..++.+-+.|.+|...|.+. ++ .+..
T Consensus 231 LAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n--~kkme~~rdaiv~er~RL~keLt~v~~~~~~~g 307 (375)
T KOG0633|consen 231 LAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN--GKKMEDVRDAIVRERERLFKELTEVPFLNDYPG 307 (375)
T ss_pred cceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--chHHHHHHHHHHHHHHHHHHHhhcCccccCCCC
Confidence 99999999998 555778888888777789988888889998654 3456778888888888888888876 32 2333
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+...+|+.+++.+... ..+..+..+++.++||.|+- .+. ...|++||+++ ++|+...+++.|++++
T Consensus 308 g~daNFiLi~v~~~~n----~~akkly~q~at~~gVvVRf---rgse~~c~G~lRitvG--t~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 308 GSDANFILIEVTGGDN----GMAKKLYKQDATKMGVVVRF---RGSEEGCKGYLRITVG--TPEENTVLMKCLKQFL 375 (375)
T ss_pred cccccEEEEEEcCCCc----HHHHHHHHHHHHhcceEEEE---cCCccccceeEEEEcC--CcccchHHHHHHHhhC
Confidence 4445788898875422 22345677778889999982 221 23789999998 6888899999988763
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2.4e-33 Score=285.63 Aligned_cols=351 Identities=15% Similarity=0.165 Sum_probs=254.6
Q ss_pred CCCeeeeecccc--ccChHH----HHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 37 PTGIIQMGLAEN--QLSFDL----LESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 37 ~~~~i~L~~~~n--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
..++|+|+++++ .+++|. +.++..+.. ......|.+..|.++||++++++++
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~------------~~g~~~Y~~~~g~~~Lreaia~~~~---------- 92 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAM------------MRGDEAYAGSRSYYRLEDAVKDIFG---------- 92 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHH------------HhCCcccCCCCCHHHHHHHHHHHhC----------
Confidence 346899999998 454432 333222210 0224579999999999999999995
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCC------CCcc--cCHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSL------NGFQ--ITETAIEEAY 182 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~------~~~~--~d~~~l~~~i 182 (469)
.+++++|+|+++|+.+++.++++||| |++++|.|..|...+... |.+++.+++++. ++|. +|+++|++.+
T Consensus 93 ~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~-G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i 170 (460)
T PRK13238 93 YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELN-GATAVDLVIDEALDTGSRHPFKGNFDLEKLEALI 170 (460)
T ss_pred CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHc-CCEEEEEeccccccccccccccCCcCHHHHHHHH
Confidence 45799999999999999999999999 999999999998878777 999999998642 3555 9999999999
Q ss_pred HHHHhcCCceeEEEEecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEecccc--ccccCC-----CCccchhhhhhccc
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYS--GTVFSS-----PGFVSIMEILKDRN 254 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~--~~~~~~-----~~~~s~~~~~~~~~ 254 (469)
++.. .+++++|++++|+|||| .+++.+++++|.++|++||++||+|+++. ..+|.. ....++.++
T Consensus 171 ~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i----- 243 (460)
T PRK13238 171 EEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI----- 243 (460)
T ss_pred hhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----
Confidence 7421 12699999999999997 99999999999999999999999999774 233422 112333322
Q ss_pred cccCCcCCeEEEEccCccccCCCcceE------EEEEecCHHHHHHHHHhc-------ccccCcHHHHHHHHHHhcCchh
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRV------GAIYSNDDMVVAAATKMS-------SFGLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRi------G~li~~~~~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~ 321 (469)
+..++|++|++.++|+++ |++++++..+.+.++... +++..+...|.+++..|.+..-
T Consensus 244 ---------~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~ 314 (460)
T PRK13238 244 ---------AREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD 314 (460)
T ss_pred ---------hhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC
Confidence 223456666666666664 355655455555554442 2232345557777766654211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccc---cCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR---SNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~---~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
.+++..+. +++++|.+.|.+.|+++..|.+|+|+++++..... ... ..+.+++.+|+++.||.+.|++.|.
T Consensus 315 -~~~~~~~~----~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~-~~~~~~a~~L~~e~GV~~~~~~~f~ 388 (460)
T PRK13238 315 -EDYLAYRI----GQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQ-FPAQALACELYLEAGIRGVEIGSLL 388 (460)
T ss_pred -hHHHHHHH----HHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCC-CchHHHHHHHHHHcCeeeeccccee
Confidence 23333332 25688999999999999999999999999976421 111 1246799999999999999998776
Q ss_pred CCC-----------CCeEEEEeec--CCHHHHHHHHHHHHHHHHhhcc
Q 043923 399 CTE-----------PGWFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 399 ~~~-----------~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
... .+.+|+++.. .+.++++.+.++|+++.++...
T Consensus 389 ~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~ 436 (460)
T PRK13238 389 LGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRES 436 (460)
T ss_pred cccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhh
Confidence 422 3689999986 3999999999999998754443
No 110
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=263.86 Aligned_cols=345 Identities=21% Similarity=0.329 Sum_probs=267.3
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhhhC
Q 043923 78 ELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKWRT 156 (469)
Q Consensus 78 ~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~~ 156 (469)
.+..|...+|.+-+|+.+|+|+.++.| ++.+|++|++|.|++.|+..++..++ .+.+.|++|-|.|+-|...+...
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~- 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL- 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh-
Confidence 456799999999999999999999988 77899999999999999999999885 56789999999999999888887
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|...+++-++++.+|.+|.++|++.+++.. ++.+++++++.||.||||.+++.+.+++|+.+|.+++++++.||+|.+-
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 999999999999999999999999998876 7889999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEe--cCHHHHHHHHHhcc-cccCcHHHHHH
Q 043923 237 VFSSP-GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMSS-FGLVSSQTQYL 311 (469)
Q Consensus 237 ~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~--~~~~~~~~~~~~~~-~~~~s~~~q~~ 311 (469)
+|... .|.|+...+.+++..-. +.--++.++|.||.+ |=.|.|-||+-. -.+.+.+.+.++.. -.+.+...|..
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~-~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~ 339 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYP-DNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKL 339 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccC-CceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhh
Confidence 88754 77888777665521000 011255678889987 458999999843 23444444443332 23344455555
Q ss_pred HHHHhcC-----chh--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEeccccc------ccCChhHHH
Q 043923 312 LSALLSD-----KKF--TQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLL------RSNTFEAEM 377 (469)
Q Consensus 312 ~~~~l~~-----~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~------~~~~~~~~~ 377 (469)
.-....- ..+ .....+.....++++.+.+.+.++.+ |+++.+++|.+|++-++.=+. .......+.
T Consensus 340 vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~ 419 (475)
T KOG0258|consen 340 VDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDE 419 (475)
T ss_pred hceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcH
Confidence 5444442 111 13334556677888889999999988 999999999999976653111 112223455
Q ss_pred HHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 378 ELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
-.|.+||+..||.+.||+.||.. +.-++|.++- ... + +.+++++++-.+.
T Consensus 420 FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL--p~~-~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 420 FYCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL--PPG-L-EIIEKFKKFHAEF 470 (475)
T ss_pred HHHHHHHHhcCeEEecCCCCCCCCceeEEEEeec--Cch-h-HHHHHHHHHHHHH
Confidence 67899999999999999999974 3458999995 233 4 7777777665543
No 111
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=1.4e-31 Score=264.70 Aligned_cols=322 Identities=14% Similarity=0.152 Sum_probs=223.7
Q ss_pred eeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCC
Q 043923 40 IIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAG 119 (469)
Q Consensus 40 ~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G 119 (469)
+|||++|+|+.|++.+.+++.+.. .....|++..+..+|++++|++++ + +.+++++|
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~-------------~~~~~Y~~~~~~~~L~~~la~~~g--------~--~~~~v~~~ 57 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAP-------------VGDDVYGDDPTVNALQDYAAELSG--------K--EAALFLPT 57 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhcc-------------CCCcccCCCHHHHHHHHHHHHHhC--------C--CeEEEeCc
Confidence 589999999998888888876642 234568656678999999999986 2 34467788
Q ss_pred hHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHH-HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 120 ATSANETLMFCLAEPGEAFLLPTPYYPG-FDRD-LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~-~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+++++..++.+++.+||.|+++.|+|.. |... +....+++++.++++ .+|.+|++++++++++......++++|++
T Consensus 58 g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 58 GTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred hHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 8888888888889999999999888753 3221 233313677888775 46789999999887531111115789999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
|||+ ||.+++.+++++|+++|++|+++|++||+|. |... ...+...+.. ..++++ .||||.||
T Consensus 136 ~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~---~~~~~~~~~~~~~~~~--------~~~~~~--~s~SK~~~ 200 (333)
T PRK10534 136 ENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARI---FNAVVAYGCELKEITQ--------YCDSFT--ICLSKGLG 200 (333)
T ss_pred ecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHH---HHHHHHcCCCHHHHHh--------cCCEEE--EEeEcCCC
Confidence 9776 5999999999999999999999999999987 3210 0112222211 113333 38999988
Q ss_pred CCcceEE-EEEecCHHHHHHHHHhccccc----CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 043923 276 LPGFRVG-AIYSNDDMVVAAATKMSSFGL----VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS 350 (469)
Q Consensus 276 ~~GlRiG-~li~~~~~~~~~~~~~~~~~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~ 350 (469)
++ +| |+++ ++.+.+.+.+....+. .+.+.+.++...|++ .. +..+...+.++++.+.|+++|++
T Consensus 201 ~~---~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~------~~-~~~~~~~~~r~~l~~~L~~~g~~ 269 (333)
T PRK10534 201 TP---VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH------NV-ARLQEDHDNAAWLAEQLREAGAD 269 (333)
T ss_pred Cc---ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh------hH-HHHHHHHHHHHHHHHHHHhCCCc
Confidence 64 78 5777 4555555555543321 223445555555532 11 22223444668999999999999
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
+.++. ++|+|++++.. +..++ .++++++||.|+|+. ++|++.+. ++++++++++++|++++.
T Consensus 270 ~~~~~-~nfv~~~~~~~-------~~~~~-~~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 270 VMRQD-TNMLFVRVGEE-------QAAAL-GEYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred cCCCC-ceEEEEECCch-------hHHHH-HHHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 88774 68999998731 12244 456667899999873 47887753 599999999999998775
No 112
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=6.5e-31 Score=259.34 Aligned_cols=282 Identities=15% Similarity=0.145 Sum_probs=205.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc---cCCCcChHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLP---TPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~---~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
+.+|++.+|++++ ++++++++++|+++|+..++.+++++||.|+++ .|+|..|...++.. |++++.+
T Consensus 56 ~~~Le~~lA~~~g--------~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~-ga~~~~~- 125 (346)
T TIGR03576 56 EEKVQELGREHLG--------GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLA-GAEYFES- 125 (346)
T ss_pred HHHHHHHHHHHcC--------CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHc-CCEEecc-
Confidence 4566666666664 578999999999999999999999999999975 57898888888877 8886432
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+++.++. .+++++|+++ ++||+|.+++.+++++|+++|++||+++|+||+|+.++.......
T Consensus 126 --------~~l~~l~~--------~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~ 188 (346)
T TIGR03576 126 --------DELSELKK--------IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP 188 (346)
T ss_pred --------CCHHHHhh--------CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC
Confidence 13444321 1256777774 679999999999999999999999999999999987543211111
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHHHHHHhcCchhh
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~~~~~l~~~~~~ 322 (469)
+.... +..+++.|||| +++|+|+||+++++. +.+.+.+.... . +++++.|.++.++|+...
T Consensus 189 ~~~~~------------~~divv~s~SK--alaG~r~G~v~~~~~-li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~-- 251 (346)
T TIGR03576 189 PALDL------------GADLVVTSTDK--LMDGPRGGLLAGRKE-LVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE-- 251 (346)
T ss_pred CHHHc------------CCcEEEeccch--hccccceEEEEeCHH-HHHHHHHhhcCcccCccHHHHHHHHHHHhhcc--
Confidence 22211 22366779999 568999999999654 54555554433 2 257788888888886532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
.+..++.++++++.+.+.++. +.+.++.++ |+|++++.. ++.+++.++++++||.++||+.|. ..+
T Consensus 252 ---~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~~~ 317 (346)
T TIGR03576 252 ---LSRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-GAS 317 (346)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-CCC
Confidence 245577888888888887774 555555554 899998741 123577888999999999998884 346
Q ss_pred CeEEEEeecCCHH---HHHHHHHHHHHHH
Q 043923 403 GWFRVCFANMSED---TLKLSMQRLKAFV 428 (469)
Q Consensus 403 ~~iRi~~~~~~~e---~i~~~l~~L~~~l 428 (469)
+|+||+++. +++ ++++++++|++-+
T Consensus 318 ~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 318 KTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 799999994 333 6999999987654
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=1.8e-29 Score=253.81 Aligned_cols=321 Identities=15% Similarity=0.196 Sum_probs=235.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCE
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVE 159 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~ 159 (469)
..|.+..|+.+|+++++++++ .+++++|+|+++|+.+++.++++|||.| +++|+|..+...+... |.+
T Consensus 47 ~~Y~~~~g~~~Leeaia~~~g----------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~-Ga~ 114 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDLFG----------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEAN-GAV 114 (431)
T ss_pred CccCCCCCHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhC-CCE
Confidence 359999999999999999996 4679999999999999999999999977 6899999998888777 999
Q ss_pred EEEeeccCCCC------c--ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 160 IVPIQCTSLNG------F--QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 160 ~~~v~~~~~~~------~--~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
++.+++++..+ | ++|++.++++|++. ...++++|++++|+||+ |.+++.++++++.++|++||++||+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~D 192 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLD 192 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 99999975432 4 49999999999751 01247899999999998 99999999999999999999999999
Q ss_pred ccccc--ccc-----CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcce------EEEEEecCHHHHHHHHH
Q 043923 231 EIYSG--TVF-----SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFR------VGAIYSNDDMVVAAATK 297 (469)
Q Consensus 231 eay~~--~~~-----~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR------iG~li~~~~~~~~~~~~ 297 (469)
+++.. .+| ++....++.++ ++.+.|+||.+.+.|+| .||++++++.+.+.++.
T Consensus 193 aAr~~~na~~i~~r~~g~~~~si~ei--------------~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~ 258 (431)
T cd00617 193 AARFAENAYFIKEREEGYRDKSIAEI--------------AREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQ 258 (431)
T ss_pred chhhHhhhhhhhcccccccCCCHHHH--------------HHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHH
Confidence 99541 122 12222333322 33456777877777777 56999977656555543
Q ss_pred hc-------ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc
Q 043923 298 MS-------SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS 370 (469)
Q Consensus 298 ~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~ 370 (469)
.. .++..+.....+++..|.+... . +...++++ ++++|.+.|++.|+++..|.+|+|+|++.+.....
T Consensus 259 ~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~---~~l~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~ 333 (431)
T cd00617 259 RVVLYEGFVTYGGMAGRDMEALAQGLREAVE-E---DYLRHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPH 333 (431)
T ss_pred hccccCCccccccccHHHHHHHHHHHHhccc-H---HHHHHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCC
Confidence 21 1222333333344435543211 1 22333444 44889999999999999999999999999864221
Q ss_pred C--ChhHHHHHHHHHHHhCCeEEeC-CCC-CC--CC-------CCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhcc
Q 043923 371 N--TFEAEMELWKKIVYDVKLNISP-GSS-CH--CT-------EPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 371 ~--~~~~~~~l~~~ll~~~GI~v~p-g~~-f~--~~-------~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. ......+++.+|+++.||.+.. |+. ++ +. ....+|+++.. .+.++++...++|..+.++...
T Consensus 334 ~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~ 411 (431)
T cd00617 334 IPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED 411 (431)
T ss_pred CCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh
Confidence 1 1124668899999999998653 441 11 11 13579999965 3999999999999999987554
No 114
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=8.4e-29 Score=248.00 Aligned_cols=301 Identities=15% Similarity=0.189 Sum_probs=209.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (469)
+.++++.+|++++ .+.+++++|+++++..++.+++++||.|+++.+.|......++.. |++++.+|.+.
T Consensus 53 ~~~~~e~lA~~~g----------~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~-g~~~~~~~~~~ 121 (370)
T TIGR02539 53 IHDFLEDLAEFLG----------MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERA-GLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHHhC----------CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHc-CCEEEEEecCC
Confidence 5788888999886 345677999999999999999999999999988866655666666 99999999875
Q ss_pred CCCcccCHHHHHHHHHHHHhc-CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKR-HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~-~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
+.+|.+|++++++++++.... ..++++|++++|+||||...+.+ +|+++|+++|+++|+||+|+.. ..+ .+.
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~---~i~~la~~~~~~livDea~~~g---~~~-~~~ 194 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAG---KVAKVCREKGVPLLLNCAYTVG---RMP-VSA 194 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHH---HHHHHHHHcCCeEEEECccccC---CcC-CCH
Confidence 567889999999998653211 12678999999999999988855 5788899999999999999842 111 121
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcH----------HHHHHHHHHh
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSS----------QTQYLLSALL 316 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~----------~~q~~~~~~l 316 (469)
.. .+..++++|+||+++ +|.|+||+++++. +.+.+.....++..+. ..+.++...+
T Consensus 195 ~~------------~~~di~v~s~sK~~~-~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 195 KE------------IGADFIVGSGHKSMA-ASGPCGVLGMSEE-WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred HH------------cCCCEEEeeCccccc-CCCCEEEEEECHH-HHhhhcccccCCccceeeeecccccccHHHHHHHHH
Confidence 11 134567799999998 6779999999655 4444443333221211 1333444444
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee--cCCceEEEEEecccccc--cCChhHHHHHHHHHHHhCCeE-E
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL--KSNAGLFCWVDMRHLLR--SNTFEAEMELWKKIVYDVKLN-I 391 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~--~~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~ll~~~GI~-v 391 (469)
.. . .++++...+.++.. +++.+.|+++|+++. .+..++|++++++.... .........+.+. |.++||. +
T Consensus 261 ~~--~-~~~l~~~~~~~~~~-~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~-L~e~GI~~i 335 (370)
T TIGR02539 261 PH--V-VERVKRWDEEVKKT-RWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEE-LKKRGIHGI 335 (370)
T ss_pred HH--H-HHHHHHHHHHHHHH-HHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHH-HHhCCCccc
Confidence 32 1 33444444555544 589999999998763 24456888898863210 0000112234444 4567997 6
Q ss_pred eCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 392 SPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 392 ~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+++ .++++|+++...+++++++++++|++++++.
T Consensus 336 r~~------~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 336 RSG------QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred cCC------cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 643 2468999974459999999999999988753
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.5e-28 Score=248.99 Aligned_cols=345 Identities=13% Similarity=0.096 Sum_probs=230.4
Q ss_pred CCCCeeeeeccc-ccc-ChHHHHHHHhcCCCccccccCCccccc-ccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 36 NPTGIIQMGLAE-NQL-SFDLLESWLDRNPDAAGFKRDGQSIFR-ELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 36 ~~~~~i~L~~~~-n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...++|||+.+. ..+ +++.+.+++.+.... .. ....|....|..++++++++++.+.++ . ++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~----------~~~~~~~~~~~~G~~~l~~~l~~~la~~~g----~-~~ 104 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDS----------HGFGMASVRFICGTQDLHKELEEKLAKFLG----T-ED 104 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHH----------cCCCCcccccccCCcHHHHHHHHHHHHHhC----C-Cc
Confidence 345689999876 334 344455555442100 00 011222346788889988888887765 2 47
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|++|+| ++++..++.+++++||.|++++|+|+.+...+... |.+++.++. .|++++++.+++......++
T Consensus 105 ~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~-~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~ 175 (397)
T PRK06939 105 AILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRLC-KAKRYRYAN-------NDMADLEAQLKEAKEAGARH 175 (397)
T ss_pred EEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhhhccCCCC
Confidence 7888888 67888889999999999999999999998888776 888887764 37788888886532222367
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|+..+.+||||...+ +++|+++|++||++||+||+|+...+.... ........ + ..+.+++++|+||
T Consensus 176 ~~v~~~~v~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~-~~~~~~~~-~------~~~~~i~~~S~sK 244 (397)
T PRK06939 176 KLIATDGVFSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENG-RGTVEHFG-V------MDRVDIITGTLGK 244 (397)
T ss_pred eEEEEecCcCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCC-CCHHHHcC-C------CCCCcEEEEECHH
Confidence 77776667899998655 677999999999999999999632222211 11111111 0 2245789999999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHh-ccc--c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATKM-SSF--G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
+++ |+|+||++++++.+ +.+... ..+ . ..++..+.++.++++.. . ...+.+++++++++++.+.|++++
T Consensus 245 ~~~--g~r~G~v~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~---~-~~~~~~~~~~~~~~~l~~~L~~~~ 317 (397)
T PRK06939 245 ALG--GASGGYTAGRKEVI-DWLRQRSRPYLFSNSLAPAIVAASIKVLELL---E-ESDELRDRLWENARYFREGMTAAG 317 (397)
T ss_pred HhC--ccCceEEEeCHHHH-HHHHHhCccccccCCCCHHHHHHHHHHHHHH---h-cCHHHHHHHHHHHHHHHHHHHHcC
Confidence 994 45999999965544 444332 221 1 12233344444444321 1 124667888899999999999988
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
+++.++.++++ ++.++.. .+..+++..++++ ||.+.++. |+. .+.+++|++++. .+++++++++++|+
T Consensus 318 ~~~~~~~~~~~-~~~~~~~------~~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 318 FTLGPGEHPII-PVMLGDA------KLAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFE 388 (397)
T ss_pred CCcCCCCCCEE-EEEECCH------HHHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 87776666554 3444321 1234677777765 99998654 432 234689999976 59999999999999
Q ss_pred HHHHhh
Q 043923 426 AFVDSI 431 (469)
Q Consensus 426 ~~l~~~ 431 (469)
+++++.
T Consensus 389 ~~~~~~ 394 (397)
T PRK06939 389 KVGKEL 394 (397)
T ss_pred HHHHHh
Confidence 998764
No 116
>PLN02721 threonine aldolase
Probab=99.97 E-value=1.4e-28 Score=245.19 Aligned_cols=334 Identities=14% Similarity=0.161 Sum_probs=219.5
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
..+|+|+.|+++.|++.+.++++.... .....|+++ ...+|++++|++++ . +.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~-~~~~l~~~la~~~~--------~--~~~~~~ 61 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANAEV------------DDDVLGYDP-TALRLEEEMAKIFG--------K--EAALFV 61 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhccC------------CCcccCCCH-HHHHHHHHHHHHhC--------C--ceeEEe
Confidence 457999999999988888888765310 111223322 36999999999996 2 234555
Q ss_pred CChHHHHHHHHHHhcC-CCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc-CCce
Q 043923 118 AGATSANETLMFCLAE-PGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR-HLKV 192 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~-~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~~ 192 (469)
+++++++..++.+++. +||.|++++|+|..... .+... |++++.+|.+ .++.+|++.+++.+++.... .+++
T Consensus 62 ~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~ 138 (353)
T PLN02721 62 PSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLG-GVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTT 138 (353)
T ss_pred cCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhc-CceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcc
Confidence 5556666677777777 99999999999865443 34555 9999999876 34678999999998732111 1378
Q ss_pred eEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeEEEEcc
Q 043923 193 KGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 193 ~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++|+++++ +||||.+++.+++++|+++|+++|+++|+||+|. ++.. ...+...+.. ....++.|
T Consensus 139 ~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~---~~~~~~~~~~~~~~~~----------~~d~~~~s 205 (353)
T PLN02721 139 RLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI---FNASVALGVPVHRLVK----------AADSVSVC 205 (353)
T ss_pred eEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh---hcchhhhCCCHHHHhh----------hCCEEEEe
Confidence 89999875 7899999999999999999999999999999986 3221 0112222222 12233457
Q ss_pred CccccCCCcceEEE-EEecCHHHHHHHHHhcccc--cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 270 LSKDLGLPGFRVGA-IYSNDDMVVAAATKMSSFG--LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 270 ~SK~~g~~GlRiG~-li~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
+||+++. ++|+ +++ ++.+.+.+....... .++...+.++..+.. + +++.+..+ +..++++.+.+.|++
T Consensus 206 ~sK~l~~---~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l-~~~~~~~~-~~~~~~~~l~~~L~~ 276 (353)
T PLN02721 206 LSKGLGA---PVGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA---L-QENVPKLE-DDHKKAKLLAEGLNQ 276 (353)
T ss_pred cccccCC---ceeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH---H-HHHHHHHH-HHHHHHHHHHHHHHh
Confidence 9999873 3576 455 455544443333221 122222222222211 1 22333333 334567889999988
Q ss_pred c-CCce-ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHH
Q 043923 347 A-GISC-LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQR 423 (469)
Q Consensus 347 ~-g~~v-~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~ 423 (469)
+ ++.+ ..+..++|+|++++.... .+..+++++|. ++||.++|+. ++++|++++. .+++++++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~ 345 (353)
T PLN02721 277 IKGLRVNVAAVETNIVYFDITDGSR----ITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSC 345 (353)
T ss_pred CCCcEEecCCccceEEEEEccCCcc----ccHHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHH
Confidence 7 6754 333345679999874210 12235666665 7799999874 4589999973 599999999999
Q ss_pred HHHHHHh
Q 043923 424 LKAFVDS 430 (469)
Q Consensus 424 L~~~l~~ 430 (469)
|++++..
T Consensus 346 l~~~~~~ 352 (353)
T PLN02721 346 FQQAALT 352 (353)
T ss_pred HHHHhhc
Confidence 9998764
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=5.3e-28 Score=244.59 Aligned_cols=339 Identities=13% Similarity=0.094 Sum_probs=227.2
Q ss_pred CCCCeeeeecccc-ccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCC---Cc----HHHHHHHHHHHHhHcCCC
Q 043923 36 NPTGIIQMGLAEN-QLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYH---GL----PAFKKALVEFMSEIRGNK 106 (469)
Q Consensus 36 ~~~~~i~L~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~----~~Lr~aia~~l~~~~~~~ 106 (469)
...++|+|+.+.. .++ ++.+.++..+... .....|++.. |. .+|++++|++++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~------------~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g------ 97 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALD------------EHGFGMSSVRFICGTQDIHKELEAKIAAFLG------ 97 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHH------------HhCCCCCCcCcccCChHHHHHHHHHHHHHhC------
Confidence 3457899999964 233 3444444333210 0012344333 54 889999999986
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 107 VTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 107 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
.+++++++|+++|+..++.+++++||.|+++.|.|+.+...+... +.+.+.++ .+|++++++.+++..
T Consensus 98 ----~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~-~~~~~~~~-------~~d~~~l~~~i~~~~ 165 (393)
T TIGR01822 98 ----TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYA-------NNDMADLEAQLKEAR 165 (393)
T ss_pred ----CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhhh
Confidence 356788889999999999999999999999999999998877766 77665543 258899999887543
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
....++++|++.+++||||.+.+ +++|+++|++||+++|+||+|+...++ ....+...... + ..+.+++
T Consensus 166 ~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~~~~~~~~~~~-~------~~~~di~ 234 (393)
T TIGR01822 166 AAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-PTGRGSHELCG-V------MGRVDII 234 (393)
T ss_pred hcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-CCCCchHHhcC-C------CCCCeEE
Confidence 22336788888888999999987 566888999999999999999633222 21122222211 0 1245688
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHh-ccc--c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSF--G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
++|+||++ +|+|+||+++++. +.+.+... ..+ . +.++..+.++.++++.. +..++.+++++++++++.+
T Consensus 235 ~~s~sK~l--~g~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~l~~ 307 (393)
T TIGR01822 235 TGTLGKAL--GGASGGFTTARKE-VVELLRQRSRPYLFSNSLPPAVVGASIKVLEML----EASNELRDRLWANTRYFRE 307 (393)
T ss_pred EEEChHHh--hCCCcEEEEeCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHH
Confidence 99999987 4679999998654 44444332 222 1 12333333444444221 1245677888999999999
Q ss_pred HHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeecC-CHHHHHH
Q 043923 343 GLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANM-SEDTLKL 419 (469)
Q Consensus 343 ~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~~-~~e~i~~ 419 (469)
.|++.|+++.++.+ .++.+.++.. .+..+++..|++ +||.+. +..|.. .+..++|++++.. +++++++
T Consensus 308 ~L~~~g~~~~~~~~-~~~~i~~~~~------~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~ 378 (393)
T TIGR01822 308 RMEAAGFDIKPADH-PIIPVMLYDA------VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDR 378 (393)
T ss_pred HHHHcCCCCCCCCC-CEEEEEeCCH------HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHH
Confidence 99988887765555 3555554421 123467777765 499998 554532 2335799999764 8999999
Q ss_pred HHHHHHHHHHhh
Q 043923 420 SMQRLKAFVDSI 431 (469)
Q Consensus 420 ~l~~L~~~l~~~ 431 (469)
++++|++++++.
T Consensus 379 ~~~~l~~~~~~~ 390 (393)
T TIGR01822 379 AVEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHHh
Confidence 999999987653
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=2.9e-28 Score=243.37 Aligned_cols=338 Identities=13% Similarity=0.109 Sum_probs=225.8
Q ss_pred CCCCeeeeeccccccC---hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 36 NPTGIIQMGLAENQLS---FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
....+|||+.| +++. ++.+.+++.+....... + .......|+......+++++++++++ .++
T Consensus 14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~---~--~~~~~~~~g~~~~~~~l~~~la~~~~---------~~~ 78 (360)
T TIGR00858 14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGA---G--STASRLVSGNSPLHEELEEELAEWKG---------TEA 78 (360)
T ss_pred CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCC---C--CCCcCcccCCcHHHHHHHHHHHHHhC---------CCC
Confidence 34568999998 4432 25566666553110000 0 00000012222234568888888774 357
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.|++++|+++.+ .++.+++++||.|+++.|+|..+...+... |++++.++. +|++.+++.+++. .++++
T Consensus 79 ~i~~~~G~~~~~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~~~~~--~~~~~ 147 (360)
T TIGR00858 79 ALLFSSGYLANV-GVISALVGKGDLILSDALNHASLIDGCRLS-GARVRRYRH-------NDVEHLERLLEKN--RGERR 147 (360)
T ss_pred EEEECchHHHHH-HHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEecC-------CCHHHHHHHHHHc--ccCCC
Confidence 888888865555 567788899999999999999998888877 999888763 4788898888642 11256
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|++++++||||...+ +++|.++|+++|++||+||+|..+.++... .+...... + +..+++++++|+||
T Consensus 148 ~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~-~-----~~~~~~i~i~s~sK 217 (360)
T TIGR00858 148 KLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDG-RGTLEHFG-L-----KPEPVDIQVGTLSK 217 (360)
T ss_pred eEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCC-CchHHhcC-C-----CccCCcEEEEechh
Confidence 88888889999998877 555888899999999999999865444321 22222211 0 12367899999999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHh-ccc--c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATKM-SSF--G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
+||++| ||++++++ +.+.+... ..+ . ..++..+.++.++++... ..+..+++++++++++.+.|++++
T Consensus 218 ~~~~~g---G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~l~~~L~~~~ 289 (360)
T TIGR00858 218 ALGSYG---AYVAGSQA-LIDYLINRARTLIFSTALPPAVAAAALAALELIQ----EEPWRREKLLALIARLRAGLEALG 289 (360)
T ss_pred hhhccC---cEEEcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999766 99998554 44433322 221 1 234444445555553221 234567889999999999999988
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
+++.++ +++++|+.++.. .+..++.+.++ ++||.+.++..++. .+++++||+++. .+++++++++++|+
T Consensus 290 ~~~~~~-~~~~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 290 FTLMPS-CTPIVPVIIGDN------ASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CccCCC-CCCEEEEEeCCH------HHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 877654 457899988642 12345666665 56999998766543 235689999986 48999999999874
No 119
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=3e-28 Score=229.97 Aligned_cols=362 Identities=17% Similarity=0.271 Sum_probs=265.2
Q ss_pred cccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccc--cccC----hHHHHHHHhcCCCccccccCCcccccccccCC
Q 043923 10 CNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAE--NQLS----FDLLESWLDRNPDAAGFKRDGQSIFRELALFQ 83 (469)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~--n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 83 (469)
+....+.+|++.=... |....++ +-|||++|. +.-. .+.++++-+...+. .....|-
T Consensus 4 ~i~~~p~DpIlgL~e~-----f~~D~R~-~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~-----------~~~k~Yl 66 (396)
T COG1448 4 KIEAAPADPILGLKEA-----FKADPRP-NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ-----------EKTKNYL 66 (396)
T ss_pred ccccCCCCchhHHHHH-----HhcCCCc-CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc-----------ccccccC
Confidence 3445677777755333 4444444 449999983 2222 24455555544322 3456799
Q ss_pred CCCCcHHHHHHHHHHHHhHcCCCCC-CCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC
Q 043923 84 DYHGLPAFKKALVEFMSEIRGNKVT-FDTSKI--VLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV 158 (469)
Q Consensus 84 ~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~~i--~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~ 158 (469)
+..|.+.+.+++++++- |...+ +..+.| +-|.|+|.||.+....+. .+..+|.+++|+|+.+..++... |.
T Consensus 67 ~i~G~~~f~~~~~~llF---G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~a-Gl 142 (396)
T COG1448 67 PIEGLPEFLEAVQKLLF---GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAA-GL 142 (396)
T ss_pred CcCCcHHHHHHHHHHhc---CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhc-CC
Confidence 99999999999999973 31111 233343 469999999999987763 45678999999999999999988 99
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~-~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
++..+|+-...+-.+|++.+...|++.+ ...+|++- ..|||||.-++.++|++|+++.++.+.+.+.|-||.+
T Consensus 143 ~v~~Y~Yyd~~~~~~df~~mla~L~~a~----~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQG-- 216 (396)
T COG1448 143 EVETYPYYDAETKGLDFDGMLADLKTAP----EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQG-- 216 (396)
T ss_pred ceeeeeccccccccccHHHHHHHHHhCC----CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhh--
Confidence 9999998544455689999998887642 33334443 3499999999999999999999999999999999998
Q ss_pred cCCC---CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEE--ecCHHHHHHH-HH-----hcccccCcH
Q 043923 238 FSSP---GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIY--SNDDMVVAAA-TK-----MSSFGLVSS 306 (469)
Q Consensus 238 ~~~~---~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li--~~~~~~~~~~-~~-----~~~~~~~s~ 306 (469)
|+.. +...+..++. ....++++.||||.||+.|-|+|++. +.+....+.+ .+ ...+.+++.
T Consensus 217 F~~GleeDa~~lR~~a~--------~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~ 288 (396)
T COG1448 217 FADGLEEDAYALRLFAE--------VGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPA 288 (396)
T ss_pred hccchHHHHHHHHHHHH--------hCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCch
Confidence 4432 2233333433 22448899999999999999999874 4444433322 21 234455666
Q ss_pred HHHHHHHHHhcCchhh---HHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHH
Q 043923 307 QTQYLLSALLSDKKFT---QNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
....+++.+|.++++- ...+..+++++.+.|..|.+.|++. .+.++..+.|||.+..+.. +.
T Consensus 289 ~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~-----------~Q 357 (396)
T COG1448 289 HGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSP-----------EQ 357 (396)
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCH-----------HH
Confidence 7888899999987643 4456678999999999999999984 4788889999999876653 45
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+.+|.+++||.+... | |+|++.+++..++.+.++|.++
T Consensus 358 V~rLree~~IY~v~s--------G--Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 358 VDRLREEFGIYLVAS--------G--RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHhccEEEecC--------C--eeeeccCChhhHHHHHHHHHhh
Confidence 778899999998732 2 9999999999999999999875
No 120
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=4.1e-28 Score=245.98 Aligned_cols=341 Identities=13% Similarity=0.131 Sum_probs=228.7
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC-CCCcEEEe
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF-DTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~-~~~~i~~t 117 (469)
+.|-|+.+.-.+.+..+.+++.+........+.. ............+.++|+++|++++ + ++++|++|
T Consensus 19 ~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~la~~~g--------~~~~~~i~~~ 87 (401)
T PRK10874 19 AGVYLDSAATALKPQAVIEATQQFYSLSAGNVHR---SQFAAAQRLTARYEAAREQVAQLLN--------APDAKNIVWT 87 (401)
T ss_pred ceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCC---cccHHHHHHHHHHHHHHHHHHHHcC--------CCCCCEEEEE
Confidence 4688887766665555555555431100000000 0000000001235788888999886 4 68899999
Q ss_pred CChHHHHHHHHHHh----cCCCCEEEEccCCCcC----hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 118 AGATSANETLMFCL----AEPGEAFLLPTPYYPG----FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 118 ~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+|+++++..++.++ +++||.|++++|.|++ +...++.. |++++.++.+. ++.+|++++++.+++
T Consensus 88 ~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~v~~v~~~~--~~~~d~~~l~~~i~~----- 159 (401)
T PRK10874 88 RGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQT-GAKVVKLPLGA--DRLPDVDLLPELITP----- 159 (401)
T ss_pred CCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHh-CCEEEEEecCC--CCcCCHHHHHHhcCc-----
Confidence 99999999999998 3789999999999865 33445555 99999999863 467899999998865
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|+...+ + .++.. .+..+++.|
T Consensus 160 -~t~lv~i~~~~n~tG~~~~~~---~i~~l~~~~g~~~ivD~a~~~g~~---~-~~~~~------------~~~d~~~~s 219 (401)
T PRK10874 160 -RTRILALGQMSNVTGGCPDLA---RAITLAHQAGMVVMVDGAQGAVHF---P-ADVQA------------LDIDFYAFS 219 (401)
T ss_pred -CcEEEEEeCCcccccCcCCHH---HHHHHHHHcCCEEEEECCcccccc---c-CCchh------------cCCCEEEEe
Confidence 889999999999999999855 588888899999999999963212 1 12211 135577889
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhc-----------------------ccccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----------------------SFGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----------------------~~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
++|.+|.+| +||++++++.+.. +.... ..++.+.+.+.++.+++.... +...
T Consensus 220 ~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~--~~g~ 294 (401)
T PRK10874 220 GHKLYGPTG--IGVLYGKSELLEA-MSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLA--DIDI 294 (401)
T ss_pred cccccCCCc--cEEEEEchHHHhc-CCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHH--HhCH
Confidence 999988666 6999886554332 21110 012334444444444443211 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC------
Q 043923 327 SENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC------ 399 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~------ 399 (469)
...+++.++.++++.+.|+++ |+.+..+..+.++++.+++. +..++.+. |.++||.+++|..+..
T Consensus 295 ~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~-------~~~~~~~~-L~~~gI~v~~g~~~~~~~~~~~ 366 (401)
T PRK10874 295 NQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV-------HHSDLVTL-LAEYGIALRAGQHCAQPLLAAL 366 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc-------CHHHHHHH-HHHCCcEEeccccchHHHHHHh
Confidence 345667777788899999887 88777655556777776531 11245544 4577999999986642
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 400 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 400 ~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
...+++|+|++. .+++|+++++++|+++++..
T Consensus 367 g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 367 GVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 125799999986 48999999999999988754
No 121
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=1.2e-27 Score=246.46 Aligned_cols=349 Identities=12% Similarity=0.101 Sum_probs=234.1
Q ss_pred CCCeeeeecc------cccc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 37 PTGIIQMGLA------ENQL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 37 ~~~~i~L~~~------~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
...+|||+++ ++.. +++.+.+++.+..... -..-..|+...++.+|++++|++++
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~---------~~sr~~~g~~~~~~ele~~lA~~~g--------- 160 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSAST---------CSSRVDGGTTKLHRELEELVARFVG--------- 160 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCC---------CccccccCCcHHHHHHHHHHHHHhC---------
Confidence 4567888875 2221 2355666666642110 0122347777889999999999996
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc-
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR- 188 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~- 188 (469)
.++.|++++|... ...++.+++++||.|++++|+|..+...++.. |++++.++.+ |++++++.+++....
T Consensus 161 ~~~ai~~~~G~~a-n~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~-Ga~v~~~~~~-------d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 161 KPAAIVFGMGYAT-NSTIIPALIGKGGLIISDSLNHNSIVNGARGS-GATIRVFQHN-------TPSHLEEVLREQIAEG 231 (489)
T ss_pred CCcEEEECCHHHH-HHHHHHHhCCCCCEEEEcchhhHHHHHHHHHc-CCeEEEEeCC-------CHHHHHHHHHhhhhcc
Confidence 4677888777554 44677889999999999999999999888877 9999999854 456677666542110
Q ss_pred CC-----ceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 189 HL-----KVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 189 ~~-----~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
.+ ..++++++++ .|++|.+.+ +++|+++|++||++||+||+|+...++ .......++..- +..+
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G-~~G~g~~~~~~v------~~~~ 301 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGRGVCELLGV------DPAD 301 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccC-CCCCchHHhcCC------Cccc
Confidence 11 2366666666 589999887 555888999999999999999743332 211122222210 1235
Q ss_pred eEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-c--cc-cCcHHHHHHHHHHh---cCchhhHHHHHHHHHHHHH
Q 043923 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-S--FG-LVSSQTQYLLSALL---SDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 263 ~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-~--~~-~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~l~~ 335 (469)
.+|+++||||+||++| ||++++++ +.+.+.... . +. ..+++...++.+.| ...+. .+...++++++++
T Consensus 302 ~dI~~~SfSKs~g~~G---G~i~~~~~-li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g-~~~~~~~~~~l~~ 376 (489)
T PLN02483 302 VDIMMGTFTKSFGSCG---GYIAGSKE-LIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDG-TNRGAQKLAQIRE 376 (489)
T ss_pred CcEEEEecchhcccCc---eEEEcCHH-HHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCcc-ccchHHHHHHHHH
Confidence 7899999999999887 99998554 445454432 1 22 12333222233333 21110 1224556788999
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC--CCCCCeEEEEeec-C
Q 043923 336 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH--CTEPGWFRVCFAN-M 412 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~--~~~~~~iRi~~~~-~ 412 (469)
+++++.+.|+++|+++.++.+++.+|+.+.... ...+++..|+ ++||.+.| ..|. +...+.+|++++. .
T Consensus 377 ~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~------~~~~~~~~Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~ 448 (489)
T PLN02483 377 NSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRECL-KQNVAVVV-VGFPATPLLLARARICISASH 448 (489)
T ss_pred HHHHHHHHHHHCCCcccCCCCCCEEEEEECCHH------HHHHHHHHHH-HCCcEEee-eCCCCCCCCCceEEEEeCCCC
Confidence 999999999999988876666677777654321 2235677777 46999997 4443 2334789999986 5
Q ss_pred CHHHHHHHHHHHHHHHHhhcccc
Q 043923 413 SEDTLKLSMQRLKAFVDSITTTL 435 (469)
Q Consensus 413 ~~e~i~~~l~~L~~~l~~~~~~~ 435 (469)
+++++++++++|+++++..+-+.
T Consensus 449 t~edId~~l~~L~~~~~~~~~~~ 471 (489)
T PLN02483 449 SREDLIKALEVISEVGDLVGIKY 471 (489)
T ss_pred CHHHHHHHHHHHHHHHHHhCcee
Confidence 99999999999999988776644
No 122
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=5.2e-28 Score=248.62 Aligned_cols=354 Identities=12% Similarity=0.135 Sum_probs=242.2
Q ss_pred CCeeeeecccc-cc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAEN-QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.++|||+.+.. .+ .++.+.+++.+..... |...-..-..|++..++.+|+++||++++ .++.|+
T Consensus 109 ~~~id~~s~~~lgl~~~~~i~ea~~~al~~~-----G~g~~g~r~~yg~~~~~~~Lee~La~~~~---------~~~~i~ 174 (481)
T PLN02822 109 KDVVNFASANYLGLIGNEKIKESCTSALEKY-----GVGSCGPRGFYGTIDVHLDCETKIAKFLG---------TPDSIL 174 (481)
T ss_pred ceEEEeECCCcCCCCCCHHHHHHHHHHHHHh-----CCCCcccCccccCHHHHHHHHHHHHHHhC---------CCCEEE
Confidence 46799997743 22 3455555555431110 00000011136677779999999999996 467899
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc---CCce
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR---HLKV 192 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~~~ 192 (469)
+++|.+ ++..++.+++++||.|++....|..+...+... |.+++.++.+ |.+.++..+++.... .+++
T Consensus 175 ~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls-~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~ 245 (481)
T PLN02822 175 YSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLS-RSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKL 245 (481)
T ss_pred ECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHc-CCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCC
Confidence 998887 578899999999999998888777777777766 8999988865 445666666543221 1234
Q ss_pred -eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 193 -KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 193 -~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
++|++..++|+||.+.+ +++|+++|++||+++|+||+|+...++... ....+... + ...+.++++.|||
T Consensus 246 ~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G-~G~~e~~~-v-----~~~~~dii~~s~s 315 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSG-RGLSEHFG-V-----PIEKIDIITAAMG 315 (481)
T ss_pred cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCC-CChHHHcC-C-----CCCCCeEEEecch
Confidence 68888888999999999 566999999999999999999855555322 12222211 0 0125678899999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhc-c--cc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMS-S--FG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~-~--~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|+||++| ||+++++. +.+.+.... . ++ ..++..+.++.++|+.. +. ..+.+++++++++++.+.|++.
T Consensus 316 Kalg~~G---G~i~g~~~-ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l---~~-~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 316 HALATEG---GFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL---ED-NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred hhhhhCC---eEEEcCHH-HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH---Hh-CHHHHHHHHHHHHHHHHHHHhc
Confidence 9999889 99999655 444443322 2 22 12355666666666332 22 2567788999999999999987
Q ss_pred -CCceecCCceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCCC--CCCCC-CCCeEEEEeec-CCHHHHHHH
Q 043923 348 -GISCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPGS--SCHCT-EPGWFRVCFAN-MSEDTLKLS 420 (469)
Q Consensus 348 -g~~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~--~f~~~-~~~~iRi~~~~-~~~e~i~~~ 420 (469)
|+++..+.+++++++.+++.... .+.....+++.++++++||.+.|+. .|+.. .+.++|++++. +++++|+++
T Consensus 388 ~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~ 467 (481)
T PLN02822 388 PGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKA 467 (481)
T ss_pred CCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHH
Confidence 88887777889999998642110 1111235678888878899999773 34321 24579999875 599999999
Q ss_pred HHHHHHHHHhhc
Q 043923 421 MQRLKAFVDSIT 432 (469)
Q Consensus 421 l~~L~~~l~~~~ 432 (469)
+++|++++++.-
T Consensus 468 ~~~l~~~~~~~~ 479 (481)
T PLN02822 468 SESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHHh
Confidence 999999987653
No 123
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.97 E-value=2.4e-28 Score=230.86 Aligned_cols=322 Identities=17% Similarity=0.235 Sum_probs=216.1
Q ss_pred cccccC-CCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChH-HHHHHHHH-Hh----cC--------CCCEEEEc
Q 043923 77 RELALF-QDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGAT-SANETLMF-CL----AE--------PGEAFLLP 141 (469)
Q Consensus 77 ~~~~~Y-~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~-~al~~~~~-~l----~~--------~gd~Vl~~ 141 (469)
.+.++| +...|++++|+..|+.++ +++++|++...++ ..|+-++. ++ .. +.-+.++|
T Consensus 59 ~D~RNY~G~l~Gipe~r~l~a~llg--------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 59 TDCRNYPGGLDGIPEARELFAELLG--------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp EBTTSS-S-SS--HHHHHHHHHHHT--------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccccCCCCccCChHHHHHHHHHHhC--------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 467899 889999999999999997 7899999866554 44443332 22 11 12479999
Q ss_pred cCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC--CCCCCCCCCHHHHHHHHHH
Q 043923 142 TPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP--SNPLGTTMSRNELNLLVNI 219 (469)
Q Consensus 142 ~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NPtG~~~s~e~l~~l~~~ 219 (469)
.|.|..+..+++.. |++.++||+++++ +|++.+++.+.+ ++.+|.++ |.| +||||.++|.|..++|+.+
T Consensus 131 vPGYDRHFai~E~~-Giemi~VpM~~dG---PDmD~Ve~LV~~----D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m 201 (425)
T PF12897_consen 131 VPGYDRHFAITEHF-GIEMIPVPMTEDG---PDMDMVEELVAE----DPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAM 201 (425)
T ss_dssp ES--HHHHHHHHHC-T-EEEEEEEETTE---E-HHHHHHHTHT----STTEEEEE-E-SSS-TTT-----HHHHHHHHHS
T ss_pred CCCchHHHHHHHhh-CcEEEecCCCCCC---CCHHHHHHHHhc----CCccceEE-eCCCccCCCCccCCHHHHHHHhcC
Confidence 99999999999887 9999999998765 899999988753 56888754 345 8999999999999999997
Q ss_pred -HHhcCeEEEEecccccccc-CCCCc---cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH
Q 043923 220 -ITEKNIHLISDEIYSGTVF-SSPGF---VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA 294 (469)
Q Consensus 220 -~~~~~~~iI~Deay~~~~~-~~~~~---~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~ 294 (469)
+...++.|+.|.+|+-..+ +.... ..+.+... .++.+++++.+.|.||.. +||.+++++.++...+...
T Consensus 202 ~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~-----~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~ 275 (425)
T PF12897_consen 202 KTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACA-----KAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWI 275 (425)
T ss_dssp --SSTT-EEEEE-TTTT-BSSSSSS------HHHHHH-----HTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHH
T ss_pred CcCCcCeEEEeecCceEeeccccccchhhhHHHHHHH-----HcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHH
Confidence 4467999999999986555 22221 24444433 356889999999999987 6999999999977776655
Q ss_pred HHHhccc-ccCcHHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHhc-C----C-ceecCCceEEEEEeccc
Q 043923 295 ATKMSSF-GLVSSQTQYLLSALLSDKK-FTQNYISENKKRLKQRHRKLVSGLEKA-G----I-SCLKSNAGLFCWVDMRH 366 (469)
Q Consensus 295 ~~~~~~~-~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~l~~~L~~~-g----~-~v~~~~~g~~~~v~~~~ 366 (469)
.+.+... ....-+.|..-.+++.+.+ -+..+++++++.++-+++.+.+.|++. | + +|..|.||+|+++++.+
T Consensus 276 ~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~ 355 (425)
T PF12897_consen 276 KKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD 355 (425)
T ss_dssp HHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST
T ss_pred HHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC
Confidence 4443322 2367799999999999976 568899999999998888888877654 3 3 89999999999999986
Q ss_pred ccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 367 LLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHCT---EPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 367 ~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~~---~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.. ....+++++.||.+.| |..|... .+..|||+.+..+.+|++.+++.+.-+++
T Consensus 356 G~A--------krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 356 GTA--------KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp T-H--------HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred ChH--------HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 543 3456678899999988 6666532 25689999998899999999999987654
No 124
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=4.1e-28 Score=240.38 Aligned_cols=321 Identities=16% Similarity=0.134 Sum_probs=217.6
Q ss_pred cccc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHH
Q 043923 47 ENQL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANE 125 (469)
Q Consensus 47 ~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~ 125 (469)
+|++ |++.+.+++.+... ....|.+.....++++.++++++ ++++++++|+++++.
T Consensus 5 ~~~~~~~~~v~~a~~~~~~-------------~~~~~~~~~~~~~l~~~~a~~~g----------~~~~~~~~~gt~a~~ 61 (338)
T cd06502 5 DTVTGPTPEMLEAMAAANV-------------GDDVYGEDPTTAKLEARAAELFG----------KEAALFVPSGTAANQ 61 (338)
T ss_pred ccCCCCCHHHHHHHHhccc-------------CCcccCCCHHHHHHHHHHHHHhC----------CCeEEEecCchHHHH
Confidence 3444 56777777765311 11256555667888888888874 456777788889999
Q ss_pred HHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh-cCCceeEEEEecCC
Q 043923 126 TLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK-RHLKVKGVLVTNPS 201 (469)
Q Consensus 126 ~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~vvl~~P~ 201 (469)
.++.+++++||.|+++.|+|..+.. ..... |++++.++.+. +.+|++++++++++... ..+++++|+++||+
T Consensus 62 ~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~ 137 (338)
T cd06502 62 LALAAHTQPGGSVICHETAHIYTDEAGAPEFLS-GVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTT 137 (338)
T ss_pred HHHHHhcCCCCeEEEecCcceeeecCCcHHHHc-CceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeec
Confidence 9999999999999999999876442 23345 99999998752 56899999998864110 01268899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE
Q 043923 202 NPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV 281 (469)
Q Consensus 202 NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi 281 (469)
|| |.+++.+++++|+++|++||+++|+||+|......... .+...+.. +..+++.|+||+||++|
T Consensus 138 n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~-~~~~~~~~----------~~d~~~~s~sK~~~~~~--- 202 (338)
T cd06502 138 EG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALG-VALKTYKS----------GVDSVSFCLSKGGGAPV--- 202 (338)
T ss_pred CC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcC-CCHHHHHh----------cCCEEEEeccccCCCcc---
Confidence 97 66779999999999999999999999998642211111 12222211 22355779999999887
Q ss_pred EEEEecCHHHHHHHHHhc-cc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 282 GAIYSNDDMVVAAATKMS-SF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 282 G~li~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+++..++.+.+.+.... .+ +..+.+.+.++...|+...+ .+..+++.++++++.+.|+++|+.+.++.+
T Consensus 203 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 276 (338)
T cd06502 203 GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLW-----LRRLRHDHEMARRLAEALEELGGLESEVQT- 276 (338)
T ss_pred ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH-----HHHHHHHHHHHHHHHHHHHhcCCCcccccC-
Confidence 555433444544444332 11 22456677777777776543 234456666778999999998887666665
Q ss_pred EEEEEecccccccCChhHHHHHHHHHH--HhCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHHH
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIV--YDVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLKA 426 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll--~~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~~ 426 (469)
.|+.+.++.. . .....+..++. .++||.+.+.. .+++|++++.. ++++++++++++++
T Consensus 277 ~~~~v~~~~~---~--~~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 277 NIVLLDPVEA---N--AVFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CeEEEecCCc---c--HHHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4555666421 0 11112333332 15699987652 26899999874 89999999998864
No 125
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.5e-27 Score=241.53 Aligned_cols=331 Identities=13% Similarity=0.144 Sum_probs=226.0
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCC-------CCcHHHHHHHHHHHHhHcCCCCCC-C
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDY-------HGLPAFKKALVEFMSEIRGNKVTF-D 110 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-------~g~~~Lr~aia~~l~~~~~~~~~~-~ 110 (469)
+.|-|+.+.-.++|..+.+++.+.... ......+... ..+.++|+++|++++ . +
T Consensus 16 ~~iyld~a~~~~~p~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--------~~~ 77 (398)
T TIGR03392 16 GTVYLDSAATALKPQAVIDATQQFYRL----------SSGTVHRSQHQQAQSLTARYELARQQVARFLN--------APD 77 (398)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHh----------cCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC--------CCC
Confidence 468888776555555566655443110 0000011111 235678999999986 4 4
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcC----hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCL----AEPGEAFLLPTPYYPG----FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
+++|++|+|+++++..++.++ +++||.|++++|.|+. +...++.. |++++.+|++. ++.+|++++++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~-g~~v~~v~~~~--~~~~~~~~l~~~i 154 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQT-GAKVVKLPIGA--DLLPDIRQLPELL 154 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHc-CcEEEEEecCC--CCCcCHHHHHHHh
Confidence 789999999999999999987 4789999999999866 33445556 99999999874 4568899999988
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
++ ++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|+...+ + ..+..+ +
T Consensus 155 ~~------~t~lv~i~~~~n~tG~~~~~~---~i~~~~~~~~~~~ivD~a~~~~~~---~-~~~~~~------------~ 209 (398)
T TIGR03392 155 TP------RTRILALGQMSNVTGGCPDLA---RAITLAHQYGAVVVVDGAQGVVHG---P-PDVQAL------------D 209 (398)
T ss_pred cc------CceEEEEECccccccccCCHH---HHHHHHHHcCCEEEEEhhhhcCCC---C-CChhhc------------C
Confidence 65 789999999999999999854 588889999999999999973211 1 222211 3
Q ss_pred eEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----------------------ccccCcHHHHHHHHHH---h
Q 043923 263 RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----------------------SFGLVSSQTQYLLSAL---L 316 (469)
Q Consensus 263 ~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----------------------~~~~~s~~~q~~~~~~---l 316 (469)
..+++.|++|.+|.+| +||++++++.+.. +.... ..++.+.+...++.++ +
T Consensus 210 ~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l 286 (398)
T TIGR03392 210 IDFYAFSGHKLYGPTG--IGVLYGKTELLEA-MPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWL 286 (398)
T ss_pred CCEEEEecccccCCCc--eEEEEEcHHHHhh-CCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHH
Confidence 4567788999988555 8999986554322 21110 0122333333333333 3
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
.+.. .++.+++..+.++++.+.|.++ |+++..+..+.++++.+++. +..++...| .++||.+++|.
T Consensus 287 ~~~g-----~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-------~~~~l~~~L-~~~gI~v~~g~ 353 (398)
T TIGR03392 287 TDID-----IAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-------HHSDLAALL-AESGIALRAGQ 353 (398)
T ss_pred HHhC-----HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-------CHHHHHHHH-HhCCEEEecCc
Confidence 3322 2445566777778888888877 77766554556777776531 122455554 57799999998
Q ss_pred CCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 396 SCHC------TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 396 ~f~~------~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+.. ..++++|+|++. .+++|+++++++|+++++..
T Consensus 354 ~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 354 HCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred cchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 6542 125799999976 49999999999999988754
No 126
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=1.8e-27 Score=240.00 Aligned_cols=340 Identities=13% Similarity=0.120 Sum_probs=232.8
Q ss_pred CCCeeeeeccc-ccc-ChHHHHHHHhcCCCccccccCCcccc-cccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 37 PTGIIQMGLAE-NQL-SFDLLESWLDRNPDAAGFKRDGQSIF-RELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 37 ~~~~i~L~~~~-n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..++|||+.+. ..+ +++.+.+++.+.... . .....|....|..++++++++++.+.++ .++.
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~----------~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g-----~~~~ 96 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQ----------YGVGAGAVRTIAGTLRLHEELEEKLAKFKK-----TEAA 96 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHH----------cCCCCCccCcccCCcHHHHHHHHHHHHHhC-----CCcE
Confidence 45789999875 234 445555555543110 0 1123566778899999999999988765 2466
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++++|+ +++..++.+++++||.|+++.|+|..+...+... |++++.++ .+|++++++.+.+.. .++++
T Consensus 97 i~~~sG~-~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~-g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~ 165 (385)
T TIGR01825 97 LVFQSGF-NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLT-KATKKIYK-------HADMDDLDRVLRENP--SYGKK 165 (385)
T ss_pred EEECcHH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhhc--cCCCe
Confidence 8888884 5666788888999999999999999887777766 88877654 257788888776421 23678
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++++||||.+.+ +++|.++|++||+++|+||+|+.+.++....... .... . ..+.++++.||||+
T Consensus 166 ~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~-~------~~~~~i~~~s~sK~ 234 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTV-HHFG-L------EDKVDIQVGTLSKA 234 (385)
T ss_pred EEEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccH-hhcC-C------CcCCcEEEEeccHH
Confidence 8888888999999988 4568999999999999999998654542211111 1111 0 24678999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhc-cc--c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMS-SF--G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~-~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
||++| ||++++++ +.+.+.... .+ . ..+++.+.++.++++... +. .+..+++.++++++.+.|++.|+
T Consensus 235 ~~~~g---G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~~-~~~~~~~~~~~~~l~~~L~~~g~ 306 (385)
T TIGR01825 235 IGVVG---GYAAGHKE-LIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ---RS-PELMERLWDNTRFFKAGLGKLGY 306 (385)
T ss_pred hhcCC---CEEecCHH-HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh---cC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 98776 99988544 444443322 12 2 234566666666664321 11 23455667788999999998898
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
++..+.+. ++++.++.. .+..+++..++++ ||.+. +..|+. .+..++|++++. .+++++++++++|++
T Consensus 307 ~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 307 DTGGSETP-ITPVVIGDE------KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCC-EEEEEECCH------HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 88777664 454544321 1233577777766 99985 444432 234689998864 599999999999999
Q ss_pred HHHh
Q 043923 427 FVDS 430 (469)
Q Consensus 427 ~l~~ 430 (469)
++++
T Consensus 378 ~~~~ 381 (385)
T TIGR01825 378 VGKE 381 (385)
T ss_pred HHHH
Confidence 9865
No 127
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=3.3e-27 Score=239.48 Aligned_cols=347 Identities=13% Similarity=0.091 Sum_probs=231.0
Q ss_pred CeeeeeccccccChHHHHHHHhcCC-CccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNP-DAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
..|+|..++|.+++. +.+++.+.. ..... + ......|....+.+.+++.+++++.+.++ .+...|+++
T Consensus 20 ~~~~~~~~~~~~~~~-v~~a~~~~~~~~~~~---g---~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~v~~~ 88 (402)
T cd00378 20 ETLELIASENFTSPA-VMEAMGSDLTNKYAE---G---YPGKRYYGGCEYVDEIEDLAIERAKKLFG----AEYANVQPH 88 (402)
T ss_pred hCeeeeccCCcCCHH-HHHHhcccccccccC---C---CCCCcccCCchHHHHHHHHHHHHHHHHhC----CCceeeecC
Confidence 468998888887654 555554321 10000 0 01233466666778888877777766655 444556666
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-----HhhhCCCEEEEeeccCC-CCcccCHHHHHHHHHHHHhcCCc
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-----LKWRTGVEIVPIQCTSL-NGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+ +++|+..++.+++++||+|+++.|+|..+... +... |.++..++++.+ .++.+|++++++++.+. +
T Consensus 89 s-gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~ 161 (402)
T cd00378 89 S-GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSAS-GKLFESVPYGVDPETGLIDYDALEKMALEF-----K 161 (402)
T ss_pred C-cHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccccc-ceeEEEecCCcCcccCCcCHHHHHHHHHhC-----C
Confidence 5 57999999999999999999999999876443 4445 887777776543 26789999999988632 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc-cccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY-SGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
++++++++|+||+ ..+ +++|+++|++||++||+|++| .++.+.+..... + . ...++++|+
T Consensus 162 ~~~v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~----------~-~~dv~~~s~ 222 (402)
T cd00378 162 PKLIVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---L----------P-GADVVTTTT 222 (402)
T ss_pred CCEEEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---c----------c-CCcEEEecc
Confidence 8889999998864 334 667999999999999999996 443333321111 1 1 123678999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhcc-cc-cCcH-HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVVAAATKMSS-FG-LVSS-QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-~~-~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
||++ +|+|.||++++++.+.+.+.+... .. ..+. ....++..++.. ....+.++.++++.++++++.+.|.+.
T Consensus 223 sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (402)
T cd00378 223 HKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVENAKALAEALKER 298 (402)
T ss_pred ccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9987 789999999977455555543322 21 1222 222222222221 111135667778899999999999999
Q ss_pred CCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC----CCCCCeEEEEeecC-----CHHHH
Q 043923 348 GISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH----CTEPGWFRVCFANM-----SEDTL 417 (469)
Q Consensus 348 g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~----~~~~~~iRi~~~~~-----~~e~i 417 (469)
|+++. .+.+++++|++++.... +. ..+.++++++||.+.++.... ...+.++|+++... +++++
T Consensus 299 g~~~~~~~~~~~~v~v~~~~~~~-----~~-~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di 372 (402)
T cd00378 299 GFKVVSGGTDNHLVLVDLRPKGI-----TG-KAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEM 372 (402)
T ss_pred CCeEeecCCCCeEEEEeCCccCC-----CH-HHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHH
Confidence 98876 45678999999974211 11 234456778899998643221 12356899998653 58999
Q ss_pred HHHHHHHHHHHHhhc
Q 043923 418 KLSMQRLKAFVDSIT 432 (469)
Q Consensus 418 ~~~l~~L~~~l~~~~ 432 (469)
+.+++.|++++++-+
T Consensus 373 ~~~~~~l~~~~~~~~ 387 (402)
T cd00378 373 EEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999887665
No 128
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.8e-27 Score=241.73 Aligned_cols=342 Identities=13% Similarity=0.099 Sum_probs=224.5
Q ss_pred Ceeeeecc-ccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 39 GIIQMGLA-ENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 39 ~~i~L~~~-~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
..++++.+ .++++ ++.+.+++.+..+...... -.....|+....+.+|++++|++++ .++.|++
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~-----~~s~~~~~~~~~~~~Le~~la~~~g---------~~~~i~~ 112 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGA-----GGTRNISGTSHPHVLLERELADLHG---------KESALLF 112 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCC-----chhhhcccChHHHHHHHHHHHHHhC---------CCCEEEE
Confidence 46677764 66664 4666666654311100000 0011123333346889999999986 3567778
Q ss_pred eCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 117 TAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 117 t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+ +++..++..+. .+||.|+++.+.|..+...+... |+++..++.+ |.+.+++.++.. ..+++++
T Consensus 113 ~sG~-~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~-g~~~~~~~~~-------d~~~l~~~l~~~--~~~~t~~ 181 (410)
T PRK13392 113 TSGY-VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRS-GAEKQVFRHN-------DLADLEEQLASV--DPDRPKL 181 (410)
T ss_pred CcHH-HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHc-CCeEEEEeCC-------CHHHHHHHHHhc--cCCCCEE
Confidence 7775 56666666664 38898888777777777777666 8888776532 455666666532 1237889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.+++ +++|.++|++||+++|+||+|+...++... ........ . .....++++|+||+|
T Consensus 182 v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g-~g~~~~~~-~------~~~~div~~tlsK~~ 250 (410)
T PRK13392 182 IAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG-GGIAERDG-L------MDRIDMIQGTLAKAF 250 (410)
T ss_pred EEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC-Cchhhhcc-C------CCCCcEEEEEChHhh
Confidence 999999999999998 555888888999999999999844343221 22221111 0 112347889999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc---c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF---G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS 350 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~---~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~ 350 (469)
|++| ||+++++ .+.+.+++.... . ..+++.+.++.++|+.... ....+++++++++++.+.|++.|++
T Consensus 251 g~~G---G~~~~~~-~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~ 322 (410)
T PRK13392 251 GCLG---GYIAASA-DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT----SQTERDAHQDRVAALKAKLNANGIP 322 (410)
T ss_pred hccc---chhhcCH-HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9888 9998854 454544444322 1 2344667777777754322 2345577888889999999999998
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
+.++.+++ +.+.++.. ....+++++|++++||.+.++..... .+..++|+++.. .+++++++++++|++++
T Consensus 323 ~~~~~~~~-~~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 323 VMPSPSHI-VPVMVGDP------TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred CCCCCCCE-EEEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 87777654 43444321 12345777777778999998754332 234689999965 49999999999999997
Q ss_pred Hhh
Q 043923 429 DSI 431 (469)
Q Consensus 429 ~~~ 431 (469)
++.
T Consensus 396 ~~~ 398 (410)
T PRK13392 396 DRL 398 (410)
T ss_pred HHc
Confidence 654
No 129
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=8.9e-27 Score=234.95 Aligned_cols=336 Identities=14% Similarity=0.130 Sum_probs=220.0
Q ss_pred CCCCeeeeeccccc-c-ChHHHHHHHhcCCCccccccCCccccc-ccccCCCCCC----cHHHHHHHHHHHHhHcCCCCC
Q 043923 36 NPTGIIQMGLAENQ-L-SFDLLESWLDRNPDAAGFKRDGQSIFR-ELALFQDYHG----LPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 36 ~~~~~i~L~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g----~~~Lr~aia~~l~~~~~~~~~ 108 (469)
....+|||+.+++. + +++.+.+++.+.... +. ....|....| ..+++++++++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------- 98 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARR----------YGAGSGGSRLVTGNSPAHEALEEELAEWFG-------- 98 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHh----------cCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------
Confidence 45678999999763 2 446666666553110 00 0111222223 3455555555553
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.++.|++++ +++++..++..++++||.|+++.|+|+.+...+... |++++.++. .|++.+++.+++.
T Consensus 99 -~~~~i~~~~-g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~i~~~--- 165 (385)
T PRK05958 99 -AERALLFSS-GYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLS-RARVRRYPH-------NDVDALEALLAKW--- 165 (385)
T ss_pred -CCcEEEECc-HHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhc---
Confidence 245555555 556666677888999999999999999998887776 999888874 2778888888641
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEc
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
.+++.++++.+++||||...+ +++|.++|++||+++|+||+|+...++... ........ + +..++++++.
T Consensus 166 ~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g-~~~~~~~~-~-----~~~~~~i~~~ 235 (385)
T PRK05958 166 RAGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQG-RGLAAEAG-L-----AGEPDVILVG 235 (385)
T ss_pred cCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCC-CchHHhhC-C-----CCCCceEEEE
Confidence 113556666677999998877 566888999999999999999754443221 11111100 0 1336789999
Q ss_pred cCccccCCCcceEEEEEecCHHHHHHHHHh-ccc--c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 269 SLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSF--G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 269 S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
|+||+||.+| ||+++++. +.+.+... ..+ . ..++....++.++++.... . ...++++.++++++.+.|
T Consensus 236 s~sK~~~~~G---g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~---~-~~~~~~~~~~~~~l~~~L 307 (385)
T PRK05958 236 TLGKALGSSG---AAVLGSET-LIDYLINRARPFIFTTALPPAQAAAARAALRILRR---E-PERRERLAALIARLRAGL 307 (385)
T ss_pred echhhcccCC---cEEEcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc---C-HHHHHHHHHHHHHHHHHH
Confidence 9999999777 99988544 44433322 122 1 1334444445555543221 1 455678888889999999
Q ss_pred HhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHH
Q 043923 345 EKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQ 422 (469)
Q Consensus 345 ~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~ 422 (469)
++.++++.++.+ .|+|+.++.. .+..+++..+. ++||.+.++..+.. .+++++||+++. .++++++++++
T Consensus 308 ~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~ 379 (385)
T PRK05958 308 RALGFQLMDSQS-AIQPLIVGDN------ERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLE 379 (385)
T ss_pred HHcCCCcCCCCC-CEEEEEeCCH------HHHHHHHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHH
Confidence 988888776655 5777887631 22345777765 56999998654432 235689999975 49999999999
Q ss_pred HHHHHH
Q 043923 423 RLKAFV 428 (469)
Q Consensus 423 ~L~~~l 428 (469)
+|++++
T Consensus 380 ~l~~~~ 385 (385)
T PRK05958 380 ALAEAL 385 (385)
T ss_pred HHHhcC
Confidence 998753
No 130
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=6.7e-27 Score=233.73 Aligned_cols=300 Identities=15% Similarity=0.169 Sum_probs=205.2
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
-+.++++++|++++ + +++++++|+++++..++.+++++||.|+++.++|......+... |++++.++.+
T Consensus 45 ~~~~l~~~la~~~g--------~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~ 113 (361)
T cd06452 45 PIKDFHHDLAEFLG--------M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERA-GLNVREVPNT 113 (361)
T ss_pred hHHHHHHHHHHHcC--------C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhc-CCEEEEEecC
Confidence 46899999999986 3 78999999999999999999999999999999887776667766 9999999988
Q ss_pred CCCCcccCHHHHHHHHHHHHhc-CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 167 SLNGFQITETAIEEAYQLAQKR-HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~-~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
.+++|.+|++.+++++++..+. ++++++|++++|+||||...+ +++|+++|+++|+++|+|++|+ ++..+ .+
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~---~g~~~-~~ 186 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEYGVPLLLNGAYT---VGRMP-VS 186 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHcCCeEEEECCcc---cCCcC-CC
Confidence 6556789999999998753211 236899999999999998866 5668888999999999999997 32211 12
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCc----------HHHHHHHHHH
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVS----------SQTQYLLSAL 315 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s----------~~~q~~~~~~ 315 (469)
... .+..++++|+||+++ ++.|+||++++++.+ +.+.+...++.++ .....++.+.
T Consensus 187 ~~~------------~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 252 (361)
T cd06452 187 GKE------------LGADFIVGSGHKSMA-ASAPIGVLATTEEWA-DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMAS 252 (361)
T ss_pred HHH------------cCCCEEEecCCcccc-CCCCeEEEEECHHHH-HHHhccccccccceeeeeccccCchHHHHHHHH
Confidence 222 245688999999998 666999999965544 4443332221111 1112222222
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec--CCceEEEEEecccccccC--ChhHHHHHHHHHHHhCCeE
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK--SNAGLFCWVDMRHLLRSN--TFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~g~~~~v~~~~~~~~~--~~~~~~~l~~~ll~~~GI~ 390 (469)
+. +..++++...+. .++.+++.+.|+++ |+++.. +...+|+.++.+...... ......++.+.|+ ++||.
T Consensus 253 l~---~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~ 327 (361)
T cd06452 253 FP---HVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELK-KRGIH 327 (361)
T ss_pred HH---HHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHH-HcCce
Confidence 21 112233333333 23447888999998 888762 223456767765211000 0011124666665 56998
Q ss_pred EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 391 ISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+.. .....++|++....++++++.++++|+++.
T Consensus 328 ~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 328 GIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 531 123458999994458999999999998765
No 131
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.2e-26 Score=231.69 Aligned_cols=295 Identities=17% Similarity=0.193 Sum_probs=206.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
.+++++.++++++ +++ +.+++++|+++++..++.+++.+||.|+++.++|.. +...++.. |++++.+|
T Consensus 34 ~~~~~~~la~~~g--------~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVFQ--------TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERY-GADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHhc--------CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHh-CCCeEEee
Confidence 4566677777765 434 457889999999999999999999999999987765 34556666 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+. ++.+|++++++.+++ .++++|++++|+||||.+++.++ |.++|+++|+++|+|++|+ ++... .
T Consensus 105 ~~~--~~~~~~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~~~~---i~~~a~~~~~~li~D~~~~---~g~~~-~ 170 (356)
T cd06451 105 KPW--GEAVSPEEIAEALEQ-----HDIKAVTLTHNETSTGVLNPLEG---IGALAKKHDALLIVDAVSS---LGGEP-F 170 (356)
T ss_pred cCC--CCCCCHHHHHHHHhc-----cCCCEEEEeccCCCcccccCHHH---HHHHHHhcCCEEEEeeehh---ccCcc-c
Confidence 874 457899999998864 27889999999999999998555 7888889999999999986 43321 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH----hc----------------cc-cc
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK----MS----------------SF-GL 303 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~----~~----------------~~-~~ 303 (469)
++.. .+..+++.|++|+++. +.++||++.+++.+.. +.. .. .. ++
T Consensus 171 ~~~~------------~~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 236 (356)
T cd06451 171 RMDE------------WGVDVAYTGSQKALGA-PPGLGPIAFSERALER-IKKKTKPKGFYFDLLLLLKYWGEGYSYPHT 236 (356)
T ss_pred cccc------------cCccEEEecCchhccC-CCCcceeEECHHHHHH-HHhcCCCCceeecHHHHHhhhcccCCCCCC
Confidence 2111 1334567789999984 4479999996654433 321 00 01 11
Q ss_pred CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccccCChhHHHHHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
.+...+.++.+++.... ...++...++..++.+++.+.|++.|+++..+. ++.++|+.++... +..+++
T Consensus 237 ~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 308 (356)
T cd06451 237 PPVNLLYALREALDLIL--EEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGV------DGDEVV 308 (356)
T ss_pred ChHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCC------CHHHHH
Confidence 23333444444443211 223456677778888999999998888776432 3455677766422 123566
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHHHHHH
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~ 429 (469)
+.|.+++||.+.+|..+. .++++|++++.. +++++++++++|+++++
T Consensus 309 ~~L~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 309 RRLMKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 666654599999987432 356999999763 89999999999998764
No 132
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=3.9e-27 Score=237.27 Aligned_cols=296 Identities=16% Similarity=0.187 Sum_probs=212.2
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCCcChHH---HHhhhCCCEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGEAFLLPTPYYPGFDR---DLKWRTGVEI 160 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~ 160 (469)
+.++|+.+|++++ .++++|++++|+++++..++.++. ++||.|++..+.|+.+.. .++.. |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~-g~~v 115 (381)
T PRK02948 45 LQVCRKTFAEMIG--------GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQ-GYTV 115 (381)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhC-CCEE
Confidence 4677788888875 578999999999999999888875 578999998866665543 45555 9999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
..++++. ++.+|++++++++++ ++++|++++|+||||.+++.+ +|.++|+++|+++|+|+++. ++.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~~~---~I~~l~~~~~~~vivD~~~~---~g~ 181 (381)
T PRK02948 116 TEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQPIA---EIGALLKKYNVLFHSDCVQT---FGK 181 (381)
T ss_pred EEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehhHH---HHHHHHHHcCCEEEEEChhh---ccc
Confidence 9999873 456899999988764 788999999999999999855 58888889999999998765 443
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHHH-----HhcccccCcHHHHHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAAT-----KMSSFGLVSSQTQYLLSA 314 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~~-----~~~~~~~~s~~~q~~~~~ 314 (469)
.+ ..+. ..+..+++.|++|.+|.+| +|++++++.. +..... ....+++++.+++.++.+
T Consensus 182 ~~-~~~~------------~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~ 246 (381)
T PRK02948 182 LP-IDVF------------EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLT 246 (381)
T ss_pred cc-cCcc------------cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHH
Confidence 22 1211 2356778899999999888 7888875542 111100 001245577888888888
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEE-----EEEecccccccCChhHHHHHHHHHHHhCCe
Q 043923 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF-----CWVDMRHLLRSNTFEAEMELWKKIVYDVKL 389 (469)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~-----~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI 389 (469)
++... .+++++.++++++.++++.+.|+++|+++.+.....+ +.+.++. . +..++...+ .++||
T Consensus 247 al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~-~------~~~~~~~~l-~~~gI 315 (381)
T PRK02948 247 AAENI---LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG-I------EGQYTMLEC-NRRGI 315 (381)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC-C------CHHHHHHhc-ccCCE
Confidence 77642 3457778889999999999999998877654321122 2222221 0 112344444 57799
Q ss_pred EEeCCCCCCC-----------------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 390 NISPGSSCHC-----------------TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 390 ~v~pg~~f~~-----------------~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+++|..+.. ...+++|+|++. .+++|++++++.|+++++...
T Consensus 316 ~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 316 AISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred EEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9998875321 114689999986 499999999999999876543
No 133
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=8.1e-27 Score=236.20 Aligned_cols=337 Identities=17% Similarity=0.144 Sum_probs=218.4
Q ss_pred CCCCeeeeecc--ccccCh--HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLSF--DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ .+.+.+ +.+.+++.+.... .. +....+..++++++++++.+.. ..
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~-------------~~-~~~~~~~~~~~~~la~~l~~~~------~~ 96 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAK-------------LI-HTSNLYYIEPQEELAEKLVELS------GM 96 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhh-------------cc-ccccccCCHHHHHHHHHHHhhc------CC
Confidence 34568999876 444443 5666666653111 10 1111123577888888887653 35
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-------CEEEEccCCCcChHHHHhhhCCCEEEE---eeccCCCCc----ccCHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPG-------EAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSLNGF----QITETA 177 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~g-------d~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~~~~----~~d~~~ 177 (469)
+++++++|+++|+..+++.+...+ ++|++..+.|.++........+..... .++. .++ ..|+++
T Consensus 97 ~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~ 174 (396)
T PRK02627 97 DKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEA 174 (396)
T ss_pred CEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHH
Confidence 899999999999999999765333 679999999987765544331322211 1111 121 127888
Q ss_pred HHHHHHHHHhcCCceeEEEEecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 256 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~ 256 (469)
+++++.+ ++++|++++++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+.. .+. ....
T Consensus 175 l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~-~~~~----- 241 (396)
T PRK02627 175 LKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAY-QHYG----- 241 (396)
T ss_pred HHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eee-hhcC-----
Confidence 8888743 789999988899999 6889999999999999999999999999986444321 121 1111
Q ss_pred cCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHH
Q 043923 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLK 334 (469)
Q Consensus 257 ~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~ 334 (469)
..+++ .||||+++ +|+|+||++++++ +.+.+.. ....+..+++.|.++.++|+.... .++.+..++...
T Consensus 242 ---~~pdi---~t~sK~~~-~G~rig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~ 312 (396)
T PRK02627 242 ---IEPDI---MTLAKGLG-GGVPIGAVLAKEK-VADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGE 312 (396)
T ss_pred ---CCCCE---EEEcchhh-CCcccEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence 11232 37999999 9999999999654 4444432 222334788899988888864322 222333333333
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CC
Q 043923 335 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 413 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~ 413 (469)
..++.+.+.+.+++........|+++|++++. +..+++..++++ ||.+.|+. .+++|++++. .+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~ 377 (396)
T PRK02627 313 YLRAKLRELLEKYPGIKEVRGLGLMIGIELDR--------PAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIIS 377 (396)
T ss_pred HHHHHHHHHHHhCCCeeeeccCcEEEEEEecC--------cHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccC
Confidence 33333444433332211222346899998831 134677777755 99999863 3679998863 59
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 043923 414 EDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l~~~ 431 (469)
++++++++++|++++++.
T Consensus 378 ~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 378 KEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998653
No 134
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=7.5e-26 Score=229.64 Aligned_cols=340 Identities=14% Similarity=0.153 Sum_probs=225.3
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCC--CCCCcHHHHHHHHHHHHhHcCCCCCCC-CCcE
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQ--DYHGLPAFKKALVEFMSEIRGNKVTFD-TSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~Lr~aia~~l~~~~~~~~~~~-~~~i 114 (469)
.+++-|+.+....++..+.+++.+........+. .....+. .....+++|+++|++++ .+ +++|
T Consensus 17 ~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~ia~~~~--------~~~~~~v 83 (403)
T TIGR01979 17 KPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVH-----RGIHTLSVRATEAYEAVREKVAKFIN--------AASDEEI 83 (403)
T ss_pred CceEEEeCccccCCCHHHHHHHHHHHHhCCCCCC-----CCccHHHHHHHHHHHHHHHHHHHHhC--------cCCCCeE
Confidence 3578888887766665566666543110000000 0000000 01245688999999986 44 6799
Q ss_pred EEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcChH----HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCL----AEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|+|+++++..++.++ .++||.|+++++.|+... ..+... |++++.++.+. ++.+|++++++++++
T Consensus 84 ~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~i~~-- 158 (403)
T TIGR01979 84 VFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERT-GATLKFIPLDD--DGTLDLDDLEKLLTE-- 158 (403)
T ss_pred EEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhc-CcEEEEEecCC--CCCCCHHHHHHHhcc--
Confidence 99999999999998875 578999999999877643 334445 99999999873 456889999998865
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++++|+||||.+++. ++|.++|+++|+++|+|++|+. ...+ ..+. ..+.+++
T Consensus 159 ----~~~lv~~~~~~~~tG~~~~~---~~i~~~~~~~~~~~ivD~a~~~---g~~~-~~~~------------~~~~d~~ 215 (403)
T TIGR01979 159 ----KTKLVAITHVSNVLGTVNPV---EEIAKLAHQVGAKVLVDGAQAV---PHMP-VDVQ------------ALDCDFY 215 (403)
T ss_pred ----CCeEEEEEcccccccccCCH---HHHHHHHHHcCCEEEEEchhhc---Cccc-cCcc------------ccCCCEE
Confidence 88999999999999999995 4588888999999999999973 2111 1221 1245688
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHhc-----------------------ccccCcHHHHHHHHHHhcCchhhH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----------------------SFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----------------------~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
+.|++|.+|.+| +|++++++..+ +.+.... ..++.+.....++..+++... .
T Consensus 216 ~~s~~K~~gp~G--~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~--~ 290 (403)
T TIGR01979 216 VFSGHKMYGPTG--IGVLYGKEELL-EQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLE--A 290 (403)
T ss_pred EEecccccCCCC--ceEEEEchHHH-hcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHH--H
Confidence 899999988666 89998865433 2221100 011233344444444442211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC----ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA-GISCLKSN----AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
...+..+++..+.++.+.+.|+++ ++++..+. .+.++.+.++.. +..++. ..|+++||.+++|..+.
T Consensus 291 ~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~-~~L~~~gI~v~~g~~~~ 362 (403)
T TIGR01979 291 IGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV-------HPHDVG-TILDEEGIAVRSGHHCA 362 (403)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCc-------CHHHHH-HHHhhCCEEEcchhhhh
Confidence 113555677777888888888877 78877553 134555666531 112343 45668899999876432
Q ss_pred C------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 399 C------TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 399 ~------~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
. ..++++|||++. .+++|+++++++|+++++.+
T Consensus 363 ~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 363 QPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 1 125789999986 38999999999999887653
No 135
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=9.9e-26 Score=230.07 Aligned_cols=341 Identities=14% Similarity=0.131 Sum_probs=226.4
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC---CCCcHHHHHHHHHHHHhHcCCCCCC-CCCc
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD---YHGLPAFKKALVEFMSEIRGNKVTF-DTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~Lr~aia~~l~~~~~~~~~~-~~~~ 113 (469)
.++|-|+.+....++..+.+++.+........ ......|.. ...+.++|+++|++++ . ++++
T Consensus 31 ~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~~ 96 (424)
T PLN02855 31 SKLVYLDNAATSQKPAAVLDALQDYYEEYNSN------VHRGIHALSAKATDAYELARKKVAAFIN--------ASTSRE 96 (424)
T ss_pred CCeEEeeCccccCCCHHHHHHHHHHHHhcCCC------CCCccchHHHHHHHHHHHHHHHHHHHcC--------CCCCCE
Confidence 35788888766666666666665531100000 000001110 1235688999999986 3 3579
Q ss_pred EEEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcCh----HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 114 IVLTAGATSANETLMFCL----AEPGEAFLLPTPYYPGF----DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
|++|+|+++++..++.++ +++||.|+++.+.|+.. ...++.. |++++.++++.++ .+|++++++++++
T Consensus 97 v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~-g~~v~~v~~~~~~--~~~~~~l~~~i~~- 172 (424)
T PLN02855 97 IVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKT-GAVLKFVGLTPDE--VLDVEQLKELLSE- 172 (424)
T ss_pred EEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHc-CCEEEEEecCCCC--CcCHHHHHHHhcc-
Confidence 999999999999998763 58899999999988753 3334455 9999999986433 4789999998865
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|+ .+..+ ..+. ..+..+
T Consensus 173 -----~t~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~a~~---~g~~~-~~~~------------~~~~d~ 228 (424)
T PLN02855 173 -----KTKLVATHHVSNVLGSILPVE---DIVHWAHAVGAKVLVDACQS---VPHMP-VDVQ------------TLGADF 228 (424)
T ss_pred -----CceEEEEeCccccccccCCHH---HHHHHHHHcCCEEEEEhhhh---cCCcC-CCch------------hcCCCE
Confidence 889999999999999999965 57888999999999999996 32221 2221 124457
Q ss_pred EEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----------------------ccccCcHHHHHHHHHHhcCchhh
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----------------------SFGLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----------------------~~~~~s~~~q~~~~~~l~~~~~~ 322 (469)
++.|++|.+|.+| +||+++++..+.. +.... ..++.+.....++.+++....
T Consensus 229 ~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~-- 303 (424)
T PLN02855 229 LVASSHKMCGPTG--IGFLWGKSDLLES-MPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLS-- 303 (424)
T ss_pred EEeecccccCCCc--cEEEEEchhhhhc-CCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHH--
Confidence 7899999877455 8999986554322 21110 012233333344444443111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC------ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN------AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~------~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
+..+++.+++..+.++++.+.|+++ |+++..+. .+.++.+.+++. ...++...|.+++||.++.|.
T Consensus 304 ~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-------~~~~v~~~L~~~~gI~v~~g~ 376 (424)
T PLN02855 304 EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-------HPTDLSTFLDQQHGVAIRSGH 376 (424)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc-------CHHHHHHHhcccCCEEEechh
Confidence 1134566777777888888888877 77776432 234666776631 122455555545599999887
Q ss_pred CCCC------CCCCeEEEEeecC-CHHHHHHHHHHHHHHHHhhc
Q 043923 396 SCHC------TEPGWFRVCFANM-SEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 396 ~f~~------~~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+.. .-++++|+|++.. +++|++++++.|+++++..+
T Consensus 377 ~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 377 HCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred hhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5432 1246899999764 89999999999999987643
No 136
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=6.8e-26 Score=228.07 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=211.2
Q ss_pred CCCeeeeecc--ccccCh--HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLSF--DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
....|||..+ .|++++ +.+.+++.+..... ......|+. ....+|.+.++++++ .+
T Consensus 26 g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~---------~~~~~~~~~-~~~~~l~~~la~~~g----------~~ 85 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL---------VHVSNLYYT-EPQEELAEKLVEHSG----------AD 85 (379)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhc---------cccccccCC-HHHHHHHHHHHhhCC----------CC
Confidence 3468999886 555543 55665555431110 001123432 234555666665543 35
Q ss_pred cEEEeCChHHHHHHHHHHhc---C----CCCEEEEccCCCcChHHHHhhhCCCEEE----EeeccCCCCccc--CHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLA---E----PGEAFLLPTPYYPGFDRDLKWRTGVEIV----PIQCTSLNGFQI--TETAIE 179 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~---~----~gd~Vl~~~P~y~~~~~~~~~~~g~~~~----~v~~~~~~~~~~--d~~~l~ 179 (469)
++++++|+++++..++.++. . +||+|++++|+|+.+...+... +.... ..++..+..+.. |++.++
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 164 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA-TGQPKYQKGFEPLVPGFSYAPYNDIESLK 164 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh-cCChhhhccCCCCCCCceeeCCCCHHHHH
Confidence 99999999999999988652 2 3799999999998877665544 33221 122221111111 788998
Q ss_pred HHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccC
Q 043923 180 EAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 258 (469)
Q Consensus 180 ~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~ 258 (469)
+.+++ ++++|+++.++||+|.. ++.+++++|.++|++|++++|+||+|.++.+.+.. .+. ....
T Consensus 165 ~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~-~~~~------- 229 (379)
T TIGR00707 165 KAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAY-EHYG------- 229 (379)
T ss_pred HHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhH-HhcC-------
Confidence 88865 78888886556677764 79999999999999999999999999875443321 111 1111
Q ss_pred CcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH
Q 043923 259 QVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQR 336 (469)
Q Consensus 259 ~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~ 336 (469)
..++++ ||||+++ +|+|+||+++++ .+.+.+... ...+..+++.|.++.++|+.... ....+.++++
T Consensus 230 -~~~d~~---t~sK~~~-~G~riG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~-----~~~~~~~~~~ 298 (379)
T TIGR00707 230 -IEPDII---TLAKGLG-GGVPIGATLAKE-EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK-----ERLLENVKEK 298 (379)
T ss_pred -CCCCEE---EEccccc-CCcccEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh-----hhHHHHHHHH
Confidence 123333 7899999 999999999964 454544432 12234678888888877753211 1234455556
Q ss_pred HHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-
Q 043923 337 HRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN- 411 (469)
Q Consensus 337 ~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~- 411 (469)
++.+.+.|++. ++... +..|+|+|+.++.. ..++.+.| .++||.+.|+. .+++|++++.
T Consensus 299 ~~~~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~~--------~~~~~~~l-~~~Gv~v~~~~------~~~lRi~~~~~ 362 (379)
T TIGR00707 299 GDYFKERLEELGKNYPNKEV-RGKGLMLGIELEAP--------CKDIVKKA-LEKGLLVNCAG------PKVLRFLPPLI 362 (379)
T ss_pred HHHHHHHHHHHHhhCCCCcc-ccCceEEEEEecCc--------HHHHHHHH-HHCCcEEeeCC------CCEEEEECCCc
Confidence 66666666554 32212 23568899987631 23455554 56799999853 4689999865
Q ss_pred CCHHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l 428 (469)
.+++++++++++|++++
T Consensus 363 ~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 363 ITKEEIDEAVSALEEAI 379 (379)
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 59999999999998763
No 137
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=3.4e-25 Score=220.43 Aligned_cols=297 Identities=15% Similarity=0.155 Sum_probs=202.7
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
...++++.++++++ . ++ .++++++++++..++.+++++||.|+++.|+|..+...+... |++++.++.
T Consensus 47 ~~~~l~~~la~~~~--------~-~~-~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~- 114 (349)
T cd06454 47 LHEELEEELAEFHG--------K-EA-ALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLS-GAKKRIFKH- 114 (349)
T ss_pred HHHHHHHHHHHHhC--------C-CC-EEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHc-CCceEEecC-
Confidence 34667777777664 2 23 455556677888888888899999999999999988777776 999988762
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 167 SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
+|++.+++.+++.. ...+++++++++|+||||...+ +++|+++|+++|+++|+|++|+...+.... ..+
T Consensus 115 ------~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~-~~~ 183 (349)
T cd06454 115 ------NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHG-RGV 183 (349)
T ss_pred ------CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCC-CCh
Confidence 36788888886532 1235788888999999999877 556888999999999999999743232111 111
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhhH
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
... .. +..+.+++++|+||.+|.+| ||+++++..+.........+ +..+...+.++.+.++...
T Consensus 184 ~~~-~~------~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--- 250 (349)
T cd06454 184 EEF-GG------LTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQ--- 250 (349)
T ss_pred hhh-cc------ccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHh---
Confidence 111 10 13367899999999998655 99988554433322222222 2345555556555554321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEP 402 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~ 402 (469)
+ .+..++++.++++.+.+.|.++|+++.++.++++.++.++.. .+..++.+.|+++ ||.+.++..... ...
T Consensus 251 ~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~ 322 (349)
T cd06454 251 G-GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDP------AKAVAFSDALLER-GIYVQAIRYPTVPRGT 322 (349)
T ss_pred c-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCCh------HHHHHHHHHHHhC-CceEEEecCCccCCCC
Confidence 1 355678888899999999998888877665656555544321 2234667777655 999998643211 224
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 403 GWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 403 ~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
+++|++++. .+++++++++++|+++
T Consensus 323 ~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 323 ARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 789999986 4999999999999864
No 138
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=2.3e-25 Score=225.75 Aligned_cols=227 Identities=20% Similarity=0.295 Sum_probs=172.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
..+|+.+ ....|++.||++.+ .+++++++|+++|+..++.+++++||.|+++.|+|+.+...+ ..
T Consensus 77 y~R~~~P-t~~~Le~~lA~leg----------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYEG----------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHhC----------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 4567765 45899999999985 456888899999999999999999999999999999997654 34
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh---cCeEEEEec
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE---KNIHLISDE 231 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~---~~~~iI~De 231 (469)
. |++++.++.. .|++++++++.+... .+++++|++++|+||||.+++.+++.+|++.|+. +++++|+||
T Consensus 146 ~-Gi~~v~~~~~------~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDe 217 (427)
T PRK07049 146 F-GVGAVGFADG------LSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDN 217 (427)
T ss_pred c-CcEEEEEeCC------CCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEEC
Confidence 4 9988777621 366778877754211 1378999999999999999999999999988654 689999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhccc--ccCcHHH
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQT 308 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~ 308 (469)
+|....+.. + + ..+..++++|+||.+| ++|+|+||+++++. +.+.+...... ..++++.
T Consensus 218 ty~~~~~~~----p---l----------~~g~divv~S~SK~~gG~~glr~G~vv~~~~-l~~~l~~~~~~~g~~ls~~~ 279 (427)
T PRK07049 218 TLLGPVFQK----P---L----------EHGADLSVYSLTKYVGGHSDLVAGAVLGRKA-LIRQVRALRSAIGTQLDPHS 279 (427)
T ss_pred CccccccCC----c---c----------ccCCCEEEEcCceeecCCCCcEEEEEECCHH-HHHHHHHHHHhcCCCCCHHH
Confidence 987542211 1 1 1145688899999998 69999999998544 54544444333 2377888
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI 349 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~ 349 (469)
++++.+.++. +..+.++..++++.+.+.|+++ ++
T Consensus 280 a~l~~r~L~t-------l~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 280 CWMLGRSLET-------LVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred HHHHHcCCCh-------HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8888777753 3444556688889999999987 44
No 139
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=2.3e-25 Score=222.11 Aligned_cols=295 Identities=16% Similarity=0.191 Sum_probs=205.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-CcC-hHHHHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTS--KIVLTAGATSANETLMFCLAEPGEAFLLPTPY-YPG-FDRDLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-y~~-~~~~~~~~~g~~~~~v 163 (469)
..++|+.++++++ ++++ .|++++|+++++..++.+++.+||++++..+. |+. +...+... |.+++.+
T Consensus 33 ~~~~~~~la~~~~--------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~-g~~~~~i 103 (355)
T TIGR03301 33 TDQVRDRLLALAG--------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYL-GIPHTDL 103 (355)
T ss_pred HHHHHHHHHHHhc--------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHc-CCceEEE
Confidence 5677888888776 3443 67889999999999999998888887766555 443 34455666 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+. ++.+|++++++++++ .++++.+++++++||||...+ +++|+++|++|++++|+|++++ ++..+
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s---~g~~~- 170 (355)
T TIGR03301 104 NFSE--YEPPDLNRIEEALAA----DPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS---FGAIP- 170 (355)
T ss_pred ecCC--CCCCCHHHHHHHHHh----CCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc---cCCcc-
Confidence 8763 456899999998864 235678888999999999988 5568889999999999998776 44322
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHHHh-------------------ccccc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKM-------------------SSFGL 303 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~~~-------------------~~~~~ 303 (469)
.++. ..+..++++|++|++ |.+| +||++++++.+.. +... ...++
T Consensus 171 ~~~~------------~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t 235 (355)
T TIGR03301 171 IDIE------------ELDVDALIASANKCLEGVPG--FGFVIARRDLLEA-SAGNARSLYLDLYDQWAYMEKTGKWRFT 235 (355)
T ss_pred cchh------------hcCccEEEecCCcccccCCc--eeEEEECHHHHHH-hhCCCCCceeeHHHHHHHhhhcCCCCCC
Confidence 2222 225667889999987 4455 7999996654433 2210 01123
Q ss_pred CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC---CceEEEEEecccccccCChhHHHHHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS---NAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
.+.+.+.++..++..... ...+++.+++++++++++.+.|+++|+++..+ .++.++|+.++.... .+..++.
T Consensus 236 ~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 310 (355)
T TIGR03301 236 PPTHTVYAFAQALEELEA-EGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPD----FDFDDFY 310 (355)
T ss_pred CcHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCc----chHHHHH
Confidence 555665655555542110 11146677788889999999999888875433 245678888874211 1122445
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEee-cCCHHHHHHHHHHHHHHH
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFA-NMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~-~~~~e~i~~~l~~L~~~l 428 (469)
.. ++++||.+.+|..+. .+++||++. ..++++++++++.|++++
T Consensus 311 ~~-l~~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 311 QE-LKERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HH-HHHCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 55 456799999986543 268999984 358999999999998753
No 140
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=3.5e-25 Score=224.77 Aligned_cols=294 Identities=13% Similarity=0.141 Sum_probs=204.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHH----hcCCCCEEEEccCCCcCh----HHHHhhhCCCE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFC----LAEPGEAFLLPTPYYPGF----DRDLKWRTGVE 159 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~----l~~~gd~Vl~~~P~y~~~----~~~~~~~~g~~ 159 (469)
..++|+++|++++. .++++|++|+|+++++..++.+ ++++||.|+++++.|++. ...++.. |++
T Consensus 69 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~ 140 (406)
T PRK09295 69 MENVRKQAALFINA-------RSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARV-GAE 140 (406)
T ss_pred HHHHHHHHHHHcCc-------CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHc-CcE
Confidence 56888999998861 1578999999999999999886 458999999999887653 3344555 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|+. .
T Consensus 141 v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~~~---~i~~~~~~~~~~vivD~a~~~---g 206 (406)
T PRK09295 141 LRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENPLA---EMIALAHQHGAKVLVDGAQAV---M 206 (406)
T ss_pred EEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCCHH---HHHHHHHHcCCEEEEEccccc---C
Confidence 99999874 456889999988864 789999999999999999954 488889999999999999973 2
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh---------------------
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--------------------- 298 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--------------------- 298 (469)
..+ ..+.. .+..+++.|++|.+|.+| +||++++++.+.. +...
T Consensus 207 ~~~-~~~~~------------~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (406)
T PRK09295 207 HHP-VDVQA------------LDCDFYVFSGHKLYGPTG--IGILYVKEALLQE-MPPWEGGGSMIATVSLTEGTTWAKA 270 (406)
T ss_pred ccc-cCchh------------cCCCEEEeehhhccCCCC--cEEEEEchHhHhh-CCCcccCCceeeeeecCCccccCCc
Confidence 221 22221 245578899999888555 8999986554322 1100
Q ss_pred ---cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC-ceEEEEEecccccccCCh
Q 043923 299 ---SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN-AGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 299 ---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~-~g~~~~v~~~~~~~~~~~ 373 (469)
...++.+.....++.+++.... +.-.+..+++.++..+++.+.|.++ ++++..+. .+..+.+.++..
T Consensus 271 ~~r~e~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~------ 342 (406)
T PRK09295 271 PWRFEAGTPNTGGIIGLGAALDYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH------ 342 (406)
T ss_pred hhhcCCCCccHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCc------
Confidence 0112344444444444443211 1123455667777778888888877 67776542 223455555531
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeecC-CHHHHHHHHHHHHHHHH
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANM-SEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~ 429 (469)
...++.. .|.++||.++.|..+.. ..++++|+|++.. +++|++.++++|+++..
T Consensus 343 -~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 343 -HAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred -CHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1123434 45788999999875542 1246899999874 89999999999988754
No 141
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=6.5e-25 Score=222.85 Aligned_cols=295 Identities=17% Similarity=0.149 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
...+|++.+|++++ .+.+++++|+++|+..+++++..+||.|++..+.|......+... |++++.++.
T Consensus 100 ~~~~le~~la~~~g----------~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTG----------FESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAA-GAQAHPFRH- 167 (407)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHC-CCeEEEecC-
Confidence 46788888888875 345688999999999999999999999999999998887777666 888876653
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 167 SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.|++.+++.+++. ++++|++++|+||||.+.+. ++|.++|+++|+++|+||+|+...++... .++
T Consensus 168 ------~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~pl---~~I~~l~~~~~~~livDea~~~g~~g~~g-~g~ 232 (407)
T PRK07179 168 ------NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAPL---ADIVDIAEEFGCVLVVDESHSLGTHGPQG-AGL 232 (407)
T ss_pred ------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCccccH---HHHHHHHHHcCCEEEEECcccccCcCCCC-Cch
Confidence 3789999988641 46788899999999999995 55888899999999999999743232221 122
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc---cc-cCcHHHHHHHHHHhcCchhh
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS---FG-LVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~---~~-~~s~~~q~~~~~~l~~~~~~ 322 (469)
....+ . .....+++.|+||++| + |+||+++++ .+.+.+..... +. +.++....++.++++..
T Consensus 233 ~~~~~-~------~~~vdi~~~S~sK~~g-~--~~G~l~~~~-~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--- 298 (407)
T PRK07179 233 VAELG-L------TSRVHFITASLAKAFA-G--RAGIITCPR-ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--- 298 (407)
T ss_pred HHhcC-C------CCCCCEEEeechHhhh-c--cCeEEEeCH-HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH---
Confidence 21111 0 1123578899999997 2 689999854 44444443321 11 12222222233333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC-CCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC-HCTE 401 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f-~~~~ 401 (469)
......+++++++++++.+.|+++|+++. +. +.++++.++.. ... +.+...|.++||.+..-... .+..
T Consensus 299 -~~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~-~~i~~l~~~~~------~~~-~~~~~~L~~~GI~~~~~~~p~~~~~ 368 (407)
T PRK07179 299 -ESADDRRARLHANARFLREGLSELGYNIR-SE-SQIIALETGSE------RNT-EVLRDALEERNVFGAVFCAPATPKN 368 (407)
T ss_pred -hcCHHHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCEEEEEeCCH------HHH-HHHHHHHHHCCceEeeecCCCCCCC
Confidence 11245677888999999999999888766 33 46777776531 112 23444455779984311100 1123
Q ss_pred CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 402 PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 402 ~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+++||+++. ++++++++++++|++++++..
T Consensus 369 ~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 369 RNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 5789999986 599999999999999887643
No 142
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=7.2e-25 Score=222.65 Aligned_cols=343 Identities=14% Similarity=0.121 Sum_probs=218.5
Q ss_pred CCeeeeeccccc-cC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAENQ-LS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..+|+|+.+..- ++ ++.+.+++.+.......... .....|.+...+.+|++++|++++ .++.++
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~-----~s~~~~g~~~~~~~l~~~la~~~g---------~~~~~~ 111 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAG-----GTRNISGTNHYHVELERELADLHG---------KEAALV 111 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCC-----CcCcCccCHHHHHHHHHHHHHHhC---------CCcEEE
Confidence 457888876332 22 45566665542111000000 001123334456888888888874 245566
Q ss_pred EeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 116 LTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+++| +++...++..+.. +++.|+.....|......+... |+++..++. .|++.+++.++.. ..++++
T Consensus 112 ~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~-~~~~~~~~~-------~d~~~le~~l~~~--~~~~~~ 180 (407)
T PRK09064 112 FTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRS-RCEKHIFRH-------NDVAHLEELLAAA--DPDRPK 180 (407)
T ss_pred ECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHc-CCcEEEECC-------CCHHHHHHHHHhc--cCCCCe
Confidence 6665 4566666666544 7777776766666665556555 777766653 2678888877632 113678
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++|+||+|.+.+ +++|.++|++||+++|+||+|+...|+... .......+ + ..+.+++++||||+
T Consensus 181 ~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~g~~~~~~-~------~~~~div~~t~sKa 249 (407)
T PRK09064 181 LIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG-GGIAERDG-L------MDRIDIIEGTLAKA 249 (407)
T ss_pred EEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC-CChHHhcC-C------CCCCeEEEEecchh
Confidence 9999999999999998 555888889999999999999833344321 12222211 0 12347889999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhc-ccc---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMS-SFG---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~-~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
||++| ||++++++ +.+.+.... .+. ..++..+.++.+.++.. .+ ....++++.++++++.+.|+++|+
T Consensus 250 ~g~~G---G~~~~~~~-~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~---~~-~~~~~~~~~~~~~~l~~~L~~~g~ 321 (407)
T PRK09064 250 FGVMG---GYIAGSAA-LVDAVRSYAPGFIFTTSLPPAIAAAALASIRHL---KE-SNEERERHQERAAKLKAALDAAGI 321 (407)
T ss_pred hhccC---ceEecCHH-HHHHHHHhCccccccCcCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99888 99998544 444444332 221 23444555554444321 21 133467788888999999999998
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
++.++.+ .++++.++.. ....++.+++++++||.+++...+.. .+.+++|++++. ++++++++++++|+++
T Consensus 322 ~~~~~~~-~iv~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 322 PVMPNES-HIVPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred CCCCCCC-CEEEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 8776655 5666766431 12345777777677999998654332 234689999976 4999999999999999
Q ss_pred HHhh
Q 043923 428 VDSI 431 (469)
Q Consensus 428 l~~~ 431 (469)
+++.
T Consensus 395 ~~~~ 398 (407)
T PRK09064 395 WARL 398 (407)
T ss_pred HHHc
Confidence 8754
No 143
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=1e-24 Score=218.16 Aligned_cols=298 Identities=11% Similarity=0.120 Sum_probs=208.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDT--SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v 163 (469)
..++|+.++++++ .++ +.|++|+|+++++..++.++..+||.+++..+.+.+. ...++.. |++++.+
T Consensus 37 ~~~~r~~la~l~~--------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~-g~~~~~v 107 (363)
T TIGR02326 37 VEQIRQQLLALAT--------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYL-GIPHHVV 107 (363)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEE
Confidence 4566777777775 444 4799999999999999999988998888777665444 3445655 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+. +..+|++.+++++++ .++++++.+++++||||..++. ++|.++|++||+++|+|++++ ++..+
T Consensus 108 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~i---~~I~~l~~~~g~~livD~~~~---~g~~~- 174 (363)
T TIGR02326 108 DTGE--VEPPDVVEVEAILAA----DPAITHIALVHCETTTGILNPI---EAVAKLAHRHGKVTIVDAMSS---FGGIP- 174 (363)
T ss_pred eCCC--CCCCCHHHHHHHHhh----CCCccEEEEEeecCCccccCcH---HHHHHHHHHcCCEEEEEcccc---ccCcc-
Confidence 9863 446789999998864 2256778899999999999995 568999999999999999876 54432
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--------------hc-----ccccC
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--------------MS-----SFGLV 304 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--------------~~-----~~~~~ 304 (469)
.++..+ +..+++.|++|+++ ++.++||++++++.+...... .. ..++.
T Consensus 175 ~~~~~~------------~~D~~~~s~~K~l~-~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~ 241 (363)
T TIGR02326 175 IDIAEL------------HIDYLISSANKCIQ-GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS 241 (363)
T ss_pred cchhhc------------CccEEEecCccccc-cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence 233222 44577899999884 333479999966544332110 00 11234
Q ss_pred cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC---CceEEEEEecccccccCChhHHHHHHH
Q 043923 305 SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS---NAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 305 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
+.+.+.++.++++.... ...+++.+++++++++++.+.|+++|+++..+ .++..+|+.++.... .+..++.+
T Consensus 242 ~~~~~~al~~al~~l~~-~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~ 316 (363)
T TIGR02326 242 PTHVVHAFAQALLELEK-EGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD----YRFADFYQ 316 (363)
T ss_pred cHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC----CCHHHHHH
Confidence 55666665555533210 11246677889999999999999888876543 344567777764211 01223455
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEe-ecCCHHHHHHHHHHHHHHHH
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCF-ANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+ +++||.+.||..+. .+++||++ +..+.+++++++++|++++.
T Consensus 317 ~L-~~~gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 317 RL-KEQGFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HH-HHCCEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 54 56799999997652 46899996 54699999999999998763
No 144
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=2.9e-25 Score=224.84 Aligned_cols=333 Identities=16% Similarity=0.127 Sum_probs=216.6
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ .+.++ ++.+.+++.+..... + .....|+...+ .+|.+.++++++ . ..+
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~-----~----~~~~~~~~~~~-~~la~~l~~~~~------~-~~~ 103 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATL-----G----HVSNLFATEPQ-IALAERLVELLG------A-PEG 103 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc-----c----CccCccCCHHH-HHHHHHHHHhCC------C-CCC
Confidence 34568999875 34443 356666665531110 0 01124654433 455555555543 1 135
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCCcccCHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNGFQITETAI 178 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~d~~~l 178 (469)
+++++++|+++|+..+++.+..+| +.|+..+++|+++........|.. +..+|. .|++.+
T Consensus 104 ~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 176 (398)
T PRK03244 104 GRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDAL 176 (398)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHH
Confidence 799999999999999999766566 467777789887754433221322 222221 267888
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHH-HHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccccc
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE-LNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~-l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~ 257 (469)
++.+.+ ++++|+++.++||+|.+++.++ +++|.++|++||+++|+||+|.++...+..+ . .....
T Consensus 177 ~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~-~~~~~------ 242 (398)
T PRK03244 177 AAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-A-HQHDG------ 242 (398)
T ss_pred HHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-h-hhhhC------
Confidence 887743 7889999888999999987655 9999999999999999999998743333211 1 11111
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
..+++ .+|||++| +|+|+||++++++ +.+.+.. ....+..+++.+.++.++|+.... ....+++.+
T Consensus 243 --~~pDi---~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~ 310 (398)
T PRK03244 243 --VTPDV---VTLAKGLG-GGLPIGACLAFGP-AADLLTPGLHGSTFGGNPVACAAALAVLDTIAS-----EGLLENAER 310 (398)
T ss_pred --CCCCE---EEEchhhh-CCcccEEEEEcHH-HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHH
Confidence 12233 38899999 9999999999655 4444433 122234678888888888652211 123445555
Q ss_pred HHHHHHHHHHhcCCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-C
Q 043923 336 RHRKLVSGLEKAGISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-M 412 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~ 412 (469)
..+++.+.|++++..+. ....|+++|+.++.. ....+...++ ++||.+.+.. .+.+|++++. +
T Consensus 311 ~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~p~~~~ 376 (398)
T PRK03244 311 LGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAR-EAGFLVNAVA------PDVIRLAPPLII 376 (398)
T ss_pred HHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHH-HCCeEEeecC------CCEEEEECCCcC
Confidence 66778888887654321 223578999998631 2234555555 6699998742 4689999877 5
Q ss_pred CHHHHHHHHHHHHHHHHhhc
Q 043923 413 SEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 413 ~~e~i~~~l~~L~~~l~~~~ 432 (469)
+++++++++++|++++++..
T Consensus 377 t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 377 TDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999997643
No 145
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=6.5e-25 Score=222.34 Aligned_cols=330 Identities=12% Similarity=0.121 Sum_probs=215.8
Q ss_pred eeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCC----cHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 40 IIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHG----LPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 40 ~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.+.|+.+....+++.+.+++.+...... ......|+...+ ..++++.++++++ .++++|+
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~ia~~~~--------~~~~~v~ 81 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRSN--------ANRGGAYESSRRADQVVDDAREAVADLLN--------ADPPEVV 81 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcC--------CCCCCCchHHHHHHHHHHHHHHHHHHHcC--------CCCCeEE
Confidence 5788877666666666666554211000 011123443323 4577888888775 4566899
Q ss_pred EeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChH----HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 116 LTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
+++|+++++..++.++ .++||+|++..|.|.+.. ..++.. |++++.++.+.+ ++.+|++++++++++
T Consensus 82 ~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~~l~~~i~~---- 155 (397)
T TIGR01976 82 FGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERA-GAKVKWARVDEA-TGELHPDDLASLLSP---- 155 (397)
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhc-CCEEEEEecccc-CCCcCHHHHHHhcCC----
Confidence 9999999998877775 689999999999887653 334445 999999998742 467899999998864
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEc
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
++++|++++|+||||.+++ +++|.++|++||+++|+|+++. .+ .....+.. .+..+++.
T Consensus 156 --~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~---~~-~~~~~~~~------------~~~d~~~~ 214 (397)
T TIGR01976 156 --RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHY---AP-HGLIDVQA------------TGADFLTC 214 (397)
T ss_pred --CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhh---cc-ccCCCHHH------------cCCCEEEE
Confidence 7899999999999999988 5558888899999999999985 22 11122211 24456678
Q ss_pred cCccccCCCcceEEEEEecCHHHHHHHHHhccc------------ccCcHHH---HHHHHHHhcCchh---------hHH
Q 043923 269 SLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF------------GLVSSQT---QYLLSALLSDKKF---------TQN 324 (469)
Q Consensus 269 S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~------------~~~s~~~---q~~~~~~l~~~~~---------~~~ 324 (469)
|++|++| .|+||++++++.+. .+...... ++.+... ..++..++.+.+. +..
T Consensus 215 s~~K~~g---~~~G~l~~~~~~~~-~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~ 290 (397)
T TIGR01976 215 SAYKFFG---PHMGILWGRPELLM-NLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVA 290 (397)
T ss_pred echhhcC---CceEEEEEcHHHHh-hCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhH
Confidence 9999885 36899998655433 22221110 1122222 2233333322110 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CceecC----CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKAG-ISCLKS----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
.+++.+++..+..+++.+.|++++ +++..+ ..+.++.+.++.. +..++.++| .++||.++.|..|..
T Consensus 291 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L-~~~gI~v~~~~~~~~ 362 (397)
T TIGR01976 291 SFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL-------PPQRVVRRL-ADQGIDAWAGHFYAV 362 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc-------CHHHHHHHH-HHCCeEEEeCccchH
Confidence 245667777778888889998874 777654 1334666666531 122456555 567999998876541
Q ss_pred ---------CCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 400 ---------TEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 400 ---------~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
...+++|||+.. .+++++++++++|
T Consensus 363 ~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 363 RLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 134689999976 4899999998864
No 146
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=5.9e-25 Score=221.43 Aligned_cols=307 Identities=16% Similarity=0.206 Sum_probs=214.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-----CC-CCEEEEccCCCcChHHH---
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-----EP-GEAFLLPTPYYPGFDRD--- 151 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-----~~-gd~Vl~~~P~y~~~~~~--- 151 (469)
.|+. .+...+++++++++... + . .++++|++|+|+++++..++.++. ++ ++.|++..+.|+.+...
T Consensus 35 ~~~~-~~~~~l~~a~~~~~~~~-~--~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~ 109 (382)
T TIGR03403 35 QFGT-ATHPAIAEALDKLYKGI-N--A-RDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF 109 (382)
T ss_pred HHHH-HHHHHHHHHHHHHHHHc-C--c-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH
Confidence 3543 35688999999888522 1 1 267899999999999999998762 45 46899988777665544
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
++.. |++++.+|++. ++.+|++++++++++ +++++++++|+||||.+++.+ +|.++|+++|+++++|+
T Consensus 110 ~~~~-G~~v~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~~---~I~~la~~~g~~~ivD~ 177 (382)
T TIGR03403 110 LESL-GVEVTYLPINE--QGTITAEQVREAITE------KTALVSVMWANNETGMIFPIK---EIGEICKERGVLFHTDA 177 (382)
T ss_pred HHHC-CCEEEEEecCC--CCCCCHHHHHHhccc------CCeEEEEEcccCCCccccCHH---HHHHHHHHcCCEEEEec
Confidence 3445 99999999874 356889999988865 788999999999999999965 57888889999999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHH-----HHhcccccCc
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAA-----TKMSSFGLVS 305 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~-----~~~~~~~~~s 305 (469)
++. ++..+ ..+. ..+..+++.|++|.+|.+| +|+++..+.. +...+ ......++++
T Consensus 178 a~~---~g~~~-~~~~------------~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~ 239 (382)
T TIGR03403 178 VQA---IGKIP-VDVQ------------KAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLN 239 (382)
T ss_pred hhh---cCCCc-cCcc------------ccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcC
Confidence 986 32221 1211 1134477889999888777 5777664332 10100 0001234567
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC---ceEEEEEecccccccCChhHHHHHHH
Q 043923 306 SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 306 ~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
.+.+.++..++... .++++..++++++.++++.+.|.++ ++++..+. ...++.+.++.. +..++..
T Consensus 240 ~~~~~al~~al~~~---~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 309 (382)
T TIGR03403 240 VPYIVAMGEAMRLA---NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV-------EGEAMLW 309 (382)
T ss_pred hHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC-------CHHHHHH
Confidence 77776666666422 3446677788888999999999876 67777653 133555666531 1223444
Q ss_pred HHHHhCCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 382 KIVYDVKLNISPGSSCHCT-----------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~-----------------~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. |.++||.++.|+.|... ..+.+|+|++. .+++|+++++++|++++++.++
T Consensus 310 ~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 310 D-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred h-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4 45779999988765310 13579999987 4999999999999999987665
No 147
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=4.1e-25 Score=221.97 Aligned_cols=289 Identities=16% Similarity=0.207 Sum_probs=200.6
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcC---CCCEEEEccCCCcChH----HHHhhhCCC
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFD-TSKIVLTAGATSANETLMFCLAE---PGEAFLLPTPYYPGFD----RDLKWRTGV 158 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~l~~---~gd~Vl~~~P~y~~~~----~~~~~~~g~ 158 (469)
...++++.++++++ .+ +++|++|+|+++++..++.++.. +||+|+++++.|.... ..++.. |+
T Consensus 44 ~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~-g~ 114 (373)
T cd06453 44 AYEAAREKVARFIN--------APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERT-GA 114 (373)
T ss_pred HHHHHHHHHHHHhC--------CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhc-Cc
Confidence 35678888888886 44 78999999999999999999877 8999999999998753 223345 99
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+++.++.+ .++.+|++++++.+.+ ++++|++++|+||||.+.+.+ +|+++|+++|++||+|++|+.
T Consensus 115 ~~~~v~~~--~~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~---~i~~~~~~~~~~li~D~a~~~--- 180 (373)
T cd06453 115 KLKVVPVD--DDGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINPVK---EIGEIAHEAGVPVLVDGAQSA--- 180 (373)
T ss_pred EEEEeecC--CCCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCCHH---HHHHHHHHcCCEEEEEhhhhc---
Confidence 99999987 3456899999998865 789999999999999999955 588888899999999999873
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc------------------
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS------------------ 300 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~------------------ 300 (469)
...+ ..+. ..+..+++.|++|.++. .++|++++++..+. .+.....
T Consensus 181 ~~~~-~~~~------------~~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (373)
T cd06453 181 GHMP-VDVQ------------DLGCDFLAFSGHKMLGP--TGIGVLYGKEELLE-EMPPYGGGGEMIEEVSFEETTYADL 244 (373)
T ss_pred Ccee-eecc------------ccCCCEEEeccccccCC--CCcEEEEEchHHhh-cCCCeecCCCccccccccccccCCC
Confidence 2111 1111 11345667799999974 56899998655433 2222110
Q ss_pred ---c--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC--ceEEEEEecccccccCC
Q 043923 301 ---F--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN--AGLFCWVDMRHLLRSNT 372 (469)
Q Consensus 301 ---~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~--~g~~~~v~~~~~~~~~~ 372 (469)
+ ++++.....++.+++.... ...++..+++.++.++++.+.|+++ ++++..+. .+.++++.++..
T Consensus 245 ~~~~~~~t~~~~~~~al~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 317 (373)
T cd06453 245 PHKFEAGTPNIAGAIGLGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI----- 317 (373)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc-----
Confidence 1 1233333333333332111 1123556667777888899999887 67766322 245677776531
Q ss_pred hhHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 373 FEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 373 ~~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
+..++.+.+ .++||.+.+|..+.. ..++++|++++. .++++++++++.|
T Consensus 318 --~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 318 --HPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred --CHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 122444554 567999988875432 235789999986 4899999998864
No 148
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=3.3e-24 Score=217.39 Aligned_cols=300 Identities=13% Similarity=0.121 Sum_probs=202.5
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
..+.+|++++|++++ .++ .++++++++|+..++..+.. +++.|+.....|......+... |+++..+
T Consensus 90 ~~~~~Le~~la~~~g---------~~~-~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~-g~~~~~~ 158 (402)
T TIGR01821 90 IPHVELEAELADLHG---------KES-ALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHS-GAEKFIF 158 (402)
T ss_pred HHHHHHHHHHHHHhC---------CCe-EEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHc-CCeEEEE
Confidence 345788888888875 233 45555558888888887764 6777776666666665666655 8877665
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+. .|++++++.++.. ...++++|++++|+||||.+.+ +++|.++|++||+++|+||+|+...++...
T Consensus 159 ~~-------~d~~~l~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g- 225 (402)
T TIGR01821 159 RH-------NDVAHLEKLLQSV--DPNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRG- 225 (402)
T ss_pred CC-------CCHHHHHHHHHhc--cCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCC-
Confidence 43 2667788777532 1125789999999999999998 555888899999999999999843343221
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc-c---ccCcHHHHHHHHHHhcCc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-F---GLVSSQTQYLLSALLSDK 319 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~~ 319 (469)
........ . ..+.+++++||||+||++| ||++++++ +.+.+..... + ...++..+.++.+.|+..
T Consensus 226 ~g~~~~~~-~------~~~~div~~t~sKa~g~~G---G~i~~~~~-~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~ 294 (402)
T TIGR01821 226 GGIAERDG-L------MHRIDIIEGTLAKAFGVVG---GYIAASRK-LIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL 294 (402)
T ss_pred Cccchhcc-C------CCCCeEEEEechhhhccCC---ceeecCHH-HHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh
Confidence 11111111 0 1134688899999999888 99988544 4444443322 1 124556666666666532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
.. . ...++.+.++++++.+.|+++|+++.++.+ .++.+.++.. ....++...+++++||.+++......
T Consensus 295 ~~---~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~i~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~~ 363 (402)
T TIGR01821 295 KE---S-QDLRRAHQENVKRLKNLLEALGIPVIPNPS-HIVPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPTV 363 (402)
T ss_pred hc---C-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-CEEEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCCC
Confidence 21 1 334555667888899999998988777665 4566665421 12345777777677999998654332
Q ss_pred -CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 400 -TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 400 -~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+..++|+++.. .+++++++++++|++++++.
T Consensus 364 ~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 364 PRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 234689999976 49999999999999998754
No 149
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=1.9e-24 Score=217.78 Aligned_cols=305 Identities=14% Similarity=0.139 Sum_probs=205.7
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
..+.++++.+|++++ .+++++++|+++++..++.+++++||.|+++.+.|......+... |++++.++.
T Consensus 63 ~~~~~l~~~lA~~~g----------~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v~~ 131 (387)
T PRK09331 63 PPIADFHEDLAEFLG----------MDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERA-GLNVREVPK 131 (387)
T ss_pred hHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeC
Confidence 357999999999986 346889999999999999999999999999999988777677766 999999998
Q ss_pred cCCCCcccCHHHHHHHHHHHHh-cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 166 TSLNGFQITETAIEEAYQLAQK-RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
+.+.++.+|++.+++++++... ..+++++|++++|+||||...+ +++|+++|+++|+++|+|++|+. +..+ .
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~---g~~~-~ 204 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTV---GRMP-V 204 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCccc---CCcC-C
Confidence 4234677899999999875311 1247899999999999998877 55588899999999999999973 2211 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--------cc-cCcHHHHHHHHHH
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--------FG-LVSSQTQYLLSAL 315 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--------~~-~~s~~~q~~~~~~ 315 (469)
+... .+..+++.|++|+++ ++.|+||++++++.+....+.... ++ ........++...
T Consensus 205 ~~~~------------~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 271 (387)
T PRK09331 205 DGKK------------LGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMAS 271 (387)
T ss_pred CHHH------------cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHH
Confidence 2221 245678899999998 566999999965544332222111 11 1111111111122
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec--CCceEEEEEecccccc--cCChhHHHHHHHHHHHhCCeE
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK--SNAGLFCWVDMRHLLR--SNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~ll~~~GI~ 390 (469)
+ +...+..+ ..++..++.+++.+.|+++ |+++.. +....++.++.+.... ........++.+.| +++||.
T Consensus 272 l---~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~ 346 (387)
T PRK09331 272 F---PHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIH 346 (387)
T ss_pred H---HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCce
Confidence 2 11122232 3344455667889999999 888773 2233566666652110 00001112455555 567998
Q ss_pred EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 391 ISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
..+.. ....+|+.....+++++++++++|++++++.
T Consensus 347 ~~~~~-----~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 347 GIKPG-----ATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred EEccC-----CceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 44321 2445777764469999999999999998764
No 150
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=4.3e-24 Score=214.12 Aligned_cols=300 Identities=15% Similarity=0.170 Sum_probs=205.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDT--SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~ 162 (469)
-..++++.++++++ .++ +.|++++|+++++..++.++..+||.|++..++|.+. ...++.. |++++.
T Consensus 38 ~~~~~~~~l~~l~~--------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~-g~~~~~ 108 (368)
T PRK13479 38 LTASVRAKLVAIAT--------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYL-GIAHVV 108 (368)
T ss_pred HHHHHHHHHHHHhC--------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHc-CCcEEE
Confidence 35777788888775 333 5688999999999999999999999999998887655 3556666 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+. ++.+|++++++++++ .+++++|++++|+||||...+.+ +|.++|+++|+++|+|+++. ++..+
T Consensus 109 i~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~~~---~i~~l~~~~~~~livDa~~~---~g~~~ 176 (368)
T PRK13479 109 LDTGE--DEPPDAAEVEAALAA----DPRITHVALVHCETTTGILNPLD---EIAAVAKRHGKRLIVDAMSS---FGAIP 176 (368)
T ss_pred EECCC--CCCCCHHHHHHHHHh----CCCCcEEEEEcccCccccccCHH---HHHHHHHHcCCEEEEEcccc---cCCcc
Confidence 99863 356889999998864 12567889999999999999955 58888899999999996654 54332
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHHHhc-c------------------cc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKMS-S------------------FG 302 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~~~~-~------------------~~ 302 (469)
.++... +..+++.|++|++ |.+| +||++++++.+.. +.... . ..
T Consensus 177 -~~~~~~------------~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (368)
T PRK13479 177 -IDIAEL------------GIDALISSANKCIEGVPG--FGFVIARRSELEA-CKGNSRSLSLDLYDQWAYMEKTGQWRF 240 (368)
T ss_pred -cccccc------------CceEEEecCccccccCCC--ceEEEECHHHHHH-hhcCCCCeeecHHHHHhhhcccCCCCC
Confidence 222221 3446678999976 5666 6999996654433 22111 0 01
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccccCChhHHHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
+.+.....++.+++..... ..++++..+++.++++++.+.|+++|+++..+. .+..+.+.++.... .+..++
T Consensus 241 t~~~~~~~~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 315 (368)
T PRK13479 241 TPPTHVVAAFYQALLELEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPA----YDFKEF 315 (368)
T ss_pred CCcHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCC----cCHHHH
Confidence 3444444444444432110 112466678889999999999999998765332 21223333332110 112245
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ecCCHHHHHHHHHHHHHHHHhhc
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCF-ANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
..++. ++||.+.+|..+ ..+++|++. +..+++++++++++|++++++..
T Consensus 316 ~~~L~-~~gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 316 YERLK-EQGFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred HHHHH-HCCEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 66655 569999988644 246899986 65699999999999999998664
No 151
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=4.5e-24 Score=215.85 Aligned_cols=310 Identities=15% Similarity=0.122 Sum_probs=223.4
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVP 162 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~ 162 (469)
.+..++.+++.+.+.+.++ .+. +.+++++|+++++..++..++++||+|++.++.|... ...++.. |++++.
T Consensus 38 ~~~~~~~~~~~~~l~~~~g----~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~-g~~v~~ 112 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFK----TKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRL-NFDVDV 112 (401)
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHc-CCceEE
Confidence 3557788888888777766 344 4688899999999999999999999999999888655 3555666 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+.. ..+|++++++++++. ..+++++|++++++||||.+++.+++.++++ |+++|+++|+|++++ ++..+
T Consensus 113 v~~~~~--~~~~~~~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s---~g~~~ 184 (401)
T PLN02409 113 VESPWG--QGADLDILKSKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSS---IGALD 184 (401)
T ss_pred EECCCC--CCCCHHHHHHHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccc---cCCcc
Confidence 998643 247889999988741 0126899999999999999999888777766 999999999999987 33221
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc------------------c--cc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS------------------S--FG 302 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~------------------~--~~ 302 (469)
..+. ..+..+++.|.+|+++.| .++||++.+++.+.. +.... . ..
T Consensus 185 -id~~------------~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
T PLN02409 185 -FRMD------------EWGVDVALTGSQKALSLP-TGLGIVCASPKALEA-SKTAKSPRVFFDWADYLKFYKLGTYWPY 249 (401)
T ss_pred -cccc------------ccCccEEEEcCccccCcC-CCcceeEECHHHHHH-HhcCCCCCeecCHHHHHHHHhcCCCCCC
Confidence 1111 224557778889999744 479999986655433 22110 0 11
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceEEEEEecccccccCChhHHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGLFCWVDMRHLLRSNTFEAEME 378 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~----~g~~~~v~~~~~~~~~~~~~~~~ 378 (469)
+++...+.++..+++... +..++..++++++..+++.+.|+++|+++..+. .+..+++.++...+ ..+
T Consensus 250 Tp~~~~~~al~~al~~~~--~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~------~~~ 321 (401)
T PLN02409 250 TPSIQLLYGLRAALDLIF--EEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGID------SAE 321 (401)
T ss_pred CccHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCC------HHH
Confidence 344455555555554321 233677788889999999999998888876542 22446677764322 225
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+...+++++||.+.+|.. ......|||+... .+++++..++.+|++++++...
T Consensus 322 l~~~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 322 IVKNAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred HHHHHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 667788899999998863 2245789999866 5999999999999999987653
No 152
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=9.3e-25 Score=216.99 Aligned_cols=316 Identities=13% Similarity=0.130 Sum_probs=220.0
Q ss_pred ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHH
Q 043923 51 SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFC 130 (469)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~ 130 (469)
++..+.+++....+. ....|....+..++++++++++.+.++. +.+.+++++|+|+++++..++.+
T Consensus 11 ~~~~~~~~~~~~~n~------------~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~~t~ggt~a~~~al~~ 76 (345)
T cd06450 11 PPALLLEMLTSAKNA------------IDFTWDESPAATEMEAEVVNWLAKLFGL--PSEDADGVFTSGGSESNLLALLA 76 (345)
T ss_pred HHHHHHHHHHHhcCC------------CCcccccCchhHHHHHHHHHHHHHHhCC--CCCCCCEEEeCChhHHHHHHHHH
Confidence 445566666654322 1233777788899999999999888762 22456899999999999999988
Q ss_pred hcC------------C--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 131 LAE------------P--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 131 l~~------------~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+.. + ++.|+++.++|..+...+... |.+++.+|++++ +.+|++++++++++....+.++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~-g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~ 153 (345)
T cd06450 77 ARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL-DVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVV 153 (345)
T ss_pred HHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH-hcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEE
Confidence 742 2 348888999999888888877 999999998753 37899999999976444455678889
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.+.+ +++|+++|+++|+++++|++|+.+.+........ . .. ..+...+..|++|+++
T Consensus 154 ~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~-~~-------~~~~d~~~~s~~K~l~- 219 (345)
T cd06450 154 ATAGTTDTGAIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL--D-FG-------IERVDSISVDPHKYGL- 219 (345)
T ss_pred EecccCCCCCCCC---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH--h-cC-------ccccCEEEEchhHhhC-
Confidence 9999999999866 5668899999999999999998654322111110 0 00 1133455679999775
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec-C
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK-S 354 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~-~ 354 (469)
++.++|+++.+ .+.+.++...+... .+++.+++..+.++++.+.|.++ ++++.. +
T Consensus 220 ~p~g~g~~~~~------------------~~~~~~~l~~l~~~-----g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 276 (345)
T cd06450 220 VPLGCSAVLVR------------------ALKLWATLRRFGRD-----GYGEHIDRIVDLAKYLAELIRADPGFELLGEP 276 (345)
T ss_pred CCcchHHHHHH------------------HHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Confidence 77788887763 33444444444332 24666777777888899999887 676654 4
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-C-CHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-M-SEDTLKLSMQRLKA 426 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~-~~e~i~~~l~~L~~ 426 (469)
.. .++.+.++.... .-.+..++.+.|. ++|+.+.++..+. .++++|++++. . +++++++++++|++
T Consensus 277 ~~-~iv~f~~~~~~~--~~~~~~~i~~~L~-~~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 277 NL-SLVCFRLKPSVK--LDELNYDLSDRLN-ERGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ce-eEEEEEECCcch--hhHHHHHHHHHHH-hcCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 44 455555553100 0012234555554 6666666554443 45789999986 3 89999999999976
No 153
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=4.2e-24 Score=215.70 Aligned_cols=277 Identities=18% Similarity=0.166 Sum_probs=186.7
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCC----EEEEccCCCcChHHHHhhhCCCEEEE---eeccCCCCcc----cCH
Q 043923 111 TSKIVLTAGATSANETLMFCL----AEPGE----AFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSLNGFQ----ITE 175 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l----~~~gd----~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~~~~~----~d~ 175 (469)
.+++++++|+++|+..+++++ ..+|| +|++.++.|+++...+....+..... .|.. .++. .|+
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 165 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV--PGFDQVPFGDI 165 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC--CCceEeCCCCH
Confidence 578999999999999998876 34565 89999999998876655442322111 0111 1222 478
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
+.+++.+++ ++++|+++.++||+| .++|.+.+++|.++|++||+++|+||+|.++.+.+..+ .. ....
T Consensus 166 ~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~-~~~~--- 234 (389)
T PRK01278 166 EALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AH-EWAG--- 234 (389)
T ss_pred HHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-ee-cccC---
Confidence 899888764 788888886688888 78999999999999999999999999999754434321 11 1111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcC---chhhHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSD---KKFTQNYISEN 329 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~ 329 (469)
..+. +.|+||.++ +|+|+||++++++ +.+.+..... ..+.+++.|.++.+.|+. .++ .++++++
T Consensus 235 -----~~pd---i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~-~~~~~~~ 303 (389)
T PRK01278 235 -----VTPD---IMAVAKGIG-GGFPLGACLATEE-AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGF-LDNVQRM 303 (389)
T ss_pred -----CCCC---EEEEehhcc-CCcceEEEEEcHH-HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHH-HHHHHHH
Confidence 1112 348999998 9999999999654 4443332221 123677888887666643 222 3344444
Q ss_pred HHHHHHHHHHHHHHHHhcC-C-ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEE
Q 043923 330 KKRLKQRHRKLVSGLEKAG-I-SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 407 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~g-~-~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi 407 (469)
.++++++.+.+.+ +.. + ....+ .|.++|++++. +..+++.+++++ ||.+.|+. .+++|+
T Consensus 304 ~~~l~~~l~~l~~---~~~~~~~~v~g-~G~~~~i~~~~--------~~~~~~~~l~~~-GV~~~p~~------~~~lR~ 364 (389)
T PRK01278 304 GLYLKQKLEGLVD---RFPDVIEEVRG-KGLLLGLKCVV--------PNRDLVQALRDE-GLLTVGAG------DNVVRL 364 (389)
T ss_pred HHHHHHHHHHHHh---hCCCceeeEec-ccEEEEEEEec--------CHHHHHHHHHHC-CeEEeecC------CCEEEE
Confidence 5555544443322 222 2 22233 56888887742 133577777755 99999873 468999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHHHh
Q 043923 408 CFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 408 ~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+++. ++++++++++++|++++++
T Consensus 365 ~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 365 LPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHh
Confidence 9765 5999999999999998864
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=3.5e-24 Score=217.07 Aligned_cols=327 Identities=15% Similarity=0.134 Sum_probs=218.0
Q ss_pred CCeeeeeccccccChHH-HHHHHhcCCCccccccCCcccccccccCCC-----CCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAENQLSFDL-LESWLDRNPDAAGFKRDGQSIFRELALFQD-----YHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.++++|+++...++++. +.++..+. . ....|.+ ..|.+++++++++++.+.++ .+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g----~~~ 81 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-E-------------FYTAYTPYQPEISQGRLQALFELQTMLCELTG----MDV 81 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-c-------------CcccCCCCChhhhhhHHHHHHHHHHHHHHHHC----CCc
Confidence 35699999998887544 44444332 1 1123444 57899999999999998876 455
Q ss_pred CcEEEeC-ChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCC----CEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 112 SKIVLTA-GATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTG----VEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 112 ~~i~~t~-G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+++++++ |++++...++.++..+ ||.|++++|.|+.+...+... | ++++.++.+. ++.+|++++++++.+
T Consensus 82 ~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~-~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 158 (398)
T cd00613 82 ANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTR-GEPLGIEVVEVPSDE--GGTVDLEALKEEVSE 158 (398)
T ss_pred cceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHh-cccCCcEEEEeccCC--CCCcCHHHHHHhcCC
Confidence 5676666 5555655566666666 999999999999998877765 6 8999888763 456889999988754
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
++++|++++|+ |||.+. +.+++|.++|++||+++|+|+++.... .. .... ..+..
T Consensus 159 ------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~--~~--~~~~------------~~~~d 213 (398)
T cd00613 159 ------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT--GL--KPPG------------EYGAD 213 (398)
T ss_pred ------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc--CC--CChH------------HcCCC
Confidence 78999999885 899984 346889999999999999999875321 11 1111 22467
Q ss_pred EEEccCccccCCC----cceEEEEEecCHHHHHHHHH------------------------------hcc--cccCcHHH
Q 043923 265 HIVYSLSKDLGLP----GFRVGAIYSNDDMVVAAATK------------------------------MSS--FGLVSSQT 308 (469)
Q Consensus 265 i~i~S~SK~~g~~----GlRiG~li~~~~~~~~~~~~------------------------------~~~--~~~~s~~~ 308 (469)
+++.|++|++ +| |+|+||++.++..+. .+.. ... +.......
T Consensus 214 ~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~ 291 (398)
T cd00613 214 IVVGNLQKTG-VPHGGGGPGAGFFAVKKELVR-FLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLA 291 (398)
T ss_pred EEEeeccccC-CCCCCCCCceeEEEEhhhhHh-hCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHH
Confidence 8889999998 56 799999999654433 2100 000 11011223
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEE--EEEecccccccCChhHHHHHHHHHHHh
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF--CWVDMRHLLRSNTFEAEMELWKKIVYD 386 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~--~~v~~~~~~~~~~~~~~~~l~~~ll~~ 386 (469)
+.+...+.... ...+++.+++++++++++.+.|++++... .+.+.++ ++++++... . .+..+++..|+ +
T Consensus 292 ~~a~~~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~L~-~ 362 (398)
T cd00613 292 LMAAMYIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLY---G-IRAEDLAKALI-D 362 (398)
T ss_pred HHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcc---h-HHHHHHHHhhh-h
Confidence 33333222221 33466778889999999999999875443 2223333 566665310 0 12345666665 5
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
+||.+.... +...+.+|+++.. .+++|+++++++|
T Consensus 363 ~gi~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 363 GGFHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cCccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 699764321 2235789999977 4999999998764
No 155
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=5.6e-24 Score=214.82 Aligned_cols=218 Identities=17% Similarity=0.171 Sum_probs=162.4
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh----hhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK----WRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~----~~~g~~~~~ 162 (469)
...+|++.+|++++ .+.+++++|+++|+..++.+++++||.|+++.|.|..+...+. ...|++++.
T Consensus 77 t~~~LE~~lA~l~g----------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 77 TVLNLGRQMAALEG----------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 56899999999885 4567899999999999999999999999999999988866542 213888777
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |++++++++++ .++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+
T Consensus 147 ~d~~-------d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~---- 207 (418)
T PLN02242 147 VDIT-------DLEAVKKAVVP-----GKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVL---- 207 (418)
T ss_pred cCCC-------CHHHHHHhcCc-----CCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCC----
Confidence 6542 78888888754 14899999999999999986 56688899999999999999975432
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcce-EEEEEecCHHHHHHHHHhcc----cccCcHHHHHHHHHHhc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFR-VGAIYSNDDMVVAAATKMSS----FGLVSSQTQYLLSALLS 317 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR-iG~li~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~l~ 317 (469)
....+ +.+++++|+||.++.+|.+ .||+++++..+ +.+..... ....+...|.+...++.
T Consensus 208 --~~~~~------------g~divv~S~SK~l~g~g~~~gG~iv~~~~li-~~l~~~~~~~~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 208 --SPARL------------GADVVVHSISKFISGGADIIAGAVCGPAELV-NSMMDLHHGALMLLGPTMNPKVAFELSER 272 (418)
T ss_pred --CHHHc------------CCcEEEEeCccccCCCCCceEEEEEcCHHHH-HHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence 11111 4568899999999888887 58988865544 33433321 22233445555555544
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
.. . +..+.+++.++++.+.+.|++++++|..
T Consensus 273 l~-t----l~~r~~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 273 LP-H----LSLRMKEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred CC-c----HHHHHHHHHHHHHHHHHHHHhCCCEEEC
Confidence 32 2 4456678889999999999998877763
No 156
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=3.8e-24 Score=213.59 Aligned_cols=295 Identities=15% Similarity=0.223 Sum_probs=200.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~ 154 (469)
+.+|+.+ ...+|++++|++++ . +..++++|+++|+..++ .++++||.|+++.|.|+.... .+..
T Consensus 46 y~r~~~p-t~~~le~~la~l~g--------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 113 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLEG--------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKK 113 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhc
Confidence 4566655 46899999999986 2 23477888899999876 577899999999999987533 3344
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++.. |++.+++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|.
T Consensus 114 ~-G~~v~~vd~~-------d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 114 W-NVRFVYVNTA-------SLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred c-CceEEEECCC-------CHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCc
Confidence 5 9999888742 77889888865 7899999999999764 5678889999999999999999996
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC-CcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~ 311 (469)
...+. . + + ..+..++++|+||.++- ++++.|++++++..+.+.+...+.. ..++++.+++
T Consensus 177 ~~~~~-~---p---~----------~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l 239 (366)
T PRK08247 177 TPVLQ-R---P---L----------EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWL 239 (366)
T ss_pred ccccc-C---c---h----------hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHH
Confidence 33221 1 1 1 12466899999999963 3579999998655555544433322 2356677777
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-e-ecCCceEEEEEecccccccCChhHHHH---HHHHHHH
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-C-LKSNAGLFCWVDMRHLLRSNTFEAEME---LWKKIVY 385 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v-~~~~~g~~~~v~~~~~~~~~~~~~~~~---l~~~ll~ 385 (469)
+.+.++. +..+.++.+++++.+.+.|+++ ++. | .|+.+|+|.| .+........+.+... ++..+..
T Consensus 240 ~~~~l~t-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~~~~~~~~~l~~~~~~~slg~ 311 (366)
T PRK08247 240 LIRGMKT-------LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEEWVNPFLKSLKLITFAESLGG 311 (366)
T ss_pred HHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHHHHHHHHHcCCcceEccCCCC
Confidence 7666653 3344556688889999999987 665 4 4447888876 5642100000000000 1111112
Q ss_pred hCCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 386 DVKLNISPGSSCHCT-----------EPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~-----------~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
...+.+.|++.++.. .++.+|++++. |+.+.+++.|+++++.
T Consensus 312 ~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 312 VESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 335666787654321 24689999995 6678888888888764
No 157
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=7.2e-24 Score=215.85 Aligned_cols=345 Identities=15% Similarity=0.099 Sum_probs=214.0
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ .+.+. ++.+.+++.+.. .....|+...+..++...+++.+.+.++ ...
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~ 96 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQL-------------AKLTHFSLGFFYNEPAVELAELLLALTP----EGL 96 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHH-------------HhCcCccCcccCCHHHHHHHHHHHHhCC----CCC
Confidence 34568999876 44453 455666655531 2223444332345555666666655443 357
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCC----CCccc
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSL----NGFQI 173 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~----~~~~~ 173 (469)
+.+++++|+++|+..++..+. .+++.|++.+|+|++.........+ .+++.+|.+.. ..+..
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 899999999999999998873 5789999999999886544332212 23556665421 12445
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
|++.+++.+++. ..++++ ++++| +|++|.++ +.+.+++|.++|++||+++|+||+|.++...+.. ...+...
T Consensus 177 d~~~l~~~l~~~---~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~--~~~~~~~ 250 (413)
T cd00610 177 DLEALEEALEEH---PEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM--FAFEHFG 250 (413)
T ss_pred HHHHHHHHHhcC---CCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch--hhHhhcC
Confidence 788888887641 124554 45556 56779876 6777999999999999999999999864222221 1111111
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHH--HHhc--ccccCcHHHHHHHHHHhcCchhhHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAA--TKMS--SFGLVSSQTQYLLSALLSDKKFTQNYIS 327 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~--~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 327 (469)
.... +.|+||+++ .|+|+||++++ +.+.+.+ .... ..+..+++.+.++.+.|+... + .
T Consensus 251 --------~~~d---~~t~sK~l~-~g~~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~---~--~ 312 (413)
T cd00610 251 --------VEPD---IVTLGKGLG-GGLPLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLE---E--E 312 (413)
T ss_pred --------CCCC---eEEEccccc-CccccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h--c
Confidence 1122 348999998 68999999985 4454443 2222 122356677777666653211 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCCCCCCCCC
Q 043923 328 ENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPGSSCHCTE 401 (469)
Q Consensus 328 ~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~ 401 (469)
...+++.++.+++.+.|+++ ++.......|.++|+.++..... ........+++.++ ++||.+.|+.
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~------ 385 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG------ 385 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC------
Confidence 33445555556666666554 22222234568888888642100 00122335566555 6699999874
Q ss_pred CCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 402 PGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 402 ~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
.+++|++++. .+++++++++++|.+++
T Consensus 386 ~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 386 GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 4679999876 48999999999998763
No 158
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=8.2e-24 Score=212.93 Aligned_cols=295 Identities=14% Similarity=0.153 Sum_probs=203.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEccCCCcChHHH---HhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA---EPGEAFLLPTPYYPGFDRD---LKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~ 161 (469)
..++|+.++++++ +++++|++|+|+++++..++.++. .+||.|++....|+.+... ++.. |++++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~-G~~v~ 114 (379)
T TIGR03402 44 VEEAREQVAKLLG--------AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVT 114 (379)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHc-CCEEE
Confidence 4566777777775 568899999999999999888763 4568899988888766433 3344 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.+|.+. ++.+|++++++++++ +++++++++++||||.+++.+ +|.++|+++|+++++|++++ ++..
T Consensus 115 ~v~~~~--~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~---~g~~ 180 (379)
T TIGR03402 115 YLPVDE--EGRLDLEELRAAITD------DTALVSVMWANNETGTIFPIE---EIGEIAKERGALFHTDAVQA---VGKI 180 (379)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEEcccCCeeecccHH---HHHHHHHHcCCEEEEECccc---cccc
Confidence 999863 346899999998864 789999999999999999965 58888999999999999997 3322
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-HH-----HHhcccccCcHHHHHHHHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-AA-----TKMSSFGLVSSQTQYLLSAL 315 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~-~~-----~~~~~~~~~s~~~q~~~~~~ 315 (469)
+ ..+. ..+..+++.|.+|.+|.+| +|+++..+..... .. ......++.+.+...++.++
T Consensus 181 ~-~~~~------------~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~a 245 (379)
T TIGR03402 181 P-IDLK------------EMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKA 245 (379)
T ss_pred c-cCcc------------cCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHH
Confidence 1 2221 1244577778899776555 7787765432100 00 00011233444444444444
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-CCceecCC-----ceEEEEEecccccccCChhHHHHHHHHHHHhCC
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A-GISCLKSN-----AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVK 388 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-g~~v~~~~-----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~G 388 (469)
++- ..++++...+++++.++++.+.|.+ + ++.+..+. +...+|+.... ..++.. .|+++|
T Consensus 246 l~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~l~~~g 312 (379)
T TIGR03402 246 AEL---ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE---------GEAILL-LLDMEG 312 (379)
T ss_pred HHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC---------HHHHHH-hhccCC
Confidence 432 2345666677888888889988875 4 66665432 22334443221 123444 456789
Q ss_pred eEEeCCCCCCCCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 389 LNISPGSSCHCTE-----------------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 389 I~v~pg~~f~~~~-----------------~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
|.+++|..|.... .+.+|+|++. .+++|++++++.|++++++.++
T Consensus 313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999998775431 3689999987 4999999999999999887654
No 159
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=3.1e-23 Score=211.28 Aligned_cols=344 Identities=14% Similarity=0.130 Sum_probs=210.4
Q ss_pred CCeeeeeccccccChHHHHHHHhcCC-CccccccCCcccccccccCC-CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNP-DAAGFKRDGQSIFRELALFQ-DYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
...|+|+.++|++++. +.+++.... .... .+ .....|. ...-...+.+...+.+.+.++ .+.++|+
T Consensus 25 ~~~~~l~~~~n~~~~~-v~~a~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~e~~~~~~la~~~g----~~~~~i~ 92 (416)
T PRK00011 25 EEHIELIASENFVSPA-VMEAQGSVLTNKYA---EG----YPGKRYYGGCEYVDVVEQLAIDRAKELFG----AEYANVQ 92 (416)
T ss_pred hcCeeeecccCcCCHH-HHHHHhchhhcccc---cC----CCCccccccchHHHHHHHHHHHHHHHHhC----CCceeee
Confidence 3569999999996544 444443321 0000 00 0011121 111223333312223333333 4555676
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-----HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-----LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
+++| ++++..++.+++++||.|+++.|+|..+... +... |++++.++++. .++.+|++++++.+++.
T Consensus 93 ~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~i~~~----- 164 (416)
T PRK00011 93 PHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGK-LYNVVSYGVDE-ETGLIDYDEVEKLALEH----- 164 (416)
T ss_pred cCCc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccc-eeeEeecCcCc-ccCCcCHHHHHHHHHhc-----
Confidence 6665 6789999999999999999999999765321 1223 67888888763 34679999999998642
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-ccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|+++++++| ...+ +++|.++|+++|+++|+|++|... .+.+.. ... + . ...++++|
T Consensus 165 ~~k~v~~~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~-~~~--~----------~-~~di~~~S 225 (416)
T PRK00011 165 KPKLIIAGASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVH-PSP--V----------P-HADVVTTT 225 (416)
T ss_pred CCCEEEECCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCcc-CCC--C----------C-CCcEEEec
Confidence 6788888766554 4445 666889999999999999998521 121111 110 1 1 23477899
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcccccC-c--HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLV-S--SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~-s--~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
+||++ +|.|.||++++++.+.+.+......+.. + ...+.++..++.. ...+.+++.+++++++++++.+.|++
T Consensus 226 ~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~ 301 (416)
T PRK00011 226 THKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKE--ALEPEFKEYAQQVVKNAKALAEALAE 301 (416)
T ss_pred CCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99976 7889999999765565555544332211 1 1122221112111 11334577788889999999999999
Q ss_pred cCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC-CCC---CCCCCeEEEEee-----cCCHHH
Q 043923 347 AGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS-SCH---CTEPGWFRVCFA-----NMSEDT 416 (469)
Q Consensus 347 ~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~-~f~---~~~~~~iRi~~~-----~~~~e~ 416 (469)
.|+++.+ ...++++|+.+++.. .+..++ .+.|+++||.+..+. .+. +..+..+|++.. .+++++
T Consensus 302 ~g~~~~~~~~~~~~~~i~~~~~~-----~~~~~~-~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~d 375 (416)
T PRK00011 302 RGFRVVSGGTDNHLVLVDLRSKG-----LTGKEA-EAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAE 375 (416)
T ss_pred CCCeeeecCCCCeEEEEeCcccC-----CCHHHH-HHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHH
Confidence 8987754 122488899886321 012234 445567899997432 111 112456999641 247899
Q ss_pred HHHHHHHHHHHHHh
Q 043923 417 LKLSMQRLKAFVDS 430 (469)
Q Consensus 417 i~~~l~~L~~~l~~ 430 (469)
++.+++.|++++..
T Consensus 376 i~~l~~~l~~~~~~ 389 (416)
T PRK00011 376 MKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998774
No 160
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=8.2e-24 Score=212.73 Aligned_cols=295 Identities=17% Similarity=0.190 Sum_probs=202.4
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCC-CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTF-DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEI 160 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~-~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~ 160 (469)
.+..++++.++++++ . +.++|++|+|+++++..++.+++++||+|++..+.|..+.. .++.. |+++
T Consensus 44 ~~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLFN--------APSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQI-GVEI 114 (376)
T ss_pred HHHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHc-CcEE
Confidence 456788999999886 3 34589999999999999999999999999999999887643 23344 9999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+.++.+. ++.+|++++++++++ +++++++++|+||||.+++.++ |.++|+++|+++|+|++++ ++.
T Consensus 115 ~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~~~~---i~~l~~~~~~~livD~a~~---~g~ 180 (376)
T TIGR01977 115 TIVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILPIEE---IGELAQENGIFFILDAAQT---AGV 180 (376)
T ss_pred EEEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCCHHH---HHHHHHHcCCEEEEEhhhc---cCc
Confidence 9998763 456899999998864 7899999999999999999655 7888999999999999997 332
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH----h--------------cccc
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK----M--------------SSFG 302 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~----~--------------~~~~ 302 (469)
.+ ..+. ..+..+++.|++|+++.|. .+|.++..+......... . ...+
T Consensus 181 ~~-~~~~------------~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 246 (376)
T TIGR01977 181 IP-IDMT------------ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESG 246 (376)
T ss_pred cC-CCch------------hcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCC
Confidence 21 1111 1245677889999986442 467666544421110000 0 0012
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CceEEEEEecccccccCChhHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~ 377 (469)
+.+.+...++.++++... +.-.+..+++.....+++.+.|.+. ++++..+ ..+..+++.+++. +..
T Consensus 247 t~~~~~~~a~~~al~~~~--~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~ 317 (376)
T TIGR01977 247 TLNTPGIAGLNAGIKFIE--KIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-------DSE 317 (376)
T ss_pred CCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-------CHH
Confidence 233333333333332110 1113455667777788888888865 6766543 1245677777532 122
Q ss_pred HHHHHHHHhCCeEEeCCCCCCC--------CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHC--------TEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~--------~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
++...|.+++||.+.+|..+.. ...+.+|+++.. .++++++.++++|++
T Consensus 318 ~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 318 EVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 4566666556999999876642 245789999976 499999999999975
No 161
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=3.1e-23 Score=208.32 Aligned_cols=289 Identities=16% Similarity=0.183 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCEEEEccCCCcChHHHHhhhCCCEEEE
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA------EPGEAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~------~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~ 162 (469)
.++++.+|++++ ++++++++++|+++++..++.++. .+||.|++++++|..+...++.. |++++.
T Consensus 62 ~~~~~~la~~~g--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~-G~~~~~ 132 (373)
T TIGR03812 62 EEVVGSLGNLLH--------LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEML-GLELRY 132 (373)
T ss_pred HHHHHHHHHHhC--------CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHc-CCeEEE
Confidence 455566666654 567788999999999988876653 46799999999999988888877 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC--C
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS--S 240 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~--~ 240 (469)
++.+ .++.+|++++++++++ ++..+++..|+||||.+.+.++ |.++|+++|+++|+|++|+.+... .
T Consensus 133 v~~~--~~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~~~~---i~~l~~~~~~~livD~a~~~~~~~~~~ 201 (373)
T TIGR03812 133 APLD--EDYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDDIEE---LSKIALENGIYLHVDAAFGGFVIPFLK 201 (373)
T ss_pred EeeC--CCCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCCHHH---HHHHHHHcCCeEEEEcCchhHHHHHHh
Confidence 9986 3567899999999875 4545555568999999988555 788888999999999999754321 0
Q ss_pred --CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc----------ccCcHHH
Q 043923 241 --PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF----------GLVSSQT 308 (469)
Q Consensus 241 --~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~----------~~~s~~~ 308 (469)
..... ..+. ......+..|.+| |++++.++|+++..++.+.+.+.....+ ++.+...
T Consensus 202 ~~~~~~~-~d~~---------~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~ 270 (373)
T TIGR03812 202 KGYNPPP-FDFS---------LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGAS 270 (373)
T ss_pred cCCCCCC-cccc---------CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHH
Confidence 00000 0000 0122234457789 6678889987775455444443322222 1122334
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eecCCceEEEEEecccccccCChhHHHHHHHHHHHhC
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS-CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~-v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~ 387 (469)
..++...++... ...+++..+++.+.++++.+.|+++|+. +.++.. .++.+.++.. .++.+.|. ++
T Consensus 271 ~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~v~~~~~~~---------~~v~~~L~-~~ 337 (373)
T TIGR03812 271 AAATYAVIKYLG--REGYRKIVAECMENTRYLVEELKKIGFEPVIEPVL-NIVAFEVDDP---------EEVRKKLR-DR 337 (373)
T ss_pred HHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCc-eEEEEEeCCH---------HHHHHHHH-HC
Confidence 444444444321 3345677788889999999999998875 444444 5676776531 14555554 56
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 388 KLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 388 GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
||.+.++. .++++|+++.. .+++++++++++|++
T Consensus 338 gi~v~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 338 GWYVSVTR-----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 99998653 25689999976 389999999999975
No 162
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=5.8e-23 Score=206.15 Aligned_cols=293 Identities=17% Similarity=0.185 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE----PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
.++++.++++++ .+.+++++++|+++++..++.++.. ++|.|++.++.|..+...++.. |++++.+|
T Consensus 62 ~~~~~~la~~~g--------~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~-g~~~~~v~ 132 (371)
T PRK13520 62 EEAVEMLGELLH--------LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADML-GVELRRAP 132 (371)
T ss_pred HHHHHHHHHHhC--------CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHc-CceEEEec
Confidence 345555555553 4566889999999999999877654 5789999999999888888777 99999998
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+. ++.+|++.+++++++ +++.|+++.++||||.+.+ +++|.++|+++|+++++|++|+.+........
T Consensus 133 ~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~ 201 (371)
T PRK13520 133 LDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDP 201 (371)
T ss_pred CCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCC
Confidence 763 456899999999975 6777888889999999998 55588888999999999999986432110000
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc----------ccCcHHHHHHHHH
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF----------GLVSSQTQYLLSA 314 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~----------~~~s~~~q~~~~~ 314 (469)
...... ..+...+..|.+| |+++|.++|+++..++.+.+.+.....+ ++.+.....++.+
T Consensus 202 ~~~~~~---------~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~ 271 (371)
T PRK13520 202 PNFDFS---------LPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYA 271 (371)
T ss_pred CCcccc---------CCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHH
Confidence 001110 1123344457778 5568899999887666554443321111 1112233444444
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC
Q 043923 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS-CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP 393 (469)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~-v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p 393 (469)
++.... ...+++.+++..+.++++.+.|++.|++ +..+.. .++.++++. ..++...|. ++||.+.+
T Consensus 272 al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~v~~~~~~---------~~~v~~~L~-~~gi~v~~ 338 (371)
T PRK13520 272 VMKYLG--REGYRKVVERCMENTRWLAEELKERGFEPVIEPVL-NIVAFDDPN---------PDEVREKLR-ERGWRVSV 338 (371)
T ss_pred HHhhhc--HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCc-eEEEEecCC---------HHHHHHHHH-HCCceecc
Confidence 444321 2234667778888889999999988887 555554 466677652 124555555 56999986
Q ss_pred CCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 394 GSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 394 g~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
+. .++++|+++.. .++++++++++.|+++++
T Consensus 339 ~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 339 TR-----CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 53 24689999865 489999999999998765
No 163
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=8.7e-23 Score=207.15 Aligned_cols=298 Identities=14% Similarity=0.119 Sum_probs=201.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
+.+|++.+|++++ .+..++++++++|+..++..+.. +||.|+.....|......+... |.++..++.
T Consensus 92 ~~~le~~la~~~g----------~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~-g~~~~~~~~ 160 (406)
T PRK13393 92 HVLLEAELADLHG----------KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHS-RAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHc-CCeEEEeCC
Confidence 5778888888774 23445444555688888887655 7887777777777777777666 888777764
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
. |++.+++.++.. ..+++++|++++++||+|.+.+ +++|.++|+++|+++|+||+|+...++... ..
T Consensus 161 ~-------d~~~l~~~l~~~--~~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g 227 (406)
T PRK13393 161 N-------DPADLERKLSDL--DPHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GG 227 (406)
T ss_pred C-------CHHHHHHHHHhc--cCCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cc
Confidence 2 667777776532 1125788899999999999999 555888899999999999999843344221 12
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-cc---ccCcHHHHHHHHHHhcCchh
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-SF---GLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~ 321 (469)
+..... . ..+.+++++||||+||++| ||+++++ .+.+.+.... .+ ...+++.+.++.+.|+...
T Consensus 228 ~~~~~~-~------~~~~~i~~~tlsKa~g~~G---G~~~~~~-~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~- 295 (406)
T PRK13393 228 IAEREG-L------ADRLTIIEGTLAKAFGVMG---GYITGSA-ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLK- 295 (406)
T ss_pred hhhhcC-C------CCCCeEEEEeCchhhcccC---ceeeCCH-HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHh-
Confidence 221111 0 1234677899999999888 9998854 4545444432 21 1234555666666664321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-C
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-T 400 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~ 400 (469)
+. ...+.++.++++++.+.|++.|+++.++.+. ++.+.++.. ....++...|++++||.+.++..... .
T Consensus 296 --~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~ 365 (406)
T PRK13393 296 --AS-SAERERHQDRVARLRARLDKAGIPHLPNPSH-IVPVMVGDP------VLCKQISDELLDRYGIYVQPINYPTVPR 365 (406)
T ss_pred --hC-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-eEEEEeCCH------HHHHHHHHHHHHhCCEEEEeECCCCCCC
Confidence 11 1234566778889999999888877766664 555554321 12345677777667999998754332 2
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 401 EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 401 ~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+++|++++. .+++++++++++|++++++.
T Consensus 366 g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 366 GTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 34689999976 49999999999999998764
No 164
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=7.2e-23 Score=206.41 Aligned_cols=290 Identities=14% Similarity=0.181 Sum_probs=191.6
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~ 154 (469)
..+|+. .+..+|++++|++++ .+.+++++|+++|+..++.+++++||.|+++.|.|..+... +..
T Consensus 58 Y~r~~~-p~~~~Le~~iA~~~g----------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 126 (400)
T PRK06234 58 YSRLGN-PTSTEVENKLALLEG----------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTR 126 (400)
T ss_pred ccCCCC-ccHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhh
Confidence 344544 468999999999986 24678889999999999999999999999999999876543 344
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEecc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEI 232 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Dea 232 (469)
. |++++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++
T Consensus 127 ~-G~~v~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea 189 (400)
T PRK06234 127 Y-GVEVTFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNT 189 (400)
T ss_pred C-CeEEEEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECC
Confidence 5 9999888753 67889988865 7899999999999999998 55577788886 999999999
Q ss_pred ccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHh--cc-c-ccCcHH
Q 043923 233 YSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKM--SS-F-GLVSSQ 307 (469)
Q Consensus 233 y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~--~~-~-~~~s~~ 307 (469)
|+..++. . . .. .+..+++.|+||.++.+|.++ ||++++++ +.+.++.. .. . ..+++.
T Consensus 190 ~~~~~~~-~---~-l~------------~g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~l~p~ 251 (400)
T PRK06234 190 FCTPYIQ-R---P-LQ------------LGADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSVIGPF 251 (400)
T ss_pred CCchhcC-C---c-hh------------hCCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCCCCHH
Confidence 9864332 1 1 11 145688999999998889775 99998654 43333321 21 1 224555
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc-ee-cC---------------CceEEEEEecccccc
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-IS-CL-KS---------------NAGLFCWVDMRHLLR 369 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~-v~-~~---------------~~g~~~~v~~~~~~~ 369 (469)
..+.+..-|+. +..+.++..++...+.+.|+++. +. |. |. ..|-.+.+.+++..
T Consensus 252 ~a~l~~~~l~t-------l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~- 323 (400)
T PRK06234 252 EAFLIIRGMKT-------LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV- 323 (400)
T ss_pred HHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH-
Confidence 55555555443 23344455567777888887652 21 11 11 12335567775321
Q ss_pred cCChhHHHHHHHHHHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 370 SNTFEAEMELWKKIVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.....++.. |+-.++.+.-|..... -.++.+|+|++. |+.+.+++.|++++
T Consensus 324 ----~~~~~f~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al 395 (400)
T PRK06234 324 ----EEGKVVMNN-VKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQAL 395 (400)
T ss_pred ----HHHHHHHHh-CCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHH
Confidence 112233333 3333444433322210 114689999995 55667777777776
Q ss_pred Hh
Q 043923 429 DS 430 (469)
Q Consensus 429 ~~ 430 (469)
+.
T Consensus 396 ~~ 397 (400)
T PRK06234 396 DL 397 (400)
T ss_pred HH
Confidence 64
No 165
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.92 E-value=5.2e-23 Score=211.50 Aligned_cols=328 Identities=16% Similarity=0.194 Sum_probs=214.9
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCC--CcHHHHHHHHHH---HHhHcCCCCCCCCC
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYH--GLPAFKKALVEF---MSEIRGNKVTFDTS 112 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~--g~~~Lr~aia~~---l~~~~~~~~~~~~~ 112 (469)
+++.|+.+..+.. +..+.++.... .....|.+.. -...++++++++ +.+.+| ++++
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~--------------~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g----~~~~ 130 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRS--------------EFYTAYTPYQPEISQGTLQAIFEYQTMICELTG----MDVA 130 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhch--------------hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhC----CCcc
Confidence 5678888776654 33444444321 1223354411 124456555533 355555 5677
Q ss_pred cEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhh---hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKW---RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
++++++|+++++..++.++. .+||.|+++.|.|+.+...+.. ..|++++.+|.++ + .+|++++++++++
T Consensus 131 ~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~---- 203 (447)
T PRK00451 131 NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDD---- 203 (447)
T ss_pred eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCC----
Confidence 89999999999999988874 7899999999999988876553 1389999999874 3 6899999998864
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE--eccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLIS--DEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~--Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++++| ||||.+.+ +++|.++|+++|+++++ |....+. + . ... ..+.+++
T Consensus 204 --~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~-~---~--~~~------------~~~~D~~ 259 (447)
T PRK00451 204 --DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGL-L---K--PPG------------EYGADIV 259 (447)
T ss_pred --CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhcc-C---C--Ccc------------cCCCCEE
Confidence 7899999999 89999977 55688899999999988 4332211 1 0 000 1234444
Q ss_pred Ec---cCccccCCCcceEEEEEecCHHHHHH---------------------------HHHhcccccC--cHHHH-HHHH
Q 043923 267 VY---SLSKDLGLPGFRVGAIYSNDDMVVAA---------------------------ATKMSSFGLV--SSQTQ-YLLS 313 (469)
Q Consensus 267 i~---S~SK~~g~~GlRiG~li~~~~~~~~~---------------------------~~~~~~~~~~--s~~~q-~~~~ 313 (469)
+. +|||.+++.|+++||++++++.+... .+........ +...+ .++.
T Consensus 260 ~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa 339 (447)
T PRK00451 260 VGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAA 339 (447)
T ss_pred EECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHH
Confidence 44 78888888999999998865544331 0111111111 11222 2222
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEE--EecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCW--VDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~--v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
..+... ....+++.++++.++++++.+.|+++ |+++. .+++|.+ ++++. +..+++++|+++ ||.
T Consensus 340 ~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~~--------~~~~~~~~L~~~-gi~ 406 (447)
T PRK00451 340 IYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLPK--------PAEEVNEALLEK-GIL 406 (447)
T ss_pred HHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecCC--------CHHHHHHHHHhc-CCC
Confidence 222211 13446788899999999999999988 67765 3345543 45431 123677777654 665
Q ss_pred -EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 391 -ISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 391 -v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
..++..|++...+++|++++. .++++++++++.|++++
T Consensus 407 ~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 407 GGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 345665654445789999975 49999999999998764
No 166
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.92 E-value=6.5e-23 Score=207.79 Aligned_cols=275 Identities=16% Similarity=0.166 Sum_probs=185.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~~ 170 (469)
.+.+++++++++|+..++.... ...+.|+..+-.|++....+....| ..++.+|.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence 4689999999999999998652 1235677777777665322211101 12222222
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM--SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~--s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
.|++.+++.+.+ ++++|+++ |.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .+...
T Consensus 172 --~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~ 241 (403)
T PRK05093 172 --NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYMH 241 (403)
T ss_pred --CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhh
Confidence 167888887753 67776666 888887765 8999999999999999999999999986554432 11111
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-hc-ccccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-MS-SFGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
. . . .++ +.||||+++ +|+|+||++++++ +.+.+.. .. .....+++.|.++.+.|+... .
T Consensus 242 ~-~-~------~pd----i~s~sK~l~-~G~rig~vv~~~~-i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~-----~ 302 (403)
T PRK05093 242 Y-G-V------TPD----ILTSAKALG-GGFPIGAMLTTAE-IASHFKVGTHGSTYGGNPLACAVAEAVFDIIN-----T 302 (403)
T ss_pred c-C-C------CCC----EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-----h
Confidence 1 1 0 112 458999999 9999999999654 4444432 12 122367888888888664321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
....+.++++++++.+.|++++ +....+..|+++|+.++... .....+++..+++ +||.+.|+ +.
T Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~----~~~~~~~~~~l~~-~Gv~v~~~------g~ 371 (403)
T PRK05093 303 PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY----KGRARDFLNAAAE-EGVMVLVA------GP 371 (403)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc----hhHHHHHHHHHHH-CCeEEecC------CC
Confidence 2345677778888888888763 22234456799999986421 0234467777765 59999874 24
Q ss_pred CeEEEEeecC-CHHHHHHHHHHHHHHHHh
Q 043923 403 GWFRVCFANM-SEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 403 ~~iRi~~~~~-~~e~i~~~l~~L~~~l~~ 430 (469)
+++|++++.. +++++++++++|++++++
T Consensus 372 ~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 372 DVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 6899987764 999999999999999864
No 167
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=1.5e-22 Score=202.47 Aligned_cols=218 Identities=18% Similarity=0.188 Sum_probs=159.5
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---h
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---R 155 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~ 155 (469)
+.+|+.+ ...+|++++|++.+ .+++++++|+++|+..++.+++++||.|+++.|+|......+.. .
T Consensus 45 Y~R~~~p-~~~~le~~lA~l~g----------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNP-TRDLLQQALAELEG----------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 5667655 45899999999874 46799999999999999999999999999999999875544332 1
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
.|+++..++. .|++.+++++++ ++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|..
T Consensus 114 ~~~~v~~~d~-------~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~dl~---~I~~la~~~g~~vvvD~a~~~ 177 (382)
T TIGR02080 114 GCFRVLFVDQ-------GDEQALRAALAQ------KPKLVLIETPSNPLLRVVDIA---KICHLAKAVGAVVVVDNTFLS 177 (382)
T ss_pred cCeEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCcc
Confidence 1455554431 367888888865 789999999999999999855 578888899999999999975
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~ 312 (469)
..+. . + ..+ +..++++|+||.++ .++++.|++++.++.+.+.+...+.. ..++++..+.+
T Consensus 178 ~~~~-~---p-l~~------------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~ 240 (382)
T TIGR02080 178 PALQ-N---P-LAL------------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLT 240 (382)
T ss_pred cccC-C---c-hhh------------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHH
Confidence 4221 1 1 111 23478899999985 57899999988666665555444333 23566666555
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.+-++. +..+.++..++...+.+.|+.+
T Consensus 241 lr~l~t-------l~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 241 LRGLRT-------LVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred Hcccch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 443332 3444566677888888899876
No 168
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=2.6e-22 Score=201.83 Aligned_cols=332 Identities=13% Similarity=0.110 Sum_probs=209.9
Q ss_pred CCCCCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..|.. .+ .++.+.+++.+..+ .....+ .....+++.++++++.+..+
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~-------------~~~~~~-~~~~~~~~~~la~~l~~~~~------ 85 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLD-------------DIWHVS-NLFTNSLQEEVASLLAENSA------ 85 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hccccc-cccCCHHHHHHHHHHHhcCC------
Confidence 33456899877742 23 34556666555311 111111 22447899999999975422
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-CCC-CEEEEccCCCcChHHH-HhhhCCCEEE---EeeccCCCCcc--cCHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA-EPG-EAFLLPTPYYPGFDRD-LKWRTGVEIV---PIQCTSLNGFQ--ITETAIEEAY 182 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~-~~g-d~Vl~~~P~y~~~~~~-~~~~~g~~~~---~v~~~~~~~~~--~d~~~l~~~i 182 (469)
.+.+++++++++|+..++.... .+| +.|++.++.|++.... .... +.... ..|...+..+. .|++.+++.+
T Consensus 86 ~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 164 (377)
T PRK02936 86 GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSAT-GQEKIKEGFGPLLPGFTHVPFNDIKALKEVM 164 (377)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhcc-CCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence 3689999999999999998642 233 6799999988754322 2222 32111 01111000000 1678888877
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
.+ ++++|++..+++++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.. .+.... . ..
T Consensus 165 ~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~-~~~~~~-~--------~~ 228 (377)
T PRK02936 165 NE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL-FAYEQF-G--------LD 228 (377)
T ss_pred cC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhh-C--------CC
Confidence 53 78888888888999876 58899999999999999999999999875443332 111111 1 11
Q ss_pred CeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHH
Q 043923 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRK 339 (469)
Q Consensus 262 ~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~ 339 (469)
+.+ .++||+++ +|+|+||+++++ .+.+.+.... .....+++.|.++.++|+.... +...+++.++.++
T Consensus 229 ~di---~t~sK~l~-~G~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~~~~~ 298 (377)
T PRK02936 229 PDI---VTVAKGLG-NGIPVGAMIGKK-ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-----PSFLEEVQEKGEY 298 (377)
T ss_pred CcE---EEEccccc-CCCccEEEEEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHH
Confidence 222 37999999 999999999954 4544443221 1223678889988888865321 1233445555566
Q ss_pred HHHHHHhc--CCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCH
Q 043923 340 LVSGLEKA--GISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSE 414 (469)
Q Consensus 340 l~~~L~~~--g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~ 414 (469)
+.+.|++. ++... ....|+++|++++.. ...+.. .+.++||.+.|+. .+++|+++.. +++
T Consensus 299 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--------~~~~~~-~l~~~gv~v~~~g------~~~lRi~p~~~~~~ 363 (377)
T PRK02936 299 FLQKLQEELEHLECVKNIRGKGLMIGIECTEE--------VAPVIE-QLREEGLLVLSAG------PNVIRLLPPLVVTK 363 (377)
T ss_pred HHHHHHHHHhhCCcEEeEeecceEEEEEecch--------HHHHHH-HHHHCCeEEecCC------CCEEEEECCcccCH
Confidence 66666552 22221 123468999998742 223444 4567799998752 4689999743 599
Q ss_pred HHHHHHHHHHHHHH
Q 043923 415 DTLKLSMQRLKAFV 428 (469)
Q Consensus 415 e~i~~~l~~L~~~l 428 (469)
+++++++++|++++
T Consensus 364 ~~i~~~i~~l~~~~ 377 (377)
T PRK02936 364 EELDQAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998764
No 169
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.91 E-value=3.6e-22 Score=200.61 Aligned_cols=291 Identities=13% Similarity=0.158 Sum_probs=192.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh---
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR--- 155 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~--- 155 (469)
+.+|+.+. ..+|++.+|++++ ..+.+++ ++++.|+..++.+++++||.|+++.|.|......+...
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~G---------~~~al~~-~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~ 123 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLEG---------GEEALAF-GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK 123 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHhC---------CCcEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh
Confidence 45566553 5899999999986 2344444 55567999999999999999999999888765544322
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
.|+++..++. .|++++++++++ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++|+.
T Consensus 124 ~gi~~~~~~~-------~d~~~l~~~i~~------~tklV~lesp~NptG~v~dl---~~I~~la~~~g~~vivD~a~a~ 187 (386)
T PRK06767 124 FMITHSFCDM-------ETEADIENKIRP------NTKLIFVETPINPTMKLIDL---KQVIRVAKRNGLLVIVDNTFCS 187 (386)
T ss_pred cCeEEEEeCC-------CCHHHHHHhhCc------CceEEEEeCCCCCCceecCH---HHHHHHHHHcCCEEEEECCCcc
Confidence 2555544432 267888888764 78999999999999999985 5578888899999999999974
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcc-cc-cCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSS-FG-LVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~~ 312 (469)
..+. . + + ..+..+++.|+||.++.+|.++ ||+++++..+.+....... .+ .++++.++++
T Consensus 188 ~~~~-~---p---l----------~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~ 250 (386)
T PRK06767 188 PYLQ-R---P---L----------ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLL 250 (386)
T ss_pred cccC-C---c---h----------hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3221 1 1 1 1134577889999998889886 8999876655554333322 22 2455555544
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------CceEEEEEecccccccCChhHHHHHH
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS----------NAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~----------~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
...|+. +..+.++.+++.+.+.+.|+++ +++ +..| ..|-.+.+.+++. ..+...++
T Consensus 251 ~~~L~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-----~~~~~~f~ 318 (386)
T PRK06767 251 LRGLKT-------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-----KEETQAFI 318 (386)
T ss_pred HcCCCc-------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC-----HHHHHHHH
Confidence 444432 3445566788888899999987 665 3311 1233555666521 12233444
Q ss_pred HHHHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 381 KKIVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
..+ +..++.+.-|..... -.++.+|+|++. |+.+.+++-|.++++
T Consensus 319 ~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 319 NDL-HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred HhC-CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 443 556666665532211 014689999995 567777888887775
No 170
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=2.4e-22 Score=200.27 Aligned_cols=285 Identities=13% Similarity=0.170 Sum_probs=189.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC---------------EEEEccCCCcCh---
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGE---------------AFLLPTPYYPGF--- 148 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd---------------~Vl~~~P~y~~~--- 148 (469)
+.+++++++++++.+.+| .+++++++|+++|+.+++.+++++|| .|+++.|.|..|
T Consensus 42 ~~~~~~~~~~~~~a~~~g------~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~ 115 (363)
T TIGR01437 42 EIKELVNKTGEYIANLLG------VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAP 115 (363)
T ss_pred CHHHHHHHHHHHHHHhhC------CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCc
Confidence 357888888888877655 45789999999999999999999998 999999888766
Q ss_pred -HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE-EecCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q 043923 149 -DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL-VTNPSNPLGTTMSRNELNLLVNIITEKNIH 226 (469)
Q Consensus 149 -~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv-l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~ 226 (469)
...+... |++++.++.+ +.+|++++++++++ ++++++ +++|+||+|.+.+.++ |+++|++||++
T Consensus 116 ~~~~~~~~-g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~~~~---i~~~a~~~gi~ 181 (363)
T TIGR01437 116 VETMVRLG-GGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLSVED---AAQVAQEHNLP 181 (363)
T ss_pred hHHHHHhc-CCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCCHHH---HHHHHHHcCCe
Confidence 3445555 9999988763 35899999999976 777665 6788999999999655 89999999999
Q ss_pred EEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc------
Q 043923 227 LISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS------ 300 (469)
Q Consensus 227 iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~------ 300 (469)
+|+|++|+. +. .+...+ +..+++.|++|.+ +|++.|+++++++.+.. ......
T Consensus 182 vivD~a~~~---~~---~~~~~~------------g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~-~~~~~~~~~~~~ 240 (363)
T TIGR01437 182 LIVDAAAEE---DL---QKYYRL------------GADLVIYSGAKAI--EGPTSGLVLGKKKYIEW-VKLQSKGIGRAM 240 (363)
T ss_pred EEEECCCCC---ch---HHHHHc------------CCCEEEEeCCccc--CCCceEEEEEcHHHHHH-HHhccCCCccee
Confidence 999999971 11 111111 3456778999976 67789999985554433 222111
Q ss_pred -cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC--ceE-----EEEEecccccccC
Q 043923 301 -FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN--AGL-----FCWVDMRHLLRSN 371 (469)
Q Consensus 301 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~--~g~-----~~~v~~~~~~~~~ 371 (469)
.+..+..++.++...+.+. ..+..+.+.++++.+.+.|.++ |+++..+. .+. -+.++... .
T Consensus 241 ~~~~~~~~gl~aAl~~~~~~------~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~----~ 310 (363)
T TIGR01437 241 KVGKENILGLTAALEQYLST------GKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE----L 310 (363)
T ss_pred ccCHHHHHHHHHHHHHHHcc------CcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC----C
Confidence 1111222333333333221 1122333444567788999887 78766321 111 12222211 0
Q ss_pred ChhHHHHHHHHHHHhCC--eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 372 TFEAEMELWKKIVYDVK--LNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~G--I~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
. .+..++.+.| +++| |.+++ .|. ..+.+|+++...+++|++.++++|++++
T Consensus 311 g-~~~~~l~~~L-~~~~~~I~~r~--~~~--~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 311 G-MTAADVVQAL-RQGEPAIYTRG--YKA--NEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred C-CCHHHHHHHH-hcCCCCEEEee--eee--cCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 0 1123455554 5556 66654 232 4668999998779999999999998764
No 171
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=8e-22 Score=198.43 Aligned_cols=315 Identities=12% Similarity=0.130 Sum_probs=201.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
|+...++.+|++++|++++ ..+.+++++|.++.+ .++.+++++||.|+++++.|.++...+... +.+++
T Consensus 39 yg~~~~~~~LE~~lA~~~g---------~e~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~-~~~~~ 107 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLG---------TESAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLS-RANVR 107 (392)
T ss_pred cCChHHHHHHHHHHHHHhC---------CCcEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHc-CCeEE
Confidence 7767788999999999996 346788888877766 666778999999999999999988877655 78877
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHh--------cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQK--------RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~--------~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
.++.+ |++.++..++.... ..+++++|++.+|.||+|.+.+ ++++.++|++||+++|+||+|
T Consensus 108 ~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~ 177 (392)
T PLN03227 108 WFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESF 177 (392)
T ss_pred EeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcc
Confidence 77654 34444544433211 1236788899999999999999 556899999999999999999
Q ss_pred cccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc---cccc-CcHHHH
Q 043923 234 SGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS---SFGL-VSSQTQ 309 (469)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~---~~~~-~s~~~q 309 (469)
.-..++ .......+... . ....+..+++.|+||.+|.. .|++++++ .+.+.+.... .++. .+++.+
T Consensus 178 ~~g~~g-~~G~g~~~~~g-~----~p~~~~Div~~slsk~~g~~---gg~v~~~~-~~~~~~~~~~~~~~~~~~~~p~~~ 247 (392)
T PLN03227 178 SFGTLG-KSGRGSLEHAG-L----KPMVHAEIVTFSLENAFGSV---GGMTVGSE-EVVDHQRLSGSGYCFSASAPPFLA 247 (392)
T ss_pred cccccC-CCCCcHHHHcC-C----CCCCCceEEEeechhhhhcc---CcEEecCH-HHHHHHHHhCcCccccCCCCHHHH
Confidence 722222 21112222211 0 00124578889999987744 48888754 4443333221 2332 234455
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee----------cCCceEEEEEecccccccCChh---HH
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL----------KSNAGLFCWVDMRHLLRSNTFE---AE 376 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~----------~~~~g~~~~v~~~~~~~~~~~~---~~ 376 (469)
.++...+.... . .+..+++++++.+++.+.|++.+++.. ....|+++.+.+.+........ ..
T Consensus 248 ~aa~~al~~~~--~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 323 (392)
T PLN03227 248 KADATATAGEL--A--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLIL 323 (392)
T ss_pred HHHHHHHHHHh--c--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHH
Confidence 55544443211 1 234566778888888888876543311 1123456777775321111000 11
Q ss_pred HHHHHHHHHhCCeEEeCCCC-----CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 377 MELWKKIVYDVKLNISPGSS-----CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~-----f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.++++.++ ++||.+.+... +....+..+|++++. ++++++++++++|++++++..
T Consensus 324 ~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 324 DQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24555554 66999875221 112235679999977 699999999999999987653
No 172
>PRK06460 hypothetical protein; Provisional
Probab=99.91 E-value=3.4e-22 Score=199.89 Aligned_cols=212 Identities=19% Similarity=0.173 Sum_probs=147.8
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc----ChHHHHhhhCCCEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP----GFDRDLKWRTGVEIV 161 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~----~~~~~~~~~~g~~~~ 161 (469)
....+|++++|++++ . ...+++ +++++|+..++.+++++||.|+++.|.|. .+...++.. |+++.
T Consensus 45 p~~~~L~~~lA~l~g--------~-~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~-G~~v~ 113 (376)
T PRK06460 45 PTVLELTKKIVELEN--------A-EMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNW-GVNVD 113 (376)
T ss_pred ccHHHHHHHHHHHhC--------C-CcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhh-CcEEE
Confidence 367999999999986 2 234555 55568999999999999999999987654 344556666 99988
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+ +.+.+++.++ +++++|++++|+||||.+++.++ |.++|+++|+++|+||+|+.. +.
T Consensus 114 ~~~~~-------~~~~l~~~~~------~~tklV~l~sp~NPtG~v~d~~~---I~~la~~~g~~vivDea~~~~-~~-- 174 (376)
T PRK06460 114 ASNPG-------SDNIIEKAKS------KRYDVVFVENITNPLLRVVDITE---LSKVCKENGSILIVDATFSTP-IN-- 174 (376)
T ss_pred EECCC-------CHHHHHHhcC------CCceEEEEECCCCCCCcccCHHH---HHHHHHHcCCEEEEECCcCcc-cc--
Confidence 87754 1233333322 37899999999999999999765 788888999999999999742 11
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
...+ ..+.+++++|+||.|+ ..+.++||++++++ +.+.+.+....+..+. ....+..+++..
T Consensus 175 ----~~~l----------~~~~divv~S~sK~l~G~~~~~~G~~~~~~~-l~~~l~~~~~~~g~~~-~~~~a~~~l~~~- 237 (376)
T PRK06460 175 ----QKPL----------ELGADIVVHSASKFLAGHNDVIAGLAAGYGK-LLNVIDQMRRTLGTSL-DPHAAYLTLRGI- 237 (376)
T ss_pred ----CChh----------hcCCCEEEeecceeccCCCCceEEEEecCHH-HHHHHHHHHHhcCCCC-CHHHHHHHHhch-
Confidence 1111 1245688999999985 22478999998544 5554444433222221 112333444443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
++++.+.+++.++++.+.+.|+++
T Consensus 238 ---~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 238 ---KTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHcC
Confidence 346777888899999999999976
No 173
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.91 E-value=2.4e-22 Score=205.04 Aligned_cols=343 Identities=15% Similarity=0.111 Sum_probs=213.2
Q ss_pred CCCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCC-CCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQ-DYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||+..+. +.+ .++.+.+++++..+ ....|. +..+..+|+++|++++. .
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~lae~l~~~~~---------~ 103 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE-------------RGTSYGAPTEAEILLAKEIISRVP---------S 103 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCcCCCCCHHHHHHHHHHHHhCC---------c
Confidence 345689998763 323 45666666665321 112233 44567899999998763 2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhC--CCEEEEeeccC-------CCCcc---cCHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRT--GVEIVPIQCTS-------LNGFQ---ITET 176 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~--g~~~~~v~~~~-------~~~~~---~d~~ 176 (469)
.+.|++++|+++|+..+++... ...++|+...++|+++...+.... +......+..+ ...+. .|++
T Consensus 104 ~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 183 (423)
T TIGR00713 104 VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLE 183 (423)
T ss_pred ccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHH
Confidence 4689999999999999888642 245899999999998754332210 11111111000 00000 1788
Q ss_pred HHHHHHHHHHhcCCceeEEEEe-cCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVT-NPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~-~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
++++.+++. ..++++|++. .|+| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++. .+ ..+...
T Consensus 184 ~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~-~~--~~~~~~--- 253 (423)
T TIGR00713 184 ALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL-GG--AQEYFG--- 253 (423)
T ss_pred HHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc-ch--hHHHhC---
Confidence 898888632 2367777774 7788 798887 6899999999999999999999998763322 11 111111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh---c--ccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM---S--SFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~---~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
..+. +.+|||.+| +|+|+||++++++ +.+.+... . .....+++++.++.+.|+..+- .++.+..
T Consensus 254 -----~~pD---i~t~sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~ 322 (423)
T TIGR00713 254 -----VEPD---LTTLGKIIG-GGLPVGAFGGRRE-IMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTEL 322 (423)
T ss_pred -----CCcc---hhhhhhhhc-CCCceeeeeEHHH-HHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHH
Confidence 1122 238999999 9999999999544 44444321 1 1223677888887777653221 1235566
Q ss_pred HHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecc--cccc---c--CChhHHHHHHHHHHHhCCeEEeCCCCCCCCC
Q 043923 330 KKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMR--HLLR---S--NTFEAEMELWKKIVYDVKLNISPGSSCHCTE 401 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~--~~~~---~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~ 401 (469)
++..+..++.+.+.++++++.+.. ..+ .++.+.+. ...+ . .+......++..++ ++||.+.++ .|
T Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~~v~~~g-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-~~---- 395 (423)
T TIGR00713 323 DELAKRLAEGLSEVLEDTGIPHTVNRVG-SMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPS-QF---- 395 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEeec-cEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecC-Cc----
Confidence 666666777788888877765532 333 33333332 1100 0 01011224555666 579998754 22
Q ss_pred CCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 402 PGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 402 ~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+.+|++.. .+++++++++++|.+++++
T Consensus 396 -~~~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 396 -EACFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred -cceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 34788887 5999999999999999865
No 174
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=6.6e-22 Score=198.05 Aligned_cols=218 Identities=20% Similarity=0.216 Sum_probs=163.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---h
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---R 155 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~ 155 (469)
+.+|+.+ ....|++++|++++ .+.+++++|+++|+..++.+++++||+|++++|+|+.....+.. .
T Consensus 46 Y~R~~~p-t~~~L~~~lA~l~g----------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNP-TRDVVQRALAELEG----------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 5667765 46899999999985 24699999999999999999999999999999999864443322 2
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
.|+++..++ ..|++++++++++ ++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|..
T Consensus 115 ~gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~di~---~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 115 GCYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVDIA---KICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred CCeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCCc
Confidence 245665553 1478888888764 789999999999999999855 577778899999999999975
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhc-cc-ccCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMS-SF-GLVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~-~~-~~~s~~~q~~~ 312 (469)
... . .+ ..+ +..++++|++|.++ .++++.|++++.++.+.+.+.... .. ...+++.++.+
T Consensus 179 ~~~--~--~p-l~~------------gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~ 241 (386)
T PRK08045 179 PAL--Q--NP-LAL------------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLL 241 (386)
T ss_pred ccc--C--Cc-hhh------------CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 322 1 11 112 23478999999995 567889999886555544443322 22 23677888888
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.+.|+. +..+.++..++...+.+.|+++
T Consensus 242 ~rgl~t-------l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 242 LRGLRT-------LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred Hhhhcc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 887765 4566777788888899999887
No 175
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.91 E-value=3.6e-22 Score=201.93 Aligned_cols=269 Identities=17% Similarity=0.162 Sum_probs=178.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC---------CC-CEEEEccCCCcChH-HHHhhhCCCE------------EEEeeccC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE---------PG-EAFLLPTPYYPGFD-RDLKWRTGVE------------IVPIQCTS 167 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~---------~g-d~Vl~~~P~y~~~~-~~~~~~~g~~------------~~~v~~~~ 167 (469)
.+.+++++++++|+..++..... +| +.|+...-+|.+.. ..+... +.. +..+|.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLS-SEEEYKRGFGPMLPGIKKIPY-- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhc-CCcccccCCCCCCCCceEeCC--
Confidence 46899999999999999887631 34 67887777776643 332222 211 112221
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHH-HHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRN-ELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e-~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.|++.+++.+++ ++++|+++.|+||||.+++.+ .+++|.++|++||+++|+||+|.++...+..+ .
T Consensus 174 -----~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~- 240 (396)
T PRK04073 174 -----GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-A- 240 (396)
T ss_pred -----CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-H-
Confidence 167888887754 788888888899999998764 69999999999999999999999753332211 1
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHH
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
.+... ....+ .++||.+|.+|+|+||+++++ .+.+.+... ...+..+++.+.++.+.|+... +
T Consensus 241 ~~~~~--------~~pdi---~~~sK~lg~gg~~ig~~~~~~-~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~--~- 305 (396)
T PRK04073 241 CDWDN--------VTPDM---YILGKALGGGVFPISCVAANR-DILGVFTPGSHGSTFGGNPLACAVSIAALEVLE--E- 305 (396)
T ss_pred hhhcC--------CCCCE---EEecccccCCCCcceEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--h-
Confidence 11111 11222 368999998889999999954 444444322 1223367888888888775321 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKAG---ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE 401 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~g---~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~ 401 (469)
+...++.+++++++.+.|++++ +....+. |+|++++++. ...+++.+++ ++||.+.+. +
T Consensus 306 --~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~~~~~--------~~~~~~~~l~-~~Gv~~~~~------~ 367 (396)
T PRK04073 306 --EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGVELNE--------PARPYCEALK-EEGLLCKET------H 367 (396)
T ss_pred --cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEEEecc--------hHHHHHHHHH-HCCeEEecC------C
Confidence 1223444556777888887753 3333344 5788888762 1235666665 569999763 2
Q ss_pred CCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 402 PGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 402 ~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
++++|+++.. .+++++++++++|++++
T Consensus 368 ~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 368 ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 4689999754 49999999999999875
No 176
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=3.5e-24 Score=184.47 Aligned_cols=147 Identities=56% Similarity=1.037 Sum_probs=129.5
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCC-ccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDG-QSIFREL 79 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (469)
+++||+++++..+++++|||..|+.+..++|++..+|.|+|+|+++||.+..+.+..++.+.++.....+++ .+.+.+.
T Consensus 6 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~ 85 (153)
T PLN02994 6 NQLLSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI 85 (153)
T ss_pred hhhhhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999998865443333322 2223344
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG 147 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~ 147 (469)
..|++..|.++||+++|+|++++++..+.+++++|++|+|+++++..++.+|+++||.|++++|+|+.
T Consensus 86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 66999999999999999999999886566889999999999999999999999999999999999973
No 177
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.91 E-value=8.2e-22 Score=198.07 Aligned_cols=210 Identities=17% Similarity=0.220 Sum_probs=152.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~ 162 (469)
-..+|++.+|++++ .+++++++|+++|+..++.+++++||.|+++.+.|.+... .+... |++++.
T Consensus 62 ~~~~le~~la~l~g----------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~-G~~v~~ 130 (390)
T PRK08133 62 TVTMFQERLAALEG----------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARF-GIETTF 130 (390)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHc-CcEEEE
Confidence 36889999999875 4568999999999999999999999999999999977554 34445 999998
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+..
T Consensus 131 vd~~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~-- 192 (390)
T PRK08133 131 VDLT-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ-- 192 (390)
T ss_pred ECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 8763 67888888764 8899999999999999987 5568888999999999999987432211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcccc-cCcHHHHHHHHHHhcCch
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSSFG-LVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~ 320 (469)
+ ..+ +..+++.|+||.++.+|.++ |+++++++.+.+........+ .+++..++++ ++..+
T Consensus 193 --p-l~~------------g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~---l~gl~ 254 (390)
T PRK08133 193 --P-LKL------------GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVF---LKGLE 254 (390)
T ss_pred --c-hhh------------CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHH---Hcccc
Confidence 1 111 34578899999998889998 555665544433333333332 2344443333 33222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.+..+.++..++...+.+.|+++
T Consensus 255 ----tl~~R~~~~~~~a~~la~~L~~~ 277 (390)
T PRK08133 255 ----TLSLRMEAHSANALALAEWLEAH 277 (390)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhC
Confidence 24555666667888899999877
No 178
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.91 E-value=1.6e-21 Score=196.31 Aligned_cols=217 Identities=15% Similarity=0.253 Sum_probs=153.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
..+|+.+ ...+|++++|++++ . +..+++++++.++..++.+++++||.|+++.|.|..+...+ ..
T Consensus 59 y~r~~~p-~~~~Le~~lA~l~G--------~--~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 127 (398)
T PRK07504 59 YSRYSNP-TVDMFEKRMCALEG--------A--EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPR 127 (398)
T ss_pred eecCCCc-hHHHHHHHHHHHhC--------C--CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhh
Confidence 4557654 46899999999985 2 23345677788888888888899999999999999765433 34
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++. +|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+
T Consensus 128 ~-G~~v~~vd~-------~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 128 Y-GIESTLVDG-------LDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred c-CeEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 888888751 588999988865 8999999999999999998 4557888889999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEE-EEEecCHHHHHHHHH-hcccc-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG-AIYSNDDMVVAAATK-MSSFG-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG-~li~~~~~~~~~~~~-~~~~~-~~s~~~q~~ 311 (469)
...+. ....+ +..+++.|+||.++.+|.++| +++++++.+.+.+.. ....+ .++++..++
T Consensus 191 ~~~~~-----~~~~~------------gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~ 253 (398)
T PRK07504 191 TPLFQ-----KPLEL------------GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWT 253 (398)
T ss_pred ccccC-----Cchhh------------CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 54331 11112 456788999999988999996 555655545433332 22222 244444444
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+-|+. +..+.++..++...+.+.|+++
T Consensus 254 ~l~~L~t-------l~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 254 LLKGLET-------LPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred HHhccch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 4444433 3445555567777888888876
No 179
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.90 E-value=1.4e-21 Score=195.53 Aligned_cols=217 Identities=18% Similarity=0.238 Sum_probs=159.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhhh
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWR 155 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~ 155 (469)
.+|+. +...+|++.+|++++ .+..++++++++|+..++.+++++||.|+++.+.|...... +...
T Consensus 35 ~r~~~-p~~~~le~~la~l~g----------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~ 103 (369)
T cd00614 35 SRIGN-PTVDALEKKLAALEG----------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKL 103 (369)
T ss_pred ECCCC-hhHHHHHHHHHHHHC----------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhc
Confidence 34443 356899999999875 34567778889999999999999999999999999886543 3344
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|+++..++.+ |++++++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 104 -g~~~~~v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~ 166 (369)
T cd00614 104 -GIEVTFVDPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFAT 166 (369)
T ss_pred -CeEEEEeCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 8888888753 57888888754 7899999999999999998 55688889999999999999975
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhcc-c-ccCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSS-F-GLVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~-~-~~~s~~~q~~~ 312 (469)
.++. ... ..+..+++.|+||.+|.+| ++.|+++++++.+.+.+..... + +.++++..+++
T Consensus 167 ~~~~-----~~~------------~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~ 229 (369)
T cd00614 167 PYLQ-----RPL------------ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLL 229 (369)
T ss_pred hhcC-----Chh------------hhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 4321 111 1245688999999997665 8899999976345444443322 2 23566665555
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
...++. +..+.++..++...+.+.|++++
T Consensus 230 l~~l~t-------l~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 230 LRGLKT-------LPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred HcCCCC-------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 555533 34456667778888999998874
No 180
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=2.4e-21 Score=190.22 Aligned_cols=302 Identities=16% Similarity=0.141 Sum_probs=211.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
++...-+.+|++.+|+|++ .+..++.+++-.|...++.+|++++|.|+...-.|-+....++.. +++++
T Consensus 80 ~G~~~~h~~LE~~lA~f~g----------~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls-~a~~~ 148 (388)
T COG0156 80 SGTSDLHVELEEELADFLG----------AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLS-RAEVR 148 (388)
T ss_pred cCCcHHHHHHHHHHHHHhC----------CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhC-CCcEE
Confidence 4444557899999999996 344444455555777788999999999999999999999999877 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.+..+ |++.|++.+++....+.+.++|+...--...|.+.| +.+|++++++|++++++||+|+-.+++..
T Consensus 149 ~f~Hn-------D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~ 218 (388)
T COG0156 149 RFKHN-------DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPN 218 (388)
T ss_pred EecCC-------CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCC
Confidence 88853 789999999874322223555566555678999988 55588888899999999999997777644
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-hccccc---CcHHHHHHHHHHhc
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-MSSFGL---VSSQTQYLLSALLS 317 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~~~~~~---~s~~~q~~~~~~l~ 317 (469)
. ..+.+... + ...+.+|+++||||+||..| ||+.++ ..+.+.+.+ .+++.. .++....++.+.++
T Consensus 219 G-rG~~e~~g-~-----~~~~vdi~~gTlsKAlGs~G---g~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~ 287 (388)
T COG0156 219 G-RGLAEHFG-L-----EPEEVDIIVGTLGKALGSSG---GYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALR 287 (388)
T ss_pred C-ccHHHHhC-C-----CCccceEEEEEchhhhcccC---ceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHH
Confidence 3 23333321 0 12356899999999999888 999985 445555444 344432 23333333333433
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC 397 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f 397 (469)
.. +.....+++++++...+.+.+...++.+.+..+ .++.+-+.+. ....++...++++ ||.+.+....
T Consensus 288 ~l----~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s-~I~pv~~gd~------~~a~~~s~~l~~~-Gi~v~~i~~P 355 (388)
T COG0156 288 IL----EEGPERRERLQELAAFFRSLLKALGLVLLPSES-PIIPVILGDE------ERALEASRALLEE-GIYVSAIRPP 355 (388)
T ss_pred HH----HhCHHHHHHHHHHHHHHHHHHHhcCCccCCCCC-CeeeeEeCCH------HHHHHHHHHHHHC-CeeEeeecCC
Confidence 21 123556777888888888777777887755555 5665666532 2244566777766 9999877655
Q ss_pred CC-CCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 398 HC-TEPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 398 ~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
.. .+...+|++++. +++++|+.+++.|.++
T Consensus 356 TVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 356 TVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 43 234689999977 6999999999999875
No 181
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=6.1e-22 Score=200.91 Aligned_cols=294 Identities=15% Similarity=0.214 Sum_probs=198.2
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCCcChHHHH---hhhCCCE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGEAFLLPTPYYPGFDRDL---KWRTGVE 159 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~---~~~~g~~ 159 (469)
...++|+.+|++++ .++++|++++|+++++..++.++. ++||.|+++.+.|+.+...+ +.. |++
T Consensus 50 ~~~~~r~~ia~~~g--------~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~-g~~ 120 (404)
T PRK14012 50 AVDIARNQIADLIG--------ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLERE-GFE 120 (404)
T ss_pred HHHHHHHHHHHHcC--------cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhC-CCE
Confidence 35677888888875 567889999999999999887763 78999999999998775443 334 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.++.+. ++.+|++.+++++++ ++++|++++++||||.+++. ++|.++|+++|+++|+|++++ ++
T Consensus 121 ~~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~---~~I~~la~~~g~~vivD~a~~---~g 186 (404)
T PRK14012 121 VTYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQDI---AAIGEICRERGIIFHVDAAQS---VG 186 (404)
T ss_pred EEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhhH---HHHHHHHHHcCCEEEEEcchh---cC
Confidence 99998873 457899999999865 78999999999999999985 558888999999999999997 33
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--------ccccCcHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--------SFGLVSSQTQYL 311 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--------~~~~~s~~~q~~ 311 (469)
..+ ..+.. .+..+++.|++|.+| |+ ++|+++++++.......... ..++.+......
T Consensus 187 ~~~-~~~~~------------~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~ 251 (404)
T PRK14012 187 KVP-IDLSK------------LKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVG 251 (404)
T ss_pred Ccc-cCccc------------CCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHH
Confidence 221 12111 134466679999887 54 69999886543221111000 011222222222
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC-----CceEEEEEecccccccCChhHHHHHHHHHHH
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS-----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~-----~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~ 385 (469)
+.+++... +.......++.++.++++.+.|+++ ++.+.+. ...+++|+.+... .++...+
T Consensus 252 l~~al~~~---~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l-- 317 (404)
T PRK14012 252 MGEAARIA---KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG---------ESLIMAL-- 317 (404)
T ss_pred HHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH---------HHHHHhC--
Confidence 32333211 2223445566677777788888765 4444321 2234566655321 1233333
Q ss_pred hCCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 386 DVKLNISPGSSCHCT-----------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~-----------------~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++.|..|..|.+. ..+.+|++++. .++++++++++.|+++++..+.
T Consensus 318 -~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 318 -KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred -CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 37888887666432 13689999987 4999999999999999887654
No 182
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=2.1e-21 Score=193.92 Aligned_cols=217 Identities=16% Similarity=0.167 Sum_probs=162.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
+.+|+.+ ....|++++|++.+ .+++++++|+++|+..++.+++++||.|+++.|+|......+ ..
T Consensus 47 Y~R~~np-t~~~Le~~lA~leg----------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~ 115 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELES----------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK 115 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc
Confidence 5566655 46999999999985 589999999999999999999999999999999998644332 22
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++. .|++++++++++ ++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|.
T Consensus 116 ~-gi~v~~vd~-------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 116 G-DFKVQFVDQ-------SDAAALDAALAK------KPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred C-CeEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcc
Confidence 3 677777752 377888888764 889999999999999999955 57888889999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC-CcceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~ 311 (469)
...+.. + ..+ +..+++.|++|.++- .++..|++++.++.+.+.+...+.. + .+++...+.
T Consensus 179 ~~~~~~-p----l~~------------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l 241 (388)
T PRK08861 179 TPVLQK-P----LEL------------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYM 241 (388)
T ss_pred ccccCC-C----ccc------------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHH
Confidence 543221 1 111 345888999999964 4578899988665555544433322 2 356777666
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+-|+. +.-+.++..++...+.+.|+.+
T Consensus 242 ~~rgl~T-------l~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 242 TLRGIRT-------LGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 6666655 3445566677778888889877
No 183
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=2.8e-21 Score=194.14 Aligned_cols=328 Identities=13% Similarity=0.120 Sum_probs=213.3
Q ss_pred CCCCCeeeeeccc--cccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 35 QNPTGIIQMGLAE--NQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 35 ~~~~~~i~L~~~~--n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.....+||+..+- ..++ .+.+.+++.+.. .....++. ....++++++|+.+.. .+
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~-------------~~~~~~~~-~~~~~~~~~la~~l~~--------~~ 83 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQA-------------GLIWHSPN-LYLNSLQEEVAQKLIG--------DK 83 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHH-------------HhcCcccC-ccCCHHHHHHHHHHhc--------Cc
Confidence 3445689987652 2233 244666655531 11122222 2346788999988751 23
Q ss_pred C-cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChH-HHHhhhCCCEEE---------EeeccCCCCcccCHHHH
Q 043923 112 S-KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFD-RDLKWRTGVEIV---------PIQCTSLNGFQITETAI 178 (469)
Q Consensus 112 ~-~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~-~~~~~~~g~~~~---------~v~~~~~~~~~~d~~~l 178 (469)
+ .+++++++++|+..++.... .+++.|++.+..|++.. ..+... |.+.. .++.. .+ .|++.+
T Consensus 84 ~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~-~dl~~l 158 (375)
T PRK04260 84 DYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSAT-GQDKIKDGFGDGVPHFSYA---IF-NDLNSV 158 (375)
T ss_pred CCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhcc-CCcccCCCCCCCCCCeEEe---CC-CCHHHH
Confidence 3 46889999999998887752 34578888888877633 333222 22111 11110 11 378888
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccccc
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~ 257 (469)
++.+.+ ++.+|++..++|++|... +.+.++++.++|+++|+++|+||+|.++...+.. .+. ....
T Consensus 159 ~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~-~~~-~~~~------ 224 (375)
T PRK04260 159 KALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKL-YAF-EHYG------ 224 (375)
T ss_pred HHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhh-HhhC------
Confidence 887643 678888888899999864 5678999999999999999999999874332221 111 1111
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
..+. +.||||+++ +|+|+||+++++. +.+.+... ...+..+++.+.++.++|..... .+++++.++..+.
T Consensus 225 --~~pd---i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~ 296 (375)
T PRK04260 225 --IEPD---IFTLAKGLA-NGVPVGAMLAKSS-LGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNY 296 (375)
T ss_pred --CCCC---EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 1122 238999998 8999999999654 44443321 12233578888888888866543 4556777777777
Q ss_pred HHHHHHHHHHhcC-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CC
Q 043923 336 RHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 413 (469)
Q Consensus 336 ~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~ 413 (469)
.++.+.+.+.+++ +.... ..|+++|++++.. ..++..++. ++||.+.|+ +.+.+|+++.. ++
T Consensus 297 ~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l~-~~Gi~v~~~------~~~~lR~~~~~~~t 360 (375)
T PRK04260 297 LQEQLQKALQDKETVTTVR-GLGYMIGIETTAD--------LSQLVEAAR-DKGLIVLTA------GTNVIRLLPPLTLT 360 (375)
T ss_pred HHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc--------HHHHHHHHH-hCCCEEecC------CCCEEEEcCCCccC
Confidence 7788887777664 22232 3679999998421 224555554 679999875 24679999954 69
Q ss_pred HHHHHHHHHHHHHH
Q 043923 414 EDTLKLSMQRLKAF 427 (469)
Q Consensus 414 ~e~i~~~l~~L~~~ 427 (469)
++++++++++|+++
T Consensus 361 ~~~i~~~l~~l~~~ 374 (375)
T PRK04260 361 KEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 184
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=1.1e-21 Score=198.74 Aligned_cols=296 Identities=15% Similarity=0.192 Sum_probs=202.0
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCCcChHHHH---hhhCCCE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGEAFLLPTPYYPGFDRDL---KWRTGVE 159 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~---~~~~g~~ 159 (469)
...++|+.++++++ +++++|++++|+++++..++.++. ++||.|++..+.|..+...+ +.. |++
T Consensus 48 ~~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~-g~~ 118 (402)
T TIGR02006 48 AVENARNQVAELIG--------ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLERE-GFE 118 (402)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhc-CCE
Confidence 45677888888875 578899999999999999887753 68999999999998765543 344 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.++.+. ++.+|++.+++++++ +++++++++|+||||.+.+.+ +|.++|+++|+++++|++++ ++
T Consensus 119 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~~~---~I~~l~~~~g~~livD~a~a---~g 184 (402)
T TIGR02006 119 VTYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQDIA---AIGEICRERKVFFHVDAAQS---VG 184 (402)
T ss_pred EEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceecccHH---HHHHHHHHcCCEEEEEcchh---cC
Confidence 99999873 456899999988864 788999999999999999854 58888899999999999997 33
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--------cccccCcHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--------SSFGLVSSQTQYL 311 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--------~~~~~~s~~~q~~ 311 (469)
..+ ..+. ..+..+++.|.+|.+|.+| +|++++.++......... ...++.+.....+
T Consensus 185 ~~~-~~~~------------~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~a 249 (402)
T TIGR02006 185 KIP-INVN------------ELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVG 249 (402)
T ss_pred Ccc-cCcc------------ccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHH
Confidence 221 1211 1245577789999887445 888877544322110000 0113344444444
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC---ceEEEEEecccccccCChhHHHHHHHHHHHhC
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~ 387 (469)
+...++. +...++...+++++.++++.+.|+++ ++.+..+. ....+.+.++. .. ..++... + .
T Consensus 250 l~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~-~~------~~~~~~~-l--~ 316 (402)
T TIGR02006 250 MGEAFRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY-VE------GESLIMA-L--K 316 (402)
T ss_pred HHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC-cC------HHHHHHh-c--C
Confidence 4444432 23346667778888889999998876 55554221 10011122221 11 1123322 2 4
Q ss_pred CeEEeCCCCCCCC-----------------CCCeEEEEeecC-CHHHHHHHHHHHHHHHHhhcc
Q 043923 388 KLNISPGSSCHCT-----------------EPGWFRVCFANM-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 388 GI~v~pg~~f~~~-----------------~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|.++.|..+... ..+.+|+|++.. +++|++++++.|+++++..+.
T Consensus 317 ~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 317 DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999988776531 137899999874 999999999999999887655
No 185
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=4.8e-21 Score=191.05 Aligned_cols=282 Identities=16% Similarity=0.162 Sum_probs=186.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
+.+|+.+ ...+|++++|+++. .+. ++++++++|+..++.+++++||+|+++.|.|.++...+ ..
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~~----------~~~-v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELEG----------AEA-LVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHcC----------CCE-EEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 5667754 67999999999861 344 45555567999999999999999999999998886644 33
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++.+.. .+ .+. +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 113 ~-G~~v~~v~~~~~------~~----~~~------~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~ 172 (366)
T PRK07582 113 L-GVTVREAPTAGM------AE----AAL------AGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTA 172 (366)
T ss_pred C-eEEEEEECCCCh------HH----Hhc------cCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCC
Confidence 4 999999886521 11 111 27899999999999998876 5668999999999999999996
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~ 311 (469)
.. +... + .++ +..++++|+||.+ |.+|+|+||++++++.+.+.+...+.. ..++++..+.
T Consensus 173 ~~-~~~~---p-~~~------------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l 235 (366)
T PRK07582 173 TP-LGQR---P-LEL------------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWL 235 (366)
T ss_pred Cc-cccC---c-hhc------------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 32 1111 1 112 2347889999998 456899999998666665555443332 2356666666
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ee----c--C----------CceEEEEEecccccccCCh
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CL----K--S----------NAGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~----~--~----------~~g~~~~v~~~~~~~~~~~ 373 (469)
+.+.++.. ..+.++..++...+.+.|+++ .+. |. + | ..|-.+.+.+++.
T Consensus 236 ~~r~l~tl-------~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~------ 302 (366)
T PRK07582 236 AHRSLGTL-------GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADA------ 302 (366)
T ss_pred HHhccccH-------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCH------
Confidence 66666542 344456667888888889877 332 22 1 1 0233555666421
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCC--------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHC--------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~--------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+.+.+.+...++... +..+|. ..++.||+|++. |+.+.+++.|+++++.
T Consensus 303 ----~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 303 ----AAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred ----HHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 223445555565443 111221 124689999996 4456667777776653
No 186
>PRK07505 hypothetical protein; Provisional
Probab=99.90 E-value=1.1e-20 Score=191.65 Aligned_cols=293 Identities=15% Similarity=0.141 Sum_probs=173.3
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCC-EEEEccCCCcChH---HHHhhhCCCE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGE-AFLLPTPYYPGFD---RDLKWRTGVE 159 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd-~Vl~~~P~y~~~~---~~~~~~~g~~ 159 (469)
..+|++.++++++ . +.++.+ ++++|...++..+. .+|+ .|++.+..|++-. ...... +.+
T Consensus 93 ~~~l~~~la~~~~--------~--~~~~~~-sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~-~~~ 160 (402)
T PRK07505 93 LKDLEEALSELFG--------A--SVLTFT-SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICAD-ETE 160 (402)
T ss_pred HHHHHHHHHHHhC--------C--CEEEEC-ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhc-CCe
Confidence 4666777776653 2 444455 45567776665432 2232 3666665554321 112222 567
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.+|.+ |++++++++++ +++++++++|+||||.+++ +++|.++|++|++++|+||+|+...|+
T Consensus 161 v~~~~~~-------d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g 224 (402)
T PRK07505 161 VETIDHN-------DLDALEDICKT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYG 224 (402)
T ss_pred EEEeCCC-------CHHHHHHHHhc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcC
Confidence 7777642 78888888764 5678999999999999999 455788899999999999999643343
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc----cCcHHHHHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG----LVSSQTQYLLSAL 315 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~ 315 (469)
............. ..++++++++|+||+||.+| ||++++++.+.+.+......+ ++++++..++.+.
T Consensus 225 ~~g~~~~~~~~~~------~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~ 295 (402)
T PRK07505 225 KNGEGYVRSELDY------RLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILAS 295 (402)
T ss_pred CCCCchHHHHcCC------CCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHH
Confidence 2211111111110 02477899999999999776 888765666666555433222 2344555555555
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
+.-.. .+++.+.++.++++.+.+...+... + ...+.++.++.++.. ....++.+.|+ ++||.++++.
T Consensus 296 l~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~---~-~g~~~~i~~~~~~~~------~~~~~~~~~l~-~~Gi~v~~~~ 362 (402)
T PRK07505 296 AEIHL--SEELDQLQQKLQNNIALFDSLIPTE---Q-SGSFLPIRLIYIGDE------DTAIKAAKQLL-DRGFYTSPVF 362 (402)
T ss_pred HHHHh--ccCcHHHHHHHHHHHHHHHHHHHhc---C-CCCCCCEEEEEeCCH------HHHHHHHHHHH-HCCCeEeeec
Confidence 54100 1123344455555544443322111 1 111212233333211 12335666666 6699999884
Q ss_pred CCCCC-CCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 396 SCHCT-EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 396 ~f~~~-~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+... ++.++|++++. ++++++++++++|++++++
T Consensus 363 ~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 363 FPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 43221 34689999986 4999999999999998754
No 187
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=4.2e-21 Score=192.93 Aligned_cols=293 Identities=14% Similarity=0.096 Sum_probs=190.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~ 154 (469)
+.+|+.+ ...+|++++|++++ .+++++++|+++|+..++.+++++||.|+++.|+|..+.. .+..
T Consensus 59 Y~r~~~p-t~~~Le~~lA~l~g----------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 127 (394)
T PRK07050 59 YGLHATP-TSLALAQRLAEIEG----------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD 127 (394)
T ss_pred cCCCCCH-HHHHHHHHHHHHhC----------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh
Confidence 4556544 46888888888774 5689999999999999999999999999999999998764 3444
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++.. +.+.+++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|.
T Consensus 128 ~-Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 128 F-GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred c-CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCcc
Confidence 5 9999887632 34667777654 8999999999999975 5568889999999999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~ 311 (469)
...+- . .+ ..+..+++.|+||.++ ..+++.|++++.++.+.+.++..+.. + ..++...+.
T Consensus 191 ~~~~~-----~--~l----------~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l 253 (394)
T PRK07050 191 AGLAF-----K--PF----------EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSL 253 (394)
T ss_pred ccccc-----C--HH----------HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 42211 1 11 2245688999999996 34567899988666665555443332 2 355555554
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CceEEEEEecccccccCCh
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS----------------NAGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~----------------~~g~~~~v~~~~~~~~~~~ 373 (469)
+.+.+.+ +..+.++..++...+.+.|+++ ++. +..| ..|-.+.+.+..... .
T Consensus 254 ~lr~l~t-------l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~---~ 323 (394)
T PRK07050 254 VLRGLPS-------LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYS---P 323 (394)
T ss_pred HHcCCCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCC---H
Confidence 4444443 2334555556666788888876 332 2211 122234455542111 1
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCC---------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHC---------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~---------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
.+..+++.. ++..++.+.-|..... ..++.||||++. |+.+.+++.|.++++.
T Consensus 324 ~~~~~~~~~-l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 324 AQVDAFVEA-LELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHHHc-CCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHH
Confidence 222233333 3444554443332210 113689999995 5566677777776653
No 188
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=5.5e-21 Score=192.48 Aligned_cols=217 Identities=16% Similarity=0.172 Sum_probs=156.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh----HHHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF----DRDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~----~~~~~~ 154 (469)
..+|+.+ ...+|++.+|++.+ ..++++ ++++++|+.+++.+++++||.|+++.|.|... ...+..
T Consensus 54 y~R~~~p-~~~~Le~~lA~l~g---------~~~~v~-~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~ 122 (405)
T PRK08776 54 YTRSGNP-TRDLLGEALAELEG---------GAGGVI-TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKK 122 (405)
T ss_pred ccCCCCh-HHHHHHHHHHHHhC---------CCceEE-EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHh
Confidence 4455544 34788888888775 234554 45557999999999999999999999999873 333444
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|.
T Consensus 123 ~-g~~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a 185 (405)
T PRK08776 123 G-HFALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFL 185 (405)
T ss_pred c-CcEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCc
Confidence 4 888888764 267888888754 7899999999999999976 6668889999999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC-cceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~ 311 (469)
.... ..++ .+ +..+++.|.+|.++.+ ++..|+++++++.+.+.+...... ...+++.+++
T Consensus 186 ~~~~----~~pl-~~------------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l 248 (405)
T PRK08776 186 SPAL----QKPL-EF------------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFL 248 (405)
T ss_pred cccc----CCcc-cc------------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 4211 1111 12 3347889999999745 578899988766665544332221 2356666666
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+...++ +++.+.++..++...+.+.|+++
T Consensus 249 ~~~gl~-------tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 249 TLRGLR-------TLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHhhhC-------cHHHHHHHHHHHHHHHHHHHHcC
Confidence 554433 35667778888888999999876
No 189
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=3.7e-21 Score=193.43 Aligned_cols=214 Identities=12% Similarity=0.172 Sum_probs=153.1
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRT 156 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~ 156 (469)
+|+.+ ...+|++.+|++++ .+..++++++++|+..++.+++++||.|+++.|+|...... +...
T Consensus 60 r~~~p-~~~~le~~lA~l~g----------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~- 127 (398)
T PRK08249 60 RNTNP-TVQAFEEKVRILEG----------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRM- 127 (398)
T ss_pred CCCCh-HHHHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhC-
Confidence 44443 46899999999985 34567777778999999999999999999999999875433 3344
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|+++..++. .|++.+++++++ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++|+..
T Consensus 128 Gi~v~~vd~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~dl---~~I~~la~~~gi~livD~t~a~~ 191 (398)
T PRK08249 128 GVDVTLCET-------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVDI---ERLAAAAKKVGALVVVDNTFATP 191 (398)
T ss_pred CeEEEEcCC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCCH---HHHHHHHHHcCCEEEEECCcCcc
Confidence 888877653 478899988865 78999999999999999994 45888899999999999999854
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhccc-c-cCcHHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSSF-G-LVSSQTQYLLS 313 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~~~ 313 (469)
+.. . ++ .. +..++++|+||.+|.+|.++ |++++ ++.+.+.+...+.. + ..++..++++.
T Consensus 192 ~~~-~---~l-~~------------~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l 253 (398)
T PRK08249 192 INQ-N---PL-AL------------GADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLIL 253 (398)
T ss_pred ccC-C---ch-hh------------CCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 321 1 11 11 23477899999998677776 55565 44454444433322 2 34555555544
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+-++. +..+.++..++.+.+.+.|+++
T Consensus 254 ~~l~t-------L~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 254 RGMKT-------LKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred hCcch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 44433 3445566677778888889876
No 190
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=3.3e-21 Score=194.13 Aligned_cols=217 Identities=18% Similarity=0.263 Sum_probs=159.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh----HHHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF----DRDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~----~~~~~~ 154 (469)
+.+|+.+. ..+|++++|++.+ .++.+++++++.|+..++.+++++||.|+++...|.+. ...+..
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~g----------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~ 132 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIEG----------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPR 132 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHhC----------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHH
Confidence 45677654 6899999999985 34677888888999989989999999999988666443 344555
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+
T Consensus 133 ~-G~~v~~vd~~-------d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 133 W-GVETVFVDGE-------DLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred c-CcEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCC
Confidence 5 9999988742 78889988865 7899999999999999997 5558888999999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHh-cccc-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKM-SSFG-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~-~~~~-~~s~~~q~~ 311 (469)
...+.. + ..+ +..+++.|++|.++..|.++ |++++++..+.+.+... ...+ .+++..+++
T Consensus 196 ~~~~~~----~-~~~------------gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l 258 (403)
T PRK07810 196 TPLLQR----G-LPL------------GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWV 258 (403)
T ss_pred ccccCC----h-hhc------------CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 543221 1 111 45688899999998788887 78887665554433332 2222 366777776
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+.|+. +..+.++..++...+.+.|+++
T Consensus 259 ~l~~L~t-------l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 259 LLKGLET-------LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred HHhccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 6666654 3445555566667777888876
No 191
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=8.7e-21 Score=189.73 Aligned_cols=296 Identities=17% Similarity=0.189 Sum_probs=209.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCC-CCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHH----HhhhCCC
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFD-TSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRD----LKWRTGV 158 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~----~~~~~g~ 158 (469)
-+++.|+.+|++++ .+ .++|++|.|+|+++..+..++ ..+||.|++..-.|+..... .+.. |+
T Consensus 67 ~~e~aRe~va~~~~--------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~-Ga 137 (405)
T COG0520 67 LYEAAREAVARFLN--------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRT-GA 137 (405)
T ss_pred HHHHHHHHHHHHhC--------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhc-Cc
Confidence 46788999999987 56 489999999999999999998 68999999999888765433 3334 99
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
++..+|.++ +..++++.++..+++ ++++|.++.-+|.||.+.| +++|+++|+++|+++++|.+++-
T Consensus 138 ~v~~i~~~~--~g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~--- 203 (405)
T COG0520 138 KVRVIPLDD--DGLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA--- 203 (405)
T ss_pred EEEEEecCC--CCCcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc---
Confidence 999999883 446888999987765 8999999999999999999 55599999999999999999872
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----------------c--
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----------------S-- 299 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----------------~-- 299 (469)
+.....+.. .+..++..|..|+++-| ..+|.+.+.++.+.+..-.. .
T Consensus 204 -~h~~idv~~------------l~~Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~ 269 (405)
T COG0520 204 -GHLPIDVQE------------LGCDFLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAEL 269 (405)
T ss_pred -CccCCCchh------------cCCCEEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCc
Confidence 222233322 26778889999954325 35899999655544320000 0
Q ss_pred ----ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC---ceEEEEEecccccccC
Q 043923 300 ----SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN---AGLFCWVDMRHLLRSN 371 (469)
Q Consensus 300 ----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~---~g~~~~v~~~~~~~~~ 371 (469)
..++++......+.++++-.. .--++...++.++..+++.+.|+++ +++++.+. .+-.+.+.++..
T Consensus 270 p~rfe~gTpn~~~~i~l~aAl~~~~--~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~---- 343 (405)
T COG0520 270 PLRFEAGTPNIAGAIGLAAALDYLL--EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI---- 343 (405)
T ss_pred chhhccCCchHHHHHhHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC----
Confidence 011222233333333332211 1113556666677778888899887 68887654 355666777653
Q ss_pred ChhHHHHHHHHHHHhCCeEEeCCCCCCCC------CCCeEEEEeecC-CHHHHHHHHHHHHHHHH
Q 043923 372 TFEAEMELWKKIVYDVKLNISPGSSCHCT------EPGWFRVCFANM-SEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~GI~v~pg~~f~~~------~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~ 429 (469)
...++. ..|.++||.++.|.++... -++.+|+|++.. +++|+++++++|+++.+
T Consensus 344 ---~~~dv~-~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 ---HPHDVA-TLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ---CHHHHH-HHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 122344 4455779999999877642 134599999874 99999999999999865
No 192
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.1e-20 Score=189.90 Aligned_cols=217 Identities=19% Similarity=0.247 Sum_probs=153.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---hC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---RT 156 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~~ 156 (469)
.+|+. ....+|++++|++++ . ... ++++++++|+..++.+++++||.|+++.|+|......+.. ..
T Consensus 56 ~r~~~-p~~~~Le~~lA~~~g--------~-~~~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 124 (388)
T PRK07811 56 ARTGN-PTRTALEEQLAALEG--------G-AYG-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRW 124 (388)
T ss_pred cCCCC-ccHHHHHHHHHHHhC--------C-Cce-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCC
Confidence 34443 467999999999986 1 223 4445668999999999999999999999999865443322 12
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|+++..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 125 gi~~~~~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~ 188 (388)
T PRK07811 125 GVEYTPVDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASP 188 (388)
T ss_pred CeEEEEeCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 777777653 378889888865 7899999999999998866 556888899999999999999753
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYLLS 313 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~~~ 313 (469)
... . + ... +..+++.|++|.++.+| .+.||++++++.+.+.+...+.. + ..++...+.+.
T Consensus 189 ~~~-~---p-~~~------------gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~ 251 (388)
T PRK07811 189 YLQ-Q---P-LAL------------GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTL 251 (388)
T ss_pred ccC-C---c-hhh------------CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 221 1 1 111 34588899999998654 67899998777666655444333 2 23444444444
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
..|+. +..+.++..++...+.+.|+++
T Consensus 252 ~~L~t-------l~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 252 RGLKT-------LAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred hccCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 44443 3445555667778888888876
No 193
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.89 E-value=4.8e-21 Score=192.46 Aligned_cols=216 Identities=15% Similarity=0.183 Sum_probs=152.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~ 154 (469)
..+|+.+ ...+|++++|++++ .+..++++++++|+..++.+++++||.|+++.|.|...... +..
T Consensus 53 y~r~~~p-~~~~le~~lA~l~g----------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~ 121 (391)
T TIGR01328 53 YSRLGNP-TVSNLEGRIAFLEG----------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTK 121 (391)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhc
Confidence 4456654 46889999999986 23467788888999999999999999999999988754332 334
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++.+ |++++++++++ ++++|++++|+||+|.+.+. ++|+++|+++|+++|+|++|+
T Consensus 122 ~-G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~dl---~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 122 F-GIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLIDM---ERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred C-CeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCCc
Confidence 4 8888888754 67888888865 78999999999999999984 458888889999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHh--ccc-c-cCcHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKM--SSF-G-LVSSQTQ 309 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~--~~~-~-~~s~~~q 309 (469)
...+. . . + ..+..+++.|+||.+|.+|.++ |++++ ++.+.+.++.. ... + .+++...
T Consensus 185 ~~~~~-~---~---~----------~~g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a 246 (391)
T TIGR01328 185 TPMLT-N---P---V----------ALGVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDA 246 (391)
T ss_pred hhccC-C---c---h----------hcCCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHH
Confidence 53221 1 1 1 1134478899999999888875 66666 44444433321 112 2 2444444
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+++...|+. +..+.++..++.+.+.+.|+++
T Consensus 247 ~l~l~~L~t-------l~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 247 WLILRGLKT-------LNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred HHHHhCcCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 444443433 3344556667778888888876
No 194
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.89 E-value=6.8e-21 Score=191.02 Aligned_cols=217 Identities=20% Similarity=0.296 Sum_probs=154.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH----HHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD----RDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~ 154 (469)
..+|+.+ ...+|++.+|++++ .+.+++++++++|+..++.+++++||+|+++.+.|.+.. ..+..
T Consensus 48 y~r~~~p-~~~~le~~la~l~g----------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~ 116 (380)
T TIGR01325 48 YSRYANP-TVAAFEERIAALEG----------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPR 116 (380)
T ss_pred eecCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHH
Confidence 3456644 46899999999875 356788999999999999999999999999999887643 23444
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++.+ |++++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 117 ~-g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~ 179 (380)
T TIGR01325 117 F-GIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFA 179 (380)
T ss_pred h-CCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCc
Confidence 5 9999888753 67888887754 7899999999999999987 5558888899999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhccccc-CcHHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSSFGL-VSSQTQYLL 312 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~~~~-~s~~~q~~~ 312 (469)
...+. . + ..+ +..+++.|+||.++.+|.++ |+++++++.+..........+. +++...+
T Consensus 180 ~~~~~-~---p-l~~------------g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~-- 240 (380)
T TIGR01325 180 TPVLQ-Q---P-LKL------------GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAW-- 240 (380)
T ss_pred ccccC-C---c-hhh------------CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHH--
Confidence 54221 1 1 112 34578889999998788887 6677655433332222223332 3333333
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.+++.... +..+.++..+++..+.+.|+++
T Consensus 241 -~~l~~l~t----l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 241 -VLLKGLET----LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred -HHHhccCc----HHHHHHHHHHHHHHHHHHHHcC
Confidence 33333322 4455666777888889999887
No 195
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.89 E-value=1.5e-20 Score=189.64 Aligned_cols=216 Identities=17% Similarity=0.223 Sum_probs=152.5
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~ 154 (469)
..+|+.+ ...+|++++|++++ .+..+++++++.|+..++.+++++||+|+++.|.|..... .+..
T Consensus 59 y~r~~~p-~~~~le~~lA~l~g----------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~ 127 (403)
T PRK07503 59 YSRISNP-TLALLEQRMASLEG----------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGE 127 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhh
Confidence 3455544 46899999999885 2334666677889999999999999999999999976433 2344
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+
T Consensus 128 ~-G~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a 190 (403)
T PRK07503 128 F-GVTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYC 190 (403)
T ss_pred C-CEEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCc
Confidence 5 9999888753 67888888865 7899999999999999988 5558888889999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--ccc--ccCcHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--SSF--GLVSSQTQ 309 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--~~~--~~~s~~~q 309 (469)
..+. .. ++ .+ +..+++.|+||.+|.+| ++.|+++.+ +.+.+.++.. ... ..++++.+
T Consensus 191 ~~~~-~~---~l-~~------------g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~~s~~~a 252 (403)
T PRK07503 191 TPYL-QR---PL-EL------------GADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAVMSPFDA 252 (403)
T ss_pred cccc-CC---ch-hh------------CCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCCCCHHHH
Confidence 5422 11 11 11 34588899999998665 788998864 4454444321 211 23555655
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+.+-|+. +..+.++..++...+.+.|+++
T Consensus 253 ~l~l~~L~t-------l~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 253 FLLMRGLKT-------LALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHcCcch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 555444433 3334444456677778888876
No 196
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.89 E-value=1.6e-20 Score=191.37 Aligned_cols=311 Identities=14% Similarity=0.103 Sum_probs=190.9
Q ss_pred HHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHHHhhhCCCE---------
Q 043923 92 KKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRDLKWRTGVE--------- 159 (469)
Q Consensus 92 r~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~~~~~~g~~--------- 159 (469)
..++|+++....+. +. .+.+++++++++|+..++... .++ ..|+...++|.+....+... +..
T Consensus 86 ~~~la~~l~~~~~~--~~-~~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~-~~~~~~~~~~~~ 160 (425)
T PRK08088 86 YLELCEKMNQKVPG--DF-AKKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLAL-TGKVNPYSAGMG 160 (425)
T ss_pred HHHHHHHHHHhCCC--CC-CCEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHh-hCCCCccccCCC
Confidence 34778777654331 11 246666666667666665553 344 45667799998876554433 211
Q ss_pred -------EEEeeccCCCCccc--CHHHHHHHHHHHHhcCCceeEEEEecC--CCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 160 -------IVPIQCTSLNGFQI--TETAIEEAYQLAQKRHLKVKGVLVTNP--SNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 160 -------~~~v~~~~~~~~~~--d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
.+++|.+. .+... +++.+++.++.. ....++.+|++. | ++++....+.+.+++|.++|++||+++|
T Consensus 161 ~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~-~~~~~~aavi~E-pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI 237 (425)
T PRK08088 161 LMPGHVYRALYPCPL-HGVSEDDAIASIERIFKND-AAPEDIAAIIIE-PVQGEGGFYAASPAFMQRLRALCDEHGIMLI 237 (425)
T ss_pred CCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHhc-cCCCceEEEEEC-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 11122221 11111 144566666421 112356655444 5 6787788899999999999999999999
Q ss_pred EeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcH
Q 043923 229 SDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSS 306 (469)
Q Consensus 229 ~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~ 306 (469)
+||+|.++.+.+. ..++ +. .+.+..+.||||+++ +|+|+||++++++ +.+.+.... ..+..++
T Consensus 238 ~Dev~~g~g~~g~-~~~~-~~-----------~~~~pdi~s~sK~l~-~G~rig~v~~~~~-~~~~~~~~~~~~t~~~~~ 302 (425)
T PRK08088 238 ADEVQTGAGRTGT-LFAM-EQ-----------MGVAADLTTFAKSIA-GGFPLAGVTGRAE-VMDAIAPGGLGGTYAGNP 302 (425)
T ss_pred EeccccCCCcCcc-hhHH-hh-----------cCCCCCEEEEecccc-CCCcceeeEecHH-HHhhcCCCCCCCCCCcCH
Confidence 9999997433322 1111 11 123334689999998 9999999999654 444333221 1233678
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc--CChhHHHHHHHHHH
Q 043923 307 QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIV 384 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll 384 (469)
+.|.++.++|+.... .+++++.++..++.++.+.+.+.+.+........|+++|+.+...... ........++..++
T Consensus 303 ~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~ 381 (425)
T PRK08088 303 IACAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARAR 381 (425)
T ss_pred HHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHH
Confidence 899999999987654 455666665555555555555455543111112278999998532210 01122345566655
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.||.+.|+..| ++.+|++++. +++++|++++++|++++...
T Consensus 382 -~~Gv~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 382 -DKGLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred -hCCCEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 569998876544 3679999985 58999999999999998753
No 197
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=1.4e-20 Score=190.69 Aligned_cols=285 Identities=15% Similarity=0.118 Sum_probs=186.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCCCEEEE---eeccC--CCCcccCHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTS--LNGFQITETA 177 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~--~~~~~~d~~~ 177 (469)
.+.+++++++++|+..+++... .+...|+..+..|++....+....+..... .|+.+ ......|++.
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 4799999999999999998752 234679999999988764433321321100 01000 0001136788
Q ss_pred HHHHHHHHHhcCCceeEEEEecCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM--SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~--s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
+++.+.+ ++++|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.++...+.. .. .....
T Consensus 176 l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~-~~-~~~~~---- 242 (406)
T PRK12381 176 ASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL-YA-YMHYG---- 242 (406)
T ss_pred HHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch-hh-hHhhC----
Confidence 8887753 6776666 6999998654 7899999999999999999999999875443332 11 11111
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRL 333 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l 333 (469)
..+. +.|+||++| +|+|+||+++++. +.+.+.... ..+..+++.+.++.+.|+... ....++.+
T Consensus 243 ----v~pD---i~t~sK~l~-gG~~ig~~~~~~~-~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-----~~~~~~~~ 308 (406)
T PRK12381 243 ----VTPD---VLTTAKALG-GGFPIGAMLTTEK-CASVMTVGTHGTTYGGNPLASAVAGKVLELIN-----TPEMLNGV 308 (406)
T ss_pred ----CCCC---EEEehhhhh-CCCceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-----hccHHHHH
Confidence 1122 249999998 9999999999544 444443321 122357788887777664321 12356667
Q ss_pred HHHHHHHHHHHHhcC--Cc--eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 334 KQRHRKLVSGLEKAG--IS--CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 334 ~~~~~~l~~~L~~~g--~~--v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+++.+++.+.|++++ .. ......|.++++.++.... .....+.. .+.++||.+.+. +++.+|+++
T Consensus 309 ~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~-~l~~~Gv~v~~~------g~~~lRl~p 377 (406)
T PRK12381 309 KQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQ-EAAKAGVMVLIA------GPNVVRFAP 377 (406)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHH-HHHHCCcEEeeC------CCCEEEEeC
Confidence 777788888887653 22 1222346888888764210 11223444 455779999754 245899999
Q ss_pred ec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 410 AN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 410 ~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+. ++++++++++++|.+++++..+
T Consensus 378 ~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 378 ALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHh
Confidence 87 5999999999999999976543
No 198
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=5.4e-20 Score=184.78 Aligned_cols=293 Identities=13% Similarity=0.104 Sum_probs=190.6
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh--------------cCCCCEEEEccCCCcChHHHH
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL--------------AEPGEAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--------------~~~gd~Vl~~~P~y~~~~~~~ 152 (469)
-+.+|++++|+|++ .+..++.+++..|...++.+| .+.+|.|++..-.|......+
T Consensus 148 ~h~~LE~~LA~f~g----------~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~ 217 (476)
T PLN02955 148 YHRLLESSLADLKK----------KEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGV 217 (476)
T ss_pred HHHHHHHHHHHHHC----------CCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHH
Confidence 35789999999985 455666666666777777776 245677888888888887777
Q ss_pred hhhC---CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 153 KWRT---GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 153 ~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
+... +++++.++.+ |++.|++.++... .+.++ |++.+ -++.|.+.+ +++|.++|++||+++|
T Consensus 218 ~ls~~~~~a~~~~f~HN-------D~~~Le~~L~~~~---~~~~~-Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~Li 283 (476)
T PLN02955 218 RLAERQGNVEVFVYRHC-------DMYHLNSLLSSCK---MKRKV-VVTDSLFSMDGDFAP---MEELSQLRKKYGFLLV 283 (476)
T ss_pred HhccccCCceEEEeCCC-------CHHHHHHHHHhCC---CCceE-EEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEE
Confidence 6531 4677777643 7899999886531 13344 55555 789999999 5557788889999999
Q ss_pred EeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-ccc--ccCc
Q 043923 229 SDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSF--GLVS 305 (469)
Q Consensus 229 ~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~~~s 305 (469)
+||+|+.+.++... ....+...- ..+.+++++||||++|+.| ||+++++. +.+.+... ..+ ++..
T Consensus 284 VDEAH~~Gv~G~~G-~G~~e~~g~-------~~di~ii~~TLsKA~G~~G---Gfi~gs~~-~~~~l~~~~~~~ifStal 351 (476)
T PLN02955 284 IDDAHGTFVCGENG-GGVAEEFNC-------EADVDLCVGTLSKAAGCHG---GFIACSKK-WKQLIQSRGRSFIFSTAI 351 (476)
T ss_pred EcccccCceecCCC-CcHHHHhCC-------CCCCcEEEEeCccchhccC---ceeecHHH-HHHHHHHhCCCCeecccc
Confidence 99999976665432 233332210 2467899999999998777 99998554 55555443 222 2222
Q ss_pred HH-HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHH
Q 043923 306 SQ-TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIV 384 (469)
Q Consensus 306 ~~-~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll 384 (469)
++ ...++.+.+.-. .. -..+++++.++.+++.+. .|+.+ .+.++.+.+... ....++.++|+
T Consensus 352 pp~~aaa~laal~l~---~~-~~~~r~~L~~n~~~fr~~---~G~~~----~sPI~pI~ig~~------~~a~~~~~~L~ 414 (476)
T PLN02955 352 PVPMAAAAYAAVVVA---RK-EKWRRKAIWERVKEFKAL---SGVDI----SSPIISLVVGNQ------EKALKASRYLL 414 (476)
T ss_pred cHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHh---cCCCC----CCCEEEEEeCCH------HHHHHHHHHHH
Confidence 22 222222222211 11 123566777777777763 36553 234555555432 23345566665
Q ss_pred HhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 385 YDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++||.+.+..+... .+...+||+++. +++++|++++++|.++.+....
T Consensus 415 -~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~ 464 (476)
T PLN02955 415 -KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNT 464 (476)
T ss_pred -HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 66999987665443 234579999977 5999999999999998776655
No 199
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.88 E-value=1.9e-21 Score=193.79 Aligned_cols=282 Identities=15% Similarity=0.149 Sum_probs=191.7
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCC-CEEEEccCCCcChHHH---HhhhCCCE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPG-EAFLLPTPYYPGFDRD---LKWRTGVE 159 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~g-d~Vl~~~P~y~~~~~~---~~~~~g~~ 159 (469)
+.++|+.+|++++ +++++|++|+|+++++..++.++. .+| +.|++....|+.+... ++.. |++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~-G~~ 114 (353)
T TIGR03235 44 VERARKQVAEALG--------ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERN-GFT 114 (353)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhc-CCE
Confidence 4678888888875 578899999999999999988875 355 7788887767655433 3445 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++++ ++
T Consensus 115 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~~---~~I~~l~~~~~~~~ivD~a~~---~g 180 (353)
T TIGR03235 115 VTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQPI---REIAEVLEAHEAFFHVDAAQV---VG 180 (353)
T ss_pred EEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccCH---HHHHHHHHHcCCEEEEEchhh---cC
Confidence 99999873 456899999988754 78999999999999999985 558888999999999999987 33
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH-HHH---------hcccccCcHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA-ATK---------MSSFGLVSSQTQ 309 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~-~~~---------~~~~~~~s~~~q 309 (469)
... ..+. ..+..+++.|.+|.+|.+| +|+++++++.+... ... ....++.+....
T Consensus 181 ~~~-~~~~------------~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 245 (353)
T TIGR03235 181 KIT-VDLS------------ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLI 245 (353)
T ss_pred Ccc-cccc------------ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHH
Confidence 222 1211 2245677789999887555 89998865532111 110 001233444444
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecccccccCChhHHHHHHHHHHHh
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYD 386 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~ 386 (469)
.++.++++. .....+..++++++..+++++.|.+.|+++..++. ..++.+.+++ . +..+ +...|++
T Consensus 246 ~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~------~~~~-v~~~L~~ 314 (353)
T TIGR03235 246 VGMGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDG-V------NSEA-LIVNLRA 314 (353)
T ss_pred HHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCC-c------CHHH-HHHHHhC
Confidence 444444442 13345677888999999999999888888764322 1234444442 1 1123 4444555
Q ss_pred CCeEEeCCCCCCCCC--CCeEEEEeecCCHHHHHHH
Q 043923 387 VKLNISPGSSCHCTE--PGWFRVCFANMSEDTLKLS 420 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~--~~~iRi~~~~~~~e~i~~~ 420 (469)
||.|.+|..|.... +.++|.+++. +++++..+
T Consensus 315 -~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~~~~~ 348 (353)
T TIGR03235 315 -DAAVSTGSACSSSKYEPSHVLQAMGL-DTDRARGA 348 (353)
T ss_pred -CeEEEchhhcCCCCCCCCHHHHHcCC-CHHHhCcc
Confidence 99999999987543 4478888884 66555443
No 200
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.88 E-value=3.4e-21 Score=178.49 Aligned_cols=368 Identities=17% Similarity=0.253 Sum_probs=258.9
Q ss_pred ccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccc----cC--hHHHHHHHhcCCCccccccCCcccccccc
Q 043923 7 KATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQ----LS--FDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
.++....++.+|++.+-..+..++ +| .-|||++|... -| .+.++++-++.... ....
T Consensus 27 ~~s~V~maPpDpILGVTeAfk~D~-----n~-~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~-----------~ldK 89 (427)
T KOG1411|consen 27 WWSHVEMAPPDPILGVTEAFKKDP-----NP-KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL-----------SLDK 89 (427)
T ss_pred hhhcCCCCCCCCcccHHHHHhcCC-----Cc-ceeeecccceecCCCCeeeeHHHHHHHHHHhhh-----------cccc
Confidence 345566778888887755555544 44 44999998432 22 36666665553221 2334
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCCCcEEE--eCChHHHHHHHHHHh--cCCCCEEEEccCCCcChHHHHhhh
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVT-FDTSKIVL--TAGATSANETLMFCL--AEPGEAFLLPTPYYPGFDRDLKWR 155 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~~i~~--t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~ 155 (469)
.|-|..|.+++.+..+++.- |.+.+ +....|+. +-++|.|+.+....+ .-++..|.+++|+|.++..++..+
T Consensus 90 EYlpI~Gl~eF~k~sakLa~---G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~a 166 (427)
T KOG1411|consen 90 EYLPITGLAEFNKLSAKLAL---GDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDA 166 (427)
T ss_pred hhccccchHHHHHHHHHHhh---cCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccccc
Confidence 79999999999999999863 32222 23345543 455777887665554 347889999999999999999888
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec--CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN--PSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~--P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
|+.+..+.........+|.+.+.+.+.+. ....+++.+ .|||||.-.+.|+|++|.++.++.+.+-+.|-+|
T Consensus 167 -g~~~~~yrYyd~~t~gld~~g~ledl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY 240 (427)
T KOG1411|consen 167 -GLPVKFYRYYDPKTRGLDFKGMLEDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY 240 (427)
T ss_pred -CcceeeeeeccccccccchHHHHHHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhh
Confidence 99998877654455568877777666543 222344444 4999999999999999999999999999999999
Q ss_pred cccccCCC--CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEE--EecCHHHHHHH----HH-hccc-cc
Q 043923 234 SGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAI--YSNDDMVVAAA----TK-MSSF-GL 303 (469)
Q Consensus 234 ~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~l--i~~~~~~~~~~----~~-~~~~-~~ 303 (469)
.++.-+.. +..++.-+++ ...+++++.|++|.+|+.|-|+|.+ +|.+....... +. .+++ .+
T Consensus 241 QGfaSG~~d~DA~avR~F~~--------~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSn 312 (427)
T KOG1411|consen 241 QGFASGDLDKDAQAVRLFVE--------DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSN 312 (427)
T ss_pred cccccCCchhhHHHHHHHHH--------cCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccC
Confidence 98533221 2233344444 4467888999999999999999987 56554433322 22 2333 33
Q ss_pred CcHHHHHHHHHHhcCchhhHHHH---HHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNYI---SENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~~---~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
++.....++..+|.+.+.-.+|. +.+.+++...|..|.+.|++.| |+.+..+-|+|.+-.+..
T Consensus 313 PP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p---------- 382 (427)
T KOG1411|consen 313 PPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP---------- 382 (427)
T ss_pred CCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH----------
Confidence 44567778888999876544444 4456788888999999998874 444667778998776653
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.++.+.+++.|.+. .++ |||++.++...+..+.++|.++.+
T Consensus 383 -eQv~~l~ke~~iYmT--------~dG--RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 383 -EQVDWLTKEYHIYLT--------KDG--RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -HHHHHHHhhheeeec--------cCc--eEeeccccccCCcccchhhHhHhc
Confidence 457888899999875 233 999998888888888888887754
No 201
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=2.4e-20 Score=189.11 Aligned_cols=285 Identities=14% Similarity=0.140 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC---------CC-CEEEEccCCCcChHHHHhhhCC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE---------PG-EAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~---------~g-d~Vl~~~P~y~~~~~~~~~~~g 157 (469)
..+|.+.++++.+ .+.+++++++++|+..++.++.. +| +.|++..-.|.+....+... +
T Consensus 85 ~~~l~~~l~~~~~----------~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~-~ 153 (401)
T PRK00854 85 LAPLYEELAALTG----------SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGF-S 153 (401)
T ss_pred HHHHHHHHHhhCC----------CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhc-c
Confidence 4556666666542 46899999999999999988842 23 57777777776643222211 1
Q ss_pred -------------CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCH-HHHHHHHHHHHhc
Q 043923 158 -------------VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSR-NELNLLVNIITEK 223 (469)
Q Consensus 158 -------------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~-e~l~~l~~~~~~~ 223 (469)
..+..+|. .|++.+++.+.+ ++++|++++|+||+|.+++. +.+++|.++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~ 220 (401)
T PRK00854 154 TDPDARGGFGPFTPGFRVVPF-------GDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN 220 (401)
T ss_pred CCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 12222221 378889888764 78999999999999999974 4699999999999
Q ss_pred CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhcc--
Q 043923 224 NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSS-- 300 (469)
Q Consensus 224 ~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~-- 300 (469)
|+++|+||+|.++.+.+..+ . ..... ....+++ ++|+++ .| +|+||++++++. .+.+.....
T Consensus 221 gi~lI~DEv~~g~g~~g~~~-~-~~~~g--------~~~D~~~---~~K~l~-gg~~~ig~v~~~~~~-~~~l~~~~~~~ 285 (401)
T PRK00854 221 NVTLILDEIQTGLGRTGKLL-A-EEHEG--------IEADVTL---IGKALS-GGFYPVSAVLSNSEV-LGVLKPGQHGS 285 (401)
T ss_pred CCEEEEechhhCCCCCchHh-H-HhhcC--------CCCCEEE---eccccc-CCccCeEEEEEcHHH-HhcccCCCCCC
Confidence 99999999998643332211 1 01110 1122222 479997 55 799999996554 343332211
Q ss_pred cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce---ecCCceEEEEEecccccccCChhHHH
Q 043923 301 FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC---LKSNAGLFCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 301 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v---~~~~~g~~~~v~~~~~~~~~~~~~~~ 377 (469)
.+..+++.+.++.+.|+... + ....+.++++.+++.+.|++++... ..+.+ .++.+.+.... ....
T Consensus 286 t~~~~~~~~aa~~a~L~~l~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g-~~~~i~~~~~~-----~~~~ 354 (401)
T PRK00854 286 TFGGNPLACAVARAALKVLT---E--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRG-LMLAVELEPEA-----GGAR 354 (401)
T ss_pred CCCcCHHHHHHHHHHHHHHH---H--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccc-eEEEEEEecCc-----hhHH
Confidence 12357788888877775321 1 2245667777788888888765332 23344 44444442110 1234
Q ss_pred HHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
++++.|+ ++||.+.+. ..+++|+++.. ++++++++++++|++++.
T Consensus 355 ~~~~~L~-~~GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 355 QYCEALK-ERGLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHH-HCCeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 5667766 469999753 24689999864 599999999999998863
No 202
>PRK05968 hypothetical protein; Provisional
Probab=99.88 E-value=7.8e-20 Score=183.70 Aligned_cols=287 Identities=15% Similarity=0.157 Sum_probs=187.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH----HHHhhh
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD----RDLKWR 155 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~ 155 (469)
.+|+.+ ...+|++++|++++ . ... +++++++.|+..++.+++++||+|+++.+.|.... ..+...
T Consensus 58 ~r~~~p-~~~~le~~lA~l~g--------~-~~a-v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 126 (389)
T PRK05968 58 SRGDNP-TVRAFEEMLAKLEG--------A-EDA-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRM 126 (389)
T ss_pred cCCCCh-hHHHHHHHHHHHhC--------C-CcE-EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc
Confidence 344433 36899999999986 1 233 44566678999999889999999999999998643 344455
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|++++.++.+ |++++++++. ++++|++++|+||+ ++..++++|+++|+++|+++|+|++|+.
T Consensus 127 -G~~v~~vd~~-------d~~~l~~~i~-------~tklV~ie~pt~~~---~~~~dl~~i~~la~~~gi~vivD~a~a~ 188 (389)
T PRK05968 127 -GVEVDYVDGR-------DEEAVAKALP-------GAKLLYLESPTSWV---FELQDVAALAALAKRHGVVTMIDNSWAS 188 (389)
T ss_pred -CceEEEeCCC-------CHHHHHHhcc-------cCCEEEEECCCCCC---CcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 9999888643 6788887762 67899998766665 4557788899999999999999999975
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhc--cc-ccCcHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMS--SF-GLVSSQTQYL 311 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~--~~-~~~s~~~q~~ 311 (469)
..+.. + ..+ +..+++.|+||.++.+| ++.|+++++++.+ +.++... .. ..+++..++.
T Consensus 189 ~~~~~----p-~~~------------g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~-~~l~~~~~~~~g~~~~~~~A~~ 250 (389)
T PRK05968 189 PVFQR----P-ITL------------GVDLVIHSASKYLGGHSDTVAGVVAGSKEHI-ARINAEAYPYLGAKLSPFEAWL 250 (389)
T ss_pred hhccC----c-hhc------------CCcEEEeeccccccCCCCeEEEEEEECHHHH-HHHHHHHHHhCCCCCChHHHHH
Confidence 43221 1 111 33577889999998655 6889988755443 3333221 12 2356666565
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC-----------CceEEEEEecccccccCChhHHHH
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS-----------NAGLFCWVDMRHLLRSNTFEAEME 378 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~-----------~~g~~~~v~~~~~~~~~~~~~~~~ 378 (469)
+...|+. +..+.++..++.+.+.+.|+.+ +++ |..| ..|-.+.+.+.+. .+..+
T Consensus 251 ~l~~L~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~------~~~~~ 317 (389)
T PRK05968 251 LLRGLRT-------LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG------IDVRA 317 (389)
T ss_pred HHcccCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH------HHHHH
Confidence 5555543 2344444555667788888877 453 3322 1233555666531 12234
Q ss_pred HHHHHHHhCCeEEeCCCCCC--------------C-------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 379 LWKKIVYDVKLNISPGSSCH--------------C-------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~--------------~-------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++..| +..++.+.-|..+. . ..++.+|+|++. |+.+.+++-|+++++.
T Consensus 318 f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~ 386 (389)
T PRK05968 318 FADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAA 386 (389)
T ss_pred HHHhC-CccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHH
Confidence 55444 45576666665544 0 014689999995 5566677777777763
No 203
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=6.7e-20 Score=188.99 Aligned_cols=315 Identities=14% Similarity=0.144 Sum_probs=201.6
Q ss_pred cccC---CCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHH--HH-HhcCCCC----EEEEccCCCcCh
Q 043923 79 LALF---QDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETL--MF-CLAEPGE----AFLLPTPYYPGF 148 (469)
Q Consensus 79 ~~~Y---~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~--~~-~l~~~gd----~Vl~~~P~y~~~ 148 (469)
...| +..+|..+++.++.+++.+.+| ++...+..++|+++.+..+ ++ .+.++|| +|+++.|.|+.+
T Consensus 99 ~tpYq~e~~sqG~lel~~~~~~~la~l~G----~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~ 174 (481)
T PRK04366 99 LHPLQPEETVQGALELMYELQEWLKEITG----MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTN 174 (481)
T ss_pred CCCCCChhhhhHHHHHHHHHHHHHHHHhC----CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhH
Confidence 4456 3456889999999999998877 4445666667777665533 22 3456776 999999999999
Q ss_pred HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 149 DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 149 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
...+... |++++.+|++ .++.+|++++++++++ ++++|++++|+ |||.+ .+++++|+++|+++|++++
T Consensus 175 ~~~~~~~-G~~vv~v~~~--~~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~i 242 (481)
T PRK04366 175 PASAAMA-GFKVVEIPSN--EDGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLY 242 (481)
T ss_pred HHHHHHc-CCEEEEeecC--CCCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEE
Confidence 9888777 9999999986 3567999999998865 78999999998 99954 3578899999999999999
Q ss_pred EeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC----cceEEEEEecCHHHHHHHH------Hh
Q 043923 229 SDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP----GFRVGAIYSNDDMVVAAAT------KM 298 (469)
Q Consensus 229 ~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----GlRiG~li~~~~~~~~~~~------~~ 298 (469)
+|.++.....+ . .+.. ..+..++++|.+|+||.| |-.+|++.+.+..... +. ..
T Consensus 243 VD~a~~~~~~g-~--~~~~------------~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~-lp~~~v~~~g 306 (481)
T PRK04366 243 YDGANLNAILG-K--ARPG------------DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPF-LPVPVVEKDG 306 (481)
T ss_pred EEecChhhhcc-c--CCcc------------ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhh-CCCCeeeccC
Confidence 99998521111 1 1111 235678889999998744 4567888775443322 10 00
Q ss_pred ccc---------------ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEE--EE
Q 043923 299 SSF---------------GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF--CW 361 (469)
Q Consensus 299 ~~~---------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~--~~ 361 (469)
..+ ++.+.....++..++.... .+-+++..++...+.+++.+.|+++ +++..... ++ +.
T Consensus 307 ~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G--~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~-~~~~~~ 382 (481)
T PRK04366 307 DRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG--AEGLREVSEDAVLNANYLKARLKDI-YDLPYDRP-CMHEFV 382 (481)
T ss_pred CceeecccccccCCCcccccCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCC-eeEEEE
Confidence 000 0011122222222222211 2334455566666778888888876 33322111 11 22
Q ss_pred EecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 362 VDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 362 v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++++.. .... .+..++.++|. ++||.+. +..+.....+.+|++++. .++++|+.+++.|+++.++..+
T Consensus 383 ~~~~~~-~~~g-~~~~~v~~~L~-~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 383 LSGKKL-KETG-VRTLDIAKRLL-DYGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred EECccc-cccC-CCHHHHHHHHH-HCCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 333211 0000 12335566665 6699865 222222225689999976 4899999999999999876654
No 204
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=4.6e-20 Score=185.40 Aligned_cols=282 Identities=16% Similarity=0.191 Sum_probs=182.4
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~ 162 (469)
...+|++.+|++++ .+ +.+++++| +.++..++. ++++||.|+++.|.|++... .++.. |++++.
T Consensus 55 ~~~~le~~lA~l~g--------~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~-G~~v~~ 122 (390)
T PRK08064 55 TREALEDIIAELEG--------GT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRF-GIEHTF 122 (390)
T ss_pred hHHHHHHHHHHHhC--------CC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHc-CCEEEE
Confidence 35788999999886 23 45666555 568887775 67899999999999985443 33445 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |++++++++++ ++++|++++|+||||.+.+. ++|.++|+++|+++|+|++|...... .
T Consensus 123 v~~~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~~-~- 184 (390)
T PRK08064 123 VDMT-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTDI---RGVVKLAKAIGCLTFVDNTFLTPLLQ-K- 184 (390)
T ss_pred ECCC-------CHHHHHHhcCC------CceEEEEECCCCCCcEeccH---HHHHHHHHHcCCEEEEECCCCccccc-C-
Confidence 8753 67888887764 78999999999999999875 45788888999999999999753211 1
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhcccccC--cHHHHHHHHHHhcCc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSFGLV--SSQTQYLLSALLSDK 319 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~~~~--s~~~q~~~~~~l~~~ 319 (469)
+ ..+ +.++++.|+||.++ .+|+..|++++.++.+.+.+......+.. ++...+. ++...
T Consensus 185 --~-~~~------------g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~gl 246 (390)
T PRK08064 185 --P-LDL------------GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLRGL 246 (390)
T ss_pred --c-hhh------------CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHccc
Confidence 1 112 45688899999985 34566788887666666666555543322 2333332 23332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcC-C-ceec----------------CCceEEEEEecccccccCChhHHHHHHH
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKAG-I-SCLK----------------SNAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~-~v~~----------------~~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
. .+..+.++..++...+.+.|++++ + .+.- ...|-.+.+.+.+. . .+.
T Consensus 247 ~----tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~------~----~~~ 312 (390)
T PRK08064 247 K----TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSE------E----AVR 312 (390)
T ss_pred C----cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCH------H----HHH
Confidence 2 245566666777788888888762 2 1111 11233555666421 1 233
Q ss_pred HHHHhCCe---EEeCCC------------CCCC---------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 382 KIVYDVKL---NISPGS------------SCHC---------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 382 ~ll~~~GI---~v~pg~------------~f~~---------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++...++ .+.-|. ++.. -.++.+|+|++. |+.+.+++.|.+++++.++
T Consensus 313 ~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~~~ 385 (390)
T PRK08064 313 QFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYVEE 385 (390)
T ss_pred HHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhccc
Confidence 45555566 444441 1111 115689999995 4556666666666665443
No 205
>PLN00144 acetylornithine transaminase
Probab=99.87 E-value=5.7e-20 Score=184.38 Aligned_cols=289 Identities=16% Similarity=0.110 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---C------C------CCEEEEccCCCcChHHHHhh
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA---E------P------GEAFLLPTPYYPGFDRDLKW 154 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~------~------gd~Vl~~~P~y~~~~~~~~~ 154 (469)
+....+|+.+.+. ...+.+++++++++|++.+++... . + ..+|+....+|++....+..
T Consensus 57 ~~~~~la~~l~~~------~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s 130 (382)
T PLN00144 57 IPQVELAKRLVAS------SFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALA 130 (382)
T ss_pred HHHHHHHHHHHhc------CCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHh
Confidence 3445566665432 124689999999999999988652 1 0 24688888888776543332
Q ss_pred hCCCE------------EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHH--HHHHHHHH
Q 043923 155 RTGVE------------IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE--LNLLVNII 220 (469)
Q Consensus 155 ~~g~~------------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~--l~~l~~~~ 220 (469)
..+-. +..+|. .|++.+++.+.. .++++|++.--+|| |.+++.+. +++|.++|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~ 197 (382)
T PLN00144 131 LTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALC 197 (382)
T ss_pred cCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCC-CCCccCCHHHHHHHHHHH
Confidence 21211 111221 167888877642 26666665533788 55555444 99999999
Q ss_pred HhcCeEEEEeccccccccCCCCccc-hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--
Q 043923 221 TEKNIHLISDEIYSGTVFSSPGFVS-IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-- 297 (469)
Q Consensus 221 ~~~~~~iI~Deay~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-- 297 (469)
++||+++|+||+|.++...+..+.. ...+ .++ +.||||+++ +|+|+||++++++ +.+.+..
T Consensus 198 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~----------~PD----i~t~sK~l~-~G~pig~v~~~~~-~~~~~~~~~ 261 (382)
T PLN00144 198 DEAGALLVFDEVQCGLGRTGYLWAHEAYGV----------EPD----IMTLAKPLA-GGLPIGAVLVTEK-VASAINPGD 261 (382)
T ss_pred HHcCCEEEEechhhCCCccchHhhhhhcCC----------CCC----EEEeccccc-CCcceEEEEEcHH-HHhccCCCC
Confidence 9999999999999985444332111 1222 223 568999998 9999999999644 4443322
Q ss_pred hcccccCcHHHHHHHH---HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChh
Q 043923 298 MSSFGLVSSQTQYLLS---ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFE 374 (469)
Q Consensus 298 ~~~~~~~s~~~q~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~ 374 (469)
....+..+++.+.++. .+++++++ .++++...+.++ +.+.+.+.+++........|+++|+.+.. .
T Consensus 262 ~~~T~~~~pl~~aaa~a~l~~i~~~~~-~~~~~~~g~~l~---~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--~----- 330 (382)
T PLN00144 262 HGSTFAGGPLVCNAALAVLDKISKPGF-LASVAKKGEYLR---ELLRRKLGGNPHVKEVRGVGLLVGIQLDV--P----- 330 (382)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhhchH-HHHHHHHHHHHH---HHHHHHHhhCCCceeeecCceEEEEEecC--c-----
Confidence 1122336778888777 55555555 555555555553 34555555553211112378999999831 1
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 375 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 375 ~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
...++..++ ++||.+.|+.. .+.+|++++. ++++++++++++|.+++.+.
T Consensus 331 -~~~~~~~~~-~~Gv~i~~~~~-----~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 331 -AGPLVDACR-DSGLLVLTAGK-----GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred -cHHHHHHHH-HCCeEEeecCC-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 124555554 67999998721 3689999998 69999999999999998753
No 206
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=7.6e-20 Score=183.27 Aligned_cols=216 Identities=18% Similarity=0.173 Sum_probs=152.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRT 156 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~ 156 (469)
.+|+.+ ...+|++.+|++++ .+++++++|+++|+..++.+++++||.|+++.|.|..+...+ ...
T Consensus 48 ~r~~np-~~~~lE~~lA~l~g----------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~- 115 (385)
T PRK08574 48 SREENP-TLRPLEEALAKLEG----------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKF- 115 (385)
T ss_pred ECCCCc-cHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhcc-
Confidence 344433 57999999999985 457788899999999999999999999999999999876655 333
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|+++..+. +|++++++++++ .++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|+..
T Consensus 116 g~~v~~~~--------~d~~~l~~~i~~-----~~tklV~ie~p~NPtG~v~dl~---~I~~la~~~gi~livD~t~a~~ 179 (385)
T PRK08574 116 GVKVVLAY--------PSTEDIIEAIKE-----GRTKLVFIETMTNPTLKVIDVP---EVAKAAKELGAILVVDNTFATP 179 (385)
T ss_pred CcEEEEEC--------CCHHHHHHhcCc-----cCceEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCCcc
Confidence 77776543 356888887753 1689999999999999999954 5888899999999999999632
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcc-cc-cCcHHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSS-FG-LVSSQTQYLLS 313 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~ 313 (469)
.. .. + + ..+..+++.|+||.++.+|-.+ |++++.++.+.+.+...+. ++ .++++..+.+.
T Consensus 180 ~~-~~---~---l----------~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l 242 (385)
T PRK08574 180 LL-YR---P---L----------RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVL 242 (385)
T ss_pred cc-CC---h---h----------hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 11 11 1 1 1145688999999997666554 7677756655554443332 22 24444444444
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+-++. +..+.++..++...+.+.|+.+
T Consensus 243 ~~l~t-------L~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 243 RGLKT-------LEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred cccCc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 44433 3344555556777788888766
No 207
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.87 E-value=2.8e-20 Score=184.87 Aligned_cols=296 Identities=16% Similarity=0.177 Sum_probs=190.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCC
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGV 158 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~ 158 (469)
+.+|+.+ ...+|++++|++.+ .+++++++|+++|+.+++. ++++||.|+++.+.|......+... ..
T Consensus 48 Y~R~~~p-~~~~le~~lA~leg----------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~-~~ 114 (364)
T PRK07269 48 YTRTKNP-TRAKLEETLAAIES----------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQ-EK 114 (364)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHH-Hh
Confidence 4566655 46999999999984 6789999999999999984 5699999999999998765433321 11
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+. .+.. .|..|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...++
T Consensus 115 ~~-~~~~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~ 180 (364)
T PRK07269 115 EG-RFHF----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY 180 (364)
T ss_pred cC-cEEE----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc
Confidence 00 1111 133578899988865 8999999999999999886 56688889999999999999864322
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSAL 315 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~ 315 (469)
. . + ... ...+++.|++|.++-+| .=.|+++++++.+.+.+...... ..++++..+.+..-
T Consensus 181 ~-~---p-l~~------------gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~ 243 (364)
T PRK07269 181 Q-R---P-IEL------------GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRG 243 (364)
T ss_pred C-C---c-hhh------------CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 1 1 1 112 34588899999996333 23588888666665544433322 23566666666666
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC-cee-cCCceEEEEEecccccccCChhHHHH---HHHHHHHhCCe
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI-SCL-KSNAGLFCWVDMRHLLRSNTFEAEME---LWKKIVYDVKL 389 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~---l~~~ll~~~GI 389 (469)
|+. +..+.++.+++...+.+.|+.+ ++ .|. |+.+|++. +.+........+.+..+ ++..+.....+
T Consensus 244 L~t-------L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~~~~~~~f~~~l~~~~~~~slG~~~sl 315 (364)
T PRK07269 244 LKT-------LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMIS-FKVADETRIPHILNSLKVFTFAESLGGVESL 315 (364)
T ss_pred CCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEE-EEECCHHHHHHHHHhCCcceEccCCCCcCeE
Confidence 654 4555666677778888889877 33 454 66666544 44432100000000000 11111122345
Q ss_pred EEeCCCCCCC-----------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 390 NISPGSSCHC-----------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 390 ~v~pg~~f~~-----------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+.|++.++. -.++.+|+|++. |+.+.+++-|+++++
T Consensus 316 ~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 316 ITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred eeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 5556544322 125689999995 567777777777764
No 208
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=7.8e-20 Score=182.74 Aligned_cols=174 Identities=22% Similarity=0.352 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (469)
.++++++++++.+.++ .+++++|+|+++|+.+++.++ ++|||+|+++.|+|..+...+... |++++.++++.
T Consensus 30 g~~~~~~e~~la~~~g------~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~-G~~~v~vd~d~ 102 (376)
T TIGR02379 30 GPFSRRCETWLENRTG------TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIRP 102 (376)
T ss_pred cHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEecCC
Confidence 3566666666665533 578999999999999998887 799999999999999988888777 99999999985
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~ 246 (469)
++|.+|++++++++++ ++++|+ |+||+|...+.+ +|.++|++||++||+|++|+... +++....+
T Consensus 103 -~~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d~~---~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~- 168 (376)
T TIGR02379 103 -DTMNIDETLIESAITH------RTKAIV---PVHYAGVACDMD---TIMALANKHQLFVIEDAAQGVMSTYKGRALGS- 168 (376)
T ss_pred -CcCCCCHHHHHHhcCc------CceEEE---EeCCCCCccCHH---HHHHHHHHCCCEEEEECccccCCccCCcccCC-
Confidence 4588999999998865 788875 678899988754 58888999999999999998532 33322111
Q ss_pred hhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhc
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMS 299 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~ 299 (469)
+ . .+.+.|| +|.+. +|.+.|+++++++.+.+.++.++
T Consensus 169 --~------------~-~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 169 --I------------G-HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred --C------------C-CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence 1 1 1122232 48886 78889999998777766665544
No 209
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=8.5e-20 Score=185.16 Aligned_cols=165 Identities=16% Similarity=0.228 Sum_probs=131.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~ 154 (469)
..+|+.+ ...+|++.+|++++ .+..++++++++|+..++.+++++||.|+++.|.|++... .+..
T Consensus 51 ysr~~~p-~~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 119 (418)
T TIGR01326 51 YSRLMNP-TTDVLEQRIAALEG----------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKR 119 (418)
T ss_pred eECCCCh-hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHH
Confidence 4556544 35899999999985 3467889999999999999999999999999999865433 3444
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+
T Consensus 120 ~-G~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 120 L-GIEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred c-CcEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCc
Confidence 5 9999988742 77889888865 7899999999999999987 5568888999999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecC
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSND 288 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~ 288 (469)
...+ ... + ..+.++++.|+||.+|.+|+|+||+++++
T Consensus 183 ~~~~-----~~~--l----------~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 183 TPYL-----CRP--I----------DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hhhc-----CCc--h----------hcCCeEEEECccccccCCccceEEEEEec
Confidence 3211 111 1 22568899999999998999999999854
No 210
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.87 E-value=1.3e-19 Score=183.75 Aligned_cols=286 Identities=16% Similarity=0.095 Sum_probs=175.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------CCCCEEEEccCCCcChHHHHhhhCCCEEEE---eeccCC--CCcccCH
Q 043923 111 TSKIVLTAGATSANETLMFCLA----------EPGEAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSL--NGFQITE 175 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~----------~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~--~~~~~d~ 175 (469)
.+.+++++++++|+..++..+. ..++.|++.+-.|.+.........+..... .+.... .-.-.|+
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 3688999999999999998763 134678888887776543322111211100 010000 0001278
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
+++++.++. +++++|++..++||||.+++ .+.+++|.++|++||+++|+||+|.++...+..+ . .....
T Consensus 168 ~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~-~~~~~--- 237 (400)
T PTZ00125 168 EALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-A-HDHEG--- 237 (400)
T ss_pred HHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-H-HHhcC---
Confidence 999988751 27888888888999999886 4559999999999999999999998743333211 1 11111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKR 332 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 332 (469)
..+.++ ++||.++.+++|+||++++++ +.+.+.... .....+++.+.++.+.|+... .. ...++
T Consensus 238 -----~~pd~~---~~sK~l~~g~~~ig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~~---~~~~~ 303 (400)
T PTZ00125 238 -----VKPDIV---LLGKALSGGLYPISAVLANDD-VMLVIKPGEHGSTYGGNPLACAVAVEALEVLK--EE---KLAEN 303 (400)
T ss_pred -----CCCCEE---EEcccccCCCcCcEEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc---CHHHH
Confidence 112222 478999843359999999654 444433221 122356777777766553211 00 11222
Q ss_pred HHHHHHHHHHHHHh----cCC-ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEE
Q 043923 333 LKQRHRKLVSGLEK----AGI-SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 407 (469)
Q Consensus 333 l~~~~~~l~~~L~~----~g~-~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi 407 (469)
.++..+++.+.|++ .++ ....+ .|.++|+.++... . ....+++..++ ++||.+.|+. .+++|+
T Consensus 304 ~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~v~~~~~~---~-~~~~~~~~~l~-~~Gv~v~~~~------~~~lRi 371 (400)
T PTZ00125 304 AQRLGEVFRDGLKELLKKSPWVKEIRG-KGLLNAIVFDHSD---G-VNAWDLCLKLK-ENGLLAKPTH------DNIIRF 371 (400)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEec-ccEEEEEEEccCc---c-hHHHHHHHHHH-HCCeEEeecC------CCEEEE
Confidence 33333444444443 233 22233 5678888776311 0 22345667766 6699998762 468999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 408 CFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 408 ~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
++.. .+++++++++++|.+++++..
T Consensus 372 ~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 372 APPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9754 599999999999999998763
No 211
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=2e-19 Score=180.20 Aligned_cols=295 Identities=14% Similarity=0.120 Sum_probs=177.1
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
.-+.++++.+|++++ . ++.+++++|+ .++..++..+.++||.|++..-.|......+... ....+.++.
T Consensus 56 ~~~~~~e~~la~~~~--------~-~~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~ 124 (370)
T PRK05937 56 SLLDDLEHKIAHFHG--------A-PEAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRH 124 (370)
T ss_pred HHHHHHHHHHHHHhC--------C-CeEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHc-CCceEEecC
Confidence 346889999999986 2 3446666666 4555566666678888888777887777776654 333333432
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
.|++++++.+++.....+++.+|++++++|++|.+.|.+ +|.++|+++|+++++||+|+...++... ..
T Consensus 125 -------~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~---eI~~l~~~~~~~livDea~~~G~~g~~g-~g 193 (370)
T PRK05937 125 -------NDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLE---QIIALSKKYHAHLIVDEAHAMGIFGDDG-KG 193 (370)
T ss_pred -------CCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHH---HHHHHHHHcCCEEEEECCccccccCCCC-Cc
Confidence 478999998875322222456777899999999999955 5888888999999999999843333211 11
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhh
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~ 322 (469)
...... ..+..+++.|+||++|..|. .+++.++...........+ ...+++...++.++++- +
T Consensus 194 ~~~~~~--------~~~~~~~~~tlsK~~g~~G~---~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~---l 259 (370)
T PRK05937 194 FCHSLG--------YENFYAVLVTYSKALGSMGA---ALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF---L 259 (370)
T ss_pred hHHhhC--------CCCCcEEEEechhhhhcCce---EEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH---H
Confidence 111100 11223567899999997673 3445333222222222221 12344444333333321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
.+..+..++++++.++++.+.|...+. +....+.++.. ...++ .+.|.++||.+.... ....
T Consensus 260 ~~~~~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~~~-------~~~~~-~~~L~~~gi~v~~~~---~~~~ 321 (370)
T PRK05937 260 SQEGELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLPGI-------SEQEL-YSKLVETGIRVGVVC---FPTG 321 (370)
T ss_pred HhCcHHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeCCh-------hHHHH-HHHHHHCCeeEEeeC---CCCC
Confidence 111223455666666777766643211 11111233321 12234 444567799887322 1234
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 403 GWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 403 ~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
+++|++++. .+++|++++++.|++++++..+.
T Consensus 322 ~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 322 PFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 689999976 49999999999999999988773
No 212
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.7e-19 Score=179.95 Aligned_cols=215 Identities=16% Similarity=0.178 Sum_probs=156.7
Q ss_pred cCCCC--CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 81 LFQDY--HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 81 ~Y~~~--~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
.|... ++...|+++||++.+ .+++++++|+++|+..++.+++++||+|++++|.|.++...+ ..
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le~----------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELEG----------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred eecCCCCchHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 35542 345799999998864 357899999999999999999999999999999998876533 33
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++.+ +.+.+++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+
T Consensus 124 ~-Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~---dl~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 124 F-GIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQ---DVPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred c-ceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHH---HHHHHHHHHHHcCCEEEEECCcc
Confidence 4 8888776532 44677777754 899999999999998775 57779999999999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHHHh-cccc-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKM-SSFG-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~~~-~~~~-~~s~~~q~~ 311 (469)
..+ ... + . ..+..+++.|.+|.+ |..++..|+++.+ +.+.+.+... ...+ .+++...+.
T Consensus 187 ~p~-~~~---P-l------------~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p~~a~l 248 (394)
T PRK09028 187 SPI-NSR---P-F------------EMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSPDDVYL 248 (394)
T ss_pred ccc-cCC---c-c------------ccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 421 111 1 1 225679999999999 5556778877654 4333323222 2222 366776666
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+-|+. +.-+.++..++...+.+.|+++
T Consensus 249 ~~rgl~T-------L~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 249 AMRGLRT-------LGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred HHcccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 6666555 4556667777888899999987
No 213
>PLN02651 cysteine desulfurase
Probab=99.87 E-value=7.7e-20 Score=182.99 Aligned_cols=280 Identities=16% Similarity=0.164 Sum_probs=188.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcChHHH---HhhhCCCEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL----AEPGEAFLLPTPYYPGFDRD---LKWRTGVEI 160 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~ 160 (469)
+.++|+.++++++ .++++|++|+|+++++..++..+ .++||.|++....|+.+... +... |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~-g~~v 115 (364)
T PLN02651 45 VEKARAQVAALIG--------ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQE-GFEV 115 (364)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhc-CCEE
Confidence 4566777777775 56889999999999988776654 47899999998777665433 3344 8999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+.++.+. ++.+|++++++++++ +++++++++++||||.+.+.+ +|.++|+++|+++++|.+++ .+.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~l~---~I~~~~~~~g~~~~vD~a~~---~g~ 181 (364)
T PLN02651 116 TYLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQPVE---EIGELCREKKVLFHTDAAQA---VGK 181 (364)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceecccHH---HHHHHHHHcCCEEEEEcchh---hCC
Confidence 9998863 456899999999865 789999999999999999855 58889999999999999997 332
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--------hcccccCcHHHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--------MSSFGLVSSQTQYLL 312 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--------~~~~~~~s~~~q~~~ 312 (469)
.+ ..+. ..+..+++.|..|.+| ...+|+++..++........ ....++.+.....++
T Consensus 182 ~~-~~~~------------~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l 246 (364)
T PLN02651 182 IP-VDVD------------DLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGL 246 (364)
T ss_pred cc-cCcc------------cCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHH
Confidence 21 1211 2255778889999644 34588988765432111000 011234555555555
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-CCceecCC-----ceEEEEEecccccccCChhHHHHHHHHHHH
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A-GISCLKSN-----AGLFCWVDMRHLLRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-g~~v~~~~-----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~ 385 (469)
.++|+-. .+..+..+++.++..+++.+.|++ + |+++..+. ....+.+.+++. +..++...| .
T Consensus 247 ~~al~~~---~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~L-~ 315 (364)
T PLN02651 247 GAACELA---MKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV-------EGESLLMGL-K 315 (364)
T ss_pred HHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC-------CHHHHHHHh-C
Confidence 5554322 223456667778888888888875 3 77776541 122455555521 122445544 3
Q ss_pred hCCeEEeCCCCCCCC-----------------CCCeEEEEeecC-CHHHHH
Q 043923 386 DVKLNISPGSSCHCT-----------------EPGWFRVCFANM-SEDTLK 418 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~-----------------~~~~iRi~~~~~-~~e~i~ 418 (469)
+ |.++.|..+... ..+.+|+|++.. |++|++
T Consensus 316 ~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 316 E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 3 999988876443 136899999874 777764
No 214
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.9e-19 Score=182.55 Aligned_cols=157 Identities=18% Similarity=0.264 Sum_probs=126.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~ 162 (469)
....|.+.+|++.+ .+..++++|+++|+..++.+++++||+|+++.+.|++... .+... |++++.
T Consensus 65 ~~~~Le~~lA~leg----------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~-Gv~v~~ 133 (431)
T PRK08248 65 TTDVFEKRIAALEG----------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKL-GITVKF 133 (431)
T ss_pred hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhC-CEEEEE
Confidence 35788888888875 4567889999999999999999999999999999876433 34445 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.. |++++++++++ ++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|+.. + .
T Consensus 134 vd~~-------d~e~l~~ai~~------~tklV~l~sp~NPtG~v~di~---~I~~la~~~gi~vIvD~t~a~~-~---~ 193 (431)
T PRK08248 134 VDPS-------DPENFEAAITD------KTKALFAETIGNPKGDVLDIE---AVAAIAHEHGIPLIVDNTFASP-Y---L 193 (431)
T ss_pred ECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEeCCCCcc-c---c
Confidence 8752 77888888864 789999999999999999955 5888899999999999998621 1 1
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEec
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN 287 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~ 287 (469)
..+ + ..+..+++.|++|.+|.+|.++|++++.
T Consensus 194 ~~p---l----------~~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 194 LRP---I----------EHGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred CCh---h----------HcCCCEEEEcCccccCCCCCceEEEEEe
Confidence 111 1 1256788899999999999999998773
No 215
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.86 E-value=1.4e-19 Score=174.70 Aligned_cols=302 Identities=17% Similarity=0.210 Sum_probs=216.4
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh--c----CCCCEEEEccCCCcChHHHHhhh--CCC
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL--A----EPGEAFLLPTPYYPGFDRDLKWR--TGV 158 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--~----~~gd~Vl~~~P~y~~~~~~~~~~--~g~ 158 (469)
-.++.|+.||+.++ +++++|++|+|+||+.++++... . ..|..|++..-.|+.....++.. .|.
T Consensus 45 ~ve~AR~~iA~llg--------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~ 116 (386)
T COG1104 45 AVEEAREQIAKLLG--------ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGF 116 (386)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence 35677888998886 68899999999999999998872 2 24789999999999888776653 499
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+|-++|.+.++ .+|+++|+++|++ ++.+|.+..-||-||.+.|.++ |.++|+++++++++|.+.+ +
T Consensus 117 ~Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQpI~e---i~~i~k~~~i~fHvDAvQa---~ 182 (386)
T COG1104 117 EVTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGTIQPIAE---IGEICKERGILFHVDAVQA---V 182 (386)
T ss_pred eEEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeeecccHHH---HHHHHHHcCCeEEEehhhh---c
Confidence 99999998643 6899999999986 8889999999999999999665 8899999999999999997 5
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-HHH-----HhcccccCcHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-AAT-----KMSSFGLVSSQTQYLL 312 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~-~~~-----~~~~~~~~s~~~q~~~ 312 (469)
+.-+ ..+..+ ...+...|-+|..|..| +|+++..+..-.. .+. +-.-.++.+.+...+.
T Consensus 183 Gkip-i~~~~~------------~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~ 247 (386)
T COG1104 183 GKIP-IDLEEL------------GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGF 247 (386)
T ss_pred Ccee-cccccc------------CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHH
Confidence 5432 222221 34455668899999777 8888764322111 110 0011233455555554
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceecCC---ceEEEEEecccccccCChhHHHHHHHHHHHhC
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~ 387 (469)
..+++.. .+.++....++...|++|.+.|.+. ++.+.+.. -...+.+.++... .+.....|..+
T Consensus 248 ~~A~~~a---~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~--------gE~ll~~L~~~ 316 (386)
T COG1104 248 GKAAEIA---VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE--------GESLLLALDLA 316 (386)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc--------HHHHHHhcccc
Confidence 4444432 3445667777888889999999875 33333221 2234555565421 13445566778
Q ss_pred CeEEeCCCCCCCCC-----------------CCeEEEEeecC-CHHHHHHHHHHHHHHHHhhccccc
Q 043923 388 KLNISPGSSCHCTE-----------------PGWFRVCFANM-SEDTLKLSMQRLKAFVDSITTTLH 436 (469)
Q Consensus 388 GI~v~pg~~f~~~~-----------------~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~~~~~~ 436 (469)
||.+..|+.|.... .+.+|+|++.. +++|++.+++.|+++++++++.+.
T Consensus 317 gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~ 383 (386)
T COG1104 317 GIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSP 383 (386)
T ss_pred CeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999887521 35799999984 899999999999999999887443
No 216
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=4.1e-19 Score=177.78 Aligned_cols=281 Identities=15% Similarity=0.176 Sum_probs=186.5
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v 163 (469)
..+|++.++++++ .++++++++++.|+..++. ++++||.|+++.+.|.++... +... |++++.+
T Consensus 49 ~~~le~~la~l~g----------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~-G~~v~~v 116 (378)
T TIGR01329 49 RTALESLLAKLDK----------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRS-GVVVVHV 116 (378)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHc-CcEEEEe
Confidence 4667777777664 2566777777789988776 779999999999999877543 3334 9999988
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..... .
T Consensus 117 d~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~----~ 176 (378)
T TIGR01329 117 DTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL----C 176 (378)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 753 67889888864 8999999999999999997 66689999999999999999853211 1
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCC-CcceEEEEEecCHHHHHHHHHhcc-cc-cCcHHHHHHHHHHhcCch
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAATKMSS-FG-LVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~~ 320 (469)
.++ .+ +..+++.|++|.++- .+++.|+++++++.+.+.+..... .+ ..++...+.+..-++.
T Consensus 177 ~~l-~~------------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-- 241 (378)
T TIGR01329 177 NPL-EL------------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-- 241 (378)
T ss_pred Chh-hc------------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC--
Confidence 111 11 345888999998853 357899999866666554444333 22 2444444333333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ceec----------------CCceEEEEEecccccccCChhHHHHHHHH
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA-GI-SCLK----------------SNAGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~~----------------~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
+..+.++..++...+.+.|+++ .+ .|.- ...|..+.+.+.+ .....+++..
T Consensus 242 -----l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~------~~~~~~~~~~ 310 (378)
T TIGR01329 242 -----LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS------VALSKRLVEA 310 (378)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC------HHHHHHHHHh
Confidence 3445555566667777777765 22 1111 1123455566632 1223345555
Q ss_pred HHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 383 IVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
| +..+|.++.|..... -.++.+|+|++. |+.+.+++.|++++++
T Consensus 311 L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 311 T-KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred C-cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 4 667777777654321 014689999995 6677888888888874
No 217
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.9e-19 Score=178.71 Aligned_cols=216 Identities=19% Similarity=0.244 Sum_probs=149.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~ 154 (469)
+.+|+.+ ...+|++.+|++.+ . ...+++.+| +.++..++ .++++||+|+++.|.|.+.... +..
T Consensus 44 y~r~~~p-~~~~Le~~lA~l~g--------~-~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~ 111 (377)
T PRK07671 44 YSRTGNP-TRAALEELIAVLEG--------G-HAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNR 111 (377)
T ss_pred cCCCCCh-HHHHHHHHHHHHhC--------C-CceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhc
Confidence 3445544 35889999999885 2 344665555 56777665 5779999999999999854332 333
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.
T Consensus 112 ~-G~~v~~v~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~ 174 (377)
T PRK07671 112 F-GIEHTFVDT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFM 174 (377)
T ss_pred C-CeEEEEECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCC
Confidence 4 899888864 278889988865 8899999999999999877 5557888889999999999997
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~ 311 (469)
...+. . + ..+ +..+++.|+||.+|-++ .-.|++++.++.+.+.+...+.. ...++...+.
T Consensus 175 ~~~~~-~---p-~~~------------g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l 237 (377)
T PRK07671 175 TPYWQ-S---P-ISL------------GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWL 237 (377)
T ss_pred ccccC-C---h-hhh------------CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 53232 1 1 111 34688999999997443 45677777666665555544443 2244544444
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+-++. +..+.++..++...+.+.|+++
T Consensus 238 ~~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 238 LLRGLKT-------LGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred HHcCcCh-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 3333222 4556677778888899999876
No 218
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=2.6e-19 Score=180.21 Aligned_cols=288 Identities=18% Similarity=0.168 Sum_probs=192.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~ 162 (469)
....|++.+|++.+ .+..+.+++++.|+.+++.+++++||.|+++.++|.+.... +... |+++..
T Consensus 62 tv~~lE~~la~leg----------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~-Gi~v~~ 130 (432)
T PRK06702 62 TLAAFEQKLAELEG----------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKL-GIDVTF 130 (432)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHC-CCEEEE
Confidence 35888999999875 34578899999999999999999999999999999866554 4555 999988
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+.. .+|+++++++|++ ++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|...++
T Consensus 131 vd~------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~---- 191 (432)
T PRK06702 131 FNP------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL---- 191 (432)
T ss_pred ECC------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh----
Confidence 853 3588999999876 8999999999999999998 56688899999999999999852111
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCcc-----ccCCCcceE-----EEEEecCHHHH--------------------
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSK-----DLGLPGFRV-----GAIYSNDDMVV-------------------- 292 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK-----~~g~~GlRi-----G~li~~~~~~~-------------------- 292 (469)
.... ..+-.|++.|+|| ..+++|+++ +|..++...+.
T Consensus 192 -~~pl------------~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 258 (432)
T PRK06702 192 -CQAF------------EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAY 258 (432)
T ss_pred -CChh------------hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhH
Confidence 1111 2255689999999 777888887 56554322211
Q ss_pred ---HHHHHhcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC------------
Q 043923 293 ---AAATKMSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS------------ 354 (469)
Q Consensus 293 ---~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~------------ 354 (469)
........++ .++++..+.+...|+.. ..+.++..++...+.+.|+++ .+. |..|
T Consensus 259 ~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl-------~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~ 331 (432)
T PRK06702 259 IVKARVQLLRDYGNCMSPFNAYISNIGLETL-------HLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQ 331 (432)
T ss_pred HHHHHHHHHHHccCCCCHHHHHHHHhccCcH-------HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHH
Confidence 1111222333 46777777777777653 334444567888888999877 332 1111
Q ss_pred ----C-ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe----------CCCCCCC-----------CCCCeEEEE
Q 043923 355 ----N-AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS----------PGSSCHC-----------TEPGWFRVC 408 (469)
Q Consensus 355 ----~-~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~----------pg~~f~~-----------~~~~~iRi~ 408 (469)
. .|-.+.+.+++. .+....++..+ +-..+.+. |.+.-+. -.++.||+|
T Consensus 332 ~~~~~g~gg~~sf~l~~~-----~~~~~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlS 405 (432)
T PRK06702 332 KYLKKGASGVLTFGIKGG-----LEAAKEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLS 405 (432)
T ss_pred HhCcCCCceEEEEEecCC-----HHHHHHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 1 233556666521 11122222222 11111111 2211100 124689999
Q ss_pred eecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 409 FANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 409 ~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++. |+.+.+++-|.++++.-++
T Consensus 406 vGl---Ed~eDLi~Dl~~Al~~~~~ 427 (432)
T PRK06702 406 VGI---EDVSDIIADLEAALVGGKQ 427 (432)
T ss_pred ecc---CCHHHHHHHHHHHHhcCcc
Confidence 995 6788889999999986655
No 219
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=8.8e-19 Score=174.87 Aligned_cols=283 Identities=15% Similarity=0.118 Sum_probs=184.5
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v 163 (469)
...|++++|++.+ .+++++++|+++|+..++.+++++||.|++++|.|.+.... +... |+++..+
T Consensus 52 ~~~lE~~lA~l~g----------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~-gi~v~~~ 120 (377)
T TIGR01324 52 HFALQDAMCELEG----------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM-GVDITYY 120 (377)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc-CcEEEEE
Confidence 4799999999875 46789999999999999999999999999999999876543 2344 8887766
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.. +.+.+++++++ ++++|++++|+||+|...+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 121 d~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~-~-- 181 (377)
T TIGR01324 121 DPL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF-K-- 181 (377)
T ss_pred CCC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc-C--
Confidence 432 22677777654 8999999999999987754 777999999999999999999843221 1
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhcccc-cCcHHHHHHHHHHhcCchh
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSFG-LVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~ 321 (469)
+ + ..+..++++|++|.+| .+++..|+++++++.+.........++ ..++...+.+.+.++.
T Consensus 182 -p---l----------~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t--- 244 (377)
T TIGR01324 182 -P---L----------EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRT--- 244 (377)
T ss_pred -c---c----------ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh---
Confidence 1 1 2256789999999996 345788998886554433332223333 2455444444444432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ceecC----------------CceEEEEEecccccccCChhHHHHHHHHH
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKA-GI-SCLKS----------------NAGLFCWVDMRHLLRSNTFEAEMELWKKI 383 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l~~~l 383 (469)
+..+.++..++...+.+.|+++ .+ +|.-| ..|-.+.+.+++. ..+....++..
T Consensus 245 ----l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~----~~~~~~~~~~~- 315 (377)
T TIGR01324 245 ----LGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL----TQKQVHAFLDH- 315 (377)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC----CHHHHHHHHHh-
Confidence 4445666666777788888876 22 22211 1233455666421 11222233333
Q ss_pred HHhCCeEEeCCCCCCC-----------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 384 VYDVKLNISPGSSCHC-----------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 384 l~~~GI~v~pg~~f~~-----------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++-.++.+.-|..... ..++.+|+|++. |+.+.+++.|.++++
T Consensus 316 l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 316 LQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFE 375 (377)
T ss_pred CCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHh
Confidence 3333444433332110 013579999995 566777777777775
No 220
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.85 E-value=1e-18 Score=177.79 Aligned_cols=292 Identities=11% Similarity=0.048 Sum_probs=171.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccC--C------
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTS--L------ 168 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~--~------ 168 (469)
+.+++++++++|++.+++... .....|+....+|++....+....+- .+..+|... .
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 689999999999999987653 23356888888887764332221111 112222210 0
Q ss_pred -CCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 169 -NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 169 -~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
..+.-+++.+++.+... ....++.+|++.--..-+|..++ .+.+++|.++|++||+++|+||+|.++.+.+. ..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~ 252 (420)
T TIGR00700 175 QLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFAC 252 (420)
T ss_pred chhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHH
Confidence 00111134555544210 11236676666533556788665 44599999999999999999999998644442 1121
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhc---Cchh
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLS---DKKF 321 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~---~~~~ 321 (469)
... . ..+. +.++||+++ +|+|+||++++++ +.+.+.. ....+..+++++.++.+.|+ +..+
T Consensus 253 ~~~-~--------~~pD---i~~lsK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~ 318 (420)
T TIGR00700 253 EHE-G--------PEPD---LITTAKSLA-DGLPLSGVTGRAE-IMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGL 318 (420)
T ss_pred hhc-C--------CCCC---EEEeecccc-CCcceEEEEecHH-HHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence 111 1 1122 346999999 9999999999644 4444321 11223367888888766553 3333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCCceEEEEEeccccccc-CChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~-~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
.+.+.+..++++++ +.+...+++ +....+. |.++|+.+...... ........+...+ .++||.+.|+..|+
T Consensus 319 -~~~~~~~g~~l~~~---L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~- 391 (420)
T TIGR00700 319 -IERARQIGRLVTDR---LTTLKAVDPRIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG- 391 (420)
T ss_pred -HHHHHHHHHHHHHH---HHHHHhhCCCEEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC-
Confidence 33344444443333 332223333 2233344 68888877421100 0111223344444 46799999987763
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 400 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 400 ~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
+++|++++. ++++++++++++|.+++.
T Consensus 392 ---~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 392 ---NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred ---CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 589999876 599999999999999874
No 221
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1e-18 Score=177.08 Aligned_cols=163 Identities=19% Similarity=0.226 Sum_probs=125.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh---CC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR---TG 157 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~---~g 157 (469)
+++.+ ...+|++++|++.+ .+..++++++++|+..++.+++++||.|+++.+.|......+... .|
T Consensus 54 r~~~p-t~~~Le~~lA~l~g----------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~g 122 (425)
T PRK06084 54 RIMNP-TNDVLEQRVAALEG----------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIG 122 (425)
T ss_pred CCCCc-hHHHHHHHHHHHhC----------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccce
Confidence 34433 35789999999875 335567788889999999999999999999999998655544321 26
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
+++..++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+...
T Consensus 123 i~v~~~d~-------~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~ 186 (425)
T PRK06084 123 IETRFAAH-------DDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPV 186 (425)
T ss_pred eEEEEECC-------CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 66665543 378999998875 7899999999999999998 4668888999999999999997432
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEec
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN 287 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~ 287 (469)
. . .... .+..+++.|++|.+|.+|.++|.+++.
T Consensus 187 ~-~----~p~~------------~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 187 L-C----RPFE------------HGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred c-C----Chhh------------cCCCEEEECchhcccccccceeEEEEe
Confidence 1 1 1111 245588999999998899999987764
No 222
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.85 E-value=1.3e-18 Score=172.56 Aligned_cols=323 Identities=16% Similarity=0.161 Sum_probs=218.1
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-HhhhCCCE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-LKWRTGVE 159 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-~~~~~g~~ 159 (469)
.|.....+.+|+++++++++ .+.++.+++++.|+.++....++|||.| +.++|...... +... |..
T Consensus 66 ~yag~~s~~~lE~~va~~~G----------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~-Gav 132 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG----------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKN-GAT 132 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhC-CeE
Confidence 58888889999999999986 5679999999999998877778999976 66777544444 5555 887
Q ss_pred EEEeecc--------CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCC-CCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 160 IVPIQCT--------SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNP-LGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 160 ~~~v~~~--------~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NP-tG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
++.++.+ ....+.+|+++++++|++. ...++++|.+.+++|- .|.++|.++++++.++|++||+.||+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~--~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV--GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 7777543 1345678999999999742 1124567888999885 589999999999999999999999999
Q ss_pred ccccc--ccc-----CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC-cceEEEEEecCHHHHHHHHHhc---
Q 043923 231 EIYSG--TVF-----SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDDMVVAAATKMS--- 299 (469)
Q Consensus 231 eay~~--~~~-----~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~~~~~~~~~~~--- 299 (469)
.+... -+| .+....++.++..++ ...-..+..|..|.++.+ | |+++..++.+.+..+...
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~------~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~ 281 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEM------MSYADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVF 281 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHH------hccCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhc
Confidence 99862 111 011123453433322 112234677899988766 4 666656777665554432
Q ss_pred ----ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccc---cccCC
Q 043923 300 ----SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL---LRSNT 372 (469)
Q Consensus 300 ----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~---~~~~~ 372 (469)
+++..+.....+++..|.+.-. ..+.+.+. ...++|.+.|.+.|+++..|.+|.-++++.... +....
T Consensus 282 eG~~tyGgla~r~~~ala~gL~e~~~-~~y~~~r~----~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~ 356 (450)
T TIGR02618 282 EGMPSYGGLAGRDMEAMAIGIREAVD-YEYIEHRV----KQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQ 356 (450)
T ss_pred CCccccCchhhhhHHHHHHHHHHhhh-HHHHHHHH----HHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhh
Confidence 2222333333333333433211 12222222 235778899999999998888889999988754 22222
Q ss_pred hhHHHHHHHHHHHhCCeEEe-CCCC-CCCC-------C--CCeEEEEeec-C-CHHHHHHHHHHHHHHHHhhcc
Q 043923 373 FEAEMELWKKIVYDVKLNIS-PGSS-CHCT-------E--PGWFRVCFAN-M-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 373 ~~~~~~l~~~ll~~~GI~v~-pg~~-f~~~-------~--~~~iRi~~~~-~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.....++.+|..+.||.-. -|+. ++.+ . -..+|+++.. + |.+.++...++|..+.++...
T Consensus 357 -~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 357 -FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred -ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 3456788888889999543 2332 1111 0 2479999976 3 999999999999998876554
No 223
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.85 E-value=2.7e-18 Score=173.57 Aligned_cols=330 Identities=17% Similarity=0.123 Sum_probs=198.1
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ .+.+. .|.+.+++.+..+.. ......|+ .....+|.+.++++. ..
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~---------~~~~~~~~-~~~~~~la~~L~~~~----------~~ 92 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKL---------WHIGNGYT-NEPVLRLAKKLVDAT----------FA 92 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc---------ccccCccC-CHHHHHHHHHHHhhC----------CC
Confidence 44568999775 44443 466666665531110 00001121 111234444444432 24
Q ss_pred CcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCCc
Q 043923 112 SKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNGF 171 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~~ 171 (469)
+.+++++++++|+..+++... ...+.|+..+-.|++.........+.. +..+|.
T Consensus 93 ~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 166 (397)
T TIGR03246 93 DKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY------ 166 (397)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC------
Confidence 689999999999999998762 123567777777766533222211321 122222
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
.|++.+++.+.+ ++++|++..++++.|... +.+.+++|.++|++||+++|+||+|.++...+.. .....+
T Consensus 167 -~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~-~a~~~~- 237 (397)
T TIGR03246 167 -NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGEL-YAYMHY- 237 (397)
T ss_pred -CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccc-hhhhhc-
Confidence 278888888753 677777774455556543 8999999999999999999999999774322221 111111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 328 (469)
. .... + .++||.+| .|+++||+++++ .+.+.+..... ....+++++.++.+.|+... ...
T Consensus 238 g--------v~pD-i--~t~~K~lg-gG~pigav~~~~-~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~-----~~~ 299 (397)
T TIGR03246 238 G--------VTPD-I--LTSAKALG-GGFPIGAMLTTT-EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN-----TPE 299 (397)
T ss_pred C--------CCCC-E--EEeehhhh-CCcceeEEEEcH-HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh-----hcc
Confidence 0 1122 2 28999998 899999999954 45554433211 12256677777767665321 133
Q ss_pred HHHHHHHHHHHHHHHHHhcC--Cc---eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 329 NKKRLKQRHRKLVSGLEKAG--IS---CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~g--~~---v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
..+.++++.+++.+.|++++ .. ...+. |.++.+.+..... .....++..++ ++||.+.+. +++
T Consensus 300 l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~----~~~~~~~~~l~-~~Gv~~~~~------g~~ 367 (397)
T TIGR03246 300 LLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGAVLTEAYQ----GKAKQFVNAAA-EEGVIALIA------GPN 367 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEEEEcCchh----hHHHHHHHHHH-HCCeEEeec------CCC
Confidence 45667777777888777653 11 12223 4555565542110 12345666655 569998763 246
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
++|++++. ++++++++++++|.+++++
T Consensus 368 ~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 368 VVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 89997765 5999999999999998865
No 224
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=3.5e-20 Score=179.69 Aligned_cols=167 Identities=18% Similarity=0.241 Sum_probs=131.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
-+.++++.+|++++ ..+.+++++|+++++..++.+++++||.|+++.|+|..+...+... |++++.++.+
T Consensus 60 ~i~~~~~~~A~~~g---------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~-g~~~~~v~~~ 129 (294)
T cd00615 60 PIKEAQELAARAFG---------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLS-GAVPVYLKPE 129 (294)
T ss_pred HHHHHHHHHHHHhC---------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHC-CCEEEEecCc
Confidence 47889999999986 2345556999999999999999999999999999999988888877 9999998876
Q ss_pred CCCCc----ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-ccCCC
Q 043923 167 SLNGF----QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VFSSP 241 (469)
Q Consensus 167 ~~~~~----~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~~~~ 241 (469)
.+.+| .+|++++++++++ .++++++++++| ||+|.+++ +++|+++|+++|+++|+||+|+.. .|.+.
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~ 201 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPI 201 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcc
Confidence 44433 6899999998864 237899999999 79999998 556899999999999999999743 23222
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEE
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIY 285 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li 285 (469)
...+. . ..+.++++.|++|++ +|++.|+++
T Consensus 202 ~~~~~--~----------~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 202 LPSSA--A----------MAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred cCcch--h----------hcCCcEEEEchhccc--chHhHHHHH
Confidence 11111 1 236789999999985 777765554
No 225
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.84 E-value=6.1e-19 Score=175.68 Aligned_cols=285 Identities=15% Similarity=0.187 Sum_probs=187.2
Q ss_pred CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 85 YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 85 ~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
.....+++++++++++ .+++++++|+++|+..++.++ .++||+|+++.++|..+...+... |++++.+
T Consensus 17 ~~~~~~~~~~la~~~~----------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~ 85 (352)
T cd00616 17 GPKVREFEKAFAEYLG----------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLL-GATPVFV 85 (352)
T ss_pred CHHHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCeEEEE
Confidence 3457899999999985 346788889999999999998 589999999999999988888877 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCC
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPG 242 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~ 242 (469)
+++. .++.+|++.+++.+++ ++++|+++ ||+|...+. ++|.++|+++|+++|+|++++... +.+.
T Consensus 86 ~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~~---~~i~~l~~~~~i~li~D~a~~~g~~~~~~- 151 (352)
T cd00616 86 DIDP-DTYNIDPELIEAAITP------RTKAIIPV---HLYGNPADM---DAIMAIAKRHGLPVIEDAAQALGATYKGR- 151 (352)
T ss_pred ecCC-CcCCcCHHHHHHhcCc------CCeEEEEE---CCCCCcCCH---HHHHHHHHHcCCeEEEECCCCCCCeECCE-
Confidence 9874 3678899999988754 78888876 478988774 557888889999999999997321 1111
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCc--cccCCCcceEEEEEecCHHHHHHHHHhcccc-----------------c
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLS--KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-----------------L 303 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~-----------------~ 303 (469)
. + . . ...+.+.|++ |.++ +-+.|+++++++.+.+.+......+ .
T Consensus 152 --~---~-~--------~-~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T cd00616 152 --K---V-G--------T-FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYR 214 (352)
T ss_pred --E---c-c--------c-CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccC
Confidence 0 0 0 1 1224555665 9884 3356888887655554443322111 0
Q ss_pred CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC-----ceEEEEEecccccccCChhHHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN-----AGLFCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~-----~g~~~~v~~~~~~~~~~~~~~~ 377 (469)
.+.+...++... ...+++..++.+++.+++.+.|.++ |+++..+. ....+.+.++.. .. .+..
T Consensus 215 ~~~~~aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~ 283 (352)
T cd00616 215 LSEIQAAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE-AG---ESRD 283 (352)
T ss_pred cCHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc-CC---CCHH
Confidence 112211111111 1224555566677788888888886 77765332 123444445421 00 1223
Q ss_pred HHHHHHHHhCCeEEeCCCCCCCC----------------C-------CCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHCT----------------E-------PGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~~----------------~-------~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
++.+.| +++||.+... +.+. . .+.+|+++.. .++++++.++++|+
T Consensus 284 ~v~~~L-~~~gI~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 284 ELIEAL-KEAGIETRVH--YPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHH-HHCCCCeeee--cCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 455554 5669966521 1110 0 2579999976 59999999998874
No 226
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=1.8e-18 Score=173.87 Aligned_cols=209 Identities=16% Similarity=0.182 Sum_probs=148.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~ 164 (469)
...|++++|++.+ .+..+++++++.|+..++.+++++||.|+++++.|+.+.. .+... |++++.++
T Consensus 49 ~~~lE~~la~leg----------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~-G~~v~~v~ 117 (397)
T PRK05939 49 TAALEAKITKMEG----------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGL-GVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhc-CCEEEEEC
Confidence 3488999998875 2234555556899999999999999999999999986543 34455 99999887
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.. |++++++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+.... .
T Consensus 118 ~~-------d~e~l~~~l~~------~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~t~a~~~~-----~ 176 (397)
T PRK05939 118 AT-------DVQNVAAAIRP------NTRMVFVETIANPGTQVA---DLAGIGALCRERGLLYVVDNTMTSPWL-----F 176 (397)
T ss_pred CC-------CHHHHHHhCCC------CCeEEEEECCCCCCCCHH---hHHHHHHHHHHcCCEEEEECCcccccc-----c
Confidence 53 67889988864 899999999999999985 477799999999999999999863210 0
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH----------------------HHHHHHH-hccc
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM----------------------VVAAATK-MSSF 301 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~----------------------~~~~~~~-~~~~ 301 (469)
... ..+..+++.|+||.++..|.++|++++++.. +.+.... ....
T Consensus 177 ~~~------------~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (397)
T PRK05939 177 RPK------------DVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDM 244 (397)
T ss_pred Ccc------------ccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhc
Confidence 100 2256789999999999889999998874221 1111111 1122
Q ss_pred c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 302 G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 302 ~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+ .+++...+.+.+-++. +..+.++..++...+.+.|+.+
T Consensus 245 G~~~~p~~a~l~~rgl~t-------l~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 245 GATLSSEAAHRIAIGAET-------LALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred CCCCCHHHHHHHHcCcCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2445444444444433 3445555666778888999877
No 227
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=2.1e-18 Score=175.23 Aligned_cols=218 Identities=14% Similarity=0.175 Sum_probs=150.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhhh
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWR 155 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~ 155 (469)
..|... |. +.++++.+.+.+..+ .+..++++|+++++.+++ .++++||.|+++.|.|..+... +...
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~leg------~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLDK------ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHhC------CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHC
Confidence 346654 53 357777777765533 566777788889987665 5789999999999999987633 3344
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|++++.++. .|++++++++++ ++++|++++|+||||.+ .++++|+++|++||+++|+|++|+.
T Consensus 196 -G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~ 258 (464)
T PLN02509 196 -GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMS 258 (464)
T ss_pred -CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 998888763 267888888754 78999999999999996 4577799999999999999999874
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~~ 312 (469)
.++. . . + ..+..+++.|++|.++-+| +-.|++++.++.+.+.+..++.. + ..++...+++
T Consensus 259 ~~~~-~---p---l----------~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~ 321 (464)
T PLN02509 259 PVLS-R---P---L----------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_pred cccC-C---h---h----------hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHH
Confidence 3221 1 1 1 1145688899999987433 44677776555544433322222 1 2344443333
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.+-|+ .+..+.++..++...+.+.|+++
T Consensus 322 lr~L~-------tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 322 LRGIK-------TMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred Hhhhh-------hHHHHHHHHHHHHHHHHHHHhcC
Confidence 33332 24566677777888889999876
No 228
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=5.6e-18 Score=171.81 Aligned_cols=342 Identities=13% Similarity=0.055 Sum_probs=203.2
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHH----HHHHHHHhHcCCCCCCCCCcE
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKK----ALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~----aia~~l~~~~~~~~~~~~~~i 114 (469)
..|+|-..+|.+.|.....+............ .....|+..+.+.+|.+ .++++++ .+..
T Consensus 29 ~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~------~gsr~~~G~~~~~~lE~~~~~~la~l~g----------~~~a 92 (416)
T PRK13034 29 DHLELIASENFTSPAVMEAQGSVLTNKYAEGY------PGKRYYGGCEFVDEVEALAIERAKQLFG----------CDYA 92 (416)
T ss_pred cCeeecccccCCCHHHHHHhcchhhcCCCCCC------CCCcccCCChHHHHHHHHHHHHHHHHhC----------CCce
Confidence 55888888888755443333222111100000 11122322344677777 7777775 2344
Q ss_pred -EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh-HHHHhhh-CCCEE--EEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 115 -VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF-DRDLKWR-TGVEI--VPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 115 -~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~~~~~-~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+.+++++.|+..++.+++++||.|+++...|.+. ...+... .+... +.++++. ..+.+|++++++.+...
T Consensus 93 lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~~---- 167 (416)
T PRK13034 93 NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKEH---- 167 (416)
T ss_pred EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhhc----
Confidence 4568889999999999999999999999988762 2222110 02222 2344432 24568999999887542
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|++..+. +|...+ +.+|.++|++||+++|+|++++-..+...... .. .....++++|
T Consensus 168 -~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~--~~-----------~~~~Di~~~s 228 (416)
T PRK13034 168 -KPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHP--NP-----------FPHAHVVTTT 228 (416)
T ss_pred -CCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCC--CC-----------CCCceEEEEe
Confidence 57887776654 466666 55577789999999999999974333221111 00 1135688899
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcccc--c-CcHHHHHHHH-HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG--L-VSSQTQYLLS-ALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~--~-~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
++|+++.+. -|++++.++.+...++.....+ . ..++...++. ++++.. .....+.++++.++.++|.+.|.
T Consensus 229 ~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~---~~~~~~~~~~l~~~a~~l~~~L~ 303 (416)
T PRK13034 229 THKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAL---QPEFKTYAKQVIANAQALAEVLK 303 (416)
T ss_pred CcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHh---ChhHHHHHHHHHHHHHHHHHHHH
Confidence 999994232 3788876666655544432221 1 1122222222 222211 11123456788888999999999
Q ss_pred hcCCceecC-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC----CCCCCCeEEEEeec-----CCHH
Q 043923 346 KAGISCLKS-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC----HCTEPGWFRVCFAN-----MSED 415 (469)
Q Consensus 346 ~~g~~v~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f----~~~~~~~iRi~~~~-----~~~e 415 (469)
+.|+++..+ ..+..+++.+..... ....+.+.|++.||.+.+-... .+..+..+|++++. ++++
T Consensus 304 ~~G~~~~~~~~~t~i~~v~~~~~~~------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~ 377 (416)
T PRK13034 304 ERGYDLVSGGTDNHLLLVDLRPKGL------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEA 377 (416)
T ss_pred HcCCEeccCCCCCcEEEEEcCCCCC------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHH
Confidence 889987642 234666677653211 1133445566789999742110 11125579999754 3689
Q ss_pred HHHHHHHHHHHHHHhh
Q 043923 416 TLKLSMQRLKAFVDSI 431 (469)
Q Consensus 416 ~i~~~l~~L~~~l~~~ 431 (469)
+++++++.|++++...
T Consensus 378 di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 378 EFREIANWILDVLDDL 393 (416)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999998844
No 229
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=174.77 Aligned_cols=170 Identities=17% Similarity=0.251 Sum_probs=130.4
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
...+|++++|++++ .++++.++|+++|+.+++.++ +++||+|+++.|+|..+...+... |++++.+++
T Consensus 34 ~~~~le~~la~~~g----------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~v~vd~ 102 (379)
T PRK11658 34 KNQALEQAFCQLTG----------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLL-GATPVMVDV 102 (379)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHc-CCEEEEEec
Confidence 46999999999986 246788999999999999999 799999999999999998888776 999999998
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc-cccCCCCcc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG-TVFSSPGFV 244 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~-~~~~~~~~~ 244 (469)
+. +++.+|++++++++++ ++++|+ |+||+|...+ +++|.++|+++|++||+|++|+. ..+.+..
T Consensus 103 ~~-~~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~-- 167 (379)
T PRK11658 103 DR-DTLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH-- 167 (379)
T ss_pred CC-CcCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECCee--
Confidence 75 4578899999998865 788776 6678999877 45588899999999999999972 2222211
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~ 297 (469)
+ . ..+.. +.||++.-.+++.+.|+++.+++.+.+.++.
T Consensus 168 -~----g--------~~g~~--~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~ 205 (379)
T PRK11658 168 -I----G--------ARGTA--IFSFHAIKNITCAEGGLVVTDDDELADRLRS 205 (379)
T ss_pred -c----C--------CCCCE--EEeCCCCCcCcccCceEEEECCHHHHHHHHH
Confidence 1 1 11223 4466544444666789998876666555444
No 230
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=2.7e-18 Score=171.80 Aligned_cols=216 Identities=17% Similarity=0.227 Sum_probs=144.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~ 154 (469)
+.+|+.+ ....|++.+|++.+ ....+++++| +.|+.+++ .++++||+|++++|.|.+.... +..
T Consensus 44 y~r~~~p-~~~~Le~~la~l~g---------~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~ 111 (380)
T PRK06176 44 YSRSGNP-TRFALEELIADLEG---------GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVK 111 (380)
T ss_pred ccCCCCh-hHHHHHHHHHHHhC---------CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHh
Confidence 3445544 35889999999875 2334555555 56888766 5679999999999999765432 334
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |+++..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+
T Consensus 112 ~-gi~v~~vd~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 112 N-GLSCTIIDT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred c-CeEEEEcCC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 888887764 278888888764 7899999999999999998 4458888999999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhccc-c-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSF-G-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~~-~-~~s~~~q~~ 311 (469)
..++. .+ + ..+..+++.|++|.++.+| .-.|++++.++.+.+.+...+.. + ..++...+.
T Consensus 175 ~~~~~-~p---~-------------~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l 237 (380)
T PRK06176 175 TPYYQ-NP---L-------------LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWL 237 (380)
T ss_pred ccccC-Cc---c-------------ccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 54322 11 1 1144588899999997555 45677777555555444433333 2 234444444
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+..-+.. +..+.++..++...+.+.|+++
T Consensus 238 ~~~gl~t-------l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 238 LQRGIKT-------LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHhccCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 4333322 2334444555666777777765
No 231
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.83 E-value=5.9e-18 Score=154.99 Aligned_cols=318 Identities=15% Similarity=0.231 Sum_probs=226.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE--EeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV--LTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~--~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~ 154 (469)
-+.|-|..|.+.++++.++.+-..... .+..+.++ -+-|++.|+.+....|. -+..+|.+.+|+|..+..+++.
T Consensus 67 NHEYLpi~Gl~~F~~~A~el~lg~~s~--a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~ 144 (410)
T KOG1412|consen 67 NHEYLPILGLPTFTKAATELLLGADSP--AIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEK 144 (410)
T ss_pred cchhccccCchhhhhhhHHHhcCCCch--hhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHH
Confidence 356888999999999999886322111 12334433 46677888887766552 2356799999999999999998
Q ss_pred hCC-CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q 043923 155 RTG-VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232 (469)
Q Consensus 155 ~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Dea 232 (469)
. | ..+...++=..+.-.+|++.+...|+.. |.-..+++... |||||.-.+.|+|.+|++..++.+.+.+.|-+
T Consensus 145 a-Gf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA 219 (410)
T KOG1412|consen 145 A-GFTTVATYPYWDAENKCVDLEGFLSDLESA----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA 219 (410)
T ss_pred c-CCceeeeeeeecCCCceecHHHHHHHHhhC----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh
Confidence 8 8 4566666633345568888888887753 22233444444 99999999999999999999999999999999
Q ss_pred ccccccCCCC--ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEE--EecCHHHH-HHHHHh-----cccc
Q 043923 233 YSGTVFSSPG--FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAI--YSNDDMVV-AAATKM-----SSFG 302 (469)
Q Consensus 233 y~~~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~l--i~~~~~~~-~~~~~~-----~~~~ 302 (469)
|.++.-++.. ...+..++. ....++++.||+|.||+.+-|+|.+ +..++... ....++ ..+.
T Consensus 220 YQGfASGD~~~DawAiR~fV~--------~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S 291 (410)
T KOG1412|consen 220 YQGFASGDLDADAWAIRYFVE--------QGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS 291 (410)
T ss_pred hcccccCCccccHHHHHHHHh--------cCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC
Confidence 9985333322 122333333 2245889999999999999999987 34444332 222222 2333
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHH---HHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYIS---ENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEA 375 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~---~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~ 375 (469)
.++.....++..+|..+++.++|.+ .+..++++.|..|+..|..++ |.-+..+.|+|-+-.+..
T Consensus 292 NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp--------- 362 (410)
T KOG1412|consen 292 NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP--------- 362 (410)
T ss_pred CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH---------
Confidence 4555677788899998776555543 345678888899999888874 444567778887766553
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
..++.|.+++.|.+.+ +| ||++++++...++...++|.+.++...
T Consensus 363 --~qV~~li~~h~vyLl~--------~G--RInisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 363 --AQVDHLIENHKVYLLS--------DG--RINISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred --HHHHHHHHhceEEEec--------CC--cEeeeccccccHHHHHHHHHHHHHhhc
Confidence 3467888899998874 33 999999999999999999999887654
No 232
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=1.5e-18 Score=174.21 Aligned_cols=170 Identities=19% Similarity=0.332 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (469)
.++++++++++.+.++ .+++++++|+++|+.+++.++ +++||+|+++.|+|..+...+... |++++.+++++
T Consensus 30 ~~~~~~~e~~la~~~g------~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~-G~~~v~~d~d~ 102 (375)
T PRK11706 30 GGFTRRCQQWLEQRFG------SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIRP 102 (375)
T ss_pred CHHHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc-CCEEEEEecCC
Confidence 4566777776665543 478999999999999887765 689999999999999999888877 99999999885
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~ 246 (469)
++|.+|++++++++++ ++++|+++ |++|...+ +++|.++|++||++||+|++|+... +++.. +
T Consensus 103 -~~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~---~ 166 (375)
T PRK11706 103 -DTMNIDETLIEAAITP------KTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKGRA---L 166 (375)
T ss_pred -CcCCcCHHHHHHhcCC------CCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCCee---e
Confidence 4588999999998864 78888866 46998876 5568888899999999999998542 22211 1
Q ss_pred hhhhhccccccCCcCCeEEEEccCc--cccCCCcceEEEEEecCHHHHHHHH
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLS--KDLGLPGFRVGAIYSNDDMVVAAAT 296 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~GlRiG~li~~~~~~~~~~~ 296 (469)
..+ . .+.+.||+ |.++ +|.+.+++.. ++.+.+.++
T Consensus 167 g~~------------~-~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~~~~~~~ 203 (375)
T PRK11706 167 GTI------------G-HIGCFSFHETKNYT-AGEGGALLIN-DPALIERAE 203 (375)
T ss_pred ecC------------c-CEEEEeCCCCcccc-ccCCeEEEEC-CHHHHHHHH
Confidence 111 1 12233443 9997 6888667665 455544433
No 233
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.83 E-value=1.3e-17 Score=169.43 Aligned_cols=293 Identities=12% Similarity=0.107 Sum_probs=174.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCCCccc---
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLNGFQI--- 173 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~--- 173 (469)
+.+++++++++|+..+++... ....+|+....+|++....+....|. .++.+|...+.. .+
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~ 180 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQ 180 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccc-cccHH
Confidence 589999999999999988753 22357888888887764322111121 122233221110 11
Q ss_pred -CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 174 -TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 174 -d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
+++.+++.+++. ....++.+|++.-.++|+|..+ |.+.+++|.++|++||+++|+||++.++.+.+.. .....+ .
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~-~ 257 (421)
T PRK09792 181 DSLDAIERLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHY-A 257 (421)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhc-C
Confidence 235666655421 0123677766664489999865 8999999999999999999999999986444432 222222 1
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
..++ +.+|||++| +|+|+||++++++ +.+.+... ......+++.+.++.+.++-.+. .+++++.
T Consensus 258 -------~~pD----i~t~gK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~~~~~~ 323 (421)
T PRK09792 258 -------DKPD----LMTMAKSLA-GGMPLSGVVGNAN-IMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK-ESLCERA 323 (421)
T ss_pred -------CCCc----EEEeehhhc-CCCceEEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 0222 468999998 9999999999544 44433211 11223677777755555432211 1223333
Q ss_pred HHHHHHHHHHHHHHH-HhcCCceecCCc-eEEEEEeccccccc-CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEE
Q 043923 330 KKRLKQRHRKLVSGL-EKAGISCLKSNA-GLFCWVDMRHLLRS-NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 406 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L-~~~g~~v~~~~~-g~~~~v~~~~~~~~-~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iR 406 (469)
+ .+.++.....+.| ++++. +....+ |+++|+.+++.... ........++..++ ++||.+.+... ..+.+|
T Consensus 324 ~-~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g~----~~~~ir 396 (421)
T PRK09792 324 N-QLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCGA----YGNVIR 396 (421)
T ss_pred H-HHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecCC----CCCEEE
Confidence 3 2222222222222 23343 333445 89999999743111 01122334555555 56999964221 246899
Q ss_pred EEeec-CCHHHHHHHHHHHHHHHH
Q 043923 407 VCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 407 i~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
+.++. ++++++++++++|.++++
T Consensus 397 l~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 397 FLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99887 699999999999999875
No 234
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.83 E-value=4.1e-18 Score=172.71 Aligned_cols=291 Identities=16% Similarity=0.126 Sum_probs=184.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----------CCCCEEEEccCCCcCh-HHHHhhhC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----------EPGEAFLLPTPYYPGF-DRDLKWRT 156 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----------~~gd~Vl~~~P~y~~~-~~~~~~~~ 156 (469)
+.+|.+.++++++ .+.+++++++++|+..++..+. ...+.|+...-.|.+. ...+...
T Consensus 81 ~~~l~~~l~~~~~----------~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~- 149 (401)
T TIGR01885 81 FGEFAEYVTKLFG----------YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMS- 149 (401)
T ss_pred HHHHHHHHHhhcC----------CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCc-
Confidence 4566666666542 3688999999999999998752 2246777777777653 3333322
Q ss_pred CC------------EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCH-HHHHHHHHHHHhc
Q 043923 157 GV------------EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSR-NELNLLVNIITEK 223 (469)
Q Consensus 157 g~------------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~-e~l~~l~~~~~~~ 223 (469)
+- .++.++. .|++.+++.+++. +.++.+|++..+++++|...+. +.+++|.++|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~ 219 (401)
T TIGR01885 150 TDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH 219 (401)
T ss_pred CCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 21 1223332 1678888888642 2367777777779999998864 4699999999999
Q ss_pred CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-hcc-c
Q 043923 224 NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-MSS-F 301 (469)
Q Consensus 224 ~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~~~-~ 301 (469)
|+++|+||+|.++.+.+.. .+. +... ..+.++ ++||.++..++|+|++++++ .+.+.+.. ... .
T Consensus 220 ~~lli~DEv~~g~g~~G~~-~~~-~~~~--------~~~di~---~~gK~l~~g~~~ig~v~~~~-~i~~~~~~~~~~~t 285 (401)
T TIGR01885 220 NVLLIADEIQTGLGRTGKL-LCV-DHEN--------VKPDIV---LLGKALSGGVYPVSAVLADD-DVMLTIKPGEHGST 285 (401)
T ss_pred CCEEEEechhhCCCccchh-hHH-hhcC--------CCCCEE---EeeccccCCCCCcEEEEEcH-HHHhhccCCCCCCC
Confidence 9999999999874333321 111 1111 112333 47899986669999999954 44444432 111 1
Q ss_pred ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce---ecCCceEEEEEecccccccCChhHHHH
Q 043923 302 GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC---LKSNAGLFCWVDMRHLLRSNTFEAEME 378 (469)
Q Consensus 302 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v---~~~~~g~~~~v~~~~~~~~~~~~~~~~ 378 (469)
...+++.+.++.++|+... .. ...++.++..+++.+.|++++..+ ..+.+ .+..+.++.... .....+
T Consensus 286 ~~~~p~~~~aa~a~L~~i~--~~---~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g-~~~~i~~~~~~~---~~~~~~ 356 (401)
T TIGR01885 286 YGGNPLACAVAVAALEVLE--EE---KLAENAEKLGEIFRDQLKKLPKPIITEVRGRG-LLNAIVIDESKT---GRTAWD 356 (401)
T ss_pred CCCCHHHHHHHHHHHHHHH--hc---cHHHHHHHHHHHHHHHHHhccCCceeEEeecC-eeEEEEeccCcc---hhHHHH
Confidence 2346777777777765322 11 233455556688888888874332 23344 454454542110 012345
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
++.++. ++||.+.|+. ++.+|+++.. ++++++++++++|+++++
T Consensus 357 l~~~l~-~~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 357 LCLKLK-EKGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred HHHHHH-hCCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 666665 6699998752 4689999864 599999999999998763
No 235
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=1.5e-17 Score=170.52 Aligned_cols=357 Identities=12% Similarity=0.099 Sum_probs=198.6
Q ss_pred CCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
......+||+..+ ...+. .|.+.+++++..+ ............+....+|+.+.+... -
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p----~ 112 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVD-------------QYIHTGFNVMMYEPYIELAEKLAALAP----G 112 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHH-------------hccCccccccccHHHHHHHHHHHHhCC----C
Confidence 3344567888765 23343 4666666665311 111111111113445556666654321 1
Q ss_pred C-CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCC--CCc
Q 043923 110 D-TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSL--NGF 171 (469)
Q Consensus 110 ~-~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~~~ 171 (469)
. .+.+++++++++|++.+++... .....|+....+|++....+....+. .+..+|.... ...
T Consensus 113 ~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T PRK06918 113 SFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE 192 (451)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccc
Confidence 1 1589999999999999988753 23356888888887765333221121 1222222100 000
Q ss_pred ccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 172 QIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 172 ~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
... ++.+++.+.... ...++.+ ++..|.... |.++ +.+.+++|.++|++||+++|+||+|.++.+.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAa-vi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~ 270 (451)
T PRK06918 193 GLTEEQYDDFMIEEFKNFFISEV-APETIAA-VVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK 270 (451)
T ss_pred cCchHHHHHHHHHHHHHHHHhhc-CCCceEE-EEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc
Confidence 111 112333221100 1124544 555675544 6645 455599999999999999999999998655443
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhc--
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLS-- 317 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~-- 317 (469)
+.+...+ . ..+. +.|+||+++ +|+|+||++++++ +.+.+.... ..+..+++.+.++.++|+
T Consensus 271 -~~a~~~~-~--------v~pD---i~t~sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i 335 (451)
T PRK06918 271 -YFAIEHF-D--------VVPD---LITVSKSLG-AGVPISGVIGRKE-IMDESAPGELGGTYAGSPLGCAAALAVLDII 335 (451)
T ss_pred -eehhHhc-C--------CCCC---EEeeehhhc-CCCccEEEEEcHH-HHhccCCCCcCcCCCcCHHHHHHHHHHHHHH
Confidence 2232222 1 1122 348999998 9999999999544 444333221 123367788888666554
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ceecCCceEEEEEeccccc-ccCChhHHHHHHHHHHHhCCeEEeCC
Q 043923 318 -DKKFTQNYISENKKRLKQRHRKLVSGLEKAGI-SCLKSNAGLFCWVDMRHLL-RSNTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 318 -~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
+..+ .++++...+.+.++.+.+.+ ++++ ....+.|+++.|....+.. ..........+...+ .++||.+.|+
T Consensus 336 ~~~~~-~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~ 410 (451)
T PRK06918 336 EKENL-NDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSA 410 (451)
T ss_pred HHCCH-HHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeec
Confidence 3333 44444444444444333322 2322 2234567666665542210 001112223344444 5679999998
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..|+ +++|++++. ++++++++++++|.+++++...
T Consensus 411 ~~~~----~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 411 GTYG----NVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred CCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 6653 589999976 6999999999999999987643
No 236
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.83 E-value=6.9e-18 Score=170.33 Aligned_cols=340 Identities=15% Similarity=0.092 Sum_probs=202.5
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ ...+. .+.+.+++.+..+ ....++... ..+....+++.+.+... ..
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~-~~~~~~~la~~L~~~~~-----~~ 98 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAG-------------KLWHTSNVF-YSAPPLKLAEELVTASR-----FA 98 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHH-------------hcccccccc-CCHHHHHHHHHHHhhCC-----CC
Confidence 34468898765 33443 4666666665311 111111111 12334556666643321 13
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------C-CCEEEEccCCCcChHHHHhhhCCCEEEE---eeccCC---CCcccCHH
Q 043923 112 SKIVLTAGATSANETLMFCLAE--------P-GEAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSL---NGFQITET 176 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~--------~-gd~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~---~~~~~d~~ 176 (469)
+.+++++++++|++.+++.... + ..+|+....+|++....+....|..... -|.... -.| .|++
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 177 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVE 177 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHH
Confidence 6899999999999999877531 1 2468888888887654332221221110 011000 011 2678
Q ss_pred HHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC--HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS--RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s--~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
.+++.+.. +..+.++..|.+++|-+++ .+.+++|.++|++||+++|+||+|.++...+. +....
T Consensus 178 ~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~----~~a~~---- 243 (408)
T PRK04612 178 ALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT----LFAHW---- 243 (408)
T ss_pred HHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc----hhhhh----
Confidence 88877642 3445677789888887665 67899999999999999999999987533332 11111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-c-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-S-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKR 332 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 332 (469)
..+.+..+.||||++| +|+|+||++++++ +.+.+... . ..+..+++.+.++.+.|+...- ....++
T Consensus 244 -----~~~~~pdi~t~~K~l~-~G~piga~~~~~~-~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~-----~~l~~~ 311 (408)
T PRK04612 244 -----QEQVTPDIVTLAKALG-GGFPIGAMLAGPK-VAETMQFGAHGTTFGGNPLAAAVARVALRKLAS-----PQIAAN 311 (408)
T ss_pred -----hcCCCCCEEEEcchhc-CCCceEEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHH
Confidence 1244556779999998 9999999998654 44443321 1 1223678888888777754221 223344
Q ss_pred HHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEE
Q 043923 333 LKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVC 408 (469)
Q Consensus 333 l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~ 408 (469)
+++.-+++.+.|+++ ++-.....-|.++.+.+..... .....++.. +.++||.+.+. +.+.+|+.
T Consensus 312 ~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~----~~a~~i~~~-l~~~Gvlv~~~------g~~~lRl~ 380 (408)
T PRK04612 312 VARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA----GQAGAILDL-AAEHGLLLLQA------GPDVLRFV 380 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh----hHHHHHHHH-HHHCCeEEeeC------CCCEEEEc
Confidence 444445555555543 3221122235777777642100 112234444 45779999763 24679999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 409 FAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 409 ~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
... ++++++++++++|.+++++.-
T Consensus 381 Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 381 PALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHh
Confidence 876 599999999999999997643
No 237
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=2.1e-17 Score=168.40 Aligned_cols=354 Identities=16% Similarity=0.131 Sum_probs=199.7
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ .+.+. .+.+.+++.+.. .....+.......+...++|+.+.+... ..
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql-------------~~~~~~~~~~~~~~~~~~la~~L~~~~p----~~ 100 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQT-------------DKLIHYTPIYGFPVEPLLLAEKLIEIAP----GD 100 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHH-------------HhccCccccccCcHHHHHHHHHHHHhCC----CC
Confidence 344568898766 44453 466666666531 1111222111123445566666654322 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCC--Ccc--
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLN--GFQ-- 172 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~--~~~-- 172 (469)
-+.+++++++++|+..+++... .....|+...-.|++....+....|. .+..+|.+... .+.
T Consensus 101 ~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK08360 101 NPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKE 180 (443)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCc
Confidence 3689999999999999988752 23456777777777653222111121 12223322100 010
Q ss_pred ------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 173 ------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 173 ------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
.+++.+++.++.. ..+.++++|++.--+||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+.. ..
T Consensus 181 ~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~-~a 258 (443)
T PRK08360 181 PGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKW-FA 258 (443)
T ss_pred hhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccc-hh
Confidence 1123344444321 01246887766633699999887 557999999999999999999999985444432 11
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhH
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
...+ . ..+.++ ++||++| +|+|+||+++++ .+.+.+.... ..+..+++.+.++.++|+...- .
T Consensus 259 ~~~~-~--------~~pDii---tlsK~l~-~G~pigav~~~~-~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~ 323 (443)
T PRK08360 259 IEHF-G--------VEPDII---TLGKPLG-GGLPISATIGRA-EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-K 323 (443)
T ss_pred hhhc-C--------CCCCEE---Eeccccc-CCceeEEEEEcH-HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-c
Confidence 1111 1 123333 7799999 999999999954 4545443222 1223567777777777654211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEecccccc--cCChhHHHHHHHHHHHhCCeEEeCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLR--SNTFEAEMELWKKIVYDVKLNISPGSSC 397 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~ll~~~GI~v~pg~~f 397 (469)
...+.+++.-+++.+.|++ .++......-|.++.+.+..... .........+...+ .++||.+.+..
T Consensus 324 ----~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~-- 396 (443)
T PRK08360 324 ----NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRA-WELGLIVTFFS-- 396 (443)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHH-HHCCeEEeecC--
Confidence 1223333333344444433 33221122235777776642111 01111223455554 46799986431
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 398 HCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 398 ~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+.+|++.+. +++++++++++++.++++..++
T Consensus 397 ----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 397 ----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3579997776 5999999999999999987755
No 238
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=1.9e-17 Score=164.75 Aligned_cols=322 Identities=14% Similarity=0.144 Sum_probs=218.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-HhhhCCC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-LKWRTGV 158 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-~~~~~g~ 158 (469)
..|.....+.+|+++++++++ .+.++.+++++.|+.+++...+++||.| +..+|...... +... |.
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG----------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~-Ga 138 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYG----------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELN-GG 138 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHC----------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhC-Cc
Confidence 358888889999999999986 4568999999999998877778999965 44444433333 4445 88
Q ss_pred EEEEeecc--------CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 159 EIVPIQCT--------SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 159 ~~~~v~~~--------~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
.++.+..+ ....+.+|++.++++|++. ..+++++|.+.+++|.. |+..|.++++++.++|++||+.||+
T Consensus 139 ~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~--~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~ 216 (460)
T PRK13237 139 IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV--GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFF 216 (460)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEE
Confidence 66655322 1245789999999999742 12356678888899988 7999999999999999999999999
Q ss_pred eccccccccCCC----------CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc
Q 043923 230 DEIYSGTVFSSP----------GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 299 (469)
Q Consensus 230 Deay~~~~~~~~----------~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~ 299 (469)
|.+.. ++.. ...++.++..++ ..--..++.|++|.++.+ . -|+++.+++.+.+..+...
T Consensus 217 DaAra---~gna~fI~~re~~y~~~~i~ei~~e~------~s~aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~ 285 (460)
T PRK13237 217 DATRC---VENAYFIKEREEGYQDKSIKEIVHEM------FSYADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELV 285 (460)
T ss_pred ECcch---hcChhhhcccccccCCCcHhHHhhhc------cCcCcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhc
Confidence 99986 3311 112333333322 112345566899999755 1 3899998888877766542
Q ss_pred -------ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccc---cc
Q 043923 300 -------SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL---LR 369 (469)
Q Consensus 300 -------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~---~~ 369 (469)
+++..+.-...+++.-|.+... .+++..+.+ ..++|.+.|.+.|+++..|.+|.-++++.... +.
T Consensus 286 ~~~eG~~tygg~~grd~~alAvgl~E~~~-~~y~~~ri~----~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~ 360 (460)
T PRK13237 286 VVYEGMPSYGGMAGRDMEAMAIGIEESVQ-YEYIEHRVG----QVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLP 360 (460)
T ss_pred cccCCCcCCCChhhhHHHHHHhHHHhhch-HHHHHHHHH----HHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCC
Confidence 1222323233344333433221 234443333 44788999999999999999999899987653 22
Q ss_pred cCChhHHHHHHHHHHHhCCeEEe-CCCC-CCCC----C-----CCeEEEEeec-C-CHHHHHHHHHHHHHHHHhhcc
Q 043923 370 SNTFEAEMELWKKIVYDVKLNIS-PGSS-CHCT----E-----PGWFRVCFAN-M-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~~~GI~v~-pg~~-f~~~----~-----~~~iRi~~~~-~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
... .....++.+|..+.||.-. -|+. ++.+ . -..+|+++.. + |.+.++...++|..+.++...
T Consensus 361 ~~~-~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 361 QDQ-FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred ccc-ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 222 3445788888889999653 2332 1111 0 2479999966 3 999999999999998876554
No 239
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.82 E-value=7.8e-18 Score=171.47 Aligned_cols=346 Identities=15% Similarity=0.109 Sum_probs=200.5
Q ss_pred CCCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+. ..+ .++.+.+++.+..+. ....|.+..+..+|.+.+++.+. ..
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~------------~~~~~~~~~~~~~la~~L~~~~~---------~~ 106 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK------------GLSFGAPTELEVELAELVIELVP---------SI 106 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh------------CCcCCCCCHHHHHHHHHHHHhCC---------CC
Confidence 345689998774 322 456666666553211 01122333344455555554431 35
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEE----------EEeeccCCCCcc---cCHH
Q 043923 112 SKIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEI----------VPIQCTSLNGFQ---ITET 176 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~----------~~v~~~~~~~~~---~d~~ 176 (469)
+.+++++|+++|+..+++.... .++.|+..++.|+++...+....|... .+.+.. .+.+. .|++
T Consensus 107 ~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~ 185 (426)
T PRK00062 107 EMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYNDLE 185 (426)
T ss_pred CEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCCHH
Confidence 6899999999999999988532 367899999999987633221101100 000000 00000 2678
Q ss_pred HHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
.+++.+++. ..++.+|++..-...+|.+.+ .+.+++|.++|++||+++|+||+|.++.. +.. ...+...
T Consensus 186 ~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~--~~~~~~~---- 255 (426)
T PRK00062 186 AVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALG--GAQGYYG---- 255 (426)
T ss_pred HHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCc--cHHHHhC----
Confidence 888877531 235666666532344888775 88899999999999999999999987522 221 1112211
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh---cc--cccCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM---SS--FGLVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~---~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
..+. +.++||.+| .|+++|+++++ +.+.+.+... .. .+..+++.+.++.+.|+...- .+..++.+
T Consensus 256 ----~~pD---i~~~gK~l~-~G~p~ga~~~~-~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~ 325 (426)
T PRK00062 256 ----VTPD---LTTLGKIIG-GGLPVGAFGGR-REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELE 325 (426)
T ss_pred ----CCcc---hHhhhhHhh-CCCcceeeeEH-HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHH
Confidence 1112 358999998 99999999885 4455544311 11 123567777777776653221 12344444
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccc-c------cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 331 KRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLL-R------SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~-~------~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
+.....++.|.+.++++++.......|.++-+.+.... . .........++..++ ++||.+.|.. .+
T Consensus 326 ~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~------~~ 398 (426)
T PRK00062 326 ALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ------FE 398 (426)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC------cC
Confidence 44444455555555556665433223455555553210 0 001011234555555 6799998742 12
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 404 WFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 404 ~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+++++. ++++++++++++|.+++++.
T Consensus 399 ~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 399 AGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 3677654 59999999999999998753
No 240
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.82 E-value=9e-18 Score=168.54 Aligned_cols=284 Identities=19% Similarity=0.243 Sum_probs=194.5
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHH---H-hhhCCCE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRD---L-KWRTGVE 159 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~---~-~~~~g~~ 159 (469)
..+.|+.++++++ .++ ++|++++|+++++..++.++ .++||.|++..-.|++.... + +.. |++
T Consensus 45 ~~~~r~~la~~lg--------~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~-g~~ 115 (371)
T PF00266_consen 45 LEEAREALAKLLG--------APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRK-GAE 115 (371)
T ss_dssp HHHHHHHHHHHHT--------SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHT-TEE
T ss_pred HHHHHHHHHHhcC--------Cccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccc-hhh
Confidence 4577888888886 566 89999999999999999999 79999999999988776522 2 244 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
+..++.+..+ .+|+++++++|.+ ++++|+++.-+|.||..++.+ +|.++|+++|+++++|.+++ ++
T Consensus 116 v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~pi~---~I~~~~~~~~~~~~vD~~~~---~g 181 (371)
T PF00266_consen 116 VRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENSTGVRNPIE---EIAKLAHEYGALLVVDAAQS---AG 181 (371)
T ss_dssp EEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTTTBBSSHH---HHHHHHHHTTSEEEEE-TTT---TT
T ss_pred hccccccccc--hhhhhhhhhhhcc------ccceEEeecccccccEEeeec---eehhhhhccCCceeEechhc---cc
Confidence 9999887433 5789999999975 999999999999999999955 58889999999999999997 44
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc-------------------
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS------------------- 300 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~------------------- 300 (469)
..+ ..+. ..+..+++.|..|.+|.+ .+|+++.+++.+.. ++....
T Consensus 182 ~~~-id~~------------~~~~D~~~~s~~Kl~gp~--G~g~l~v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~ 245 (371)
T PF00266_consen 182 CVP-IDLD------------ELGADFLVFSSHKLGGPP--GLGFLYVRPEAIER-LRPAKPGGGYLDFPSLQEYGLADDA 245 (371)
T ss_dssp TSS---TT------------TTTESEEEEESTSTTSSS--TEEEEEEEHHHHHH-HHTSSSSSSTTTHHHHHHHCHHSTT
T ss_pred ccc-cccc------------ccccceeeecccccCCCC--chhhheehhhhhhc-cccccccccccccccchhccccccc
Confidence 332 2222 235667889999944444 47999986654433 221100
Q ss_pred --c--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cceec----CCceEEEEEecccccccC
Q 043923 301 --F--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLK----SNAGLFCWVDMRHLLRSN 371 (469)
Q Consensus 301 --~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~----~~~g~~~~v~~~~~~~~~ 371 (469)
+ ++.+.+...++..+++... +.-+++.+++..+..+++.+.|++++ +.+.. ...+..+.+.++..
T Consensus 246 ~~~~~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 319 (371)
T PF00266_consen 246 RRFEGGTPNVPAIYALNEALKLLE--EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS---- 319 (371)
T ss_dssp TGSSSSS--HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS----
T ss_pred ccccccceeeehhhhHHHHHhhhh--ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC----
Confidence 1 1344444444444443321 23356667778888888999998884 44433 22334555666431
Q ss_pred ChhHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeecC-CHHHHHHH
Q 043923 372 TFEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANM-SEDTLKLS 420 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~~-~~e~i~~~ 420 (469)
+..++...|.++ ||.+..|..+.. ...+.+|+|++.. +++|++++
T Consensus 320 ---~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 320 ---DADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp ---SHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ---CHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 122455555544 999999876541 1137899999874 89999874
No 241
>PLN02624 ornithine-delta-aminotransferase
Probab=99.82 E-value=2e-17 Score=170.21 Aligned_cols=297 Identities=15% Similarity=0.131 Sum_probs=179.7
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC---------CCC-EEEEccCCCcChHHHHhhhCC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE---------PGE-AFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~---------~gd-~Vl~~~P~y~~~~~~~~~~~g 157 (469)
..+|.+.+++++ ..+.+++++++++|+..++..... +++ .|+...-+|.+....+....+
T Consensus 119 ~~~la~~L~~~~----------~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 119 FPEFAEYLTSMF----------GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred HHHHHHHHHhhc----------CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence 355666666543 246899999999999999875432 123 577777777665322221111
Q ss_pred CE------------EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHH-HHHHHHHHHhcC
Q 043923 158 VE------------IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE-LNLLVNIITEKN 224 (469)
Q Consensus 158 ~~------------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~-l~~l~~~~~~~~ 224 (469)
-. +..+|. .|++.+++.++. ...++.+|++..++|++|.+++.++ +++|.++|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred CccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11 112221 167888888763 2247888888888999999887774 999999999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cc
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FG 302 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~ 302 (469)
+++|+||+|.++...+..+ . .+... ..+.++ ++||.+|.+++++|+++++++ +...+..... ..
T Consensus 259 illI~DEv~tG~GrtG~~~-a-~~~~~--------i~pDiv---~lsK~lggG~~pigav~~~~~-i~~~~~~~~~~~T~ 324 (474)
T PLN02624 259 VLMIADEIQTGLARTGKML-A-CDWEE--------VRPDVV---ILGKALGGGVIPVSAVLADKD-VMLCIKPGEHGSTF 324 (474)
T ss_pred CEEEEeccccCcCcCcchh-h-HHhcC--------CCCCEE---EecccccCCCCcceeeeecHH-HHhHhccCCcCCCC
Confidence 9999999998743333211 1 11111 112233 468999966699999999544 4333332221 11
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----C--CceecCCceEEEEEecccccccCChhHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----G--ISCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g--~~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
..+++.+.++.+.|+... . ....+...+..+.+.+.|+++ . +....+.+ .++.+.+..... .....
T Consensus 325 ~g~pl~~aaa~aaLe~l~--~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G-~~~~i~l~~~~~--~~~~a 396 (474)
T PLN02624 325 GGNPLASAVAMAALQVVQ--D---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRG-LLNAVVLNSPKL--GPVSA 396 (474)
T ss_pred CCCHHHHHHHHHHHHHHH--h---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeE-EEEEEEecCCCc--ChHHH
Confidence 356777777777764321 1 112222333334444444332 1 22233444 555555542110 01223
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+++..+ .++||.+.|+. ++++|+++.. ++++++++++++|+++++.-..
T Consensus 397 ~~~~~~L-~e~GV~v~p~~------~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~ 447 (474)
T PLN02624 397 YDVCLKL-KERGLLAKPTH------DTIIRLAPPLSISEDELQECSKALSDVLEHDLP 447 (474)
T ss_pred HHHHHHH-HhCCeEEecCC------CCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566665 56799998762 5689999754 5999999999999999866554
No 242
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.81 E-value=8.8e-18 Score=170.54 Aligned_cols=275 Identities=12% Similarity=0.102 Sum_probs=176.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEEccCCCcChHH----HHhhhCCCEE----EEeeccCCCCcccCHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPG---EAFLLPTPYYPGFDR----DLKWRTGVEI----VPIQCTSLNGFQITETA 177 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~g---d~Vl~~~P~y~~~~~----~~~~~~g~~~----~~v~~~~~~~~~~d~~~ 177 (469)
.++++|++|+|+|+++..++.++.+++ +.|++....|+.... .++.. |+++ +.++.+ .++.+|++.
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLTVEESMVQIEPR--EEETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhc-CCCcccceEEeccC--CCCccCHHH
Confidence 678999999999999999999886654 368888888987433 23444 8876 455543 344678889
Q ss_pred HHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~ 257 (469)
+++.++.. ++++++|++++++|.||.+++ +++|.++|+++|+++++|++++ ++..+ ..+.
T Consensus 161 l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~---~G~~~-id~~---------- 220 (406)
T TIGR01814 161 ILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA---VGNVP-LDLH---------- 220 (406)
T ss_pred HHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc---cCCcc-cccc----------
Confidence 98887532 347899999999999999998 5558889999999999999998 33222 2221
Q ss_pred CCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhc------------------------ccccCcHHHHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMS------------------------SFGLVSSQTQYLL 312 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~------------------------~~~~~s~~~q~~~ 312 (469)
..+..+++.|.+|+++ -|| .|..+. ++.......... ..++.+.+...++
T Consensus 221 --~~gvD~~~~s~hK~l~g~pG--~~l~v~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l 295 (406)
T TIGR01814 221 --DWGVDFACWCTYKYLNAGPG--AGAFVH-EKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAAL 295 (406)
T ss_pred --cCCCCEEEEcCccccCCCCC--eEEEEe-hhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHH
Confidence 2256788899999874 344 333333 332211110000 0122344444444
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceecCC----ceEEEEEecccccccCChhHHHHHHHHH
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-----GISCLKSN----AGLFCWVDMRHLLRSNTFEAEMELWKKI 383 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g~~v~~~~----~g~~~~v~~~~~~~~~~~~~~~~l~~~l 383 (469)
.++++-.. ..-++..+++..+..+++.+.|++. ++++..+. .+..+.+.++ .. ..++...|
T Consensus 296 ~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~------~~~~~~~L 365 (406)
T TIGR01814 296 RGSLDIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VP------GKAVFQAL 365 (406)
T ss_pred HHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CC------HHHHHHHH
Confidence 44433211 1113556667777777888888764 36665442 1234555555 11 12455555
Q ss_pred HHhCCeEEeCCCCCCCCCCCeEEEEee-c-CCHHHHHHHHHHHHHHH
Q 043923 384 VYDVKLNISPGSSCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 384 l~~~GI~v~pg~~f~~~~~~~iRi~~~-~-~~~e~i~~~l~~L~~~l 428 (469)
.++||.+... .++.+|+|++ . .+++++++++++|++++
T Consensus 366 -~~~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 366 -IKRGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -HHCCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 4669987532 2458999994 3 49999999999998875
No 243
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=5.7e-17 Score=163.20 Aligned_cols=351 Identities=13% Similarity=0.056 Sum_probs=215.7
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
...|+|-..||..++......-........ +| +..-.-|+.....+++.....+..++.|+ .+.-+|-.-
T Consensus 49 ~~~l~LiasEN~~s~~v~~a~~s~l~nkya---eg---~pg~ryy~g~~~~d~ie~l~~~ra~~lf~----a~~anvqp~ 118 (493)
T PRK13580 49 RSSLKLIASENYSSLAVQLAMGNLLTDKYA---EG---TPGHRFYAGCQNVDTVEWEAAEHAKELFG----AEHAYVQPH 118 (493)
T ss_pred hcCceEecccccCCHHHHHHhcccccccCc---CC---CCCccccCCCchHHHHHHHHHHHHHHHhC----CCcccccCC
Confidence 356889888988776533332222211111 11 11223355566677777777777777766 445566666
Q ss_pred CChHHHHHHHHHHhcCC-------------------------------CCEEEEccCCCcChHHH---Hhhh-CCCEEEE
Q 043923 118 AGATSANETLMFCLAEP-------------------------------GEAFLLPTPYYPGFDRD---LKWR-TGVEIVP 162 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~-------------------------------gd~Vl~~~P~y~~~~~~---~~~~-~g~~~~~ 162 (469)
+|+ +|+..++.++++| ||+|+..++..+++... .... ...+++.
T Consensus 119 Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~ 197 (493)
T PRK13580 119 SGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRS 197 (493)
T ss_pred CcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEe
Confidence 665 5666777888876 89999888776554211 1111 0245666
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++++.+ ...+|++++++.+++ .++.|+++..+|- |...+ +++|.++|+++|+++++|++|.-..+.+..
T Consensus 198 y~vd~~-~g~iD~d~l~~~~~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~ 266 (493)
T PRK13580 198 YGVDPD-TGLLDYDEIAALARE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV 266 (493)
T ss_pred cccCcc-cCccCHHHHHHHHhh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceecccc
Confidence 666643 346899999999886 6667788877776 44666 555788888999999999999855454322
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc--cCcHHHHHHHHHHhcCch
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~ 320 (469)
.... ..+ ..+..++++|++|++ .|-+.|++++++ .+.+.+....++. +..++...+++..+....
T Consensus 267 ~~~~--~~~--------~~~~D~vtgT~hKaL--~GP~GG~I~~~~-~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~ 333 (493)
T PRK13580 267 FTGD--EDP--------VPHADIVTTTTHKTL--RGPRGGLVLAKK-EYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR 333 (493)
T ss_pred chhh--cCC--------CCCCcEEEeCChhhc--cCCCeEEEEecH-HHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh
Confidence 1100 000 114568899999998 233458888854 4444454333332 122222222222222110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
....+..++++.++.++|.+.|.+.|+++.. ...+..+++.+.+.. .....+.+.|.+.||.+.+-.....
T Consensus 334 --~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~Ptv 405 (493)
T PRK13580 334 --TPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIPSD 405 (493)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCCCC
Confidence 1112456778888999999999999998753 233467788886421 1223456567788999975443322
Q ss_pred -CC---CCeEEEEeec-----CCHHHHHHHHHHHHHHHHhh
Q 043923 400 -TE---PGWFRVCFAN-----MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 400 -~~---~~~iRi~~~~-----~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+ +..|||++.. +++++++++++.|.++++..
T Consensus 406 p~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 406 PNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 22 5679999864 25899999999999998754
No 244
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.81 E-value=2.2e-17 Score=166.24 Aligned_cols=296 Identities=13% Similarity=0.132 Sum_probs=185.2
Q ss_pred CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 85 YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 85 ~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
.....+|++++|++++ .++.++++|+++|+..++.++ +++||.|+++.|+|..+...+... |++++.+
T Consensus 28 g~~~~~le~~la~~~g----------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~~~~ 96 (380)
T TIGR03588 28 GPTVPAFEEALAEYVG----------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYC-GAKVDFV 96 (380)
T ss_pred ChhHHHHHHHHHHHHC----------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCEEEEE
Confidence 3456899999999996 234566778899999999998 789999999999999998888777 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-ccCCCC
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VFSSPG 242 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~~~~~ 242 (469)
++++ .++.+|++++++++++. ..+++++|+++ |++|...+ +++|.++|++||++||+|++++.. .+++..
T Consensus 97 ~~~~-~~~~~d~~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~ 167 (380)
T TIGR03588 97 DIDP-DTGNIDEDALEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGGKP 167 (380)
T ss_pred ecCC-CcCCcCHHHHHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCCEe
Confidence 9875 35779999999998731 01277887754 56898776 566888899999999999999842 122211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCc--cccCCCcceEEEEEecCHHHHHHHHHhccccc-----------------
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLS--KDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL----------------- 303 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~----------------- 303 (469)
.. .. . ...+.+.|++ |.++. | ..|+++..++.+.+.++.....+.
T Consensus 168 ~g---~~-~----------~~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 231 (380)
T TIGR03588 168 VG---NC-R----------YADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYY 231 (380)
T ss_pred CC---Cc-c----------ccceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCccee
Confidence 10 00 0 1135555665 88863 3 468888877776655543322110
Q ss_pred ----------CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC-C---ceEEE-EEecccc
Q 043923 304 ----------VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS-N---AGLFC-WVDMRHL 367 (469)
Q Consensus 304 ----------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~-~---~g~~~-~v~~~~~ 367 (469)
++.+....+..-|. .+++..++-++..+++.+.|..+ ++.+..+ . ..+++ .+.++..
T Consensus 232 ~~~~~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 304 (380)
T TIGR03588 232 EQQELGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE 304 (380)
T ss_pred eeeccccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc
Confidence 11111111111111 13444445555666777777765 3443322 1 12222 2233211
Q ss_pred cccCChhHHHHHHHHHHHhCCeEEeCCCCC-----------CCC-C-------CCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 368 LRSNTFEAEMELWKKIVYDVKLNISPGSSC-----------HCT-E-------PGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 368 ~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f-----------~~~-~-------~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
. . .+..++.+.| +++||.++..-.. ... - ...+++.+.. +++++++..++.|+++
T Consensus 305 -~--~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 305 -F--G-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred -C--C-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 0 0 1223455554 5779988743211 000 0 1457787754 5999999999999886
Q ss_pred H
Q 043923 428 V 428 (469)
Q Consensus 428 l 428 (469)
+
T Consensus 380 ~ 380 (380)
T TIGR03588 380 L 380 (380)
T ss_pred C
Confidence 4
No 245
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.81 E-value=6.8e-19 Score=165.03 Aligned_cols=288 Identities=18% Similarity=0.268 Sum_probs=178.5
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC------CCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP------GEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~------gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
.++|.++|.++++..-+ ..++.-.|++++|++|++++++.+|... --.|+...|.|+.|....... .-...
T Consensus 45 s~eL~~~Ir~LH~~VGN--Avt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f-~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGN--AVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFF-DSRLY 121 (363)
T ss_dssp -HHHHHHHHHHHHHH-S--B--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTE
T ss_pred cHHHHHHHHHHHHHhcc--ccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhc-cccCc
Confidence 58999999998876644 2345568999999999999999998532 147999999999998776544 33222
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE-EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV-LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v-vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
...-|. ..|. +- +.....| ++++||||.|.. .+.+++ .-+..+|.|-||.-..|..
T Consensus 122 ~w~Gda-~~~~-~~-------------~~~~~~IElVTSPNNPDG~l-----r~~V~~---g~~~k~I~D~AYYWPhyTp 178 (363)
T PF04864_consen 122 KWAGDA-SNFK-NS-------------DNPSPYIELVTSPNNPDGQL-----REAVLN---GSSGKVIHDLAYYWPHYTP 178 (363)
T ss_dssp EEEEEC-CCGT-T--------------S-CCGEEEEEESS-TTT-----------SST---TTEEEEEEE-TT-STTTS-
T ss_pred cccccH-Hhhc-cC-------------CCCCCeEEEEeCCCCCcccc-----cchhcC---CCCcceeeeeeeecccccc
Confidence 333222 1221 10 0022334 899999999987 444443 5567789999997332322
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcC
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSD 318 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~ 318 (469)
-. . ..+..|.+.|+||.-|.+|-|+||.+..+..+.+.+.++... ..+|.-+|.-+..+|+.
T Consensus 179 I~--~--------------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~ 242 (363)
T PF04864_consen 179 IT--A--------------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKV 242 (363)
T ss_dssp ----S---------------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHH
T ss_pred cC--C--------------CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 11 1 225667888999999999999999999888887776554322 23777777766666552
Q ss_pred c----hh---hHHHHHHHHHHHHHHHHHHHHHHHhcC-Cce--ec-----------CCceEEEEEecccccccCChhHHH
Q 043923 319 K----KF---TQNYISENKKRLKQRHRKLVSGLEKAG-ISC--LK-----------SNAGLFCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 319 ~----~~---~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v--~~-----------~~~g~~~~v~~~~~~~~~~~~~~~ 377 (469)
. +. ..+....-++.+++|.+.|.+.+.+-+ ++. .. ....-|.|+++....+
T Consensus 243 v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed-------- 314 (363)
T PF04864_consen 243 VLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED-------- 314 (363)
T ss_dssp HHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------
T ss_pred HHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccc--------
Confidence 1 10 012456667788888888998887542 111 11 1123599999985321
Q ss_pred HHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+-|...|+++||.-+.|..|+. ++.|+|||+-. ++++++.++++|+.+
T Consensus 315 ~DC~~~l~~~~I~tr~G~~fga-~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 315 EDCYAVLREAKIITRSGVLFGA-DSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp SSHHHHHHCTTEEEEEGGGGTS--TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred ccHHHHHHhCCcccCCCCccCC-CCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 2377788899999999999986 57799999974 899999999999864
No 246
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=5.9e-17 Score=161.56 Aligned_cols=211 Identities=13% Similarity=0.164 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEEee
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPIQ 164 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v~ 164 (469)
.+.++++++.+....+ ..+. ++++++++|+..++.+++++||.|++++|.|+++... ++.. |+++..++
T Consensus 63 nPt~~~Le~~la~le~-----~~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~-Gi~v~~vd 135 (395)
T PRK05967 63 TPTTDALCKAIDALEG-----SAGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRL-GVEVEYYD 135 (395)
T ss_pred ChHHHHHHHHHHHHhC-----CCCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhc-CeEEEEeC
Confidence 4544555555443221 3444 4555578999999999999999999999999987643 3555 99988875
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+ +.+.+++++++ ++++|++++|+||++. ..++++|+++|+++|+++|+|++|+..++-
T Consensus 136 ~~-------~~e~l~~al~~------~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----- 194 (395)
T PRK05967 136 PE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF----- 194 (395)
T ss_pred CC-------CHHHHHHhcCc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec-----
Confidence 32 34668877765 8999999999999764 456888999999999999999999753221
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHH-Hhcccc-cCcHHHHHHHHHHhcCchh
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAAT-KMSSFG-LVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~-~~~~~~-~~s~~~q~~~~~~l~~~~~ 321 (469)
... ..+..+++.|.+|.++ -.++-.|+++.++. ..+.+. .....+ .+++...+.+.+-++.
T Consensus 195 ~pl------------~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~-~~~~l~~~~~~~G~~~~p~da~l~~rgl~T--- 258 (395)
T PRK05967 195 RPL------------DFGVDISIHAATKYPSGHSDILLGTVSANEK-CWPQLLEAHGTLGLCAGPDDTYQILRGLRT--- 258 (395)
T ss_pred Chh------------HcCCCEEEEecccccCCCCCeeEEEEEcCHH-HHHHHHHHHHHcCCCCCHHHHHHHHcCccc---
Confidence 112 2256689999999874 34577887776443 322222 222222 3555555544444433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.-+.++..++...+.+.|+++
T Consensus 259 ----l~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 259 ----MGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhC
Confidence 4455566677778888899877
No 247
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.3e-17 Score=152.02 Aligned_cols=344 Identities=15% Similarity=0.180 Sum_probs=223.6
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
..+||-+.+-..|.+.+++++.+.. -+..-|+.......|++.+|+.++ +...+++++
T Consensus 22 ~~vDLRSDTvT~PTdeMr~am~eA~-------------vgDdVyGeD~tt~rLE~~vA~l~G---------KEAgLFv~S 79 (384)
T KOG1368|consen 22 RSVDLRSDTVTVPTDEMRRAMAEAS-------------VGDDVYGEDPTTNRLEQRVAELFG---------KEAGLFVPS 79 (384)
T ss_pred eccccccccccCChHHHHHHHhhcc-------------cCcccccCCccHHHHHHHHHHHhC---------ccceeeecc
Confidence 4689999988889988888887752 123346666667999999999997 345577888
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH--HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH--hcCCceeE
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRD--LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ--KRHLKVKG 194 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~~~~~ 194 (469)
|+...+..++..+-++|..|++.+-+|--..+. +....|+.+.++.-. .+-.+++++++.++.... -..+.+++
T Consensus 80 GTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 80 GTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred cccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence 877777777777777999999998876433222 222337777777644 344689999999987321 23457899
Q ss_pred EEEecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 195 VLVTNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 195 vvl~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
|++.|-+|-+| .++|.|++.++.++|++||+.+..|.+.. |+.. ...++..+.. ..+.+-+ .+|
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi---~NAavasgV~vk~i~~--------~fDSVsi--CLS 224 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI---FNAAVASGVPVKKICS--------AFDSVSI--CLS 224 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh---hhHHHHcCCCHHHHHH--------hhhhhhh--hhh
Confidence 99999987776 99999999999999999999999999886 6532 2245555544 2233322 689
Q ss_pred cccCCCcceEEEEEecCHH-HHHHHHHhccccc-C--cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 272 KDLGLPGFRVGAIYSNDDM-VVAAATKMSSFGL-V--SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~-~~~~~~~~~~~~~-~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|.+|.| +|.++..++. +.++.......+. + +.+..+++.-+|.. . ....+ .-.++.+.+.+.++..
T Consensus 225 KglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~-~-----~~~L~-~dHk~A~~lAe~~~~~ 294 (384)
T KOG1368|consen 225 KGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE-N-----VPLLR-ADHKRAKELAEYINTP 294 (384)
T ss_pred ccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc-c-----hHHHH-HHHHHHHHHHHHhccc
Confidence 999855 7887654544 4433322223321 1 22222222222221 1 22222 2233456677777776
Q ss_pred C-CceecC-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 348 G-ISCLKS-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 348 g-~~v~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
+ +++.-+ ...+++.+.+.... ....+++..+ +++||.+.+|..+ .+|+.+.. +++++++..+..+
T Consensus 295 ~~i~v~v~a~etNiv~~~l~q~~-----~~~~~l~~~~-~k~gi~lm~~~s~------r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 295 EEIRVEVPAVETNIVNMVLCQAR-----LTAEELCKFL-EKNGILLMGGASR------RIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred cceeeecchhhcceeeeeccccc-----CCHHHHHHHH-HHCCeEEeecccc------ceEEEEEEecCHHHHHHHHHHH
Confidence 4 666443 34467766654211 1233566665 5789999987643 48999976 7999999999999
Q ss_pred -HHHHHhhcccccccccc
Q 043923 425 -KAFVDSITTTLHNQSNH 441 (469)
Q Consensus 425 -~~~l~~~~~~~~~~~~~ 441 (469)
+.++.....-+..-+||
T Consensus 363 ~k~~~~q~~~~~~~~~~~ 380 (384)
T KOG1368|consen 363 SKKFLKQLTFCFNGPTNF 380 (384)
T ss_pred HHHHHhhcCcccCCcchh
Confidence 55555553333333333
No 248
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=6.7e-17 Score=164.21 Aligned_cols=353 Identities=14% Similarity=0.081 Sum_probs=202.2
Q ss_pred CCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
......+||+..+ ...+. .+.+.+++++..+. .. ...+.. ...+....+|+.+.+.... -
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~----------~~-~~~~~~--~~~~~~~~la~~l~~~~p~---~ 99 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQ----------FT-HTAYQI--VPYASYVTLAERINALAPI---D 99 (421)
T ss_pred eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhh----------cc-cccccc--cCChHHHHHHHHHHHhCCC---C
Confidence 3344568888765 23333 45566666653111 00 111111 1123334555555433210 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCE-------------EEEeeccCC-CC--c
Q 043923 110 DTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVE-------------IVPIQCTSL-NG--F 171 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~-------------~~~v~~~~~-~~--~ 171 (469)
..+.+++++++++|++.+++... .....|+....+|++....+....+.. +..++.+.. .+ .
T Consensus 100 ~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 179 (421)
T PRK06777 100 GPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSV 179 (421)
T ss_pred CCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCH
Confidence 24689999999999999887652 233568888888877654332211210 111121110 00 0
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
..+++.+++.+++. ....++.+|++....+..|. +++.+.+++|.++|++||+++|.||+|.++.+.+.. .+...+
T Consensus 180 ~~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~- 256 (421)
T PRK06777 180 EEALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYY- 256 (421)
T ss_pred HHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhc-
Confidence 01245566655421 01235666665544677885 689999999999999999999999999985444431 121111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 328 (469)
. ..+.++ ++||.+| +|+|+||+++++ .+.+.+.... ..+..+++++.++.+.|+... + +.
T Consensus 257 ~--------~~pDiv---~~sK~l~-~G~pigav~~~~-~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~---~--~~ 318 (421)
T PRK06777 257 D--------VKPDLI---TMAKSLG-GGMPISAVVGRA-EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIA---E--EK 318 (421)
T ss_pred C--------CCCCEE---eeehhhc-CCCceEEEEEcH-HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h--cc
Confidence 1 112322 7999999 999999999954 4544443221 122367888888888875321 1 23
Q ss_pred HHHHHHHHHHHHHHHHHhc----C-CceecCCceEEEEEeccccc-ccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 329 NKKRLKQRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLL-RSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~----g-~~v~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
..++++++.+++.+.|+++ + +....+.|.+| .+.+.... ..........+...+ .++||.+.|+..|+
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~~~~g---- 392 (421)
T PRK06777 319 LCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQA-LEEGLLLLSCGVHG---- 392 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHH-HhCCeEEeecCCCC----
Confidence 4455556666666666654 2 23345666555 44443211 011111122333334 46799999987663
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 403 GWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 403 ~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
+++|+++.. ++++++++++++|.+++.
T Consensus 393 ~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 393 NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 589999965 599999999999999874
No 249
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.9e-17 Score=155.49 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=205.8
Q ss_pred eeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCCh
Q 043923 41 IQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA 120 (469)
Q Consensus 41 i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~ 120 (469)
++|..+.-.-+.+.+.+++.+... ....-|+..+-...+.+.+++.++ .+.++++.++
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~------------~~~~~YG~D~~~~~~e~~~ae~~g----------~~a~~Fv~sG 59 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA------------VGDDVYGEDPTTNALEQRIAELFG----------KEAALFVPSG 59 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc------------cCCCCCCCCHHHHHHHHHHHHHhC----------CceEEEecCc
Confidence 566666555676777777776421 122346555444455555555443 3889999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCCcChHHH--HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 043923 121 TSANETLMFCLAEPGEAFLLPTPYYPGFDRD--LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 121 ~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~ 198 (469)
|++..+++.+.++||+.|++..-.|-...+. +....+... ++..+..+..+++++++.++....-....+.++++.
T Consensus 60 T~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~--~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e 137 (342)
T COG2008 60 TQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQK--LPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE 137 (342)
T ss_pred cHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCce--eccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe
Confidence 9999999999999999999998877543322 222212222 233333445789999999887511122345566666
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc
Q 043923 199 NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG 278 (469)
Q Consensus 199 ~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 278 (469)
|++|-.|.++|.+++++|.++|+++|+.+..|.+...-...... ++..++.. ...++..++||..+.|
T Consensus 138 ~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~----------~~D~v~~~~tK~g~~~- 205 (342)
T COG2008 138 NTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKS----------YVDSVSFCLTKGGGAP- 205 (342)
T ss_pred eccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHh----------hCCEEEEecccCCcce-
Confidence 67668899999999999999999999999999987421111111 34444422 3445556899988766
Q ss_pred ceEEEEEecCHHHHHHHHHh---cccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHH-HHHHHHHHHHHHhc-CCcee
Q 043923 279 FRVGAIYSNDDMVVAAATKM---SSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRL-KQRHRKLVSGLEKA-GISCL 352 (469)
Q Consensus 279 lRiG~li~~~~~~~~~~~~~---~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~l~~~L~~~-g~~v~ 352 (469)
+|.|+.-+..+.+.+... ...+ .-+.+.......+|++.-| + ..++. .+....|.+.|+.. |+++.
T Consensus 206 --~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~----~--~~~~Han~mA~~La~~~~~~~G~~~~ 277 (342)
T COG2008 206 --VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVW----R--LAADHANAMAARLAEGLEAKPGVKLA 277 (342)
T ss_pred --eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHH----H--HHHHHHHHHHHHHHHhhhhcCCceec
Confidence 498887676665544332 2222 1223444444555665433 1 11111 11256688888854 99988
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
.+.-.+.+++.+++..- +... ....+.+.|+.+.++. .-+|+..+. ++++++++++..+++++
T Consensus 278 ~~~~tN~vf~~l~~~~i-----~~l~-~~~~~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 278 FPVETNMVFVRLPESAI-----EALR-LAGALFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cCCcccEEEEECChHHH-----HHHH-hhchhheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 76556899999985210 1111 1112223344443322 369998877 69999999999998865
No 250
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=9.5e-17 Score=164.78 Aligned_cols=346 Identities=15% Similarity=0.125 Sum_probs=204.3
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHH----HHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAF----KKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~L----r~aia~~l~~~~~~~~~~~~~~ 113 (469)
...|+|...||..++................ + ......|........+ |+.++++++ .++++
T Consensus 34 ~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~---g---~p~s~~~~g~~~~~~iE~~ar~~~a~lf~--------a~~~~ 99 (452)
T PTZ00094 34 IEGLELIASENFTSRAVLECLGSCFTNKYAE---G---LPGNRYYGGNEVVDKIENLCQKRALEAFG--------LDPEE 99 (452)
T ss_pred HcCeeEecccccCCHHHHHHhcchhhccccC---C---CCCccccccchHHHHHHHHHHHHHHHHhC--------CCccc
Confidence 3569999999998876444333322111000 0 0011112222222333 345666664 46777
Q ss_pred EEEe---CChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh---------CCCEEEEeeccCCCCcccCHHHHHHH
Q 043923 114 IVLT---AGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR---------TGVEIVPIQCTSLNGFQITETAIEEA 181 (469)
Q Consensus 114 i~~t---~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~---------~g~~~~~v~~~~~~~~~~d~~~l~~~ 181 (469)
+.++ +|+++++..++.+++++||.|++....|..+....... .+.++..++++. +..+|++++++.
T Consensus 100 ~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~ 177 (452)
T PTZ00094 100 WGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEEL 177 (452)
T ss_pred ceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHH
Confidence 7666 78999999999999999999999877776654332110 013344555553 246899999999
Q ss_pred HHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcC
Q 043923 182 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 182 i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
+++. ++++|++. ++.+|...+.++ |.++|+++|+++++|++++-.......... + ..
T Consensus 178 l~~~-----~~~lvi~~--~s~~g~~~di~~---I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-----~--------~~ 234 (452)
T PTZ00094 178 AKAF-----RPKLIIAG--ASAYPRDIDYKR---FREICDSVGAYLMADIAHTSGLVAAGVLPS-----P--------FP 234 (452)
T ss_pred HHHh-----CCCEEEEe--CCCCCCccCHHH---HHHHHHHcCCEEEEeccchhccccCCCCCC-----C--------CC
Confidence 8642 56666654 334999988665 777888999999999999743222211010 0 11
Q ss_pred CeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----cc-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----SF-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 262 ~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
+..+++.|.+|+++ |.+.|++++.+........... .+ ++.+.....++.++++... ....+..++++.+
T Consensus 235 ~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~--~~~~~~~~~~i~~ 310 (452)
T PTZ00094 235 YADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQ--SPEWKEYAKQVLK 310 (452)
T ss_pred CCcEEEcCCccCCC--CCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHh--ChhHHHHHHHHHH
Confidence 35578899999873 2334888875432221111111 11 1223333333333333211 1123556678888
Q ss_pred HHHHHHHHHHhcCCceecCCc-eEEEEEecccccccCChhHHHHHHHHHHHhCCeEE-eCCCCCCC--CCCCeEEEEeec
Q 043923 336 RHRKLVSGLEKAGISCLKSNA-GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNI-SPGSSCHC--TEPGWFRVCFAN 411 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~v~~~~~-g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v-~pg~~f~~--~~~~~iRi~~~~ 411 (469)
+.++|.+.|.+.|+++..+.. ...+.+.+.... . +.+.+..+|+++||.+ .++..+.. ..++.+|+++..
T Consensus 311 l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~-----~-~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~ 384 (452)
T PTZ00094 311 NAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFG-----I-TGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPA 384 (452)
T ss_pred HHHHHHHHHHhCCcEEecCCCCCceEeecCCcCC-----C-CHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHH
Confidence 889999999888887764221 223444543211 0 1124555667789999 45544332 235789999965
Q ss_pred C-----CHHHHHHHHHHHHHHHHhhc
Q 043923 412 M-----SEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 412 ~-----~~e~i~~~l~~L~~~l~~~~ 432 (469)
. +++|++++++.|.++++...
T Consensus 385 ~tt~g~~~~di~~l~~~l~~~~~~~~ 410 (452)
T PTZ00094 385 LTTRGAKEKDFKFVADFLDRAVKLAQ 410 (452)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4 38999999999999998643
No 251
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.80 E-value=1e-16 Score=161.25 Aligned_cols=309 Identities=17% Similarity=0.134 Sum_probs=195.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCC-CCcEEEeCChH-HHHHHHHHHhcC---CCCEEEEccCCCcChHHHHhhhCCCEEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFD-TSKIVLTAGAT-SANETLMFCLAE---PGEAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t~G~~-~al~~~~~~l~~---~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~ 162 (469)
...|.+.+.+.+.+.+| ++ .+..++++|+| .++.+++.++.. +||.|+++.-+|.....++... |++++.
T Consensus 103 ~~~l~~~~e~~~~~~~G----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~-G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLG----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTA-GFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcC----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHc-CCeEEE
Confidence 34555555555555444 32 24688888888 688888777642 5899999999999888888887 999999
Q ss_pred eec-cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 163 IQC-TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 163 v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
++. ..++.|.+|+++++++|++. +++..++++.+|+ |+.....+++++|+++|++||+++|+|++|+. ...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~---~~~ 249 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGL---QSN 249 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcC---cCh
Confidence 995 23467999999999999852 1245566777665 56556677888999999999999999999983 111
Q ss_pred Cccchhhhhh-ccccccCCcCC-eEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCc
Q 043923 242 GFVSIMEILK-DRNCENTQVWN-RVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDK 319 (469)
Q Consensus 242 ~~~s~~~~~~-~~~~~~~~~~~-~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 319 (469)
....+.. .. ..+ ..+++.|++|.+.++|. .|.++++++.+.+.+.........+++.+.+...++..+
T Consensus 250 ---~~~~~~~~g~------~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G 319 (444)
T TIGR03531 250 ---KYMELINKAI------KVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLG 319 (444)
T ss_pred ---hhhhhhhccc------cccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhC
Confidence 1111111 00 112 25667899999988776 344447566666655544332224456777766666543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCce-EEEEEecccccccCChhHHHHHHHHHHHhCCe---E-
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKL---N- 390 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g-~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI---~- 390 (469)
.+.+++..++..++++++.+.|+++ |.++.....+ .-+.+.+.... . .+... .-.+|...+| .
T Consensus 320 ---~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~---~~~~~-~g~~l~~~~v~g~r~ 391 (444)
T TIGR03531 320 ---SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-G---KDPTM-LGSMLYSRRVTGPRV 391 (444)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-c---cCHHH-HHHHHHhCCCCCcee
Confidence 4556777777777888888877764 6666644322 23344444321 1 11223 3334444455 2
Q ss_pred EeCCC-------CC---CCCCC----CeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 391 ISPGS-------SC---HCTEP----GWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 391 v~pg~-------~f---~~~~~----~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
|.||. .| +...+ .|+-++-+- ++++|++.++++|.++
T Consensus 392 v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 392 VTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred ecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 34555 22 22111 144332221 5899999999999875
No 252
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2.3e-16 Score=160.09 Aligned_cols=358 Identities=13% Similarity=0.048 Sum_probs=198.7
Q ss_pred CCCCCCCCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCC
Q 043923 31 YDEVQNPTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNK 106 (469)
Q Consensus 31 ~~~~~~~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~ 106 (469)
|........+||+..+. ..+. .+.+.+++++..+ ....+.......+....+|+.+.+...
T Consensus 33 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p-- 97 (425)
T PRK07495 33 EIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLD-------------RFTHTCHQVVPYENYVRLAERLNALVP-- 97 (425)
T ss_pred EEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHh-------------hccCcccCccCCHHHHHHHHHHHHhCC--
Confidence 33334445689987652 3343 4666666665321 111111101112344445555554321
Q ss_pred CCCC-CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCCC
Q 043923 107 VTFD-TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLNG 170 (469)
Q Consensus 107 ~~~~-~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~ 170 (469)
-. .+.+++++++++|+..+++... .....|+.....|++.........|. .++.+|.+...
T Consensus 98 --~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (425)
T PRK07495 98 --GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL- 174 (425)
T ss_pred --CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-
Confidence 11 2689999999999999988652 23457888888887764222111010 22333332110
Q ss_pred cccC----HHHHHHHHHHHHhcCCceeEEEEecC-CCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 171 FQIT----ETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 171 ~~~d----~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
...+ ++.+++.++.. ....++.+|++..- +| +| ..+|.+.+++|.++|++||+++|+||+|.++...+.. .
T Consensus 175 ~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~ 251 (425)
T PRK07495 175 HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-F 251 (425)
T ss_pred ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-e
Confidence 0122 33344444320 01235666555422 45 78 4579999999999999999999999999875333321 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHh---cCc
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALL---SDK 319 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l---~~~ 319 (469)
... ..+.+.-+.++||.++ +|+++|++++++ .+.+.+... ...+..+++++.++.+.+ .+.
T Consensus 252 a~~------------~~gv~pDi~tlsK~l~-~G~pigav~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~ 317 (425)
T PRK07495 252 AME------------HHEVAADLTTMAKGLA-GGFPLAAVTGRA-EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE 317 (425)
T ss_pred eec------------ccCCCCCEEeehhhhc-CCccceEEEEcH-HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 111 1123334668999998 999999999954 444433221 122236777777555544 333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccC-ChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSN-TFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~-~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
++ .++++++.++++++.+.+.+ +++........|+++|+.+....... .......+...+ .++||.+.+...
T Consensus 318 ~l-~~~~~~~g~~l~~~L~~l~~---~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~g~-- 390 (425)
T PRK07495 318 DL-CERANQLGNRLKQRLASLRE---TVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKA-LEKGLILLTCGV-- 390 (425)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHh---hCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeecCC--
Confidence 33 34444444444444333322 22221111122799999985421111 111122344444 467999975321
Q ss_pred CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 399 CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 399 ~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
..+.+|+.... ++++++++++++|.+++++..
T Consensus 391 --~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 391 --HGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred --CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 13679999876 499999999999999998654
No 253
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.2e-16 Score=162.31 Aligned_cols=155 Identities=19% Similarity=0.270 Sum_probs=121.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v 163 (469)
..+|++.+|++.+ .+..++++++++|+..++.+++++||.|+++.+.|...... +... |++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (427)
T PRK05994 65 NAVLEERVAALEG----------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSF-GWQVRWA 133 (427)
T ss_pred HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 5788899998875 33477889999999999999999999999999999865432 4445 9999888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+... ...
T Consensus 134 d~~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~-~~~-- 194 (427)
T PRK05994 134 DAD-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY-LIR-- 194 (427)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc-cCC--
Confidence 743 67888888864 7999999999999999998 5568888999999999999997421 111
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS 286 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~ 286 (469)
+ + ..+..+++.|++|.+|-+|-.+|.+++
T Consensus 195 -p---l----------~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 -P---I----------EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred -c---c----------ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 1 1 124558889999999866766666554
No 254
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=9.5e-16 Score=149.48 Aligned_cols=305 Identities=18% Similarity=0.230 Sum_probs=219.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFD-TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
...+-+.+.+.++..++ .+ .+-++++.+++.+++.++..+++|||+|++......+ +...++.. |++++.+.
T Consensus 36 F~~~~~~~~~~L~~v~~----t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~-g~~v~~~~ 110 (383)
T COG0075 36 FVGIMKEVLEKLRKVFG----TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY-GAEVVVLE 110 (383)
T ss_pred HHHHHHHHHHHHHHHhc----CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh-CCceEEEe
Confidence 35555555555555544 33 3556778889999999999999999999998876544 34556666 99999988
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
... +-.+|+++++++|++ ++..++|.+++.-.+||...| +++|+++|++||.++|+|.+-+ +++.+.
T Consensus 111 ~~w--g~~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg~~~- 177 (383)
T COG0075 111 VEW--GEAVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGGEPL- 177 (383)
T ss_pred CCC--CCCCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCCccc-
Confidence 763 345899999999984 457888999988889999998 5558889999999999999988 676652
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHH------------------H-hcccccCc
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT------------------K-MSSFGLVS 305 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~------------------~-~~~~~~~s 305 (469)
.+ +.++..+++.+--|.+++| -.+|++..+++.+..... + ...+.+++
T Consensus 178 ~v------------d~wgiDv~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tpp 244 (383)
T COG0075 178 KV------------DEWGIDVAITGSQKALGAP-PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPP 244 (383)
T ss_pred ch------------hhcCccEEEecCchhccCC-CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCC
Confidence 22 2457888899999999853 357777776554433211 1 11223345
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccccCChhHHHHHHHH
Q 043923 306 SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 306 ~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
....+++..+|+... .+-++.+.+++++..+++++.++.+|++....+ +.....+.+|...+. .+....
T Consensus 245 v~~i~aL~~al~~i~--~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~------~~~~~~ 316 (383)
T COG0075 245 VNLIYALREALDLIL--EEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDD------KKVRRA 316 (383)
T ss_pred HHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCc------HHHHHH
Confidence 555566666665432 334688889999999999999999999877622 223445666654432 123447
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+++++||.+.+|. +......+||+.-. .+.+++..++.+|..++++..-
T Consensus 317 ~~~~~g~~i~gg~--~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 317 LLKEYGVEIAGGQ--GPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHhCCEEecccc--cccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 8888899998774 44456789998744 6999999999999999988765
No 255
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=2.1e-16 Score=160.16 Aligned_cols=288 Identities=16% Similarity=0.173 Sum_probs=181.4
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~ 162 (469)
....|++.+|++++ .+..+++++++.|+..++.+++++||.|++....|.+.... +... |++++.
T Consensus 70 ~~~~Le~~lA~l~g----------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~-Gi~v~~ 138 (436)
T PRK07812 70 TQDVVEQRIAALEG----------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKL-GIEVSF 138 (436)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcC-eEEEEE
Confidence 35788888888875 34467778888899999999999999999999888776543 2334 888887
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++ +. .|++++++++++ ++++|++.+|+||+|.+.+.++ |.++|+++|+++|+|++++....
T Consensus 139 vd-d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~Dl~~---I~~la~~~gi~liVD~t~a~~~~---- 199 (436)
T PRK07812 139 VE-DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLDIPG---VAEVAHEAGVPLIVDNTIATPYL---- 199 (436)
T ss_pred EC-CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecCHHH---HHHHHHHcCCEEEEECCCccccc----
Confidence 75 21 278888888764 7899999999999999999554 88888899999999999863211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-------------------------------
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV------------------------------- 291 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~------------------------------- 291 (469)
.... ..+..+++.|++|.+|-.|--+|.+++.....
T Consensus 200 -~~pl------------~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (436)
T PRK07812 200 -IRPL------------EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYA 266 (436)
T ss_pred -CCch------------hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHH
Confidence 1111 12455778999999987776677776632110
Q ss_pred HHHH-HHhcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ceecC-------------
Q 043923 292 VAAA-TKMSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI-SCLKS------------- 354 (469)
Q Consensus 292 ~~~~-~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~~~------------- 354 (469)
.+.. ......+ .+++...+.+.+-|+. +..+.++..++...+.+.|+++ ++ +|.-|
T Consensus 267 ~~~~~~~~~~~G~~l~p~~a~l~~rgl~t-------L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~ 339 (436)
T PRK07812 267 LKARVQLLRDLGSAISPFNAFLIAQGLET-------LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKR 339 (436)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHhcCcCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHH
Confidence 0111 1111222 2445444444443333 4555666677888899999887 33 22211
Q ss_pred ----CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC------------C---------CCCCeEEEEe
Q 043923 355 ----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH------------C---------TEPGWFRVCF 409 (469)
Q Consensus 355 ----~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~------------~---------~~~~~iRi~~ 409 (469)
..|-.+.+++.+.. +....++.. ++-..+.+.-|.... . -.++.||||+
T Consensus 340 ~~~~g~gg~~sf~l~~~~-----~~~~~f~~~-l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSv 413 (436)
T PRK07812 340 LAPKGTGAVLSFELAGGV-----EAGKAFVNA-LTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAV 413 (436)
T ss_pred hCcCCCceEEEEEecCCH-----HHHHHHHHh-CCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEe
Confidence 12345556664210 111222222 211122221121111 0 1145799999
Q ss_pred ecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 410 ANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+. |+.+.+++.|+++++..++
T Consensus 414 Gl---Ed~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 414 GI---EGIDDILADLEAGFAAAKA 434 (436)
T ss_pred cc---CCHHHHHHHHHHHHHhhhc
Confidence 95 6678888888888876654
No 256
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.3e-17 Score=148.31 Aligned_cols=343 Identities=13% Similarity=0.093 Sum_probs=211.7
Q ss_pred CCCCCCeeeeecccccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 34 VQNPTGIIQMGLAENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 34 ~~~~~~~i~L~~~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.....++++|+.|.--- ..|.+.++-.+..+..-. |++...-++.|... +..|+..||+|.+ .
T Consensus 63 ~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGa---GlssvrfIcGtq~i--Hk~LE~kiAqfh~----------r 127 (417)
T KOG1359|consen 63 KGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGA---GLSSVRFICGTQDI--HKLLESKIAQFHG----------R 127 (417)
T ss_pred eccccceeeecccccccccCChHHHHHHHHHHHHhCC---CccceeEEecchHH--HHHHHHHHHHHhC----------C
Confidence 34456788888764322 224443333332111111 12223445556544 5888999999985 4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
|+.++.+.+-.|...++.++..|.|.|+...-.+-.....++.+ . . .-.+|+-.++..+.+..+ .+
T Consensus 128 ED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLc-k------r-----y~h~dv~~l~~~l~~a~k--~r 193 (417)
T KOG1359|consen 128 EDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLC-K------R-----YRHVDVFDLEHCLISACK--MR 193 (417)
T ss_pred CceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHH-h------h-----hccchhHHHHHHHHHhhh--he
Confidence 55566677777888888899999999999988888777766654 2 0 112566667766654322 15
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
.++|+...--...|.+.|.++ |.+++++||.++++||+|+..+++... ....+...- ..+..++.++++
T Consensus 194 ~klv~TDg~FSMDGdiaPl~e---i~~La~kYgaLlfiDecHaTgf~G~tG-rGt~E~~~v-------m~~vdiinsTLg 262 (417)
T KOG1359|consen 194 LKLVVTDGVFSMDGDIAPLEE---ISQLAKKYGALLFIDECHATGFFGETG-RGTAEEFGV-------MGDVDIINSTLG 262 (417)
T ss_pred EEEEEecceeccCCCcccHHH---HHHHHHhcCcEEEEeecccceeecCCC-CChHHHhCC-------CCcceehhhhhh
Confidence 565554444568899999555 788888999999999999988666433 233333321 346678889999
Q ss_pred cccC-CCcceEEEEEecCHHHHHHH-HHhcccccCcHHH---HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 272 KDLG-LPGFRVGAIYSNDDMVVAAA-TKMSSFGLVSSQT---QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 272 K~~g-~~GlRiG~li~~~~~~~~~~-~~~~~~~~~s~~~---q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
|++| +.| ||..+|.+.+ +.+ ++.++|...+++. ...+.+++... .. -....++.+.+.+++++.++.
T Consensus 263 KAlGga~G---Gyttgp~~li-~llrqr~RpylFSnslppavV~~a~ka~dll---m~-s~~~i~~~~a~~qrfr~~me~ 334 (417)
T KOG1359|consen 263 KALGGASG---GYTTGPKPLI-SLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL---MV-SSKEIQSRQANTQRFREFMEA 334 (417)
T ss_pred hhhcCCCC---CCccCChhHH-HHHHhcCCceeecCCCChhhhhhhHHHHHHH---Hh-hHHHHHHHHHHHHHHHHHHHh
Confidence 9997 555 9999976654 444 3445554333222 11112221110 00 122334455666778888888
Q ss_pred cCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 347 AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 347 ~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
.|+++..... +.+-+-+.+. .-......++|+. ||.|..-++.. +.+...+|+.++. +++++++++++++
T Consensus 335 aGftIsg~~h-PI~pv~lGda------~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af 406 (417)
T KOG1359|consen 335 AGFTISGASH-PICPVMLGDA------RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAF 406 (417)
T ss_pred cCceecCCCC-CccceecccH------HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHH
Confidence 8998876544 4444444432 2233566778854 99998544322 2234579999877 5999999999999
Q ss_pred HHHHHhhc
Q 043923 425 KAFVDSIT 432 (469)
Q Consensus 425 ~~~l~~~~ 432 (469)
.++.+...
T Consensus 407 ~~vgr~~~ 414 (417)
T KOG1359|consen 407 SEVGRFLN 414 (417)
T ss_pred HHHHHhhc
Confidence 99887554
No 257
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.7e-16 Score=153.30 Aligned_cols=333 Identities=17% Similarity=0.199 Sum_probs=207.8
Q ss_pred CCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
+.+...+|||..| .|.+. +|.+.+++++..+. +...++ .-+.+.+.++|+.+.+.. +
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~k----------l~h~sn----~~~~~~~~~la~~L~~~s----~- 98 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEK----------LWHVSN----LFYNEPQAELAEKLVELS----P- 98 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHH----------hhhccc----ccCChHHHHHHHHHHhhC----c-
Confidence 3445568998765 66664 57777777763221 111111 112455566666665331 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc---C-C-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCcc
Q 043923 110 DTSKIVLTAGATSANETLMFCLA---E-P-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGFQ 172 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~---~-~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~~ 172 (469)
..+.|+++|+++||++.++.... . + ..+|+.....|++-...+-...|- .+..+|++
T Consensus 99 ~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn------ 172 (404)
T COG4992 99 FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN------ 172 (404)
T ss_pred cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC------
Confidence 37899999999999999998753 2 2 236777777776543221111011 12223322
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
|++++++++++ ++.+|++.--+--.|.. .+.+-++++-++|.+||+++|.||+..++--.+. ++.+-.
T Consensus 173 -Di~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk----~fA~e~ 241 (404)
T COG4992 173 -DIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK----LFAYEH 241 (404)
T ss_pred -CHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch----HHHHHH
Confidence 88999999986 88888877557777865 4667789999999999999999999998432232 221111
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh---cccccCcHHHHHHHHHHhcCchhhHHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM---SSFGLVSSQTQYLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 328 (469)
. +..+.++ ++.|.+| .|+.+|.+++. ..+...+... ++|+ .++++..++.+.|+-... +.
T Consensus 242 ~------gV~PDI~---tlaK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~-----e~ 304 (404)
T COG4992 242 Y------GVEPDIL---TLAKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFG-GNPLACAVALAVLEVLLE-----EG 304 (404)
T ss_pred h------CCCCCEE---Eeecccc-CCccceeeEEc-hhhhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcc-----hh
Confidence 0 1223333 7889999 99999999995 4444433221 2333 677777777666653221 12
Q ss_pred HHHHHHHHHHHHHHHHHhc----C-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 329 NKKRLKQRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~----g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
..+..++.-++|.+.|+++ + ++-... -|+++-+.+..... ..+++..+ +++|+++.+.. ++
T Consensus 305 ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG-~GLmiGiel~~~~~------a~~~~~~~-~~~gvL~~~a~------~~ 370 (404)
T COG4992 305 LLENVREKGEYLLQRLRELKRRYPLVKEVRG-RGLMIGIELKEPYR------ARDIVRAL-REEGVLVLPAG------PN 370 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCceeeeec-ceeEEEEEecCccc------HHHHHHHH-HHCCeEEecCC------CC
Confidence 2333344445555556554 2 111222 35888888875321 12345544 57799998653 56
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+|+.... ++++++++++++|+++++....
T Consensus 371 ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 371 VIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred eEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 89999987 4999999999999999986544
No 258
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=5.5e-16 Score=158.47 Aligned_cols=297 Identities=12% Similarity=0.038 Sum_probs=170.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCCC--cc-
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLNG--FQ- 172 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~--~~- 172 (469)
.+.+++++++++|+..+++... .....|+...-.|++.........+. .+..+|...... ..
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE 182 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 4689999999999999988632 22356777777776653322110010 112222221000 00
Q ss_pred -------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 173 -------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 173 -------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+++.++..+++.. ...++.+|++..-....|.+ .+.+.+++|.++|++||+++|+||+|.++...+..+.
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~ 261 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA 261 (433)
T ss_pred chhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh
Confidence 13455555554211 12256655554335556765 5789999999999999999999999997433333211
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhh
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~ 322 (469)
.+.. +...-+.|+||++| +|+++|+++++++ +.+.+.... .....+++++.++.+.|+....
T Consensus 262 --~~~~-----------gv~pDi~t~sK~lg-~G~pigav~~~~~-i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~- 325 (433)
T PRK08117 262 --AQTF-----------GVVPDIMTIAKGIA-SGLPLSAVVASKE-LMEQWPLGSHGTTFGGNPVACAAALATLEVIKE- 325 (433)
T ss_pred --Hhhc-----------CCCCCEeehhhhcc-CCCcceeEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 1111 11112359999999 9999999999544 444332211 1123577787777777753211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
+...+.+++..+++.+.|+++ ++.......|.++++.+..............++.. +.++||.+.+...
T Consensus 326 ----~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~g~-- 398 (433)
T PRK08117 326 ----EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDK-CLEKGLLFYLCGN-- 398 (433)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHH-HHHCCCEEeecCC--
Confidence 122333333344444444443 32222334457777877532111111122334444 4567999876321
Q ss_pred CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 399 CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 399 ~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..+.+|++++. ++++++++++++|.+++++..+
T Consensus 399 --~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 399 --AGNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred --CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 24689999754 5999999999999999976643
No 259
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=2.8e-16 Score=159.35 Aligned_cols=156 Identities=15% Similarity=0.171 Sum_probs=124.3
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~ 162 (469)
-..+|++.+|++.+ .+..++++++++|+.+++.+++++||.|+++...|......+ ... |++++.
T Consensus 65 ~~~~le~~lA~l~g----------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~-Gi~v~~ 133 (433)
T PRK08134 65 TVAVLEERVAALEG----------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRF-GIETTF 133 (433)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhC-CeEEEE
Confidence 36889999998885 234688999999999999999999999999999998765443 334 999998
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |+++++++|++ ++++|++.+|+||+|.+.+. ++|.++|+++|+++|+|.+++.... .
T Consensus 134 vd~~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~Di---~~I~~la~~~gi~livD~t~a~~~~-~-- 194 (433)
T PRK08134 134 VKPG-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLDI---PTVAAIAHEAGVPLLVDSTFTTPYL-L-- 194 (433)
T ss_pred ECCC-------CHHHHHHhcCC------CCeEEEEECCCcccCcccCH---HHHHHHHHHcCCEEEEECCCccccc-C--
Confidence 8753 68899998875 89999999999999999984 5588888999999999999864322 1
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS 286 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~ 286 (469)
.+ ..+ +..+++.|.+|.+|-+|-.+|.+++
T Consensus 195 -~p-l~~------------GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 -RP-FEH------------GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -Cc-hhc------------CCCEEEeccccccCCCCCceEEEEE
Confidence 11 112 4568889999999877877777655
No 260
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.77 E-value=1.2e-16 Score=155.18 Aligned_cols=211 Identities=18% Similarity=0.188 Sum_probs=153.3
Q ss_pred CCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 35 QNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 35 ~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
..+.+.+.|+.+.-...++.+.+++........-.|+. . ...|-...+.++-|+.+|++++ .++++|
T Consensus 39 ~~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~----~-~y~w~~~~~~E~aR~~VAklIn--------Ad~~dI 105 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHS----R-SYGWKAEDAVEAAREQVAKLIN--------ADPSDI 105 (428)
T ss_pred cCCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCc----c-ccchhhhHHHHHHHHHHHHHhC--------CCCCcE
Confidence 34556788877644443444444444321110111100 0 1112222347888999999997 678789
Q ss_pred EEeCChHHHHHHHHHHhc-CCCC----EEEEccCCCcChHHHHh---hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLA-EPGE----AFLLPTPYYPGFDRDLK---WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~-~~gd----~Vl~~~P~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|+|+|+++.++++.+. ..+| .|++..-.|++....+. .. |+++..+|++ ++...|.+.++..|++
T Consensus 106 iFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~-g~~Vt~lpv~--~~~~~d~~~~~~~i~~-- 180 (428)
T KOG1549|consen 106 VFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE-GLEVTYLPVE--DSGLVDISKLREAIRS-- 180 (428)
T ss_pred EEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhc-CeEEEEeccC--ccccccHHHHHHhcCC--
Confidence 999999999999999973 3556 89999999988765544 34 8999999988 3456789999999987
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|.+..-+|-+|+++|.+| |.++|+++++++++|.+++ .+.. .....++ +...+
T Consensus 181 ----~T~lv~I~~Vnn~~gv~~Pv~E---I~~icr~~~v~v~~DaAQa---vG~i-~vDV~el------------n~D~~ 237 (428)
T KOG1549|consen 181 ----KTRLVSIMHVNNEIGVLQPVKE---IVKICREEGVQVHVDAAQA---VGKI-PVDVQEL------------NADFL 237 (428)
T ss_pred ----CceEEEEEecccCccccccHHH---HHHHhCcCCcEEEeehhhh---cCCc-cccHHHc------------Cchhe
Confidence 9999999999999999999665 8999999999999999997 3332 2454444 44566
Q ss_pred EccCccccCCCcceEEEEEecC
Q 043923 267 VYSLSKDLGLPGFRVGAIYSND 288 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~ 288 (469)
..|.+|+||.+| +|++.+..
T Consensus 238 s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 238 SISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred eeecccccCCCc--ceEEEEcc
Confidence 679999999999 99999864
No 261
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.77 E-value=3.1e-16 Score=155.90 Aligned_cols=283 Identities=19% Similarity=0.234 Sum_probs=180.3
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---hCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---RTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~~g~~~~~v~ 164 (469)
...|+++||+..+ .+.+++++++..|+..++.+++++||.|+++...|.+....+.. ..|+++..++
T Consensus 57 ~~~le~~la~Le~----------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d 126 (386)
T PF01053_consen 57 VRALEQRLAALEG----------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVD 126 (386)
T ss_dssp HHHHHHHHHHHHT-----------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEES
T ss_pred HHHHHHHHHHhhc----------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeC
Confidence 4667777777764 57789999999999999999999999999999999887655543 1399998886
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC-eEEEEeccccccccCCCCc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN-IHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~-~~iI~Deay~~~~~~~~~~ 243 (469)
.. |++++++++++ ++++|++..|.||+..+.+ +++++++|+++| +++|+|..++..++
T Consensus 127 ~~-------d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----- 185 (386)
T PF01053_consen 127 PT-------DLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----- 185 (386)
T ss_dssp TT-------SHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT-----
T ss_pred ch-------hHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee-----
Confidence 42 78999999876 8999999999999988877 666888999998 99999999975321
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecC-HHHHHHHHHh-cccc-cCcHHHHHHHHHHhcCc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSND-DMVVAAATKM-SSFG-LVSSQTQYLLSALLSDK 319 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~-~~~~~~~~~~-~~~~-~~s~~~q~~~~~~l~~~ 319 (469)
.... ..+..+++.|++|.++ ...+=.|.+++++ ..+...++.. ...+ .+++...+.+.+-++.
T Consensus 186 ~~pL------------~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T- 252 (386)
T PF01053_consen 186 QNPL------------ELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT- 252 (386)
T ss_dssp C-GG------------GGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-
T ss_pred eccC------------cCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-
Confidence 1112 2256688999999884 3445568888765 4454443332 2233 3556666666666655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CceEEEEEecccccccCChhHHHHHHH
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS----------------NAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
+.-+.++..++...+.+.|+++ .++ |.-| .+|-.+.+.++... +....++.
T Consensus 253 ------l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~-----~~~~~f~~ 321 (386)
T PF01053_consen 253 ------LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE-----EAARRFLD 321 (386)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-----HHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-----hhhHhHHh
Confidence 3455666777888899999987 232 3222 22236677777532 11122222
Q ss_pred HHHHhCCeEE----------eCCCCCCC-----------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 382 KIVYDVKLNI----------SPGSSCHC-----------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 382 ~ll~~~GI~v----------~pg~~f~~-----------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.+ +-.++.+ .|...-.. -.++.+|||++. |+.+.+++.|+++++
T Consensus 322 ~l-~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 322 AL-KLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp H--SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred hh-hhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 22 2111111 12211000 124689999995 678888888888875
No 262
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.76 E-value=1e-15 Score=155.16 Aligned_cols=351 Identities=15% Similarity=0.093 Sum_probs=198.0
Q ss_pred CCCCCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
......+||+..+ ...+ ..+.+.+++++..+. ...... .....+.+..+|+.+.+....+-..
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~----------~~~~~~---~~~~~~~~~~lae~l~~~~~~~~~~ 97 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLAD----------DGIIHS---LDMATEAKREFLETFNEIILKPRGL 97 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhh----------ccceec---cccCcHHHHHHHHHHHHhccCccCC
Confidence 3344568898765 3334 346666766653110 000111 1111344555666654321000001
Q ss_pred CCCcEEE-eCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCc-cc
Q 043923 110 DTSKIVL-TAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGF-QI 173 (469)
Q Consensus 110 ~~~~i~~-t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~-~~ 173 (469)
.+.+++ ++++++|+..+++... ....+|+....+|++....+....|. .++.+|.+..... .-
T Consensus 98 -~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (412)
T TIGR02407 98 -DYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVD 176 (412)
T ss_pred -CceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchh
Confidence 124655 5899999999988753 23467888888888765433221121 2233333210000 01
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc-chhhhhh
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV-SIMEILK 251 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~-s~~~~~~ 251 (469)
+++.+++.+++......++.+|++..-.++.|. ..|.+.+++|.++|++||+++|+||++.++.-.+..+. ....+
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-- 254 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-- 254 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC--
Confidence 356677776532111125666665544788898 67999999999999999999999999986422221110 01111
Q ss_pred ccccccCCcCCeEEEEccCccccCCC-cceEEEEEecCHHHHHHHHHh---cccccCcHHHHHHHH---H-HhcCchhhH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDDMVVAAATKM---SSFGLVSSQTQYLLS---A-LLSDKKFTQ 323 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~~~~~~~~~~---~~~~~~s~~~q~~~~---~-~l~~~~~~~ 323 (469)
. +.+ .++||.+| + |+|+|+++++++ + ..+... .++ ..++++..++. . ++.++++ .
T Consensus 255 --------~-PDi---~~~~K~lg-~~G~pigav~~~~~-~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~~l-~ 317 (412)
T TIGR02407 255 --------E-PDI---VCLSKSIS-GYGLPLALTLIKPE-L-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSDDAF-E 317 (412)
T ss_pred --------C-CCE---EEechhcc-CCccceeEEEEchh-h-hccCCCccCCCC-CccHHHHHHHHHHHHHHhcccHH-H
Confidence 1 222 26889998 7 999999999654 3 222211 122 24455333323 3 3445444 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
+++++..++++++.+.+.+.+.. +.+.....|+++|+.++.. .....+...++ ++||.+.+...+ .+
T Consensus 318 ~~~~~~g~~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~------~~~~~~~~~~~-~~Gv~v~~~~~~----~~ 384 (412)
T TIGR02407 318 KAVQRKSEIIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDG------DLAGKIAKAAF-ENGLIIETSGPN----DE 384 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCC--ceEeeecceeEEEEEecCh------HHHHHHHHHHH-HCCCEEeccCCC----CC
Confidence 55555555555554444333321 2233445679999999742 11224555554 679999875322 35
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+|++... ++++++++++++|.+++++
T Consensus 385 ~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 385 VIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 79999987 5999999999999999864
No 263
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=1e-15 Score=156.52 Aligned_cols=350 Identities=13% Similarity=0.066 Sum_probs=196.1
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC-C
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD-T 111 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~-~ 111 (469)
...+||+..+ .+.+. .+.+.+++.+.. .....+.......+.+..+|+.+.+... .. .
T Consensus 55 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~p----~~~~ 117 (443)
T PRK06058 55 GNRLIDLGSGIAVTSVGNSAPRVVEAVREQV-------------ARFTHTCFMVTPYEGYVAVAEQLNRLTP----GDHE 117 (443)
T ss_pred CCEEEEcCcchhhhccCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 3457888765 33343 466666666531 1111122111234666677777765432 11 2
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCC--C--Ccc
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSL--N--GFQ 172 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~--~~~ 172 (469)
+.+++++++++|+..+++... ...+.|+...++|++....+....+. .+..+|.... . .+.
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLA 197 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccc
Confidence 578999999999999988432 23478999999998876443221111 1122221100 0 000
Q ss_pred cC-HHHHHHHHHHHHh--cCCceeEEEEecCCCCCC-CC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchh
Q 043923 173 IT-ETAIEEAYQLAQK--RHLKVKGVLVTNPSNPLG-TT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIM 247 (469)
Q Consensus 173 ~d-~~~l~~~i~~~~~--~~~~~~~vvl~~P~NPtG-~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~ 247 (469)
.+ .+.++..++...+ ...++.+|+ ..|.+..| .. .+.+.+++|.++|++||+++|.||++.++...+..+ . .
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a-~ 274 (443)
T PRK06058 198 TDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-A-C 274 (443)
T ss_pred cchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-H-H
Confidence 11 1222222221111 123566544 56866554 43 468899999999999999999999998753333221 1 1
Q ss_pred hhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHH
Q 043923 248 EILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNY 325 (469)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~ 325 (469)
+... ..+.++ +++|.+| .|+++|++++++ .+.+.+.... ..+..+++++.++.+.|+... +
T Consensus 275 ~~~g--------v~PDiv---~~gK~l~-~G~Pi~av~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~--~-- 337 (443)
T PRK06058 275 EHEG--------IVPDLI---TTAKGIA-GGLPLSAVTGRA-EIMDAPHPGGLGGTYGGNPVACAAALAAIETIE--E-- 337 (443)
T ss_pred HhcC--------CCCCEE---EEccccc-CCCccEEEEEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--H--
Confidence 1111 223333 5589999 999999999954 4544443221 122367888888877775321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCce-ecCCceEEEEEeccccc-ccCChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 326 ISENKKRLKQRHRKLVSGLEKA----GISC-LKSNAGLFCWVDMRHLL-RSNTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~~~----g~~v-~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
+...+..+++.++|.+.|+++ ++.. ..+.| .++.+.+.... ..........++..++ ++||.+.++..|+
T Consensus 338 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G-~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~~- 413 (443)
T PRK06058 338 -DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG-AMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTYG- 413 (443)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc-eEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCCC-
Confidence 123334444455555555543 3211 23444 55556653211 1111112233444444 6799999875543
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 400 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 400 ~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+++|+..+. ++++++++++++|++++++
T Consensus 414 ---~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 414 ---NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred ---CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 589998765 5999999999999999865
No 264
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=3.1e-17 Score=145.15 Aligned_cols=167 Identities=20% Similarity=0.246 Sum_probs=128.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH-HHHhhhCCCEEEEeecc
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD-RDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~-~~~~~~~g~~~~~v~~~ 166 (469)
+.++++.++++++ .+.+++++++|+++|+..++.++..++++|+++.|.|.++. ..+... |++++.++.+
T Consensus 2 ~~~~~~~l~~~~~--------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQ--------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELA-GAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcC--------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhc-CCEEEEeccC
Confidence 3688899999884 35788999999999999999999888999999999999888 666666 9999999987
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 167 SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
..+....+.+.+++.. .+.+++++++++|+||+|...+. ++|.++|+++|+++|+|++|..+......
T Consensus 73 ~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~---- 140 (170)
T cd01494 73 DAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG---- 140 (170)
T ss_pred CCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc----
Confidence 5443333333443322 13488999999999999999986 55888889999999999999865433211
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS 286 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~ 286 (469)
... . ..+.++++.|++|.+|. .++|++++
T Consensus 141 ~~~-~--------~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 141 VLI-P--------EGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred ccc-c--------cccCCEEEEEcccccCC--CceEEEEe
Confidence 011 0 22466888899999974 78999986
No 265
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=1.3e-15 Score=153.38 Aligned_cols=330 Identities=14% Similarity=0.126 Sum_probs=192.7
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ .+.+. .|.+.+++.+... ... +.....+.++...+|+++.+.. ..+
T Consensus 35 G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~-------------~~~-~~~~~~~~~~~~~la~~l~~~~------~~~ 94 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAE-------------KLI-NPSPAFYNEPMAKLAGLLTQHS------CFD 94 (395)
T ss_pred CCEEEECCcChhhccCCCCCHHHHHHHHHHHH-------------hcc-cccccccCHHHHHHHHHHhhcc------CCC
Confidence 4568998754 33333 3556666655311 111 1111223577788899887431 246
Q ss_pred cEEEeCChHHHHHHHHHHhc------CCC-CEEEEccCCCcChHHHHhhhCCCEEEE---eeccCCCCcc----cCHHHH
Q 043923 113 KIVLTAGATSANETLMFCLA------EPG-EAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSLNGFQ----ITETAI 178 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~------~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~~~~~----~d~~~l 178 (469)
.+++++++++|+..++..+. ++| ..|+..+..|++.........|..... .|.. .++. .|++.+
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~~l 172 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIASV 172 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHHHH
Confidence 89999999999999998874 123 568888888777543332222432111 1111 1111 367888
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccccc
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~ 257 (469)
++.+.+ ++.+|++...++..|... +.+.+++|.++|++||+++|+||++.++.-.+..+ ..+...
T Consensus 173 ~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~--a~~~~g------ 238 (395)
T PRK03715 173 EKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF--AYELSG------ 238 (395)
T ss_pred HHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh--hHhhcC------
Confidence 877753 667666664455667654 68899999999999999999999999731122211 111111
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
..+. +.+++|.+| .|+.+|.+++.++. ....... .++ ..++++..++.+.|+...- +...+.+++
T Consensus 239 --v~PD---i~t~gK~lg-~G~p~~av~~~~~i-~~~~~~~~~~T~-~g~pl~~aaala~L~~l~~-----~~l~~~~~~ 305 (395)
T PRK03715 239 --IEPD---IMTLGKGIG-GGVPLAALLAKAEV-AVFEAGDQGGTY-NGNPLMTAVGVAVISQLLA-----PGFLEGVRA 305 (395)
T ss_pred --CCCc---eeeehhhhh-CCcceEEEEEcccc-ccccCCCcCCCC-CCCHHHHHHHHHHHHHHHh-----ccHHHHHHH
Confidence 1122 247899998 78999999985543 2211111 122 2455555555555432210 123344444
Q ss_pred HHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhC---CeEEeCCCCCCCCCCCeEEEE
Q 043923 336 RHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV---KLNISPGSSCHCTEPGWFRVC 408 (469)
Q Consensus 336 ~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~---GI~v~pg~~f~~~~~~~iRi~ 408 (469)
.-++|.+.|+++ ++...... |.++.+.+.... . ..+...+.+. ||.+.+.. +..+|++
T Consensus 306 ~g~~l~~~L~~l~~~~~i~~vrG~-Glm~~i~l~~~~-------~-~~~~~~~~~~~~~Gi~~~~~~------~~~lR~~ 370 (395)
T PRK03715 306 RGEYLKEKLLELSEERGLEGERGE-GLLRALLLGKDI-------G-PQIVEKARDMQPDGLLLNAPR------PNLLRFM 370 (395)
T ss_pred HHHHHHHHHHHHhhcCCcCeEEcc-eeEEEEEecCch-------H-HHHHHHHHhccCCCEEEeecC------CCEEEEe
Confidence 445555555543 44323333 577777775310 0 1122223344 99987432 3579999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHh
Q 043923 409 FAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 409 ~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+.. ++++++++++++|++++++
T Consensus 371 p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 371 PALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred CCcccCHHHHHHHHHHHHHHHHh
Confidence 987 5999999999999999875
No 266
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.75 E-value=1.6e-15 Score=154.39 Aligned_cols=171 Identities=20% Similarity=0.300 Sum_probs=129.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCEEEEccCCCcChHHHHhhhCCC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---------AEPGEAFLLPTPYYPGFDRDLKWRTGV 158 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---------~~~gd~Vl~~~P~y~~~~~~~~~~~g~ 158 (469)
..+|++++|++++ .+++++++|+++++..++.++ +++||.|+++.|+|..+...+... |+
T Consensus 65 ~~~fe~~lA~~~g----------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~-G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLG----------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN-GL 133 (438)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc-CC
Confidence 4889999999985 346899999999999988876 478999999999999998888877 99
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV- 237 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~- 237 (469)
+++.++++. ..|.+|++.+++++++ ++++|+++++ +|... ++++|.++|++||++||+|++++...
T Consensus 134 ~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 134 VPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---DLAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---hHHHHHHHHHHCCCEEEEECccchhhh
Confidence 999999874 4678999999998865 8899888864 45443 46778999999999999999997321
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhcc
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMSS 300 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~~ 300 (469)
+.+.. .. ..+ .+.+.|| +|.+. .|- -|+++.+++.+.+.+..++.
T Consensus 201 ~~g~~---~G------------~~g-d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~ 247 (438)
T PRK15407 201 YDGRM---TG------------TFG-DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRD 247 (438)
T ss_pred cCCee---ee------------ccC-ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHH
Confidence 22211 11 112 2334555 57775 443 49999988888766554433
No 267
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.74 E-value=1.2e-15 Score=137.58 Aligned_cols=304 Identities=16% Similarity=0.199 Sum_probs=208.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
.+.++.+.+|+|++ -|.+-+|+|+.++-+++|.+++++||.|++...+|....-++... |.++..||-.
T Consensus 62 pI~~F~~dlaeFlg----------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEra-gl~v~eVp~t 130 (382)
T COG1103 62 PIKDFLEDLAEFLG----------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERA-GLNVAEVPNT 130 (382)
T ss_pred cHHHHHHHHHHHhC----------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhc-CCeEEecCCC
Confidence 35788888999986 677899999999999999999999999999998866555667777 9999999987
Q ss_pred CCCCcccCHHHHHHHHHHHHhcC-CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 167 SLNGFQITETAIEEAYQLAQKRH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~-~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
....|.++++.....|++...++ ..+.+.++++|....|...+ -++++++|+++|+.++...+|.- +. -..+
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~---Gr-mpvs 203 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV---GR-MPVS 203 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee---cc-cccc
Confidence 77789999999999999877665 45778899988766777654 67799999999999999999973 22 1234
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-c--------ccccCcHHHHHHHHHHh
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-S--------SFGLVSSQTQYLLSALL 316 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~--------~~~~~s~~~q~~~~~~l 316 (469)
..+. +..++++|-+|+++ +.-.+|.+.....+-...++.. . .++ .++... -+..++
T Consensus 204 ~ke~------------g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG-CT~rGa-pivTlm 268 (382)
T COG1103 204 GKEI------------GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG-CTVRGA-PIVTLM 268 (382)
T ss_pred cccc------------CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeec-ccccCc-hHHHHH
Confidence 3333 56688899999997 6669999988555443333322 1 122 111111 123344
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cceec--CCceEEEEEecccccc--cCChhHHHHHHHHHHHhCCe-E
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLK--SNAGLFCWVDMRHLLR--SNTFEAEMELWKKIVYDVKL-N 390 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~--~~~g~~~~v~~~~~~~--~~~~~~~~~l~~~ll~~~GI-~ 390 (469)
++-.++.+.+++.-+.++ ..+++.+.|+++| +.-.+ |...-.+.+..|.... .+... ..-+...-|++.|| -
T Consensus 269 ASfP~V~eRVkrWdeEv~-kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r-~gyFlY~ELK~RgI~G 346 (382)
T COG1103 269 ASFPHVVERVKRWDEEVE-KARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKR-KGYFLYEELKKRGIHG 346 (382)
T ss_pred hcCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcC-CceeeHHHHHhcCccc
Confidence 443443444443333343 4467888888874 54332 3322345555553210 00000 00122333566677 4
Q ss_pred EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 391 ISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.||. ..++.+|+-.++.|+++..+++++++++++
T Consensus 347 I~~G~------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 347 IQPGQ------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred cccCc------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 45553 568999997789999999999999999875
No 268
>PRK02769 histidine decarboxylase; Provisional
Probab=99.74 E-value=2.3e-15 Score=150.16 Aligned_cols=293 Identities=11% Similarity=0.076 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKI--VLTAGATSANETLMFCL--AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
.++.+.+.+++.+.++ .+++++ ++|+|+||++..++... ..+++.|+++.-.|.+....+... |++...++
T Consensus 64 ~~~e~~~~~~~a~l~g----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~V~ 138 (380)
T PRK02769 64 FDFERDVMNFFAELFK----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL-RIKSRVIT 138 (380)
T ss_pred HHHHHHHHHHHHHHhC----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc-CCCCceec
Confidence 5566666666665554 444444 88999999987666543 246789999999999999888877 99888888
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC---eEEEEeccccccccCCC
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN---IHLISDEIYSGTVFSSP 241 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~---~~iI~Deay~~~~~~~~ 241 (469)
.++ ++.+|+++|++++++. +.++.+|+++.++|+||.+-|.++ |.++|+++| +++++|.+++.+...-.
T Consensus 139 ~~~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~---I~~i~~~~g~~~~~lHVDaA~gg~~~p~~ 210 (380)
T PRK02769 139 SLP--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKE---IQEILKKIGIDDYYIHADAALSGMILPFV 210 (380)
T ss_pred cCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHH---HHHHHHHhCCCceEEEEEecccceeeccc
Confidence 864 4579999999999762 335889999999999999999655 788888998 79999999986432211
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----cc---cccCc---HHHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----SS---FGLVS---SQTQY 310 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~~---~~~~s---~~~q~ 310 (469)
......+. ..+...+..|.+|.++ ....+|.++..++.+....... .. .++-+ .+..+
T Consensus 211 ~~~~~~d~----------~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw 279 (380)
T PRK02769 211 NNPPPFSF----------ADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLW 279 (380)
T ss_pred CccccCCc----------cCCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHH
Confidence 00011111 1134556679999886 5567999998765443221100 00 11122 23333
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
++...+.. .-.++..+...+..+++.+.|++.|+++...+..+.+.++.+. + + +. .|..
T Consensus 280 ~aL~~lg~-----~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~--------~--~----~~--~~w~ 338 (380)
T PRK02769 280 AAIRSLGS-----KGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS--------E--R----IW--KKWH 338 (380)
T ss_pred HHHHHHCH-----HHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC--------H--H----HH--hCee
Confidence 33333332 2346667777778889999999889887665555667666552 0 1 12 2555
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 391 ISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.+- .+++|+++.. ++++.++++++.|.+.+....+
T Consensus 339 l~~~-------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~~ 375 (380)
T PRK02769 339 LATS-------GNQAHIITMPHHNKQQIDSLIDELIFDLKNPNK 375 (380)
T ss_pred Eccc-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhcccc
Confidence 5432 2479999866 4888999999999988875544
No 269
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=2.9e-15 Score=149.32 Aligned_cols=209 Identities=14% Similarity=0.150 Sum_probs=151.6
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~ 162 (469)
....|.+.+|++-+ .+..+++++++.|+..++.+++++||.|++....|.+....+ +.. |+++..
T Consensus 63 t~~~le~~la~LEg----------~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~-Gi~v~~ 131 (395)
T PRK08114 63 THFSLQEAMCELEG----------GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKL-GVTTTW 131 (395)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhc-CcEEEE
Confidence 35778888887653 567788888999999999999999999999998997766554 445 999988
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSS 240 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~~ 240 (469)
++. .|.+.+++++++ ++++|++.+|+||+|.+.+ +++|+++|+++ |+++++|.+++..++
T Consensus 132 vd~-------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-- 193 (395)
T PRK08114 132 FDP-------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-- 193 (395)
T ss_pred ECC-------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc--
Confidence 763 266888888865 7899999999999999998 55588888898 499999999973211
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-hcccc-cCcHHHHHHHHHHhc
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-MSSFG-LVSSQTQYLLSALLS 317 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~ 317 (469)
..+. ..+..+++.|.+|.++-+| +-.|.++.++. ..+.+.. ....+ ..++...+.+.+-|+
T Consensus 194 ---~~pl------------~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~-~~~~l~~~~~~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 194 ---FKAL------------DFGIDISIQAGTKYLVGHSDAMIGTAVANAR-CWEQLRENSYLMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred ---cCHH------------HcCCcEEEEcCcccccCCCcceeEEEEcCHH-HHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence 2222 2366789999999875454 77786666433 3232322 22222 356666665555555
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
. +.-+.++..++...+.+.|+++
T Consensus 258 T-------L~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 258 T-------LGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 4 3455666777888899999877
No 270
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=4.3e-15 Score=151.40 Aligned_cols=346 Identities=15% Similarity=0.092 Sum_probs=193.5
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ .+.+. .|.+.+++++..+. .... .+... ..+.+..+|+.+.+... -.
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~----------~~~~-~~~~~--~~~~~~~la~~l~~~~p----~~ 101 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDR----------LDHV-IFAGF--THEPAERLAQRLVALTP----GG 101 (423)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhh----------CCCc-ccccc--CCHHHHHHHHHHHHhCC----CC
Confidence 344568998766 44443 46666666653111 0001 11001 12445566666654421 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~ 170 (469)
.+.+++++++++|+..+++.... + ..+|+...-.|++....+....+- .+..++....+.
T Consensus 102 ~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 181 (423)
T PRK05964 102 LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGY 181 (423)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchh
Confidence 46899999999999999887521 2 357888888887754332211111 112222221110
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
...+++.+++.+.+ .+.++.+|++.. .+..+|... +.+.+++|.++|++||+++|+||++.++...+..+ ..+
T Consensus 182 ~~~~~~~l~~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~--a~~ 256 (423)
T PRK05964 182 EQATLDALEALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF--ACE 256 (423)
T ss_pred HHHHHHHHHHHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh--HHH
Confidence 01125667766653 123666666643 266678655 89999999999999999999999998743323211 111
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--------cccccCcHHHHHHHHHHhcCc
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--------SSFGLVSSQTQYLLSALLSDK 319 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--------~~~~~~s~~~q~~~~~~l~~~ 319 (469)
... ....+ .+++|+++ .| +++|++++ ++.+.+.+... ...+..++++..++.+.++..
T Consensus 257 ~~~--------v~pDi---~~~~K~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l 323 (423)
T PRK05964 257 QAG--------VSPDI---MCLSKGLT-GGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF 323 (423)
T ss_pred hcC--------CCCCe---eeeehhhh-cCcccceEEEE-cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH
Confidence 111 11222 37899997 55 89999888 45555544321 111124666666666665421
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec--CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCC
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK--SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSS 396 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~ 396 (469)
.- . ...++..+.-+++.+.|+++ ..+... ..-|.++.+.+...... .....+...++ ++||.+.+..
T Consensus 324 ~~-~----~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~---~~~~~l~~~l~-~~Gv~v~~~~- 393 (423)
T PRK05964 324 ED-E----PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLE---RDGPALRAFAL-ERGVLLRPLG- 393 (423)
T ss_pred Hh-c----CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcch---hHHHHHHHHHH-HCCeEEEecC-
Confidence 10 1 12233333344455555443 222211 12356666777532100 11234555554 6799998631
Q ss_pred CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 397 CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 397 f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+|++... ++++++++++++|+++++++
T Consensus 394 ------~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 394 ------NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ------CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 369999875 49999999999999999763
No 271
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=5.6e-15 Score=151.36 Aligned_cols=348 Identities=14% Similarity=0.059 Sum_probs=197.6
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE--
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL-- 116 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~-- 116 (469)
..|+|-..||..++................ | ....+-|+...-++++.+...+...+.++ ...+.+++
T Consensus 35 ~~l~liasen~~s~~v~~a~~s~~~~ky~~---G---~~g~r~~~G~~~~d~lE~~~~~~~~~~f~----~~~~~~~~nv 104 (475)
T PLN03226 35 KGLELIASENFTSRAVMEALGSCLTNKYSE---G---LPGARYYGGNEYIDQIETLCQKRALEAFR----LDPEKWGVNV 104 (475)
T ss_pred cCeeEecCCccCCHHHHHHHhhHHhccccC---C---CCCCcCcCCChhHHHHHHHHHHHHHHHhC----CCcceeEEec
Confidence 568999999988765444333222111110 0 11223344444455665533333333333 34444443
Q ss_pred -eCChHHHHHHHHHHhcCCCCEEEEccC---CCcChHHH---Hhhh-CCCE--EEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 117 -TAGATSANETLMFCLAEPGEAFLLPTP---YYPGFDRD---LKWR-TGVE--IVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 117 -t~G~~~al~~~~~~l~~~gd~Vl~~~P---~y~~~~~~---~~~~-~g~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
.++++.|+..++.+|++|||+|+..+. .|..+... .+.. .+.. ++++.++. .+..+|++++++.+.+.
T Consensus 105 ~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~- 182 (475)
T PLN03226 105 QPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLF- 182 (475)
T ss_pred CcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhc-
Confidence 366788889899999999999998553 22221111 1111 0111 22344443 34568999999988643
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++. .++ +|...+.+ +|.++|+++|+++++|+++.-.........+. .....++
T Consensus 183 ----~pklIv~~-~S~-~s~~~D~a---~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-------------~~~~Div 240 (475)
T PLN03226 183 ----RPKLIIAG-ASA-YPRDWDYA---RMRKIADKVGALLMCDMAHISGLVAAQEAASP-------------FEYCDVV 240 (475)
T ss_pred ----CCeEEEEe-cCc-CCCccCHH---HHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-------------CCCCeEE
Confidence 66765543 343 67777755 57888999999999999997443332221111 1134578
Q ss_pred EccCccccCCCcceEEEEEecCHHH-------------HHHHHHhcc--cc-cCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMV-------------VAAATKMSS--FG-LVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~-------------~~~~~~~~~--~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
++|++|++ .|.+-|++++++... ...++.... +. .++.....++.+++.... ....+..+
T Consensus 241 ~~t~hK~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~--~~~~~~~~ 316 (475)
T PLN03226 241 TTTTHKSL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKAYQ 316 (475)
T ss_pred EecCcccc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh--CcCHHHHH
Confidence 89999998 223338888854321 111221111 11 122222222333332211 11134557
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCC-ceEEEEEeccc-ccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC---CCCCeE
Q 043923 331 KRLKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRH-LLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC---TEPGWF 405 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~g~~v~~~~-~g~~~~v~~~~-~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~---~~~~~i 405 (469)
+++.++.++|.+.|.+.|+++..+. ....+++++.. .... ..+...|++.||.+..+..++. -.++.+
T Consensus 317 ~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-------~~~~~~L~~~~I~~nk~~~p~~~~~~~~~gi 389 (475)
T PLN03226 317 KQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-------SRVEKVLDLAHITLNKNAVPGDSSALVPGGV 389 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-------HHHHHHHHHCCCEECCCCCCCCcccCCCCCc
Confidence 7788888999999999999887532 24567777742 2221 2345667788999986642221 124558
Q ss_pred EEEee-----cCCHHHHHHHHHHHHHHHHhh
Q 043923 406 RVCFA-----NMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 406 Ri~~~-----~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|++.. .+++++++++.+.|.++++..
T Consensus 390 RiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 390 RIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred ccCcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 98442 257899999999999999854
No 272
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.72 E-value=2.4e-15 Score=164.13 Aligned_cols=313 Identities=12% Similarity=0.084 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCC--cEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHH---HhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTS--KIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRD---LKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~ 161 (469)
+.+.|+.+|++++ .+++ .|++|+|+|+++.+++..+ .++||.|++..-.|...... ++.. |+++.
T Consensus 80 ~e~aR~~ia~~lg--------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~-G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFN--------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEK-GAAAI 150 (805)
T ss_pred HHHHHHHHHHHhC--------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHc-CCeEE
Confidence 6788899999886 4454 5899999999999999887 67899999987777665533 2334 89998
Q ss_pred EeeccCCC------CcccC--HHHHHHHHHH-H---HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc-----C
Q 043923 162 PIQCTSLN------GFQIT--ETAIEEAYQL-A---QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK-----N 224 (469)
Q Consensus 162 ~v~~~~~~------~~~~d--~~~l~~~i~~-~---~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~-----~ 224 (469)
.++++... ...++ .+++++.++. . ...++++++|.++.-+|-||..+|.+.++.+.+.++.+ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 88876211 11222 2455554321 0 01123668999999999999999988655444433332 3
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-c----
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-S---- 299 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~---- 299 (469)
+++++|.+++ .+-. ...+..+ +..+++.|+.|.+|.| ..+|++++.++.+.. +... .
T Consensus 231 ~~v~vDaaQ~---~g~~-piDv~~~------------~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~-l~p~~~GGg~ 292 (805)
T PLN02724 231 WMVLLDAAKG---CGTS-PPDLSRY------------PADFVVVSFYKIFGYP-TGLGALLVRRDAAKL-LKKKYFGGGT 292 (805)
T ss_pred eEEEeehhhh---cCCC-CCChhhc------------CCCEEEEecceeccCC-CCceEEEEehhhhhh-hcCCccCCCc
Confidence 6899999986 2222 2333322 4567888999999723 358999886543322 1110 0
Q ss_pred ---------------------ccccCcHHHHHHHHHHhcCchhhHH-HHHHHHHHHHHHHHHHHHHHHhc-------CCc
Q 043923 300 ---------------------SFGLVSSQTQYLLSALLSDKKFTQN-YISENKKRLKQRHRKLVSGLEKA-------GIS 350 (469)
Q Consensus 300 ---------------------~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~-------g~~ 350 (469)
-.++.+.+...++.++++ ++.+ .++...++..+..+++.+.|.++ ++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~---~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~ 369 (805)
T PLN02724 293 VAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK---LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCV 369 (805)
T ss_pred eEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH---HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE
Confidence 012233333333333332 1111 13555666777778888888876 255
Q ss_pred eecCC--------ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC----------------------
Q 043923 351 CLKSN--------AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT---------------------- 400 (469)
Q Consensus 351 v~~~~--------~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~---------------------- 400 (469)
++.+. .+..+.+.+.+.. ...+. . ..+..++.++||.++.|.+|.+.
T Consensus 370 iyg~~~~~~~~~~r~~ivsFnv~~~~-~~~v~-~-~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~ 446 (805)
T PLN02724 370 LYGNHTFKLEFHIQGPIVTFNLKRAD-GSWVG-H-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHV 446 (805)
T ss_pred EcCCCCCCCCcccccCEEEEEEEcCC-CCEeC-H-HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCc
Confidence 66432 2345555554321 11110 1 22556677889999999877631
Q ss_pred -----------CCCeEEEEeecC-CHHHHHHHHHHHHHHHHhhcc
Q 043923 401 -----------EPGWFRVCFANM-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 401 -----------~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..+.+|+|++.. +.+|++++++.|++......+
T Consensus 447 c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~~~ 491 (805)
T PLN02724 447 CWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVSTPK 491 (805)
T ss_pred cCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcCCC
Confidence 137899999875 999999999999996644433
No 273
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.72 E-value=1.4e-14 Score=147.55 Aligned_cols=287 Identities=16% Similarity=0.116 Sum_probs=165.3
Q ss_pred cEEE-eCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCCCCcc-cCHH
Q 043923 113 KIVL-TAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSLNGFQ-ITET 176 (469)
Q Consensus 113 ~i~~-t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~~~~-~d~~ 176 (469)
.+++ ++++++|+..+++... ....+|+....+|++....+....| ..+..+|.+...... -|++
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 183 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLA 183 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHH
Confidence 5656 5899999999988753 2335788888888776433221101 023334432100000 2567
Q ss_pred HHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
.+++.+++......++.+|++..-....|. +.+.+.+++|.++|++||+++|+||++.++...+..+ .. +...
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~-~~~~---- 257 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SF-ERAG---- 257 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HH-hhcC----
Confidence 777777542111124566555533555675 5789999999999999999999999998742222211 11 1110
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-h-cccccCcHHHHHHHHHHh----cCchhhHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-M-SSFGLVSSQTQYLLSALL----SDKKFTQNYISEN 329 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~-~~~~~~s~~~q~~~~~~l----~~~~~~~~~~~~~ 329 (469)
..+.+ .++||.+|..|+++|++++++. +. .+.. . ...+..++++..++.+.+ .+.++ .+++
T Consensus 258 ----v~PDi---~t~~K~l~~~G~pigav~~~~~-i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l-~~~~--- 324 (425)
T PRK09264 258 ----ITPDI---VTLSKSISGYGLPMALVLIKPE-LD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAF-EKEV--- 324 (425)
T ss_pred ----CCCCE---EEeccccCCCccceEEEEEchh-hh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHH-HHHH---
Confidence 11232 3779999944999999999654 33 2221 1 111224455555444444 22222 2333
Q ss_pred HHHHHHHHHHHHHHHHh----cC-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 330 KKRLKQRHRKLVSGLEK----AG-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~----~g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
++..+++.+.|++ ++ +.......|+++++.++.. .....++..++ ++||.+.++..+ ...
T Consensus 325 ----~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~------~~~~~l~~~~~-~~Gv~~~~~~~~----~~~ 389 (425)
T PRK09264 325 ----KAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDG------ELAGKIAAEAF-ENGLIIETSGPE----DEV 389 (425)
T ss_pred ----HHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecCh------HHHHHHHHHHH-HCCCEEeccCCC----CCE
Confidence 3333334443332 32 2112233568889988642 12234555554 669999875432 357
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 405 FRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 405 iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|++... ++++++++++++|.+++++..+
T Consensus 390 lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 390 VKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8888765 4899999999999999876533
No 274
>PLN02880 tyrosine decarboxylase
Probab=99.72 E-value=1.1e-14 Score=149.84 Aligned_cols=329 Identities=9% Similarity=0.065 Sum_probs=207.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCC---CCcEEEeCChHHHHHHHHHHhcC-----------CCCEEEEccCCCcC
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFD---TSKIVLTAGATSANETLMFCLAE-----------PGEAFLLPTPYYPG 147 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~---~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~P~y~~ 147 (469)
|...+...++++.+.+|+.+.++..-... ...-++|+|+|+++..++.+..+ +.-.|++.+-+|..
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 33334568999999999998877320000 02467899999998777655421 11245567778888
Q ss_pred hHHHHhhhCCCE---EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 148 FDRDLKWRTGVE---IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 148 ~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
...++... |+. ++.||.+..+++.+|++.|+++|++....+..+-+|+.+-..-+||.+.|.+ +|+++|++||
T Consensus 194 v~Kaa~~l-Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~---eI~~i~~~~~ 269 (490)
T PLN02880 194 LQKACQIA-GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLL---ELGKIAKSNG 269 (490)
T ss_pred HHHHHHHc-CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHH---HHHHHHHHcC
Confidence 88888887 884 7888987656789999999999987655555666677777788999998855 4888999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-HHHHHHhcccc-
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV-VAAATKMSSFG- 302 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~-~~~~~~~~~~~- 302 (469)
+++++|.||++.....+. ....++. ...-.-+..+++|.++ ....+|.++..+... ...+.....+.
T Consensus 270 iwlHVDaA~gg~~~~~~~---~~~~l~g-------ie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~ 338 (490)
T PLN02880 270 MWFHVDAAYAGSACICPE---YRHYIDG-------VEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLK 338 (490)
T ss_pred CEEEEehhhHHHHHhCHH---HHHHhcC-------chhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhc
Confidence 999999999875432221 1112221 1233456679999985 778999999865332 12111100000
Q ss_pred ---------------cC-c-----HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEE
Q 043923 303 ---------------LV-S-----SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFC 360 (469)
Q Consensus 303 ---------------~~-s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~ 360 (469)
++ . .+..++. |+... .+.+.+..+...+..+++.+.+++. ++++..+.....+
T Consensus 339 ~~~~~~~~~~~~~~~~i~~~rr~~alklw~~---l~~~G--~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv 413 (490)
T PLN02880 339 NKASQANSVVDYKDWQIPLGRRFRSLKLWMV---LRLYG--VENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLV 413 (490)
T ss_pred CccccccCCCChhccCcCCCCcccHHHHHHH---HHHhC--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEE
Confidence 00 0 1111111 22212 2234444454446777888888776 7887665444566
Q ss_pred EEeccccccc-CCh-hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHHHHHHHHHHHhhcc
Q 043923 361 WVDMRHLLRS-NTF-EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 361 ~v~~~~~~~~-~~~-~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++++..... ... .-...+.+++.++..+.+.+... .+..++|+++... ++++++.+++.|.++.++...
T Consensus 414 ~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~---~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 414 CFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVL---SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred EEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7776532110 000 11134556666555666654332 2356899999763 679999999999998776643
No 275
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.72 E-value=1.5e-14 Score=142.09 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=155.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~ 162 (469)
....|.+++|.+-+ .+..+.++++..||..++.+|+++||.|+++...|.+....+ +.. |+++..
T Consensus 64 T~~~lE~~~a~LEg----------~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~-gi~~~~ 132 (396)
T COG0626 64 TRDALEEALAELEG----------GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKF-GVEVTF 132 (396)
T ss_pred cHHHHHHHHHHhhC----------CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhc-CeEEEE
Confidence 45788888888763 677899999999999999999999999999999998876554 334 888887
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.. +.+.+++++.+ +++++|++..|.||+-.+.+ +.+|+++|+++|+++|+|..|+..++-.
T Consensus 133 ~d~~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~-- 195 (396)
T COG0626 133 VDPG-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR-- 195 (396)
T ss_pred ECCC-------ChHHHHHHhcc-----cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC--
Confidence 7632 34556666542 28999999999999988877 6668888889999999999998644322
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCC-CcceEEEEEecCHHHHHHH--HHhcccc-cCcHHHHHHHHHHhcC
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAA--TKMSSFG-LVSSQTQYLLSALLSD 318 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~--~~~~~~~-~~s~~~q~~~~~~l~~ 318 (469)
.. ..+..|++.|.+|.+|- ..+=.|.++++++.+.+.+ ......+ .+++...+.+.+-++.
T Consensus 196 ---PL------------~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT 260 (396)
T COG0626 196 ---PL------------ELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRT 260 (396)
T ss_pred ---hh------------hcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch
Confidence 12 22567999999999953 3355576776777776654 2222233 3567776766666655
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.-+.++..++...+.+.|+++
T Consensus 261 -------L~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 261 -------LALRMERHNENALKIAEFLADH 282 (396)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhcC
Confidence 3445666677788888999886
No 276
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.71 E-value=2.2e-14 Score=146.61 Aligned_cols=358 Identities=13% Similarity=0.064 Sum_probs=196.0
Q ss_pred CCCCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ ...+ ..+.+.+++++... .........-..+.+.++|+.+.+..... ..
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p~~--~~ 100 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQ-------------SGLPLHTLDLTTPLKDAFIEALLNIIPKR--KM 100 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHH-------------hccCccccccCcHHHHHHHHHHHHhCCCc--CC
Confidence 344568998766 3333 34666666665311 10100000011355556666665442200 01
Q ss_pred CCc-EEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCccc--
Q 043923 111 TSK-IVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGFQI-- 173 (469)
Q Consensus 111 ~~~-i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~-- 173 (469)
... ++++++++||++.+++... .....|+...-+|++....+....|. .+..+|.. +.+..
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 178 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPF 178 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccc
Confidence 124 4556999999999988753 23457888888888875443322121 12223322 11111
Q ss_pred ------CHHH----HHHHHHHHHhcCCceeEEEEecCC-CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 174 ------TETA----IEEAYQLAQKRHLKVKGVLVTNPS-NPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 174 ------d~~~----l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+.+. +++.++.......++.++++.... |+....+|.+.++++.++|++||+++|.||++.++...+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~- 257 (442)
T TIGR00709 179 GIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT- 257 (442)
T ss_pred cCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-
Confidence 1122 233332211112356666666544 4444568999999999999999999999999998544332
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-cccccCcHHHHHHHHHHhcCchh
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSFGLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~~~ 321 (469)
+.....+ . ..+.++ ++||.+| .|+++|+++++++ +....... ...+..+++++.++.+.|+..+
T Consensus 258 ~~a~~~~-g--------v~PDiv---~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~- 322 (442)
T TIGR00709 258 MFAFEHA-G--------IEPDFV---VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK- 322 (442)
T ss_pred hhHHHHc-C--------CCCcEE---EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH-
Confidence 2222111 1 223333 3899999 5999999999655 42221111 1122367788888777775321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEeccccccc------C--ChhHHHHHHHHHHHhCCe
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRS------N--TFEAEMELWKKIVYDVKL 389 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~------~--~~~~~~~l~~~ll~~~GI 389 (469)
+ +...+..+++.++|.+.|++ +++......-|.++.+.+...... . .......+...+ .++||
T Consensus 323 -~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv 397 (442)
T TIGR00709 323 -D---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGL 397 (442)
T ss_pred -h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCe
Confidence 1 12233444444555555543 332222223457777877432100 0 001122334444 46799
Q ss_pred EEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 390 NISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 390 ~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
.+.+... ..+.+|+..+. +++++++++++++.+++++..++
T Consensus 398 l~~~~~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 398 LLETGGR----EGEVFRLLCPITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred EEeecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9976432 13579998877 49999999999999999876443
No 277
>PLN02590 probable tyrosine decarboxylase
Probab=99.71 E-value=2.9e-14 Score=146.98 Aligned_cols=330 Identities=11% Similarity=0.106 Sum_probs=210.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCC---CCCcEEEeCChHHHHHHHHHHhcC-----------CCCEEEEccCCCc
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTF---DTSKIVLTAGATSANETLMFCLAE-----------PGEAFLLPTPYYP 146 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~---~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~P~y~ 146 (469)
.|...++..++++.+.+|+.+.++..-.. ....-++++|+++++..++.+... +.-.|++.+-+|.
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~ 240 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHS 240 (539)
T ss_pred CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchH
Confidence 34445567899999999999987732100 013467789999988877665422 1225556777888
Q ss_pred ChHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 147 GFDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 147 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
++..++... |+ .++.||++..+++.+|+++|+++|++....+..+-+|+.+-..-+||.+=| +++|+++|++|
T Consensus 241 Sv~KAa~il-Glg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~ 316 (539)
T PLN02590 241 SFRKACLIG-GIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKY 316 (539)
T ss_pred HHHHHHHHc-CCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh
Confidence 888888877 87 588899886567899999999999876555556666777767788998866 56689999999
Q ss_pred CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHHHH----h
Q 043923 224 NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAATK----M 298 (469)
Q Consensus 224 ~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~~~----~ 298 (469)
|+++.+|.||++...-.+. ...+... ...-.-+..+++|.+. ....+|.++..+.. +.+.+.. +
T Consensus 317 g~WlHVDaA~GG~al~~~~---~r~~~~G-------ie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL 385 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPE---YRKFIDG-------IENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYL 385 (539)
T ss_pred CCeEEEecchhhhhhcChh---hHHHhcC-------CccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHh
Confidence 9999999999976432222 2223221 1223444569999986 77899999887643 2222211 0
Q ss_pred c-------------ccc-cC----cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEE
Q 043923 299 S-------------SFG-LV----SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLF 359 (469)
Q Consensus 299 ~-------------~~~-~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~ 359 (469)
. .+. .. ..+..+++.+.+. .+-+++..++..+..+++.+.+++. ++++..+..-..
T Consensus 386 ~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G-----~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~i 460 (539)
T PLN02590 386 EFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYG-----SENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSL 460 (539)
T ss_pred CCcccccccCCCccccCCCCCCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEE
Confidence 0 000 01 1122222333322 3345666666677778888888877 688766555456
Q ss_pred EEEeccccccc-CCh-hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHHHHHHHHHHHhhcc
Q 043923 360 CWVDMRHLLRS-NTF-EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 360 ~~v~~~~~~~~-~~~-~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+++++...... ... ....++.+++.+. |......... .+..++|+++... ++++++.+++.|.+...+..+
T Consensus 461 VcFr~~~~~~~~~~~~~ln~~l~~~l~~~-G~~~vs~t~~--~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 461 VCFRLAPVDGDEDQCNERNRELLAAVNST-GKIFISHTAL--SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEeeEE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 66665421111 000 1123455555544 5444332222 2345899999763 799999999999998887766
No 278
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.71 E-value=7.8e-15 Score=159.50 Aligned_cols=310 Identities=15% Similarity=0.125 Sum_probs=205.4
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----EEEEccCCCcChHHHHhhhC
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGAT----SANETLMFCLAEP-GE----AFLLPTPYYPGFDRDLKWRT 156 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~----~al~~~~~~l~~~-gd----~Vl~~~P~y~~~~~~~~~~~ 156 (469)
+|+.++...+.+++.+.+| .+.|.++++++ +++..+++++.++ || .|+++...|......+...
T Consensus 564 ~g~~~~~~~~r~~la~i~g------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~- 636 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITG------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMC- 636 (993)
T ss_pred HHHHHHHHHHHHHHHHHhC------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHC-
Confidence 4666555555555555544 38999999999 8999999998866 88 8999999999888888877
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|++++.+|++.+ ..+|+++|++.+++. ..++++|++++|+|-+|...+ +++|.++|+++|+++++|.++...
T Consensus 637 G~~vv~v~~d~~--G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a 708 (993)
T PLN02414 637 GMKIVVVGTDAK--GNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNA 708 (993)
T ss_pred CCEEEEeccCCC--CCcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHh
Confidence 999999999743 368999999999741 126899999999999999877 555888899999999999998531
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC----CCcceEEEEEecCHHHHHHHHH------------hc-
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG----LPGFRVGAIYSNDDMVVAAATK------------MS- 299 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~GlRiG~li~~~~~~~~~~~~------------~~- 299 (469)
... ..... ..+..+++.|.+|+|+ ..|-.+|++.+.+. +...+-. ..
T Consensus 709 ~~~---l~~p~------------~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~p~lPg~~v~~~~~~~~r~~~ 772 (993)
T PLN02414 709 QVG---LTSPG------------FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVPTGGIPRPEKT 772 (993)
T ss_pred ccC---cCCcc------------ccCCCEEEecCCccCCcCcccCCCCeeeEEEchh-hcccCCCCccccCCCcccccCC
Confidence 111 11111 2366788889999875 34456899877443 2221110 01
Q ss_pred -ccccCcH------HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEE--EEEecccccc
Q 043923 300 -SFGLVSS------QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLF--CWVDMRHLLR 369 (469)
Q Consensus 300 -~~~~~s~------~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~--~~v~~~~~~~ 369 (469)
..++++. .....+..++.... .+.+++..+....+..++.+.|.+. ++.+..+.+.+| +.++++....
T Consensus 773 s~iGt~~~a~~g~al~l~~A~~yi~~lG--~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~ 850 (993)
T PLN02414 773 QPLGTISAAPWGSALILPISYTYIAMMG--SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKN 850 (993)
T ss_pred CCcCCccchhhhhHHHHHHHHHHHHHHC--HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccccc
Confidence 0122221 11122233333322 3446666677777888899989764 444433333221 2234442111
Q ss_pred cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 370 SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
... ....++.++|+ ++||..-- ..| + .++.+||+... .+++++++++++|..+..+.++
T Consensus 851 ~~g-~~~~di~krL~-d~Gihapt-~~~-p-v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 851 TAG-IEPEDVAKRLM-DYGFHAPT-MSW-P-VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred ccC-CCHHHHHHHHH-HcCcEEee-ecc-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 101 12245778877 78998654 334 2 47789999976 3899999999999998877764
No 279
>PRK06541 hypothetical protein; Provisional
Probab=99.70 E-value=2.6e-14 Score=146.41 Aligned_cols=350 Identities=14% Similarity=0.102 Sum_probs=192.4
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ .+.+. .+.+.+++++..+ ....+.......+....+|+.+.+... ...+
T Consensus 51 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p----~~~~ 113 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAG-------------TLAFFPLWSYAHPPAIELAERLAALAP----GDLN 113 (460)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHh-------------hCcCccccccCCHHHHHHHHHHHHhCC----CCcC
Confidence 4457888765 33443 4666666665311 111111111112334445555543321 1246
Q ss_pred cEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCC---
Q 043923 113 KIVLTAGATSANETLMFCLAE--------PGEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLN--- 169 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~--- 169 (469)
.+++++++++|++.+++.... ...+|+...-+|++....+....|.. +..+|.+...
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 193 (460)
T PRK06541 114 RVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAP 193 (460)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcccccc
Confidence 899999999999998876431 13678888888877643322111211 2222221100
Q ss_pred CcccCH--------HHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 170 GFQITE--------TAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 170 ~~~~d~--------~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
.|.-+. +.+++.++.. +++..+.++..| .+++|.+. +.+.+++|.++|++||+++|.||++.++.-.
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~ 270 (460)
T PRK06541 194 ELGDDPEAFGRWAADRIEEAIEFE---GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL 270 (460)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 011122 4455554421 223334555667 88899876 4888999999999999999999999764111
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHhcc-----cccCcHHHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQYLLS 313 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~ 313 (469)
+..+ . .+... ..+.++ ++||.+| .|+ ++|+++++++........... ....++++..++.
T Consensus 271 G~~~-a-~~~~g--------v~PDiv---t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaal 336 (460)
T PRK06541 271 GEMF-G-CERFG--------YVPDII---TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVAL 336 (460)
T ss_pred chhh-h-hhhcC--------CCCCEE---Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHH
Confidence 1111 1 11111 122333 5899998 897 999999965543332211111 1124556655555
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce---ecCCceEEEEEecccccccC-Ch-----hH-H-HHHHH
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC---LKSNAGLFCWVDMRHLLRSN-TF-----EA-E-MELWK 381 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v---~~~~~g~~~~v~~~~~~~~~-~~-----~~-~-~~l~~ 381 (469)
+.|+... .+...+.++++.++|.+.|+++ ...+ .... |.++.+.+....... .+ .. . ..+..
T Consensus 337 a~l~~l~-----~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (460)
T PRK06541 337 ANLDIFE-----REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSP 410 (460)
T ss_pred HHHHHHH-----hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHH
Confidence 5544211 1123455566667777777665 2222 2233 466667764211000 00 00 1 13344
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.++ ++||.+.+.. .+...+|++... ++++++++++++|.+++++.
T Consensus 411 ~l~-~~Gi~~~~~~----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 411 ALF-EAGLYCRADD----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred HHH-hCCeEEEecC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 554 6799998631 124579999986 49999999999999999754
No 280
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.70 E-value=2.9e-14 Score=141.88 Aligned_cols=355 Identities=14% Similarity=0.067 Sum_probs=206.0
Q ss_pred CCCCCCeeeeeccccc--cC--hHHHHHHHhcCCCccccccCCccccc-ccccCCCCCCcHHHHHHHHHHHHhHcCCCCC
Q 043923 34 VQNPTGIIQMGLAENQ--LS--FDLLESWLDRNPDAAGFKRDGQSIFR-ELALFQDYHGLPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 34 ~~~~~~~i~L~~~~n~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~ 108 (469)
+.....+|||..+.+. +. .|.+.+++++..+. +. ....|..+ +-..++|+.+.....
T Consensus 52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~----------~~h~~~~~~~~----e~~v~~ae~L~~~~p---- 113 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAK----------LNHTHTRDLYY----EPYVELAEKLTALAP---- 113 (447)
T ss_pred eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHH----------hhcccCCcccc----hhHHHHHHHHHHhCC----
Confidence 3344568999985443 33 46677777663211 11 11223222 444445555443321
Q ss_pred C-CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC-------------CEEEEeecc--CCCC
Q 043923 109 F-DTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCT--SLNG 170 (469)
Q Consensus 109 ~-~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~--~~~~ 170 (469)
- ..+.+++++++++|++.+++... ..+..|+...-.|++.........| -.++.+|.. ..+.
T Consensus 114 ~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p 193 (447)
T COG0160 114 GSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCP 193 (447)
T ss_pred cccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCc
Confidence 2 35679999999999999998752 2346688888887765433211111 124444443 1121
Q ss_pred ccc--------CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 171 FQI--------TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 171 ~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
|.. ..+.++..+........++.++|+..-+.-.|. +.|.+-++++.++|++||+++|+||+..++--.+
T Consensus 194 ~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG- 272 (447)
T COG0160 194 FGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG- 272 (447)
T ss_pred ccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-
Confidence 221 123344444433333446777666644777776 5677788999999999999999999999843333
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-hcccccCcHHHHHHHHHHhcCch
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-MSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
.+..+-.. +..+.++ ++||.+| .|+.+|.++.. +.+...... ....+..++++..++.+.|+..+
T Consensus 273 ~~fa~E~~---------gv~PDiv---t~aK~ig-~G~Pl~avv~r-~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie 338 (447)
T COG0160 273 KMFAFEHF---------GVEPDIV---TLAKSLG-GGLPLSAVVGR-AEIMDWPPGGHGGTFGGNPVACAAALAVLDVIE 338 (447)
T ss_pred cchhhhhc---------CCCCCEE---Eeccccc-CCCceeEEecc-HHhcccCCcccCCCCCcCHHHHHHHHHHHHHHH
Confidence 22221111 1223444 7899999 79999999994 444442211 22223467788777777776332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceecC--CceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA--GISCLKS--NAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~~--~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
- +...++..+.-+++.+.|.++ ..+++.. --|+++.+++-..... ........++.++. ++|+.+..+
T Consensus 339 ~-----e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~ 412 (447)
T COG0160 339 E-----ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTC 412 (447)
T ss_pred H-----ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEecc
Confidence 1 123333333444455555443 1222222 2358888887643211 12233345555555 669988865
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
..+ .+.+||.... +++++++++++.|.+++++.
T Consensus 413 G~~----~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 413 GPH----GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCC----CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 433 4689999876 49999999999999998763
No 281
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.69 E-value=5.2e-14 Score=138.94 Aligned_cols=337 Identities=17% Similarity=0.175 Sum_probs=187.3
Q ss_pred CeeeeeccccccChHHHHHHHhcCC-CccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE--
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNP-DAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV-- 115 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~-- 115 (469)
..|+|-..||..++. +.+++.... ... .++ ...-.-|+...-.+++.+...+...+.|+ .+++...
T Consensus 21 ~~l~LiaSEN~~Sp~-v~~al~S~l~nky---aeg---~pg~ryy~G~~~id~iE~la~~ra~~lF~----~~~~~w~an 89 (399)
T PF00464_consen 21 STLNLIASENYMSPA-VREALGSDLTNKY---AEG---YPGKRYYGGCEYIDEIEELAIERAKELFG----AEPKEWYAN 89 (399)
T ss_dssp HSEE-CTT-----HH-HHHHHTSGGGGS----TTE---ETTEESSSSTHHHHHHHHHHHHHHHHHHT-----STTTEEEE
T ss_pred cCccccCcccccCHH-HHHHhCCcceeec---ccc---CCCcccccCcchhhHHHHHHHHHHHHHhC----CCcccceEE
Confidence 358888888886653 334433310 000 011 11122344444456666666666666666 4544333
Q ss_pred -EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---H-------hhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 116 -LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---L-------KWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 116 -~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~-------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
-..+++.|...++.+|++|||+|+..++...++... . .-. ..++++++++++ ...+|.+++++.+.+
T Consensus 90 vqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~-~~~~~~y~~d~~-~~~ID~d~l~~~a~~ 167 (399)
T PF00464_consen 90 VQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGL-YFESVPYPVDPD-TGLIDYDELEKLAKE 167 (399)
T ss_dssp ---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHH-HSEEEEEEB-TT-TSSB-HHHHHHHHHH
T ss_pred eecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccc-eEEEEeeeeecC-CCeECHHHHHHHHhh
Confidence 245677788999999999999999999877665321 1 112 467888888853 568999999999987
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
. ++++|++...+.|- .+ +.+++.++|.+.|.+++.|-+|....-.+..+++.... -.
T Consensus 168 ~-----kPklIi~G~S~y~~--~~---d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-------------AD 224 (399)
T PF00464_consen 168 H-----KPKLIICGASSYPR--PI---DFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-------------AD 224 (399)
T ss_dssp H-------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-------------SS
T ss_pred c-----CCCEEEECchhccC--cc---CHHHHHHHHHhcCcEEEecccccccceehheecCcccc-------------ce
Confidence 6 89987776433322 23 45667888889999999999996433333334444333 34
Q ss_pred EEEccCccccCCCcceEEEEEec-------------CHHHHHHHHHhcccccCc-H-HHH-HHHHHHhcCchhhHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSN-------------DDMVVAAATKMSSFGLVS-S-QTQ-YLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~-------------~~~~~~~~~~~~~~~~~s-~-~~q-~~~~~~l~~~~~~~~~~~~ 328 (469)
++.+|.+|+| +|-|-|.|++. +..+.+.+.+..-++..+ + ... .+.+.++.. ......++
T Consensus 225 vvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~e--a~~~~fk~ 300 (399)
T PF00464_consen 225 VVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKE--ALSPEFKE 300 (399)
T ss_dssp EEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHH--HTSHHHHH
T ss_pred EEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhc--ccCHHHHH
Confidence 7789999998 88899999996 366777666544333222 2 111 122222222 11222356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCCCC
Q 043923 329 NKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPG 403 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~~~ 403 (469)
..+++.++.+.|.+.|.+.|+++.. ...+..+|+++..... +...++..|++.||.+. |+.. .+..++
T Consensus 301 Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~------~g~~a~~~Le~~gI~vnkn~iP~d~-~~~~~s 373 (399)
T PF00464_consen 301 YAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGI------DGKEAEKALEEAGIIVNKNTIPGDR-SPFVPS 373 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-------HHHHHHHHHHTTEE-EEE--TTTS-TTTT-S
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEeccccc------chHHHHHHHHhcCeeecccccCCCC-CCCCCC
Confidence 6667778889999999999999874 3345678899864210 11346677889999985 4431 112346
Q ss_pred eEEEEeec-----CCHHHHHHHHH
Q 043923 404 WFRVCFAN-----MSEDTLKLSMQ 422 (469)
Q Consensus 404 ~iRi~~~~-----~~~e~i~~~l~ 422 (469)
.+||+... ..+++++++.+
T Consensus 374 GlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 374 GLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp EEEEESHHHHHTT--HHHHHHHHH
T ss_pred EEEECCHHHHhCCCCHHHHHHHHh
Confidence 79999843 25566665544
No 282
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.3e-13 Score=141.00 Aligned_cols=294 Identities=12% Similarity=0.098 Sum_probs=166.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCCC--cc-c
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLNG--FQ-I 173 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~--~~-~ 173 (469)
+.|++++++++|+..+++... .....|+...-.|++....+....+. .++.+|.+.... +. .
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 589999999999999988642 12356787787777754322111121 122333221000 00 1
Q ss_pred CH-------HHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 174 TE-------TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 174 d~-------~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
+. +.+++.++... ...++.+|++.......|.+ .+.+.+++|.++|++||+++|.||++.++...+.. .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~--~ 260 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKW--S 260 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchH--H
Confidence 11 22332222110 12367776666556667876 78999999999999999999999999864222211 1
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-cc-ccCcHHHHHHHHHHhcCchhhH
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-SF-GLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
..+... ..+. +-+++|.+| .|+++|+++++ +.+.+.+.... .+ ...++++..++.+.|+..+- .
T Consensus 261 a~~~~g--------v~pD---i~t~gK~l~-~G~p~gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~ 326 (445)
T PRK08593 261 SISHFN--------ITPD---LMSFGKSLA-GGMPMSAIVGR-KEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-E 326 (445)
T ss_pred HHHhcC--------CCCC---Eeeeccccc-CCcccEEEEEc-HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-c
Confidence 111111 1122 237899998 88999999995 44444443211 11 22566666666666543211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEeccccc--ccCChhHHHHHHHHHHHhCCeEEeCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLL--RSNTFEAEMELWKKIVYDVKLNISPGSSC 397 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~--~~~~~~~~~~l~~~ll~~~GI~v~pg~~f 397 (469)
...++.++.-++|.+.|++ +++......-|+++.+.+.... ..........++..++ ++||.+.+..
T Consensus 327 ----~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~~-- 399 (445)
T PRK08593 327 ----SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAVA-- 399 (445)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEeccC--
Confidence 1223333333444444443 3332222233566666664211 1111122334555555 6799987531
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 398 HCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 398 ~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+.+|++.+. +++++++++++++.+++++..+
T Consensus 400 ----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 400 ----GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred ----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 3479998877 4999999999999999987755
No 283
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=7.7e-14 Score=133.15 Aligned_cols=349 Identities=14% Similarity=0.156 Sum_probs=223.3
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
..|.|-..||-.++...+..-........ +| +..-+-|+...-.+++++...+..++.|+ .+--+|-..+
T Consensus 27 ~~ieLIASEN~~S~aV~~A~gS~ltnKYA---EG---yPgkRyYgGce~VD~vE~laierak~LFg----a~~anVQPhS 96 (413)
T COG0112 27 EHIELIASENFTSPAVMEAQGSDLTNKYA---EG---YPGKRYYGGCEYVDEVEELAIERAKKLFG----AEYANVQPHS 96 (413)
T ss_pred hceeeeeccccCCHHHHHHHhhhhhhccc---cC---CCCccccCCCeeHHHHHHHHHHHHHHHhC----CCccccCCCC
Confidence 45888888888776543332222111100 11 22233466565566777777777777766 5566777777
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++ |...++.+|++|||+|+-.+-.+.++..-- ... |. ++++++++.+ ...+|.|++++...+. ++|
T Consensus 97 Gs~-AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~s-G~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK 168 (413)
T COG0112 97 GSQ-ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFS-GKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPK 168 (413)
T ss_pred chH-HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCcc-ceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCC
Confidence 765 566677899999999999888877764321 111 33 5666677643 4579999999998875 999
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|+.-....| ...+ ++++.++|.+.|.++++|-+|....-.+..+++... ...++.+|.+|+
T Consensus 169 ~ii~G~SaY~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~-------------~AdvVTtTTHKT 230 (413)
T COG0112 169 LIIAGGSAYS--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP-------------HADVVTTTTHKT 230 (413)
T ss_pred EEEECccccc--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC-------------ccceEeCCcccC
Confidence 8776432222 2334 666777777999999999999533333333344332 245788999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHH-HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQ-YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
| .|-|-|.|++.+..+.+.+++.--++..+.+.+ .+++.+..-.+.++...++..+++.++.+.|.+.|.+.|+++.
T Consensus 231 l--rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vv 308 (413)
T COG0112 231 L--RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVV 308 (413)
T ss_pred C--CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEe
Confidence 8 888999999977677776665443443333222 2222222221221223456667777888999999999999887
Q ss_pred cC-CceEEEEEecccc-cccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCCCCeEEEEeec-----CCHHHHHHHH
Q 043923 353 KS-NAGLFCWVDMRHL-LRSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRVCFAN-----MSEDTLKLSM 421 (469)
Q Consensus 353 ~~-~~g~~~~v~~~~~-~~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~~~~iRi~~~~-----~~~e~i~~~l 421 (469)
.. ..+..+.+++... ... ..++.+|.+.||.+. |...-.+..++.|||.... ..++++++..
T Consensus 309 sGgTdnHl~lVDl~~~~~~G-------k~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia 381 (413)
T COG0112 309 SGGTDNHLVLVDLRSKGLTG-------KKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIA 381 (413)
T ss_pred cCCccceEEEEEcccCCCCH-------HHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHH
Confidence 53 3345667888731 122 346778889999986 3332222335679998733 3678999999
Q ss_pred HHHHHHHHhhc
Q 043923 422 QRLKAFVDSIT 432 (469)
Q Consensus 422 ~~L~~~l~~~~ 432 (469)
+-|.++++..+
T Consensus 382 ~~I~~vl~~~~ 392 (413)
T COG0112 382 DLIADVLDGLK 392 (413)
T ss_pred HHHHHHHhccc
Confidence 99999988765
No 284
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.69 E-value=2.1e-14 Score=140.28 Aligned_cols=171 Identities=17% Similarity=0.316 Sum_probs=133.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
..++.+++|+|++ ..+.+.++++|.|+.+++.+| ..|||.|+++.-+|......+... |++++.+++|
T Consensus 36 v~~FE~~~ae~~G----------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~-Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLG----------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLV-GAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHc-CCeEEEEecC
Confidence 4899999999986 667888999999999999966 589999999999999988888877 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccc
Q 043923 167 SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVS 245 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s 245 (469)
+ +.|++|++.++++|++ ++|+|+.. +-.|...+ +++|.++|++||++||+|.+++... |.+....
T Consensus 105 ~-~T~nid~~~ie~aIt~------~tKAIipV---hl~G~~~d---m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vG- 170 (374)
T COG0399 105 P-DTLNIDPDLIEAAITP------RTKAIIPV---HLAGQPCD---MDAIMALAKRHGLPVIEDAAQAHGATYKGKKVG- 170 (374)
T ss_pred C-cccCCCHHHHHHHccc------CCeEEEEe---hhccCCCC---HHHHHHHHHHcCCeEEEEcchhccCeecCcccc-
Confidence 6 5789999999999986 79998855 44566655 5557788889999999999997321 2222111
Q ss_pred hhhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhcc
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMSS 300 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~~ 300 (469)
..+ .+.+.|| +|.++ .| --|.++++++.+.+..+.++.
T Consensus 171 --------------t~G-d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~ 210 (374)
T COG0399 171 --------------SFG-DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRN 210 (374)
T ss_pred --------------ccc-ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHH
Confidence 111 2334455 79997 55 669999998888776665543
No 285
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.69 E-value=3.6e-14 Score=141.52 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=140.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH----HHHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~ 162 (469)
...+|.+.+|++.+ .+..+++++++.||.+++.+++++||.|+++.+.|.... ..+... |++++.
T Consensus 65 ~~~~lE~~la~leg----------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~-Gi~v~f 133 (384)
T PRK06434 65 TVQAFEEKYAVLEN----------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTL-GIHVDY 133 (384)
T ss_pred hHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhc-CcEEEE
Confidence 45778888888774 456788888889999999999999999999988776654 334455 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+..+.+.++. .++++|++..|+|||+.+.+ +++|.++|++++ +++|.+++.. +...+
T Consensus 134 vd~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~p 193 (384)
T PRK06434 134 IDTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQNP 193 (384)
T ss_pred ECCCChhheeecC--------------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCCc
Confidence 9876423333221 16899999999999999876 666888888998 4669997532 22221
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhc-cccc-CcHHHHHHHHHHhcCc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMS-SFGL-VSSQTQYLLSALLSDK 319 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~-~~~~-~s~~~q~~~~~~l~~~ 319 (469)
+ ..+-.+++.|.+|.++-+| .-.|.+++.++.+.+.+.... .++. .++...+.+.+-|+.
T Consensus 194 ------l----------~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t- 256 (384)
T PRK06434 194 ------L----------DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT- 256 (384)
T ss_pred ------h----------hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-
Confidence 1 1145688889999996444 446777776665555444332 3332 344444444444433
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+..+.++..++...+.+.|+.+
T Consensus 257 ------L~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 257 ------LGLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHcC
Confidence 3455556666777788888876
No 286
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=4.2e-14 Score=144.61 Aligned_cols=347 Identities=12% Similarity=0.059 Sum_probs=196.4
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ ...+. .+.+.+++.+..+. ......|- ..+.+..+|+.+.+... -..+
T Consensus 81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~----------l~~~~~~~----~~~~~~~lae~L~~~~p----~~~~ 142 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAK----------QPLHSQEL----LDPLRAMLAKTLAALTP----GKLK 142 (459)
T ss_pred CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhh----------Cccccccc----CCHHHHHHHHHHHHhCC----CCCC
Confidence 3457888766 44453 46666666653211 01111121 13445555665543321 1246
Q ss_pred cEEEeCChHHHHHHHHHHhc---C-CC-CEEEEccCCCcChHHHHhhhCCCEEEE---eeccCC---CCcccCHHHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLA---E-PG-EAFLLPTPYYPGFDRDLKWRTGVEIVP---IQCTSL---NGFQITETAIEEA 181 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~---~-~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~---v~~~~~---~~~~~d~~~l~~~ 181 (469)
.+++++++++|+..+++... . .| ..|+.....|++....+....+..... .|..+. -.| .|.+++++.
T Consensus 143 ~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~ 221 (459)
T PRK11522 143 YSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTA 221 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHH
Confidence 89999999999999988753 1 22 468888888877654332221221111 111000 001 167888888
Q ss_pred HHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCc
Q 043923 182 YQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV 260 (469)
Q Consensus 182 i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~ 260 (469)
++.....+.++.+|++..-..-.|.. .|.+.++++.++|++||+++|+||++.++.-.+.. .. .+... .
T Consensus 222 l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~-~a-~e~~g--------v 291 (459)
T PRK11522 222 LSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM-FA-CEHEN--------V 291 (459)
T ss_pred HHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh-hh-hhccC--------C
Confidence 76432223356665555435556764 57778999999999999999999999763111211 11 11111 1
Q ss_pred CCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH--h--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 261 WNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--M--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 261 ~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~--~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
.+.++ +++|.+| .| +.+|.+++.++ +.+.+.. . ...+..++++..++.+.|+..+- +...++.++
T Consensus 292 ~PDiv---t~gK~lg-gG~~Pigav~~~~~-i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-----~~l~~~~~~ 361 (459)
T PRK11522 292 QPDIL---CLAKALG-GGVMPIGATIATEE-VFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-----QNLPAQAEQ 361 (459)
T ss_pred CCCEE---Eechhhh-CCCccceeEEEcHH-HHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-----chHHHHHHH
Confidence 12222 7899998 88 69999999544 4333321 1 11112366666666555543211 122334444
Q ss_pred HHHHHHHHHHhc--CCc-e--ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 336 RHRKLVSGLEKA--GIS-C--LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 336 ~~~~l~~~L~~~--g~~-v--~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
.-++|.+.|+++ ... + .....|.++.+.+... .....++..++ ++||.+.+.. .....+|+..+
T Consensus 362 ~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~------~~~~~i~~~l~-~~Gvl~~~~~----~~~~~lr~~Pp 430 (459)
T PRK11522 362 KGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN------EIGYNFASEMF-RQRVLVAGTL----NNAKTIRIEPP 430 (459)
T ss_pred HHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc------hHHHHHHHHHH-HCCeEEEecC----CCCCEEEEECC
Confidence 445555555543 121 1 1112357887887532 11224555555 5799997542 12467999987
Q ss_pred c-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 411 N-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 411 ~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. ++++++++++++|.+++++..+
T Consensus 431 l~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 431 LTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 6 5999999999999999987766
No 287
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=2.8e-14 Score=144.76 Aligned_cols=210 Identities=17% Similarity=0.253 Sum_probs=142.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~v 163 (469)
...+++.+|++++ ..+.|++++|. .|+.+++.+++++||+|+++...|.+... .+... |+++..+
T Consensus 71 ~~~le~~la~l~g---------~~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 139 (437)
T PRK05613 71 VEALENRIASLEG---------GVHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRL-GIEVTFV 139 (437)
T ss_pred HHHHHHHHHHHhC---------CCeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhc-CeEEEEE
Confidence 4778888888875 23445555555 88888888888999999999999987742 33555 9999988
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+ +. .|++.+++++++ ++++|++..|.||+|.+.+ +++|.++|+++|+++|+|.+++....
T Consensus 140 d-~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----- 199 (437)
T PRK05613 140 E-NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----- 199 (437)
T ss_pred C-CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc-----
Confidence 7 32 277889988875 7889999999999999888 55588888899999999999863211
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe-cCHH--------------------------------
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS-NDDM-------------------------------- 290 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~-~~~~-------------------------------- 290 (469)
.....+ +..+++.|++|.++-.|--+|-+++ +...
T Consensus 200 ~~p~~~------------GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (437)
T PRK05613 200 VRPLEL------------GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGA 267 (437)
T ss_pred cChHHh------------CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccch
Confidence 111122 4568889999999755655555444 2110
Q ss_pred ---HHHHH-HHhcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 291 ---VVAAA-TKMSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 291 ---~~~~~-~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+.+.. ......+ ..++...+.+.+-|+. +.-+.++..++...+.+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-------L~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 268 PAFGLKARAGLLRDTGATLSPFNAWVTAQGLDT-------LSLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 00011 1112222 3556665555555544 3445566677888899999887
No 288
>PLN02271 serine hydroxymethyltransferase
Probab=99.68 E-value=1.1e-13 Score=140.26 Aligned_cols=308 Identities=14% Similarity=0.079 Sum_probs=193.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCC----CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH-----
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDT----SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----- 152 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~----~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----- 152 (469)
|+....++++.....+...+.|+ .+. -+|-.- +++.|+.+++.+|++|||+|+..+..|.++....
T Consensus 186 y~G~~~iD~iE~la~era~~lF~----~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~ 260 (586)
T PLN02271 186 YTGNQYIDQIERLCCERALAAFG----LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPG 260 (586)
T ss_pred CCCChhHHHHHHHHHHHHHHHhC----Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccccc
Confidence 44445556676666666666655 333 455555 5666778888999999999999888777764321
Q ss_pred ----hhhCCCEEEEee--ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q 043923 153 ----KWRTGVEIVPIQ--CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIH 226 (469)
Q Consensus 153 ----~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~ 226 (469)
... |+.+..+| ++. ....+|.+++++.... .++++|++..-.+| ..++.+ ++.++|+++|++
T Consensus 261 g~~vs~s-G~~~~~vpY~~d~-~~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D~~---~i~eIAdevGA~ 328 (586)
T PLN02271 261 GKKVSGA-SIFFESLPYKVNP-QTGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWDYA---RFRQIADKCGAV 328 (586)
T ss_pred ccccccc-cceEEEEEccccc-ccCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCCHH---HHHHHHHHcCCE
Confidence 222 65555444 543 3456899999985433 28998888766777 556655 477788899999
Q ss_pred EEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH-----------------
Q 043923 227 LISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD----------------- 289 (469)
Q Consensus 227 iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~----------------- 289 (469)
+++|.++.........+++.. ....++.+|.+|++ .|-|-|.|++.+.
T Consensus 329 LmvD~AH~aGLIa~g~~~sP~-------------~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~ 393 (586)
T PLN02271 329 LMCDMAHISGLVAAKECVNPF-------------DYCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNS 393 (586)
T ss_pred EEEECcccccccccCcCCCCC-------------cCCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccc
Confidence 999999974433332222211 13457889999998 5667788887542
Q ss_pred --HHHHHHHHhccccc-CcHH--HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEe
Q 043923 290 --MVVAAATKMSSFGL-VSSQ--TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVD 363 (469)
Q Consensus 290 --~~~~~~~~~~~~~~-~s~~--~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~ 363 (469)
.+.+.+....-++. .++. ...+.+..+..... .++ +...+++.++.+.|.+.|.+.|+++.. ...+..++++
T Consensus 394 ~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~-~ef-k~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvD 471 (586)
T PLN02271 394 HYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVAT-PEY-KAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWD 471 (586)
T ss_pred cHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhC-hHH-HHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeec
Confidence 12232322211121 1111 12222333332111 222 455667777889999999999998764 3445678889
Q ss_pred cccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC---CCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHH
Q 043923 364 MRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH---CTEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 364 ~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~---~~~~~~iRi~~~~-----~~~e~i~~~l~~L~~~l~ 429 (469)
+...- . ....+++.|++.||.+.--..++ +..++.+||+... ..++++++..+-|.++++
T Consensus 472 l~~~g-~-----~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 472 LTTLG-L-----TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccC-C-----CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 86421 0 11356788889999885322221 2235679998743 367999999988888887
No 289
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=1.5e-14 Score=143.15 Aligned_cols=286 Identities=15% Similarity=0.140 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhHcCCCCCC-CCCcEEEeCC-hHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEeec
Q 043923 90 AFKKALVEFMSEIRGNKVTF-DTSKIVLTAG-ATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~-~~~~i~~t~G-~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v~~ 165 (469)
++-+.+.+.+++.++ . +...|++++| +|+|+++++..+..+||++++..-+..+. ...++.. |+ +..+..
T Consensus 37 ~~~~~~~~~l~~l~~----~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~-g~-~~~~~~ 110 (349)
T TIGR01364 37 AVANEAESDLRELLN----IPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKY-GV-VNVVAS 110 (349)
T ss_pred HHHHHHHHHHHHHhC----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CC-cEEEec
Confidence 444444444444433 3 2346877776 99999999999998999888776654332 3445555 88 666665
Q ss_pred cCCCCc--ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 166 TSLNGF--QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 166 ~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+...+| .+++++++. .+++++|.+++-.+.||...+ ++++.+++++++|.+.+ ++..+
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss---~g~~~- 170 (349)
T TIGR01364 111 GKEGNYTKIPDPSTWEI--------SEDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSN---ILSRP- 170 (349)
T ss_pred cccCCCCCCCCHHhcCC--------CCCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcccc---ccCcc-
Confidence 422222 244454441 137899999999999999875 45556899999999987 44433
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHH---------H----HhcccccCcHHHHH
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAA---------T----KMSSFGLVSSQTQY 310 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~---------~----~~~~~~~~s~~~q~ 310 (469)
..+..+ + +++.|..|.+|.|| +|.++.+++.+.+.. . ....+++++....+
T Consensus 171 id~~~~------------d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~ 234 (349)
T TIGR01364 171 IDVSKF------------G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIY 234 (349)
T ss_pred CCHHHc------------c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHH
Confidence 333222 3 77889999999666 788888665543210 0 01223445555555
Q ss_pred HHHHHhcCchhhHH-HHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CceEEEEEecccccccCChhHHHHHHHHHH
Q 043923 311 LLSALLSDKKFTQN-YISENKKRLKQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLRSNTFEAEMELWKKIV 384 (469)
Q Consensus 311 ~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll 384 (469)
++.++|+... +. -++.+.++.++..+++++.|+++ |+..... .+...+.+.+++. ....++.. .+
T Consensus 235 al~~al~~l~--~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~-~~ 305 (349)
T TIGR01364 235 VSGLVFKWLK--EQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------ELEKRFLK-EA 305 (349)
T ss_pred HHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh------hHhHHHHH-HH
Confidence 5555554221 11 26778888889999999999998 5533311 2324455666532 11123333 44
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+.|+.+.+|.. ..+.+|+|+.. .+++|++.++++|++++++
T Consensus 306 ~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 306 EERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 567997777754 23589999976 4899999999999998764
No 290
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.68 E-value=9.8e-14 Score=135.65 Aligned_cols=336 Identities=15% Similarity=0.160 Sum_probs=207.0
Q ss_pred CCCeeeeecccccc----ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAENQL----SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+--++ .+|.+.+++++. ...-..|+.+ .++.-.+|+.+.++.+ ..|
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~-------------l~~G~~fg~P---te~Ei~~Aell~~~~p-----~~e 110 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQ-------------LERGLSFGAP---TELEVELAELLIERVP-----SIE 110 (432)
T ss_pred CCEeeehhccCcccccCCCCHHHHHHHHHH-------------HHhcCCCCCC---CHHHHHHHHHHHHhcC-----ccc
Confidence 34578877664443 246678877764 2334567655 3666777788776633 458
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC-------------------CEEEEeeccCCCCc
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG-------------------VEIVPIQCTSLNGF 171 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g-------------------~~~~~v~~~~~~~~ 171 (469)
.|-++|++|||...+++... ...|+|+..+-+|++....+....| ..++.+|++
T Consensus 111 ~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN----- 185 (432)
T COG0001 111 KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN----- 185 (432)
T ss_pred EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----
Confidence 99999999999999887752 2458899999999887665443212 123344433
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecC--CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNP--SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
|++.+++++++. +.++.+|++. | .| -|.+ ..++-+++|.++|++||+++|.||+..++...-........
T Consensus 186 --D~~al~~~~~~~---g~~IAaVIvE-Pv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~g 258 (432)
T COG0001 186 --DLEALEEAFEEY---GDDIAAVIVE-PVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYG 258 (432)
T ss_pred --CHHHHHHHHHHc---CCcEEEEEec-cccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccC
Confidence 789999998763 3356665544 5 45 5664 45667899999999999999999999875444232234333
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----ccccCcHHHHHHHHHHhcCchh--
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----SFGLVSSQTQYLLSALLSDKKF-- 321 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~-- 321 (469)
+.++ +.+++|..| .|+.+|.+-+ .+++.+.+.... ...+.++++..+..+.|.....
T Consensus 259 i~PD--------------lttlGKiIG-GGlP~ga~gG-r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 259 VEPD--------------LTTLGKIIG-GGLPIGAFGG-RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred cCcc--------------hhhhhhhhc-CCcceeeecc-HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc
Confidence 4321 348999999 9999999988 444544332221 1122466777776666553221
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC-ceEEEEEecccc-c----c--cCChhHHHHHHHHHHHhCCeEEe
Q 043923 322 -TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRHL-L----R--SNTFEAEMELWKKIVYDVKLNIS 392 (469)
Q Consensus 322 -~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~-~g~~~~v~~~~~-~----~--~~~~~~~~~l~~~ll~~~GI~v~ 392 (469)
+.+++.+.-+ +.++-|.+.+.++|+++.... +++|- +-+... . + ..+.+.-..+...+| +.||.+.
T Consensus 323 ~~y~~l~~~~~---~L~~gl~~~~~~~g~~~~v~~~gsm~~-i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ 397 (432)
T COG0001 323 GVYERLDALGE---RLAEGLRAAAERHGIPLTVNRVGSMFG-IFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLA 397 (432)
T ss_pred cHHHHHHHHHH---HHHHHHHHHHHHhCCCeEEeeecceEE-EEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccC
Confidence 1222222222 222334455556677765433 33332 222221 1 0 011122345566666 5599999
Q ss_pred CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 393 PGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 393 pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
|+.+ ...=+|.. +++++|++.++++.+++++..+
T Consensus 398 ps~~------ea~flS~a-hte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 398 PSQF------EAGFLSTA-HTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred Cccc------cceeeecc-cCHHHHHHHHHHHHHHHHHhhc
Confidence 8742 12346666 4999999999999999887653
No 291
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.67 E-value=9.3e-14 Score=136.83 Aligned_cols=350 Identities=15% Similarity=0.161 Sum_probs=226.9
Q ss_pred Ceeeeecccccc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
-+|||-+..-.- |.+...+++... ...|........|.+.+++.++ .+.+++|
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~G----------------DD~Y~gdpSv~~Lee~vael~G----------~E~alpt 95 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMRG----------------DEAYSGSRSYYALAESVKNIFG----------YQYTIPT 95 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHcC----------------CcccccCchHHHHHHHHHHHhC----------CceEEEC
Confidence 469999888774 777777776652 2358777788999999999986 4567888
Q ss_pred CChHHHHHHHHHHhcC-CCCEEEEccC-------C-CcChHHHHhhhCCCEEEEeecc--------CCCCcccCHHHHHH
Q 043923 118 AGATSANETLMFCLAE-PGEAFLLPTP-------Y-YPGFDRDLKWRTGVEIVPIQCT--------SLNGFQITETAIEE 180 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~-~gd~Vl~~~P-------~-y~~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l~~ 180 (469)
..+..+-.+++..+++ +||.+.+..+ . |......+... |+.++.++.+ ......+|++.+++
T Consensus 96 hqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~-G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~ 174 (467)
T TIGR02617 96 HQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQIN-GCTARNVYTKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_pred CCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHc-CceeecccchhhcccccCCCCCCCcCHHHHHH
Confidence 8889999999999988 6776665443 2 22222334445 9888876432 12234689999999
Q ss_pred HHHHHHhcCCceeEEEEecCCC-CCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc--ccc-----CCCCccchhhhhhc
Q 043923 181 AYQLAQKRHLKVKGVLVTNPSN-PLGTTMSRNELNLLVNIITEKNIHLISDEIYSG--TVF-----SSPGFVSIMEILKD 252 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~~P~N-PtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~--~~~-----~~~~~~s~~~~~~~ 252 (469)
+|++... .++..+...--+| -.|+++|.+.++++.++|++||+.++.|.+-.. -+| ....-.++.++..+
T Consensus 175 ~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE 252 (467)
T TIGR02617 175 GIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRE 252 (467)
T ss_pred HHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHH
Confidence 9975311 1222222111123 358999999999999999999999999987641 011 01112455555432
Q ss_pred cccccCCcCCeEEEEccCccccCCC-cceEEEEEecCH---HHHHHHHH-------hcccccCcHHHHHHHHHHhcCchh
Q 043923 253 RNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDD---MVVAAATK-------MSSFGLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 253 ~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~---~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~ 321 (469)
+ ...-..+..|+||.+|+| | |++.++++ .+.+..+. +.+++..+.-...+++.-|.+.-.
T Consensus 253 ~------~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~ 323 (467)
T TIGR02617 253 T------YKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN 323 (467)
T ss_pred h------hccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc
Confidence 2 112334456999998866 4 56666666 33232222 234555666666666655665432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccc---ccCChhHHHHHHHHHHHhCCeEEe-CCCC-
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLL---RSNTFEAEMELWKKIVYDVKLNIS-PGSS- 396 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~---~~~~~~~~~~l~~~ll~~~GI~v~-pg~~- 396 (469)
.+++..+..++ ++|.+.|.+.|+++.. .||.-++++..... .... .....++.+|..+.||.-. -|+.
T Consensus 324 -~~yl~~ri~qv----~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~-fpa~al~~~ly~~~GiR~~e~G~~~ 396 (467)
T TIGR02617 324 -LDWLAYRINQV----QYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQ-FPAHALACELYKVAGIRAVEIGSLL 396 (467)
T ss_pred -HHHHHHHHHHH----HHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhh-CcHHHHHHHHHHHcCcceEeeccee
Confidence 45555544433 7788899999999988 88888888765532 2222 3445788888889999643 2332
Q ss_pred CCCC---------CCCeEEEEeec-C-CHHHHHHHHHHHHHHHHhhcc
Q 043923 397 CHCT---------EPGWFRVCFAN-M-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 397 f~~~---------~~~~iRi~~~~-~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++.+ .-..+|+++.. + |.+.++...++|..+.++...
T Consensus 397 ~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 397 LGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred cccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 1110 12479999976 3 999999999999998876554
No 292
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.67 E-value=5.6e-15 Score=139.79 Aligned_cols=299 Identities=13% Similarity=0.117 Sum_probs=196.9
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
..+|++.+|++++ .+..++.++.--|....+..|. -||=.|+...-.+-.+...++.. ++.-+-+..
T Consensus 218 hv~LE~eLA~LHq----------K~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns-~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQ----------KEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNS-RVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhc----------CcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhc-CCcceeecc
Confidence 4667777777765 2223333333333333333332 27777777777777777667665 665555543
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
+ |++.|++.+++.... .+|+|-...-+..+|.+-|.|| |.+++++||.+-++||+++-..|+... ..
T Consensus 287 N-------D~~hL~~lL~~~~~s--vPKivAFEtVhSM~Gavcplee---lcDvah~yGAiTFlDEVHAVGlYG~rG-aG 353 (570)
T KOG1360|consen 287 N-------DLDHLEQLLQSSPKS--VPKIVAFETVHSMDGAVCPLEE---LCDVAHKYGAITFLDEVHAVGLYGPRG-AG 353 (570)
T ss_pred C-------CHHHHHHHHHhCCCC--CCceEEEeeeeccCCCcCCHHH---HHHHHHHhCceeeeehhhhhccccCCC-CC
Confidence 3 789999988764332 5777878888999999999666 899999999999999999866565432 12
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-cccc---CcHHHHHH---HHHHhcC
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-SFGL---VSSQTQYL---LSALLSD 318 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-~~~~---~s~~~q~~---~~~~l~~ 318 (469)
+.+. +.+ .....|+.+++.|+||+-| |||.+.... .+-++.+. .|.. .++..... +.++|+.
T Consensus 354 vger-dGv------m~kvDiIsGTLgKafGcVG---GYIAat~~L-vDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~ 422 (570)
T KOG1360|consen 354 VGER-DGV------MHKVDIISGTLGKAFGCVG---GYIAATRKL-VDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS 422 (570)
T ss_pred cccc-CCc------chhhhhcccchhhhccccc---ceehhhhhH-HHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh
Confidence 2111 100 2345788899999999988 999885544 44444432 3321 22322222 2233433
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
.+ -...|+..+++.+++++.|.+.|++|.+.++ .++-+.+.+... ..+.+..|+.++||+|..-.+..
T Consensus 423 ~e-----g~~lR~~hqrnv~~~kq~l~~~GiPVi~~pS-HIiPv~vgda~l------~~~~sd~Li~~h~iYvQaINyPT 490 (570)
T KOG1360|consen 423 EE-----GRVLRRQHQRNVKYVKQLLMELGIPVIPNPS-HIIPVRVGDAAL------AKQASDILISKHNIYVQAINYPT 490 (570)
T ss_pred hh-----hHHHHHHHHHHHHHHHHHHHHcCCcccCCCc-ceeeeeccCHHH------HHHHHHHHHHhcCeEEEeccCCc
Confidence 22 2445666777888999999999999998777 566677665322 23577889999999998655433
Q ss_pred C-CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 399 C-TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 399 ~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. -+...+||+.+- .+++.++.+++.|..++++..=
T Consensus 491 V~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 491 VARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred ccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 2 245579998764 4889999999999998876654
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.67 E-value=1.1e-13 Score=140.51 Aligned_cols=336 Identities=12% Similarity=0.058 Sum_probs=189.5
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ .+.+. .|.+.+++.+.... ......|-. .+.+..+|+.+.+... -..+
T Consensus 74 G~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~----------l~~~~~~~~----~~~~~~lAe~L~~~~p----~~~~ 135 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK----------QPLHSQELL----DPLRALLAKTLAALTP----GKLK 135 (442)
T ss_pred CCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh----------CCCcccccC----CHHHHHHHHHHHHhCC----CCcC
Confidence 3457888766 55553 46666666653111 111112211 3444555555543321 1236
Q ss_pred cEEEeCChHHHHHHHHHHhcC-----CCCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCCcccCH
Q 043923 113 KIVLTAGATSANETLMFCLAE-----PGEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNGFQITE 175 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~-----~gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~d~ 175 (469)
.++++++++||++.+++.... ....|+.....|++....+....+-. +..+|. .|.
T Consensus 136 ~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~ 208 (442)
T TIGR03372 136 YSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDI 208 (442)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCH
Confidence 799999999999999886531 23578888888877653332221211 112221 256
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
+.+++.++.....+.++.+|++..-....|... |.+-++++.++|++||+++|+||++.+ |+.....-..+...
T Consensus 209 ~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG--~GRtG~~~a~e~~g--- 283 (442)
T TIGR03372 209 EAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTG--MGRTGKMFACEHEG--- 283 (442)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccC--CCccccchhhhhcC---
Confidence 777777754322233566666553355567654 688899999999999999999999976 43211010111111
Q ss_pred cccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh----cccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM----SSFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
..+.++ +++|.+| .| +.+|.+++. +.+.+.+... .+.+..++++..++.+.|+-.+- . ..
T Consensus 284 -----v~PDiv---t~gK~lg-~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~----~l 348 (442)
T TIGR03372 284 -----VQPDIL---CLAKALG-GGVMPIGATIAT-EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-K----NL 348 (442)
T ss_pred -----CCCCee---eehhhhc-CCcccceEEEec-HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-c----cH
Confidence 122333 5899998 88 699999985 4454444211 11122466666666665543210 0 11
Q ss_pred HHHHHHHHHHHHHHHHhc----C-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 330 KKRLKQRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~----g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
.+..++.-+++.+.|+++ + .-......|.++.+.+... .....++..++ ++||++.+... ..+.
T Consensus 349 ~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~------~~~~~i~~~l~-~~Gvl~~~~~~----~~~~ 417 (442)
T TIGR03372 349 PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN------EIGYAFAKELF-QQNILVAGTLN----NAKS 417 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh------HHHHHHHHHHH-HCCcEEeecCC----CCCE
Confidence 222233334444444432 2 1111123467888887632 11234556655 57999975321 1357
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 405 FRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 405 iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
+|+.... ++++++++++++|.+++
T Consensus 418 lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 418 IRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEECCcccCHHHHHHHHHHHHHhC
Confidence 9998876 49999999999998764
No 294
>PLN03032 serine decarboxylase; Provisional
Probab=99.67 E-value=6.3e-14 Score=138.89 Aligned_cols=287 Identities=12% Similarity=0.075 Sum_probs=187.7
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKI--VLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i--~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
..++.+.+.+++.+.++ .+++++ ++|+|+||++..++.+.. .++..|++..-.|.+...+++.. |+.+..+
T Consensus 64 a~~~e~~v~~~ia~llg----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l-g~~~~~V 138 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMEAVKV 138 (374)
T ss_pred HHHHHHHHHHHHHHHhC----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc-CCCCeEe
Confidence 46777777777766655 566766 999999999998887653 24567888888899999888877 8888889
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC-----eEEEEecccccccc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN-----IHLISDEIYSGTVF 238 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~-----~~iI~Deay~~~~~ 238 (469)
|.+. ++.+|+++|+++|++. ..++.+|+++..+|+||.+-|.++ |+++|+++| +++++|.+|+....
T Consensus 139 ~~d~--~g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idpi~e---I~~i~~~~g~~~~~~~lHvDaA~gg~~~ 210 (374)
T PLN03032 139 PTLP--SGEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDDLDR---ILRILKELGYTEDRFYIHCDGALFGLMM 210 (374)
T ss_pred eeCC--CCcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCCHHH---HHHHHHHhCCCCCCeeEEEEccchhhhh
Confidence 8874 4579999999999752 124667788888999999988555 788888986 58999999976422
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc-------cCc-----H
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-------LVS-----S 306 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~-------~~s-----~ 306 (469)
.-....+...+ ..+...+..|.+|.+| ....+|.++..++.+.. +.....+. ..| +
T Consensus 211 p~~~~~~~~~~----------~~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~-~~~~~~Yl~~~d~ti~gSR~g~~~ 278 (374)
T PLN03032 211 PFVSRAPEVTF----------RKPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKA-LSQNVEYLNSRDATIMGSRNGHAP 278 (374)
T ss_pred hccCCCcccCC----------CcCCcEEEECcccccC-CCcCeEEEEEEchhhHh-hccCCcccCCCCCcccCCCchHHH
Confidence 10000011111 1123445669999887 55789999987654432 21111110 011 2
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHh
Q 043923 307 QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYD 386 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~ 386 (469)
+..++....+. .+-+.+..++..+..+++.+.|++.++++...+-.+.+.+..+.. ..+.
T Consensus 279 l~~w~~l~~~G-----~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~~-------------~~~~-- 338 (374)
T PLN03032 279 LYLWYTLRRKG-----YRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPMD-------------EAFI-- 338 (374)
T ss_pred HHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCCc-------------HhHh--
Confidence 22233322222 333466667777788889999998888765443335565655520 1122
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
.|..+.+- .+.+|+++.. ++++.++++++.|++
T Consensus 339 ~~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 KKWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred heeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 25555421 2479999876 578889998888765
No 295
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=4.9e-14 Score=141.53 Aligned_cols=289 Identities=12% Similarity=0.042 Sum_probs=180.2
Q ss_pred cHHHHHHHHHHHHhHcCCCCCC-CCCcEEEeC-ChHHHHHHHHHHhcCC-CCEEEEccCCCcChHHH-H-hhhCCC-EEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTF-DTSKIVLTA-GATSANETLMFCLAEP-GEAFLLPTPYYPGFDRD-L-KWRTGV-EIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~-~~~~i~~t~-G~~~al~~~~~~l~~~-gd~Vl~~~P~y~~~~~~-~-~~~~g~-~~~ 161 (469)
+.+.|+.++++++ + ++++|+++. |+|++++.++..++++ ++.|+. +-.|+.-... + +.. |+ ++.
T Consensus 50 ~~~~r~~l~~l~~--------~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~-g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLS--------LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQL-KLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhc-CCCCce
Confidence 4566667777765 3 345788775 8999999999999875 444444 4445443222 2 344 88 888
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+. +..+|+++++ .++.|.+++-+|.||..++.++ |++ +++|+++|+|.+.+ ++..
T Consensus 120 ~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~pi~~---I~~--~~~g~~~vVDa~qs---~G~~ 178 (378)
T PRK03080 120 VLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVPVAR---WIG--ADREGLTICDATSA---AFAL 178 (378)
T ss_pred EeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceeccchh---hcc--ccCCCeEEEecccc---cccC
Confidence 887652 3346665532 2456888888999999999666 555 67899999999987 4443
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH----------------------hc
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK----------------------MS 299 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~----------------------~~ 299 (469)
+ ..+. +..+++.|..|+++ +...+|+++.+++.+...... ..
T Consensus 179 p-idv~--------------~iD~~~~s~~K~l~-~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (378)
T PRK03080 179 P-LDWS--------------KLDVYTFSWQKVLG-GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFK 242 (378)
T ss_pred C-CCHH--------------HCcEEEEehhhhCC-CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhc
Confidence 3 2222 23477889999986 334588888865544331110 00
Q ss_pred --ccccCcHHHHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhcC-CceecC----CceEEEEEeccccccc
Q 043923 300 --SFGLVSSQTQYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKAG-ISCLKS----NAGLFCWVDMRHLLRS 370 (469)
Q Consensus 300 --~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~----~~g~~~~v~~~~~~~~ 370 (469)
.+++.+.....++.++|+. +.+ -++...++.++..+++.+.|++++ +++..+ .++..+.+.+++. .
T Consensus 243 ~~t~~tp~i~~i~~l~~al~~---l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~-~- 317 (378)
T PRK03080 243 GQTINTPSMLTVEDYLDQLDW---ANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA-Q- 317 (378)
T ss_pred CCcccCchHHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc-h-
Confidence 1111222333232333321 121 146667778888888999998885 454421 2333555666640 0
Q ss_pred CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 371 NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 371 ~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. ..+.++...++++ ||.+..|... . ..+.+|+|+.. .+++++++++++|++++++.+.
T Consensus 318 -~-~~~~~~~~~l~~~-~i~v~~g~~~-~-~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 318 -A-AVDAAAVAKLLRE-NGAVDIEPYR-D-APNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred -H-HHHHHHHHHHHHc-CCeecccccc-C-CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 0 0112355666654 8888876532 1 34689999976 4999999999999999887654
No 296
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=2.1e-13 Score=139.19 Aligned_cols=309 Identities=14% Similarity=0.092 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC---------
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV--------- 158 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~--------- 158 (469)
+....+|+.+.+.... -..+.+++++++++|+..+++... ...++|+...-+|++....+....+.
T Consensus 97 ~~~~~lAe~L~~~~p~---~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 97 EPAVELAERLVEIAPG---GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred HHHHHHHHHHHHhCCC---CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 4456667766543210 013689999999999999987642 23467888888887765332211111
Q ss_pred ----EEEEeeccCC--CCcc-cC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHh
Q 043923 159 ----EIVPIQCTSL--NGFQ-IT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITE 222 (469)
Q Consensus 159 ----~~~~v~~~~~--~~~~-~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~ 222 (469)
.+..+|.+.. ..|+ -+ ++.+++.+-+......++.+|++..-....|.. .+.+.+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~ 253 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK 253 (441)
T ss_pred CCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1222332110 0011 01 122333221100012356665554334556764 568889999999999
Q ss_pred cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cc
Q 043923 223 KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SS 300 (469)
Q Consensus 223 ~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~ 300 (469)
||+++|.||++.++...+.. .....+ . ..+.++ ++||.+| .|+++|+++++++ +....... .+
T Consensus 254 ~g~lli~DEv~tG~gr~G~~-~a~~~~-g--------v~pDiv---t~~K~l~-~G~p~gav~~~~~-i~~~~~~~~~~T 318 (441)
T PRK05769 254 YGILLIDDEVQTGMGRTGKM-FAIEHF-G--------VEPDII---TLAKAIA-GGLPLGAVIGRAE-LMFLPPGSHANT 318 (441)
T ss_pred cCCEEEEechhhCCCcccce-ehhhcc-C--------CCCCEE---EEccccc-CCcccEEEEEehh-hhhcCCCCCCCC
Confidence 99999999999874322321 111111 1 112333 5899998 8999999998554 33322211 12
Q ss_pred cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHH
Q 043923 301 FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 301 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
+ ..+++++.++.+.|+.. ++ ...+.+++.-++|.+.|+++ ++......-|.++.+.+............
T Consensus 319 ~-~g~p~~~aaa~a~L~~l---~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~ 391 (441)
T PRK05769 319 F-GGNPVAAAAALATLEEL---EE---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLR 391 (441)
T ss_pred C-CcCHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHH
Confidence 2 24667777766666432 11 33444555555666666543 32212222356777776432111111122
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
..+...++ ++||.+.+. +...+|++... ++++++++++++|.+++++
T Consensus 392 ~~~~~~~~-~~Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 392 DKVLYEAF-KRGLLLLGA------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHH-hCCcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 33444544 679998753 23579999876 4999999999999999864
No 297
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=4.6e-13 Score=137.00 Aligned_cols=352 Identities=11% Similarity=0.063 Sum_probs=188.3
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccc-cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRE-LALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||+..+ ...+. .+.+.+++++..+. ... ...|.. .+....+|+.+.+... ..
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~----------~~~~~~~~~~----~~~~~~lae~L~~~~p----~~ 112 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVAL----------IQHSMIGYTH----SERAIRVAEKLAEISP----IE 112 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHh----------ccccccCccC----CHHHHHHHHHHHhhCC----CC
Confidence 34568888766 33443 46666666653111 000 011211 2333445555543321 22
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCC--Ccc-
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLN--GFQ- 172 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~- 172 (469)
.+.+++++++++|++.+++... .....|+.....|++....+....+. .++.+|.+... .|.
T Consensus 113 ~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 192 (457)
T PRK05639 113 NPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGI 192 (457)
T ss_pred cCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccc
Confidence 3689999999999999988753 23457888888887754332211111 12333332100 000
Q ss_pred ---cCHHH--------HHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 173 ---ITETA--------IEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 173 ---~d~~~--------l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
-+.+. +++.+........++.+|++.--....|. ..+.+-+++|.++|++||+++|.||++.++.-.+
T Consensus 193 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG 272 (457)
T PRK05639 193 NGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG 272 (457)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc
Confidence 02222 22222110011236777666533555676 4578899999999999999999999998732122
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcC
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSD 318 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~ 318 (469)
..+ . .+... ..+.++ +++|.+| .|+.+|+++++++ +.+.... ..++ ..++++..++.+.|+.
T Consensus 273 ~~~-a-~~~~g--------v~PDiv---~~gK~l~-gG~pi~av~~~~~-i~~~~~~~~~~T~-~g~p~~~aaa~a~l~~ 336 (457)
T PRK05639 273 KWF-A-SEWFE--------VKPDLI---IFGKGVA-SGMGLSGVIGRKE-LMDLTSGSALLTP-AANPVISAAAEATLEI 336 (457)
T ss_pred hHH-H-HHhcC--------CCCCEE---Eechhhc-CCCcceeEEehHH-HHhhcCCCcccCC-CcCHHHHHHHHHHHHH
Confidence 111 1 11111 223333 3899998 8999999999544 4442211 1122 2455555555555543
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCC
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
..- . ...+...+.-++|.+.|++ +++......-|.++.+.+..............++..++ ++||.+.+.
T Consensus 337 l~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~ 410 (457)
T PRK05639 337 IEE-E----NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSY 410 (457)
T ss_pred HHH-c----cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeec
Confidence 211 1 1122222333444444443 34322223345777777642211111122234455555 679999764
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.. ..+.+|+.... ++++++++++++|.+++++.
T Consensus 411 g~----~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 411 GM----FGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CC----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 21 24689999987 49999999999999999765
No 298
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.66 E-value=1.7e-14 Score=143.67 Aligned_cols=282 Identities=15% Similarity=0.174 Sum_probs=177.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCC-CCCcEEEeCC-hHHHHHHHHHHhcC---CCCEEEEccCCCcChHHHHhhhCCCEEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTF-DTSKIVLTAG-ATSANETLMFCLAE---PGEAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~-~~~~i~~t~G-~~~al~~~~~~l~~---~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~ 162 (469)
+.+.|+.++++++ . ++++|++|+| +|++++.++..+.. +||.|+. .|........++.. |+++..
T Consensus 46 ~~~~r~~l~~l~~--------~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~-g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELLN--------IPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRY-GGVVVI 115 (355)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhc-CCCcEE
Confidence 5677888888875 3 4678999988 99999999999987 5555543 22221122255666 998888
Q ss_pred eeccCCCCcccC-HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 163 IQCTSLNGFQIT-ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 163 v~~~~~~~~~~d-~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
++.+..+++. + ++..+..++ +++++|.+++-.|.||..++ ++++.||+++++|.+.+ ++..
T Consensus 116 ~~~~~~g~~~-~~~~~~~~~~~------~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs---~g~~ 177 (355)
T cd00611 116 VAAKEEGKYT-KIPDVETWDLA------PDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSN---ILSR 177 (355)
T ss_pred EecccccCCC-CCCCHhhcCCC------CCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEcccc---ccCC
Confidence 8876433331 2 222222222 38899999999999999743 23445999999999997 4443
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHH-------------HhcccccCcHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT-------------KMSSFGLVSSQT 308 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~-------------~~~~~~~~s~~~ 308 (469)
+ ..+.++ + +.+.|..|.+|.+| +|.++++++.+.+... ....+++++...
T Consensus 178 ~-idv~~~------------~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~ 240 (355)
T cd00611 178 P-IDVSKF------------G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFA 240 (355)
T ss_pred C-CCHHHh------------C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHH
Confidence 3 333222 2 35566899998665 7888886554432110 011134455555
Q ss_pred HHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhc-CCc-ee-c--CCceEEEEEecccccccCChhHHHHHHH
Q 043923 309 QYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKA-GIS-CL-K--SNAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~-~--~~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
..++.++|+- +.+ -++...++.++..+++.+.|+++ |+. .. . ...+..+.+.+++. ....++..
T Consensus 241 i~~L~aal~~---l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~------~l~~~~~~ 311 (355)
T cd00611 241 IYMMGLVLKW---LKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE------ELEKEFLK 311 (355)
T ss_pred HHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh------hhhHHHHH
Confidence 5555555432 122 25777888888999999999998 752 21 1 12334455666542 11112223
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
.+.+.|+.+.++.. ..+.+|+|+.. .+++|+++++++|+++.
T Consensus 312 -~~~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 312 -EAEAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred -HHHHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 34467998666543 23689999976 49999999999998853
No 299
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.66 E-value=3.6e-14 Score=141.79 Aligned_cols=285 Identities=19% Similarity=0.276 Sum_probs=177.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
-..+++++++++++ ..+++.+++++.||.+++.++ +++||+|+++.-+|......+... |++++.+++
T Consensus 26 ~~~~fE~~~a~~~g----------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~-G~~pv~~Di 94 (363)
T PF01041_consen 26 YVEEFEKEFAEYFG----------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWA-GAEPVFVDI 94 (363)
T ss_dssp HHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHT-T-EEEEE-B
T ss_pred HHHHHHHHHHHHhC----------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHh-ccEEEEEec
Confidence 35888999999985 678899999999999999998 478999999999999999888887 999999999
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCcc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFV 244 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~ 244 (469)
++ ..+.+|++.+++.+++ ++++|++.+. -|... ++.+|.++|+++|++||+|.+++... +.+.
T Consensus 95 ~~-~~~~id~~~~~~~i~~------~t~ai~~~h~---~G~~~---d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~--- 158 (363)
T PF01041_consen 95 DP-ETLNIDPEALEKAITP------KTKAILVVHL---FGNPA---DMDAIRAIARKHGIPLIEDAAQAFGARYKGR--- 158 (363)
T ss_dssp ET-TTSSB-HHHHHHHHHT------TEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETTE---
T ss_pred cC-CcCCcCHHHHHHHhcc------CccEEEEecC---CCCcc---cHHHHHHHHHHcCCcEEEccccccCceeCCE---
Confidence 85 5789999999999987 8899987744 45544 46778999999999999999998321 1111
Q ss_pred chhhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhcccc-------------------c
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-------------------L 303 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~-------------------~ 303 (469)
..- ..+ .+.+.|| +|.+. .| .-|+++++++.+.+.++.++..+ .
T Consensus 159 ~~G------------~~g-d~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~r 223 (363)
T PF01041_consen 159 PVG------------SFG-DIAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFR 223 (363)
T ss_dssp ETT------------SSS-SEEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B
T ss_pred ecc------------CCC-CceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccc
Confidence 111 112 3445566 69885 33 34999998888877776554322 1
Q ss_pred CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec--CCc---eE-EEEEecccccccCChhHH
Q 043923 304 VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK--SNA---GL-FCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~---g~-~~~v~~~~~~~~~~~~~~ 376 (469)
++.+....+..-|.. +++..+.-+++.+.+.+.|... ++...+ +.. .+ .+.+.+++... ...
T Consensus 224 m~~~~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~----~~r 292 (363)
T PF01041_consen 224 MSELQAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL----ADR 292 (363)
T ss_dssp -BHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----STH
T ss_pred cHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----chH
Confidence 233333333333333 3333344445556677778776 343322 221 11 12233332110 123
Q ss_pred HHHHHHHHHhCCeEEeCCCC--CC------CC----C----------CCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 377 MELWKKIVYDVKLNISPGSS--CH------CT----E----------PGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~--f~------~~----~----------~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
.++.+.|. +.||...+... .. .. . ...+-+-+.. +++++++..++.|+
T Consensus 293 d~l~~~L~-~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 293 DELVEALR-ARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHH-HTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 35666654 56999987541 10 00 0 1135555544 58899888888764
No 300
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=8.8e-14 Score=135.06 Aligned_cols=217 Identities=16% Similarity=0.162 Sum_probs=147.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---hC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---RT 156 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~~ 156 (469)
.+++.+ ....|...+++..+ ..+.++.+++..|+..++..|+.+|+.|+.....|.+....+.. ..
T Consensus 72 sr~~nP-t~~~le~~iaal~g----------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~ 140 (409)
T KOG0053|consen 72 SRSGNP-TRDVLESGIAALEG----------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKF 140 (409)
T ss_pred ccCCCC-chHHHHHHHHHHhC----------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHh
Confidence 344433 34778888887764 55688889999999999999999999999999999998766543 23
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|++...+..+ +++.+++++++ ++++|++.+|.||+..+.+.++ +.++|+++|+++|+|+.++..
T Consensus 141 gie~~~vd~~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~DI~~---l~~la~~~g~~vvVDnTf~~p 204 (409)
T KOG0053|consen 141 GGEGDFVDVD-------DLKKILKAIKE------NTKAVFLESPSNPLLKVPDIEK---LARLAHKYGFLVVVDNTFGSP 204 (409)
T ss_pred Cceeeeechh-------hHHHHHHhhcc------CceEEEEECCCCCccccccHHH---HHHHHhhCCCEEEEeCCcCcc
Confidence 7777777654 56778888775 7999999999999999988555 777777999999999998764
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhc-cc-ccCcHHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMS-SF-GLVSSQTQYLLS 313 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~-~~-~~~s~~~q~~~~ 313 (469)
++ .....+ +-.|++.|.+|.+| -..+=.|.++.+...+.+.+...+ .. +..++...+.+.
T Consensus 205 ~~-----~~pL~l------------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~ 267 (409)
T KOG0053|consen 205 YN-----QDPLPL------------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLS 267 (409)
T ss_pred cc-----cChhhc------------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHh
Confidence 22 222222 56789999999995 344556777775455544444333 22 334554444333
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+-+.. +.-+.++..++.-.+.+.|+..
T Consensus 268 Rglkt-------l~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 268 RGLKT-------LHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred cCcch-------hhhhHHHHHHHHHHHHHHhhhC
Confidence 33322 2223333344444455566554
No 301
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.65 E-value=2.9e-13 Score=136.91 Aligned_cols=313 Identities=12% Similarity=0.093 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHhHcCCCCCCC-C-CcEEE--eCChHHHHHHHHHHhc--------CCC-----CEEEEccCCCcChHHH
Q 043923 89 PAFKKALVEFMSEIRGNKVTFD-T-SKIVL--TAGATSANETLMFCLA--------EPG-----EAFLLPTPYYPGFDRD 151 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~-~-~~i~~--t~G~~~al~~~~~~l~--------~~g-----d~Vl~~~P~y~~~~~~ 151 (469)
.++.+.+.+++.+.++ ++ + +++.. |+|+||++..++.+.. ..| ..|++..-.|.++...
T Consensus 79 ~~le~~~~~~la~llg----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka 154 (431)
T TIGR01788 79 AEIENRCVNMLADLWH----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF 154 (431)
T ss_pred HHHHHHHHHHHHHHhC----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH
Confidence 4677777777766655 44 2 34544 8999999998886542 111 3688888889999988
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc------Ce
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK------NI 225 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~------~~ 225 (469)
++.. |+++..+|.++ +++.+|+++|+++|++ ++.+|+++..+|.||.+-|.++ |+++|+++ |+
T Consensus 155 ~~~l-g~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idpi~~---I~~i~~~~~~~~~~~~ 223 (431)
T TIGR01788 155 ARYF-DVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYEDVKA---LNDALDEYNAKTGWDI 223 (431)
T ss_pred HHHc-CceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCCHHH---HHHHHHHHHhhhCCCc
Confidence 8877 99999999875 4567999999999976 7888999999999999999655 78888899 99
Q ss_pred EEEEecccccccc--CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHHHHhccc-
Q 043923 226 HLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAATKMSSF- 301 (469)
Q Consensus 226 ~iI~Deay~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~~~~~~~- 301 (469)
++++|.+|+.+.. ...... ..+ . ......+..|.+|.+ +....+|+++..+.. +...+.....+
T Consensus 224 ~~HvDaaq~g~~~p~~~~~~~--~~~-~--------~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~~yl 291 (431)
T TIGR01788 224 PIHVDAASGGFIAPFVYPDLE--WDF-R--------LPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHVNYL 291 (431)
T ss_pred eEEEecccHHHHHHHhCCCch--hhc-C--------CCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheeccccc
Confidence 9999999986431 111111 011 0 123345566999976 244558998886543 22222110000
Q ss_pred -------c-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC-CceEEEEEecccccccC
Q 043923 302 -------G-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS-NAGLFCWVDMRHLLRSN 371 (469)
Q Consensus 302 -------~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~-~~g~~~~v~~~~~~~~~ 371 (469)
. ..+...-.++..++.-..+...-+++..++..+..+++.+.|++. ++++..+ .....+.+.++....
T Consensus 292 ~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~-- 369 (431)
T TIGR01788 292 GGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD-- 369 (431)
T ss_pred CCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC--
Confidence 0 011111112222222111112334666677777888899999888 4777654 333556666653111
Q ss_pred ChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 372 TFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
...+..++.+.| .+.|+.+..-.... ..+..++|+++.. ++++.++++++.|++++.++
T Consensus 370 ~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 370 PGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 001223455554 56798754222111 1233479999953 58899999999999988764
No 302
>PRK07678 aminotransferase; Validated
Probab=99.63 E-value=7e-13 Score=135.75 Aligned_cols=314 Identities=14% Similarity=0.102 Sum_probs=170.0
Q ss_pred HHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCC-----
Q 043923 92 KKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGV----- 158 (469)
Q Consensus 92 r~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~----- 158 (469)
...+|+.+.+..+ ..+.+++++++++|+..+++.... +| ..|+...-.|++....+....|.
T Consensus 91 ~~~lae~l~~~~~-----~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 91 AIKLAEKLNEWLG-----GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred HHHHHHHHHHhCC-----CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 3445555544322 235799999999999999887531 23 57888888887764333211121
Q ss_pred -------EEEEeeccCCCCccc---------C---HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHH
Q 043923 159 -------EIVPIQCTSLNGFQI---------T---ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVN 218 (469)
Q Consensus 159 -------~~~~v~~~~~~~~~~---------d---~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~ 218 (469)
.+..+|.+ +.+.. + ++.+++.++. ....++.+|++.-...-.|.+ .+.+-++++.+
T Consensus 166 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~ 241 (451)
T PRK07678 166 KYEPLAPGFLHVPPP--DCYRMPGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKE 241 (451)
T ss_pred ccCCCCCCCEEeCCC--ccccccccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHH
Confidence 11222221 11111 1 1223444431 112367766665334445654 57888999999
Q ss_pred HHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH
Q 043923 219 IITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 219 ~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~ 297 (469)
+|++||+++|.||++.++.-.+.. ... +... ..+.++ +++|.+| .| +.+|.+++.++ +.+.+..
T Consensus 242 lc~~~g~llI~DEV~tGfGRtG~~-~~~-~~~g--------v~PDiv---t~gK~lg-gG~~Pi~av~~~~~-i~~~~~~ 306 (451)
T PRK07678 242 ICQKHGALLISDEVICGFGRTGKA-FGF-MNYG--------VKPDII---TMAKGIT-SAYLPLSATAVKKE-IYEAFKG 306 (451)
T ss_pred HHHHcCCEEEEeehhhcCCcCchh-HHH-HhcC--------CCCCEE---Eeecccc-cCCcceeEEEEcHH-HHHHHhc
Confidence 999999999999999874222221 111 1111 223333 6799998 77 79999999544 4444432
Q ss_pred --------hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccc
Q 043923 298 --------MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR 369 (469)
Q Consensus 298 --------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~ 369 (469)
....+..++++..++.+.|+...- .+..++.++.-...++.|.+.+.++++......-|.++.+.+.....
T Consensus 307 ~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~ 385 (451)
T PRK07678 307 KGEYEHFRHVNTFGGNPAACALALKNLEIMEN-ENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKE 385 (451)
T ss_pred cCcccccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCc
Confidence 111122566666666666543211 11112222111222223333344444322222335666677642111
Q ss_pred cC---ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 370 SN---TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 370 ~~---~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.. .......++..++ ++||.+.+.....+...+.+|++... ++++++++++++|.+++++.
T Consensus 386 ~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 386 TKEPADNDKVASVVAACK-EKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred ccCcCchHHHHHHHHHHH-HCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 00 1112234455554 67999976321111223679999876 49999999999999999764
No 303
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.60 E-value=2e-13 Score=135.79 Aligned_cols=268 Identities=16% Similarity=0.142 Sum_probs=171.9
Q ss_pred cEE-EeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEeeccCCCCcccCHHHHHH-HHHHHHhc
Q 043923 113 KIV-LTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPIQCTSLNGFQITETAIEE-AYQLAQKR 188 (469)
Q Consensus 113 ~i~-~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~~ 188 (469)
.|+ ++++++.+++.++..++.+||++++..-...+. ...++.. |.. ..+..+...++ .+..++++ .+++
T Consensus 68 ~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~-g~~-~~~~~~~~~g~-~~~~~~~~~~l~~---- 140 (360)
T PRK05355 68 KVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKY-GEV-NVAASSEDDGF-TYIPPLDEWQLSD---- 140 (360)
T ss_pred EEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCc-eEEecccccCC-CCCCChhhccCCC----
Confidence 455 557789999999999999998888776654332 3445555 765 55544421222 23333333 4433
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEc
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
++++|.+++-.+.||...+ ++.++ +|+++|+|.+.+ ++..+ ..+..+ + +++.
T Consensus 141 --~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss---~g~~~-idv~~~------------d--~~~~ 192 (360)
T PRK05355 141 --DAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSD---ILSRP-IDVSKF------------G--LIYA 192 (360)
T ss_pred --CCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCcc---ccCcc-CCHHHc------------c--EEEE
Confidence 6889999999999999984 23334 799999999997 44443 332221 3 7788
Q ss_pred cCccccCCCcceEEEEEecCHHHHHHHH-------------HhcccccCcHHHHHHHHHHhcCchhhHH-HHHHHHHHHH
Q 043923 269 SLSKDLGLPGFRVGAIYSNDDMVVAAAT-------------KMSSFGLVSSQTQYLLSALLSDKKFTQN-YISENKKRLK 334 (469)
Q Consensus 269 S~SK~~g~~GlRiG~li~~~~~~~~~~~-------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~l~ 334 (469)
|..|.+|.+| +|.++++++.+.+... ....+++++....+++.++|+... .. -++...++.+
T Consensus 193 ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~--~~gG~e~i~~r~~ 268 (360)
T PRK05355 193 GAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLK--EQGGVAAMEKRNQ 268 (360)
T ss_pred eccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHH--HccCHHHHHHHHH
Confidence 9999998555 7888876554432111 011234456666666655554321 11 2677788888
Q ss_pred HHHHHHHHHHHhcCCc-e-ec--CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 335 QRHRKLVSGLEKAGIS-C-LK--SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~-v-~~--~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
+..+++++.|+++++. . .. ...+..+.+.+++. ....++...+ .++|+.+.+|.. ..+.+|+|+.
T Consensus 269 ~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~~~-~~~Gi~~~~~~~----~~g~vRiS~~ 337 (360)
T PRK05355 269 EKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE------ELDKKFLAEA-KAAGLVGLKGHR----SVGGMRASIY 337 (360)
T ss_pred HHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh------HHHHHHHHHH-HHCCCcccCCCC----ccCcEEEECC
Confidence 8999999999998752 2 11 12334566666653 1112333444 467999866653 2468999997
Q ss_pred c-CCHHHHHHHHHHHHHHHHh
Q 043923 411 N-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 411 ~-~~~e~i~~~l~~L~~~l~~ 430 (469)
. .+.+|++++++.|+++++.
T Consensus 338 ~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 338 NAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 6 4899999999999998765
No 304
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=1.6e-12 Score=133.25 Aligned_cols=333 Identities=14% Similarity=0.150 Sum_probs=184.3
Q ss_pred CCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+- +.+. .+.+.+++++.. .....|..+ .++...+|+.+.+... ..+
T Consensus 98 G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql-------------~~~~~~~~~---~~~~~~lAe~l~~~~p-----~~~ 156 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGHADDEVLAALAETM-------------KKGTSFGAP---CLLENVLAEMVIDAVP-----SVE 156 (474)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHH-------------hhCCCCCCC---CHHHHHHHHHHHHhCC-----CCC
Confidence 34578887653 3343 466776666532 111222211 3455666777765422 257
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhh--C-----------CC------EEEEeeccCCCCc
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWR--T-----------GV------EIVPIQCTSLNGF 171 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~--~-----------g~------~~~~v~~~~~~~~ 171 (469)
.+.++++++||...+++... ...++|+...-+|++....+... . |. .++.+|.
T Consensus 157 ~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 230 (474)
T PLN02482 157 MVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------ 230 (474)
T ss_pred EEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------
Confidence 99999999999999988753 23467888888888754321100 0 11 1111221
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
-|++.+++.++.. ..++.+||+.......|.+. +.+.+++|.++|++||+++|+||++.++ ..+.. ...+..
T Consensus 231 -nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~--ga~~~~ 303 (474)
T PLN02482 231 -NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG--GAQEYF 303 (474)
T ss_pred -CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc--hHhHHh
Confidence 1678888877641 22566555543355567665 4788999999999999999999999874 22221 111221
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----ccccCcHHHHHHHHHHhcCchhhHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----SFGLVSSQTQYLLSALLSDKKFTQNY 325 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~ 325 (469)
. ..+.+ .+++|.+| .|+.+|.+++ .+.+.+.+.... .....++++..++.+.|+...-
T Consensus 304 g--------v~PDi---~t~gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---- 366 (474)
T PLN02482 304 G--------ITPDL---TTLGKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---- 366 (474)
T ss_pred C--------CCCCE---EEecchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc----
Confidence 1 11222 37899998 8999999988 455555443211 1111355555555554432110
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hcCCcee-cCCceEEEEEeccc-cc------ccCChhHHHHHHHHHHHhCCeEEeC
Q 043923 326 ISENKKRLKQRHRKLVSGLE----KAGISCL-KSNAGLFCWVDMRH-LL------RSNTFEAEMELWKKIVYDVKLNISP 393 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~----~~g~~v~-~~~~g~~~~v~~~~-~~------~~~~~~~~~~l~~~ll~~~GI~v~p 393 (469)
....+++.+.-++|.+.|+ +.++++. ...+|++ .+.+.. .. ...+......++..++ ++||.+.|
T Consensus 367 -~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~ 443 (474)
T PLN02482 367 -PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAP 443 (474)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEec
Confidence 1122333333344444443 4455544 2334443 233321 10 0011112234555555 67999987
Q ss_pred CCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 394 GSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 394 g~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
... . .++ +++. +++++|+++++++.+++++
T Consensus 444 ~~~-~---~~~--psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 444 SQF-E---AGF--TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred cCC-C---CCc--CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 421 1 111 3444 5999999999999999865
No 305
>PRK07482 hypothetical protein; Provisional
Probab=99.60 E-value=2.4e-12 Score=132.08 Aligned_cols=351 Identities=11% Similarity=0.030 Sum_probs=191.4
Q ss_pred CCCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCC-CCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDY-HGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||+..+ .+.+ ..+.+.+++++.. .....+... ....+.+..+|+.+.+... -.
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~-------------~~~~~~~~~~~~~~~~~~~lAe~L~~~~p----~~ 110 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQA-------------KELAYYHTYVGHGTEASITLSKRIIDRAP----AG 110 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHH-------------HhcCccccccccCCHHHHHHHHHHHHhCC----CC
Confidence 34568888766 3333 3466666666531 111111110 1113555666666654321 13
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------C-C-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLA------E-P-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~------~-~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~ 170 (469)
.+.+++++++++|++.+++... . + ..+|+.....|++....+....|. .+..++.+....
T Consensus 111 ~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (461)
T PRK07482 111 MSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYR 190 (461)
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcccc
Confidence 4689999999999999998763 1 2 357888888888754322111111 111122110000
Q ss_pred ---cc--------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 171 ---FQ--------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 171 ---~~--------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+. .+++.+++.+... ...++.+|++.-...-.|.. .+.+-+++|.++|++||+++|.||+..++.-
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR 268 (461)
T PRK07482 191 RADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR 268 (461)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence 00 0245556555321 12356666555334455665 5788999999999999999999999988422
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHH---------hcccccCcHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATK---------MSSFGLVSSQT 308 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~---------~~~~~~~s~~~ 308 (469)
.+..+. .+... ..+.++ +++|.+| .|. .+|.+++.+ .+.+.+.. .......++++
T Consensus 269 tG~~~a--~~~~g--------v~PDiv---~~gKgl~-gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 333 (461)
T PRK07482 269 LGSMFG--SDHYG--------IEPDLI---TVAKGLT-SAYAPLSGSIVGE-KVWDVLEQGSDEHGAIGHGWTYSGHPIC 333 (461)
T ss_pred Ccchhh--HHhcC--------CCCCEE---EEccccc-cCccccceeeecH-HHHHHHhcccccCCccccCCCCCcCHHH
Confidence 232211 11111 223444 4789998 885 899999854 44444331 01111256677
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH----HhcCCceecCCceEEEEEecccccccCC-h----hHHHHH
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL----EKAGISCLKSNAGLFCWVDMRHLLRSNT-F----EAEMEL 379 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L----~~~g~~v~~~~~g~~~~v~~~~~~~~~~-~----~~~~~l 379 (469)
..++.+.|+..+- . ...+..++.-++|.+.| +++++......-|.++.+.+........ . .....+
T Consensus 334 ~Aaa~a~L~~~~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i 408 (461)
T PRK07482 334 AAAALANLDILER-E----NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQV 408 (461)
T ss_pred HHHHHHHHHHHHh-C----CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHH
Confidence 6666666543211 1 11222223333344444 3344322223345777787753211100 0 012244
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+..++ ++||.+.++. ..+.+|+..+. ++++++++++++|.+++++.
T Consensus 409 ~~~~~-~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 409 SAAAL-ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHHHH-HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55555 6799987532 13468998665 59999999999999999865
No 306
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.60 E-value=4.8e-15 Score=142.00 Aligned_cols=187 Identities=19% Similarity=0.264 Sum_probs=133.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGV 158 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~ 158 (469)
.|+......+|++.+++.++ .+..+++.++|.|..++++++++|++.|++..+.|.... .......|+
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g----------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~ 93 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG----------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGA 93 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTC
T ss_pred ccCCChhHHHHHHHHHHHcC----------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCc
Confidence 58877778888888888885 456678999999999999999999999999998764222 222223499
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
++++++.+.. ..+|++++++.++......+++++|++++|+|.. |.++|.+++++|.++|++||+.++.|.+..
T Consensus 94 ~~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl--- 168 (290)
T PF01212_consen 94 KLIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARL--- 168 (290)
T ss_dssp EEEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTH---
T ss_pred EEEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhH---
Confidence 9999997632 4689999999998754334579999999999863 899999999999999999999999999974
Q ss_pred cCCC--CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHH
Q 043923 238 FSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAA 295 (469)
Q Consensus 238 ~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~ 295 (469)
+... ...++.++.. .-.++.-|++|.+|+++ |.+++-++. +.+..
T Consensus 169 ~~a~~~~~~~~~e~~~----------~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~ 216 (290)
T PF01212_consen 169 ANAAAALGVSLAEIAA----------GADSVSFGGTKNGGAPG---GAVLAGNKEFIAKAR 216 (290)
T ss_dssp HHHHCHHHHHHHHHHT----------TSSEEEEETTSTT-SSS---EEEEEESHHHHHHHH
T ss_pred HHhhhcccccHHHHhh----------hCCEEEEEEEccccccc---ceEEEechHHHHHHH
Confidence 2211 1123444432 33455569999998776 665544444 44443
No 307
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.59 E-value=4.3e-13 Score=126.76 Aligned_cols=296 Identities=17% Similarity=0.225 Sum_probs=192.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH----HHHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~ 162 (469)
....|++.||..-+- -.-+.+++++.|+..++..+.++||.|+...--|.+.. ..++.. |+++..
T Consensus 63 T~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~-Gi~v~f 131 (426)
T COG2873 63 TTDVLEERIAALEGG----------VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRL-GIEVRF 131 (426)
T ss_pred hHHHHHHHHHHhhcc----------hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhc-CcEEEE
Confidence 358899999988751 12366788899999999999999999999888787754 345556 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+.-+ |++.++++|++ ++|+|++..-.||.+.+.+ +++++++|+++|+.+|+|..+...++-.
T Consensus 132 vd~~-------d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~r-- 193 (426)
T COG2873 132 VDPD-------DPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCR-- 193 (426)
T ss_pred eCCC-------CHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecc--
Confidence 8743 68999999987 9999999999999999988 5569999999999999999987532211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH----HHHHhcc----cc--------cCcH
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA----AATKMSS----FG--------LVSS 306 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~----~~~~~~~----~~--------~~s~ 306 (469)
. + ..+-.|+++|+||..|-.|--+|-++.+.....- .+..+.. +. ....
T Consensus 194 ---P--~----------~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~a 258 (426)
T COG2873 194 ---P--I----------EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAA 258 (426)
T ss_pred ---h--h----------hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHH
Confidence 1 1 3366789999999998899889888764321110 0000000 00 0001
Q ss_pred HHHHHHHHHhcCch--------h----hHHHHHHHHHHHHHHHHHHHHHHHhc-CCc------------------eecCC
Q 043923 307 QTQYLLSALLSDKK--------F----TQNYISENKKRLKQRHRKLVSGLEKA-GIS------------------CLKSN 355 (469)
Q Consensus 307 ~~q~~~~~~l~~~~--------~----~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~------------------v~~~~ 355 (469)
....+-...|+|.. | ..+-+.-+.++..++...+.+.|+.+ .+. +.+..
T Consensus 259 f~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g 338 (426)
T COG2873 259 FIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKG 338 (426)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCC
Confidence 11111111222210 0 01224456677788888899999876 222 22233
Q ss_pred ceEEEEEecccccc-cCChhHHHHHHHHHHHhC----CeEEeCCCCCCC-----------CCCCeEEEEeecCCHHHHHH
Q 043923 356 AGLFCWVDMRHLLR-SNTFEAEMELWKKIVYDV----KLNISPGSSCHC-----------TEPGWFRVCFANMSEDTLKL 419 (469)
Q Consensus 356 ~g~~~~v~~~~~~~-~~~~~~~~~l~~~ll~~~----GI~v~pg~~f~~-----------~~~~~iRi~~~~~~~e~i~~ 419 (469)
.|-.+.+.+++... ...+.+..+++..+. .- -+.+.|.+..+. -.++.||+|++- |+++.
T Consensus 339 ~g~vltF~~kgg~ea~~~fi~~l~L~s~la-NvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~D 414 (426)
T COG2873 339 AGAVLTFGVKGGYEAGKKFIDALKLFSHLA-NIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDIDD 414 (426)
T ss_pred CceEEEEEecChHHHHHHHHHHHHHHHhhc-cccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHHH
Confidence 34567777776532 223334445554443 22 245556654432 126789999984 66777
Q ss_pred HHHHHHHHHHh
Q 043923 420 SMQRLKAFVDS 430 (469)
Q Consensus 420 ~l~~L~~~l~~ 430 (469)
+++-|+++++.
T Consensus 415 iiaDl~qAl~~ 425 (426)
T COG2873 415 IIADLEQALEA 425 (426)
T ss_pred HHHHHHHHHhc
Confidence 88888887763
No 308
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.59 E-value=1.3e-14 Score=143.82 Aligned_cols=180 Identities=21% Similarity=0.233 Sum_probs=121.9
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
-+.+..+.+|+.|+ .....+++||+|.++.+++.+++++||.|+++..+|.+...++... |+++++++..
T Consensus 67 ~I~eAe~~aA~~fG---------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~-ga~Pvyi~p~ 136 (417)
T PF01276_consen 67 IIKEAEELAARAFG---------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILS-GAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHHHHHT---------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHH-TEEEEEEEEE
T ss_pred HHHHHHHHHHHhcC---------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCeEEEecCC
Confidence 35677777788776 3566889999999999999999999999999999999999988888 9999988764
Q ss_pred CCCCcc----cCH-----HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 167 SLNGFQ----ITE-----TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 167 ~~~~~~----~d~-----~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
...+. +++ +.++++|++.+.. ..++++++++|+. .|.+++ +++|+++|+++++.|++||||+...
T Consensus 137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~ 210 (417)
T PF01276_consen 137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHF 210 (417)
T ss_dssp -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTG
T ss_pred -ccccCCccCCChhhhhHHHHHHHHHhCccc-cCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccc
Confidence 33332 455 8888888763211 0145599999986 899988 5558999999999999999997642
Q ss_pred -cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH
Q 043923 238 -FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD 289 (469)
Q Consensus 238 -~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~ 289 (469)
|. +-..+...+..+ ......++++.|.+|+++ +=-..++|.....
T Consensus 211 ~F~-~lp~~a~~~gad-----~~~~~~~~vvqS~HKtL~-altQts~lh~~~~ 256 (417)
T PF01276_consen 211 GFH-PLPRSALALGAD-----RPNDPGIIVVQSTHKTLP-ALTQTSMLHVKGD 256 (417)
T ss_dssp GCS-GGGTTCSSTTSS------CTSBEEEEEEEHHHHSS-S-TT-EEEEEETC
T ss_pred cCC-CCccchhhccCc-----cccccceeeeechhhccc-ccccceEEEecCC
Confidence 23 111121112110 012346789999999984 2234456655443
No 309
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.59 E-value=1.8e-12 Score=133.97 Aligned_cols=350 Identities=11% Similarity=0.092 Sum_probs=187.5
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCC-CCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDY-HGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||+..+ .+.+. .+.+.+++++..+ ....+... .+..+....+|+.+.+.+. +.+
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~-------------~~~~~~~~~~~~~~~~~~lae~L~~~~~---~~~ 150 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLN-------------KLPFYHSFWNRTTKPSLDLAKELLEMFT---ARK 150 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHh-------------hccceecccccCcHHHHHHHHHHHhhcC---CCC
Confidence 34568998775 34443 4556666655311 11111111 1223445555655543321 112
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCC-CEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLA-------EPG-EAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~-------~~g-d~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~ 170 (469)
.+.+++++++++|+..+++... .++ +.|+..+-.|++.........|.. +..++.+ ..
T Consensus 151 ~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~ 228 (504)
T PLN02760 151 MGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HY 228 (504)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cc
Confidence 3579999999999999998763 122 578888888777643222111321 1122211 00
Q ss_pred cc-------------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 171 FQ-------------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 171 ~~-------------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|. ...+++++.+... ...++.+|++..-..-.|.+ .|.+-+++|.++|++||+++|.||++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf 306 (504)
T PLN02760 229 WRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF 306 (504)
T ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC
Confidence 11 0113455554321 11245555544334455764 57888999999999999999999999764
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--------cc-cccCcH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--------SS-FGLVSS 306 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--------~~-~~~~s~ 306 (469)
.-.+..+ . .+... ..+. +.+++|.+| .| +.+|.++++ +.+.+.+... .. .+..++
T Consensus 307 GRtG~~~-a-~e~~g--------v~PD---ivtlgK~lg-gG~~PigAv~~~-~~i~d~~~~~~~~~~~~~h~~T~~gnP 371 (504)
T PLN02760 307 GRLGTMF-G-CDKYN--------IKPD---LVSLAKALS-SAYMPIGAVLVS-PEISDVIHSQSNKLGSFAHGFTYSGHP 371 (504)
T ss_pred cccchhh-H-HHhcC--------CCCc---EEEeccccc-CCccccceEeec-HHHHhhhhcccccccCcccCCCCCCCH
Confidence 2222211 1 11111 1122 347899998 67 589999885 4555544321 11 122466
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh---cCCceecCCceEEEEEecccccccCC-h----hHHHH
Q 043923 307 QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK---AGISCLKSNAGLFCWVDMRHLLRSNT-F----EAEME 378 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~g~~v~~~~~g~~~~v~~~~~~~~~~-~----~~~~~ 378 (469)
++..++.+.|+...- +...++.++.-++|.+.|++ .++......-|.++.+.+........ . .....
T Consensus 372 l~~Aaala~Le~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~ 446 (504)
T PLN02760 372 VSCAVALEALKIYKE-----RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAY 446 (504)
T ss_pred HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHH
Confidence 666666665542211 11223333333444444433 33322122235777777743211110 0 11223
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++..++ ++||.+.+.. ..+|++... ++++++++++++|.+++++..+
T Consensus 447 i~~~~~-~~Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 447 FGAECK-KRGMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred HHHHHH-hCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 444444 6799997631 358999765 4999999999999999877654
No 310
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.59 E-value=3.7e-12 Score=130.34 Aligned_cols=346 Identities=16% Similarity=0.111 Sum_probs=190.0
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ ...+. .+.+.+++++..+. ......+. -..+....+|+.+.+..+ ...
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~----------~~~~~~~~---~~~~~~~~lAe~L~~~~p----~~~ 114 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDT----------LEHAMLAG---CTHEPAIELAERLAALTG----GTL 114 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHh----------cCCccccc---cCCHHHHHHHHHHHHhCC----CCC
Confidence 34568898766 44443 46666666653111 00001100 112344556666654322 123
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------CC-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCC-
Q 043923 112 SKIVLTAGATSANETLMFCLA-------EP-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNG- 170 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~-------~~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~- 170 (469)
+.+++++++++|+..+++... .+ ..+|+...-+|++....+....|. .+..+|.....+
T Consensus 115 ~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (453)
T PRK06943 115 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGA 194 (453)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccc
Confidence 589999999999999988752 12 357888888887754222211121 112222211000
Q ss_pred -cc--------cCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 171 -FQ--------ITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 171 -~~--------~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
+. -+++.+++.+.. ...++.+|++.- ...-.|. ..+.+-+++|.++|++||+++|.||+..++.-.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRt 271 (453)
T PRK06943 195 RPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRT 271 (453)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCC
Confidence 00 123555555542 223677766663 2555666 568899999999999999999999999874222
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH--------hcccccCcHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--------MSSFGLVSSQTQY 310 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~--------~~~~~~~s~~~q~ 310 (469)
+.- .. .+.. +..+.++ +++|.+| .| +.+|.+++.+ .+.+.+.. ....+..++++..
T Consensus 272 G~~-fa-~~~~--------gv~PDiv---t~gKgl~-gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~~~T~~gnpl~~a 336 (453)
T PRK06943 272 GTF-FA-CEQA--------GVWPDFL---CLSKGIS-GGYLPLSLVLSRD-AIFAAFYDDDVTRGFLHSHSYTGNPLACR 336 (453)
T ss_pred cch-hH-HHhC--------CCCCCeE---eeehhhc-cCcccceEEEEcH-HHHHhhcccCccCCccCCCCCCCCHHHHH
Confidence 221 11 1111 1224444 5689998 89 5999999954 44444421 1111224666666
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHh
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYD 386 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~ 386 (469)
++.+.|+-.+- . ...++.++.-++|.+.|+++ ++.-.. .-|+++.+.+...... .......+...++ +
T Consensus 337 aa~a~L~~i~~-~----~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~-~~~~~~~i~~~~~-~ 408 (453)
T PRK06943 337 AALATLDLFAE-D----DVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIFAFDVALDGDA-ARTFSRRFFEAAL-E 408 (453)
T ss_pred HHHHHHHHHHh-c----CHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEEEccCCCc-chHHHHHHHHHHH-H
Confidence 66665543211 1 11222333334444444433 222122 3357777777521111 1111234455554 6
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+||++.+.. +.+|++... ++++++++++++|.+++++.
T Consensus 409 ~Gll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 409 RELLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CCcEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 799997631 358998655 59999999999999999875
No 311
>PRK06917 hypothetical protein; Provisional
Probab=99.59 E-value=5.1e-12 Score=129.20 Aligned_cols=360 Identities=15% Similarity=0.117 Sum_probs=192.7
Q ss_pred CCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
......+||+..+ ...+. .+.+.+++++.... . ...+..... .+....+|+.+.+... -
T Consensus 27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~----------~--~~~~~~~~~-~~~~~~lae~L~~~~p----~ 89 (447)
T PRK06917 27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEE----------V--SFVYRSQFT-SEPAEKLAKKLSDLSP----G 89 (447)
T ss_pred eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhh----------C--cCccccccC-CHHHHHHHHHHHHhCC----C
Confidence 3344568898765 33343 46666666653211 0 001110011 2445556666654321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc-------CC-CCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCC
Q 043923 110 DTSKIVLTAGATSANETLMFCLA-------EP-GEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLN 169 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~-------~~-gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 169 (469)
..+.+++++++++|+..+++... .+ ..+|+...-.|++....+....+.. +..+|.....
T Consensus 90 ~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (447)
T PRK06917 90 DLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCY 169 (447)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccc
Confidence 23579999999999999998762 12 3678888888877654332211211 1112211000
Q ss_pred C--ccc--------CHHHHHHHHHHHHhcCCceeEEEEecCCC-CCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 170 G--FQI--------TETAIEEAYQLAQKRHLKVKGVLVTNPSN-PLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 170 ~--~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~P~N-PtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
. +.- +++.++..++.. ...++.+|++.-... -.|. ..+.+-+++|.++|++||+++|.||++.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfG 247 (447)
T PRK06917 170 RCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLG 247 (447)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcC
Confidence 0 000 134555555421 112566666653233 3444 5678999999999999999999999998732
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHh-----c-ccccCcHHHHH
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKM-----S-SFGLVSSQTQY 310 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~-----~-~~~~~s~~~q~ 310 (469)
-.+..+ . .+... ..+.++ +++|.+| .|+ .+|.+++.+ .+.+.+... . .....++++..
T Consensus 248 RtG~~~-a-~~~~g--------v~PDi~---~~gK~l~-~G~~Pi~a~~~~~-~i~~~~~~~~~~~~~~~T~~gnpl~~a 312 (447)
T PRK06917 248 RTGAMF-A-MEHWG--------VEPDIM---TLGKGLG-AGYTPIAATVVSD-RVMEPILRGSRSIMSGHTLSANPLSAA 312 (447)
T ss_pred cccchh-h-HHhcC--------CCCCEE---Eeeehhc-cCCcceEEEEEcH-HHHHHHhccCcccccccCCCCCHHHHH
Confidence 122211 1 11111 223333 6799998 885 999999954 444444321 1 11224666666
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEeccccccc-CC----hhHHHHHHH
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRS-NT----FEAEMELWK 381 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~-~~----~~~~~~l~~ 381 (469)
++.+.|+...- +...+.+++.-++|.+.|++ +++......-|+++.+.+...... .. ......++.
T Consensus 313 aa~a~l~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 387 (447)
T PRK06917 313 TALAVLEYMEK-----HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELIS 387 (447)
T ss_pred HHHHHHHHHHH-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHH
Confidence 66666543210 11223333333444444443 333222223357777776321110 00 011234445
Q ss_pred HHHHhCCeEEeCCCC-CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 382 KIVYDVKLNISPGSS-CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~-f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++ ++||++.|+.. ......+.+|++... ++++++++++++|.+++++..+
T Consensus 388 ~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 388 VAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred HHH-hCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 554 67999987521 111124579998875 4999999999999999987644
No 312
>PRK15029 arginine decarboxylase; Provisional
Probab=99.59 E-value=5.7e-13 Score=141.40 Aligned_cols=178 Identities=14% Similarity=0.135 Sum_probs=125.7
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
-+.+..+..|+.|+ .....+++||+|.++.+++.+++++||+|+++..+|.+...++... |++++.++-.
T Consensus 206 ~I~eAq~~aA~~fg---------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~-ga~Pvyl~P~ 275 (755)
T PRK15029 206 AFGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILT-GAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHHHHhC---------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEeccc
Confidence 35666667777775 3567889999999999999999999999999999999999988887 9999988643
Q ss_pred CCCCcc----cC-----HHHHHHHHHHHHh----cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 167 SLNGFQ----IT-----ETAIEEAYQLAQK----RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 167 ~~~~~~----~d-----~~~l~~~i~~~~~----~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
. +.|. ++ ++.++++|++.+. .+.+++++++++|+. .|.+++. ++|+++|+++++.|++||||
T Consensus 276 ~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di---~~I~~~~h~~~~~llvDEAh 350 (755)
T PRK15029 276 R-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNA---KEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_pred c-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCH---HHHHHHHHhcCCeEEEECcc
Confidence 2 2222 23 7889998865321 223556999999876 8999884 55899999999999999999
Q ss_pred cccc-cCCCCccchhhhhhccccccCCcCCe-EEEEccCccccCCCcceEEE-EEe
Q 043923 234 SGTV-FSSPGFVSIMEILKDRNCENTQVWNR-VHIVYSLSKDLGLPGFRVGA-IYS 286 (469)
Q Consensus 234 ~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~-~i~i~S~SK~~g~~GlRiG~-li~ 286 (469)
+... |.. .++....+..+. ....+- ++++.|.+|++ |++.-|. +..
T Consensus 351 Gah~~F~~-~~p~~sa~~~~~----~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 351 YGYARFNP-IYADHYAMRGEP----GDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred ccccccCc-cccccccccccc----cccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 7642 322 121111110000 000123 48899999998 5555554 444
No 313
>PRK06062 hypothetical protein; Provisional
Probab=99.59 E-value=2.5e-12 Score=131.62 Aligned_cols=352 Identities=14% Similarity=0.114 Sum_probs=189.4
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ .+.+. .|.+.+++++... ....+.... ..+.+..+|+.+.+... -.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~~~-~~~~~~~lae~L~~~~p----~~ 111 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAA-------------RLCTVAPAH-ANDARSEAARLIAERAP----GD 111 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHH-------------hcCCcCCcc-CCHHHHHHHHHHHHhCC----CC
Confidence 344568888765 34343 4566666655311 111111111 13445556666654321 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCE-----------EEEeeccC--CCCcc--c
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVE-----------IVPIQCTS--LNGFQ--I 173 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~-----------~~~v~~~~--~~~~~--~ 173 (469)
.+.+++++++++|...+++... ....+|+...-.|++....+....+.. +..++.+. ...|. -
T Consensus 112 ~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 191 (451)
T PRK06062 112 LSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATT 191 (451)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCC
Confidence 4689999999999999988753 234578888888877653332211211 12222111 00010 1
Q ss_pred C-------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 174 T-------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 174 d-------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
| ++.+++.++.. ...++.+|++..-..-.|.+ .+.+-+++|.++|++||+++|+||++.+ |+.....-
T Consensus 192 ~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG--fGRtG~~~ 267 (451)
T PRK06062 192 EEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG--FGRTGKWF 267 (451)
T ss_pred hHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC--CCcCcHHH
Confidence 2 45566665421 11356665555334455665 5788899999999999999999999987 43211010
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHh---cc-cccCcHHHHHHHHHHhcCch
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKM---SS-FGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~---~~-~~~~s~~~q~~~~~~l~~~~ 320 (469)
..+... ..+.+ .+++|.+| .|+ .+|.+++.+ .+.+.+... .. .+..++++..++.+.|+..+
T Consensus 268 a~~~~g--------v~PDi---~t~gK~lg-gG~~Pigav~~~~-~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~ 334 (451)
T PRK06062 268 AIEHFG--------VVPDL---ITFAKGVN-SGYVPLGGVAISE-AIAATFADRPYPGGLTYSGHPLACAAAVATINAME 334 (451)
T ss_pred HHHhcC--------CCCCe---eeechhhh-cCCcCcEEEEEcH-HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 111111 12232 37899998 884 999999955 455544321 11 12245666666666554321
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHh----cCCceecCCceEEEEEecccccccCC--------hhHHHHHHHHHHHhC
Q 043923 321 FTQNYISENKKRLKQRH-RKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRSNT--------FEAEMELWKKIVYDV 387 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~-~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~~~--------~~~~~~l~~~ll~~~ 387 (469)
- . ...+..++.- +++.+.|++ .++......-|+++.+.+........ ......++..++ ++
T Consensus 335 ~-~----~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 408 (451)
T PRK06062 335 E-E----GIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ER 408 (451)
T ss_pred h-c----CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HC
Confidence 1 0 1122222221 233333333 33211122235677677642110000 011234455544 67
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 388 KLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 388 GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
||.+.+. .+.+|++... +++++++++++++.+++++.+..
T Consensus 409 Gvl~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~~ 449 (451)
T PRK06062 409 GLLPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVADAA 449 (451)
T ss_pred CcEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 9998642 2469998865 59999999999999999876653
No 314
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=6.2e-12 Score=128.19 Aligned_cols=342 Identities=14% Similarity=0.096 Sum_probs=184.2
Q ss_pred CCCCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+- ..+. .|.+.+++++..+ ....+. . . .+....+|+.+.+... .
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~-~-~-~~~~~~la~~l~~~~p-----~ 108 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE-------------NGVLYG-T-P-TELEIEFAKMLKEAIP-----S 108 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCccC-C-C-CHHHHHHHHHHHHhCC-----C
Confidence 3345688987653 3343 4666666665311 111111 1 1 2334555655543321 2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEE--------eeccC-CCCc---ccCHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVP--------IQCTS-LNGF---QITET 176 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~--------v~~~~-~~~~---~~d~~ 176 (469)
.+.+++++++++|+..+++... .....|+...-.|++....+....|..... ++... .+-+ ..|++
T Consensus 109 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 188 (428)
T PRK12389 109 LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIE 188 (428)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHH
Confidence 4689999999999999988753 234678888888877654332211211100 00000 0000 01678
Q ss_pred HHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
.+++.+++. +.++.+|++..-....|.+ .+.+.+++|.++|++||+++|.||++.++ .. ......+...
T Consensus 189 ~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~--Rt-~~~~a~~~~g---- 258 (428)
T PRK12389 189 ALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF--RF-MYGGAQDLLG---- 258 (428)
T ss_pred HHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc--cc-CcchhhHHhC----
Confidence 888877632 2256665655335556765 46888999999999999999999999874 21 1111111111
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----cccccCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----SSFGLVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
..+.+ -+++|.+| .|+.+|.++++ +.+.+.+... ...+..++++..++.+.|+...- . ...
T Consensus 259 ----v~PDi---vt~gK~lg-gG~Pi~av~~~-~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~----~l~ 324 (428)
T PRK12389 259 ----VEPDL---TALGKIIG-GGLPIGAYGGR-KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-E----GVY 324 (428)
T ss_pred ----CCCCe---eeechhhc-CCCceeEEeEH-HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-c----cHH
Confidence 12233 27899998 89999999884 4455544311 11122566666666555542211 1 122
Q ss_pred HHHHHHHHHHHHHHH----hcCCceec-CCceEEEEEeccccccc-------CChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 331 KRLKQRHRKLVSGLE----KAGISCLK-SNAGLFCWVDMRHLLRS-------NTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~----~~g~~v~~-~~~g~~~~v~~~~~~~~-------~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
+++++.-++|.+.|+ ++++.+.. ...|++ .+.+...... ........+...+ .++||.+.+..
T Consensus 325 ~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~--- 399 (428)
T PRK12389 325 EKLDRLGAMLEEGILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLM-LNQGINLAPSK--- 399 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHH-HHCCcEeecCC---
Confidence 223333344444443 34533222 223333 3444221100 0111122344444 46799998752
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 399 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 399 ~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
.+.+.+++. +++++++++++++.+++++
T Consensus 400 ---~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 ---YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ---CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 112445554 5999999999999999864
No 315
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.58 E-value=2e-12 Score=133.65 Aligned_cols=316 Identities=12% Similarity=0.151 Sum_probs=189.5
Q ss_pred CCCCcHHHHHHHHHHHHhHcCC-C-------CCC-CCCcEEEeCChHHHHHHHHHHhcC---------------------
Q 043923 84 DYHGLPAFKKALVEFMSEIRGN-K-------VTF-DTSKIVLTAGATSANETLMFCLAE--------------------- 133 (469)
Q Consensus 84 ~~~g~~~Lr~aia~~l~~~~~~-~-------~~~-~~~~i~~t~G~~~al~~~~~~l~~--------------------- 133 (469)
..+...++++.+.+++.+..+. . ... +...-++|+|+|+|+..++.+..+
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 3445579999999998876420 0 000 112357799999998887766321
Q ss_pred -----CCCEEEEccCCCcChHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCC
Q 043923 134 -----PGEAFLLPTPYYPGFDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG 205 (469)
Q Consensus 134 -----~gd~Vl~~~P~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG 205 (469)
++..|++..-.|.+...++... |+ +++.+|++. ++.+|+++|+++|++....+.++-+|+-+..++.||
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~kaa~~l-glg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLGKAADVL-GIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETG 279 (522)
T ss_pred hhccCCceEEEECCCchHHHHHHHHHc-CCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCC
Confidence 1346888888888888888777 87 788999874 568999999999976544433344444445577899
Q ss_pred CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEE
Q 043923 206 TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIY 285 (469)
Q Consensus 206 ~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li 285 (469)
.+-|.+ +|+++|+++|+++++|.+|+....-.. ....++.. ......+..|.+|.++ ....+|.++
T Consensus 280 aiDpl~---eIa~i~~~~g~~lHVDaA~gg~~~~~~---~~r~~l~g-------le~aDSit~d~HK~l~-~P~g~G~ll 345 (522)
T TIGR03799 280 NIDPLD---EMADIAQELGCHFHVDAAWGGATLLSN---TYRHLLKG-------IERADSVTIDAHKQLY-VPMGAGMVL 345 (522)
T ss_pred CcCCHH---HHHHHHHHcCCeEEEEchhhhHHHhCH---HHHHHhcC-------chhCCEEEEChhhcCC-cCcccEEEE
Confidence 998855 588899999999999999985432111 11122221 1234556679999775 557799998
Q ss_pred ecCHHHHHHHHHhccc---------------ccCc--HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 043923 286 SNDDMVVAAATKMSSF---------------GLVS--SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA- 347 (469)
Q Consensus 286 ~~~~~~~~~~~~~~~~---------------~~~s--~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 347 (469)
..++...+.+.....+ ++-+ .+..+++...+.. .-++...++..+..+++.+.|++.
T Consensus 346 vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~-----~G~~~ii~~~~~la~~l~~~L~~~~ 420 (522)
T TIGR03799 346 FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR-----KGYELLIDQSIEKAKYFADLIQQQP 420 (522)
T ss_pred EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8665543333221000 1001 1123333333332 234666677777888899999877
Q ss_pred CCceecCCceEEEEEec-ccccccC----------C----hhHH-HHHHHHHHHhCCeEEeCCCC-----CCCCCCCeEE
Q 043923 348 GISCLKSNAGLFCWVDM-RHLLRSN----------T----FEAE-MELWKKIVYDVKLNISPGSS-----CHCTEPGWFR 406 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~-~~~~~~~----------~----~~~~-~~l~~~ll~~~GI~v~pg~~-----f~~~~~~~iR 406 (469)
++++..+..-..+.+++ |...... . ...- ..+.+++ .+.|........ +...+...+|
T Consensus 421 ~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~-~~~G~~~vs~t~l~~~~~~g~~~~~lR 499 (522)
T TIGR03799 421 DFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQ-REAGKSFVSRTRLTPAQYDHQPTVVFR 499 (522)
T ss_pred CeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEecccccCCCCcEEEE
Confidence 78876654334555554 2211100 0 0001 2233333 344665443221 2111234799
Q ss_pred EEeecC--CHHHHHHHHH
Q 043923 407 VCFANM--SEDTLKLSMQ 422 (469)
Q Consensus 407 i~~~~~--~~e~i~~~l~ 422 (469)
+++... ++++++.+++
T Consensus 500 ~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 500 VVLANPLTTHEILQDILD 517 (522)
T ss_pred EEecCCCCCHHHHHHHHH
Confidence 999773 7788777664
No 316
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=6.1e-12 Score=128.97 Aligned_cols=309 Identities=14% Similarity=0.104 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCE--------
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVE-------- 159 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~-------- 159 (469)
+....+|+.+.+..+ -..+.+++++++++|+..++.... .....|+.....|++....+....|..
T Consensus 113 ~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 113 ETAIECAEKLTEIAG----GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 444555555554322 124689999999999999987753 233678888887776543222111211
Q ss_pred ----EEEeeccC--CCCcc-cC------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q 043923 160 ----IVPIQCTS--LNGFQ-IT------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIH 226 (469)
Q Consensus 160 ----~~~v~~~~--~~~~~-~d------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~ 226 (469)
+..+|... ...|. .| ++.+++.++. ..++.+|++.-..+..+...+.+-+++|.++|++||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 189 LMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 12222110 00011 01 2345555532 22566655543344445577888999999999999999
Q ss_pred EEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH---hcccc
Q 043923 227 LISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK---MSSFG 302 (469)
Q Consensus 227 iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~---~~~~~ 302 (469)
+|.||++.++.-.+..+ . .+... ..+.++ +++|.+| .| +.+|.+++.+. +...... ..++
T Consensus 265 lI~DEV~tG~GRtG~~f-a-~e~~g--------v~PDiv---~~gKgl~-gG~~P~~av~~~~~-i~~~~~~~~~~~T~- 328 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWF-T-HQAYG--------IEPDIL---CIGKGLG-GGLVPIAAMITKDK-YNTAAQISLGHYTH- 328 (459)
T ss_pred EEEechhhCCCccchhh-H-hHhhC--------CCCCEE---Eeccccc-CCCCcceEEEEcHH-HHhhccCCCCCCCC-
Confidence 99999998732222211 1 11111 223333 4899998 77 59999998544 4333221 1122
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEecccccccC--ChhHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRSN--TFEAE 376 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~~--~~~~~ 376 (469)
..++++..++.+.|+...- +...++.++.-++|.+.|++ +++......-|.++.+.+....... .....
T Consensus 329 ~gnpl~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~ 403 (459)
T PRK06082 329 EKSPLGCAAALATIEVIEQ-----EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEA 403 (459)
T ss_pred CcCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHH
Confidence 2566666666555542210 11233333344444444443 3332222233577777775321111 11112
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
..++..++ ++||.+.+. ..+.+|++... +++++++++++++.+++.+..+.
T Consensus 404 ~~~~~~~~-~~Gvl~~~~------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 404 EAVLYRCL-NNGLSFKVS------QGNVIQLSPPLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHHHH-hCCCEEEec------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 34445554 679999763 13579999765 59999999999999999887663
No 317
>PRK06105 aminotransferase; Provisional
Probab=99.58 E-value=2.7e-12 Score=131.66 Aligned_cols=354 Identities=13% Similarity=0.088 Sum_probs=189.4
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ ...+. ++.+.+++.+.... ......+. ....+.+.++|+.+.+... ..
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------~~~~~~~~--~~~~~~~~~lae~L~~~~p----~~ 108 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKK----------LPFYHTFS--HKSHGPVIDLAEKLVAMAP----VP 108 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHh----------CCCeeccc--ccCCHHHHHHHHHHHHhCC----CC
Confidence 334568998765 34443 46666666653111 00001111 0112334445555544321 23
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------C-C-CCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLA------E-P-GEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~------~-~-gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~ 170 (469)
.+.+++++++++|+..+++... . + ...|+...-.|++....+....+.. +..+|......
T Consensus 109 ~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~ 188 (460)
T PRK06105 109 MSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYR 188 (460)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccc
Confidence 4689999999999999998742 1 2 3578887877776543321111211 11222110000
Q ss_pred cc-----------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 171 FQ-----------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 171 ~~-----------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+. ...+++++.+... ...++.+|++..-..-.|.. .+.+-+++|.++|++||+++|.||++.++.-
T Consensus 189 ~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GR 266 (460)
T PRK06105 189 FGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGR 266 (460)
T ss_pred cccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCc
Confidence 00 0124455555321 12356665555335555664 5888999999999999999999999976422
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh---------cccccCcHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM---------SSFGLVSSQT 308 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~---------~~~~~~s~~~ 308 (469)
.+.. .. .+... ..+.++ +++|.+| .| +.+|++++++ .+.+.+... ...+..++++
T Consensus 267 tG~~-f~-~~~~~--------v~PDi~---~~gK~lg-gG~~P~~av~~~~-~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 331 (460)
T PRK06105 267 TGNM-FG-CETFG--------IKPDIL---VMSKQLS-SSYQPLSAVLMNE-KVYDPIADESGKIGTFGHGFTASGHPVA 331 (460)
T ss_pred Cchh-hh-HHhcC--------CCCCee---eeecccc-cCcccceEEEEcH-HHHHHHhcccccCcccccCCCCCCCHHH
Confidence 2221 11 11111 223333 7899998 67 6899999954 444444321 1112255666
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh---cCCceecCCceEEEEEecccccccC-Ch----hHHHHHH
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK---AGISCLKSNAGLFCWVDMRHLLRSN-TF----EAEMELW 380 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~g~~v~~~~~g~~~~v~~~~~~~~~-~~----~~~~~l~ 380 (469)
..++.+.|+-..- +...+..++.-++|.+.|++ +++-.....-|+++.+++....... .+ .....+.
T Consensus 332 ~aaa~a~L~~i~~-----~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~ 406 (460)
T PRK06105 332 AAVALENLAIIEE-----RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARAN 406 (460)
T ss_pred HHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHH
Confidence 6665555542211 11222333333444444433 3322222233577777764211100 00 1112344
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
..+ .++||.+.+. .+.+|++... ++++++++++++|.+++++..+.
T Consensus 407 ~~~-~~~Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 453 (460)
T PRK06105 407 AAA-HEHGVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAAW 453 (460)
T ss_pred HHH-HHCCeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 444 4679999863 1379999876 49999999999999999876553
No 318
>PRK05965 hypothetical protein; Provisional
Probab=99.58 E-value=5.2e-12 Score=129.61 Aligned_cols=309 Identities=15% Similarity=0.104 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC---
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV--- 158 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~--- 158 (469)
+....+|+.+.+... -..+.+++++++++|++.+++.... + ..+|+....+|++....+....+.
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~ 165 (459)
T PRK05965 90 EPAIRLAAKLAERAP----GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAF 165 (459)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchh
Confidence 333455555543321 1346899999999999999987431 2 357888888888764321111111
Q ss_pred ---------EEEEeeccC--CCCcccCH--------HHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHH
Q 043923 159 ---------EIVPIQCTS--LNGFQITE--------TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVN 218 (469)
Q Consensus 159 ---------~~~~v~~~~--~~~~~~d~--------~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~ 218 (469)
.+..+|... ...+..|. +.+++.+... ...++.+|++.-.+...|. +.|.+-+++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 166 HRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 012222110 00011122 4555555421 1136777666644555676 468889999999
Q ss_pred HHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH
Q 043923 219 IITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 219 ~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~ 297 (469)
+|++||+++|.||+..++.-.+.- .. .+.. +..+.++ +++|.+| .| +.+|.+++.++ +.+.+..
T Consensus 244 lc~~~gillI~DEV~tGfGRtG~~-~a-~~~~--------gv~PDiv---~~gKgl~-gG~~Pi~av~~~~~-i~~~~~~ 308 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTGPL-FA-CEAE--------GVVPDLM---TVAKGLT-SGYVPMGAVLMSDH-VYQGIAD 308 (459)
T ss_pred HHHHcCCEEEEechhccCccCchh-hh-Hhhc--------CCCCCeE---Eechhhc-cCCcceeEEEEcHH-HHHHHhc
Confidence 999999999999999874222221 11 1111 1223444 5789998 89 59999999544 4443321
Q ss_pred -------h--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---CCceecCCceEEEEEecc
Q 043923 298 -------M--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---GISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 298 -------~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g~~v~~~~~g~~~~v~~~ 365 (469)
. ...+..++++..++.+.|+-.+- +...+..++.-++|.+.|+++ ++-.....-|+++.+.+.
T Consensus 309 ~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~ 383 (459)
T PRK05965 309 GAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE-----GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELV 383 (459)
T ss_pred cccccccccccCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEe
Confidence 1 11122566666666555542210 111222333334444545443 221112233577777764
Q ss_pred cccccCCh-----hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 366 HLLRSNTF-----EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 366 ~~~~~~~~-----~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
........ .....+...+ .++||.+.+. +++.+|+.... ++++++++++++|.+++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 384 ADKATKTPFDAALDPADRIFDRA-YANGLVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ccccccCCCCchhHHHHHHHHHH-HhCCeEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 31111000 1122344444 4679999753 24579998766 49999999999999999865
No 319
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.58 E-value=5.8e-12 Score=128.72 Aligned_cols=305 Identities=15% Similarity=0.121 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC----
Q 043923 91 FKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV---- 158 (469)
Q Consensus 91 Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~---- 158 (469)
....+|+.+.+... ...+.|++++++++|++.+++.... + ..+|+.....|++....+....|.
T Consensus 93 ~~~~la~~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 93 LAFELAERLAELAP----GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred HHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 34446666554321 1246899999999999999876431 1 357888888887764322111111
Q ss_pred --------EEEEeeccC---CCCccc--------CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHH
Q 043923 159 --------EIVPIQCTS---LNGFQI--------TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVN 218 (469)
Q Consensus 159 --------~~~~v~~~~---~~~~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~ 218 (469)
.+..+|... ...+.. ..+.+++.++.. ...++.+|++..-....|.. .+.+-+++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~ 246 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLRE 246 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHH
Confidence 122222210 000111 124555555421 11356666655435556764 46778899999
Q ss_pred HHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH
Q 043923 219 IITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 219 ~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~ 297 (469)
+|++||+++|+||++.++.-.+..+ ..+... ..+.+ -+++|.++ .| +.+|.+++++ .+.+.+..
T Consensus 247 lc~~~g~llI~DEV~tG~GRtG~~~--~~~~~g--------v~PDi---~~~gK~l~-gG~~Pi~av~~~~-~i~~~~~~ 311 (445)
T PRK09221 247 ICDKHGILLIFDEVITGFGRLGAAF--AAERFG--------VTPDI---ITFAKGLT-NGAIPMGAVIASD-EIYDAFMQ 311 (445)
T ss_pred HHHHcCCEEEEeehhhCCCcCchhh--HHHhcC--------CCCCE---EEeccccc-cCcccceeeEEcH-HHHHhhcc
Confidence 9999999999999997632112211 111111 11222 37899997 66 6899998854 44443321
Q ss_pred --------hcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCce-e-cCCceEEEEEecc
Q 043923 298 --------MSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISC-L-KSNAGLFCWVDMR 365 (469)
Q Consensus 298 --------~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v-~-~~~~g~~~~v~~~ 365 (469)
... ....++++..++.+.|+...- +...++.++.-+++.+.|+++ +... . ...-|.++.+.+.
T Consensus 312 ~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~-----~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~ 386 (445)
T PRK09221 312 GPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE-----EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELA 386 (445)
T ss_pred CcccccccccccCCCcCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEe
Confidence 011 112455665555555542210 123344555556666666654 2221 1 1123466666664
Q ss_pred cccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 366 HLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 366 ~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
....... ....+++..++ ++||.+.++ .+.+|++... ++++++++++++|++++++
T Consensus 387 ~~~~~~~-~~~~~~~~~~~-~~Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 387 PRPGAPG-ARGYEAFMKCF-EKGLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred ccccccc-chHHHHHHHHH-HCCeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 3111111 11234555555 669999753 2469999776 4999999999999999865
No 320
>PRK07481 hypothetical protein; Provisional
Probab=99.58 E-value=8.8e-12 Score=127.62 Aligned_cols=311 Identities=13% Similarity=0.069 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCC---
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGV--- 158 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~--- 158 (469)
+.+..+|+.+.+..+. -..+.+++++++++|++.+++.... +| .+|+...-.|++....+....+.
T Consensus 86 ~~~~~lae~L~~~~~~---~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 86 PRAIELSYELIDMFAP---EGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred HHHHHHHHHHHHhcCC---CCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 4445566666543210 1246899999999999999887531 23 57888888887754322211111
Q ss_pred ---------EEEEeeccC--CCCcc-cCHHHHHHHHH----HHH--hcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHH
Q 043923 159 ---------EIVPIQCTS--LNGFQ-ITETAIEEAYQ----LAQ--KRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNI 219 (469)
Q Consensus 159 ---------~~~~v~~~~--~~~~~-~d~~~l~~~i~----~~~--~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~ 219 (469)
.+..++.+. ...|+ .|++.+++.+. +.. ....++.+|++.--..-.|. ..+.+-+++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 112222110 00121 13444433221 111 11235666665533444566 4577889999999
Q ss_pred HHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh
Q 043923 220 ITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM 298 (469)
Q Consensus 220 ~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~ 298 (469)
|++||+++|.||+..++...+..+ . .+... ..+.++ +++|.+| .| +.+|.+++++ .+.+.+...
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~-a-~~~~g--------v~PDiv---~~gKgl~-gG~~Pi~av~~~~-~i~~~~~~~ 307 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWF-G-SRGWG--------VKPDIM---CLAKGIT-SGYVPLGATMVNA-RIADAFEAN 307 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhh-H-hhhcC--------CCCCEE---EEeeccc-CCCcCceEEEEcH-HHHHHHhcc
Confidence 999999999999998742222211 1 11111 223333 5689998 78 5999999954 454444321
Q ss_pred --------c-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEecc
Q 043923 299 --------S-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 299 --------~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~ 365 (469)
. .....++++..++.+.|+...- +...+..++.-++|.+.|++ +++......-|.++.+.+.
T Consensus 308 ~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~ 382 (449)
T PRK07481 308 ADFGGAIMHGYTYSGHPVACAAALATLDIVVR-----EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLV 382 (449)
T ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEec
Confidence 1 1122466666666666543211 11222233333444444443 3332222233577777774
Q ss_pred cccccC---C--hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 366 HLLRSN---T--FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 366 ~~~~~~---~--~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
...... . ......+...++ ++||.+.+.. +.+|++... ++++++++++++|.+++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 383 ADKATREPIDPSKGYANAVADVAR-ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ccccccCCCCchhHHHHHHHHHHH-hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 321100 0 111223445544 6799998642 248998765 49999999999999999764
No 321
>PRK07046 aminotransferase; Validated
Probab=99.57 E-value=4.4e-12 Score=129.67 Aligned_cols=330 Identities=14% Similarity=0.055 Sum_probs=183.6
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ ...+. .|.+.+++.+..+ ....+.. ..+....+|+.+.+.. ..+
T Consensus 74 G~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~-------------~~~~~~~---~~~~~~~lAe~l~~~~------~~~ 131 (453)
T PRK07046 74 GHRYDDFCLGDTGAMFGHSPAPVARALAEQAR-------------RGLTTML---PSEDAAWVGEELARRF------GLP 131 (453)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHHH-------------hCCCCCC---CCHHHHHHHHHHHHHh------CCC
Confidence 3468888655 33343 4666666665311 1111111 1344555666665432 357
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhh--hCC----------C------EEEEeeccCCCCcc
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKW--RTG----------V------EIVPIQCTSLNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~--~~g----------~------~~~~v~~~~~~~~~ 172 (469)
.+.++++++||...+++... ...++|+...-+|++....... ..+ . .++.+| |
T Consensus 132 ~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~- 204 (453)
T PRK07046 132 YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------F- 204 (453)
T ss_pred EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------C-
Confidence 89999999999999988753 2346788888888876322110 001 1 111111 1
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
.|++.+++.+.. .++.+|++. | ....|. ..+.+-++++.++|++||+++|.||+.. +-.+-... ....
T Consensus 205 nd~~~l~~~l~~-----~~vAavi~E-Pi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~---~~~~ 274 (453)
T PRK07046 205 NDLAALEAALAD-----GDVAAVLAE-PAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY---TRAH 274 (453)
T ss_pred CCHHHHHHHhCC-----CCeEEEEEC-CCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch---hHHh
Confidence 167888877742 256665554 6 333454 4566789999999999999999999986 21111111 1111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----------cccccCcHHHHHHHHHHhc--
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----------SSFGLVSSQTQYLLSALLS-- 317 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----------~~~~~~s~~~q~~~~~~l~-- 317 (469)
. ..+.++ +++|.+| .|+.+|.++++ +.+.+.+... ...+..++++..++.+.|+
T Consensus 275 g--------v~PDi~---t~gK~lg-gG~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l 341 (453)
T PRK07046 275 G--------LEPDFL---VVGKPIA-GGVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEV 341 (453)
T ss_pred C--------CCccce---eehhhhc-CCCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHH
Confidence 1 222333 6899998 89999999984 4454444321 0112246666666665554
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccc-cccc-------CChhHHHHHHHHHHHhCC
Q 043923 318 -DKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRH-LLRS-------NTFEAEMELWKKIVYDVK 388 (469)
Q Consensus 318 -~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~-~~~~-------~~~~~~~~l~~~ll~~~G 388 (469)
+.+. .+.+.+.-+++ ++.|.+.+.+.++.+....-|..+.+.+.. .... ........++..++ ++|
T Consensus 342 ~~~~~-~~~~~~~g~~l---~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 416 (453)
T PRK07046 342 MTEAA-YAHMLALAARL---AAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRG 416 (453)
T ss_pred hcccH-HHHHHHHHHHH---HHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCC
Confidence 3332 22222222222 333444444556543222223334444321 1100 01111233445555 569
Q ss_pred eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 389 LNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 389 I~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|.+.|.. +.++++.. +++++++++++++.+++++.
T Consensus 417 v~~~~~~-------~~~~~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 417 VLITPFH-------NMMLVCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred CEEeccc-------CcEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9997631 34788876 69999999999999998754
No 322
>PLN02263 serine decarboxylase
Probab=99.57 E-value=3.8e-12 Score=128.19 Aligned_cols=293 Identities=11% Similarity=0.042 Sum_probs=195.6
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCC--cEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTS--KIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~ 162 (469)
+..++++.+.+|+.+.++ .+++ .=++|+|+|+++..++.+..+ +...++++.-+|.++..++... |++++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~ll-gi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhc-CCcceE
Confidence 468999999999998877 3332 357899999999988877643 3347888899999999999887 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe-----EEEEeccccccc
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI-----HLISDEIYSGTV 237 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~-----~iI~Deay~~~~ 237 (469)
||.+ .++.+|+++|+++|.+. ..++-+|+.+-++-++|.+=+ +++|.++|+++|+ ++.+|.||+++.
T Consensus 205 Vp~d--~~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 205 VDTL--VSGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred eccC--CCCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 9987 45689999999999752 113556666777889999866 5558888889986 999999998864
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh------cccc-cCc-----
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM------SSFG-LVS----- 305 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~------~~~~-~~s----- 305 (469)
..-........+ ..+..-+..+.+|.++ ....+|.++..+..+ ..+... .... ..+
T Consensus 277 lPf~~~~~~~df----------~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~ 344 (470)
T PLN02263 277 MPFVKRAPKVTF----------KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHA 344 (470)
T ss_pred hhhcccccccCC----------CcCccEEEECCccccC-CCcCEEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHH
Confidence 421111111111 1123344568999886 778999999865433 222111 0001 111
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHH
Q 043923 306 SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 306 ~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~ 385 (469)
++..++....+. .+-+.+..++..+..+++.+.|++.|+.....+..+.+.+..+. + + ..
T Consensus 345 al~lW~~L~~~G-----~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~--------~--~----~~- 404 (470)
T PLN02263 345 PIFLWYTLNRKG-----YRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK--------D--E----EF- 404 (470)
T ss_pred HHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc--------h--H----Hh-
Confidence 222333333322 33346666666777788999999888876544444556565442 0 0 11
Q ss_pred hCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 386 DVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
..|..+..- +..++|++.. ++.+.++++++.|++..+..
T Consensus 405 ~~gW~L~~~-------~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 405 VRRWQLACQ-------GNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred hcceEEccC-------CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 236666531 2458998876 58899999999999887754
No 323
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.57 E-value=6.9e-12 Score=128.06 Aligned_cols=346 Identities=14% Similarity=0.073 Sum_probs=185.7
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ ...+. .+.+.+++++..+ .....+......+....+|+.+.+... -..+
T Consensus 45 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p----~~~~ 107 (442)
T PRK13360 45 GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAG-------------ELDYAPAFQMGHPKAFELANRIAEIAP----GGLN 107 (442)
T ss_pred CCEEEECchhHHHhccCCCCHHHHHHHHHHHH-------------hCCCcccCCcCCHHHHHHHHHHHHhCC----CCCC
Confidence 3467888655 23343 4666666665311 111111111113444556666654321 1246
Q ss_pred cEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccC---CC
Q 043923 113 KIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTS---LN 169 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~---~~ 169 (469)
.+++++++++|++.+++.... + ..+|+.....|++....+....|. .+..+|... ..
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~ 187 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARN 187 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhcc
Confidence 899999999999999876431 2 357888888888764322111111 112233211 00
Q ss_pred Cccc--------CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 170 GFQI--------TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 170 ~~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
.|.. ..+.+++.+... ...++.+|++.......|.. .+.+-+++|.++|++||+++|+||++.++.-.+
T Consensus 188 ~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG 265 (442)
T PRK13360 188 AFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG 265 (442)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 1111 134555555421 11355555554335556765 578889999999999999999999997642122
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH--------hcc-cccCcHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--------MSS-FGLVSSQTQY 310 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~--------~~~-~~~~s~~~q~ 310 (469)
..+ ..+... ..+.++ +++|.+| .| +.+|.+++++ .+.+.+.. ... ....++++..
T Consensus 266 ~~~--a~~~~g--------v~PDiv---t~gK~l~-gG~~P~gav~~~~-~i~~~~~~~~~~~~~~~~~~T~~g~pl~~a 330 (442)
T PRK13360 266 APF--AAQYFG--------VTPDLL---TCAKGLT-NGAIPMGAVFVSS-EIHDAFMQGPEAGIEFFHGYTYSGHPLACA 330 (442)
T ss_pred cch--hhhhcC--------CCCcee---eeeeccc-cCccceEEEEEcH-HHHHHhhcCCccccccccCCCCCCCHHHHH
Confidence 211 111111 112222 7899997 67 7899998854 44443321 111 1124566666
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cceec--CCceEEEEEecccccccCChhHHHHHHHHHHHhC
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLK--SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~--~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~ 387 (469)
++.+.|+-.. + +...++.++.-+++.+.|+++. ..... ...|++.-+.+........ ....+++..++ ++
T Consensus 331 aa~a~L~~l~---~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~-~~~~~~~~~l~-~~ 403 (442)
T PRK13360 331 AALATLDLYE---R--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG-KRAYEVFLKCF-EK 403 (442)
T ss_pred HHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc-hhHHHHHHHHH-HC
Confidence 6555554211 0 1223344444455555555431 21111 1224555555532111111 22234556555 66
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 388 KLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 388 GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
||.+.++ .+.+|++... ++++++++++++|.+++++
T Consensus 404 Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 404 GLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred CcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 9999753 2469999766 4999999999999999865
No 324
>PRK04311 selenocysteine synthase; Provisional
Probab=99.57 E-value=2.6e-12 Score=130.91 Aligned_cols=292 Identities=17% Similarity=0.172 Sum_probs=176.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC------hHHHHhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG------FDRDLKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~------~~~~~~~~~g~~~~ 161 (469)
+..+++.+|++++ .+..+++++++.|+..++.++ .+||.|++....+.. +...+... |++++
T Consensus 129 ~~~~e~~lA~l~G----------ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~~~-G~~l~ 196 (464)
T PRK04311 129 DRALAALLCALTG----------AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMRQA-GARLV 196 (464)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHHHC-CcEEE
Confidence 3677888888875 346778888889999888665 899999998764432 22344555 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCC--CC--CCCCHHHHHHHHHHHHhcCeEEEEecccccc-
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNP--LG--TTMSRNELNLLVNIITEKNIHLISDEIYSGT- 236 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NP--tG--~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~- 236 (469)
.++.+. ..++++++++|++ ++++|++.+++|| +| ...+ +++|+++|++||+++|+|.+.+.+
T Consensus 197 ~v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~ 263 (464)
T PRK04311 197 EVGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLV 263 (464)
T ss_pred EECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 988642 1468889998875 8999999999998 34 4455 666899999999999999964321
Q ss_pred ---ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHH
Q 043923 237 ---VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYL 311 (469)
Q Consensus 237 ---~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~ 311 (469)
.|+-...+.+.... ..+..+++.|.+|.+|-| ..|++++.++.+ +.+++ +.-...+......+
T Consensus 264 ~~~~~gl~~~p~~~~~l---------~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li-~~l~~~~~~r~lr~dk~~l~~ 331 (464)
T PRK04311 264 DLSQYGLPDEPTVQELL---------AAGVDLVTFSGDKLLGGP--QAGIIVGKKELI-ARLKKHPLKRALRVDKLTLAA 331 (464)
T ss_pred cchhccCCCCCchhhHH---------hcCCcEEEecCcccccCC--ceEEEEEcHHHH-HHHhhchhHHHHhcchHHHHH
Confidence 01101112222221 235678899999998634 589999855444 33331 10011122222223
Q ss_pred HHHHhc----Cch-h----hHHHHHHHHHHHHHHHHHHHHHHHhcC---C--ceecC----CceEE-------EEEeccc
Q 043923 312 LSALLS----DKK-F----TQNYISENKKRLKQRHRKLVSGLEKAG---I--SCLKS----NAGLF-------CWVDMRH 366 (469)
Q Consensus 312 ~~~~l~----~~~-~----~~~~~~~~~~~l~~~~~~l~~~L~~~g---~--~v~~~----~~g~~-------~~v~~~~ 366 (469)
..+.|. ... + ..+.+....+++.++.+.+.+.|+.+. + ++.+. .||-. ..+.+..
T Consensus 332 l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~ 411 (464)
T PRK04311 332 LEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP 411 (464)
T ss_pred HHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC
Confidence 222222 111 1 012233344667778888888887752 2 33322 01111 1122221
Q ss_pred ccccCChhHHHHHHHHHHHhCC--eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 367 LLRSNTFEAEMELWKKIVYDVK--LNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 367 ~~~~~~~~~~~~l~~~ll~~~G--I~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
. . ....++. ..|++.. |..+ ..++.+.+-+..+.+++++.++++|++++.
T Consensus 412 ~----~-~~~~~l~-~~lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 412 K----D-RSLEALA-ARLRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred C----C-CCHHHHH-HHHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 0 0 1122333 4455533 4443 236678898887899999999999998764
No 325
>PRK12403 putative aminotransferase; Provisional
Probab=99.57 E-value=1e-11 Score=127.50 Aligned_cols=295 Identities=16% Similarity=0.118 Sum_probs=156.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCCC-EEEEccCCCcChHH-HHhhhCCCE-----------EEEeeccC--C
Q 043923 111 TSKIVLTAGATSANETLMFCLA-------EPGE-AFLLPTPYYPGFDR-DLKWRTGVE-----------IVPIQCTS--L 168 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~-------~~gd-~Vl~~~P~y~~~~~-~~~~~~g~~-----------~~~v~~~~--~ 168 (469)
.+.+++++++++|+..+++... ++++ .|+...-+|++... .+... |.. +..+|... .
T Consensus 115 ~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s-~~~~~~~~~~~~~~~~~~~~p~~~~ 193 (460)
T PRK12403 115 YSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALG-GMKFMHEMGGLIPDVAHIDEPYWYA 193 (460)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcC-CCccccccCCCCCCCEEeCCCcccc
Confidence 4789999999999999998863 2333 34455556665432 22221 222 22222110 0
Q ss_pred CCcccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 169 NGFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 169 ~~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
..+... .+.+++.+.+. ...++.+|++..-..-.|.+ .+.+-+++|.++|++||+++|.||++.++.-.
T Consensus 194 ~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRt 271 (460)
T PRK12403 194 NGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRT 271 (460)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 000111 23344444321 11245555554324455764 57788999999999999999999999764212
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHh------cccccCcHHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKM------SSFGLVSSQTQYLL 312 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~------~~~~~~s~~~q~~~ 312 (469)
+..+ . .+... ..+.++ +++|.+| .|. .+|.+++. +.+.+.+... ......++++..++
T Consensus 272 G~~~-a-~e~~g--------v~PDiv---~~gK~lg-gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaa 336 (460)
T PRK12403 272 GEWF-A-HEHFG--------FEPDTL---SIAKGLT-SGYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYSGHPVAAAVA 336 (460)
T ss_pred chhh-h-hhhcC--------CCCCeE---EEccccc-ccccceEEEEEC-HHHHHHHhcCCCccccCCCCCCCHHHHHHH
Confidence 2211 1 11111 223333 4899998 885 99999984 4455444311 11112456666666
Q ss_pred HHHhcCchhhHHHHHHHH-HHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc-CChh----HHHHHHHHHHHh
Q 043923 313 SALLSDKKFTQNYISENK-KRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS-NTFE----AEMELWKKIVYD 386 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~-~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~-~~~~----~~~~l~~~ll~~ 386 (469)
.+.|+-.+- .+.+++.+ +.-...++.|.+..+++++......-|.++.+.+...... .... ....+... +.+
T Consensus 337 la~L~~i~~-~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 414 (460)
T PRK12403 337 IANLKALRD-EGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTI-GFE 414 (460)
T ss_pred HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHH-HHh
Confidence 665542211 11122221 1111122223333333443222233457777877432110 0000 01122233 346
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+||.+.+.. +.+|++... ++++++++++++|.+++++..
T Consensus 415 ~Gll~~~~~-------~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 415 EGVIIRSTL-------GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CCEEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 799997431 248898886 499999999999999998753
No 326
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.56 E-value=5.3e-12 Score=128.24 Aligned_cols=346 Identities=11% Similarity=0.075 Sum_probs=186.4
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ ...+. .+.+.+++++..+ ....+.-. .+....+|+.+.+..+ ...
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~---~~~~~~la~~L~~~~~----~~~ 110 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE-------------RGTSYGLT---SEQEILFAEELFSYLG----LED 110 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHH-------------hCCCCCCC---CHHHHHHHHHHHHhCC----CCc
Confidence 34467888765 33343 4667776665311 11122111 2344555655554322 223
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHH----HhhhCCCEEEE----e--eccCCC----CcccCH
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRD----LKWRTGVEIVP----I--QCTSLN----GFQITE 175 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~----v--~~~~~~----~~~~d~ 175 (469)
+.+.++++++||+..+++... .....|+...-+|++.... .... +..... . +..... .| .|+
T Consensus 111 ~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~d~ 188 (433)
T PRK00615 111 HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFS-ETSLDTLTHLVDTDLAHPLTLSLPY-NDF 188 (433)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccC-CCCcCcCCCCCCCCCCCCCeEeCCC-CCH
Confidence 689999999999999988753 2235788888888775311 1111 110000 0 000000 01 267
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
+.+++.+.+. ..++.+|++.......|... +.+-+++|.++|++||+++|+||++.++ ..+.. ...+...
T Consensus 189 ~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~--ga~~~~g--- 259 (433)
T PRK00615 189 QIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG--GAAAIYH--- 259 (433)
T ss_pred HHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh--HHHHhcC---
Confidence 8888877542 23555555443344557654 5778899999999999999999999764 22221 1111111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-----ccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS-----SFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
..+.++ +++|++| .|+.+|+++++ +.+.+.+.... ..+..+++...++.+.|+-.+- .+..++.
T Consensus 260 -----v~PDi~---~~gK~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~~~~ 328 (433)
T PRK00615 260 -----VKPDIT---VYGKILG-GGLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFYTQL 328 (433)
T ss_pred -----CCCCeE---EEccccc-CCcceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHHHHH
Confidence 112232 5899998 78899999995 44545442211 1112355565555555442111 1112222
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc-------CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 330 KKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS-------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~-------~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
.+.-...++.|.+.+.+.|+.+.....|.++.+.+...... ........+...++ ++||.+.|...- .
T Consensus 329 ~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~ 403 (433)
T PRK00615 329 STLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPFE----A 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCcccc----c
Confidence 22222222334455555565543323567777777532100 01122234555555 669999876421 1
Q ss_pred CeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 403 GWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 403 ~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+ ++.. +++++|+++++++.++++..
T Consensus 404 ~~--ls~~-ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 404 SF--LSSA-HSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cc--eecC-CCHHHHHHHHHHHHHHHHHH
Confidence 11 3444 49999999999999998764
No 327
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.56 E-value=2.4e-12 Score=127.78 Aligned_cols=265 Identities=15% Similarity=0.151 Sum_probs=161.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-CCC-CEEEEccCCCcChHHHHhhhCC-------C-----EEEEeeccCCCCcccCHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA-EPG-EAFLLPTPYYPGFDRDLKWRTG-------V-----EIVPIQCTSLNGFQITET 176 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~-~~g-d~Vl~~~P~y~~~~~~~~~~~g-------~-----~~~~v~~~~~~~~~~d~~ 176 (469)
.+.+++++++++|++.+++... .+| +.|+....+|.+....+....+ . .+..+|. .|++
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHH
Confidence 4689999999999999998763 234 7899999888876433322111 1 1122221 1567
Q ss_pred HHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 177 AIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 177 ~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
.+++.+.+ ++.+|++.......|. ..+.+.++++.++|++||+++|.||++.++ -.+. ..... ...
T Consensus 154 ~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~-~~a~~-~~g---- 220 (364)
T PRK04013 154 AAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIE-HYK---- 220 (364)
T ss_pred HHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc-hhHHH-hcC----
Confidence 77777753 7787776644555555 457788999999999999999999999874 2222 11111 111
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~ 335 (469)
..+.++ +++|.+| .|+.+|.++.... +.. .....++ ..++++..++.+.|+-.+- ++.+++.++.
T Consensus 221 ----v~PDiv---~~gK~lg-gG~P~~a~~~~~~-~~~-~~~~~T~-~gnp~~~aaa~a~l~~i~~-~~l~~~~~~~--- 285 (364)
T PRK04013 221 ----VEPDIV---TMGKGIG-NGVPVSLTLTNFD-VER-GKHGSTF-GGNPLACKAVAVTLRILRR-ERLVEKAGEK--- 285 (364)
T ss_pred ----CCCCEE---Eeccccc-CCceeEEEEeccc-ccC-CCcCCCC-CcCHHHHHHHHHHHHHHHh-ccHHHHHHHH---
Confidence 223444 5699998 7999999998544 211 1111222 2566666666665543211 1112222221
Q ss_pred HHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCH
Q 043923 336 RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSE 414 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~ 414 (469)
+. .+.. .+-.....-|+++-+++... ...+...++ ++|+.+.+. +.+.+|+.... +++
T Consensus 286 ----l~-~l~~-~~v~~vRG~Gl~~gve~~~~--------~~~i~~~~~-~~Gll~~~~------g~~vlr~~Ppl~it~ 344 (364)
T PRK04013 286 ----FI-EIKG-ERVVTTRGRGLMIGIVLKKP--------VGKYVEELQ-NRGYLVHTA------GQRVIRLLPPLIISK 344 (364)
T ss_pred ----HH-Hhcc-CcceeeeeCcEEEEEEeCCc--------HHHHHHHHH-hCCcEEeeC------CCCEEEEeCCcccCH
Confidence 21 2221 11011122368888888531 123455544 679999753 23679999877 499
Q ss_pred HHHHHHHHHHHHHHHhh
Q 043923 415 DTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 415 e~i~~~l~~L~~~l~~~ 431 (469)
+++++++++|.+++++.
T Consensus 345 ~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 345 DTMEEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998753
No 328
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.56 E-value=4.8e-12 Score=128.49 Aligned_cols=340 Identities=14% Similarity=0.072 Sum_probs=187.4
Q ss_pred CCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+ .+.+ ..+.+.+++++..+. .... .+. . -..+....+|+.+.+..+ ...+
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------~~~~-~~~-~-~~~~~~~~la~~L~~~~p----~~~~ 104 (428)
T PRK07986 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDA----------MSHV-MFG-G-ITHPPAIELCRKLVAMTP----QPLE 104 (428)
T ss_pred CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhh----------cCCc-ccc-c-cCCHHHHHHHHHHHhhCC----CCcC
Confidence 3457888765 3333 346677776653211 0000 000 0 012444556666654322 2246
Q ss_pred cEEEeCChHHHHHHHHHHhcC-------CCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCC---C
Q 043923 113 KIVLTAGATSANETLMFCLAE-------PGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSL---N 169 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~-------~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~---~ 169 (469)
.+++++++++|++.+++.... ...+|+....+|++....+....+- .++.+|.... .
T Consensus 105 ~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 184 (428)
T PRK07986 105 CVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDG 184 (428)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccch
Confidence 899999999999999886531 2367888888887754222111121 1112222100 0
Q ss_pred Cc-ccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 170 GF-QITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 170 ~~-~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.| .-|++.+++.++. .+.++.+|++... +.-.|. ..+.+.+++|.++|++||+++|+||++.++.-.+..+ .
T Consensus 185 ~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a- 259 (428)
T PRK07986 185 EWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-A- 259 (428)
T ss_pred hhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-e-
Confidence 01 1245666666643 1235666555532 444565 4567899999999999999999999997632222211 1
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--------cccccCcHHHHHHHHHHhc
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--------SSFGLVSSQTQYLLSALLS 317 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--------~~~~~~s~~~q~~~~~~l~ 317 (469)
.+... ..+.++ +++|++| .| +.+|.++++ +.+.+.+... .+++ .++++..++.+.|+
T Consensus 260 ~~~~g--------v~PDi~---t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~ 325 (428)
T PRK07986 260 CEHAG--------IAPDIL---CLGKALT-GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFM-GNPLACAVANASLS 325 (428)
T ss_pred ecccC--------CCCCEE---Eechhhh-CCcccCcchhch-HHHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHH
Confidence 11111 112233 5899997 88 588888884 4455544321 1222 45666666555554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCC
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
...- ...+++.+++-+++.+.|+++ ..... ....|+++.+.+.... ....+...+ .++||.+.+.
T Consensus 326 ~i~~-----~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~------~~~~~~~~l-~~~Gl~~~~~ 393 (428)
T PRK07986 326 LLES-----GDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV------NMAALQRFF-VEQGVWIRPF 393 (428)
T ss_pred HHHh-----CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc------cHHHHHHHH-HHCCcEEEec
Confidence 2210 012333444444555555543 11111 1123567777775321 122344554 4679999864
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
. +.+|+.... ++++++++++++|.+++++.
T Consensus 394 g-------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 394 G-------KLIYLMPPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred C-------CEEEEeCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 1 379998776 49999999999999998643
No 329
>PRK07483 hypothetical protein; Provisional
Probab=99.55 E-value=9.6e-12 Score=127.03 Aligned_cols=355 Identities=13% Similarity=0.092 Sum_probs=188.3
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ .+.+. .|.+.+++++..+ ....+....-..+....+|+.+.+... -.
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p----~~ 89 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQID-------------RLAYAHTSFFTTEPAEALADRLVAAAP----AG 89 (443)
T ss_pred CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC----CC
Confidence 344568998765 44443 4666666665311 111001000113444566666654321 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNG 170 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~ 170 (469)
.+.+++++++++|+..+++.... +| .+|+...-+|++....+....|-. +..++.. ..
T Consensus 90 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~--~~ 167 (443)
T PRK07483 90 LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPC--YA 167 (443)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCC--cc
Confidence 46899999999999999886431 23 468888888877643222111211 1112211 01
Q ss_pred ccc-----C--------HHHHHHHHHHHHhcCCceeEEEEecC-CC-CCC-CCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 171 FQI-----T--------ETAIEEAYQLAQKRHLKVKGVLVTNP-SN-PLG-TTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 171 ~~~-----d--------~~~l~~~i~~~~~~~~~~~~vvl~~P-~N-PtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
|.. + ++.+++.+.. ....++.+|++. | .- -.| ...+.+-+++|.++|++||+++|.||+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvivE-Piqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 168 YREQRAGESDEAYGQRLADELEAKILE--LGPDTVAAFVAE-TVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHh--cCCCceEEEEEe-CcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 110 0 1344444431 112356666665 5 32 235 45678899999999999999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHh------cccccCcHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKM------SSFGLVSSQ 307 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~------~~~~~~s~~ 307 (469)
++.-.+.- .. .+... ..+.++ +++|.+| .|+ .+|.+++.++ +.+.+... ...+..+++
T Consensus 245 GfGRtG~~-~a-~~~~g--------v~PDiv---~~gK~l~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~h~~T~~gnpl 309 (443)
T PRK07483 245 GMGRTGTL-FA-CEEDG--------VAPDLV---TIAKGLG-AGYQPIGAVLASDR-IYDAIADGSGFFQHGHTYLGHAT 309 (443)
T ss_pred CcccCcHH-HH-HhhcC--------CCCCee---eehhhhc-cCccccEEEEEcHH-HHHHHhcCCCccccCCCCCCCHH
Confidence 74211211 11 11111 223334 5799998 896 9999999544 44444321 111225666
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH----hcCCceecCCceEEEEEecccccccCC-----hhHHHH
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE----KAGISCLKSNAGLFCWVDMRHLLRSNT-----FEAEME 378 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~----~~g~~v~~~~~g~~~~v~~~~~~~~~~-----~~~~~~ 378 (469)
+..++.+.|+-.+- +...+..++.-++|.+.|+ ++++......-|+++.+++........ ......
T Consensus 310 ~~aaa~a~l~~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~ 384 (443)
T PRK07483 310 ACAAALAVQRVIAE-----DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHAR 384 (443)
T ss_pred HHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHH
Confidence 66666665542210 1112222233333444443 333211122335777777642211000 011223
Q ss_pred HHHHHHHhCCeEEeCCCC-CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 379 LWKKIVYDVKLNISPGSS-CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~-f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
++..++ ++||++.+... ......+.+|+.... ++++++++++++|.+++++..
T Consensus 385 ~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 385 IKREAM-ARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred HHHHHH-HCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 455555 67999986421 101113579998876 499999999999999998644
No 330
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=6.1e-12 Score=127.67 Aligned_cols=337 Identities=14% Similarity=0.088 Sum_probs=182.7
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.....+||+..+ ...+. .+.+.+++++..+. .. ...+... ..+....+|+.+.+... -.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~----------~~-~~~~~~~--~~~~~~~lae~L~~~~p----~~ 99 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDT----------MS-HVMFGGL--THEPAIKLTRKLLNLTD----NG 99 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHh----------CC-CcccCCc--CCHHHHHHHHHHHhhCC----CC
Confidence 344568898765 33343 46666666653211 00 0011101 12334445555543321 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLN 169 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~ 169 (469)
.+.+++++++++|++.+++.... ++ .+|+....+|++....+....+- .+..+|...
T Consensus 100 ~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~-- 177 (422)
T PRK05630 100 LDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP-- 177 (422)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc--
Confidence 46899999999999999887431 22 57888888887754332211121 112233221
Q ss_pred CcccCH-------HHHHHHHHHHHhcCCceeEEEEecC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 170 GFQITE-------TAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 170 ~~~~d~-------~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
....+. +.+++.+.+ ++.+|++.-- ..-.|. ..+.+-+++|.++|++||+++|.||++.++...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG 251 (422)
T PRK05630 178 VRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG 251 (422)
T ss_pred ccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc
Confidence 011111 223333321 6777666631 555676 4577899999999999999999999997742112
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh---------cccccCcHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM---------SSFGLVSSQTQY 310 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~---------~~~~~~s~~~q~ 310 (469)
.. .. .+... ..+.++ +++|.++ .| ..+|++++++ .+.+.+... .++ ..++++..
T Consensus 252 ~~-~a-~~~~g--------v~PDi~---t~gK~l~-gG~~p~~av~~~~-~i~~~~~~~~~~~~~~h~~T~-~g~Pla~a 315 (422)
T PRK05630 252 EL-FA-TLAAG--------VTPDIM---CVGKALT-GGFMSFAATLCTD-KVAQLISTPNGGGALMHGPTF-MANPLACA 315 (422)
T ss_pred hh-hH-HHhcC--------CCCCee---eeechhh-cCccccceeeccH-HHHHHHhccCCCCccccCCCC-cCCHHHHH
Confidence 11 11 11111 222333 7899997 77 4889999854 444444321 122 24566665
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec--CCceEEEEEecccccccCChhHHHHHHHHHHHhC
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK--SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~ 387 (469)
++.+.|+...- . ..++.+.+.-++|.+.|+++ ...... ..-|+++-+.+.... ....+...+ .++
T Consensus 316 aa~aaL~~l~~-~----~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~------~~~~~~~~~-~~~ 383 (422)
T PRK05630 316 VAHASLEIIET-G----MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV------DMEEATQAA-VDH 383 (422)
T ss_pred HHHHHHHHHHh-C----cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc------cHHHHHHHH-HHC
Confidence 55555442210 0 11223333334444444432 111111 122577878875321 112344444 467
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 388 KLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 388 GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
||.+.+. .+.+|+.... ++++++++++++|.++++..
T Consensus 384 Gl~~~~~-------g~~l~~~PpL~it~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 384 GVWLRPF-------GRLVYVMPPYITTSEQIAQICAALAAAVKAK 421 (422)
T ss_pred CeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHhcc
Confidence 9999753 1478998876 49999999999999999754
No 331
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=6e-12 Score=127.93 Aligned_cols=283 Identities=14% Similarity=0.090 Sum_probs=165.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC-------------EEEEeeccCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCTSLN 169 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~ 169 (469)
.+.+++++++++|++.+++.... + ..+|+....+|++....+....|- .+..+|... .
T Consensus 104 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~ 182 (429)
T PRK06173 104 LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-I 182 (429)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-c
Confidence 46899999999999999887531 2 357888888887742211111010 011222210 0
Q ss_pred Ccc-----cCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 170 GFQ-----ITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 170 ~~~-----~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
.+. -+++.+++.++. .+.++.+|++.-- ..-.|.. .+.+-+++|.++|++||+++|+||++.++.-.+..
T Consensus 183 ~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 259 (429)
T PRK06173 183 KFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKL 259 (429)
T ss_pred ccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcc
Confidence 010 134556666642 2336777666632 5556765 78899999999999999999999999763111221
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-------hcccccCcHHHHHHHHH
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-------MSSFGLVSSQTQYLLSA 314 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~ 314 (469)
+ . .+... ..+. |+ +++|.++ .| +.+|.+++.+ .+.+.+.. ....+..++++..++.+
T Consensus 260 ~-a-~~~~g--------v~PD-iv--~~gK~l~-gG~~p~~a~~~~~-~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a 324 (429)
T PRK06173 260 F-A-LEHAG--------VVPD-IM--CIGKALT-GGYLTLSATITTE-AIAQTICSGEAKCFMHGPTFMANPLACAIAAE 324 (429)
T ss_pred h-H-HHhcC--------CCCC-EE--Eeehhhh-CCccccceEEecH-HHHHHHhcCCCCccccCCCCCcCHHHHHHHHH
Confidence 1 1 11111 1122 33 4899997 78 4788888844 44444421 11111245566665555
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC--CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEE
Q 043923 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS--NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNI 391 (469)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~--~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v 391 (469)
.|+-.. + +..++.+.++-++|.+.|+++ +...... ..|+++-+.+.... ....+...+ .++||.+
T Consensus 325 ~l~~i~---~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~------~~~~i~~~l-~e~Gi~v 392 (429)
T PRK06173 325 SIRLLL---E--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV------NMATLQPRF-VEHGIWV 392 (429)
T ss_pred HHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc------cHHHHHHHH-HHCCeEE
Confidence 554211 1 112444455555666666644 3332221 23577777775321 122344444 5679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 392 SPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 392 ~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+.. +.+|+.... ++++++++++++|.+++.+.
T Consensus 393 ~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 393 RPFG-------KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred EecC-------CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 7641 379999887 49999999999999999754
No 332
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.55 E-value=1.2e-11 Score=114.07 Aligned_cols=285 Identities=19% Similarity=0.205 Sum_probs=192.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-CcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-YPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+--.++...++.++++++-.++.|||.|++.... |..-...+...+|++|..++.+. +-...++.+.+++.++
T Consensus 68 ~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh---- 141 (385)
T KOG2862|consen 68 AQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQH---- 141 (385)
T ss_pred CceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhc----
Confidence 3345566668889999999999999999887664 54433333333499999998774 3357789999999864
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+++++++++-...||..-+. +..+-++|++|+.++++|.+-+ .++.++. + |.++..+....
T Consensus 142 -~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~VaS---lggt~F~-m------------DewgVDvaytg 202 (385)
T KOG2862|consen 142 -KPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVAS---LGGTEFE-M------------DEWGVDVAYTG 202 (385)
T ss_pred -CCceEEEEecCccccccchH--HHHHHHHhhcCCeEEEEechhh---cCCccce-e------------hhhcccEEEec
Confidence 99999999998899998762 3346778899999999999987 5555432 1 24566677667
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhc--------------cc-----------ccCcHHHHHHHHHHhcCchhhHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMS--------------SF-----------GLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--------------~~-----------~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
--|++|+|. .++-+..++... ..++... .+ .+++....+.+.++|... .++
T Consensus 203 SQKaL~aP~-GLsiisfS~ka~-~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I--~ee 278 (385)
T KOG2862|consen 203 SQKALGAPA-GLSIISFSDKAL-EAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALI--AEE 278 (385)
T ss_pred chhhcCCCC-CcceeecCHHHH-HHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHH--HHH
Confidence 779998542 344444434333 3332211 11 224455566666666543 255
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceecC----CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKAGISCLKS----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
-++...++.++..++++..|+++|++..-. .....-.+.+|...+.+ +.+.++...+++.+.-|- ++.
T Consensus 279 GL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~------dVv~~~~~~~~vei~ggl--g~~ 350 (385)
T KOG2862|consen 279 GLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWK------DVVAYAMSHYVVEIGGGL--GPT 350 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHH------HHHHHHHHhcCEEecccc--CCC
Confidence 578888999999999999999988753211 11112345666554443 466777766677665443 444
Q ss_pred CCCeEEEEeecC--CHHHHHHHHHHHHHHHHhhc
Q 043923 401 EPGWFRVCFANM--SEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 401 ~~~~iRi~~~~~--~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+..+||.+-.. +.+.++..++.|+.++.+..
T Consensus 351 ~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 351 VGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred cccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 567899998542 78999999999998887654
No 333
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=1.1e-11 Score=127.16 Aligned_cols=352 Identities=13% Similarity=0.052 Sum_probs=190.0
Q ss_pred CCCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCC-CCC
Q 043923 36 NPTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKV-TFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~-~~~ 110 (469)
....+||+..+ .+.+ ..+.+.+++++..+. +...... ... .+....+|+.+.+...... .-.
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------l~~~~~~--~~~-~~~~~~lae~L~~~~p~~~~~~~ 128 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGE----------LEQVMLA--GFT-HEPAVQLAEQLLAIAPRQDGRAP 128 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHh----------CCCcccc--ccC-CHHHHHHHHHHHHhCCCcccCCC
Confidence 34468888765 4444 346666666553110 0001110 011 2334556666654321000 002
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCC-
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLN- 169 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~- 169 (469)
.+.+++++++++|+..+++.... + ..+|+...-+|++....+....|.. +..+|.....
T Consensus 129 ~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~ 208 (472)
T PRK08742 129 LSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYL 208 (472)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccc
Confidence 35899999999999999887531 2 3578888888877653332221211 1222221100
Q ss_pred -Cccc--------CHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 170 -GFQI--------TETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 170 -~~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
.+.. +++.+++.++. ...++.+|++.- ...-.|. ..+.+-++++.++|++||+++|.||+..++..
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGR 285 (472)
T PRK08742 209 AEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGR 285 (472)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 0011 23455555532 223666666553 1455676 56889999999999999999999999987432
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHH--------hcccccCcHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATK--------MSSFGLVSSQTQ 309 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~--------~~~~~~~s~~~q 309 (469)
.+.-+ . .+... ..+.++ +++|.+| .|+ .+|.+++.+ .+.+.+.. ....+..++++.
T Consensus 286 tG~~~-a-~e~~g--------v~PDiv---~~gKgl~-gG~~Plaav~~~~-ei~~~~~~~~~~~~~~h~~T~~gnpl~~ 350 (472)
T PRK08742 286 TGTLF-A-CEQAG--------VMPDLL---CLSKGLT-GGFLPLSAVLATQ-QLYDAFLDDSRERAFLHSHSYTGNPLAC 350 (472)
T ss_pred Cccch-H-HHhcC--------CCCCEE---EEccccc-CCCCCcceeeccH-HHHHHhhccCccCccCcCCCCCccHHHH
Confidence 23211 1 11111 223444 5689998 884 999999954 44443321 011122466666
Q ss_pred HHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCCh-----hHHHHHHH
Q 043923 310 YLLSALLSD---KKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTF-----EAEMELWK 381 (469)
Q Consensus 310 ~~~~~~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~-----~~~~~l~~ 381 (469)
.++.+.|+- .+. .+...+.-+++ ..+.+.+.++.+-.....-|+++.+.+......... .....+..
T Consensus 351 Aaa~a~L~~i~~~~l-~~~~~~~g~~l----~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~ 425 (472)
T PRK08742 351 AAALATLDIFADDDV-IARNQPTAARM----TQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYR 425 (472)
T ss_pred HHHHHHHHHHHHCCH-HHHHHHHHHHH----HHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHH
Confidence 666655542 222 22222222222 223333444432112223457777877532111110 01123445
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.++ ++||.+.+. .+.+|+.... ++++++++++++|.+++++.
T Consensus 426 ~~~-~~Gll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 426 AAL-ARGVVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHH-HCCeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 554 679999863 1479999887 49999999999999999764
No 334
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.54 E-value=1.2e-12 Score=130.50 Aligned_cols=285 Identities=12% Similarity=0.086 Sum_probs=170.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCC-CCcEEEe-CChHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHHHhhh-CCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFD-TSKIVLT-AGATSANETLMFCLAEPGEAFLLPTPYYPG-FDRDLKWR-TGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t-~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~~~~~-~g~~~~~v 163 (469)
+.+.|+.++++++ ++ ..+|+++ +|+|.+++.++..++.+ +.+++..-.|.. +.+.+... .+.++..+
T Consensus 43 ~~~~r~~l~~l~~--------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 43 VGRVREGLAELFS--------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEE
Confidence 4667777888875 43 3478876 55999999999998743 333343333432 22233321 02255555
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+... .++. .+ .+++++|.+++-.|.||...|.+++ ++++|+++|+|.+.+ ++..+
T Consensus 114 ~~~~~~--~~~~-----~~------~~~~~lV~~~h~et~tG~~~pi~~I------~~~~g~~~iVDavqs---~g~~~- 170 (361)
T TIGR01366 114 TADPGS--APEP-----QA------DPGVDVIAWAHNETSTGVAVPVRRP------EGSDDALVVIDATSG---AGGLP- 170 (361)
T ss_pred ecCCCC--CCCC-----cc------CCCCCEEEEcccCCccceecccccc------cccCCCeEEEEcCcc---ccCCC-
Confidence 554311 2322 11 2389999999999999999997664 478999999999997 54433
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH---------h-------------ccc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK---------M-------------SSF 301 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~---------~-------------~~~ 301 (469)
..+. +..+++.|..|.+|.+| .++.++.+++.+.+.... + ..+
T Consensus 171 idv~--------------~~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~ 235 (361)
T TIGR01366 171 VDIA--------------ETDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTY 235 (361)
T ss_pred CCHH--------------HCCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCC
Confidence 2222 13467889999999774 255556655444221100 0 112
Q ss_pred ccCcHHHHHHHHHHhcCchhhHHH--HHHHHHHHHHHHHHHHHHHHhcC-Cceec-CC---ceEEEEEecccccccCChh
Q 043923 302 GLVSSQTQYLLSALLSDKKFTQNY--ISENKKRLKQRHRKLVSGLEKAG-ISCLK-SN---AGLFCWVDMRHLLRSNTFE 374 (469)
Q Consensus 302 ~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-~~v~~-~~---~g~~~~v~~~~~~~~~~~~ 374 (469)
++++.....++.++++.. .+. ++...++.++..+++.+.+.+.+ ++... .. ......+.+++..+
T Consensus 236 ~tp~i~~i~~l~~al~~l---~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~----- 307 (361)
T TIGR01366 236 NTPAIATLALLAEQIDWM---NGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDID----- 307 (361)
T ss_pred CCchHHHHHHHHHHHHHH---HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccC-----
Confidence 223333222333333221 111 45566778888888999999886 44432 11 11112334433221
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 375 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 375 ~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
..++...| +++||.+.++. +..+.+.+|+++.. .+++++++++++|+++++++
T Consensus 308 -~~~v~~~L-~~~gI~i~~~~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 308 -AATVAKIL-RANGIVDTEPY--RKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred -HHHHHHHH-HHCCCeeccCc--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 22344454 56799997764 22235689999977 59999999999999988763
No 335
>PRK06149 hypothetical protein; Provisional
Probab=99.54 E-value=1.3e-11 Score=137.54 Aligned_cols=350 Identities=13% Similarity=0.113 Sum_probs=188.3
Q ss_pred CCCeeeeeccccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 37 PTGIIQMGLAENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
...+||+..+...+. .+.+.+++.+.... ......|. .+....+|+.+.+... -..+.+
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~----------l~~~~~~~-----~~~~~elae~L~~~~p----~~~~~v 644 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSL----------LNTNSRFH-----YAAVAEFSERLAALAP----DGLDTV 644 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHh----------cccccccc-----CHHHHHHHHHHHHhCC----CCcCEE
Confidence 456788876654454 46666666543111 01111121 2334444555443221 124689
Q ss_pred EEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHH-hhhC----CC--------EEEEeeccC--CCCccc-C--
Q 043923 115 VLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDL-KWRT----GV--------EIVPIQCTS--LNGFQI-T-- 174 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~-~~~~----g~--------~~~~v~~~~--~~~~~~-d-- 174 (469)
++++++++|+..+++... .....|+...-.|++....+ .... +. .+..++... ...|.. +
T Consensus 645 ~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~ 724 (972)
T PRK06149 645 FLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSA 724 (972)
T ss_pred EEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccH
Confidence 999999999999998431 22356777777777543221 1100 00 112222211 011211 1
Q ss_pred ---HHHHHHHHHHHHhcCCceeEEEEecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 175 ---ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 175 ---~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
.+.++..++.....+.++.+||+..-....| ...+.+-++++.++|++||+++|.||++.++.-.+..+... +..
T Consensus 725 ~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~-e~~ 803 (972)
T PRK06149 725 ADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGF-EQQ 803 (972)
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhh-hhc
Confidence 2445555543322233566655542233344 56788899999999999999999999997642222211111 111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh----cccccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM----SSFGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
+..+.++ +++|.+| .|+.+|++++. +.+.+.+... .++ ..++++..++.+.|+-..-
T Consensus 804 --------gv~PDiv---t~gK~lg-~G~Pl~av~~~-~~i~~~~~~~~~~~sT~-~gnP~~~aaala~L~~i~~----- 864 (972)
T PRK06149 804 --------GVVPDII---TMAKGMG-NGHPLGAVITR-REIAEALEAEGYFFSST-GGSPVSCRIGMAVLDVLRE----- 864 (972)
T ss_pred --------CCCCCEE---Eeccccc-CCeeeEEEEEc-HHHHhhhccCCcccCCC-CCCHHHHHHHHHHHHHHHh-----
Confidence 1223333 7899998 89999999994 4455544321 122 2566666666666542210
Q ss_pred HHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+...+..++.-++|.+.|++ +++......-|+++.+++...... ........++..++ ++||.+.+...
T Consensus 865 e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g~---- 939 (972)
T PRK06149 865 EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTGD---- 939 (972)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecCC----
Confidence 11222233333344444443 333222223357877877421110 11122334555555 57999987421
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 401 EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 401 ~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
..+.+|+.... ++++++++++++|.+++.+
T Consensus 940 ~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 940 HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 24679988775 4999999999999999864
No 336
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=3e-11 Score=123.92 Aligned_cols=292 Identities=15% Similarity=0.039 Sum_probs=162.2
Q ss_pred cEEEe-CChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCC--Ccc---
Q 043923 113 KIVLT-AGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLN--GFQ--- 172 (469)
Q Consensus 113 ~i~~t-~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~--~~~--- 172 (469)
.++++ +++++|+..+++... ....+|+...-+|++....+....|. .+..+|.+... .|.
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 56564 799999999988753 23467888888887764332221111 12233322110 010
Q ss_pred -----cCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 173 -----ITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 173 -----~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
.+++.+++.+++......++.+|++. | ..-.|.+ .+.+-++++.++|++||+++|.||+..++.-.+.- ..
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~E-Piqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~-~a 285 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILE-VVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKM-FA 285 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEc-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHH-HH
Confidence 12456666664321111246665554 5 3344654 56999999999999999999999999874212211 11
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhH
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
.+.. +..+.++ +++|.+| .|+.+|.+++.+. + +.+... ...+..++++..++.+.|+...- .
T Consensus 286 -~e~~--------gv~PDiv---~~gKglg-gG~PlsAv~~~~~-~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~-~ 349 (464)
T PRK06938 286 -FEHA--------GIIPDVV---VLSKAIG-GSLPLAVVVYREW-L-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE-H 349 (464)
T ss_pred -HHhc--------CCCCCEE---Eeecccc-CCCceEEEeehhH-h-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH-h
Confidence 1111 1223444 5689998 8999999998543 3 322211 11122566776666666543211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----hcCCceecCCceEEEEEeccccccc------C--ChhHHHHHHHHHHHhCCeEE
Q 043923 324 NYISENKKRLKQRHRKLVSGLE----KAGISCLKSNAGLFCWVDMRHLLRS------N--TFEAEMELWKKIVYDVKLNI 391 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~----~~g~~v~~~~~g~~~~v~~~~~~~~------~--~~~~~~~l~~~ll~~~GI~v 391 (469)
...+..++.-++|.+.|+ ++++......-|+++.+.+...... . .......++..++ ++||.+
T Consensus 350 ----~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~ 424 (464)
T PRK06938 350 ----RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLIL 424 (464)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEE
Confidence 112222222333333333 3343222233457777877432110 0 0011223445554 679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 392 SPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 392 ~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.++..+ .+.+|+.... +++++++++++++.+++.+.
T Consensus 425 ~~~g~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 425 ELGGRH----GSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred eecCCC----CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 865322 3579998765 49999999999999998753
No 337
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.54 E-value=1.3e-11 Score=135.29 Aligned_cols=310 Identities=15% Similarity=0.121 Sum_probs=186.1
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE-eCChHHHHHHHHHHh----cCCCC----EEEEccCCCcChHHHHhhhC
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVL-TAGATSANETLMFCL----AEPGE----AFLLPTPYYPGFDRDLKWRT 156 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~-t~G~~~al~~~~~~l----~~~gd----~Vl~~~P~y~~~~~~~~~~~ 156 (469)
+|+.++...+.+++.+..| .+++.+ .+|++++....+.++ .++|+ +|+++...|......+...
T Consensus 538 qG~l~~i~e~q~~l~eltG------~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~- 610 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITG------YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA- 610 (954)
T ss_pred HHHHHHHHHHHHHHHHHHC------CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC-
Confidence 4577888888888888766 234444 456666654443333 24565 6999999998877778777
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|++++.++++.+ ..+|+++|++++++. ..++.+|++++|++-.+...+ +++|+++|+++|+++++|.++...
T Consensus 611 G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 611 GMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred CCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhh
Confidence 999999998753 468999999988641 125778889988875333445 666899999999999999999632
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC----CCcceEEEEEecCHHHHHHHHHh-------c-ccccC
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG----LPGFRVGAIYSNDDMVVAAATKM-------S-SFGLV 304 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~GlRiG~li~~~~~~~~~~~~~-------~-~~~~~ 304 (469)
... +.... ..+-.++..|++|+|+ ..|-.+|++.+.+ .+...+... . ..+.+
T Consensus 683 l~~---l~~pg------------~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~g~v 746 (954)
T PRK05367 683 QVG---LARPG------------DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGIGAV 746 (954)
T ss_pred ccC---CCChh------------hcCCCEEEecCcccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCcCcc
Confidence 111 11111 2245677889999975 3445578887743 222111100 0 01112
Q ss_pred c--HHHHHH----HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceE--EEEEecccccccCChhH
Q 043923 305 S--SQTQYL----LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGL--FCWVDMRHLLRSNTFEA 375 (469)
Q Consensus 305 s--~~~q~~----~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~--~~~v~~~~~~~~~~~~~ 375 (469)
+ ...+.. +..++... ..+-+++..+..-.+.+++.+.|++. .+.+..+.+-+ =+.++++....... ..
T Consensus 747 ~ta~~g~al~~~~a~~yi~~~--G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g-~~ 823 (954)
T PRK05367 747 SAAPFGSASILPISWMYIRMM--GAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTG-IT 823 (954)
T ss_pred hhHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCC-CC
Confidence 2 221111 11122211 13334444454456778888888764 33332221100 02233321111001 12
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++.++| .++|+.... ..|. .++.+||+++. .+++++++++++|+.+.++.++
T Consensus 824 ~~di~krL-~d~G~~~~t-~~~p--v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 824 VDDIAKRL-IDYGFHAPT-MSFP--VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHHH-HHCCCeEee-cCCc--cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 23566776 577998764 2343 36779998876 3899999999999998877766
No 338
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.53 E-value=2e-12 Score=135.99 Aligned_cols=173 Identities=15% Similarity=0.184 Sum_probs=119.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-HhhhCCCEEEEeecc
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-LKWRTGVEIVPIQCT 166 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-~~~~~g~~~~~v~~~ 166 (469)
+.+..+.+|+.|+ .....+++||+|.++.+++.+++.+||.|+++..+|-+..+. +.+. |++++.+.-.
T Consensus 176 i~eAq~~AA~~fg---------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLs-Ga~PVYl~P~ 245 (720)
T PRK13578 176 AKDAQKHAAKVFN---------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQA-GATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHhC---------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHc-CCeEEEeecc
Confidence 4566666777665 345688999999999999999999999999999999998885 6666 9999998754
Q ss_pred CCCCcc----cCH-----HHHHHHHHHH-Hh--cC-CceeEEEEecCCCCCCCCCCHHHHHHHHHH-HHhcCeEEEEecc
Q 043923 167 SLNGFQ----ITE-----TAIEEAYQLA-QK--RH-LKVKGVLVTNPSNPLGTTMSRNELNLLVNI-ITEKNIHLISDEI 232 (469)
Q Consensus 167 ~~~~~~----~d~-----~~l~~~i~~~-~~--~~-~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~-~~~~~~~iI~Dea 232 (469)
. +.|. ++. +.++++|.+. +. .. ...+++++++|+. .|.+++.++ |+++ ++.++ .|++|||
T Consensus 246 ~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~---I~~~~~h~~~-~llvDEA 319 (720)
T PRK13578 246 R-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQ---VVDKIGHLCD-YILFDSA 319 (720)
T ss_pred c-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHH---HHHHhhccCC-cEEEeCc
Confidence 3 2233 344 4488887654 11 01 1258999998876 899998555 7776 56777 9999999
Q ss_pred ccccc-cCCC--Cccch-hhhhhccccccCCcCCeEEEEccCccccCCCcceEE-EEEe
Q 043923 233 YSGTV-FSSP--GFVSI-MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG-AIYS 286 (469)
Q Consensus 233 y~~~~-~~~~--~~~s~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG-~li~ 286 (469)
|..+. |... .++.+ .++- +| .+.++++.|.+|.+ +++--+ +|..
T Consensus 320 hgah~~F~p~~~~~p~~al~~G-------aD-~p~i~v~QStHKtL--~alTQaS~LHv 368 (720)
T PRK13578 320 WVGYEQFIPMMADCSPLLLELN-------EN-DPGIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred chhhhccCcccccCChhhhhcC-------CC-CCCeEEEEChhhcc--hhhhhHhhhhc
Confidence 97652 3221 11111 1221 12 34578899999998 454444 4444
No 339
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=2.6e-11 Score=124.52 Aligned_cols=308 Identities=15% Similarity=0.109 Sum_probs=171.8
Q ss_pred HHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCC----
Q 043923 91 FKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGV---- 158 (469)
Q Consensus 91 Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~---- 158 (469)
....+|+.+.+... ...+.+++++++++|+..+++.... + ...|+....+|++....+....|.
T Consensus 100 ~~~~lae~L~~~~p----~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 100 PSILLAEKLIEVVP----EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred HHHHHHHHHHHhCC----CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 33455555543321 1236899999999999999887532 3 367888888887754332221121
Q ss_pred --------EEEEeeccCCC--Ccc--------cCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCC-CCHHHHHHHHH
Q 043923 159 --------EIVPIQCTSLN--GFQ--------ITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTT-MSRNELNLLVN 218 (469)
Q Consensus 159 --------~~~~v~~~~~~--~~~--------~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~-~s~e~l~~l~~ 218 (469)
.+..+|..... .+. -+++.+++.++. .+.++.+|++.- ...-.|.. .+.+-+++|.+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~ 252 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRN 252 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHH
Confidence 12222221000 011 123455555542 223677766663 25556764 68999999999
Q ss_pred HHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH
Q 043923 219 IITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 219 ~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~ 297 (469)
+|++||+++|.||++.++.-.+.. .. .+... ..+.++ +++|.+| .| +.+|.+++.++ +.+.+..
T Consensus 253 lc~~~g~llI~DEV~TG~GRtG~~-~a-~~~~g--------v~PDiv---~~gK~l~-gG~~Pi~av~~~~e-i~~~~~~ 317 (460)
T PRK06916 253 LCTKYNVLFITDEVATGFGRTGKM-FA-CEHEN--------VTPDIM---TAGKGLT-GGYLPIAITVTTDE-IYNAFYG 317 (460)
T ss_pred HHHHcCCEEEeechhhCCCcCchh-hH-HHhcC--------CCCCee---eeehhhh-cCccccceeeecHH-HHHHhhc
Confidence 999999999999999874212221 11 11111 223333 6799998 88 59999999544 4443321
Q ss_pred --------hcc-cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---CCceecCCceEEEEEecc
Q 043923 298 --------MSS-FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---GISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 298 --------~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g~~v~~~~~g~~~~v~~~ 365 (469)
... ....++++..++.+.|+...- +...+..++.-+++.+.|+++ ..-.....-|+++-+.+.
T Consensus 318 ~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-----~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~ 392 (460)
T PRK06916 318 DYEEQKTFFHGHSYTGNPLGCAVALANLELYEK-----TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELV 392 (460)
T ss_pred cccccCccccCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEee
Confidence 111 112466666666665542210 112233344444455555443 211112223566667664
Q ss_pred cccccC-C----hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 366 HLLRSN-T----FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 366 ~~~~~~-~----~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
...... . ......++..++ ++||++.|.. +.+|+..+. ++++++++++++|.+++++..+
T Consensus 393 ~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 393 KNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPLG-------NTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred cccccccCCCchhhHHHHHHHHHH-HCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 321110 0 011124445544 6799998631 368888665 5999999999999999986543
No 340
>PRK06148 hypothetical protein; Provisional
Probab=99.53 E-value=1.2e-11 Score=137.87 Aligned_cols=352 Identities=11% Similarity=0.060 Sum_probs=192.7
Q ss_pred CCCCeeeeeccccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 36 NPTGIIQMGLAENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
....+||+..+...+. .+.+.+++++..+. ......|. .+....+|+.+..... -..+.
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~----------l~~~~~~~-----~~~~~~lAe~L~~~~p----~~~~~ 682 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAAR----------LNTNTRYL-----HDAIVAYAERLTATLP----DGLTV 682 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhh----------cCCcCCcC-----CHHHHHHHHHHHHhCC----CCcCE
Confidence 3456889877765554 46677776663211 11111222 2344455555543321 12367
Q ss_pred EEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC--------------CEEEEeeccCCCCccc-C--
Q 043923 114 IVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG--------------VEIVPIQCTSLNGFQI-T-- 174 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g--------------~~~~~v~~~~~~~~~~-d-- 174 (469)
++++++++||+..+++... .....|+....+|++....+....+ ...++.|......|.. +
T Consensus 683 v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 762 (1013)
T PRK06148 683 AFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAE 762 (1013)
T ss_pred EEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhh
Confidence 9999999999999988753 2345788888888776432211101 1111111000011211 1
Q ss_pred -----HHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 175 -----ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 175 -----~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
.+.+++.++.....+.++.+||+..-..-.|. ..+.+-++++.++|++||+++|.||+..++.-.+...... +
T Consensus 763 ~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~-e 841 (1013)
T PRK06148 763 HGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAF-E 841 (1013)
T ss_pred hHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhh-h
Confidence 13455555432222335666555533333454 5688899999999999999999999998742222211111 1
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh----cccccCcHHHHHHHHHHhcCchhhHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM----SSFGLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
... ..+.++ +++|.+| .|+.+|.+++. +.+.+.+... .+++ .++++..++.+.|+-..-
T Consensus 842 ~~g--------v~PDiv---t~gK~lg-gG~Plgav~~~-~ei~~~~~~g~~~~~Tf~-gnpla~aaa~a~L~~i~~--- 904 (1013)
T PRK06148 842 TQG--------VVPDIV---TMGKPIG-NGHPMGAVVTT-REIADSFDNGMEYFNTFG-GNPVSCAIGLAVLDIIED--- 904 (1013)
T ss_pred hcC--------CCccee---eeccccc-CCcceEEEEEc-HHHHhhccCCCccccCCC-CCHHHHHHHHHHHHHHhh---
Confidence 111 223333 6799998 89999999994 5555544321 2222 566666666665542210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEecccccccC--ChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRHLLRSN--TFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~~~~~~--~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
+...+..++.-++|.+.|++ +++......-|+++.+.+....... .......++..++ ++||.+.+...
T Consensus 905 --e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~-- 979 (1013)
T PRK06148 905 --EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP-- 979 (1013)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC--
Confidence 11222233333444444433 3332222233578778775321111 1112234455554 67999986422
Q ss_pred CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 399 CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 399 ~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
..+.+|+.... ++++++++++++|.+++.+.
T Consensus 980 --~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 980 --HDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred --CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 14679998876 49999999999999999754
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.53 E-value=1.5e-11 Score=126.28 Aligned_cols=354 Identities=10% Similarity=0.026 Sum_probs=189.2
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ ...+. .|.+.+++++.... ......+.. ...+.+..+|+.+.+... -..
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~~~--~~~~~~~~lae~L~~~~p----~~~ 112 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARR----------LPYYTPFGD--MTNAPAAELAAKLAELAP----GDL 112 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHh----------Ccccccccc--cCCHHHHHHHHHHHHhCC----CCc
Confidence 34457888665 23343 46666666653111 000111110 113445666666654322 124
Q ss_pred CcEEEeCChHHHHHHHHHHhc------C-C-CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCC--C
Q 043923 112 SKIVLTAGATSANETLMFCLA------E-P-GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSL--N 169 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~------~-~-gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~--~ 169 (469)
+.+++++++++|+..+++... . + ..+|+...-+|++....+....|. .+..+|.... .
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 689999999999999988742 1 2 257888888887754332211121 1222222110 0
Q ss_pred CcccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 170 GFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 170 ~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
.+..+ ++.+++.+.. ....++.+|++.......|. ..+.+-+++|.++|++||+++|.||+..++.-.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 270 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG 270 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc
Confidence 01111 1233333321 11235666666543555566 4578889999999999999999999998742112
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--------c-ccccCcHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--------S-SFGLVSSQTQY 310 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--------~-~~~~~s~~~q~ 310 (469)
.- ........ ..+.++ +++|.+| .| +.+|.+++++ .+.+.+... . ..+..++++..
T Consensus 271 ~~-~~~~~~~g--------v~PDiv---t~gK~l~-gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~~~~T~~gnpl~~a 336 (466)
T PRK07036 271 HF-FASEAVFG--------IQPDII---TFAKGLT-SGYQPLGAVIISE-RLLDVISGPNAKGNVFTHGFTYSGHPVACA 336 (466)
T ss_pred hh-hhhhhhcC--------CCCCEE---EEccccc-cCccccEEEEEcH-HHHHHHhcccCcCcccccCCCCCCCHHHHH
Confidence 11 11110111 123333 6799998 88 5999999954 444444311 1 11224666666
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh---cCCceecCCceEEEEEecccccccC-C----hhHHHHHHHH
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK---AGISCLKSNAGLFCWVDMRHLLRSN-T----FEAEMELWKK 382 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~g~~v~~~~~g~~~~v~~~~~~~~~-~----~~~~~~l~~~ 382 (469)
++.+.|+...- ....+..++.-++|.+.|++ +++......-|.++.+.+....... . ......+...
T Consensus 337 aa~a~Le~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~ 411 (466)
T PRK07036 337 AALKNIEIMER-----EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRH 411 (466)
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHH
Confidence 66665542210 11222233333334444433 3332222234577778774321111 0 0112234444
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
+ .++||.+.+.. +.+|++... ++++++++++++|.+++++..+.
T Consensus 412 ~-~~~Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~ 456 (466)
T PRK07036 412 C-QERGLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEETADE 456 (466)
T ss_pred H-HHCCcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 46799997631 358888765 49999999999999999877553
No 342
>PRK07480 putative aminotransferase; Validated
Probab=99.53 E-value=8.7e-12 Score=127.73 Aligned_cols=311 Identities=14% Similarity=0.122 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCCE--
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGVE-- 159 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~~-- 159 (469)
+.+..+|+.+.+... ...+.+++++++++|+..+++.... +| .+|+...-+|++.........|..
T Consensus 94 ~~~~~lae~L~~~~p----~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 94 PPAIELAAKLAEVAP----PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 445556666554322 2346899999999999999876521 23 468887877777532221111211
Q ss_pred ----------EEEeeccC--CCCcccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHH
Q 043923 160 ----------IVPIQCTS--LNGFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVN 218 (469)
Q Consensus 160 ----------~~~v~~~~--~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~ 218 (469)
+..++.+. ...+..+ .+.+++.+.+ ....++.+|++.....-.|.. .+.+-+++|.+
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~ 247 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQR 247 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 11121110 0000011 1344433321 112366666665334445664 57778999999
Q ss_pred HHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHH-
Q 043923 219 IITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAAT- 296 (469)
Q Consensus 219 ~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~- 296 (469)
+|++||+++|.||++.++.-.+..+ . .+... ..+.++ +++|.+| .|+ .+|.+++.+ .+.+.+.
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG~~~-a-~~~~g--------v~PDiv---~~gK~l~-gG~~Pi~av~~~~-~i~~~~~~ 312 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTGEWF-G-SQHFG--------IKPDLM---TIAKGLT-SGYIPMGAVGVGD-RVAEVLIE 312 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCcchh-h-hhhcC--------CCCCee---eeehhhc-cCCccceEEEEcH-HHHHHHhc
Confidence 9999999999999998742122211 1 11111 223333 6799998 784 899999954 4544442
Q ss_pred H---h--cccccCcHHHHHHHHHHhcC---chhhHHHH-HHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccc
Q 043923 297 K---M--SSFGLVSSQTQYLLSALLSD---KKFTQNYI-SENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL 367 (469)
Q Consensus 297 ~---~--~~~~~~s~~~q~~~~~~l~~---~~~~~~~~-~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~ 367 (469)
. . ...+..++++..++.+.|+- .+. .+.. +.+-+++. +.|.+ +.++++......-|+++.+.+...
T Consensus 313 ~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l-~~~~~~~~g~~l~---~~l~~-l~~~~~i~~vrG~Glm~gie~~~~ 387 (456)
T PRK07480 313 EGGEFNHGFTYSGHPVAAAVALANLRILRDEGI-VERVRDDTGPYLQ---KRLRE-LADHPLVGEVRGVGLVGAIELVKD 387 (456)
T ss_pred CCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHH---HHHHH-hhcCCCeeeEEeecceEEEEEecc
Confidence 1 1 11123567777776666643 222 1222 12222222 22222 333343211222357777777421
Q ss_pred ccc-CCh---hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 368 LRS-NTF---EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 368 ~~~-~~~---~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
... ... ......+...+.++||.+.+. .+.+|++... ++++++++++++|.+++++..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 388 KATRERFEAGGGVGTICRDHCFANGLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred ccccccCcchhhHHHHHHHHHHHCCcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 110 000 011122333344679999752 1469999886 4999999999999999987655
No 343
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=2.8e-11 Score=124.21 Aligned_cols=307 Identities=16% Similarity=0.097 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc------C-C-CCEEEEccCCCcChHHHHhhhCCC---
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA------E-P-GEAFLLPTPYYPGFDRDLKWRTGV--- 158 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~------~-~-gd~Vl~~~P~y~~~~~~~~~~~g~--- 158 (469)
+.+..+|+.+.+... ...+.+++++++++|.+.+++... . + ..+|+...-+|++....+....|.
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 90 EPVIELSERLVKITP----PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 444556666554321 134689999999999999988752 1 2 357888888887764332221121
Q ss_pred ---------EEEEeeccCCC--Cccc--------CHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCC-CCCHHHHHHHH
Q 043923 159 ---------EIVPIQCTSLN--GFQI--------TETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGT-TMSRNELNLLV 217 (469)
Q Consensus 159 ---------~~~~v~~~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~-~~s~e~l~~l~ 217 (469)
.+..+|..... .+.. +++.+++.+.. ...++.+|++.- ...-.|. ..+.+-+++|.
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 12223221100 0011 23445555542 233677766653 2444565 56778999999
Q ss_pred HHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHH
Q 043923 218 NIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAAT 296 (469)
Q Consensus 218 ~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~ 296 (469)
++|++||+++|.||+..++.-.+.-+ . .+... ..+.++ +++|.+| .| +.+|.+++++ .+.+.+.
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~~~-a-~~~~g--------v~PDiv---~~gKgl~-gG~~Pi~av~~~~-ei~~~~~ 307 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGTMF-A-CEQAG--------IRPDFL---CLSKALT-GGYLPLAAVLTTD-TVYQAFY 307 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCccccch-H-HHhcC--------CCCCEE---eeehhcc-CCcccceEEEecH-HHHHHHh
Confidence 99999999999999998742222211 1 11111 223444 5689998 89 5999999954 4444432
Q ss_pred H--------h-cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---CCceecCCceEEEEEec
Q 043923 297 K--------M-SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---GISCLKSNAGLFCWVDM 364 (469)
Q Consensus 297 ~--------~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g~~v~~~~~g~~~~v~~ 364 (469)
. . ...+..++++..++.+.|+-..- +...++.++.-++|.+.|+++ ..-.....-|+++.+.+
T Consensus 308 ~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~-----~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~ 382 (466)
T PRK07030 308 DDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ-----DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEM 382 (466)
T ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEe
Confidence 1 1 11122466776666666543211 111222233333444444332 22111123457777877
Q ss_pred ccccccC-----ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 365 RHLLRSN-----TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 365 ~~~~~~~-----~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
....... .......+...++ ++||.+.+. .+.+|+.... ++++++++++++|.+++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 383 VQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccCccccccCcchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 4311100 0011124455554 679999763 1368998765 59999999999999999887
No 344
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.52 E-value=9.1e-12 Score=126.79 Aligned_cols=281 Identities=19% Similarity=0.141 Sum_probs=162.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEEccCCCcChHHHHhhhCCCE-------------EEEeeccCCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-------P-GEAFLLPTPYYPGFDRDLKWRTGVE-------------IVPIQCTSLN 169 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-------~-gd~Vl~~~P~y~~~~~~~~~~~g~~-------------~~~v~~~~~~ 169 (469)
-+.+++++++++|+..++..... + ...|+...-+|.+....+....+.. +..++... .
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~ 183 (427)
T TIGR00508 105 LDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ-N 183 (427)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC-c
Confidence 36899999999999988876431 2 2578888888877543322111211 11111110 1
Q ss_pred Ccc-----cCHHHHHHHHHHHHhcCCceeEEEEecC--CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 170 GFQ-----ITETAIEEAYQLAQKRHLKVKGVLVTNP--SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 170 ~~~-----~d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.+. -|++++++.+... ..++.+|++. | +.-.|. ..+.+.+++|.++|++||+++|+||++.++...+.
T Consensus 184 ~~~~~~~~~~~~~l~~~l~~~---~~~vaavivE-Pv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~ 259 (427)
T TIGR00508 184 RFDEEWNEEAITPLAKLMELH---SDEIAAVILE-PIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK 259 (427)
T ss_pred cccchhHHHHHHHHHHHHHhc---CCcEEEEEEe-chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 111 1345666666431 2356555555 5 454555 55899999999999999999999999976422232
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHh-------cccccCcHHHHHHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKM-------SSFGLVSSQTQYLLS 313 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~-------~~~~~~s~~~q~~~~ 313 (469)
.+.. +... ..+. ++ +++|+++ .|+ .++.+++. +.+.+.+... ...+..++++..++.
T Consensus 260 ~~~~--~~~~--------v~pD-i~--~~gK~l~-gG~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~ 324 (427)
T TIGR00508 260 LFAC--EHAG--------VVPD-IL--CVGKALT-GGYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLACAVAE 324 (427)
T ss_pred cchh--hhcC--------CCCC-EE--Eechhhh-cCcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHH
Confidence 2111 1111 1122 33 4799997 885 77888874 4454444321 111124566666666
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ceecC--CceEEEEEecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI-SCLKS--NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~~~--~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
+.|+... + ....++++++-++|.+.|++++. ..... .-|.++.+.+... .....+...++ ++||.
T Consensus 325 a~l~~l~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l~-~~Gv~ 392 (427)
T TIGR00508 325 ASLAILL---E--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP------VNVEELQKKFV-EQGVW 392 (427)
T ss_pred HHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc------cCHHHHHHHHH-HCCeE
Confidence 6654211 0 11234455555666666665532 11111 1256666776421 11224555555 66999
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 391 ISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+.+.. ..+|++... ++++++++++++|++++.+
T Consensus 393 ~~~~~-------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 393 IRPFG-------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 97532 368998875 4999999999999999865
No 345
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=7.8e-11 Score=120.83 Aligned_cols=356 Identities=12% Similarity=0.034 Sum_probs=188.0
Q ss_pred CCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-
Q 043923 37 PTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT- 111 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~- 111 (469)
...+||+..+ ...+ ..|.+.+++++.... ....+... -..+.+..+|+.+.+.... ...
T Consensus 57 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~------------~~~~~~~~-~~~~~~~~lAe~L~~~~p~---~~~~ 120 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTS------------GLPLHTLD-LTTPLKDAFSEYLLSLLPG---QGKE 120 (459)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhh------------hccccccc-cCCHHHHHHHHHHHHhCCC---cccc
Confidence 3457888766 3333 346666666653110 00001100 1235556667666543210 011
Q ss_pred -CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCC--Ccc--
Q 043923 112 -SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLN--GFQ-- 172 (469)
Q Consensus 112 -~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~--~~~-- 172 (469)
..+++++++++|+..+++... ...+.|+...-.|++....+....|. .+..+|.+... .|.
T Consensus 121 ~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK06931 121 YCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIG 200 (459)
T ss_pred ceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 134566899999999888742 23467888888887765443311111 12223322100 011
Q ss_pred --cCHHHHHHHHHHHHh----cCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 173 --ITETAIEEAYQLAQK----RHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 173 --~d~~~l~~~i~~~~~----~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
-+.+.++..+++... ...++.+||+.--..-.|. ..+.+-++++.++|++||+++|.||+..++.-.+.. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a 279 (459)
T PRK06931 201 GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FA 279 (459)
T ss_pred chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HH
Confidence 123333333332211 1234666555432444465 467889999999999999999999999874222211 11
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhc---Cch
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLS---DKK 320 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~---~~~ 320 (469)
.+.. +..+.++ +++|.+| .|+.+|.+++. +.+ +.+... ...+..++++..++.+.|+ +.+
T Consensus 280 -~~~~--------gv~PDiv---t~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~ 344 (459)
T PRK06931 280 -FEHA--------GIEPDII---VMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEEN 344 (459)
T ss_pred -hhhc--------CCCCCEE---Eeccccc-CCcceeeeeeH-HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 1111 1223344 5799998 89999988874 333 333211 1112256677666666654 222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc------C--ChhHHHHHHHHHHHhCCeEEe
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS------N--TFEAEMELWKKIVYDVKLNIS 392 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~------~--~~~~~~~l~~~ll~~~GI~v~ 392 (469)
. .++.++.-+++.+. |.+..+++++......-|+++.+.+...... . .......+...++ ++||.+.
T Consensus 345 l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~ 419 (459)
T PRK06931 345 L-AQNAAERGEWLKAQ---LAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLE 419 (459)
T ss_pred H-HHHHHHHHHHHHHH---HHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEe
Confidence 2 22333333333222 3332233443222223467777777432110 0 1111223444444 6799998
Q ss_pred CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 393 PGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 393 pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++... .+.+|+..+. ++++++++++++|.+++++.-|
T Consensus 420 ~~~~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 420 RGGRN----GNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred ecCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 65321 3579988876 4999999999999999987544
No 346
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.50 E-value=5.6e-12 Score=127.99 Aligned_cols=251 Identities=16% Similarity=0.160 Sum_probs=174.9
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C---C------CEEEEccCCCcChHHHH
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-----P---G------EAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----~---g------d~Vl~~~P~y~~~~~~~ 152 (469)
+..++.+.+..++.+-++.. ..-.=.+|+|+|+++..++.+... . + ..|+++.-.|.++..++
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 56899999999999887732 334567999999999987766421 1 1 16899999999999999
Q ss_pred hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee--EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK--GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~--~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
... |++...++.+.. ++.+|++++++++++. +. +|+.+-++-+||.+=+ +++|.++|+++++++++|
T Consensus 175 ~~l-G~~~~~v~~~~~-~~~id~~~l~~~i~~~------t~~g~vV~~aGtT~~G~iDd---i~~ia~ia~~~~i~lHVD 243 (460)
T COG0076 175 RYL-GLGLRRVPTVPT-DYRIDVDALEEAIDEN------TIGGVVVGTAGTTDTGSIDD---IEELADIAEEYGIWLHVD 243 (460)
T ss_pred HHh-CCCceeEEeccC-ccccCHHHHHHHHHhh------ccCceEEEEecCCCCCccCC---HHHHHHHHHHcCCcEEEE
Confidence 988 999999998864 7899999999999873 32 3677777889998855 666899999999999999
Q ss_pred ccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH-HHHHHHHHhccccc------
Q 043923 231 EIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD-MVVAAATKMSSFGL------ 303 (469)
Q Consensus 231 eay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~-~~~~~~~~~~~~~~------ 303 (469)
.||++++..-......... +.....-+.-+++|.. +.-..+||++..++ .+.........++.
T Consensus 244 AA~GG~~~pf~~~~~~~~f---------~l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~ 313 (460)
T COG0076 244 AAFGGFLLPFLEPDGRWDF---------GLEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPN 313 (460)
T ss_pred ccccceeecccCccchhhc---------CCCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCCcCc
Confidence 9999875321111111111 0223344456999965 58899999999877 45444332111111
Q ss_pred ----Cc-----HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCCceEEEEEeccc
Q 043923 304 ----VS-----SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRH 366 (469)
Q Consensus 304 ----~s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~ 366 (469)
.+ .+.+++....+. .+-..+..++..+..+++.+.|++.+ +++..+...+.+.+++++
T Consensus 314 ~ti~~sr~~~~~~~~~~~l~~lG-----~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 314 FTILGSRPGRQALALYANLRRLG-----REGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred eeEeeccchHHHHHHHHHHHHhC-----HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 11 122333333332 23346667777788899999999986 887765566788888864
No 347
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.49 E-value=4.5e-12 Score=133.18 Aligned_cols=170 Identities=14% Similarity=0.128 Sum_probs=118.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (469)
+.+..+.+|+.++ .....+++||+|.++.+++.+++.+||.|+++..+|-+..+++.+. |+.++.++...
T Consensus 197 i~eAe~~AA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLils-ga~PVYl~P~r 266 (714)
T PRK15400 197 HKEAEEYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMS-DVTPIYFRPTR 266 (714)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 4566666777665 3456789999999999999999999999999999999999888877 99999987543
Q ss_pred CCCcc----cC-----HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-
Q 043923 168 LNGFQ----IT-----ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV- 237 (469)
Q Consensus 168 ~~~~~----~d-----~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~- 237 (469)
+.|. ++ .+.++++|.+.+. ..++..+++++|+. .|.+++.++ |++.|+.++ |++||||..+.
T Consensus 267 -n~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~pTY-dG~~yd~~~---I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 267 -NAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNSTY-DGLLYNTDF---IKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECCCC-ccEecCHHH---HHHHhCCCC--EEEEccchhhhc
Confidence 2332 24 7888888875331 12334789998854 899998655 677777776 78999998652
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEE
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGA 283 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~ 283 (469)
|... +.....+.. +++..+.++++.|.+|.+ +|+.-+.
T Consensus 339 F~p~-~~~~sam~~-----ga~~~~~i~vtQStHKtL--~alTQaS 376 (714)
T PRK15400 339 FSPI-YEGKCGMSG-----GRVEGKVIYETQSTHKLL--AAFSQAS 376 (714)
T ss_pred cCcc-cCCcChhhc-----CCCCCCceEEEEchhhcc--cchhHHh
Confidence 3221 111111111 011225568899999997 4544443
No 348
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.49 E-value=2e-11 Score=130.82 Aligned_cols=320 Identities=14% Similarity=0.164 Sum_probs=191.2
Q ss_pred ccccccCCC---CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----C---C-CCEEEEccCC
Q 043923 76 FRELALFQD---YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----E---P-GEAFLLPTPY 144 (469)
Q Consensus 76 ~~~~~~Y~~---~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~---~-gd~Vl~~~P~ 144 (469)
+...+-|.| .+|+.++...+..++.+..|. +.-.+... ++.++..+.+.++. . + .++|+++.-.
T Consensus 526 F~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl~p~-sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~sa 600 (954)
T PRK12566 526 FAQLHPFAPREQAEGYRAMIDELEAWLCAITGF----DAICMQPN-SGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSA 600 (954)
T ss_pred hhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEeecCC-chHHHHHHHHHHHHHHHHhcCCCCCCEEEecccc
Confidence 344455777 689999999999888887762 22233333 44444444444432 2 2 3577888877
Q ss_pred CcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 145 YPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 145 y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
|......+... |++++.+++++++ .+|+++|++.+++. ..++.+|.+++|++-++. .+++++|+++|+++|
T Consensus 601 HgtNpasa~~~-GieVv~Vp~D~~G--~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~G 671 (954)
T PRK12566 601 HGTNPASAQMA-GMRVVIVECDPDG--NVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHG 671 (954)
T ss_pred cccCHHHHHHC-CCEEEEeccCCCC--CcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcC
Confidence 75545556666 9999999998533 69999999998732 237788888888864433 356888999999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC----CcceEEEEEecCHHHHHHHHHhc-
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL----PGFRVGAIYSNDDMVVAAATKMS- 299 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~----~GlRiG~li~~~~~~~~~~~~~~- 299 (469)
+++++|.++.. ......... ..+..++.++++|+|+. .|.-+|.+.+. +.+...+....
T Consensus 672 alv~vDgA~~~---a~~~l~~Pg------------~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~-~~L~pfLp~~P~ 735 (954)
T PRK12566 672 GQVYMDGANLN---AQVGLARPA------------DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR-AHLAPFVANHPV 735 (954)
T ss_pred CEEEEEeeChh---hccCCCChh------------hcCCCEEEecCCcccCcCccCCCCccchhhhh-hhhhhhccCCCC
Confidence 99999999852 111111112 23667888999999852 24445554442 22222222110
Q ss_pred ----c----cccC------cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEE--EEE
Q 043923 300 ----S----FGLV------SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLF--CWV 362 (469)
Q Consensus 300 ----~----~~~~------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~--~~v 362 (469)
. .+.. +.....++..++.... .+ +.+....-..+..++.+.|.+. ++.+.++.+-+| ..+
T Consensus 736 ~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG--~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii 812 (954)
T PRK12566 736 VPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMG--PQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECIL 812 (954)
T ss_pred cCCCCCCCCCCceeecccchHHHHHHHHHHHHHHC--HH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEE
Confidence 0 0111 1111222333333322 22 4444444455667888888763 444432222222 123
Q ss_pred ecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 363 DMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++........ .+..++.++|+ ++||..-- ..|. ..+.+||+... .++++|++++++|+.+.++.++
T Consensus 813 ~~~~l~~~~g-~~~~dvakRL~-d~Gihapt-~~fP--v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 813 DLRPLKAQTG-ISEEDVAKRLM-DYGFHAPT-MSFP--VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred EccccccccC-CCHHHHHHHHH-HCCcEEeE-Eeec--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 3332211111 22345778877 78997643 3342 37789999976 3899999999999999888554
No 349
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=1e-12 Score=126.78 Aligned_cols=306 Identities=14% Similarity=0.132 Sum_probs=198.3
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
.-+.++.+.+|+|++ .++.+++..| -......+.+|+.+|--|+...-.+..+...++.. |+.+.-+..
T Consensus 182 ~~hkelE~l~A~f~g---------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLS-gAtiRVfkH 250 (519)
T KOG1357|consen 182 EEHKELEELVARFLG---------VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLS-GATTRVFRH 250 (519)
T ss_pred HHHHHHHHHHHHhcC---------CcceEEEecc-ccccccCcceeecCCcceeeccccchheecccccc-CceEEEEec
Confidence 345788888888886 5778888888 33445566788899999999998998888888877 999888876
Q ss_pred cCCCCcccCHHHHHHHHHHHHhc-CCc----eeEEEE--ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKR-HLK----VKGVLV--TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~-~~~----~~~vvl--~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+ |...||+.|++.-.. +|+ -+-+++ ..-...-|.+.. +.+++.++++|..+++.||+++-...
T Consensus 251 N-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 251 N-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred C-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeecccccccc
Confidence 5 567788888764221 111 122222 222345555554 66689999999999999999985433
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc---cc--cCcHHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS---FG--LVSSQTQYLLS 313 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~---~~--~~s~~~q~~~~ 313 (469)
+.. .....++.. .|..+..|.+++|+|+||.+| ||+.+ ++.+.+.++.... +. .+++++|....
T Consensus 321 g~t-Grgvce~~g------~d~~dvDImMGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~s 389 (519)
T KOG1357|consen 321 GAT-GRGVCEYFG------VDPEDVDIMMGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQILT 389 (519)
T ss_pred CCC-CcceeeccC------CCchhheeecceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHHH
Confidence 221 122222211 235577888999999999888 88888 5555555544322 11 13344554433
Q ss_pred HH--hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEe--cccccccCChhHHHHHHHHHHHhCCe
Q 043923 314 AL--LSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVD--MRHLLRSNTFEAEMELWKKIVYDVKL 389 (469)
Q Consensus 314 ~~--l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~--~~~~~~~~~~~~~~~l~~~ll~~~GI 389 (469)
.+ +...+- .+..++..++++++..+++..|.+.|+-+...+....+-+- .+... ..+-+.++++ +|
T Consensus 390 sl~~i~G~dg-t~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~--------~~f~r~~l~~-ni 459 (519)
T KOG1357|consen 390 SVKHIMGEDG-TNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKI--------VAFSREMLER-NI 459 (519)
T ss_pred HHHhhcCCCc-ccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccc--------cHHHHHHHhc-Cc
Confidence 32 222222 45567888899999999999999999988877665433222 22111 1344556644 66
Q ss_pred EEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 390 NISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 390 ~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+.-+.+.. +.-.+.+|+|.+. ++.|+++.+++.+.+.=+....
T Consensus 460 gvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~ 505 (519)
T KOG1357|consen 460 GVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDEDGV 505 (519)
T ss_pred eEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchhhcc
Confidence 555333222 2235678999977 5899999999998877544433
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.47 E-value=3.9e-11 Score=129.42 Aligned_cols=311 Identities=15% Similarity=0.146 Sum_probs=186.5
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCC
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g 157 (469)
+|+.++...+..++.+..| .+.-. +..+|+.++-...+.++. ...++|+++.-.|......+... |
T Consensus 526 qG~lq~i~elq~~l~eltG----md~~S-l~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~-G 599 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITG----FDAIS-LQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA-G 599 (939)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCcc-cCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC-C
Confidence 4677888888888888776 33323 334455554443333332 12357889998887777777777 9
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
++++.++++. +..+|+++|++.+++ .+.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|.++....
T Consensus 600 ~~Vv~V~~d~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 600 MQVVPVNCDQ--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CEEEEeccCC--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhC
Confidence 9999999874 346899999999974 123889999999999 788754 26668999999999999999985311
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccC----CCcceEEEEEecCHHHHHHHHH--h----------ccc
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG----LPGFRVGAIYSNDDMVVAAATK--M----------SSF 301 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~GlRiG~li~~~~~~~~~~~~--~----------~~~ 301 (469)
. ...... ..+-.+++.|.+|+|+ ..|-.+|++.+.+. +...+.. + +..
T Consensus 672 ~---~l~~Pg------------~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~-L~~~lPg~~v~~t~d~~greq~I 735 (939)
T TIGR00461 672 V---GLTSPG------------DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH-LIPFLPKHDVVSMITGIGGSKSI 735 (939)
T ss_pred C---CCCCcc------------ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh-chhhcCCCcccccccCCCCcccc
Confidence 1 111111 3356788889999775 35667899988533 2221110 0 000
Q ss_pred ccC-----cH-HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC-CceE-E--EEEecccccccC
Q 043923 302 GLV-----SS-QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS-NAGL-F--CWVDMRHLLRSN 371 (469)
Q Consensus 302 ~~~-----s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~-~~g~-~--~~v~~~~~~~~~ 371 (469)
+.+ ++ .....+..+++.. ..+-+++..+.--.+..++.+.|.+ +.++.-+ ..+. | +.++++......
T Consensus 736 ga~s~~~~g~a~~~l~a~~yi~~l--G~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~ 812 (939)
T TIGR00461 736 GSVSAAPYGSASILPISWMYIKMM--GNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKT 812 (939)
T ss_pred ccccccccCcHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhc
Confidence 101 11 1111111122211 1233455555555577888888877 4454332 2222 1 335555321111
Q ss_pred ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 372 TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 372 ~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. ....++.++|+ ++|+..-. ..|...+.-.++.+-+ .++++||++++++.++-++.++
T Consensus 813 g-~~~~dIakrL~-d~G~hapt-~~~pv~g~lmiepTE~-eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 813 G-IEAIDVAKRLQ-DYGFHAPT-LSFPVPGTLMVEPTES-ESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred C-CCHHHHHHHHH-hCCeeccc-cCCccCCeEEEEeecc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 1 22346777776 66997543 3343222224555554 3899999999999888776665
No 351
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.46 E-value=4.3e-11 Score=118.74 Aligned_cols=293 Identities=14% Similarity=0.070 Sum_probs=180.3
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCcCh-H-HHHhhhCCC-EEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-EPGEAFLLPTPYYPGF-D-RDLKWRTGV-EIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~-~-~~~~~~~g~-~~~~v 163 (469)
..++.+.+.+.+++.++ .+.+.+-++++.|+|.++++++..++ ++|+.|++.. .|+.- . .+++.. |+ ++..+
T Consensus 37 F~~i~~e~~~~L~~l~~--~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~-g~~~v~~l 112 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLG--VPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQL-KLPDVRVL 112 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhc-CCCCcEEE
Confidence 45666666666666655 11122346779999999999999998 5898888764 55543 3 455555 88 46666
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
..+ .+-.+++++++. + +.|++++....||...+.++ ++..+ ++.++|+|.+-+ +++.+.
T Consensus 113 ~~~--~g~~~~~~~ve~----------~-~~v~~vhnETSTGv~npv~~---i~~~~--~~~lliVDavSs---~g~~~l 171 (374)
T TIGR01365 113 EAE--YGKLPDLKKVDF----------K-NDVVFTWNGTTSGVRVPNGD---FIPAD--REGLTICDATSA---AFAQDL 171 (374)
T ss_pred cCC--CCCCCCHHHcCC----------C-CCEEEecCCCchheeccccc---ccccc--CCCcEEEEccch---hcCCCC
Confidence 544 233567888762 1 12567766678999998643 33211 489999999987 666542
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHH--------H----------------hc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT--------K----------------MS 299 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~--------~----------------~~ 299 (469)
.+- +..+++.|.-|.+++|+ .+++++.+++.+..... . .+
T Consensus 172 -~~d--------------~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
T TIGR01365 172 -DYH--------------KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGS 235 (374)
T ss_pred -Chh--------------HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCC
Confidence 211 24577889999998665 57778776665533211 0 01
Q ss_pred ccccCcHHHHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhcC-CceecC----CceEEEEEecccc-cc--
Q 043923 300 SFGLVSSQTQYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKAG-ISCLKS----NAGLFCWVDMRHL-LR-- 369 (469)
Q Consensus 300 ~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~----~~g~~~~v~~~~~-~~-- 369 (469)
.+.+++....+++..+|. ++.+ -++.+.++++++.+.+++.++++| +..... .+...+.+.++.. .+
T Consensus 236 t~~TP~v~~l~a~~~~l~---~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~ 312 (374)
T TIGR01365 236 TINTPSMLCVEDWLDALK---WAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDAL 312 (374)
T ss_pred CCCChHHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcccccc
Confidence 112222333333334332 1122 268888899999999999999998 665542 2322344555432 11
Q ss_pred c-C-ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ecCCHHHHHHHHHHHHHH
Q 043923 370 S-N-TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-ANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 370 ~-~-~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~~~~e~i~~~l~~L~~~ 427 (469)
. + ......+ +...++++||.+.+|..- ..+..+||+. +.+++++++.+++.|.=+
T Consensus 313 ~~~~~~~~~~~-~~~~l~~~gi~i~~G~~~--~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 313 DEDAQADFAKE-LISTLEKEGVAYDIGSYR--DAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred ccchhhHHHHH-HHHHHHHCCEEEeccccc--cCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 0 0 0000223 444556779999887632 2346799966 447999999999988644
No 352
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.46 E-value=6e-11 Score=120.60 Aligned_cols=287 Identities=17% Similarity=0.190 Sum_probs=168.2
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh------HHHHhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF------DRDLKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~------~~~~~~~~g~~~~ 161 (469)
+..+++.+|++++ .+..+++++++.|+..++.+ +.+||.|++.+..|..| ...++.. |++++
T Consensus 124 ~~~le~~lA~l~g----------ae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~-G~~~~ 191 (454)
T TIGR00474 124 YSHVEGLLCELTG----------AEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVMEQS-GAKLV 191 (454)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHHHc-CCEEE
Confidence 4788888888875 23355677788889888855 58999999998764322 2344555 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC--C--CCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL--G--TTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt--G--~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
.++.+. ..+++++++++++ ++++|++.+++|++ | ...+ +++|+++|++||+++++|.+.+-+.
T Consensus 192 ~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~ 258 (454)
T TIGR00474 192 EVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLV 258 (454)
T ss_pred EeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 997642 1478899998865 89999999999995 6 3556 5568999999999999998643210
Q ss_pred ----cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHH-
Q 043923 238 ----FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQY- 310 (469)
Q Consensus 238 ----~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~- 310 (469)
|+-...+.+.... ..+..+++.|.+|.+|-| ..|++++.++.+ +.+++..- ...+.-....
T Consensus 259 ~~~~~gl~~~p~~~~~~---------~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i-~~l~~~~l~r~lr~~k~~la~ 326 (454)
T TIGR00474 259 DLSRYGLPDEPTVQEVI---------AAGVDLVTFSGDKLLGGP--QAGIIVGKKELI-ERLKKNPLTRALRVDKLTLAA 326 (454)
T ss_pred cchhccCCCCcccccHh---------HcCCCEEEecCccccCCC--eEEEEEECHHHH-HhhhhchhHHHHhhChHHHHH
Confidence 1100111111221 225568889999998634 489999865444 22221100 0012222222
Q ss_pred ---HHHHHhcCch-h----hHHHHHHHHHHHHHHHHHHHHHHHhc---CC--ceecCC----ce---------EEEEEec
Q 043923 311 ---LLSALLSDKK-F----TQNYISENKKRLKQRHRKLVSGLEKA---GI--SCLKSN----AG---------LFCWVDM 364 (469)
Q Consensus 311 ---~~~~~l~~~~-~----~~~~~~~~~~~l~~~~~~l~~~L~~~---g~--~v~~~~----~g---------~~~~v~~ 364 (469)
.+..++...+ + ..+.+....++++++...+.+.|++. ++ ++.+.. || +-+.++.
T Consensus 327 l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~ 406 (454)
T TIGR00474 327 LEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP 406 (454)
T ss_pred HHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec
Confidence 2222222111 1 01223334556667778888888763 22 333322 12 1222221
Q ss_pred ccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 365 RHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
.. ....++. +.|++....|..- -.++.+.+-+..+.+++++.++++|
T Consensus 407 ~~-------~~~~~l~-~~lr~~~~~ii~r-----~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 407 DG-------LSAEKLE-ARLRELPPPIIGR-----IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CC-------CCHHHHH-HHHhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 11 1122343 4455655333311 2366788888878889999888876
No 353
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.44 E-value=5.8e-11 Score=121.16 Aligned_cols=334 Identities=11% Similarity=0.108 Sum_probs=170.4
Q ss_pred CCCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC
Q 043923 33 EVQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 33 ~~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~ 108 (469)
.......+||+..+ .+.+. .|.+.+++++.. .....|... .+.+-.+|+.+.+...
T Consensus 43 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~-------------~~~~~~~~~---~~~~~~la~~l~~~~p---- 102 (431)
T PRK06209 43 WDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREAL-------------QDGCNFTRP---SAIELDAAESFLELID---- 102 (431)
T ss_pred EeCCCCEEEEccccccchhcCCCCHHHHHHHHHHH-------------HhCcCCCCC---CHHHHHHHHHHHHhCC----
Confidence 33444568998765 34443 466777766632 112223211 2333344555543321
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcC-CC-CEEEEc-cCCCcChHHH----HhhhCCCE------EEEeeccCCCCcccCH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAE-PG-EAFLLP-TPYYPGFDRD----LKWRTGVE------IVPIQCTSLNGFQITE 175 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~-~g-d~Vl~~-~P~y~~~~~~----~~~~~g~~------~~~v~~~~~~~~~~d~ 175 (469)
..+.+++++++++|+..+++.... .| ..|+.. .-.|..+... .....|.. +..++. .|+
T Consensus 103 -~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~d~ 174 (431)
T PRK06209 103 -GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY-------NDI 174 (431)
T ss_pred -ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC-------CCH
Confidence 236899999999999999886421 23 345443 2222211100 00000110 111111 267
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
+.+++.+++. ..++.+|++ -|. .|...+.+.+++|.++|++||+++|+||++.++.+.. ........
T Consensus 175 ~~l~~~l~~~---~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~---~g~~~~~g---- 241 (431)
T PRK06209 175 ASLEALFEDH---PGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM---RGAQKLYG---- 241 (431)
T ss_pred HHHHHHHHhC---CCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc---chhhHHhC----
Confidence 8888888641 124555444 453 3457788899999999999999999999997753221 11111111
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH--HHH---h-----cccccCcHHHHHHHHHHhc---Cchhh
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA--ATK---M-----SSFGLVSSQTQYLLSALLS---DKKFT 322 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~--~~~---~-----~~~~~~s~~~q~~~~~~l~---~~~~~ 322 (469)
..+. +.+++|.+| .|+.+|++++++ .+.+. +.. . ......++++..++.+.|+ +.+.
T Consensus 242 ----v~PD---i~t~gK~lg-gG~p~~av~~~~-~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~- 311 (431)
T PRK06209 242 ----IVPD---LSCFGKALG-NGFAVSALAGKR-EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV- 311 (431)
T ss_pred ----CCcc---eeeehhhhc-CCcccEEEEEHH-HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH-
Confidence 1122 247899998 789999999954 44443 110 1 1111234455444444433 3222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcee-cCCceEEEEEecccccc-cCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGISCL-KSNAGLFCWVDMRHLLR-SNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~~g~~~~v~~~~~~~-~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+++.++.-...++.|.+...++++... ...+.++...-+..... .....-...+...++ ++||.+.|
T Consensus 312 ---~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~------- 380 (431)
T PRK06209 312 ---IERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS------- 380 (431)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc-------
Confidence 222222222233333333334554421 11222222111111000 011011113445554 56997621
Q ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 401 EPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 401 ~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++++.. +++++|++++++|.+++++..+
T Consensus 381 ----l~is~~-ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 381 ----LVVSYA-HGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred ----cccccc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 466643 5999999999999999988743
No 354
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.43 E-value=5.3e-11 Score=125.22 Aligned_cols=172 Identities=14% Similarity=0.124 Sum_probs=116.5
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (469)
+.+..+.+|+.++ .....+++||+|.++.+++.+++.+||.|+++..+|-+..+++.+. |+++++++-..
T Consensus 197 i~eAe~~aA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLils-ga~PVYl~P~~ 266 (713)
T PRK15399 197 HLEAEEYIARTFG---------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMS-DVVPIWLKPTR 266 (713)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeeEEecccc
Confidence 4566666677665 3456889999999999999999999999999999999999888877 99999986432
Q ss_pred CCCcc----cCH-----HHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE-EEeccccccc
Q 043923 168 LNGFQ----ITE-----TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL-ISDEIYSGTV 237 (469)
Q Consensus 168 ~~~~~----~d~-----~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i-I~Deay~~~~ 237 (469)
+.|. ++. +.++++|.+.+. ..+++++++++|+. .|.+++.++ |++.| |+.+ ++||||..+.
T Consensus 267 -n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~pTY-dGi~yd~~~---I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 267 -NALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNSTY-DGLLYNTDW---IKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred -cccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECCCC-CceeeCHHH---HHHHh---CCCEEEEeccchhhh
Confidence 2333 334 888888875431 12457899998854 899999666 55555 4555 6999998642
Q ss_pred -cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEE-EEEe
Q 043923 238 -FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVG-AIYS 286 (469)
Q Consensus 238 -~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG-~li~ 286 (469)
|... +.+...+... .+....++++.|.+|.+ +++.-+ +|..
T Consensus 338 ~F~p~-~~~~sam~~~-----~~aD~~i~~tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 338 HFHPI-YQGKSGMSGE-----RVPGKVIFETQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred hcCcc-cCCcChhhCC-----CCCCeeeeeeeehhccc--cccchheeeee
Confidence 3221 1111111110 00223456689999997 555544 4444
No 355
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.41 E-value=6.4e-11 Score=118.13 Aligned_cols=262 Identities=16% Similarity=0.177 Sum_probs=163.2
Q ss_pred CCCcHHHHHHHHHHHHhHcCCCCCC---CCCcEEEeCChHHHHHHHHHHhcC--------C-----CC-EEEEccCCCcC
Q 043923 85 YHGLPAFKKALVEFMSEIRGNKVTF---DTSKIVLTAGATSANETLMFCLAE--------P-----GE-AFLLPTPYYPG 147 (469)
Q Consensus 85 ~~g~~~Lr~aia~~l~~~~~~~~~~---~~~~i~~t~G~~~al~~~~~~l~~--------~-----gd-~Vl~~~P~y~~ 147 (469)
.+...++++.+.+++.+.+|..-.. ....=++|+|+++++..++.+..+ . ++ .|++.+-+|..
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS 153 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH
Confidence 3456889999999999887732110 124577999999999888766421 1 22 45666667888
Q ss_pred hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 148 FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 148 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
...++... |+.++.||+++ ++.+|+++|+++|++...++..+-+|+.+-.+..||.+= ++++|+++|+++++++
T Consensus 154 ~~Kaa~~l-Glg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D---~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 154 IEKAARIL-GLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID---PLEEIADICEKYNIWL 227 (373)
T ss_dssp HHHHHHHT-TSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHHHHHCT-EE
T ss_pred HHHhccee-eeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCccccccc---CHHHHhhhccccceee
Confidence 88888887 99999999985 568999999999987655554454666777788899884 4667999999999999
Q ss_pred EEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-HHHHhcc------
Q 043923 228 ISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKMSS------ 300 (469)
Q Consensus 228 I~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~-~~~~~~~------ 300 (469)
.+|.+|++..+-.+.......-++ .-.-+..+++|.++ ....+|+++..++.... .......
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~----------~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIE----------RADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGG----------GESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred eecccccccccccccccccccccc----------cccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccc
Confidence 999999974332222222222211 23344559999997 66799999987765332 2210000
Q ss_pred -----------cc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEec
Q 043923 301 -----------FG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDM 364 (469)
Q Consensus 301 -----------~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~ 364 (469)
+. ..+. ...++..++.-..+..+-+.+..++..+..+++.+.+++. ++++..+..-..+++++
T Consensus 297 ~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred cccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 11 1222 2222322222111224445666677777888999999988 47766544434555543
No 356
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.38 E-value=2.5e-10 Score=116.46 Aligned_cols=280 Identities=16% Similarity=0.123 Sum_probs=151.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------------------------CC---CEEEEccCCCcChHHHHhhhCCCE--
Q 043923 111 TSKIVLTAGATSANETLMFCLAE--------------------------PG---EAFLLPTPYYPGFDRDLKWRTGVE-- 159 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~--------------------------~g---d~Vl~~~P~y~~~~~~~~~~~g~~-- 159 (469)
.+.+++++++++|++.+++.... +| ..|+....+|++....+....|..
T Consensus 122 ~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~ 201 (464)
T TIGR00699 122 QDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPI 201 (464)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 36899999999999999987621 11 268988988877654332221211
Q ss_pred ---------EEEeeccCC-CCc-----------ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHH
Q 043923 160 ---------IVPIQCTSL-NGF-----------QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLV 217 (469)
Q Consensus 160 ---------~~~v~~~~~-~~~-----------~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~ 217 (469)
+..+|.... ..+ .-+++.+++.+++ ...++.+|++..-....|... +.+-+++|.
T Consensus 202 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr 278 (464)
T TIGR00699 202 HKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLR 278 (464)
T ss_pred cccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 111222110 000 0124455555542 123577766653355567765 788999999
Q ss_pred HHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH--HH
Q 043923 218 NIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA--AA 295 (469)
Q Consensus 218 ~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~--~~ 295 (469)
++|++||+++|.||++.++...+..+ ..+... + ...+.+ .+++|.+|..| ++++. +.+.. ..
T Consensus 279 ~lc~~~g~lLI~DEV~tGfGrtG~~f--a~e~~g-v-----~~~PDi---~t~gK~lg~gG----~~~~~-~~~~~~~~~ 342 (464)
T TIGR00699 279 DITKKHNVAFIVDEVQTGVGATGKFW--AHEHWN-L-----DDPPDM---VTFSKKFQTAG----YFFHD-PAFRPNKPY 342 (464)
T ss_pred HHHHHcCCEEEEeeeeeCCCCCcchh--HHHhcC-C-----CCCCCE---EEehhhhccCC----ccccc-hhccCCCCc
Confidence 99999999999999998742222111 111111 0 001223 36799996234 44442 22111 00
Q ss_pred HHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh----cCCce--e-cCCceEEEEEeccccc
Q 043923 296 TKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK----AGISC--L-KSNAGLFCWVDMRHLL 368 (469)
Q Consensus 296 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v--~-~~~~g~~~~v~~~~~~ 368 (469)
....+++ .++++..++.+.|+...- +...+..++.-++|.+.|++ ++..+ . ....|+++-+.++..
T Consensus 343 ~~~~T~~-gnp~~~aaa~a~L~~l~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~- 415 (464)
T TIGR00699 343 RQFNTWM-GDPSRALILREIIQEIKR-----KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE- 415 (464)
T ss_pred ccccCCC-CCHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-
Confidence 0112222 455555555544432110 11222222233334444433 33111 1 113468888887531
Q ss_pred ccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 369 RSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 369 ~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
.....++..++ ++||.+.+. +.+.+|+.... ++++++++++++|.+++
T Consensus 416 -----~~~~~i~~~~~-~~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 416 -----AKRDKLLKKAR-NNGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -----HHHHHHHHHHH-HCCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 11234555555 569999753 24679999977 49999999999998764
No 357
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.38 E-value=1e-09 Score=112.26 Aligned_cols=284 Identities=13% Similarity=0.124 Sum_probs=152.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------C---C-CCEEEEccCCCcChHHHHhhhCCCEEE-----------Eeec
Q 043923 111 TSKIVLTAGATSANETLMFCLA----------E---P-GEAFLLPTPYYPGFDRDLKWRTGVEIV-----------PIQC 165 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~----------~---~-gd~Vl~~~P~y~~~~~~~~~~~g~~~~-----------~v~~ 165 (469)
.+.|+++++++||++.+++... . + ..+|+...-+|++....+....|.... .++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 4689999999999999998762 1 1 257888888887765433322121100 0110
Q ss_pred cCC----CCcc---c------CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 166 TSL----NGFQ---I------TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 166 ~~~----~~~~---~------d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
... .+.. . +++++++.+.. ...++.+||+.-...-.|. ..|.+.+++|.++|++||+++|.||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DE 266 (443)
T PRK08297 190 PKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDE 266 (443)
T ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 000 0000 0 12334444432 2336776665532444454 4788999999999999999999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH----HH---HhcccccC
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA----AT---KMSSFGLV 304 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~----~~---~~~~~~~~ 304 (469)
++.++...+..+ ..+... ..+.++ +++|.++ +|.+++.+. +... +. .....+..
T Consensus 267 V~tGfGRtG~~~--a~~~~g--------v~PDiv---~~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~~~~~T~~g 327 (443)
T PRK08297 267 VQTGVGLTGTAW--AYQQLG--------VRPDIV---AFGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSSRINSTWGG 327 (443)
T ss_pred hhhccCccchHH--HHHhcC--------CCCCEE---Eeccccc-----ccceecchH-HHHhhhhhccCccccCCCCCc
Confidence 998742222211 111111 223333 5799874 233333232 2111 11 01111225
Q ss_pred cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eecCCceEEEEEecccccccCChhHHHHHHHH
Q 043923 305 SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS--CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 305 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~--v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
++++..++.+.|+.... .+.+++.++.-+..++.|.+..++.+.- ..... |.++.+.++.. .....++..
T Consensus 328 npl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~------~~~~~~~~~ 399 (443)
T PRK08297 328 NLVDMVRARRILEVIEE-DGLVENAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTT------ADRDEVIRR 399 (443)
T ss_pred cHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCH------HHHHHHHHH
Confidence 66676666666552211 1112222222222222233322333311 12233 57888887531 122346666
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
++ ++||.+.|+. ...+|++.+. ++++++++++++|.+++++.
T Consensus 400 l~-~~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LW-EEGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HH-HCCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 66 6799998753 2468997665 59999999999999998753
No 358
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.34 E-value=6e-10 Score=112.90 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=127.4
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
.-+.+..+.+|+.++ .....+++||++.++..++.+++.+||.|+++.++|-+....+-+. |+..+++.-
T Consensus 70 G~i~eAqe~aA~~fg---------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila-Ga~Pvyl~p 139 (557)
T COG1982 70 GPIKEAQELAARVFG---------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA-GATPVYLEP 139 (557)
T ss_pred ccHHHHHHHHHHHhC---------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHc-CCceEEecC
Confidence 345777788888875 3446789999999999999999999999999999999998887777 999888765
Q ss_pred cCCCCc----ccCHHHHHHHHHHHHhcCCce-eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 166 TSLNGF----QITETAIEEAYQLAQKRHLKV-KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 166 ~~~~~~----~~d~~~l~~~i~~~~~~~~~~-~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
..+..| .++.+.+++++.+. +.. ++++++||+. .|.+++.++ +++.+.++++++.+||++.-. ++-
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~----~~~~k~~vitnpTY-dGv~~n~~~---i~~~~~~~~a~v~~deah~~~-~~~ 210 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAH----PDAEKLAVITNPTY-DGVCYNLRK---IVELLHHYGAWVLYDEAHPAH-FDF 210 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhC----hhhheeEEEecCcc-ceEeecHHH---HHHHHhhcCceEEhhhcCccc-ccc
Confidence 433323 36889999887653 244 8889998876 799998555 777788999999999998743 433
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEec
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN 287 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~ 287 (469)
.+...-... ..+.+++..|.+|.++ +.-...+|...
T Consensus 211 ~~~l~~~~~----------~~~~~~~tqS~HK~l~-alSQaS~iHv~ 246 (557)
T COG1982 211 SPMLPESAL----------NGGADFVTQSTHKLLA-ALSQASMIHVK 246 (557)
T ss_pred cccCcchhh----------hcCceEEEechhhhhh-hhhhhHHHhhC
Confidence 221111111 2477899999999985 44344455444
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.33 E-value=5.4e-10 Score=122.21 Aligned_cols=277 Identities=15% Similarity=0.137 Sum_probs=171.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCC--CEEEEccCCCcChHHHHhhh---CCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPG--EAFLLPTPYYPGFDRDLKWR---TGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~g--d~Vl~~~P~y~~~~~~~~~~---~g~~~~ 161 (469)
..++++.||++.+ ++++++.++.++|.+.++++.++ ..+| ++|++++-.|+.+...++.. .|++++
T Consensus 150 l~~~Qt~ia~LtG--------~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~ 221 (993)
T PLN02414 150 LLNYQTMITDLTG--------LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVV 221 (993)
T ss_pred HHHHHHHHHHHhC--------CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEE
Confidence 3456677777775 78999999999999999888776 3434 78999999999887655331 399999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+.. + ... ..+..+++.+|+ .+|.+.+ +++|+++|+++|+++++ .+.. ..-.
T Consensus 222 ~v~~~~~-----~------~~~------~~v~~vlvq~P~-~~G~v~d---v~~I~~~ah~~GaL~iV-aad~---lal~ 276 (993)
T PLN02414 222 VADEKDF-----D------YSS------GDVCGVLVQYPA-TDGEVLD---YAEFVKNAHANGVKVVM-ATDL---LALT 276 (993)
T ss_pred Eecchhh-----c------ccc------CceEEEEEecCC-CCeEEcC---HHHHHHHHHHcCCEEEE-EECH---HHhc
Confidence 8886421 1 000 134445555555 4999987 55689999999999999 4443 2111
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCcccc---CCCcceEEEEEecCHHHHHHHH-Hhc------------------
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL---GLPGFRVGAIYSNDDMVVAAAT-KMS------------------ 299 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---g~~GlRiG~li~~~~~~~~~~~-~~~------------------ 299 (469)
...+.. ..+..+++++..|+. |..|-+.|++.+.++..+ .+. .+.
T Consensus 277 ~l~~pg------------e~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r-~~PgriVG~s~d~~g~~~~~l~Lqt 343 (993)
T PLN02414 277 MLKPPG------------EWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR-LMPGRIIGVSVDSSGKPALRMAMQT 343 (993)
T ss_pred CCCCHh------------hccCcEEEECCCccccCCCCCCCCeeEEEECHHHHh-hCCCcccCcccCCCCCccccccccc
Confidence 111222 235678888888875 234556899988654432 111 000
Q ss_pred -------ccccCcHHHHHHHHHHhcCc---hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccc
Q 043923 300 -------SFGLVSSQTQYLLSALLSDK---KFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR 369 (469)
Q Consensus 300 -------~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~ 369 (469)
.-++.+..+..++.+.+... .+...-+++..+++.+...++.+.|...|+++..+...--+.++++.
T Consensus 344 ReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~~--- 420 (993)
T PLN02414 344 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCSD--- 420 (993)
T ss_pred ccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecCC---
Confidence 01122332222222222111 00012256666777888888999998888876543211123344431
Q ss_pred cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHHH
Q 043923 370 SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLKA 426 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~~ 426 (469)
..++.++|+ ++||.++... .+.+|+|+... +++||+.++++|+.
T Consensus 421 ------~~~v~~~L~-~~gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ------ADAIADAAA-KVGINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ------HHHHHHHHH-HCCCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 124566665 6699776321 34699999874 89999999999974
No 360
>PLN02452 phosphoserine transaminase
Probab=99.32 E-value=3.3e-09 Score=105.29 Aligned_cols=332 Identities=15% Similarity=0.133 Sum_probs=196.3
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
.+++|+-|...+|++.+.++.+...+- ...|.+.+ +..+.. ....++.+.+.+.+++.++ ++-+.+-+++..
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~---~~~g~s~~-~~sHRs--~~f~~i~~~~~~~L~~l~~--~p~~y~v~~l~G 78 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNW---EGSGMSVM-EMSHRG--KEFLSIIQKAEADLRELLD--IPDNYEVLFLQG 78 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcc---cccCcccc-ccCCCc--hHHHHHHHHHHHHHHHHhC--CCCCceEEEEeC
Confidence 367888888778877766665542110 00111111 122222 2335666666666666554 111223466778
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeeccCCCCc--ccCHHHHHHHHHHHHhcCCceeE
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQCTSLNGF--QITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
|++.++..++..|+.+|+++++....+.+ ....++.. |...+..... .++| .+++++++. +++.+.
T Consensus 79 sgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~ 148 (365)
T PLN02452 79 GASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKY-CKTNVIASGK-DEKYTKIPSVSEWEL--------TPDAKF 148 (365)
T ss_pred ccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCCcEEEecC-CCCCCCCCChHHcCC--------CCCCcE
Confidence 89999999999999999988887765433 23345555 6543333211 1222 245555421 236777
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|.+++-...||..++ ++.++. ++++|+|.+.+ +...+ ..+..+ + ++ ..|..|.+
T Consensus 149 v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~Ss---~g~~p-idv~~~------------~-v~-~~saqK~l 202 (365)
T PLN02452 149 VHICANETIHGVEFK--DYPDVG------NVPLVADMSSN---FLSKP-VDVSKY------------G-VI-YAGAQKNV 202 (365)
T ss_pred EEECCCCCCCcEecC--cccccC------CCeEEEECCcc---ccCcc-cCHHHc------------C-EE-EEeccccc
Confidence 788877778999643 122232 37999999987 55443 333222 2 23 35999999
Q ss_pred CCCcceEEEEEecCHHHHHHHH-------------HhcccccCcHHHHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYSNDDMVVAAAT-------------KMSSFGLVSSQTQYLLSALLSDKKFTQN--YISENKKRLKQRHRK 339 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~-------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~ 339 (469)
|.+| +|.+++.++.+..... ..+.+++++....+++..+|+- +.+ -++.+.++.++..++
T Consensus 203 GP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~---l~~~gGl~~~~~r~~~~a~~ 277 (365)
T PLN02452 203 GPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFED---LLAQGGLKAMEKRNIRKADL 277 (365)
T ss_pred CCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHH
Confidence 9887 7888886555432111 0111234445555555544432 122 267788888899999
Q ss_pred HHHHHHhc-CCce--ec-C-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CC
Q 043923 340 LVSGLEKA-GISC--LK-S-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 413 (469)
Q Consensus 340 l~~~L~~~-g~~v--~~-~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~ 413 (469)
+++.|++. |+.. .. . .+.+.+.+.+++. ..+.++ .+.++++|+...+|..-- .+ +|+++-. ++
T Consensus 278 l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~------~~~~~f-~~~~~~~g~~~~~G~r~~---gg-~R~s~yna~~ 346 (365)
T PLN02452 278 LYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS------ELEAEF-VKEAAKAGMVQLKGHRSV---GG-MRASIYNAMP 346 (365)
T ss_pred HHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc------hhHHHH-HHHHHHCCCcccCCcccc---Cc-eEEECcCCCC
Confidence 99999985 6611 11 1 2445666666642 123344 445568899999987532 23 9998844 69
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043923 414 EDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l~~ 430 (469)
.++++.+++.++++-++
T Consensus 347 ~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 347 LAGVEKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999888765
No 361
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.31 E-value=4.2e-09 Score=107.56 Aligned_cols=281 Identities=11% Similarity=0.082 Sum_probs=149.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEEccCCCcChHHHHhhhCCCE-EE--Eee--------c
Q 043923 111 TSKIVLTAGATSANETLMFCLAE--------------PGEAFLLPTPYYPGFDRDLKWRTGVE-IV--PIQ--------C 165 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y~~~~~~~~~~~g~~-~~--~v~--------~ 165 (469)
.+.+++++++++|++.+++.... .+.+|+...-+|++....+....|.. .. ..| .
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 46899999999999999887521 13678888888877653332221311 00 001 0
Q ss_pred cC------CCCcc-------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEec
Q 043923 166 TS------LNGFQ-------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 166 ~~------~~~~~-------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
.. ...+. -++++++..+.. ...++.++++.-...-.|.. .+.+.+++|.++|++||+++|+||
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 259 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDE 259 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 00 00000 012333334432 23467777766445556754 688999999999999999999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH--HHHH-HHHH---hcccccCc
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD--MVVA-AATK---MSSFGLVS 305 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~--~~~~-~~~~---~~~~~~~s 305 (469)
++.++...+..+ ..+... ..+.++ +++|.+ +. .|++.. +. .+.. .... .......+
T Consensus 260 V~tG~GrtG~~~--a~~~~g--------v~PDi~---~~gK~~--~~--~g~~~~-~~i~~~~~~~~~~~~~~~~T~~gn 321 (431)
T TIGR03251 260 VQTGVGLTGTAW--AYQQLG--------VQPDIV---AFGKKT--QV--CGIMAG-RRVDEVADNVFAVPSRLNSTWGGN 321 (431)
T ss_pred chhccCccchHH--HHHhcC--------CCCCEE---EecccC--cc--ceEEec-chHHHhhhhcccCccccCCCCCCC
Confidence 999743222111 111111 123333 478886 21 255544 32 1111 1110 11112255
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCCceEEEEEecccccccCChhHHHHHHHHHH
Q 043923 306 SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIV 384 (469)
Q Consensus 306 ~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll 384 (469)
+++..++.+.|+-..- .+..++.++.-+..++.|.+..++.. +.......|.++.+.++.. .....++..++
T Consensus 322 pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l~ 394 (431)
T TIGR03251 322 LVDMVRATRILEIIEE-ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVIRQLY 394 (431)
T ss_pred HHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHHHHHH
Confidence 6666666555543110 11122222222222333333223333 3221222357777877531 12234556655
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
++||.+.|.. .+.+|++.+. ++++++++++++|.+
T Consensus 395 -~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 395 -REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 6799997642 2468988876 499999999999876
No 362
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=7.3e-11 Score=112.14 Aligned_cols=309 Identities=14% Similarity=0.182 Sum_probs=189.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
|+...-+.+|.+.||+|++ ..+.|+...|-+ ++..++.++++.||.|.+..-........++.. .-.++
T Consensus 135 YGt~DvHldlE~~iakF~G---------~E~aivYs~gF~-ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlS-RS~i~ 203 (467)
T KOG1358|consen 135 YGTIDVHLDLEKRIAKFMG---------TEDAIVYSYGFS-TIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLS-RSTIS 203 (467)
T ss_pred cccceeecccHHHHHHhhC---------Ccceeeeccccc-hhhhcchhhhccCcEEEEehhhhHHHHHHHhhh-hheeE
Confidence 6666668899999999997 467777777644 567788999999999999888877777777665 66777
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHH---hcCC---c-eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQ---KRHL---K-VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~---~~~~---~-~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
.+..+ |.+.++..+.+.. .+.+ . -+.|++.----+||...+..+ |+++..+|...||+||.|+
T Consensus 204 ~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~---iv~lk~Kyk~RvildEs~S 273 (467)
T KOG1358|consen 204 YFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPE---IVKLKNKYKFRVILDESLS 273 (467)
T ss_pred EecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHH---HHHHHhhheEEEEEecccc
Confidence 77644 5566766553211 1111 2 233444444567999998555 7778889999999999998
Q ss_pred ccccCC--CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--cccc---CcHH
Q 043923 235 GTVFSS--PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGL---VSSQ 307 (469)
Q Consensus 235 ~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~---~s~~ 307 (469)
-...+. .....+... +..+..++++|++-+++..| |+..+ +..+... +++. .+.. .++.
T Consensus 274 fG~lg~~GrGvteH~~v---------~~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~h-QrLSg~~Y~fSAslPp~ 339 (467)
T KOG1358|consen 274 FGVLGKTGRGVTEHFGV---------PITDIDIVTASMETALASGG---GFCAG-KSFIADH-QRLSGSGYCFSASLPPY 339 (467)
T ss_pred cccccccCccccccCCC---------CccceeeeeecccccccccC---ceeec-ceeeEee-eeccccceeeeccCchh
Confidence 433332 211111111 23467788899999887666 77776 3333211 2221 1211 2222
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccC--ChhHHHHHHHHHH
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSN--TFEAEMELWKKIV 384 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~--~~~~~~~l~~~ll 384 (469)
...++..++.-.+ +-....+.++.....+...|... ++.+....-+..+.+.+....... ...--.+++...+
T Consensus 340 la~aa~~ai~i~~----~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i 415 (467)
T KOG1358|consen 340 LAGAAIKAILIEE----WNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCI 415 (467)
T ss_pred hhhhHHHHHHHHh----hCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHH
Confidence 3333333333222 22334455555556677777665 566666555567767766532221 1112245566666
Q ss_pred HhCCeEEeCCCCCCC----CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 385 YDVKLNISPGSSCHC----TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~----~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+ |+.+.-...--. .-+..+|||+.. +++++++++.+.|+++...
T Consensus 416 ~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 416 AE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred hh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 66 887764432211 113359999976 6999999999999987654
No 363
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.30 E-value=2.1e-09 Score=106.84 Aligned_cols=293 Identities=15% Similarity=0.096 Sum_probs=161.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCC-CEEEEccCCCcChHHHHhhhCC-------------CEEEEeeccC--
Q 043923 111 TSKIVLTAGATSANETLMFCLA-------EPG-EAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCTS-- 167 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~-------~~g-d~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~~-- 167 (469)
-++|++++|+++|++.+++... +|. .+++.-...|.+-.-.+....| ..+..+|...
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccc
Confidence 5789999999999999987752 233 3477777777664322111112 0111222211
Q ss_pred -C---CCcc----cCHHHHHHHHHHHHhcC-CceeEEEEecC-CC-CCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 168 -L---NGFQ----ITETAIEEAYQLAQKRH-LKVKGVLVTNP-SN-PLGTT-MSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 168 -~---~~~~----~d~~~l~~~i~~~~~~~-~~~~~vvl~~P-~N-PtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
. +.+. -..++|++.|.. .+ .++.+ ++.-| .. -+|.. +|+.-++++-++|++||+++|.||+-.+
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAA-fI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tG 260 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILE---HGPETIAA-FIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATG 260 (449)
T ss_pred ccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEE-EEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeC
Confidence 0 1111 113444544443 34 24554 55557 33 37764 5677889999999999999999999988
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hccc-----ccCcHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSF-----GLVSSQT 308 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~-----~~~s~~~ 308 (469)
+--.+.-|.+-. .+..+.++ +++|.++-.=+.+|.+++.++ +.+.+.. ...+ .+.++++
T Consensus 261 FGRTG~~FA~e~----------~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~~-I~~~~~~~~~~~f~HG~TYsghPla 326 (449)
T COG0161 261 FGRTGKMFACEH----------AGIVPDIL---CLAKGLTGGYLPLSAVLTSDR-IYEAFSDGDAGAFMHGHTYSGNPLA 326 (449)
T ss_pred CCcCchhhhhhh----------cCCCCCee---eecccccccchhhHhHhhhHH-HHHHHhcccCCeeccCCccccCHHH
Confidence 432333221110 01223344 678988633366777777444 4343322 2211 1245555
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-CCce--ecCCceEEEEEecccccccCCh--hHHHHHHHH
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A-GISC--LKSNAGLFCWVDMRHLLRSNTF--EAEMELWKK 382 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-g~~v--~~~~~g~~~~v~~~~~~~~~~~--~~~~~l~~~ 382 (469)
.+++.+.|+-.+- +...++.++.-.+|.+.|+. + +-+. .-..-|++..+++......+.. ......+..
T Consensus 327 cAaAla~L~i~e~-----e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~ 401 (449)
T COG0161 327 CAAALANLDILEE-----EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRA 401 (449)
T ss_pred HHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHH
Confidence 5555444432111 12233334444556666655 2 1111 1233467877887654332210 111233445
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+.++|+.++|.. ..+=++... +++++++++++++.+.+++..+
T Consensus 402 ~~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 402 AALERGLLIRPLG-------DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred HHHHCCeEEeecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5557799999872 245555554 4999999999999999986544
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.30 E-value=9.6e-10 Score=120.70 Aligned_cols=283 Identities=13% Similarity=0.128 Sum_probs=174.1
Q ss_pred cccCCCCC-----Cc----HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CC--CCEEEEccCCCc
Q 043923 79 LALFQDYH-----GL----PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-EP--GEAFLLPTPYYP 146 (469)
Q Consensus 79 ~~~Y~~~~-----g~----~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~--gd~Vl~~~P~y~ 146 (469)
+..|.|++ |. .++++.+|++.+ +++.++.+..++|++.+.++.++. .+ +++|++++-.|+
T Consensus 105 ~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--------~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP 176 (954)
T PRK05367 105 YTAYTPYQPEISQGRLEALLNFQTMVADLTG--------LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHP 176 (954)
T ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHC--------CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCH
Confidence 44566664 32 344555666554 789999999999999998887762 44 489999999999
Q ss_pred ChHHHH----hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 147 GFDRDL----KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 147 ~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.....+ +.. |++++.++.+.+ ++ . .++.++++.+| |.+|.+.+ +++|+++|++
T Consensus 177 ~~~~v~~t~a~~~-G~ev~~~~~~~d----~~--------~------~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~ 233 (954)
T PRK05367 177 QTLDVLRTRAEPL-GIEVVVGDAAKA----LD--------H------DDVFGVLLQYP-GTSGEVRD---YTALIAAAHA 233 (954)
T ss_pred HHHHHHHHHHHhC-CCEEEEecCccC----CC--------c------ccEEEEEEecC-CCCeeecc---HHHHHHHHHH
Confidence 877554 334 999999986531 11 1 15666777777 46999987 6668999999
Q ss_pred cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc-----cCCCcceEEEEEecCHHHHHHHHH
Q 043923 223 KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD-----LGLPGFRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 223 ~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~-----~g~~GlRiG~li~~~~~~~~~~~~ 297 (469)
+|+++++|.....+ ... .+.. ..+-.++++|..|+ ||-| ..|++.+.++..+..--.
T Consensus 234 ~Gal~~vda~~~Al--~~l--~~pg------------e~GaDi~vgs~qkfg~P~g~GGP--~aGflavr~~~~r~lpgr 295 (954)
T PRK05367 234 RGALVAVAADLLAL--TLL--TPPG------------EMGADIAVGSAQRFGVPMGFGGP--HAAYFAVRDAYKRSMPGR 295 (954)
T ss_pred cCCEEEEEehhhhc--cCC--CChh------------hcCCCEEEeeCcccCCCCCCCCC--CEEEEEECHHHHhhCCCC
Confidence 99999998755221 111 1111 33667888899887 4434 489998855433221000
Q ss_pred hc-------------------------ccccCcHHHHH---HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 298 MS-------------------------SFGLVSSQTQY---LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 298 ~~-------------------------~~~~~s~~~q~---~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
+. .-++.+..... ++.+.+.-..+...-+++..++......++.+.|+..|+
T Consensus 296 ivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~ 375 (954)
T PRK05367 296 IVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGL 375 (954)
T ss_pred eeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 00 00111221111 111111000011223566677777788888999988787
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLK 425 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~ 425 (469)
++..+.-.--+.++++ .+..++.++++ ++||.++.- .++.+|+|+... ++++|+.+++.|.
T Consensus 376 ~~~~~~~f~~~~~~~~--------~~~~~i~~~l~-~~gi~~~~~------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 376 EVVHDSFFDTLTVEVG--------GDAAAVLARAL-AAGINLRRV------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ccCCCCCCCeEEEeCC--------CCHHHHHHHHH-HCCceeccc------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 7653321111223332 12235666665 669988421 145799999874 8999999999997
No 365
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.29 E-value=2.1e-09 Score=101.32 Aligned_cols=330 Identities=16% Similarity=0.171 Sum_probs=211.2
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----CCEEEEccCCCcChHHHH
Q 043923 78 ELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP-----GEAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 78 ~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-----gd~Vl~~~P~y~~~~~~~ 152 (469)
....|....++..|.+++.+.++ -+.++.|.-+..|-.+++..+.++ |.+.++++..|....+.-
T Consensus 71 GDEAYagsrs~~~L~~avkdifG----------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h 140 (471)
T COG3033 71 GDEAYAGSRSYYALADAVKDIFG----------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH 140 (471)
T ss_pred cchhhcccccHHHHHHHHHHhcC----------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH
Confidence 34568888899999999988885 356778888888888888777654 455566666665554443
Q ss_pred hhhCCCEEEEeeccCCCC--------cccCHHHHHHHHHHHHhcCCceeEEEEecCCC-CCCCCCCHHHHHHHHHHHHhc
Q 043923 153 KWRTGVEIVPIQCTSLNG--------FQITETAIEEAYQLAQKRHLKVKGVLVTNPSN-PLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~--------~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~N-PtG~~~s~e~l~~l~~~~~~~ 223 (469)
....|..++.++.++..+ .++|++.|++.|++.-.. ++..|+++-.+| -.|+..|.+.++++.++|++|
T Consensus 141 ~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky 218 (471)
T COG3033 141 IQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY 218 (471)
T ss_pred HHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc
Confidence 333388887777654333 237899999999875221 466666665555 668999999999999999999
Q ss_pred CeEEEEecccccc--ccC-----CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHH---HH
Q 043923 224 NIHLISDEIYSGT--VFS-----SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDM---VV 292 (469)
Q Consensus 224 ~~~iI~Deay~~~--~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~---~~ 292 (469)
++.++.|.+...- +|- +-...++.++..++- .+. .-+..|.-|. |+.- + |++...++. +-
T Consensus 219 ~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~-----sYa-D~~~mS~KKD-~lvn--mGGfl~~~D~~~fDvy 289 (471)
T COG3033 219 DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMY-----SYA-DGCTMSAKKD-GLVN--MGGFLCFKDDSFFDVY 289 (471)
T ss_pred CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHH-----hhh-hhheeecccc-ceec--cccEEEecCccHHHHH
Confidence 9999999865210 011 112345555544320 011 1122344453 2322 3 566555542 22
Q ss_pred HHHHH-------hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecc
Q 043923 293 AAATK-------MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 293 ~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~ 365 (469)
...+. +.+++..+.-...+++.-|.+.-- .+|++.+..+ .++|.+.|++.|+++..|.||.-++++..
T Consensus 290 ~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv~Q----v~YL~~~l~~~GVpi~~paGGHavfvda~ 364 (471)
T COG3033 290 EECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRVAQ----VQYLADGLEEAGVPIVQPAGGHAVFVDAG 364 (471)
T ss_pred HHHHhheEeeccccccCcccchhHHHHHHHHHHhcC-cHHHHHHHHH----HHHHHHHHHhcCCeeEecCCCceEEeehh
Confidence 22222 124455555556666666655433 4455544433 37789999999999999999999999876
Q ss_pred ccccc--CChhHHHHHHHHHHHhCCeEEeCCCCCC--CCC---------CCeEEEEeec--CCHHHHHHHHHHHHHHHHh
Q 043923 366 HLLRS--NTFEAEMELWKKIVYDVKLNISPGSSCH--CTE---------PGWFRVCFAN--MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 366 ~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~--~~~---------~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~ 430 (469)
+.... ........++..|.++.||...--..|. .+. -.-+|+++.. .+.+.++..+++++++.+.
T Consensus 365 ~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 365 KFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred hhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 54321 1223445788888899999776433232 111 1369999965 3899999999999998876
Q ss_pred hcc
Q 043923 431 ITT 433 (469)
Q Consensus 431 ~~~ 433 (469)
.++
T Consensus 445 ~~~ 447 (471)
T COG3033 445 AED 447 (471)
T ss_pred ccc
Confidence 544
No 366
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.26 E-value=1.3e-08 Score=110.06 Aligned_cols=215 Identities=13% Similarity=0.102 Sum_probs=122.6
Q ss_pred CceeEEEEecC--CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 190 LKVKGVLVTNP--SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 190 ~~~~~vvl~~P--~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.++.++|+. | +.-.|.. .+.+-+++|.++|++||+++|.||++.++.-.+.-+ . .+... ..+.++
T Consensus 583 ~~iAAvI~E-PviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a-~e~~g--------v~PDIi- 650 (817)
T PLN02974 583 GHIAALIIE-PVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-A-WELLG--------CKPDIA- 650 (817)
T ss_pred CCEEEEEEe-ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-h-HHhcC--------CCCCEE-
Confidence 356665555 5 4666775 478899999999999999999999999853333221 1 11111 223444
Q ss_pred EccCccccCCCc-ceEEEEEecCHHHHHHHHH------h-c-ccccCcHHHHHHHHHHhc---CchhhHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK------M-S-SFGLVSSQTQYLLSALLS---DKKFTQNYISENKKRLK 334 (469)
Q Consensus 267 i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~------~-~-~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~ 334 (469)
+++|.++ .| +.+|.+++. +.+.+.+.. + . ...+.++++..++.+.|+ +.+. ...+.++.+++.
T Consensus 651 --~~gKgLt-gG~~Plaa~l~~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~-~~~l~~~~~~l~ 725 (817)
T PLN02974 651 --CYAKLLT-GGLVPLAATLAT-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPST-NPNLIPPGSRLR 725 (817)
T ss_pred --eeccccc-CCCCccEEEEEc-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccH-HHHHHHHHHHHH
Confidence 6889998 89 699999995 445444421 0 1 112256666666655554 3322 112222222221
Q ss_pred H-HHHHHHHHHHhcCCceecCCceEEEEEecccccccCCh--hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 335 Q-RHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTF--EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 335 ~-~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~--~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
+ ..+.+.+.|.++..-.....-|+++.+++........+ .....+...++.++||.++|.. +.+|+....
T Consensus 726 ~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-------nvi~l~pP~ 798 (817)
T PLN02974 726 ELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-------NVVYLMCGP 798 (817)
T ss_pred HHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-------CEEEEeCCC
Confidence 1 12233334444432111122357777887532111111 1123445555437799999741 468876544
Q ss_pred -CCHHHHHHHHHHHHHHH
Q 043923 412 -MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 -~~~e~i~~~l~~L~~~l 428 (469)
++++++++++++|.+.+
T Consensus 799 ~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 799 TTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 59999999999998865
No 367
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.24 E-value=1.4e-08 Score=96.91 Aligned_cols=312 Identities=13% Similarity=0.126 Sum_probs=177.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHHHhhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRDLKWR 155 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~~~~~ 155 (469)
...|... ...+|-++++..+- -+-..++++|+++||.++++... .+.- .++....+|.+......-.
T Consensus 86 t~~~~~~-pi~~~Ae~L~s~~P--------~~l~~vfF~nsGsEANelal~mar~Yt~~~-diIa~r~~YHG~t~~t~gl 155 (442)
T KOG1404|consen 86 TSGYLNP-PIHDLAEALVSKLP--------GDLKVVFFVNSGSEANELALKMARLYTGNL-DIIARRNSYHGNTLYTLGL 155 (442)
T ss_pred eccccCC-cHHHHHHHHHHhCC--------CCceEEEEecCCchHHHHHHHHHHHhcCCc-eEEEeeccccCCchhhccc
Confidence 3445543 35788888888773 24456999999999999988764 2333 4666666666654333222
Q ss_pred CCCEEEEeeccC--------------CCCcccC-----HHHHHHHHHHH-HhcCCceeEEEEecC-CCCCCC-CCCHHHH
Q 043923 156 TGVEIVPIQCTS--------------LNGFQIT-----ETAIEEAYQLA-QKRHLKVKGVLVTNP-SNPLGT-TMSRNEL 213 (469)
Q Consensus 156 ~g~~~~~v~~~~--------------~~~~~~d-----~~~l~~~i~~~-~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l 213 (469)
.|......+.+. .+-|.-+ .+.+.+.+++. ....+..-+-++.-| .--.|. .+++--+
T Consensus 156 t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYl 235 (442)
T KOG1404|consen 156 TGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYL 235 (442)
T ss_pred ccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHH
Confidence 133222221110 0011111 23333333222 122233333455555 444564 4678899
Q ss_pred HHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH
Q 043923 214 NLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA 293 (469)
Q Consensus 214 ~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~ 293 (469)
+++.++|+++|.++|.||+..++ +.-. ++..+- ..+.+-=+-|++|.+| .|..+|.++. .+++..
T Consensus 236 ka~~~~v~k~Ggl~IaDEVqtGf--GRtG--~~wgfe---------~h~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa~ 300 (442)
T KOG1404|consen 236 KAAYKVVRKRGGLFIADEVQTGF--GRTG--HMWGFE---------SHGVVPDIVTMAKGIG-NGFPLGAVVT-TPEIAD 300 (442)
T ss_pred HHHHHHHHHcCCEEEehhhhhcc--cccc--cccccc---------ccCCCccHHHHHhhcc-CCCcceeeec-CHHHHH
Confidence 99999999999999999999984 3221 333331 2233333559999999 9999999998 556666
Q ss_pred HHHHhc-ccc--cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceec--CCceEEEEEeccc
Q 043923 294 AATKMS-SFG--LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GISCLK--SNAGLFCWVDMRH 366 (469)
Q Consensus 294 ~~~~~~-~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~--~~~g~~~~v~~~~ 366 (469)
.+.+.. .+. ..++++..++.++|.-.. + ++.++.-++.-.+|.+.|.++ +.+.+. ...|+++-+++-+
T Consensus 301 v~~~~~~~fnTyggnP~a~avg~aVL~Vik--e---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~ 375 (442)
T KOG1404|consen 301 VLNQKSSHFNTYGGNPVACAVGLAVLKVIK--E---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVS 375 (442)
T ss_pred HHHhccccccccCCCchhHHHHHHHHHHHH--H---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEec
Confidence 655443 222 245666666666654322 1 223333344445566655554 223322 2346788777643
Q ss_pred cc-ccCCh-hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 043923 367 LL-RSNTF-EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 367 ~~-~~~~~-~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
.. ..... .....+..+-++++|++|--|..++ +.+||+... ++++|++.+++..
T Consensus 376 dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 376 DKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ccCCCCCcchHHHHHHHHHHHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 22 11111 1122333444568899996665553 389998865 5999997777655
No 368
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.19 E-value=1.5e-08 Score=96.63 Aligned_cols=220 Identities=19% Similarity=0.212 Sum_probs=125.6
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccC-CCcChHHHH----------hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTP-YYPGFDRDL----------KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
..++|+||..++..+++|||+++...- -|......+ +.. |+....+++.+++ .+|++.+++++++
T Consensus 78 ~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~-Gi~Y~~v~L~~dg--~~D~~~i~~~~~~- 153 (403)
T PF06838_consen 78 FVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEF-GIKYREVPLTEDG--TIDWEAIKKALKP- 153 (403)
T ss_dssp S-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGG-T-EEEE--B-TTS--SB-HHHHHHHHHT-
T ss_pred ccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHh-CceeEEEeecCCC--CcCHHHHHHhhcc-
Confidence 457899999999999999999986543 476666554 334 8999999998644 5899999999985
Q ss_pred HhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 186 QKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
++|+|++.-. ..-+=..++.+++++++++.++. ++++++|.+|.+|+-..+ +. ..+
T Consensus 154 -----~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E--P~--------------~vG 212 (403)
T PF06838_consen 154 -----NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE--PT--------------EVG 212 (403)
T ss_dssp -----TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS---GG--------------GGT
T ss_pred -----CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC--cc--------------ccc
Confidence 8999888754 33444568999999999999875 899999999999532222 22 225
Q ss_pred eEEEEccCccccCCCcc--eEEEEEecCHHHHHHHHHhcccccCcH--HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHH
Q 043923 263 RVHIVYSLSKDLGLPGF--RVGAIYSNDDMVVAAATKMSSFGLVSS--QTQYLLSALLSDKKFTQNYISENKKRLKQRHR 338 (469)
Q Consensus 263 ~~i~i~S~SK~~g~~Gl--RiG~li~~~~~~~~~~~~~~~~~~~s~--~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 338 (469)
-.++.+|+=|..| .|+ --||+++..+.+..+..++..++...- .+......+++ +-++..++ ..+.++ -..
T Consensus 213 ADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~Q-GlFlAP~v--V~eAlK-gai 287 (403)
T PF06838_consen 213 ADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNRLMFQ-GLFLAPHV--VGEALK-GAI 287 (403)
T ss_dssp -SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHHHHHH-HHHHHHHH--HHHHHH-HHH
T ss_pred hhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHHHHHh-HHhhchHH--HHHHHH-HHH
Confidence 6688999999887 443 238999977767777676665532100 01011111111 11111111 111121 223
Q ss_pred HHHHHHHhcCCceecCC----ceEEEEEeccc
Q 043923 339 KLVSGLEKAGISCLKSN----AGLFCWVDMRH 366 (469)
Q Consensus 339 ~l~~~L~~~g~~v~~~~----~g~~~~v~~~~ 366 (469)
.....++++|+++.|.. +-..-.+.+..
T Consensus 288 f~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~ 319 (403)
T PF06838_consen 288 FAAALFEKLGFEVSPKPDDPRSDIIQAIELGS 319 (403)
T ss_dssp HHHHHHHHTT-EEES-TTS--SSS-EEEE-SS
T ss_pred HHHHHHHHcCCcCCCCCCCCCCceEEEEECCC
Confidence 44556788899988743 33455566653
No 369
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.18 E-value=1.4e-08 Score=97.62 Aligned_cols=291 Identities=17% Similarity=0.120 Sum_probs=162.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC------CCC--EEEEccCCCcChHHHHhhhCCCEEEEeeccC------CCCcccCH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAE------PGE--AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS------LNGFQITE 175 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~------~gd--~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~------~~~~~~d~ 175 (469)
..+.|++.|++|+|+..++....+ +-+ .++....+|++-...+....+......|.++ ...| -|+
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y-nd~ 193 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY-NDS 193 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc-CCH
Confidence 688999999999999999877532 112 3777777776654333221133333332211 0011 267
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
.++++.++.. ...+.+||+.--.--.|.+ .++|-++.|.+.|+++|+++|.||+..++.-.+. .-..++..
T Consensus 194 t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~--~~a~e~~~--- 265 (433)
T KOG1401|consen 194 TALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY--GWAQEYFG--- 265 (433)
T ss_pred HHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch--HHHHHHhC---
Confidence 8888888763 1146776666435556654 5788899999999999999999999998532222 12222322
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc-----cccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
..+. +.++.|.+| .|+.+|..++.++ +.+.+..... ..+.++++..++...+....- .+++++.
T Consensus 266 -----~~PD---I~t~aK~L~-gGlPigA~~v~~k-V~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~-~e~~k~v 334 (433)
T KOG1401|consen 266 -----VTPD---ITTVAKPLG-GGLPIGATGVRDK-VAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD-PETLKNV 334 (433)
T ss_pred -----cCCc---ceeehhhcc-CCceeEEEeehHH-HHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC-HHHHHHH
Confidence 1122 237889998 9999999999544 5444432221 122566666665555443221 2234555
Q ss_pred HHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEeccccccc--CChhHHHHH----HHHHHHhCCeEEeCCCCCCCCCC
Q 043923 330 KKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLRS--NTFEAEMEL----WKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~~~~~~--~~~~~~~~l----~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
.+.-+..++.+.+.+.+..-.... -..|+++.+.+...... +.-.....+ ...+++ .|+.++|-.
T Consensus 335 s~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~------- 406 (433)
T KOG1401|consen 335 SKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIY------- 406 (433)
T ss_pred HHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEeccc-------
Confidence 555555556667766654222221 23345554444322111 000011111 111121 244444400
Q ss_pred CeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 403 GWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 403 ~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
-+++. .++|.++++++.+.+++.+..
T Consensus 407 ---~l~~~-~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 407 ---LLTVE-HTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred ---ccccc-CcHHHHHHHHHHHHHHHHHhc
Confidence 12222 268999999999999887653
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.14 E-value=4e-08 Score=96.75 Aligned_cols=332 Identities=12% Similarity=0.117 Sum_probs=188.1
Q ss_pred eeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCC
Q 043923 40 IIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAG 119 (469)
Q Consensus 40 ~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G 119 (469)
.++|+.|...+|++.++++-++..+- ...|.+.+ +..+.. ....++.+.+.+.+++.++ ++-+.+-+++..|
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~---~~~g~si~-eisHRs--~~F~~i~~~~~~~Lr~Ll~--~P~~y~Vlfl~Gg 76 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVEL---PETGLSVL-GMSHRS--SWFSSLLAQAEADLRDLLG--IPDEYGVVFLQGG 76 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcc---cccCcccc-cccccc--HHHHHHHHHHHHHHHHHhC--CCCCCeEEEEecc
Confidence 46788888888887777766543221 00121211 222222 2345666666666666655 1112223455666
Q ss_pred hHHHHHHHHHHhcCCCCEEE--EccCCCcCh-HHHHhhhCCCEEEEeeccCCCCc--ccCHHHHHHHHHHHHhcCCceeE
Q 043923 120 ATSANETLMFCLAEPGEAFL--LPTPYYPGF-DRDLKWRTGVEIVPIQCTSLNGF--QITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl--~~~P~y~~~-~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++.++..++..|+.+||+++ +.+-.|..- ...++.. | ++..+......+| .++++.++ + .++.+.
T Consensus 77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~-g-~v~~~~~~~~~~~~~~p~~~~~~--~------~~d~~~ 146 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRV-A-AMRVVWDGAASGYRTLPSLAELD--W------DARAPF 146 (364)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhc-C-CceEecCcCCCCCCcCCCHHHhc--c------CCCCcE
Confidence 99999999999999999654 444444432 2334444 5 4333322111122 23444431 1 125677
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|.+|+-...||..++ ++.+.++.++|+|-+-. +.+.+ ..+. +..++..+.-|.+
T Consensus 147 v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~---~~s~p-id~~--------------~~dvi~agsQKnl 200 (364)
T PRK12462 147 RHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSD---FMSRP-FDVE--------------AYGMVYAHAQKNL 200 (364)
T ss_pred EEEccCCCCceEecC--------cccccCCCeEEEEcCch---hhCCC-CChH--------------HccEEEeeccccC
Confidence 777766668899886 12223689999999877 44443 2221 2256677899999
Q ss_pred CCCcceEEEEEecCHHHHHHHH-------------HhcccccCcHHHHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYSNDDMVVAAAT-------------KMSSFGLVSSQTQYLLSALLSDKKFTQN--YISENKKRLKQRHRK 339 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~-------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~ 339 (469)
|.|| ++.++.+++.+..... +.+.+.+++....+++...|+-.. ++ -++.+.++.++..+.
T Consensus 201 gP~G--ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~--~e~GGl~~~~~r~~~ka~~ 276 (364)
T PRK12462 201 GPAG--VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR--DEIGGVHAMRDINARKAAM 276 (364)
T ss_pred CCCc--eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH--HhccCHHHHHHHHHHHHHH
Confidence 9676 5677775554432111 112233455555555554432110 11 256777778888889
Q ss_pred HHHHHHhcC-Ccee---c-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CC
Q 043923 340 LVSGLEKAG-ISCL---K-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MS 413 (469)
Q Consensus 340 l~~~L~~~g-~~v~---~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~ 413 (469)
+++.+.+.. +... + ..+-+-+.+++++. ..+.++. +.++++|+.-.-|..- -+.+|+|+-. ++
T Consensus 277 ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~-~~a~~~gl~~lkGhr~----vgg~Ras~yna~~ 345 (364)
T PRK12462 277 LYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFK-EQSTEAGFCGLSGHRS----IGGIRASLYNAVS 345 (364)
T ss_pred HHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHH-HHHHHCCCccccCCcc----cCceEEEcCCCCC
Confidence 999998874 3222 1 22334555665532 2233444 4456779988766432 3459999954 58
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043923 414 EDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l~~ 430 (469)
.|.++.+++-++++-++
T Consensus 346 ~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 346 EQAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88887777777776554
No 371
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.13 E-value=6.3e-09 Score=102.85 Aligned_cols=248 Identities=17% Similarity=0.089 Sum_probs=137.7
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||+..+ .+.+. .|.+.+++++.. .............+...++++.+.+..+ -..
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~-------------~~~~~~~~~~~~~~~~~~la~~L~~~~p----~~~ 76 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQA-------------NKLNYVSFSGFTHPEAAELAEKLAELFP----GGL 76 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHH-------------HHCSSCSTTTSEEHHHHHHHHHHHHHSS----TTE
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHh-------------hhcccccccceeccchhhhhhhhhhccc----ccc
Confidence 34568898754 44443 456666666531 1111212123345667777777776642 245
Q ss_pred CcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCCCC-
Q 043923 112 SKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSLNG- 170 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~~- 170 (469)
+.+++++++++|++.+++... .....|+...-+|++....+....+ ..+..+|.+....
T Consensus 77 ~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 156 (339)
T PF00202_consen 77 DRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAAD 156 (339)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHH
T ss_pred ceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchh
Confidence 789999999999999998865 1336888888888775432211101 2345555431100
Q ss_pred --cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchh
Q 043923 171 --FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIM 247 (469)
Q Consensus 171 --~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~ 247 (469)
..-..+.+++.+.+. ...++.+|++.--..-.|. ..+.+-+++|.++|++||+++|.||++.++.-.+..+ . .
T Consensus 157 ~~~~~~~~~~~~~~~~~--~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a-~ 232 (339)
T PF00202_consen 157 EEEQACLNALEELIAAL--NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-A-S 232 (339)
T ss_dssp HHHHHHHHHHHHHHHHH--HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-G-H
T ss_pred hhHHHHHHHHHHHHHhh--cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-c-e
Confidence 000011233333222 1236666555532334554 4578889999999999999999999999853333322 1 2
Q ss_pred hhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhc
Q 043923 248 EILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLS 317 (469)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~ 317 (469)
+... ..+.++ +++|.++ .|+.+|.+++.+ .+.+.+.... ..+..++++..++.+.|+
T Consensus 233 ~~~g--------v~PDiv---~~gK~l~-gG~p~sav~~~~-~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 233 EHYG--------VDPDIV---TFGKGLG-GGLPISAVLGSE-EIMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp HHHT--------SSSSEE---EEEGGGG-TTSSEEEEEEEH-HHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred eccc--------ccCccc---ccccchh-hhhhcccccccc-hhhccccccccccccccchHhhhhhhhHHH
Confidence 2211 223344 4679998 889999999954 4444332211 122245666666665554
No 372
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=6.4e-08 Score=90.46 Aligned_cols=276 Identities=17% Similarity=0.193 Sum_probs=163.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------C--C-CC-EEEEccCCCcChHHHHhhh---------CCC----EEEEeeccC
Q 043923 111 TSKIVLTAGATSANETLMFCLA------E--P-GE-AFLLPTPYYPGFDRDLKWR---------TGV----EIVPIQCTS 167 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~------~--~-gd-~Vl~~~P~y~~~~~~~~~~---------~g~----~~~~v~~~~ 167 (469)
-+.|+.+|-+.||.+.++.... + | .. .|+.....|++-.-.+-.. +|- .+..+|++
T Consensus 116 ~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~- 194 (427)
T KOG1402|consen 116 YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG- 194 (427)
T ss_pred cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-
Confidence 6778888888999998887653 1 2 22 3333333343221111111 010 02222321
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
|.++|+.++++ +++.++++.--+--.|.+. +..-+++..++|.+|++++|.||+..++.-.+.- ..
T Consensus 195 ------d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~-la- 261 (427)
T KOG1402|consen 195 ------DAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL-LA- 261 (427)
T ss_pred ------CHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE-EE-
Confidence 67899998875 4777755554477788754 5668899999999999999999999875333321 11
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh---cccccCcHHHHHHHHHHhcCchhh
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM---SSFGLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~ 322 (469)
.++ .+ ..+.+++ +.|+++ .| +.+..++++++ +...++.. ++++ -+++...++.++|.-..
T Consensus 262 ~d~-en-------v~PDivi---lgKalS-GG~~Pvsavl~~~~-im~~~~pgeHgsTyg-gNpLg~~vaiAalevi~-- 325 (427)
T KOG1402|consen 262 CDY-EN-------VRPDIVI---LGKALS-GGVYPVSAVLADDD-IMLNIKPGEHGSTYG-GNPLGCAVAIAALEVIV-- 325 (427)
T ss_pred eeh-hh-------cCCCeEE---Eecccc-CCeeeeEEEEecHH-HHhccCCCccccccC-CChHHHHHHHHHHHHHH--
Confidence 111 11 2233443 569987 44 67888888444 43333322 2333 57777777776664322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--C----ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAG--I----SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSS 396 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g--~----~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~ 396 (469)
+ +...++-+..-..|+..|.++. + +..... |++..+.+... .....+++++|..+ +++|++.-|-.
T Consensus 326 e---ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-Gl~~ai~i~~~--~~~~~~aw~~cl~l-k~~g~LAkptH- 397 (427)
T KOG1402|consen 326 E---EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-GLLNAIVINPS--KTSGQDAWDVCLAL-KENGLLAKPTH- 397 (427)
T ss_pred H---HHHHHHHHHHHHHHHHHHHhccccccchhheeecc-ceEEEEEeccc--cccchhHHHHHHcc-cccccccCCCC-
Confidence 1 2233333444566777777762 2 333333 47766665421 11224556666554 57798877643
Q ss_pred CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 397 CHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 397 f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
.+-||++... +++++++++++.|++.+.
T Consensus 398 -----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 398 -----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred -----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 4589999876 499999999999998764
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.09 E-value=1.3e-07 Score=99.11 Aligned_cols=197 Identities=14% Similarity=0.186 Sum_probs=135.6
Q ss_pred CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----------------------------
Q 043923 84 DYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP----------------------------- 134 (469)
Q Consensus 84 ~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~----------------------------- 134 (469)
..++...+++.+.+++.+.+|. +...=.+|+|+|+|...++.+..+.
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~----~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~ 192 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGY----KNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTK 192 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCC----CCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccc
Confidence 3445688999999999988773 3344558899999888766553210
Q ss_pred -----------------------C------CEEEEccCCCcChHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHH
Q 043923 135 -----------------------G------EAFLLPTPYYPGFDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 135 -----------------------g------d~Vl~~~P~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
| -.++++.-.|.++..++... |+ .++.||++ .++.+|++.|+++|
T Consensus 193 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il-GlG~~~vv~VpvD--~~~rmd~~~L~~~I 269 (608)
T TIGR03811 193 EIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII-GIGLDQVIPVPVD--SNYRMDINELEKII 269 (608)
T ss_pred cccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc-CCCcccEEEeecC--CCCcCCHHHHHHHH
Confidence 0 05777777788888888877 88 58999987 46789999999999
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe--EEEEeccccccc---cCCCC--cc-----------
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI--HLISDEIYSGTV---FSSPG--FV----------- 244 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~--~iI~Deay~~~~---~~~~~--~~----------- 244 (469)
++....+..+-+||.+-.+..+|.+=+.+++.+|.+.++++|+ ++.+|.||+++. +-... +.
T Consensus 270 ~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~ 349 (608)
T TIGR03811 270 RKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAE 349 (608)
T ss_pred HHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccc
Confidence 8755555455566777778889999887776666666688887 699999999842 11100 00
Q ss_pred -------------chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHH
Q 043923 245 -------------SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAA 295 (469)
Q Consensus 245 -------------s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~ 295 (469)
.....+.. ...-.-+.-.++|.+. ....+|.++..+..+...+
T Consensus 350 ~~~f~~~~~~l~~~~~~~l~g-------le~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~ 405 (608)
T TIGR03811 350 YGVFTEKKEYISREVYNAYKA-------ISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVI 405 (608)
T ss_pred ccccccccccccHhHHHHHhc-------CcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHH
Confidence 01111111 1223334458999875 7789999998777654443
No 374
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.93 E-value=7.7e-07 Score=86.49 Aligned_cols=318 Identities=14% Similarity=0.172 Sum_probs=183.3
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHH--HHHHHh-cCC----CCEEEEccCCCc
Q 043923 77 RELALFQDY---HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANE--TLMFCL-AEP----GEAFLLPTPYYP 146 (469)
Q Consensus 77 ~~~~~Y~~~---~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~--~~~~~l-~~~----gd~Vl~~~P~y~ 146 (469)
..++-|.|. +|+.++...+.+||.+..| .+.=.+-..+|++.=.. +++++. ... .+.+++|+-.|.
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHG 168 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHG 168 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccC
Confidence 344444433 6899999999999998755 22223334455443221 222333 223 368999999998
Q ss_pred ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q 043923 147 GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIH 226 (469)
Q Consensus 147 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~ 226 (469)
.-..++.+. |.+|+.|++++++ .+|+++|++++.+ ++.++.++|||. .|.. .+.+++|+++.+++|..
T Consensus 169 TNPASAam~-G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~ 236 (496)
T COG1003 169 TNPASAAMA-GFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQ 236 (496)
T ss_pred CChhhHhhc-CceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCE
Confidence 887788887 9999999998655 5999999999875 899999999974 4543 57889999999999999
Q ss_pred EEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC----CcceEEEEEecCHHHHHHHH------
Q 043923 227 LISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL----PGFRVGAIYSNDDMVVAAAT------ 296 (469)
Q Consensus 227 iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~----~GlRiG~li~~~~~~~~~~~------ 296 (469)
+..|.|=..-..+-..+ . +-+-.++=--++|+|+. .|-..|=+.. .+.+...+-
T Consensus 237 vY~DGANlNA~vG~~rP-G--------------d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p~~~~ 300 (496)
T COG1003 237 VYYDGANLNAIVGLARP-G--------------DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGPVVYH 300 (496)
T ss_pred EEecCcchhhhhccccc-c--------------ccccceEEeecccccccCCCCCCCCCCceeh-HhhccccCCCCcccC
Confidence 99998875433332111 1 11222333367787743 2344444432 111111110
Q ss_pred ----------------HhcccccCcHHHH--HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC-c
Q 043923 297 ----------------KMSSFGLVSSQTQ--YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSN-A 356 (469)
Q Consensus 297 ----------------~~~~~~~~s~~~q--~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~-~ 356 (469)
+...++...++.. ++-...+. .+-+++.-+.---+..++...|+.. .+.+.+.. -
T Consensus 301 ~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG-----~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~ 375 (496)
T COG1003 301 DVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMG-----ADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRV 375 (496)
T ss_pred CCccccccCCCCccceeeccccCcchHHHHHHHHHHHHh-----HHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcc
Confidence 0111111111111 11112221 2223443333344667888888864 23222221 0
Q ss_pred eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 357 GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
..=+.++......... ....+++++|+ ++|+.. |...|...-.+.+-|=... .+++++++.+++|.++.++-++.
T Consensus 376 ~HE~ild~r~l~~~~G-v~~~DvAKrLl-D~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 376 AHECILDARPLKKETG-VRALDVAKRLL-DYGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred eeEEEeechHhHhhcC-CcHHHHHHHHH-hcCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1112234432211111 33446777777 679875 3444543234556665544 37899999999999998887774
No 375
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.80 E-value=4.8e-07 Score=88.64 Aligned_cols=305 Identities=13% Similarity=0.157 Sum_probs=184.4
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----C-CC---CEEEEccCCCcChHHHHhhhCC
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----E-PG---EAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~-~g---d~Vl~~~P~y~~~~~~~~~~~g 157 (469)
++...+..++.+++..-++.+ +.+.=..|.|+++++..+..... . .| ..++++.-.+..+...+... +
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~---~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf-~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP---SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYF-E 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC---ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhE-E
Confidence 355677777777776665522 22344578999999655554431 1 12 34666666677777767666 9
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEecccccc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-KNIHLISDEIYSGT 236 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-~~~~iI~Deay~~~ 236 (469)
+++..||+++ ++|.+|+..+...+++ ++.+++..-|+-|+|.. |.+++|.++..+ +++.+.+|.+-++|
T Consensus 192 v~l~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgF 261 (491)
T KOG1383|consen 192 VELREVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGF 261 (491)
T ss_pred EEEEeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccc
Confidence 9999999986 7899999999999987 89999999999999987 556668888878 99999999999886
Q ss_pred ccC-CCCccchhhhhhccccccCCcCCeEEEE-ccCccccCCCcceEEEEEecCHHHHHH--HHHh-------cccc-cC
Q 043923 237 VFS-SPGFVSIMEILKDRNCENTQVWNRVHIV-YSLSKDLGLPGFRVGAIYSNDDMVVAA--ATKM-------SSFG-LV 304 (469)
Q Consensus 237 ~~~-~~~~~s~~~~~~~~~~~~~~~~~~~i~i-~S~SK~~g~~GlRiG~li~~~~~~~~~--~~~~-------~~~~-~~ 304 (469)
+-. ........++ ..+.|..+ .+-+| ||+.--.+||++-.++.+... +-.. .++. ..
T Consensus 262 i~p~~~~~~~~fdF----------r~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~Tlng 330 (491)
T KOG1383|consen 262 INPAGYLNEEEFDF----------RVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNG 330 (491)
T ss_pred cccccccCcccccc----------CCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCccccc
Confidence 542 1110111111 11223333 23345 677767789998765544221 1100 1111 01
Q ss_pred c-----HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccCChhHHHH
Q 043923 305 S-----SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEME 378 (469)
Q Consensus 305 s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~ 378 (469)
| ..+|++..--+...+ ..+..+.+.+....|++.+++. ++.+...+.-.|+...-.. .+.-+
T Consensus 331 SR~g~~va~~wa~~~~lG~eG-----Y~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-------~~i~e 398 (491)
T KOG1383|consen 331 SRPGSQVAAQWAALMSLGEEG-----YRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND-------VNIFE 398 (491)
T ss_pred CCcccHHHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc-------cchhh
Confidence 1 233443333333333 3455566777888899999987 6666654332333222221 11223
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhcc
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
...++++.|-.+. +-.|. ..+-+|+.. ..++-.++++.-|.+++++..+
T Consensus 399 -lsd~l~~~GW~ln-alq~P----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 399 -LSDLLRKKGWILN-ALQFP----AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred -hhHHHHhcCcCcc-ccCCC----CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 3445667787764 33332 234445443 2455567888888888877665
No 376
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.5e-06 Score=80.04 Aligned_cols=276 Identities=14% Similarity=0.098 Sum_probs=162.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
..+.+++++++++-.++.++.+.++ +|+.|++++-.-.+....+..- -+++.....+ -...+.++++++++++
T Consensus 91 A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g-~~~~~~~~~~--~~~~~~P~~~~~~~~d-- 165 (407)
T COG3844 91 ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEG-LADLLGIGYD--LEGVIAPRALEEAITD-- 165 (407)
T ss_pred CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcc-hhhhhccccc--ceeeeChHHHHHhhcc--
Confidence 6789999999999999888877643 5888888876433322221110 1111111111 1112456788888876
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.+.+|++++-+.-||+.+. +.+|-.+++++|++++.|-+|+.. .-+ ..+. ..+..+-
T Consensus 166 ----d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaG---avp-~~Lh------------~~gaDfa 222 (407)
T COG3844 166 ----DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAG---AVP-VDLH------------AAGADFA 222 (407)
T ss_pred ----ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccC---Ccc-eeec------------ccCCCee
Confidence 8888888888889999998 555788888999999999999732 211 1211 2356677
Q ss_pred EccCccccC-CCcceEEEEEecCHHHHHHHHHhccc------------------------ccCcHHHHHHHHHHhcCchh
Q 043923 267 VYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSSF------------------------GLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 267 i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~~------------------------~~~s~~~q~~~~~~l~~~~~ 321 (469)
|++--|.++ -||-. +++...++........+..+ ++.+..+..++...|.-..
T Consensus 223 igcsyKYLNgGPGap-a~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa- 300 (407)
T COG3844 223 IGCSYKYLNGGPGAP-AGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFA- 300 (407)
T ss_pred eeeeceeccCCCCCc-eeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhh-
Confidence 888889884 25544 44444333222211111111 1123334444444333211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCC----ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSN----AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP 393 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p 393 (469)
+-.+.+.|++--...+++.+.++.. ++++..|. .|.-+.+..|. ..+.++ .|.++||..-
T Consensus 301 -~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---------~~~V~q-aLi~rGVigD- 368 (407)
T COG3844 301 -DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---------GYQVMQ-ALIDRGVIGD- 368 (407)
T ss_pred -hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---------HHHHHH-HHHHcCcccc-
Confidence 1114555555444556677666643 45554432 23444444442 123444 4557799752
Q ss_pred CCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhh
Q 043923 394 GSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 394 g~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~ 431 (469)
|- .++-+|+.++- ++-.++=.+++.|.+++++.
T Consensus 369 ---~R--~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 369 ---FR--EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ---cc--CCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 22 47789999975 37899999999999999864
No 377
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.77 E-value=6.3e-06 Score=89.75 Aligned_cols=262 Identities=13% Similarity=0.181 Sum_probs=153.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEccCCCcChHHHHh---hhCCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLA---EPGEAFLLPTPYYPGFDRDLK---WRTGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
++..|.-+..+++.+.++++.+.. +++++|++++-.|+.+...++ ...|++++.++. ++++..+
T Consensus 124 m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~ 193 (939)
T TIGR00461 124 LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV 193 (939)
T ss_pred CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC
Confidence 677788888898888887776642 234789999999998876655 223888887742 3344332
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
++.++++.+|+. +|.+. ++++|+++++++|.+++++.--.. ... ..+..++ +
T Consensus 194 --------~~~~v~~q~Pn~-~G~ie---d~~~i~~~~h~~gal~~~~ad~~a--l~l--l~~Pge~------------G 245 (939)
T TIGR00461 194 --------DVFGCLLQYPAT-DGSIL---DYKQLIDALHSHKSLVSVAADLMA--LTL--LTPPGHY------------G 245 (939)
T ss_pred --------CEEEEEEECCCC-CeEEe---cHHHHHHHHHHcCCEEEEEechHH--hCC--cCCHHHc------------C
Confidence 456788888875 88886 477799999999999998543221 111 1122222 3
Q ss_pred eEEEEccCccccCC----CcceEEEEEecCHHHHHH---------------------------HHHhcccccC-cHHHHH
Q 043923 263 RVHIVYSLSKDLGL----PGFRVGAIYSNDDMVVAA---------------------------ATKMSSFGLV-SSQTQY 310 (469)
Q Consensus 263 ~~i~i~S~SK~~g~----~GlRiG~li~~~~~~~~~---------------------------~~~~~~~~~~-s~~~q~ 310 (469)
-.|+++ .+|.||. .|--.|++.+.++..++. +++.....+. +.....
T Consensus 246 aDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~ 324 (939)
T TIGR00461 246 ADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLL 324 (939)
T ss_pred CcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHH
Confidence 445443 3444443 355577776644322221 0000111111 111111
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEE--EEecccccccCChhHHHHHHHHHHHhCC
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFC--WVDMRHLLRSNTFEAEMELWKKIVYDVK 388 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~--~v~~~~~~~~~~~~~~~~l~~~ll~~~G 388 (469)
++.+.+.-..+..+-+++..++...+..++.+.|++.|+++..+ .+|= .++++. .+..++.++++ +.|
T Consensus 325 a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~-------~~~~~i~~~~~-~~g 394 (939)
T TIGR00461 325 ANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVGN-------GISSELLKAAE-EFN 394 (939)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeCC-------CCHHHHHHHHH-HCC
Confidence 11111110011133466667777778888999999999887654 3442 233321 11234566665 569
Q ss_pred eEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHH
Q 043923 389 LNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLK 425 (469)
Q Consensus 389 I~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~ 425 (469)
|.++.. ..+.+++|+... ++++++.+++.+.
T Consensus 395 i~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 395 INLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred Ceeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 997752 245799999874 8999999999885
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.77 E-value=2.6e-06 Score=83.15 Aligned_cols=178 Identities=20% Similarity=0.143 Sum_probs=122.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEE-----EccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFL-----LPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl-----~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
..+.++++|..+.|+..++.++..++..|+ ++ +..+++..+++.. |++++.+-.... ....+++.+|.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~a-G~~l~EvG~tn~----t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLA-GAKLVEVGTTNR----THLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHc-CCEEEEecccCc----CCHHHHHHHhcc
Confidence 468899999999999999999977554443 33 5777788888888 999999975422 367889999986
Q ss_pred HHhcCCceeEEEEecCCC-CCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe
Q 043923 185 AQKRHLKVKGVLVTNPSN-PLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~N-PtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
++++++-..-+| +.=..++.++ ++++|+++|+++++|.+....+- ..+.+..++. .+.
T Consensus 156 ------~ta~llkV~s~~~~f~~~l~~~~---l~~ia~~~~lpvivD~aSg~~v~---~e~~l~~~la---------~Ga 214 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGMLSEEE---LVEIAHEKGLPVIVDLASGALVD---KEPDLREALA---------LGA 214 (395)
T ss_pred ------CCeeEEEEeeccccccccccHHH---HHHHHHHcCCCEEEecCCccccc---cccchhHHHh---------cCC
Confidence 788776655544 3323456555 88888899999999999875321 1123333433 256
Q ss_pred EEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-cc-cccCcHHHHHHHHHHhc
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SS-FGLVSSQTQYLLSALLS 317 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~-~~~~s~~~q~~~~~~l~ 317 (469)
.++++|--|.+ .|.+.|.|++.++.+ ..+++. .. .+.+..+...++.++|+
T Consensus 215 DLV~~SgdKll--gGPqaGii~GkKelI-~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 215 DLVSFSGDKLL--GGPQAGIIVGKKELI-EKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred CEEEEecchhc--CCCccceEechHHHH-HHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 67888999988 577899999965555 333322 11 12355555555555554
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.75 E-value=4.3e-06 Score=81.59 Aligned_cols=299 Identities=14% Similarity=0.130 Sum_probs=156.9
Q ss_pred CCcEEEeCChHH-HHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC-CCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATS-ANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS-LNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~-al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~ 186 (469)
....++++.+|. .+.+.+.++. ..++.|+.+.-.+.....++..+ |.+++.||... .+....|++.+++.+++.
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~A-Gl~~~vV~~~~~~d~l~td~~~ie~~i~~~- 151 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERA-GLEPVVVENVLEGDELITDLEAIEAKIEEL- 151 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHT-T-EEEEE-EEEETTEEEEHHHHHHHHHHHH-
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhc-CCeEEEeeccCCCCeeeccHHHHHHHHHHh-
Confidence 345666666554 3444555553 46788888877655555666666 99999988532 233445688888888653
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++...+.+++.++--.|... +++++|+++|++||+..|+-.||+ ..... .+..+-... ......++
T Consensus 152 --G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYg---vQ~~~--~~~~i~~a~-----~~GRvda~ 217 (389)
T PF05889_consen 152 --GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYG---VQSSK--CMHLIQQAW-----RVGRVDAF 217 (389)
T ss_dssp --CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTT---TT-HH--HHHHHHHHH-----HHSTCSEE
T ss_pred --CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchh---hhHHH--HHHHHHHHH-----hcCCccee
Confidence 44666778887765555553 368889999999999999999997 32221 111111100 01134567
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCc--hhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDK--KFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
+.|.-|.| +-+..-+.+.++++.......+.-+--...++.......++.-+ .| ...+.++.+.+....+.+.+.-
T Consensus 218 vqS~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~-~~ll~~r~~~f~~l~erl~~~a 295 (389)
T PF05889_consen 218 VQSTDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGY-GALLKERKASFPYLKERLKKWA 295 (389)
T ss_dssp EEEHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999 56655566667666555444432211112333333444443322 22 3334444444444444444444
Q ss_pred HhcCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCe---E-EeCCCCCCC-----CCCCeEEEEe-ecCC
Q 043923 345 EKAGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKL---N-ISPGSSCHC-----TEPGWFRVCF-ANMS 413 (469)
Q Consensus 345 ~~~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI---~-v~pg~~f~~-----~~~~~iRi~~-~~~~ 413 (469)
++.+-.+.. |....-+.+.++....... .+. .++-..|...|| . |.|+..+.. ....|+-++- -.++
T Consensus 296 ee~~e~ll~~p~N~is~a~tl~~l~~~~~-k~~-~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~ 373 (389)
T PF05889_consen 296 EEVGERLLETPRNHISMAFTLDTLYEISQ-KDG-TFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMT 373 (389)
T ss_dssp HHTTEEBSSSTT-SSEEEEE-TTCCTCCS-SHH-HHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--
T ss_pred HHhhhhhcCCCCCCeeEEEECccchhhcc-chh-hhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCC
Confidence 445533332 2222344456654322221 222 344444556665 3 333322211 1125777733 2369
Q ss_pred HHHHHHHHHHHHHHHH
Q 043923 414 EDTLKLSMQRLKAFVD 429 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l~ 429 (469)
+||++.++++|+++++
T Consensus 374 ~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 374 REEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 380
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.73 E-value=1.3e-06 Score=80.84 Aligned_cols=193 Identities=19% Similarity=0.224 Sum_probs=128.7
Q ss_pred ccccccCCC-CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-CcChHHH--
Q 043923 76 FRELALFQD-YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-YPGFDRD-- 151 (469)
Q Consensus 76 ~~~~~~Y~~-~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-y~~~~~~-- 151 (469)
+.....|+. .-|.+.|.+..|+-++.... .=..-+ -++|+||..++..+++|||+++...-. |....+.
T Consensus 54 f~~stGYGydD~GRdtLe~vyA~vf~aE~a------~VRpq~-isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG 126 (416)
T COG4100 54 FTGSTGYGYDDLGRDTLERVYAQVFGAEAA------LVRPQI-ISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIG 126 (416)
T ss_pred cCCCCCCCccccchhHHHHHHHHHhccccc------eeeeee-ecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhc
Confidence 344455542 24777788888887762110 011223 356789999999999999998866543 5444433
Q ss_pred --------HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCC-CCCCCCCCHHHHHHHHHHHHh
Q 043923 152 --------LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 152 --------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~~~s~e~l~~l~~~~~~ 222 (469)
++.. |+....+|+..++ .+|.+.+..++++ ++|+|-+.... .-.--.++.+++++++++.++
T Consensus 127 ~rg~~~gSL~df-gi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~ 197 (416)
T COG4100 127 LRGEGQGSLKDF-GIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKE 197 (416)
T ss_pred cCCCCcccHHHh-CcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHh
Confidence 3334 7888889987544 6899999999986 89988776431 111224789999999999987
Q ss_pred c--CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcce--EEEEEecCHHHHHHHHHh
Q 043923 223 K--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFR--VGAIYSNDDMVVAAATKM 298 (469)
Q Consensus 223 ~--~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR--iG~li~~~~~~~~~~~~~ 298 (469)
- ++++++|.+|.+++-..++ . .-+..+..+|+-|.-| .|+- -||+.+.++.+.++.-++
T Consensus 198 inpn~ivFVDNCYGEFvE~~EP--t--------------~vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~yRl 260 (416)
T COG4100 198 INPNVIVFVDNCYGEFVEEKEP--T--------------HVGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAAYRL 260 (416)
T ss_pred cCCCEEEEEeccchhhhhccCc--c--------------ccchhhhccceeeCCC-CceeeccceeechHHHHHhhceee
Confidence 5 7999999999996433332 1 1244566788888776 4432 279998777776665555
Q ss_pred ccc
Q 043923 299 SSF 301 (469)
Q Consensus 299 ~~~ 301 (469)
..+
T Consensus 261 TaP 263 (416)
T COG4100 261 TAP 263 (416)
T ss_pred ecC
Confidence 444
No 381
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.72 E-value=3.4e-06 Score=78.10 Aligned_cols=293 Identities=14% Similarity=0.176 Sum_probs=164.4
Q ss_pred CCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHHH-hhh-----CC-----CEEEE-eecc--CCCCcc-
Q 043923 111 TSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRDL-KWR-----TG-----VEIVP-IQCT--SLNGFQ- 172 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~~-~~~-----~g-----~~~~~-v~~~--~~~~~~- 172 (469)
-+-++++|+++||..++++.. .+..| |++.+-.|.++.... ... .| -+.+. .|++ ..+.|.
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 456789999999999988774 44556 455555665543221 110 01 11111 1211 011111
Q ss_pred ----------cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCH-HHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 173 ----------ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSR-NELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 173 ----------~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~-e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.=.+.+++.+++...++.++.+.+-.+-+.-.|+++|+ .-.+++++..+.+|.+.|.||+..++.--+.
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~ 260 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS 260 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch
Confidence 11255667777666666666655544446667776655 4678899999999999999999987422233
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-----hcccccCcHHHHHHHHHH-
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-----MSSFGLVSSQTQYLLSAL- 315 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~- 315 (469)
.+.+..- ++-+--+-++.|.+| .|-.++.++. .+.+.+++.. +.+++ .++.+-+++.+.
T Consensus 261 hyWafq~------------y~fiPDIVtmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNTyG-GnPVsCAv~laVm 325 (452)
T KOG1403|consen 261 HYWAFQT------------YNFIPDIVTMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNTYG-GNPVSCAVGLAVM 325 (452)
T ss_pred hhhhhhh------------hccccchheecccCC-CCCeeeEEec-cHHHHHHhccccceehhccC-CCchhHHHHHHHH
Confidence 3222211 122222347889999 9999999998 5667766643 23344 455555544444
Q ss_pred --hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceec--CCceEEEEEeccccc--ccCChhHHHHHHHHHHHhC
Q 043923 316 --LSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GISCLK--SNAGLFCWVDMRHLL--RSNTFEAEMELWKKIVYDV 387 (469)
Q Consensus 316 --l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~--~~~g~~~~v~~~~~~--~~~~~~~~~~l~~~ll~~~ 387 (469)
++++++ +++.++.- +.|...|+++ ..++++ ...|+|+-+++-..- +..+.....-+..++-+.+
T Consensus 326 ~v~e~E~L-q~ha~~vG-------~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y 397 (452)
T KOG1403|consen 326 RVCEDENL-QEHAQQVG-------EKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELY 397 (452)
T ss_pred HHHhhhhH-HHHHHHHH-------HHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhh
Confidence 444443 33333333 2233333332 223333 234689988875432 2223344445566777778
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 388 KLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 388 GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
||++..-. +..+-+.|-..- .++++.++.+..|.+++--.
T Consensus 398 ~VLlsaDG----Ph~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 398 RVLLSADG----PHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred hEEEecCC----CCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 89886321 123445553321 37788888888887776433
No 382
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.61 E-value=6.2e-05 Score=73.97 Aligned_cols=313 Identities=13% Similarity=0.199 Sum_probs=171.9
Q ss_pred CCcHHHHHHHHHHHHhHcCCCC-----CC-CCCcEEEeCChHHHHHHHHHHh-------cCCC-----------C-EEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKV-----TF-DTSKIVLTAGATSANETLMFCL-------AEPG-----------E-AFLL 140 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~-----~~-~~~~i~~t~G~~~al~~~~~~l-------~~~g-----------d-~Vl~ 140 (469)
+...+|+..+.+|+++..+... .. +.-.|+.++ ++++..+++.+. .+.+ + .+..
T Consensus 109 Pa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~t-ases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 109 PACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGT-ASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred cchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecC-cchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 4468899999999988755221 00 122344444 344444444332 1122 2 3455
Q ss_pred ccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHH
Q 043923 141 PTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNII 220 (469)
Q Consensus 141 ~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~ 220 (469)
.+-++.+...++... |+++..++.+. +|.++.+.|.++|++-..+|--+ .+++.+-. -||. -..+++.+|..+|
T Consensus 188 SDqahssveka~~i~-~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~G-TT~~-ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIA-GVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATLG-TTSS-CAFDELEELGPVC 261 (511)
T ss_pred cCcccchHHHhHhhc-ceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEeec-Cccc-cccccHHHhcchh
Confidence 666788888777666 99999999874 89999999999998755444333 33333222 2333 3567899999999
Q ss_pred HhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEec-----------CH
Q 043923 221 TEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSN-----------DD 289 (469)
Q Consensus 221 ~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~-----------~~ 289 (469)
+++|+++.+|.+|++..|--+.+..+..-++ ...-+-...||++ +.-.-+..+... ++
T Consensus 262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie----------~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIE----------YADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred hhcCEEEEeehhhccccccCHHHHHHhhcch----------hhccccCChhhee-EEeeeeecceeecCceeeeeeecCh
Confidence 9999999999999976555443333222111 1111122334433 222222222221 22
Q ss_pred HHHHHHHH--hccc--ccC------cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceecC
Q 043923 290 MVVAAATK--MSSF--GLV------SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-----GISCLKS 354 (469)
Q Consensus 290 ~~~~~~~~--~~~~--~~~------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g~~v~~~ 354 (469)
...+.... ...+ |.+ -++-.+...+.+.-..+ ++++ ++ .-.|.+.++++ .+++..+
T Consensus 331 ~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~l-q~~i-------R~-h~~La~~fe~lv~~d~~FE~~~~ 401 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENL-QNYI-------RE-HVRLAKEFETLVRADPRFEIVNK 401 (511)
T ss_pred HhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHH-HHHH-------HH-HHHHHHHHHHHhhcCCcceeecc
Confidence 21111110 1111 111 12223333333322221 2222 21 12233333332 3555444
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHHHHHHHHHHHhhc
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~l~~L~~~l~~~~ 432 (469)
..==.+++++++.. +....+..++.....|.+.|.+.- +.-.+|++++.. ++++++++.+.|.+......
T Consensus 402 ~~lgLvcFRlk~~N-----~~ne~Ll~~in~~g~i~l~~~~l~---gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 402 RILGLVCFRLKGDN-----EINEALLNRLNSSGRIHLVPASLH---GKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred cccceeEEeecCCc-----HHHHHHHHHHHhcCcEEEEEeeec---ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33124556766431 334567888887878999887642 345799999773 88999999999998877654
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
.
T Consensus 474 ~ 474 (511)
T KOG0628|consen 474 E 474 (511)
T ss_pred h
Confidence 4
No 383
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.57 E-value=4.1e-05 Score=73.01 Aligned_cols=284 Identities=15% Similarity=0.149 Sum_probs=161.7
Q ss_pred CCCC----cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh-HHHHhhhCCCEE---------EEeeccCCCCcccC
Q 043923 109 FDTS----KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF-DRDLKWRTGVEI---------VPIQCTSLNGFQIT 174 (469)
Q Consensus 109 ~~~~----~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~~~~~~g~~~---------~~v~~~~~~~~~~d 174 (469)
++|+ +|-.-+| +.|...+..+++.|++.|+-.+--..++ .+....- +.++ .++.+++..+ -+|
T Consensus 101 ldp~kWGVNVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~-~kkISa~SiyFeSmPYkv~~~TG-~ID 177 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTP-TKKISATSIYFESMPYKVDPSTG-YID 177 (477)
T ss_pred CCHHHCceeeccCCC-CchhhHHHhhhcCCCCeeeeccCCCCCccccccccC-CceeeeeeeecccCceeeCCCCC-cee
Confidence 5665 3444455 4566778889999999888544322221 1111111 1111 1233455444 479
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
.|.|++.-..+ ++++||.... -.-..++... +-++|.+.|++++.|-+|....-...-.++.+++
T Consensus 178 YD~Le~~A~~f-----rPk~iiaG~S--aY~R~~DYaR---~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----- 242 (477)
T KOG2467|consen 178 YDKLEKTATLF-----RPKLIIAGTS--AYSRLIDYAR---FRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----- 242 (477)
T ss_pred hHHHHHHHHhc-----CCcEEEeccc--cchhhccHHH---HHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-----
Confidence 99999887765 8886554311 1223445455 4555558899999999996433333333444444
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecC-----------H---HHHHHHHHhcc---cccCcHHHHHHHHHHhc
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSND-----------D---MVVAAATKMSS---FGLVSSQTQYLLSALLS 317 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~-----------~---~~~~~~~~~~~---~~~~s~~~q~~~~~~l~ 317 (469)
..|+..|.+|++ -|-|-|.|.-.. . .+.+.++..-- .+.+......+++.+|.
T Consensus 243 --------~DiVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALk 312 (477)
T KOG2467|consen 243 --------CDIVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALK 312 (477)
T ss_pred --------cceeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHH
Confidence 357788999986 788888886432 0 12222221110 11122222333333333
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee-cCCceEEEEEeccc-ccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL-KSNAGLFCWVDMRH-LLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~~g~~~~v~~~~-~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
... ....+.-.+++.++.+.|.+.|.+.|.+.. .......+.+++.. +.+. ..+++.++..+|.+.--.
T Consensus 313 Qa~--tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dG-------arvE~vle~~~I~~NKNt 383 (477)
T KOG2467|consen 313 QAM--TPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDG-------ARVEKVLELCHIALNKNT 383 (477)
T ss_pred hhC--CHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCch-------HHHHHHHHHhhhhhcCCc
Confidence 221 111345566677788999999999998865 34445677788864 2222 245666666677765333
Q ss_pred CCCC---CCCCeEEEEeec-----CCHHHHHHHHHHHHHHHH
Q 043923 396 SCHC---TEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 396 ~f~~---~~~~~iRi~~~~-----~~~e~i~~~l~~L~~~l~ 429 (469)
.++. ..++.+||.... ..++++++..+-|.++++
T Consensus 384 vpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 384 VPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 3332 236789997633 356888888777776654
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.56 E-value=1e-05 Score=80.81 Aligned_cols=286 Identities=18% Similarity=0.245 Sum_probs=143.0
Q ss_pred ccCCCCC-----CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHH
Q 043923 80 ALFQDYH-----GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRD 151 (469)
Q Consensus 80 ~~Y~~~~-----g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~ 151 (469)
..|.|++ |..+..-.....+.+..| ++..+.-+-.|++.+-+.+..+. .+.+++|+++.-.|+.+...
T Consensus 95 TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTG----mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v 170 (429)
T PF02347_consen 95 TAYTPYQPEISQGRLQALFEYQSMICELTG----MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV 170 (429)
T ss_dssp CS-STTSGGGBHHHHHHHHHHHHHHHHHHT----SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHhhC----CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH
Confidence 4566643 444433334444444433 44455567777777766665554 23346999999999988775
Q ss_pred Hhhh---CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 152 LKWR---TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 152 ~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
++.. .|++++.++.+..+. .| +.++.+|++.+||. .|.+-+ ++++.++++++|.+++
T Consensus 171 ~~t~a~~~g~~iv~~~~~~~~~--~d--------------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~ 230 (429)
T PF02347_consen 171 LRTYAAPLGIEIVEVPLDEDGT--TD--------------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVI 230 (429)
T ss_dssp HHHHCCHCCEEEEEE-BBTTCS--B---------------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEE
T ss_pred HHHhhhhCCeEEEEecccccCC--cc--------------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEE
Confidence 4432 399999999875332 22 12899999999985 788755 7779999999999888
Q ss_pred EeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC----CcceEEEEEecCHHHHHH----------
Q 043923 229 SDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL----PGFRVGAIYSNDDMVVAA---------- 294 (469)
Q Consensus 229 ~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~----~GlRiG~li~~~~~~~~~---------- 294 (469)
+ .+--- .... ..+.. ..+-.|++++ +|.||. .|--.|++.+.+..+++.
T Consensus 231 ~-~ad~~-aL~~--l~~Pg------------e~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D 293 (429)
T PF02347_consen 231 V-GADPN-ALGG--LKSPG------------EYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKD 293 (429)
T ss_dssp E-CGGCC-GCCT--C--GG------------GGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEB
T ss_pred E-ecCHH-HHhC--cCChh------------hcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccccc
Confidence 6 33321 1111 12222 2245566655 676653 466678887754432221
Q ss_pred -----------------HHHhc--ccccCcHHHH-HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 295 -----------------ATKMS--SFGLVSSQTQ-YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 295 -----------------~~~~~--~~~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
+++-+ +..+.+.... .++..++.. +..+-+++..+....+..++.+.|.+. +..+.
T Consensus 294 ~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~--~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~- 370 (429)
T PF02347_consen 294 ADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAY--LGPEGLREIAERIHLNAHYLAERLKKIYGLPFD- 370 (429)
T ss_dssp CCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS-
T ss_pred ccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-
Confidence 11111 1111222221 122222222 225557888888888999999999986 33332
Q ss_pred CCceEE--EEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHH
Q 043923 354 SNAGLF--CWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRL 424 (469)
Q Consensus 354 ~~~g~~--~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L 424 (469)
..-|| +....+. ....++.++.. ..|+... ....+.+-+|+... ++++|+.+++.+
T Consensus 371 -~~~f~e~v~~~~~~-------~~~~~l~~~~~-~~gl~~~------~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 371 -NPFFFEFVVVFSKD-------KEVEELLKRGI-EGGLNLR------YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -SSSBSSEEEEESS--------HHHHHHHHTT-----EEEG------GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred -CCCceeeeeecCCc-------HHHHHHHHHHH-hcCCCcc------ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 22232 3222221 11112333333 3354332 12345788998774 889999988764
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.47 E-value=0.00031 Score=68.77 Aligned_cols=269 Identities=17% Similarity=0.203 Sum_probs=157.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEccCCCcChHHHHhhh---CCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLA---EPGEAFLLPTPYYPGFDRDLKWR---TGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
++..|--+-.++|.+-++++.+.. .+..+++++.-+|+.+...++.. .|++++.++.+ |++.++++
T Consensus 135 m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~- 206 (450)
T COG0403 135 LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA- 206 (450)
T ss_pred CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-
Confidence 556666777888887777776653 23589999999999998887643 26777776654 56667766
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec-cccccccCCCCccchhhhhhccccccCCcC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE-IYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De-ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
.+ ..+.++++.+|+ -.|. ..++++++++.++++|.++++=. .-+ +.-- .+. +..
T Consensus 207 ~~-----~~~~gv~vQyP~-~~G~--~~~d~~~l~~~~h~~~al~~v~aDpla---L~LL--~pP------------Ge~ 261 (450)
T COG0403 207 DD-----GDVFGVLVQYPN-TFGI--VEEDLRALIEAAHSAGALVIVAADPLA---LGLL--KPP------------GEF 261 (450)
T ss_pred cc-----cCeEEEEEecCC-CCCc--cchhHHHHHHHHhhcCCEEEEEechhH---hhcc--CCc------------ccc
Confidence 32 277889999887 4663 33468889999999988776522 111 1100 111 133
Q ss_pred CeEEEEccCc---cccCCCcceEEEEEecCHHHHH---------------------------HHHHhc--ccccCcHHHH
Q 043923 262 NRVHIVYSLS---KDLGLPGFRVGAIYSNDDMVVA---------------------------AATKMS--SFGLVSSQTQ 309 (469)
Q Consensus 262 ~~~i~i~S~S---K~~g~~GlRiG~li~~~~~~~~---------------------------~~~~~~--~~~~~s~~~q 309 (469)
+-.|++++.. =-+|+.|-.+||..+.++..++ .+++-+ +..+.+....
T Consensus 262 GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLl 341 (450)
T COG0403 262 GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALL 341 (450)
T ss_pred CCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHH
Confidence 5667777653 3455667788888774443222 111111 1111122111
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceecCCceEEE--EEecccccccCChhHHHHHHHHHHH
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GISCLKSNAGLFC--WVDMRHLLRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~~~~g~~~--~v~~~~~~~~~~~~~~~~l~~~ll~ 385 (469)
+.++++.. .-+..+-+++...+..+...++.+.|++. |+++... .||- .++++. .....+.++..
T Consensus 342 A~~As~y~-~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~-------~~~~~l~~~~~- 410 (450)
T COG0403 342 ALAASMYA-VYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPE-------EVAEALLAAAI- 410 (450)
T ss_pred HHHHHHHH-HHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecch-------hHHHHHHHHHH-
Confidence 11111111 11124456777778888889999999965 5666544 4553 344442 11123334433
Q ss_pred hCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHHHH
Q 043923 386 DVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLKAF 427 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~ 427 (469)
..|+.++.-. +..+=+++... ++++++.+++.+...
T Consensus 411 ~~G~~L~~~~------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 411 AGGINLRRVD------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hcCCceeeec------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4588776322 33566777653 788998888887654
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.43 E-value=0.0001 Score=71.70 Aligned_cols=294 Identities=14% Similarity=0.170 Sum_probs=160.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CC-----C-----CEEEEc-cCCCcChHHHHhhhCC---CEEEEeeccCCCCcccC
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EP-----G-----EAFLLP-TPYYPGFDRDLKWRTG---VEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~-----g-----d~Vl~~-~P~y~~~~~~~~~~~g---~~~~~v~~~~~~~~~~d 174 (469)
.|.|+--.|+...++++.-+=- -| | +-|+.. +-+|.++..++... | -.++.|+.++.+ .++
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~l-g~gtd~c~~v~t~e~G--km~ 236 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFL-GLGTDHCIKVKTDERG--KMI 236 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHh-ccCCceeEEecccccC--ccc
Confidence 4666665666666665543310 11 1 334433 44566677777776 7 678888888655 689
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccc
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRN 254 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~ 254 (469)
+++||+.|-+...++..+-.|-.+.-....|..= ++..++++|++|++++.+|.||.+..+-...+.....-
T Consensus 237 ~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD---dL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~G----- 308 (510)
T KOG0629|consen 237 PDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD---DLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTG----- 308 (510)
T ss_pred hHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC---cHHHHHHHHHhcCEEEEeecccccccccChhhHhhccC-----
Confidence 9999999976554443343333332344556664 47779999999999999999998743322222221111
Q ss_pred cccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc---------cc-------------c-cCcHHHHHH
Q 043923 255 CENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS---------SF-------------G-LVSSQTQYL 311 (469)
Q Consensus 255 ~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~---------~~-------------~-~~s~~~q~~ 311 (469)
....--+.++.+|.+| +.+.++.++...+-+.+.-+++. .+ + .+..+-.+.
T Consensus 309 -----iera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWl 382 (510)
T KOG0629|consen 309 -----IERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWL 382 (510)
T ss_pred -----ccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHH
Confidence 1122345578999999 77888877765443322111110 00 0 111222222
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-eec--CCceEEEEEecccccccCCh--hHHH-------H
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI-S-CLK--SNAGLFCWVDMRHLLRSNTF--EAEM-------E 378 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~-~-v~~--~~~g~~~~v~~~~~~~~~~~--~~~~-------~ 378 (469)
.-.+=.... .++..+..-+..+++.+.+++.+. . +.. |+..++.+--+|...+.... +... .
T Consensus 383 mwkaKG~~G-----fe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPk 457 (510)
T KOG0629|consen 383 MWKAKGTQG-----FEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPK 457 (510)
T ss_pred HHHhccccc-----HHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcH
Confidence 222212222 355666777788999999998742 2 222 44333332233332222110 1110 1
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHHHHHHHHHH
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLSMQRLKAFV 428 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~l~~L~~~l 428 (469)
+-..+++ .|-... |.......++++|+.++.. +.++++-+++.|..+-
T Consensus 458 IK~~Mm~-~Gt~Mi-~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 458 IKERMMK-KGTTMI-GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred HHHHHHh-ccceee-EecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 1123333 354443 1111112467999999763 7889999998887653
No 387
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.35 E-value=5.9e-05 Score=71.61 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcc
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDR 253 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~ 253 (469)
++++++.|.++.++...+.++|+.--+.-.|. ..|++-.+.|-++|++|++.+|+||+..+..-.+ .+...-.+ . +
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG-k~WaHehw-~-l 331 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG-KFWAHEHW-N-L 331 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC-ceeeehhc-C-C
Confidence 57778888777666556666665533565664 6799999999999999999999999996532111 11111111 0 0
Q ss_pred ccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-HHHHhcccccCcHHHHHH---HHHHhcCchhhHHHHHHH
Q 043923 254 NCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKMSSFGLVSSQTQYL---LSALLSDKKFTQNYISEN 329 (469)
Q Consensus 254 ~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~-~~~~~~~~~~~s~~~q~~---~~~~l~~~~~~~~~~~~~ 329 (469)
+.+..++ +|||-|- .| ||... +..... ..+.+.+ |+..+.-... +...+++.++
T Consensus 332 -----~~PpD~v---TFSKK~q-~g---Gffh~-~~frpn~pYrifNT-WmGdP~k~lll~~vv~~I~~~~L-------- 389 (484)
T KOG1405|consen 332 -----DSPPDVV---TFSKKFQ-TG---GFFHD-EEFRPNEPYRIFNT-WMGDPSKNLLLEEVVQEIKREDL-------- 389 (484)
T ss_pred -----CCCccce---ehhhhhh-cC---ccccC-cccCCCchHHHhhh-hcCChHHHHHHHHHHHHHhHHHH--------
Confidence 1223333 8999994 65 66654 222222 2222333 3333322222 3333333332
Q ss_pred HHHHHHHHHHHHHHHHhc----C--CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 330 KKRLKQRHRKLVSGLEKA----G--ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~----g--~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
....+..-+.|...|.++ + +.-.... |-|+.++++..... ..++ .+++-+||.+--+ +..
T Consensus 390 l~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~~R------dk~i-~~~~~nGv~~GGC------g~~ 455 (484)
T KOG1405|consen 390 LNNVAHVGKALLKGLLELQAKYPGKINNLRGR-GTFIAWDCPSGSIR------DKLI-LIARLNGVNLGGC------GDK 455 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchhhhccccc-ceEEEEeCCChHHH------HHHH-HHHHHcCceeccc------ccc
Confidence 222233334455555443 1 2222233 56888888864221 1333 4456678877422 244
Q ss_pred eEEEEeecC-CHHHHHHHHHHHHHHHHh
Q 043923 404 WFRVCFANM-SEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 404 ~iRi~~~~~-~~e~i~~~l~~L~~~l~~ 430 (469)
.+|+-.+.+ .+...+-.++++.+.+..
T Consensus 456 siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 456 SIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 588877664 888899999999888764
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.28 E-value=1.1e-06 Score=85.10 Aligned_cols=213 Identities=20% Similarity=0.193 Sum_probs=45.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC------hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG------FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
..+..+++|+...|+.+++.++. +|..|++..-.-.. +...++.. |++++.|-..+. -.+++++++|+
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~s-Ga~lvEVGttN~----t~~~Dye~AI~ 134 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQS-GARLVEVGTTNR----THLSDYEKAIT 134 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-cccccccccccccccccccccccccccc-cccccccccccc----ccccccccccc
Confidence 36778888888899998888885 45556655432211 33456656 999999886532 35788999998
Q ss_pred HHHhcCCceeEEEEecCCCCC--CCCCCHHHHHHHHHHHHhcCeEEEEeccccccc----cCCCCccchhhhhhcccccc
Q 043923 184 LAQKRHLKVKGVLVTNPSNPL--GTTMSRNELNLLVNIITEKNIHLISDEIYSGTV----FSSPGFVSIMEILKDRNCEN 257 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPt--G~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~----~~~~~~~s~~~~~~~~~~~~ 257 (469)
+ ++.+++..+++|-. |.. ..-.++++++++++|++++|+|-.-+.+. |+-+.-+++...+.
T Consensus 135 e------~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~------ 201 (367)
T PF03841_consen 135 E------NTAALLKVHTSNFRIQGFT-GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA------ 201 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC------
T ss_pred c------ccccccccccccccccccc-ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh------
Confidence 7 89999888888753 211 11146668889999999999998774321 11111234444432
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCc---hh------hHHHH
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDK---KF------TQNYI 326 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~---~~------~~~~~ 326 (469)
.+..+++.|-.|.+| |-..|.|++..+ +.+.+++-. -...+.-....++.+.|... +. ..+.+
T Consensus 202 ---~GaDlV~fSGdKlLG--GPQaGiI~Gkk~-lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml 275 (367)
T PF03841_consen 202 ---AGADLVTFSGDKLLG--GPQAGIIVGKKE-LIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRML 275 (367)
T ss_dssp ---CT-SEEEEETTSSSS--S-S-EEEEEEHH-HHHHHHHHHHTTT-B--HHHHHHHHHHHHH-----------------
T ss_pred ---cCCCEEEEECCCcCC--CCCeEEEEeCHH-HHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence 356788889999985 556899999544 444444321 11225555555544444321 00 12223
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 043923 327 SENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~ 347 (469)
....+.++++.+.|...|...
T Consensus 276 ~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 276 TQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp ---------------------
T ss_pred ccccccccccccccccccccc
Confidence 444455666666666666543
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.03 E-value=0.0011 Score=72.22 Aligned_cols=262 Identities=16% Similarity=0.139 Sum_probs=144.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEccCCCcChHHHHhhh---CCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLA---EPGEAFLLPTPYYPGFDRDLKWR---TGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
++..|--+-.|++.+-+.++.+.. ....+|+++.-.++.+...++.. .|++++. +++++.+
T Consensus 139 m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~ 205 (954)
T PRK12566 139 LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLA 205 (954)
T ss_pred chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcC
Confidence 344455555566655554443332 12468999999999887766543 2666653 2223322
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
.+ ++.+|++.+|+. .|.+- +++++++++++.|.++|+ .+.- +-+.-- .+.. ..+
T Consensus 206 ~~------~~~~v~vq~P~~-~G~i~---d~~~i~~~~h~~gal~~~-~~d~-laL~ll--~~Pg------------e~G 259 (954)
T PRK12566 206 AH------AVFGALLQYPDT-HGEIR---DLRPLIDQLHGQQALACV-AADL-LSLLVL--TPPG------------ELG 259 (954)
T ss_pred CC------CEEEEEEECCCC-ceEEc---cHHHHHHHHHHcCCEEEE-EeCH-HHHhCC--CChh------------hcC
Confidence 22 678889999974 78874 577799999999887663 2221 001111 1111 335
Q ss_pred eEEEEc---cCccccCCCcceEEEEEecCHHHHHH---------------------------HHHhc--ccccCcHHHHH
Q 043923 263 RVHIVY---SLSKDLGLPGFRVGAIYSNDDMVVAA---------------------------ATKMS--SFGLVSSQTQY 310 (469)
Q Consensus 263 ~~i~i~---S~SK~~g~~GlRiG~li~~~~~~~~~---------------------------~~~~~--~~~~~s~~~q~ 310 (469)
-.|+++ +|+=-+|+.|--.||+.+.++..++. +++-+ +..+.+....+
T Consensus 260 ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A 339 (954)
T PRK12566 260 ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLA 339 (954)
T ss_pred CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHH
Confidence 556665 44455556677788888754433221 10001 11111111111
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
.++++... -+..+-+++..++...+..+|.+.|.+.|+++... .||=-+.+.-.. ...++.+..+ +.||-
T Consensus 340 ~~a~~Y~~-~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~------~~~~~~~~a~-~~~~n 409 (954)
T PRK12566 340 NIAGFYAV-YHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG------AQAAIIESAE-AARIN 409 (954)
T ss_pred HHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC------CHHHHHHHHH-HCCCe
Confidence 11111111 11133456666777778889999999989876543 355433333110 1224455544 55888
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 391 ISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
++-- +++.+.||+.. .+.++++.++..+.
T Consensus 410 ~r~~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 410 LRIL------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred eEEe------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 7732 23568888866 48899998888885
No 390
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.82 E-value=0.01 Score=57.37 Aligned_cols=332 Identities=14% Similarity=0.113 Sum_probs=172.4
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
.+.+||.|...+|++.+.++-+..-.- .-.|.+.++-.++ .+-..++-+...+.+++.++ ++-+.+-+++-.
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~---~g~g~svme~SHR---sk~~~~v~~~a~~~lreLl~--iPd~Y~VlflqG 76 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDW---NGLGMSVMEISHR---SKEFKNVLEEAEKDLRELLN--IPDDYKVLFLQG 76 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhh---ccCCcceeeeccc---cHHHHHHHHHHHHHHHHHhC--CCCCceEEEEcC
Confidence 457899998888887666655442111 0011122222222 11224444444555555544 333333455566
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-HhhhCCC--EEEEeeccCCCCcc--cCHHHHHHHHHHHHhcCCcee
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-LKWRTGV--EIVPIQCTSLNGFQ--ITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-~~~~~g~--~~~~v~~~~~~~~~--~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++.....+...|+..+.+-.+..-.|..+... ++.. +. .+..... ...+|. ++++... +.+ +..
T Consensus 77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~-~~~~~~~~~~~-~~~~~~~iP~~~~~~--~~~------~~a 146 (365)
T COG1932 77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKV-GKQPKLIDARI-EEAGYGSIPDLSKWD--FSD------NDA 146 (365)
T ss_pred ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHh-cccccccccce-eccCccCCCChhhcc--cCC------Ccc
Confidence 689999999999876654313334445444322 2223 32 2222221 122222 3333332 111 233
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
.|.+|.-..-+|.-++... .+.. +.++|.|-...- +..+ .... .-.++..+.-|.
T Consensus 147 yv~~~~NeTi~Gv~v~~~p--~~~~-----~~~~v~D~SS~i--lsr~--iDvs--------------k~dviyagaQKn 201 (365)
T COG1932 147 YVHFCWNETISGVEVPELP--DIGS-----DGLLVADASSAI--LSRP--IDVS--------------KYDVIYAGAQKN 201 (365)
T ss_pred EEEEecCCcccceEccCCC--CCCC-----CceEEEecccHH--hcCC--CChh--------------HcceEEEehhhc
Confidence 4666633345687766211 1111 267888876542 2221 2222 233556789999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHH--------------hcccccCcHHHHHHHHH---Hh-cCchhhHHHHHHHHHHHHH
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATK--------------MSSFGLVSSQTQYLLSA---LL-SDKKFTQNYISENKKRLKQ 335 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~~~---~l-~~~~~~~~~~~~~~~~l~~ 335 (469)
+|-.| ++.++.+++.+...-.. -+.+.+++.++.+.+.. ++ ..+. ++...++-++
T Consensus 202 lGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG-----l~~~~~rn~~ 274 (365)
T COG1932 202 LGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG-----LEALEARNQA 274 (365)
T ss_pred cCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHH
Confidence 99888 88888866554332111 01233344444443322 22 2333 3555566667
Q ss_pred HHHHHHHHHHhcCCc---ee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 336 RHRKLVSGLEKAGIS---CL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 336 ~~~~l~~~L~~~g~~---v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
+.+.|.+.+.+.++- +. ...+-+-+.+.+... +-+..+++.+ +++|+...-|.. ..+.+|+++..
T Consensus 275 ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~------~ld~~fv~ea-e~~gl~~lkGhr----~vgGmRasiyn 343 (365)
T COG1932 275 KAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA------ELDKGFVAEA-EAAGLIYLKGHR----SVGGLRASIYN 343 (365)
T ss_pred HHHHHHHHHHhCCccccccchhhccceeEEEEcCcH------HHHHHHHHHH-HHcCCceecccc----CCCceeeeeec
Confidence 778888888876542 21 223445666666521 2233445544 456777766632 23449999976
Q ss_pred -CCHHHHHHHHHHHHHHHHhh
Q 043923 412 -MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 412 -~~~e~i~~~l~~L~~~l~~~ 431 (469)
++.++++.+++-++.+.++.
T Consensus 344 A~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 344 AVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 68888888888887776653
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.71 E-value=0.0014 Score=60.14 Aligned_cols=307 Identities=17% Similarity=0.201 Sum_probs=150.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCC-CEEEEccCCCcChHHHHhhhCCCEEEEee-ccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLA--EPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQ-CTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~--~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~-~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
..++++.--+-..+.+.+..+. +|. +.|+-+.-.-......+-.+ |.+++-+. +.+.+...-|++.++..+++.
T Consensus 76 ~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~a-gfepiiie~i~d~d~l~tdleav~~~iee~- 153 (432)
T KOG3843|consen 76 ANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHA-GFEPIIIENILDGDELITDLEAVEAIIEEL- 153 (432)
T ss_pred hceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhc-CCCceeeeccccchHHHHhHHHHHHHHHHh-
Confidence 4455544444445666666664 333 33443332222233334445 88876554 223334556788888888764
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
...-|+........=..-+++.+++|+.+|..|++.-|+..+|+ ..... .+..+...-. -....-+
T Consensus 154 ----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayg---lqsee--~i~~iaa~~~-----~grida~ 219 (432)
T KOG3843|consen 154 ----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG---LQSEE--CIHKIAAAAE-----CGRIDAF 219 (432)
T ss_pred ----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccc---cchHH--HHHHHHHHhh-----hccHHHH
Confidence 33322222111111122367889999999999999999999997 33332 2222221100 1123456
Q ss_pred EccCccccCCCcceEE-EEEe-cCHHHHHHHHHhcccccCcHHHHHHHHHHhcCc--hhhHHHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVG-AIYS-NDDMVVAAATKMSSFGLVSSQTQYLLSALLSDK--KFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG-~li~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
+.|+-|.|-.| +| .+++ -++..++.+.++-+-...++++...+..+|..+ .+ .+.+.++.+.+.+.+..+..
T Consensus 220 vqsldknf~vp---vggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f-~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 220 VQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAF-KELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred HHHhhhcceee---cchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHH-HHHHHHHHHHHHHHHHHHHH
Confidence 78999999544 33 3333 233344444443332224445555555555433 23 34444555555555555554
Q ss_pred HHHhcCCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCe---EEeCCCCC------------CCCC----C
Q 043923 343 GLEKAGISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKL---NISPGSSC------------HCTE----P 402 (469)
Q Consensus 343 ~L~~~g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI---~v~pg~~f------------~~~~----~ 402 (469)
.-+..|--++ .|+.-.-+...++.....+ +....++-.+|-..|| .|.|.... +... -
T Consensus 296 ~ae~~~e~l~~~p~n~is~amtl~ti~~~k--~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~ 373 (432)
T KOG3843|consen 296 FAEAIGECLLETPENEISLAMTLKTIDEAK--DKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHC 373 (432)
T ss_pred HHHHhhhhhhcCCCchhhhhhhhccCChHH--hhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCch
Confidence 4444442221 1222111112222111111 1122344444444454 45553322 1110 1
Q ss_pred CeEEEEee-cCCHHHHHHHHHHHHHHHHhhcccccccc
Q 043923 403 GWFRVCFA-NMSEDTLKLSMQRLKAFVDSITTTLHNQS 439 (469)
Q Consensus 403 ~~iRi~~~-~~~~e~i~~~l~~L~~~l~~~~~~~~~~~ 439 (469)
+|+-++.+ ..++.++++++.||...+...++..+..+
T Consensus 374 ~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~aked 411 (432)
T KOG3843|consen 374 AYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKELAKED 411 (432)
T ss_pred hHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 23333221 14789999999999988877777655443
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.64 E-value=0.016 Score=59.64 Aligned_cols=306 Identities=15% Similarity=0.189 Sum_probs=169.3
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE--eCChH---HHHHHHHHHh-cCCC----CEEEEccCCCcChHHHHhhh
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVL--TAGAT---SANETLMFCL-AEPG----EAFLLPTPYYPGFDRDLKWR 155 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~--t~G~~---~al~~~~~~l-~~~g----d~Vl~~~P~y~~~~~~~~~~ 155 (469)
+|+.++-+.+.+.+....| -|++.+ .+|++ .++. ++++. ...| ...++|.-.+..-..++.++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG------~D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma 650 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITG------FDSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA 650 (1001)
T ss_pred hhHHHHHHHHHHHhheeec------ccceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhc
Confidence 6889999999988875533 345444 33332 3343 33443 3334 34566666777767777777
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|.++++|.++..+ .+|..+|++..++... +..++.++-|+. .|.. .+.++.++++.++||.-|..|.+-..
T Consensus 651 -gmkvvpV~~~~~G--~id~~dLk~kaekh~~---~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 651 -GMKVVPVGCDANG--NIDMVDLKAKAEKHKD---NLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred -CCEEEEeeccCCC--CccHHHHHHHHHHhhh---hhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCcc
Confidence 9999999998655 5888999888765422 567788888863 3433 34677899999999999999988753
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC----cceEEEEEecCHHHHHHHHH--------------
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP----GFRVGAIYSNDDMVVAAATK-------------- 297 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----GlRiG~li~~~~~~~~~~~~-------------- 297 (469)
-.-+ .-+.- +.+..+.=--++|+|..| |-.+|=|-. ++.+...+-.
T Consensus 722 AqVG---lc~pG------------d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP~HpVvs~~~~~~~~~ 785 (1001)
T KOG2040|consen 722 AQVG---LCRPG------------DIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSPGRPEDTSP 785 (1001)
T ss_pred ceec---ccCCc------------cccccceeecccceeeecCCCCCCCCCccch-hhhccccCCCCCccCCCCCCCCCC
Confidence 2111 00101 112222222577777443 333444322 2222221110
Q ss_pred h-----cccccCcH-HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc--eEEEEEeccccc
Q 043923 298 M-----SSFGLVSS-QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA--GLFCWVDMRHLL 368 (469)
Q Consensus 298 ~-----~~~~~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~--g~~~~v~~~~~~ 368 (469)
+ .++++... +..++-.+++....+ +..-+.-.-+..++.++|+.+ .+-+....+ +.=+.+++.+..
T Consensus 786 ~gsVsaaP~Gsa~ILpISwaYikmMG~~GL-----~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK 860 (1001)
T KOG2040|consen 786 VGSVSAAPWGSALILPISWAYIKMMGSGGL-----KDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFK 860 (1001)
T ss_pred ccceeccCCCcceeehhHHHHHHHhccccc-----chhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhc
Confidence 0 11121111 233445555555443 222222223557788888876 333333332 111235665544
Q ss_pred ccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 369 RSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 369 ~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.... .+..+.+++| .++|+....-++. -++.+-|-... -+.+|++++.+++-.+-++..+
T Consensus 861 ~~ag-ieavDvAKRL-~DYgFHaPTmswP---V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 861 KTAG-IEAVDVAKRL-MDYGFHAPTMSWP---VAGTLMIEPTESEDKAELDRFCDALISIREEIAQ 921 (1001)
T ss_pred cccC-CcHHHHHHHH-HhccCCCCccccc---cCCceEeccCccccHHHHHHHHHHHHHHHHHHHH
Confidence 3332 2334556665 5889876544332 24556665543 3779999999888766555544
No 393
>PLN02672 methionine S-methyltransferase
Probab=96.85 E-value=0.067 Score=60.06 Aligned_cols=192 Identities=16% Similarity=0.170 Sum_probs=122.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh------cCCCCEEEEccCCCcChHHHH
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL------AEPGEAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l------~~~gd~Vl~~~P~y~~~~~~~ 152 (469)
..-|-++.|...+|..||.|++.+++ +++++++|++.++-..|+..+++.+ ++.+.+-.++. .+..++
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 492 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK----KWLTSL 492 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH----HHHhHh
Confidence 34577888999999999999999988 7899999999999999998887765 23332222221 122222
Q ss_pred hhh---------CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 153 KWR---------TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 153 ~~~---------~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
... ..+.|+.-|.. .+.+.+.|++. ++++|+..--. +-..+....+.|++.+++-
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 556 (1082)
T PLN02672 493 AIENATSDSKSDDVITVIEAPRQ--------SDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEI 556 (1082)
T ss_pred hhhcccccCccCCeEEEEeCCCc--------chHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhh
Confidence 222 02344444432 13455555554 77776644222 3344556788999999999
Q ss_pred CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH
Q 043923 224 NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 224 ~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~ 297 (469)
|+.++.|..-.--.-..+......+++..- ..+.+..++.++-|.==.+.+-+.+++.-++.+...+.+
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (1082)
T PLN02672 557 GARLFLDISDHLELSSLPGSNGVLKYLAGH-----PLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSK 625 (1082)
T ss_pred CcEEEEehhhheeeccCCCcccHHHHhcCC-----CCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHH
Confidence 999999986541111122223444444321 134566667788876656999999999877666665543
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.58 E-value=0.51 Score=44.71 Aligned_cols=160 Identities=12% Similarity=0.092 Sum_probs=102.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEEccCCCcChH----HHHhhhCCCEEE--Eeecc-CCCCcccCHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPG---EAFLLPTPYYPGFD----RDLKWRTGVEIV--PIQCT-SLNGFQITETAI 178 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~g---d~Vl~~~P~y~~~~----~~~~~~~g~~~~--~v~~~-~~~~~~~d~~~l 178 (469)
...+.|.+.|+-|..+..++.+|.+|- -+|+++.-.|+.-. ..++.. |+.+. .+.+. .++.-.+..+++
T Consensus 126 A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lh-G~~~e~sm~~iePREGEetlRteDI 204 (465)
T KOG3846|consen 126 AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLH-GISPENSMIQIEPREGEETLRTEDI 204 (465)
T ss_pred CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhc-CCChHHheEEecccccccchhHHHH
Confidence 567889999999999999999998775 36888887776533 334444 65432 12221 234445666776
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccC
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENT 258 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~ 258 (469)
.+.|+. .+....+|+++--+.-||+.++.. +|-..-+..|+++=.|-+++ ++.-+. .+.
T Consensus 205 Ld~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~---aIT~Agq~kgc~VGfDLAHA---vgNVpL-~LH----------- 263 (465)
T KOG3846|consen 205 LDTIEK---NGDEIALVCFSGVQYYTGQYFDIG---AITFAGQFKGCLVGFDLAHA---VGNVPL-QLH----------- 263 (465)
T ss_pred HHHHHh---cCCeEEEEEeecceeecccccchh---hhhhcccCCCcEechhhhhh---hcCCce-EEe-----------
Confidence 666654 344677777777788999999844 45544456799999999987 554431 211
Q ss_pred CcCCeEEEEccCccccCCCcceEEEEEecCHHH
Q 043923 259 QVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV 291 (469)
Q Consensus 259 ~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~ 291 (469)
.++..+.|+.--|.+....=.+|-+...++..
T Consensus 264 -dWgVDFACWCSYKYlnaGaGgIgGlFvHekh~ 295 (465)
T KOG3846|consen 264 -DWGVDFACWCSYKYLNAGAGGIGGLFVHEKHT 295 (465)
T ss_pred -ecCCceEEEeeecccccCCCccceeeeehhhh
Confidence 44677777777776642222355555544433
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.05 E-value=0.56 Score=44.01 Aligned_cols=334 Identities=15% Similarity=0.143 Sum_probs=170.2
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
|..+|+|+.|.-.+|.+.+.++-++..+- .-.|++..+-.++ ......+.+.--..+++.++ ++-.-+-+++
T Consensus 5 ~~~vvnFaaGPAklp~~VL~e~qkdl~n~---~g~GisV~EmSHR---sk~f~kii~~tes~lreLln--iPdn~~vlf~ 76 (370)
T KOG2790|consen 5 PERVVNFAAGPAKLPESVLLEAQKDLLNF---NGSGISVMEMSHR---SKDFAKIINDTESLLRELLN--IPDNYKVLFL 76 (370)
T ss_pred ccceeecCCCcccCCHHHHHHHHHHhhcc---CCCcceEEEeccc---chhHHHHHHHHHHHHHHHHc--CCCceeEEEE
Confidence 56789999999888988877776654321 1122222222222 11223344443334443333 3323334556
Q ss_pred eCChHHHHHHHHHHhc--CCC---CEEEEccCCCcChHHHHhhhCCCE-EEEeeccCCC-CcccCHHHHHHHHHHHHhcC
Q 043923 117 TAGATSANETLMFCLA--EPG---EAFLLPTPYYPGFDRDLKWRTGVE-IVPIQCTSLN-GFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 117 t~G~~~al~~~~~~l~--~~g---d~Vl~~~P~y~~~~~~~~~~~g~~-~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~ 189 (469)
-.|++.-+.++...|. +.| |-|+.-..+--.+.++- .. |.. .+..+...-. +--+|.+.++. +
T Consensus 77 QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAk-k~-~~~~~V~~~~k~y~ygkvPd~~~w~~--------~ 146 (370)
T KOG2790|consen 77 QGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAK-KY-GTPNIVIPKLKSYTYGKVPDPSTWEL--------N 146 (370)
T ss_pred eCCCcccccccchhhhccccCCccceEEeccccHHHHHHHH-hh-CCceEEeccccccccCcCCChhhccc--------C
Confidence 6778887877777775 444 66666665444444433 33 433 4444332111 11134444443 2
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++.+.|++|.--...|.-++.-. +-.-++.++|.|-+.- |-..+ .. .....+++.+
T Consensus 147 ~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn---flSrp-vD--------------vsk~gvi~aG 202 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN---FLSRP-VD--------------VSKFGVIFAG 202 (370)
T ss_pred CCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc---hhcCC-cc--------------chhcceEEec
Confidence 35667888855445576554222 1124678888886543 32222 12 2234566788
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHH-------------HhcccccCcHHHH----HHHHHHhcCchhhHHHHHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAAT-------------KMSSFGLVSSQTQ----YLLSALLSDKKFTQNYISENKKR 332 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~-------------~~~~~~~~s~~~q----~~~~~~l~~~~~~~~~~~~~~~~ 332 (469)
.-|.+|.+|+- .++..++.+..... +-+.+.+++.... .....+++.+.. ..+.+.
T Consensus 203 AQKN~G~aG~T--vvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl-----~a~e~~ 275 (370)
T KOG2790|consen 203 AQKNVGPAGVT--VVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL-----AAMEKL 275 (370)
T ss_pred cccccCccccE--EEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccH-----HHHHHH
Confidence 99999988854 33443433322111 0011222222222 233444555543 344444
Q ss_pred HHHHHHHHHHHHHhc-CCceec---C-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEE
Q 043923 333 LKQRHRKLVSGLEKA-GISCLK---S-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 407 (469)
Q Consensus 333 l~~~~~~l~~~L~~~-g~~v~~---~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi 407 (469)
-.+..+.+.+.+.+. |+-..+ . .+-+-+.+++.+ + +-+.++.....+++=|.+- |.. .-|.+|.
T Consensus 276 n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~----d--~Le~eFLkeA~~~~mv~LK-GhR----SVGGiRA 344 (370)
T KOG2790|consen 276 NQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEK----D--ELEAEFLKEAAKEHMVQLK-GHR----SVGGIRA 344 (370)
T ss_pred HHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecc----h--HHHHHHHHHHHHhhhhccc-ccc----ccccchh
Confidence 455667888888876 442222 1 122334444431 1 3334566666655333332 221 2356999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHHHh
Q 043923 408 CFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 408 ~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
|+-. ++-++.+++++-++++.+.
T Consensus 345 SlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 345 SLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhccccHHHHHHHHHHHHHHHHh
Confidence 9855 5888888877777776654
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=92.06 E-value=18 Score=38.20 Aligned_cols=87 Identities=17% Similarity=0.209 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
+-++...+++....-.|...|+..|-++... .||=.+++.-.. ...++..+.+++ +|-++-- +++
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~aghel~~k--~fFDTLkI~~~~------s~~~~l~rA~~~-~iNlr~~------ed~ 455 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKNAGHELQHK--PFFDTLKIRCGC------SAEEVLDRAAKR-QINLRLV------EDG 455 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhccc--cccceEEEEecC------cHHHHHHHHHhh-cCceEEe------ecC
Confidence 3456666667777778888888877554432 266555544211 122455555544 5655521 355
Q ss_pred eEEEEeec-CCHHHHHHHHHHHH
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
.+=+++.. +++++++.++..+.
T Consensus 456 tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 456 TIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ceEEeecccccHHHHHHHHHHHc
Confidence 67788765 47889998888775
No 397
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.56 E-value=6 Score=37.80 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=62.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhC--CCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT--GVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+..+-|++|.|++..=..+..-|.+.|-++++-+-.=.+..+..+... | ++..+-+|-. +.+++....++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHHH
Confidence 556778888888888888888888888877666554444443433221 4 5555555532 3455555555444
Q ss_pred hcCCceeEEEEecCCCCC---CCCCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPL---GTTMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPt---G~~~s~e~l~~l~~~ 219 (469)
+.-..+. |+++|..-.+ .--.+.+++++..++
T Consensus 110 ~e~G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 110 KEVGDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HhcCCce-EEEeccccccCCCccCCCHHHHHHHHHH
Confidence 4444555 5777763323 234678888777764
No 398
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=86.36 E-value=7.8 Score=35.35 Aligned_cols=98 Identities=19% Similarity=0.307 Sum_probs=64.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC--------------EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHH
Q 043923 114 IVLTAGATSANETLMFCLAEPGE--------------AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIE 179 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd--------------~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 179 (469)
+.+-+|+.....++..++ +.|- ......|........+... |+.++...... ...-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~-gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAM-GIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhc-CCceEEEecCc--cchhhHHHHH
Confidence 567788888877777666 3332 2222222111112223333 88888877652 2334578888
Q ss_pred HHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 180 EAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 180 ~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
++++.. +..+|+ +|.+++..++.++=.+|++.|+.+
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 888764 555655 899999999999999999999854
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=84.86 E-value=5.8 Score=36.56 Aligned_cols=97 Identities=13% Similarity=0.183 Sum_probs=55.6
Q ss_pred EEEeCC-hHHHHHHHHHHhcCCCCEEEE-ccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 114 IVLTAG-ATSANETLMFCLAEPGEAFLL-PTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 114 i~~t~G-~~~al~~~~~~l~~~gd~Vl~-~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
|+++.+ |..+- .++.+|.+++-.|.+ ..+.-......++.. |++++..+++ |.+.|.++++ +
T Consensus 1 I~V~GatG~~G~-~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~-g~~vv~~d~~-------~~~~l~~al~-------g 64 (233)
T PF05368_consen 1 ILVTGATGNQGR-SVVRALLSAGFSVRALVRDPSSDRAQQLQAL-GAEVVEADYD-------DPESLVAALK-------G 64 (233)
T ss_dssp EEEETTTSHHHH-HHHHHHHHTTGCEEEEESSSHHHHHHHHHHT-TTEEEES-TT--------HHHHHHHHT-------T
T ss_pred CEEECCccHHHH-HHHHHHHhCCCCcEEEEeccchhhhhhhhcc-cceEeecccC-------CHHHHHHHHc-------C
Confidence 344444 44443 344555556644433 333322223334555 9998866653 6788988887 5
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
...|+++.|..+ .-..+....+++.|++.|+-.++
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 666777666443 23445678899999998865554
No 400
>PRK04296 thymidine kinase; Provisional
Probab=79.80 E-value=24 Score=31.53 Aligned_cols=125 Identities=16% Similarity=0.190 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHhcCCCCEEEEccCCCcC---hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 120 ATSANETLMFCLAEPGEAFLLPTPYYPG---FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
++.++..+.++. ..|..|++..|.+.. ....+... |..+..++.. ..+++...+.+ ...+..+|+
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~l-g~~~~~~~~~-------~~~~~~~~~~~---~~~~~dvvi 83 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRI-GLSREAIPVS-------SDTDIFELIEE---EGEKIDCVL 83 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCC-CCcccceEeC-------ChHHHHHHHHh---hCCCCCEEE
Confidence 456666665554 568888887774332 22233333 5443332221 22334433332 123567777
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+..- ..++.+++.++++.++..|+.+|+=.-..+ |.+..+.....+.+ ..+.++.+.+.-
T Consensus 84 IDEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~--~~~~~f~~~~~L~~--------~aD~V~~l~~vC 143 (190)
T PRK04296 84 IDEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD--FRGEPFEGSPYLLA--------LADKVTELKAIC 143 (190)
T ss_pred EEcc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc--cccCcCchHHHHHH--------hcCeEEEeeEEc
Confidence 7755 457788888899998889988887655544 44544445445544 335666554443
No 401
>PRK08265 short chain dehydrogenase; Provisional
Probab=76.08 E-value=41 Score=31.47 Aligned_cols=101 Identities=17% Similarity=0.060 Sum_probs=54.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.+++.++.......
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDI-----TDDAAIERAVATVVARFG 79 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 345667766655555666777788888877654332233333333 55666666653 256777777765544334
Q ss_pred ceeEEEEecCC--CCCCCCCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPS--NPLGTTMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~--NPtG~~~s~e~l~~l~~ 218 (469)
+++.+| .|.. .+.+...+.+++++..+
T Consensus 80 ~id~lv-~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 80 RVDILV-NLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCCEEE-ECCCCCCCCcCcCCHHHHHHHHh
Confidence 566544 4332 22223345555555443
No 402
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=73.86 E-value=33 Score=29.29 Aligned_cols=100 Identities=20% Similarity=0.277 Sum_probs=58.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC-EEEEccCC--CcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 114 IVLTAGATSANETLMFCLAEPGE-AFLLPTPY--YPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd-~Vl~~~P~--y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
+++|.|++..=..+...|.+.|+ .|++.... ..... ..+... +.++..+++|- -+.+.++..++....
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDL-----SDPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESET-----TSHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-ccccccccccc-----ccccccccccccccc
Confidence 56666666555566667777755 54544443 22222 223334 78888888763 267888888877665
Q ss_pred cCCceeEEEEecCCCCCCCC--CCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPLGTT--MSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~--~s~e~l~~l~~~ 219 (469)
.......+|.+....+.+.. ++.+++++..+.
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 55677776666444443332 345666666553
No 403
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=70.30 E-value=37 Score=31.27 Aligned_cols=98 Identities=16% Similarity=0.230 Sum_probs=60.7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEE----ccC--CCc----C--h-HHHHhhhCCCEEEEeeccCCCCcccCHHHHHH
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLL----PTP--YYP----G--F-DRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~----~~P--~y~----~--~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
++.-+|+.....++..+... -+.+.+ +.. .|. + . ...+... |+.++.++... ...--.+++.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~al-gipl~~~~~~~--~~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESI-GIPLIKLYTEG--TEEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHc-CCCeEEeecCC--CccHHHHHHHH
Confidence 45778888888888877755 443332 111 111 1 1 1223334 88887766542 22223566666
Q ss_pred HHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 181 AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
++.+. ++..++ +|.+.+..++..+-++|.+.|+..
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKS 114 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEE
Confidence 66543 455544 899999999999999999998854
No 404
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=68.32 E-value=28 Score=30.38 Aligned_cols=89 Identities=12% Similarity=0.126 Sum_probs=50.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|+++.++...=..++..|.+.|-.|......-..... .. +++++.... .|++.+.+++. +..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~-~~~~~~~d~-------~d~~~~~~al~-------~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SP-GVEIIQGDL-------FDPDSVKAALK-------GAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CT-TEEEEESCT-------TCHHHHHHHHT-------TSS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cc-ccccceeee-------hhhhhhhhhhh-------hcc
Confidence 3455443333344556666666666655444332222 33 777776554 26788888876 566
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
.|+.+-+..+. ..+..+.+++.|++++
T Consensus 63 ~vi~~~~~~~~----~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 63 AVIHAAGPPPK----DVDAAKNIIEAAKKAG 89 (183)
T ss_dssp EEEECCHSTTT----HHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhcc----cccccccccccccccc
Confidence 66666543333 2566677777777654
No 405
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=67.93 E-value=68 Score=29.57 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=57.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEc--cCC------Cc-----ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHH
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLP--TPY------YP-----GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~--~P~------y~-----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
++..+|+-....++..++.. .+.+.+. .|. |+ .....++.. |+.++.+.... .+.-..+++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~al-giPl~~~~~~~--~~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAV-GIPLIKLYTSG--EEEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHc-CCCeEEEEcCC--chhHHHHHHHH
Confidence 45678887777777766544 4433222 221 11 112234444 88887776542 22222344444
Q ss_pred HHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 181 AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
.+.+. ++..|+ +|.+.+..+...+-++|.+.|+..
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~ 114 (222)
T TIGR00289 80 QLGEL-----DVEALC-------IGAIESNYQKSRIDKVCRELGLKS 114 (222)
T ss_pred HHHHc-----CCCEEE-------ECccccHHHHHHHHHHHHHcCCEE
Confidence 44321 455555 899999999999999999998854
No 406
>PRK06483 dihydromonapterin reductase; Provisional
Probab=67.12 E-value=79 Score=28.80 Aligned_cols=77 Identities=12% Similarity=0.140 Sum_probs=41.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++....-......+... |+..+..++ -|.+.+++.++.......++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-GAQCIQADF-------STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCEEEEcCC-------CCHHHHHHHHHHHHhhCCCc
Confidence 4666666655555566667778877776654332223333333 554443332 25567777766554333356
Q ss_pred eEEEE
Q 043923 193 KGVLV 197 (469)
Q Consensus 193 ~~vvl 197 (469)
..++.
T Consensus 76 d~lv~ 80 (236)
T PRK06483 76 RAIIH 80 (236)
T ss_pred cEEEE
Confidence 65443
No 407
>smart00642 Aamy Alpha-amylase domain.
Probab=66.69 E-value=25 Score=30.76 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 209 SRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 209 s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
+.++++++++.|+++|+.||.|-+.-
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 67999999999999999999998875
No 408
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=66.09 E-value=97 Score=28.64 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=42.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-..-...+... ++.. +++|- -|.+.+++.++.......
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~--~~~Dl-----~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFT--IKCDV-----GNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeE--EEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345667666655555666777788877765422111111222222 4444 44432 256777777765544444
Q ss_pred ceeEEEEe
Q 043923 191 KVKGVLVT 198 (469)
Q Consensus 191 ~~~~vvl~ 198 (469)
+++.++.+
T Consensus 79 ~id~li~~ 86 (255)
T PRK06463 79 RVDVLVNN 86 (255)
T ss_pred CCCEEEEC
Confidence 66765544
No 409
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=64.84 E-value=94 Score=28.30 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=45.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|.+............... +.++..+++|- -|.+.++..+++..+...
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANL-----SDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345666665555555566778888887776554333222222223 44454455442 255677776665544334
Q ss_pred ceeEEEEec
Q 043923 191 KVKGVLVTN 199 (469)
Q Consensus 191 ~~~~vvl~~ 199 (469)
++.++|.+.
T Consensus 80 ~id~vi~~a 88 (245)
T PRK12936 80 GVDILVNNA 88 (245)
T ss_pred CCCEEEECC
Confidence 667666553
No 410
>PRK06500 short chain dehydrogenase; Provisional
Probab=62.58 E-value=1e+02 Score=28.16 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=44.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..+++|.++...=..+...|.+.|..|++....-.......... +.++..+.+|. .|.+++...++...+..++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADA-----GDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 35666666555555666777788877776544322222223333 66666666553 2455555555544333345
Q ss_pred eeEEEEe
Q 043923 192 VKGVLVT 198 (469)
Q Consensus 192 ~~~vvl~ 198 (469)
+..+|.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 6665544
No 411
>PRK05872 short chain dehydrogenase; Provisional
Probab=62.14 E-value=97 Score=29.61 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=55.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++...+++|.|+...=..+...|.+.|..|++....-.......... .+.++..+.+|- -|.++++..+++...
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34456777777665556666777788888877654333222222222 134555655552 256777777766544
Q ss_pred cCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. ...+. ..+.+++++..+
T Consensus 82 ~~g~id~vI-~nAG~~~~~~~~~~~~~~~~~~~~ 114 (296)
T PRK05872 82 RFGGIDVVV-ANAGIASGGSVAQVDPDAFRRVID 114 (296)
T ss_pred HcCCCCEEE-ECCCcCCCcCcccCCHHHHHHHHH
Confidence 334666544 4442 22221 235556555544
No 412
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=61.87 E-value=97 Score=28.70 Aligned_cols=83 Identities=13% Similarity=0.088 Sum_probs=47.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc-ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP-GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
...+++|.|++..=..+...|.+.|..|++....-. ......... +.++..+.+|- -|.+++++.+++.....
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADL-----IQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCC-----CCHHHHHHHHHHHHHHc
Confidence 345677777666666677778889988876542211 111122223 55666666653 25677777776554433
Q ss_pred CceeEEEEecC
Q 043923 190 LKVKGVLVTNP 200 (469)
Q Consensus 190 ~~~~~vvl~~P 200 (469)
.++..+| +|.
T Consensus 82 g~iD~lv-~~a 91 (251)
T PRK12481 82 GHIDILI-NNA 91 (251)
T ss_pred CCCCEEE-ECC
Confidence 4566544 444
No 413
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=61.62 E-value=20 Score=35.20 Aligned_cols=66 Identities=17% Similarity=0.311 Sum_probs=41.8
Q ss_pred CCCEEEEccCCCc-ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCCCCHH
Q 043923 134 PGEAFLLPTPYYP-GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTTMSRN 211 (469)
Q Consensus 134 ~gd~Vl~~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~~s~e 211 (469)
++..|++-+...- +..+.+... |+++.-||.+. +.+++.+. +++.|+++| |.+|.-...-.+
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~r-g~~vtVVP~~t------~~eeIl~~---------~pDGiflSNGPGDP~~~~~~i~ 241 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKR-GCRVTVVPADT------SAEEILAL---------NPDGIFLSNGPGDPAPLDYAIE 241 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHC-CCeEEEEcCCC------CHHHHHhh---------CCCEEEEeCCCCChhHHHHHHH
Confidence 3556776665543 455666666 99999999762 45555443 888999987 688854333333
Q ss_pred HHHH
Q 043923 212 ELNL 215 (469)
Q Consensus 212 ~l~~ 215 (469)
.+++
T Consensus 242 ~ik~ 245 (368)
T COG0505 242 TIKE 245 (368)
T ss_pred HHHH
Confidence 3333
No 414
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=61.58 E-value=66 Score=29.16 Aligned_cols=96 Identities=10% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
++...|++..||..|...+ ..|++.|-.|.+-+|....-...+... | ++..+. +.|. .+.+.
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~-~-~i~~~~----~~~~--~~dl~--------- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQ-G-GITWLA----RCFD--ADILE--------- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHc-C-CEEEEe----CCCC--HHHhC---------
Confidence 4456788888888888766 566677777888788765433333333 3 333332 2222 22221
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE-EEecc
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL-ISDEI 232 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i-I~Dea 232 (469)
...+ ++..|+++ +--+++...|++.++++ ++|+.
T Consensus 69 --~~~l-Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 --GAFL-VIAATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred --CcEE-EEECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 4444 44445543 12356888999999877 35553
No 415
>PRK07063 short chain dehydrogenase; Provisional
Probab=61.43 E-value=1.2e+02 Score=28.14 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=53.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh----CCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR----TGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...+++|.|+...=..+...|.+.|..|++..-.-.......... .+.++..+++|- -|.++++..+++.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~ 80 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV-----TDAASVAAAVAAA 80 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-----CCHHHHHHHHHHH
Confidence 3445777766665555666778888888777554322222222111 145566666653 2456666666654
Q ss_pred HhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.....++..+|.+-...+.+ ...+.+++++..+
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 115 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFA 115 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 43334566554432222222 2245555555443
No 416
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=60.44 E-value=56 Score=31.47 Aligned_cols=111 Identities=18% Similarity=0.234 Sum_probs=62.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCC-C-C-EEEEccCCCcChHHHHhhhCC-CEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEP-G-E-AFLLPTPYYPGFDRDLKWRTG-VEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~-g-d-~Vl~~~P~y~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.+++|.|+--.=...+..+++. . + .+.+..-+|-+-...++...+ -+...+..|- -|.+.+...+.+.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~--- 73 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEY--- 73 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhc---
Confidence 3677777544334444444332 2 3 467778899887666543323 2444554331 2567777777653
Q ss_pred CCceeEEE-----------EecC-----CCCCCCCCCHHHHHHHHHHHHhcC-----eEEEEeccccccccCC
Q 043923 189 HLKVKGVL-----------VTNP-----SNPLGTTMSRNELNLLVNIITEKN-----IHLISDEIYSGTVFSS 240 (469)
Q Consensus 189 ~~~~~~vv-----------l~~P-----~NPtG~~~s~e~l~~l~~~~~~~~-----~~iI~Deay~~~~~~~ 240 (469)
++.+|+ +..| .|--|. ..|++.++++. ..|=.||+|+++..++
T Consensus 74 --~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT-------~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 74 --QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGT-------YTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred --CCCeEEEechhccccccccChhhhhhcchHHH-------HHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 445443 2223 122222 24777777876 3455799999876543
No 417
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=58.39 E-value=1.8e+02 Score=28.33 Aligned_cols=62 Identities=19% Similarity=0.242 Sum_probs=42.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
+..++.++++..++.....-.+...|+++ -+=|.| ++.+...+|+++|++.|..+++|-.-.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 55677777777666543322244544443 444555 467888999999999999999997543
No 418
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=57.43 E-value=1.4e+02 Score=27.64 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=47.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..+++|.|+...=..+...|.+.|.+|++....-.......... +.++..+.+|- .|.+.++..++.......+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 45677666655555666677788988887765543333333333 44555566542 2567777777665444445
Q ss_pred eeEEEEe
Q 043923 192 VKGVLVT 198 (469)
Q Consensus 192 ~~~vvl~ 198 (469)
++.+|.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 6765544
No 419
>PRK06182 short chain dehydrogenase; Validated
Probab=57.22 E-value=1.2e+02 Score=28.33 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=49.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.... .+... +++++..++. |.+.+++.++.......++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~-~~~~~-~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME-DLASL-GVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHhC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 4666666554445555667778888776543322111 12223 5555554432 5677777766544444466
Q ss_pred eEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 193 KGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 193 ~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
..+|.+-...+.|. ..+.++++...+
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~ 103 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFE 103 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 66554433333332 224455555443
No 420
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=56.98 E-value=39 Score=32.53 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=42.1
Q ss_pred EccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHH
Q 043923 140 LPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVN 218 (469)
Q Consensus 140 ~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~ 218 (469)
.--|+|.......... ...-++.+|.. .-++.++++.+. +++.+++.+-.. +.++-++|.+
T Consensus 49 ~G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~ 110 (291)
T PRK05678 49 LGLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKA 110 (291)
T ss_pred eCeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHH
Confidence 3444565555544421 14445555532 124555555443 677766654332 3455568999
Q ss_pred HHHhcCeEEEEeccc
Q 043923 219 IITEKNIHLISDEIY 233 (469)
Q Consensus 219 ~~~~~~~~iI~Deay 233 (469)
+++++|+.++==.+.
T Consensus 111 ~a~~~girvlGPNc~ 125 (291)
T PRK05678 111 YLERKKTRLIGPNCP 125 (291)
T ss_pred HHHHcCCEEECCCCC
Confidence 999999887744443
No 421
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=56.56 E-value=1.4e+02 Score=27.89 Aligned_cols=102 Identities=17% Similarity=0.168 Sum_probs=64.1
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEccCCCcChHHHHhhhCC-CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 113 KIVLTAGATSANE-TLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTG-VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 113 ~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.|++..|++.+|- .+.+.|.+.|-+|++..---......+... + .++..+.+|- -|.+++++.++.....-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-GAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-ccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 4666667666665 455668889988888876665555555555 6 3555555552 266788888876655555
Q ss_pred ceeEEEEecCC-CCCCC--CCCHHHHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLGT--TMSRNELNLLVNIIT 221 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~~~~ 221 (469)
+++. +++|-. -+.+. -...++|+.+++.--
T Consensus 81 ~iDi-LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni 113 (246)
T COG4221 81 RIDI-LVNNAGLALGDPLDEADLDDWDRMIDTNV 113 (246)
T ss_pred cccE-EEecCCCCcCChhhhCCHHHHHHHHHHHH
Confidence 7774 555553 23322 246778888777443
No 422
>PRK07825 short chain dehydrogenase; Provisional
Probab=56.40 E-value=1.3e+02 Score=28.21 Aligned_cols=81 Identities=10% Similarity=-0.022 Sum_probs=40.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|-.|++....-.......... + ++..+.+|- -|.+.++..++...+...
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-G-LVVGGPLDV-----TDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-cceEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345666655554444555667778877776543222122222222 3 233344432 156777777765544333
Q ss_pred ceeEEEEe
Q 043923 191 KVKGVLVT 198 (469)
Q Consensus 191 ~~~~vvl~ 198 (469)
++..+|.+
T Consensus 78 ~id~li~~ 85 (273)
T PRK07825 78 PIDVLVNN 85 (273)
T ss_pred CCCEEEEC
Confidence 56654433
No 423
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=55.87 E-value=24 Score=34.28 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=44.8
Q ss_pred HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 151 DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
.+... +.++..+.+..+.+|.+..+...+.-+. +.. .++ .+.|-.++.+|+++|++.|+++|+-||-.
T Consensus 24 ~ma~~-K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 24 VLARY-KINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred HHHHh-CCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEEe
Confidence 34444 8888888887666777765544433221 101 112 24456899999999999999999987753
No 424
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=55.03 E-value=1.7e+02 Score=26.74 Aligned_cols=85 Identities=14% Similarity=0.116 Sum_probs=45.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... .+.++..+.+|- .|.+.+...+++.....
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 445677766554445566667777877776554332222222221 034555565552 36677777776543333
Q ss_pred CceeEEEEecC
Q 043923 190 LKVKGVLVTNP 200 (469)
Q Consensus 190 ~~~~~vvl~~P 200 (469)
.++..||.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 46676665543
No 425
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=54.83 E-value=44 Score=27.66 Aligned_cols=59 Identities=24% Similarity=0.443 Sum_probs=44.4
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE--ecC---CCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV--TNP---SNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl--~~P---~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
+++++.+|+. + .+|+..+.+++.+ ..+.|++ |.| |+..|.......++.+-++..+.|+
T Consensus 28 ~vriIrvpC~--G--rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPCS--G--RVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccCC--C--ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 5788888886 2 4899999999886 5666655 444 5688998888888888887777654
No 426
>PRK05717 oxidoreductase; Validated
Probab=54.79 E-value=1.7e+02 Score=26.92 Aligned_cols=83 Identities=11% Similarity=0.017 Sum_probs=44.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....+++|.|+...=..++..|.+.|..|++....-.......... +.++..+++|- -|.+.+.+.+++..+..
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDV-----ADEAQVAAGVAEVLGQF 82 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3345667666555555566677778877777654332222222333 44555555542 24566666665543333
Q ss_pred CceeEEEEe
Q 043923 190 LKVKGVLVT 198 (469)
Q Consensus 190 ~~~~~vvl~ 198 (469)
+++..+|.+
T Consensus 83 g~id~li~~ 91 (255)
T PRK05717 83 GRLDALVCN 91 (255)
T ss_pred CCCCEEEEC
Confidence 356655544
No 427
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=54.56 E-value=30 Score=30.62 Aligned_cols=123 Identities=14% Similarity=0.187 Sum_probs=71.0
Q ss_pred CC-hHHHHHHHHHHhcCCCCEEEEccCCCcChH---HHHhhhCCCEEEEe--eccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 118 AG-ATSANETLMFCLAEPGEAFLLPTPYYPGFD---RDLKWRTGVEIVPI--QCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 118 ~G-~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---~~~~~~~g~~~~~v--~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+| +++++..+ ..+...|..|++..|....-. .+.... |.....+ +.+ ++..+...+.. +
T Consensus 12 sGKS~eLi~~~-~~~~~~~~~v~~~kp~~D~R~~~~~I~s~~-g~~~~~~~~~~~-------~~~~~~~~~~~------~ 76 (176)
T PF00265_consen 12 SGKSTELIRRI-HRYEIAGKKVLVFKPAIDTRYGEDKIVSHD-GISLEAIVDPID-------NLFEIIDILEN------D 76 (176)
T ss_dssp SSHHHHHHHHH-HHHHHTT-EEEEEEESTSCCCCSSEEEHTT-SCEEEEESSEES-------SGGGGGGGCCT------T
T ss_pred ChhHHHHHHHH-HHHHhCCCeEEEEEecccCcCCCCeEEecC-CCcccccccchh-------hHHHHHHHhcc------C
Confidence 56 44454444 444557888998888543221 122233 6666665 322 22223322221 4
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+..|++. -++.++ +++.++++.+..+|+.|++=.--.+ |.+.++.+...+++ ..+.+.-+.+.-
T Consensus 77 ~dvI~ID-----EaQFf~-~~i~~l~~~~~~~g~~Vi~~GL~~d--f~~~~F~~~~~Ll~--------~Ad~i~kl~avC 140 (176)
T PF00265_consen 77 YDVIGID-----EAQFFD-EQIVQLVEILANKGIPVICAGLDTD--FRGEPFGGSPRLLP--------LADKITKLKAVC 140 (176)
T ss_dssp CSEEEES-----SGGGST-TTHHHHHHHHHHTT-EEEEEEESB---TTSSB-TTHHHHHH--------H-SEEEEE-EE-
T ss_pred CCEEEEe-----chHhhH-HHHHHHHHHHHhCCCeEEEEeeCCc--cccCcchhHHHHHh--------hCCeEEEeccEE
Confidence 7777776 455577 7888899999999999998766554 67778888888877 346666665544
No 428
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=53.91 E-value=1.1e+02 Score=29.31 Aligned_cols=97 Identities=18% Similarity=0.093 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCCCHH--------HHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTMSRN--------ELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~s~e--------~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
|.+.+.+.+.+. ++.+||-+-. ++....--.++ --..+++.|.+.|+.+|-=. .+++|++....
T Consensus 38 d~~~v~~~i~~~-----~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS--TDyVFDG~~~~ 110 (281)
T COG1091 38 DPDAVLEVIRET-----RPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS--TDYVFDGEKGG 110 (281)
T ss_pred ChHHHHHHHHhh-----CCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee--cceEecCCCCC
Confidence 567888888764 7887665544 34444333322 34578999999998877532 23457765422
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCC-------C---cceEEEEEec
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-------P---GFRVGAIYSN 287 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-------~---GlRiG~li~~ 287 (469)
+..+- +..+=+-+++-||..|= + =+|.+|+.+.
T Consensus 111 ~Y~E~----------D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~ 153 (281)
T COG1091 111 PYKET----------DTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGE 153 (281)
T ss_pred CCCCC----------CCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecC
Confidence 21111 22333445677775441 1 1677888764
No 429
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.82 E-value=76 Score=27.85 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=59.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
-++|.|++..-.....-|.+.|..|++. -|.-. -...++.. |-+++..|.+-. ..+++..++...+.+-.+.
T Consensus 12 alvtggasglg~ataerlakqgasv~lldlp~sk-g~~vakel-g~~~vf~padvt-----sekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSK-GADVAKEL-GGKVVFTPADVT-----SEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred EEeecCcccccHHHHHHHHhcCceEEEEeCCccc-chHHHHHh-CCceEEeccccC-----cHHHHHHHHHHHHhhccce
Confidence 4577777776667777788888665555 45444 45567777 999999987632 3466777776554444455
Q ss_pred eEEEEecC--------CCCCCCCCCHHHHHHHHH
Q 043923 193 KGVLVTNP--------SNPLGTTMSRNELNLLVN 218 (469)
Q Consensus 193 ~~vvl~~P--------~NPtG~~~s~e~l~~l~~ 218 (469)
.+.+-|-- +---+..-..|+.++.++
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvid 118 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVID 118 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheee
Confidence 65554421 112344445566665554
No 430
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=53.57 E-value=16 Score=38.92 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=29.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 203 PLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 203 PtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
||-..=++++++++++.|++.|+-||+|=+|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 4445558899999999999999999999999873
No 431
>PRK06841 short chain dehydrogenase; Provisional
Probab=53.31 E-value=1.8e+02 Score=26.63 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=43.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.++...=..+...|.+.|..|++........ .......+.++..+++|- -+.+++++.++...+...
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 34566765555444455566777888877765433211 111111144444555542 256777777665444334
Q ss_pred ceeEEEEe
Q 043923 191 KVKGVLVT 198 (469)
Q Consensus 191 ~~~~vvl~ 198 (469)
+...++.+
T Consensus 89 ~~d~vi~~ 96 (255)
T PRK06841 89 RIDILVNS 96 (255)
T ss_pred CCCEEEEC
Confidence 56665544
No 432
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=53.16 E-value=53 Score=31.71 Aligned_cols=97 Identities=18% Similarity=0.251 Sum_probs=57.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.|++|.|+-=-=......|.+.|-.|++-+.-..+........ -.+++.-++ .|-+.|.+.+.+. ++
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-~~~f~~gDi-------~D~~~L~~vf~~~-----~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-QFKFYEGDL-------LDRALLTAVFEEN-----KI 68 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-cCceEEecc-------ccHHHHHHHHHhc-----CC
Confidence 3788888655555566667788876666666555566555533 234444433 3667777777764 66
Q ss_pred eEEE-----------EecC-----CCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 193 KGVL-----------VTNP-----SNPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 193 ~~vv-----------l~~P-----~NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
.+|+ +.+| ||-.|. ..|++.|+++|+.=++
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gT-------l~Ll~am~~~gv~~~v 114 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGT-------LNLIEAMLQTGVKKFI 114 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhH-------HHHHHHHHHhCCCEEE
Confidence 6655 2344 333333 3488888888754443
No 433
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=52.35 E-value=1.5e+02 Score=29.27 Aligned_cols=109 Identities=12% Similarity=0.066 Sum_probs=59.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEE--EEccCCCcC------hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAF--LLPTPYYPG------FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~V--l~~~P~y~~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
.|.|+..+||-....++..+...-|..+ +..++.|.. ....+... |++.+.+.. |.+.+....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~l-gvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKL-GFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHc-CCCeEEEeC--------CHHHHHHHH
Confidence 6788889998777766533321223333 344555542 22223334 888777664 334444433
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
... .+ +..+|...+. ......+.++|.++|+.+|+..-..+-.|++
T Consensus 131 ~~~------~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHH------Hh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 321 11 2233433322 2235667889999999999887666544544
No 434
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=52.32 E-value=1.9e+02 Score=26.68 Aligned_cols=82 Identities=17% Similarity=0.225 Sum_probs=46.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....+++|.|+...=..+...|.+.|..|++..-. ..... ..... +.++..+++|- -|.+.++..+++..
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~~~~~~ 86 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDL-----TKPESAEKVVKEAL 86 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34557777666665566667777888877765443 22211 12222 45555666553 14567777666554
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
...+.++.+|.+
T Consensus 87 ~~~g~id~li~~ 98 (258)
T PRK06935 87 EEFGKIDILVNN 98 (258)
T ss_pred HHcCCCCEEEEC
Confidence 444456765544
No 435
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=52.29 E-value=24 Score=34.66 Aligned_cols=69 Identities=14% Similarity=0.254 Sum_probs=44.8
Q ss_pred HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 151 DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
.+... +.++..+.+..+.+|.+.++...+.-. ..+ . .....+.|..+|.+|+++|++.|+++|+-||--
T Consensus 26 ~ma~~-KlN~lhlHLtD~~~~rle~~~~P~lt~--------~ga-~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPE 94 (329)
T cd06568 26 LLALY-KLNVLHLHLTDDQGWRIEIKSWPKLTE--------IGG-S-TEVGGGPGGYYTQEDYKDIVAYAAERHITVVPE 94 (329)
T ss_pred HHHHh-CCcEEEEEeecCCcceeeecCcccccc--------ccc-c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 34444 788888888766677765544432211 000 0 112245677899999999999999999988753
No 436
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=52.04 E-value=51 Score=31.70 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=41.5
Q ss_pred EccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHH
Q 043923 140 LPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVN 218 (469)
Q Consensus 140 ~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~ 218 (469)
..-|+|+......... ...-++.+|.+ .-++.++++.+. .++.+++.... ++..+-++|.+
T Consensus 47 ~G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~------Gvk~avIis~G------f~e~~~~~l~~ 108 (286)
T TIGR01019 47 LGLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDA------GIELIVCITEG------IPVHDMLKVKR 108 (286)
T ss_pred cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHC------CCCEEEEECCC------CCHHHHHHHHH
Confidence 3445566555544421 13444455432 123445554443 67776665443 23344578999
Q ss_pred HHHhcCeEEEEeccc
Q 043923 219 IITEKNIHLISDEIY 233 (469)
Q Consensus 219 ~~~~~~~~iI~Deay 233 (469)
+|+++|+.|+==.+.
T Consensus 109 ~a~~~girilGPNc~ 123 (286)
T TIGR01019 109 YMEESGTRLIGPNCP 123 (286)
T ss_pred HHHHcCCEEECCCCc
Confidence 999999887644443
No 437
>PRK06196 oxidoreductase; Provisional
Probab=51.98 E-value=1.3e+02 Score=28.92 Aligned_cols=82 Identities=12% Similarity=0.105 Sum_probs=41.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....++||.|+...=..+...|...|..|++..-.-...........++.+ +++|- -|.+.+++.++......
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~--~~~Dl-----~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEV--VMLDL-----ADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeE--EEccC-----CCHHHHHHHHHHHHhcC
Confidence 334566666655444455566777887777654322212222221113333 34332 15677777776654433
Q ss_pred CceeEEEEe
Q 043923 190 LKVKGVLVT 198 (469)
Q Consensus 190 ~~~~~vvl~ 198 (469)
.++..+|.+
T Consensus 98 ~~iD~li~n 106 (315)
T PRK06196 98 RRIDILINN 106 (315)
T ss_pred CCCCEEEEC
Confidence 466654433
No 438
>PRK06139 short chain dehydrogenase; Provisional
Probab=51.55 E-value=1.6e+02 Score=28.74 Aligned_cols=103 Identities=9% Similarity=0.119 Sum_probs=53.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.++...=..+...|.+.|..|++..-.-..... .++.. |.++..+++|- -|.+++++.++...
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~~~~~~~ 79 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDV-----TDADQVKALATQAA 79 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 34456666655554455556677888887776533222211 22233 66766666653 25677777776554
Q ss_pred hcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
....++..+|.+-.....|. ..+.++++++.+
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 44345665544322222222 234555555444
No 439
>PRK06194 hypothetical protein; Provisional
Probab=51.46 E-value=2.1e+02 Score=26.84 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=44.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
..+++|.|+...=..+...|.+.|..|++....-....... ... +.++..+..|- -|.+.+++.++.....
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDV-----SDAAQVEALADAALER 80 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 45677766655555566667788887776654322222222 222 55666666553 2567777777654443
Q ss_pred CCceeEEEEe
Q 043923 189 HLKVKGVLVT 198 (469)
Q Consensus 189 ~~~~~~vvl~ 198 (469)
..++..|+.+
T Consensus 81 ~g~id~vi~~ 90 (287)
T PRK06194 81 FGAVHLLFNN 90 (287)
T ss_pred cCCCCEEEEC
Confidence 3456654433
No 440
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=51.23 E-value=2.4e+02 Score=27.44 Aligned_cols=127 Identities=11% Similarity=0.178 Sum_probs=69.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcc---CCCcChHHHHhhhCC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPT---PYYPGFDRDLKWRTG 157 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~---P~y~~~~~~~~~~~g 157 (469)
.|...+|....-..|++.+. .+...++++-++..|-. ++.+... -.|++.. |.-......+..- |
T Consensus 66 ~~~na~~~~~~a~~iarql~--------~~~~dviv~i~tp~Aq~-~~s~~~~--iPVV~aavtd~v~a~Lv~~~~~p-g 133 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLV--------GDKPDVIVAIATPAAQA-LVSATKT--IPVVFAAVTDPVGAKLVKSLEQP-G 133 (322)
T ss_pred EeecCCCChHHHHHHHHHhh--------cCCCcEEEecCCHHHHH-HHHhcCC--CCEEEEccCchhhccCCccccCC-C
Confidence 34555677778888888875 24446777666665533 3344422 3344333 2211122222222 4
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE-EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV-LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v-vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Dea 232 (469)
..+..+. |...+++.++-...--|+.+-| ++.||+-+ .|...++++.+.+++.|+-+++=-+
T Consensus 134 ~NvTGvs---------D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~~v 196 (322)
T COG2984 134 GNVTGVS---------DLLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEAAV 196 (322)
T ss_pred CceeecC---------CcchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEEec
Confidence 5555443 2223344333222223456555 78877643 3566788899999999999887544
No 441
>PRK08862 short chain dehydrogenase; Provisional
Probab=51.13 E-value=1.6e+02 Score=26.80 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=47.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...+++|.|+...=..+...|.+.|..|++....-...... +... +.+++.+.+|- .|.+++++.+++..+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKD-----FSQESIRHLFDAIEQ 78 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34567776666555566667788898888865433322222 2223 55666666653 256777777765543
Q ss_pred cCC-ceeEEEEecC
Q 043923 188 RHL-KVKGVLVTNP 200 (469)
Q Consensus 188 ~~~-~~~~vvl~~P 200 (469)
.-. ++.. +++|.
T Consensus 79 ~~g~~iD~-li~na 91 (227)
T PRK08862 79 QFNRAPDV-LVNNW 91 (227)
T ss_pred HhCCCCCE-EEECC
Confidence 323 5665 44444
No 442
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=50.60 E-value=59 Score=29.87 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=51.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEc--cC---C---C-----cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHH
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLP--TP---Y---Y-----PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~--~P---~---y-----~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
+++-+|+.....++..++.+ .+.+.+. .| . | .-....+... |+.++.++.+.. ..--.+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~al-gipl~~~~~~g~--~~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEAL-GIPLIEIPTSGD--EEDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHH-T--EEEEEE-----CCCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHC-CCCEEEEEccCc--cchhhHHHHH
Confidence 56678888888877777655 4322211 11 1 1 1122334445 999998887621 1112466666
Q ss_pred HHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 181 AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
++++. ++.+++ +|.+.+.+.+..+-++|.+.|+..+
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 66532 455444 8999999998888889999988543
No 443
>PRK08589 short chain dehydrogenase; Validated
Probab=50.43 E-value=2.2e+02 Score=26.66 Aligned_cols=100 Identities=14% Similarity=0.168 Sum_probs=53.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++.... ....... ... +.++..+++|- -|.+.++..++....
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 78 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDI-----SDEQQVKDFASEIKE 78 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456666666555556666777889888876554 3322222 222 44566666553 145667776665544
Q ss_pred cCCceeEEEEecCC-C-CCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-N-PLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-N-PtG~--~~s~e~l~~l~~ 218 (469)
...++.. +++|.. . +.+. ..+.+++++..+
T Consensus 79 ~~g~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (272)
T PRK08589 79 QFGRVDV-LFNNAGVDNAAGRIHEYPVDVFDKIMA 112 (272)
T ss_pred HcCCcCE-EEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4345665 444442 2 2222 235555555443
No 444
>PRK05876 short chain dehydrogenase; Provisional
Probab=50.08 E-value=2.2e+02 Score=26.75 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=54.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...+++|.|++..=..+...|...|..|++..-.-....... ... |.++..+++|- -|.+++++.+++...
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDV-----RHREEVTHLADEAFR 79 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 345777776666556666777788887776543222222221 222 55666666653 156777777765544
Q ss_pred cCCceeEEEEecCCC-CCC--CCCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSN-PLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~N-PtG--~~~s~e~l~~l~~ 218 (469)
..+++.+ +++|..- ..| ...+.++++++.+
T Consensus 80 ~~g~id~-li~nAg~~~~~~~~~~~~~~~~~~~~ 112 (275)
T PRK05876 80 LLGHVDV-VFSNAGIVVGGPIVEMTHDDWRWVID 112 (275)
T ss_pred HcCCCCE-EEECCCcCCCCCcccCCHHHHHHHHh
Confidence 4445665 4444421 112 2345566555444
No 445
>PRK07024 short chain dehydrogenase; Provisional
Probab=47.97 E-value=2.3e+02 Score=26.16 Aligned_cols=78 Identities=13% Similarity=0.035 Sum_probs=42.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh--CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR--TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.+++|.|+...=..+...|.+.|..|++....-.......... .+ ++..+.+|- -|.+.+++.++......+
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl-----~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADV-----RDADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCC-----CCHHHHHHHHHHHHHhCC
Confidence 4677766665555666667788888877654322222222211 02 555566553 256777777765544334
Q ss_pred ceeEEE
Q 043923 191 KVKGVL 196 (469)
Q Consensus 191 ~~~~vv 196 (469)
.+..++
T Consensus 78 ~id~lv 83 (257)
T PRK07024 78 LPDVVI 83 (257)
T ss_pred CCCEEE
Confidence 566544
No 446
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=47.76 E-value=29 Score=34.40 Aligned_cols=63 Identities=10% Similarity=0.225 Sum_probs=43.0
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
+... +.++..+.+..+.+|.+.++.+.+.-+. . ....|..++.+|+++|++.|+++|+-||-.
T Consensus 27 ma~~-KlN~lh~HltDd~~~rle~~~~P~Lt~~------g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIPE 89 (348)
T cd06562 27 MAYN-KLNVLHWHITDSQSFPLESPSYPELSKK------G---------AYSPSEVYTPEDVKEIVEYARLRGIRVIPE 89 (348)
T ss_pred HHHh-CCcEEEEeEEcCCCceEeeCCCchhhhc------c---------CcCCCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 4444 7888888876666777765544432110 0 113467799999999999999999888754
No 447
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=47.46 E-value=2.2e+02 Score=25.94 Aligned_cols=77 Identities=9% Similarity=0.073 Sum_probs=44.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...+++|.++...=..+...|.+.|..|++..... .... +.++..+++|- .|.+.+++.+++.....
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQE-DYPFATFVLDV-----SDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhc-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 345677777666555556667778887777665432 2222 45555666553 25677777776554444
Q ss_pred CceeEEEEe
Q 043923 190 LKVKGVLVT 198 (469)
Q Consensus 190 ~~~~~vvl~ 198 (469)
++.++++.+
T Consensus 75 ~~id~vi~~ 83 (252)
T PRK08220 75 GPLDVLVNA 83 (252)
T ss_pred CCCCEEEEC
Confidence 456655433
No 448
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=46.90 E-value=2.4e+02 Score=26.04 Aligned_cols=95 Identities=9% Similarity=0.065 Sum_probs=57.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...|++..||..|...+ ..|++.|..|.+-.|...+-...+.....++++.= .| +.+++.
T Consensus 24 ~~~~VLVVGGG~VA~RK~-~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r------~~--~~~dl~---------- 84 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKG-KTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKG------NY--DKEFIK---------- 84 (223)
T ss_pred CCCEEEEECCCHHHHHHH-HHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeC------CC--ChHHhC----------
Confidence 344799999999998877 45667788888888887544333332213334321 22 233332
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe-EEEEecc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI-HLISDEI 232 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~-~iI~Dea 232 (469)
...+|+.+. + +.+-=+++.+.|++.++ +.++|+.
T Consensus 85 -g~~LViaAT-d-------D~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 85 -DKHLIVIAT-D-------DEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred -CCcEEEECC-C-------CHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 455666552 1 34455779999998774 4455653
No 449
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=46.88 E-value=2.3e+02 Score=25.85 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=45.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc-ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP-GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
+...+++|.|+...=..+...|.+.|..|++....-. ......... +.++..+++|- -+.+.++..++.....
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADL-----SDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 4456777776665555566777788877776653211 111222223 44556666553 2567777776654443
Q ss_pred CCceeEEEEe
Q 043923 189 HLKVKGVLVT 198 (469)
Q Consensus 189 ~~~~~~vvl~ 198 (469)
..++..+|.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 3456665433
No 450
>PRK06484 short chain dehydrogenase; Validated
Probab=46.42 E-value=1.7e+02 Score=30.56 Aligned_cols=80 Identities=10% Similarity=0.133 Sum_probs=46.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..++||.|+...=..+...|.+.|..|++..-.-.......... |.++..+.+|- -|.+.+++.++...+...+
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDV-----SDEAQIREGFEQLHREFGR 79 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecc-----CCHHHHHHHHHHHHHHhCC
Confidence 34666666665555666777888887776543322233333334 66666666653 1567777777665444446
Q ss_pred eeEEEE
Q 043923 192 VKGVLV 197 (469)
Q Consensus 192 ~~~vvl 197 (469)
+..+|.
T Consensus 80 iD~li~ 85 (520)
T PRK06484 80 IDVLVN 85 (520)
T ss_pred CCEEEE
Confidence 665443
No 451
>PRK05867 short chain dehydrogenase; Provisional
Probab=46.36 E-value=2.4e+02 Score=25.92 Aligned_cols=82 Identities=10% Similarity=0.215 Sum_probs=45.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...+++|.|+...=..+...|.+.|..|++..-.-...... +... +.++..+.+|- -|.+.+++.+++..+
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDV-----SQHQQVTSMLDQVTA 82 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566766666555556667778888887754332222222 1222 45566666553 256777777665444
Q ss_pred cCCceeEEEEe
Q 043923 188 RHLKVKGVLVT 198 (469)
Q Consensus 188 ~~~~~~~vvl~ 198 (469)
...+++.+|.+
T Consensus 83 ~~g~id~lv~~ 93 (253)
T PRK05867 83 ELGGIDIAVCN 93 (253)
T ss_pred HhCCCCEEEEC
Confidence 33466655443
No 452
>PRK06179 short chain dehydrogenase; Provisional
Probab=46.12 E-value=2.1e+02 Score=26.53 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=50.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..+++|.|+...=..+...|.+.|..|++....-... .... +++++..++. |.+.++++++........
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---~~~~-~~~~~~~D~~-------d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---APIP-GVELLELDVT-------DDASVQAAVDEVIARAGR 73 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---cccC-CCeeEEeecC-------CHHHHHHHHHHHHHhCCC
Confidence 3466666655444555666778888777655332111 1112 5555544432 567778777765444445
Q ss_pred eeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 192 VKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
+..+|.+....+.|. ..+.++++++.+
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~ 102 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFD 102 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 666554433222222 245566666555
No 453
>PRK08263 short chain dehydrogenase; Provisional
Probab=45.66 E-value=2.1e+02 Score=26.72 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=48.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.......... +-.+..+.+|- -|.+.++..++...+....+
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4666655554444555667777877776543222122222222 33444555542 25567777666543333356
Q ss_pred eEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 193 KGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 193 ~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
..+|.+--....+. -.+.+++++..+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 106 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQID 106 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHH
Confidence 65554432222221 235556555544
No 454
>PRK05693 short chain dehydrogenase; Provisional
Probab=45.53 E-value=2.4e+02 Score=26.37 Aligned_cols=96 Identities=9% Similarity=0.109 Sum_probs=48.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+++|.|+...=..+...|.+.|..|++....-.... .+... +...+.+++. |.+.+++.++...+...++.
T Consensus 4 vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~-~~~~~~~Dl~-------~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALAAA-GFTAVQLDVN-------DGAALARLAEELEAEHGGLD 74 (274)
T ss_pred EEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCCC
Confidence 566655554445566667777877776554322222 12222 5554444332 45677776665444344667
Q ss_pred EEEEecCCCCCCCC--CCHHHHHHHHH
Q 043923 194 GVLVTNPSNPLGTT--MSRNELNLLVN 218 (469)
Q Consensus 194 ~vvl~~P~NPtG~~--~s~e~l~~l~~ 218 (469)
.+|.+....+.|.. .+.+++++..+
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~ 101 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFE 101 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 65544323333322 34455544333
No 455
>PRK07109 short chain dehydrogenase; Provisional
Probab=45.43 E-value=2.5e+02 Score=27.44 Aligned_cols=100 Identities=13% Similarity=0.190 Sum_probs=52.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++....-.... ..+... |.++..+++|- -|.+++++.++...+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv-----~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADV-----ADAEAVQAAADRAEE 81 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345666665555545555677788877776554322111 112233 66777777663 256777777765544
Q ss_pred cCCceeEEEEecCCCCCC--CCCCHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPLG--TTMSRNELNLL 216 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l 216 (469)
.-.++..+|.+-.....+ ...+.+++++.
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~ 112 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRV 112 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHH
Confidence 334566544332222112 12455555554
No 456
>PRK10595 SOS cell division inhibitor; Provisional
Probab=45.33 E-value=2.1e+02 Score=24.98 Aligned_cols=98 Identities=21% Similarity=0.136 Sum_probs=56.5
Q ss_pred cEEEe---CChHH-HHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE---EeeccCCCCcccCHHHHHHHHHHH
Q 043923 113 KIVLT---AGATS-ANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV---PIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 113 ~i~~t---~G~~~-al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~---~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+|+.. .|-.+ .+.=++..+...+.-|+.-.|-+..+...+... |+... .+.-.... -.+..+|++++.
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~-Gl~l~rvl~v~~~~~~---d~Lwa~EqaLrs- 104 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQAS-GLPLTKVMQLSQLSPC---HTVEAMERALRT- 104 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHc-CCCcccEEEEecCCcH---HHHHHHHHHHhh-
Confidence 45653 44444 333333334455667777788888888888776 87643 33221111 124666667665
Q ss_pred HhcCCceeEEEEec-CCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 186 QKRHLKVKGVLVTN-PSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 186 ~~~~~~~~~vvl~~-P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
....+|++- |+ .++.+++++|-..|++-+.
T Consensus 105 -----G~~~aVL~Wlp~-----~l~~~~~RRLQlAAe~g~~ 135 (164)
T PRK10595 105 -----GNYSVVLGWLPD-----ELTEEEHARLVDAAQEGNA 135 (164)
T ss_pred -----CCCcEEEECCcc-----cCCHHHHHHHHHHHHhCCC
Confidence 333345554 32 3567888888877776654
No 457
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=44.84 E-value=1.6e+02 Score=27.25 Aligned_cols=102 Identities=16% Similarity=0.111 Sum_probs=52.6
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhcCCCCEEEEccC-------CCcC-------hHHHHhhhCCCEEEEeeccCCCCccc
Q 043923 110 DTSKIVLTAGAT--SANETLMFCLAEPGEAFLLPTP-------YYPG-------FDRDLKWRTGVEIVPIQCTSLNGFQI 173 (469)
Q Consensus 110 ~~~~i~~t~G~~--~al~~~~~~l~~~gd~Vl~~~P-------~y~~-------~~~~~~~~~g~~~~~v~~~~~~~~~~ 173 (469)
+...+++|.|+. ..=..+...|...|..|++... .+.. ....+... |.++..+++|- -
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-----~ 78 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDL-----T 78 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCC-----C
Confidence 345677776652 2223344556678877776421 1110 11112333 67777777663 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecCCC-C--CCCCCCHHHHHHHHH
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSN-P--LGTTMSRNELNLLVN 218 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P~N-P--tG~~~s~e~l~~l~~ 218 (469)
|.+++++.++...+..+++.. ++.|+.. . .-...+.+++++..+
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~-li~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHI-LVNNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 567777777765444345665 4444421 1 123456666665555
No 458
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=44.67 E-value=30 Score=33.74 Aligned_cols=56 Identities=14% Similarity=0.269 Sum_probs=36.9
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
+.++..+.+..+.+|.+..+.+.+.-+ .. ..|..++.+++++|++.|+++|+-||-
T Consensus 31 KlN~lh~HltDd~~~rle~~~~P~lt~----------------~g-~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 31 KLNVFHWHLTDDQGFRIESKKYPKLQQ----------------KA-SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred CCeEEEEEEecCCCceeecCCCccccc----------------cC-CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 777777776555566654333222100 00 135679999999999999999987774
No 459
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=44.55 E-value=1.4e+02 Score=23.26 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=41.9
Q ss_pred cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 146 PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 146 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
..|...+... |.+.+.. ..++++.-....++..+. ++++||+. |+. .+-.-...+-+.|+++++
T Consensus 13 ~~~~~~~~~~-G~~~~~h--g~~~~~~~~~~~l~~~i~-------~aD~VIv~-----t~~-vsH~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 13 RRYKRILEKY-GGKLIHH--GRDGGDEKKASRLPSKIK-------KADLVIVF-----TDY-VSHNAMWKVKKAAKKYGI 76 (97)
T ss_pred HHHHHHHHHc-CCEEEEE--ecCCCCccchhHHHHhcC-------CCCEEEEE-----eCC-cChHHHHHHHHHHHHcCC
Confidence 3455666666 8888777 222333333334666654 56776654 332 355567778889999998
Q ss_pred EEEE
Q 043923 226 HLIS 229 (469)
Q Consensus 226 ~iI~ 229 (469)
.++.
T Consensus 77 p~~~ 80 (97)
T PF10087_consen 77 PIIY 80 (97)
T ss_pred cEEE
Confidence 8764
No 460
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=44.34 E-value=2.7e+02 Score=25.99 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=45.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....+++|.|+...=..+...|.+.|..|++....-...... +... |.++..+.+|- .|.+.+...++...
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 82 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADV-----LDKESLEQARQQIL 82 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 344566666655554666677778888877765432222111 2222 55666666653 24566666665544
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
....++..+|.+
T Consensus 83 ~~~g~id~li~~ 94 (278)
T PRK08277 83 EDFGPCDILING 94 (278)
T ss_pred HHcCCCCEEEEC
Confidence 333456655443
No 461
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=43.58 E-value=2.6e+02 Score=25.63 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=46.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....+++|.|+...=..+...|.+.|-.|++....-..... .+... |.++..+.+|- -|.+.+++.++...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 82 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDV-----TDHDAVRAAIDAFE 82 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccC-----CCHHHHHHHHHHHH
Confidence 34467777665555555666777788888776533221111 12223 55676676653 25677777776554
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
....+.+.+|.+
T Consensus 83 ~~~~~~d~li~~ 94 (255)
T PRK07523 83 AEIGPIDILVNN 94 (255)
T ss_pred HhcCCCCEEEEC
Confidence 433456654443
No 462
>PRK08278 short chain dehydrogenase; Provisional
Probab=43.43 E-value=2.8e+02 Score=25.93 Aligned_cols=81 Identities=11% Similarity=0.150 Sum_probs=45.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-------h---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-------F---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEA 181 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-------~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 181 (469)
..+++|.|+...=..+...|.+.|..|++....... . ...+... +.+++.+.+|- -+.+.+++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~ 80 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDV-----RDEDQVAAA 80 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHH
Confidence 456676666655555666677888877766543321 1 1112223 55666666653 256777777
Q ss_pred HHHHHhcCCceeEEEEe
Q 043923 182 YQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 182 i~~~~~~~~~~~~vvl~ 198 (469)
+++..+.-.++..+|.+
T Consensus 81 ~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 81 VAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 76543333466765544
No 463
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=43.15 E-value=2.4e+02 Score=25.73 Aligned_cols=81 Identities=10% Similarity=0.150 Sum_probs=44.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..+++|.|+...=..+...|.+.|..|++. ...-.... ..++.. +.++..+.+|- -|.+.+...+++...
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANV-----GDVEKIKEMFAQIDE 78 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 346676666555555667777888776652 21111111 112223 56666666653 256777777766544
Q ss_pred cCCceeEEEEe
Q 043923 188 RHLKVKGVLVT 198 (469)
Q Consensus 188 ~~~~~~~vvl~ 198 (469)
...+++.+|.+
T Consensus 79 ~~~~id~vi~~ 89 (250)
T PRK08063 79 EFGRLDVFVNN 89 (250)
T ss_pred HcCCCCEEEEC
Confidence 33356665544
No 464
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=42.89 E-value=2.7e+02 Score=25.51 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=39.5
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..++.|- -|.+.++..++...+...++.
T Consensus 3 vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDV-----RNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 455544443333445566678877776543221122222222 44555555542 255677776665443334566
Q ss_pred EEEEe
Q 043923 194 GVLVT 198 (469)
Q Consensus 194 ~vvl~ 198 (469)
.++.+
T Consensus 77 ~vi~~ 81 (248)
T PRK10538 77 VLVNN 81 (248)
T ss_pred EEEEC
Confidence 65543
No 465
>PRK06128 oxidoreductase; Provisional
Probab=42.89 E-value=3e+02 Score=26.16 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=54.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc--C---hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP--G---FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~--~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
...++||.|+...=..+...|.+.|..|++....-. . ....+... |.++..+++|- -|.+.+++.+++.
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~ 128 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDL-----KDEAFCRQLVERA 128 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCC-----CCHHHHHHHHHHH
Confidence 345777777665556666777788887776432111 0 11122233 66676676653 2567777777654
Q ss_pred HhcCCceeEEEEecCCC--CCC--CCCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSN--PLG--TTMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~N--PtG--~~~s~e~l~~l~~ 218 (469)
.+...++..+| .|... +.+ .-++.+++++..+
T Consensus 129 ~~~~g~iD~lV-~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 129 VKELGGLDILV-NIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHHhCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHH
Confidence 44334566544 43321 111 1245666666555
No 466
>PRK12743 oxidoreductase; Provisional
Probab=42.73 E-value=2.1e+02 Score=26.32 Aligned_cols=80 Identities=14% Similarity=0.072 Sum_probs=44.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPT-PYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.+++|.|+...=..+...|.+.|..|++.. ..-.... ..+... |.++..+.+|- -|.+.++..+++..+.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDL-----SDLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 466766666555666777888898886642 2221111 122223 55666666552 2567777777665444
Q ss_pred CCceeEEEEe
Q 043923 189 HLKVKGVLVT 198 (469)
Q Consensus 189 ~~~~~~vvl~ 198 (469)
..+++.++.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 4456665544
No 467
>PRK06114 short chain dehydrogenase; Provisional
Probab=42.60 E-value=2.7e+02 Score=25.55 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=45.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc-ChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP-GFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~-~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++...+++|.|+...=..+...|.+.|..|++....-. .... .+... +.++..+++|- -|.+.+++.+++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~i~~~~~~ 79 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADV-----TSKADLRAAVAR 79 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHH
Confidence 33445677766665555666677788877776653221 1121 22223 55566666553 256777777766
Q ss_pred HHhcCCceeEEEE
Q 043923 185 AQKRHLKVKGVLV 197 (469)
Q Consensus 185 ~~~~~~~~~~vvl 197 (469)
......+.+.+|.
T Consensus 80 ~~~~~g~id~li~ 92 (254)
T PRK06114 80 TEAELGALTLAVN 92 (254)
T ss_pred HHHHcCCCCEEEE
Confidence 5443345665443
No 468
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=42.46 E-value=2.4e+02 Score=24.76 Aligned_cols=84 Identities=17% Similarity=0.081 Sum_probs=49.1
Q ss_pred hcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec-cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCCC
Q 043923 131 LAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC-TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTTM 208 (469)
Q Consensus 131 l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~~ 208 (469)
+...+.-++.-.|-+..+...+... |++...+-. ..... .-.+..+|++++. .....|++- |+ .+
T Consensus 56 Ls~~~Rwlv~IaPP~~~~~~~L~~~-Gl~l~rvlli~~~~~-~d~lwa~EQaLrS------G~c~aVL~WLp~-----~l 122 (168)
T TIGR00623 56 LGQQSRWQLWLTPQQKLSKEWVQSS-GLPLTKVMQISQLSP-CNTVESMIRALRT------GNYSVVIGWLTD-----EL 122 (168)
T ss_pred hcccCceEEEECCCCccCHHHHHHc-CCChhHEEEEecCCc-hhHHHHHHHHHHh------CCCcEEEecCCc-----cC
Confidence 4445566666667666777777766 886544321 11110 1135777888776 444455554 42 36
Q ss_pred CHHHHHHHHHHHHhcCeEE
Q 043923 209 SRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 209 s~e~l~~l~~~~~~~~~~i 227 (469)
+.+++++|--.++.-+.+.
T Consensus 123 ~~~~lRRLqlAA~~G~al~ 141 (168)
T TIGR00623 123 TEEEHAKLVRAAEEGNAMG 141 (168)
T ss_pred CHHHHHHHHHHHHhCCCeE
Confidence 7788888887777665433
No 469
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=42.25 E-value=1.3e+02 Score=28.92 Aligned_cols=50 Identities=10% Similarity=0.035 Sum_probs=31.6
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
..+|.+.+++.++..... .++.++++ -++--+..+|.+|++++++.+.+.
T Consensus 16 g~iD~~~l~~l~~~l~~~--Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~ 65 (289)
T cd00951 16 GSFDEDAYRAHVEWLLSY--GAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEE 65 (289)
T ss_pred CCcCHHHHHHHHHHHHHc--CCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHH
Confidence 467888888777654432 45554433 343445667888888888766654
No 470
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=42.17 E-value=1.4e+02 Score=27.76 Aligned_cols=83 Identities=13% Similarity=0.133 Sum_probs=42.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.+.+.+++..+...
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDV-----RSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEecc-----CCHHHHHHHHHHHHHHhC
Confidence 445666666555444566677788988887643222112211222 44555555542 245666666655433333
Q ss_pred ceeEEEEecC
Q 043923 191 KVKGVLVTNP 200 (469)
Q Consensus 191 ~~~~vvl~~P 200 (469)
++..+ ++|.
T Consensus 79 ~id~l-i~~A 87 (262)
T TIGR03325 79 KIDCL-IPNA 87 (262)
T ss_pred CCCEE-EECC
Confidence 56654 4443
No 471
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=42.08 E-value=70 Score=29.84 Aligned_cols=54 Identities=11% Similarity=0.311 Sum_probs=37.1
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
++.+.+.+.++.... +.++++|. +|.+.+.+.++.+.++.++++..+|+|-+..
T Consensus 43 ~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~ 96 (246)
T PF08543_consen 43 VDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMG 96 (246)
T ss_dssp --HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---E
T ss_pred CCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEecccc
Confidence 456777777776543 44677666 7999999999999999988899999998775
No 472
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=42.02 E-value=1.4e+02 Score=27.60 Aligned_cols=84 Identities=19% Similarity=0.259 Sum_probs=44.5
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 110 DTSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 110 ~~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
....+++|.|+ ...=..+...|.+.|..|++.... ......+....+.++..+++|- -|.+++++.++....
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHH
Confidence 34456676665 344455566777889888876432 1122222222133455555552 256777777766544
Q ss_pred cCCceeEEEEecC
Q 043923 188 RHLKVKGVLVTNP 200 (469)
Q Consensus 188 ~~~~~~~vvl~~P 200 (469)
...+... +++|.
T Consensus 80 ~~g~iD~-lv~nA 91 (252)
T PRK06079 80 RVGKIDG-IVHAI 91 (252)
T ss_pred HhCCCCE-EEEcc
Confidence 3345665 44444
No 473
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=41.96 E-value=1.2e+02 Score=29.05 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=29.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
+..+|.+.+++.++...+. .++.++++ -++--+..++.+|++++++.+.+
T Consensus 16 dg~iD~~~l~~~i~~l~~~--Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~ 65 (292)
T PRK03170 16 DGSVDFAALRKLVDYLIAN--GTDGLVVV-GTTGESPTLTHEEHEELIRAVVE 65 (292)
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-CcCCccccCCHHHHHHHHHHHHH
Confidence 3457777777777654432 45555542 33334456777777777776655
No 474
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=41.58 E-value=1.3e+02 Score=27.91 Aligned_cols=82 Identities=9% Similarity=0.034 Sum_probs=43.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.++..+++..+..
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDV-----TSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHhc
Confidence 3445666666555555566677788877776543322222222222 43445555542 25566777766554433
Q ss_pred CceeEEEE
Q 043923 190 LKVKGVLV 197 (469)
Q Consensus 190 ~~~~~vvl 197 (469)
.++..+|.
T Consensus 79 g~id~li~ 86 (263)
T PRK06200 79 GKLDCFVG 86 (263)
T ss_pred CCCCEEEE
Confidence 45665443
No 475
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=41.36 E-value=1.3e+02 Score=28.72 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=33.3
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
..|+++ +..+|.+.+++.++..... .++.++++ -+.=-+..++.+|++++++.+.+.
T Consensus 9 ~TPf~~--dg~iD~~~~~~~i~~l~~~--Gv~gl~v~-GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 9 VTPFKD--DGSVDFDALERLIEFQIEN--GTDGLVVC-GTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcchhhCCHHHHHHHHHHHHHH
Confidence 334443 3467777777777654432 45555543 222234567788888887766654
No 476
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=41.35 E-value=2.6e+02 Score=25.43 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=45.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...+++|.|+...=..+...|...|..|++... .-.... ..+... +.++..+++|- -|.+.+.+.+++..
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 79 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADV-----SKVEDANRLVEEAV 79 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 345666666555555566667778888765321 111111 112223 56677777663 25677777776654
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
...++++.|+.+
T Consensus 80 ~~~~~id~vi~~ 91 (247)
T PRK12935 80 NHFGKVDILVNN 91 (247)
T ss_pred HHcCCCCEEEEC
Confidence 444467766654
No 477
>PRK08226 short chain dehydrogenase; Provisional
Probab=40.98 E-value=2.9e+02 Score=25.42 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=45.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...+++|.|+...=..+...|.+.|..|++....-. .... .... +.++..+.+|- -+.++++..++....
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 78 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADV-----RDPASVAAAIKRAKE 78 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 345677766665555666777788887777654321 1111 2222 55565666553 145667776665544
Q ss_pred cCCceeEEEEe
Q 043923 188 RHLKVKGVLVT 198 (469)
Q Consensus 188 ~~~~~~~vvl~ 198 (469)
.-.+++.++.+
T Consensus 79 ~~~~id~vi~~ 89 (263)
T PRK08226 79 KEGRIDILVNN 89 (263)
T ss_pred HcCCCCEEEEC
Confidence 34456765544
No 478
>PRK07856 short chain dehydrogenase; Provisional
Probab=40.74 E-value=2.9e+02 Score=25.31 Aligned_cols=98 Identities=10% Similarity=0.094 Sum_probs=50.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....+++|.|+...=..+...|.+.|..|++....-.. ... +.++..+++|- -|.+.+++.++...+..
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVD-GRPAEFHAADV-----RDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhc-CCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 34456666665554455666777788777766433211 122 44454555442 25567777776554444
Q ss_pred CceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
+++..+|.+-...+.+. ..+.+++++..+
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 104 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVE 104 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 46676554432222222 234455544443
No 479
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=40.62 E-value=50 Score=33.98 Aligned_cols=78 Identities=15% Similarity=0.261 Sum_probs=45.7
Q ss_pred HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce--eEEEE----ecC--CCCCCCCCCHHHHHHHHHHHHh
Q 043923 151 DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV--KGVLV----TNP--SNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~--~~vvl----~~P--~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.+... ++++..+.+..+.+|.+.++.+.+.-+....++... ...+. ..| ..+.+-.++.+|+++|++.|++
T Consensus 30 ~ma~~-K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~ 108 (445)
T cd06569 30 QMAAY-KLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKA 108 (445)
T ss_pred HHHHh-CCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHH
Confidence 34444 888888888766778877665553322100000000 00011 112 1234668999999999999999
Q ss_pred cCeEEEE
Q 043923 223 KNIHLIS 229 (469)
Q Consensus 223 ~~~~iI~ 229 (469)
+|+-||-
T Consensus 109 rgI~VIP 115 (445)
T cd06569 109 RHIEVIP 115 (445)
T ss_pred cCCEEEE
Confidence 9988764
No 480
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=40.55 E-value=1.7e+02 Score=27.89 Aligned_cols=55 Identities=16% Similarity=0.283 Sum_probs=38.0
Q ss_pred cCHHHHHHHHHHHHhcC--CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc-----CeEEEEecccc
Q 043923 173 ITETAIEEAYQLAQKRH--LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK-----NIHLISDEIYS 234 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~--~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~-----~~~iI~Deay~ 234 (469)
++.+.+++.++.....+ .++++|. +|.+.+.+..+.++++++++ +..+|+|-+..
T Consensus 68 ~~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~ 129 (281)
T PRK08176 68 IPDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIG 129 (281)
T ss_pred CCHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccc
Confidence 34566777776554332 1556555 78888999889999988763 67788888764
No 481
>PRK06484 short chain dehydrogenase; Validated
Probab=40.53 E-value=2.2e+02 Score=29.67 Aligned_cols=79 Identities=20% Similarity=0.242 Sum_probs=42.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.+++.++...+...++
T Consensus 271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADI-----TDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3455555544444555667788877777654322222223333 55665566553 25677777776554443456
Q ss_pred eEEEE
Q 043923 193 KGVLV 197 (469)
Q Consensus 193 ~~vvl 197 (469)
..+|.
T Consensus 345 d~li~ 349 (520)
T PRK06484 345 DVLVN 349 (520)
T ss_pred CEEEE
Confidence 65443
No 482
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.22 E-value=2.7e+02 Score=25.08 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=42.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhC-CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT-GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
...|++|.|+...=..+.+.|.+.|..|++....-........... ...+..+++|- .+.+.+++.+++.....
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDV-----SSTESARNVIEKAAKVL 79 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 4467777665555555667777889888876654322222112110 11344455442 24566766665433222
Q ss_pred CceeEEEEec
Q 043923 190 LKVKGVLVTN 199 (469)
Q Consensus 190 ~~~~~vvl~~ 199 (469)
.....++.+.
T Consensus 80 ~~id~ii~~a 89 (238)
T PRK05786 80 NAIDGLVVTV 89 (238)
T ss_pred CCCCEEEEcC
Confidence 2455555543
No 483
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=40.10 E-value=1.1e+02 Score=30.11 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=50.1
Q ss_pred CCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 144 YYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 144 ~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
.|++|...++.. .++++.++....- ..+.+..++. +-|.|++.-| .+++.+|.++|++.|++.
T Consensus 60 ~y~syEeLakd~-~vDvVyi~~~~~q----H~evv~l~l~-------~~K~VL~EKP-----la~n~~e~~~iveaA~~r 122 (351)
T KOG2741|consen 60 AYGSYEELAKDP-EVDVVYISTPNPQ----HYEVVMLALN-------KGKHVLCEKP-----LAMNVAEAEEIVEAAEAR 122 (351)
T ss_pred cccCHHHHhcCC-CcCEEEeCCCCcc----HHHHHHHHHH-------cCCcEEeccc-----ccCCHHHHHHHHHHHHHc
Confidence 588898888876 8899988865321 2333444443 3344666544 357889999999999998
Q ss_pred CeEEEEecccc
Q 043923 224 NIHLISDEIYS 234 (469)
Q Consensus 224 ~~~iI~Deay~ 234 (469)
| .++.|..|.
T Consensus 123 g-v~~meg~~~ 132 (351)
T KOG2741|consen 123 G-VFFMEGLWW 132 (351)
T ss_pred C-cEEEeeeee
Confidence 8 666777664
No 484
>PRK12937 short chain dehydrogenase; Provisional
Probab=40.10 E-value=2.9e+02 Score=25.05 Aligned_cols=83 Identities=11% Similarity=0.125 Sum_probs=46.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPT-PYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...+++|.|+...=..+...|.+.|-.|++.. ..-... ...+... +.++..+++|- -|.+.+++.++..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~ 77 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADV-----ADAAAVTRLFDAA 77 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHH
Confidence 345677777766666666677777887665432 111111 1112223 56666666653 2567777777665
Q ss_pred HhcCCceeEEEEe
Q 043923 186 QKRHLKVKGVLVT 198 (469)
Q Consensus 186 ~~~~~~~~~vvl~ 198 (469)
.....++..++.+
T Consensus 78 ~~~~~~id~vi~~ 90 (245)
T PRK12937 78 ETAFGRIDVLVNN 90 (245)
T ss_pred HHHcCCCCEEEEC
Confidence 4434456765544
No 485
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=40.05 E-value=1e+02 Score=30.04 Aligned_cols=104 Identities=18% Similarity=0.287 Sum_probs=57.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---hCC--CEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---RTG--VEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+.+|++|.|+-=.=..+...|++.|+.|++-+.....+..+.+. ..+ -.+..+..|- .|.+.|++.....
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl-----~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDL-----NDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEecc-----CCHHHHHHHHhhc
Confidence 35688888854444445556678898888877755555444332 112 3333333321 3678888877653
Q ss_pred HhcCCceeEEE-----------EecC-----CCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 186 QKRHLKVKGVL-----------VTNP-----SNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 186 ~~~~~~~~~vv-----------l~~P-----~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
+...|+ +.+| +|-.|.+ .+++.|++||..=++=-
T Consensus 77 -----~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtl-------nlLe~~~~~~~~~~V~s 126 (343)
T KOG1371|consen 77 -----KFDAVMHFAALAAVGESMENPLSYYHNNIAGTL-------NLLEVMKAHNVKALVFS 126 (343)
T ss_pred -----CCceEEeehhhhccchhhhCchhheehhhhhHH-------HHHHHHHHcCCceEEEe
Confidence 333332 2233 3334432 47788888875555443
No 486
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=39.96 E-value=42 Score=33.40 Aligned_cols=74 Identities=15% Similarity=0.212 Sum_probs=44.7
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC-----CCCCCCCCCHHHHHHHHHHHHhcCeE
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP-----SNPLGTTMSRNELNLLVNIITEKNIH 226 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-----~NPtG~~~s~e~l~~l~~~~~~~~~~ 226 (469)
+... +.++..+.+..+.+|.+.++.+.+. ++. +.....-...+| ..|.|..++.+|+++|++.|+++|+-
T Consensus 27 ma~~-K~N~lhlHltDdq~~rle~~~~P~L-t~~---ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~ 101 (357)
T cd06563 27 MALY-KLNVFHWHLTDDQGWRIEIKKYPKL-TEV---GAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGIT 101 (357)
T ss_pred HHHh-ccceEEEeeecCCCceecccCcchh-hhc---ccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCE
Confidence 4444 7888888876666777765554432 110 000000000011 23557789999999999999999988
Q ss_pred EEEe
Q 043923 227 LISD 230 (469)
Q Consensus 227 iI~D 230 (469)
||--
T Consensus 102 VIPE 105 (357)
T cd06563 102 VIPE 105 (357)
T ss_pred EEEe
Confidence 8754
No 487
>PRK08643 acetoin reductase; Validated
Probab=39.95 E-value=3e+02 Score=25.23 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=50.1
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
+++|.|+...=..+...|.+.|..|++..-.-...... +... +.++..+.+|- -|.+.+++.+.+......
T Consensus 5 ~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADV-----SDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 55655554444455566777887776654221111111 2222 45666666553 256777777766544444
Q ss_pred ceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
+++.+|.+....+.+. ..+.+++++..+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 108 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYN 108 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6776665543223222 234455554443
No 488
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=39.86 E-value=73 Score=28.03 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=27.1
Q ss_pred HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC
Q 043923 151 DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP 200 (469)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P 200 (469)
.++.. |.++..+.+|- -|.+++.+.++......+++..||.+..
T Consensus 47 ~l~~~-g~~v~~~~~Dv-----~d~~~v~~~~~~~~~~~~~i~gVih~ag 90 (181)
T PF08659_consen 47 ELESA-GARVEYVQCDV-----TDPEAVAAALAQLRQRFGPIDGVIHAAG 90 (181)
T ss_dssp HHHHT-T-EEEEEE--T-----TSHHHHHHHHHTSHTTSS-EEEEEE---
T ss_pred HHHhC-CCceeeeccCc-----cCHHHHHHHHHHHHhccCCcceeeeeee
Confidence 34445 89999888873 3778999988876655567888776644
No 489
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=39.76 E-value=3e+02 Score=25.24 Aligned_cols=81 Identities=12% Similarity=0.021 Sum_probs=44.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---hhCC-CEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---WRTG-VEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.+++|.|+...=..+...|.+.|..|++............. ...+ .++..+++|-. |.+++..++++....
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-----SEQSVLALSRGVDEI 78 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 36777766655555666777788777766544332222221 1112 45666666532 557777777655443
Q ss_pred CCceeEEEEe
Q 043923 189 HLKVKGVLVT 198 (469)
Q Consensus 189 ~~~~~~vvl~ 198 (469)
..+++.++.+
T Consensus 79 ~~~id~vv~~ 88 (259)
T PRK12384 79 FGRVDLLVYN 88 (259)
T ss_pred cCCCCEEEEC
Confidence 3456665544
No 490
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=39.73 E-value=3e+02 Score=25.20 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=53.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....+++|.|+...=..+...|.+.|..|++..-.-...... +... +.++..+++|- -|.+.+++.++...
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 81 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNV-----THKQEVEAAIEHIE 81 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCC-----CCHHHHHHHHHHHH
Confidence 344577777666555666677778888777754322111111 1222 45666666653 25577777766544
Q ss_pred hcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
....+...++.+-...+.+ ...+.+++++..+
T Consensus 82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 115 (254)
T PRK08085 82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIA 115 (254)
T ss_pred HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4334566655442221111 1235566555544
No 491
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=39.72 E-value=1.1e+02 Score=29.08 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=31.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++...+. .++.++++ -+.--+..++.+|++++++.+.+.
T Consensus 12 dg~iD~~~~~~~i~~l~~~--Gv~gi~~~-GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 12 DGEVDLDALRRLVEFLIEA--GVDGLVVL-GTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcccccCCHHHHHHHHHHHHHH
Confidence 3467888888777654433 45554432 343345667888888888766653
No 492
>PRK07791 short chain dehydrogenase; Provisional
Probab=39.63 E-value=3.3e+02 Score=25.71 Aligned_cols=83 Identities=10% Similarity=0.019 Sum_probs=45.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC---------cChHHH---HhhhCCCEEEEeeccCCCCcccCHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY---------PGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAI 178 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y---------~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l 178 (469)
...++||.|+...=..+...|.+.|..|++..... ...... +... |.++..+++|- -|.+++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~v 79 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDI-----ADWDGA 79 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCC-----CCHHHH
Confidence 34566666666555566667778887777654222 111111 2222 55666666653 256777
Q ss_pred HHHHHHHHhcCCceeEEEEecC
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNP 200 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P 200 (469)
++.++.......++..+| +|.
T Consensus 80 ~~~~~~~~~~~g~id~lv-~nA 100 (286)
T PRK07791 80 ANLVDAAVETFGGLDVLV-NNA 100 (286)
T ss_pred HHHHHHHHHhcCCCCEEE-ECC
Confidence 777766544434666544 444
No 493
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=39.49 E-value=95 Score=26.07 Aligned_cols=59 Identities=14% Similarity=0.244 Sum_probs=41.7
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhc--Ce-EEEEeccccc
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEK--NI-HLISDEIYSG 235 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~--~~-~iI~Deay~~ 235 (469)
..+++.+.+.+++. ++..+|+-.|-|..|..-+ ....+++++.+++. ++ +..+||-|..
T Consensus 37 ~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 46789999998875 8899999999888887544 33445666655443 54 5678998863
No 494
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=39.33 E-value=3.5e+02 Score=25.84 Aligned_cols=116 Identities=18% Similarity=0.263 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEcc--CCCcChHH--HHhhhCCCEEEEe
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGE--AFLLPT--PYYPGFDR--DLKWRTGVEIVPI 163 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd--~Vl~~~--P~y~~~~~--~~~~~~g~~~~~v 163 (469)
+..+.|+++-.+. +....+++|.|.+.....++....+.|. +|++.+ |.+.+..- .+... |+.+..+
T Consensus 94 ~~~~~I~~~a~~~------I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~-GI~vtlI 166 (275)
T PRK08335 94 EAKREIGNIGSEL------IDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFL-GIEFEVI 166 (275)
T ss_pred HHHHHHHHHHHHH------cCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHC-CCCEEEE
Confidence 3444455544332 3455577777755544445455444553 455543 55444322 23334 7777666
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe-cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~-~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
+-. .+-..+. ++..|++. .---..|.+.++----.++-.|+.|++.+++
T Consensus 167 ~Ds----------a~~~~m~-------~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 167 TDA----------QLGLFAK-------EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred ecc----------HHHHHHH-------hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 521 1222222 45555542 1122334444333333477788899988776
No 495
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=39.01 E-value=2.2e+02 Score=26.92 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=53.1
Q ss_pred cEEEeCCh----HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGA----TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~----~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.|++..|+ -.++...+.++...-+.|-+..|.- ....+... +-+++..+++. ..+.++..+.
T Consensus 26 ~vliiaGs~~~~GA~ila~l~~~~~g~~~v~~~~~~~--~~~~i~~~-~pe~~~~~~~~------~~~~~~~~~~----- 91 (272)
T TIGR00196 26 RVLIIGGSDDYSGAPLLAALAALRAGAGLVTVAAPEN--VITLINSV-SPELIVHRLGW------KVDEDEELLE----- 91 (272)
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEEchh--hHHHHhhc-CCEEEEecchh------hHHHHHhhhc-----
Confidence 46666664 2455555566544334555555542 12233334 66666655431 2334443332
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
..+++++ ++.-|++.. ..++++.+++++..+|+|.
T Consensus 92 --~~davvi-g~Gl~~~~~-----~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 92 --RYDVVVI-GPGLGQDPS-----FKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred --cCCEEEE-cCCCCCCHH-----HHHHHHHHHhcCCCEEEEh
Confidence 4455444 555554433 6678888888999999995
No 496
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=38.91 E-value=1.9e+02 Score=26.33 Aligned_cols=90 Identities=10% Similarity=0.178 Sum_probs=54.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++...|++..||..|...+ ..|++.|..|.+-.|...+ +....... ++..+. +. .+.+.+.
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~-~i~~~~------~~--~~~~~~~-------- 71 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEG-KIKWIE------RE--FDAEDLD-------- 71 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhc-Ccchhh------cc--cChhhhc--------
Confidence 4556799999999999877 5677889999999998832 33323322 322221 12 2333332
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
...+|+.+.+ +.+.=+++.+.|+++++++
T Consensus 72 ---~~~lviaAt~--------d~~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 72 ---DAFLVIAATD--------DEELNERIAKAARERRILV 100 (210)
T ss_pred ---CceEEEEeCC--------CHHHHHHHHHHHHHhCCce
Confidence 3445555422 2244578999999988655
No 497
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=38.86 E-value=2.3e+02 Score=27.53 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=55.6
Q ss_pred CCCcEEEeCChH--------HHHHHHHHHhcCCC--CEEEEc--cCCCcC-h--HHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 110 DTSKIVLTAGAT--------SANETLMFCLAEPG--EAFLLP--TPYYPG-F--DRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 110 ~~~~i~~t~G~~--------~al~~~~~~l~~~g--d~Vl~~--~P~y~~-~--~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
....+++|.|.+ .....++....+.| -.|++. .|.+.+ . ...+... |+++..++-
T Consensus 117 ~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~-gI~vtlI~D--------- 186 (303)
T TIGR00524 117 KDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQD-GIDVTLITD--------- 186 (303)
T ss_pred cCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHC-CCCEEEECh---------
Confidence 345578887755 22222333333333 345554 466555 2 2333444 877766651
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEe-cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe-cccc
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNIITEKNIHLISD-EIYS 234 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~-~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D-eay~ 234 (469)
..+-..+.. .++..|++. .--...|.++++----.++-.|+.+++.+++= |.|-
T Consensus 187 -sa~~~~m~~-----~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~a~s~K 242 (303)
T TIGR00524 187 -SMAAYFMQK-----GEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVAAPLST 242 (303)
T ss_pred -hHHHHHccc-----cCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEeccccc
Confidence 222333221 145555553 22334555555444455777888898887764 4443
No 498
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=38.84 E-value=1.2e+02 Score=25.78 Aligned_cols=56 Identities=21% Similarity=0.132 Sum_probs=40.2
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHH-HHHHHHHHHHh-cCe-EEEEeccc
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRN-ELNLLVNIITE-KNI-HLISDEIY 233 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e-~l~~l~~~~~~-~~~-~iI~Deay 233 (469)
.+++.+.+.+.++ ++..|++-.|.|..|...+.. ..+++++..++ .++ ++..||-.
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERl 98 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERL 98 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 4788888888876 888999999999999887744 35666665554 343 34556654
No 499
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=38.47 E-value=2.3e+02 Score=27.43 Aligned_cols=84 Identities=15% Similarity=0.213 Sum_probs=42.4
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE-eCChHHHHHHHHHHhcCCCCEEEEccC-CCcC-hHHHHh
Q 043923 77 RELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL-TAGATSANETLMFCLAEPGEAFLLPTP-YYPG-FDRDLK 153 (469)
Q Consensus 77 ~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~-~~~~~~ 153 (469)
..+..|.|. | ..+..+|.++-+..-..-.+.+...++ .+++.-+|.+++-+-. .|-++++..| +.+. ....++
T Consensus 30 ~KlE~~NP~-g--SvKDR~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~ 105 (300)
T COG0031 30 AKLESFNPG-G--SVKDRIALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLR 105 (300)
T ss_pred EEhhhcCCC-C--chhHHHHHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHH
Confidence 344455554 4 555666665433211001245554443 4444446666655543 3443333333 4443 344455
Q ss_pred hhCCCEEEEeec
Q 043923 154 WRTGVEIVPIQC 165 (469)
Q Consensus 154 ~~~g~~~~~v~~ 165 (469)
.. |++++.+|-
T Consensus 106 a~-GAevi~t~~ 116 (300)
T COG0031 106 AL-GAEVILTPG 116 (300)
T ss_pred Hc-CCEEEEcCC
Confidence 55 999999986
No 500
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=38.44 E-value=1.4e+02 Score=30.15 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=37.8
Q ss_pred cccCHHHHHHHHHHH-HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 171 FQITETAIEEAYQLA-QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~-~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
..++.+++++..++. ...+.++.+|++-+|| +|.+|+++|+++++.++
T Consensus 268 i~i~~~dl~~~~~~l~~~~~~~~D~V~lGcPH------~S~~El~~ia~ll~gr~ 316 (400)
T PF04412_consen 268 ITITDADLEEVYEELNTAGDEKVDLVALGCPH------LSLEELREIAELLEGRK 316 (400)
T ss_pred EEeCHHHHHHHHHHhccCCCCCCCEEEECCCC------CCHHHHHHHHHHHhCCC
Confidence 456678888877765 2344588999999999 79999999999998764
Done!