Query 043923
Match_columns 469
No_of_seqs 224 out of 2656
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:30:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 7E-58 2.4E-62 467.5 43.4 432 1-433 1-434 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 4.7E-55 1.6E-59 445.6 46.5 427 3-431 1-427 (428)
3 1b5p_A Protein (aspartate amin 100.0 4.1E-48 1.4E-52 388.9 31.7 350 38-429 31-383 (385)
4 3tcm_A Alanine aminotransferas 100.0 4.6E-47 1.6E-51 393.9 36.2 379 38-433 95-496 (500)
5 3k7y_A Aspartate aminotransfer 100.0 3.6E-47 1.2E-51 383.5 31.8 372 3-430 1-404 (405)
6 3jtx_A Aminotransferase; NP_28 100.0 6.8E-46 2.3E-50 373.6 36.5 352 36-428 28-395 (396)
7 3b46_A Aminotransferase BNA3; 100.0 1.4E-46 4.7E-51 385.3 31.9 359 37-426 56-442 (447)
8 3aow_A Putative uncharacterize 100.0 2.3E-45 7.7E-50 376.2 38.8 361 38-433 76-447 (448)
9 2x5d_A Probable aminotransfera 100.0 4.3E-46 1.5E-50 377.5 33.0 361 37-433 36-400 (412)
10 2o1b_A Aminotransferase, class 100.0 5.1E-46 1.7E-50 376.1 33.0 353 38-431 47-403 (404)
11 1gd9_A Aspartate aminotransfer 100.0 1.1E-45 3.8E-50 371.3 34.5 358 38-432 26-387 (389)
12 3h14_A Aminotransferase, class 100.0 6.1E-46 2.1E-50 373.6 32.0 357 37-441 30-391 (391)
13 3fvs_A Kynurenine--oxoglutarat 100.0 4.2E-46 1.4E-50 378.5 31.0 363 38-430 28-421 (422)
14 3dyd_A Tyrosine aminotransfera 100.0 1.1E-45 3.7E-50 376.4 33.7 360 38-433 54-426 (427)
15 3e2y_A Kynurenine-oxoglutarate 100.0 7.8E-46 2.7E-50 375.0 32.0 358 38-426 23-408 (410)
16 3ihj_A Alanine aminotransferas 100.0 2.8E-45 9.7E-50 380.0 35.0 350 79-433 122-495 (498)
17 2r2n_A Kynurenine/alpha-aminoa 100.0 2E-45 6.8E-50 374.3 31.5 329 79-431 71-424 (425)
18 1yiz_A Kynurenine aminotransfe 100.0 5E-45 1.7E-49 371.6 33.6 364 38-430 37-428 (429)
19 3fdb_A Beta C-S lyase, putativ 100.0 4.8E-45 1.6E-49 364.9 32.6 349 37-431 22-376 (377)
20 2dou_A Probable N-succinyldiam 100.0 4.2E-45 1.4E-49 365.6 31.3 348 37-428 24-375 (376)
21 3ezs_A Aminotransferase ASPB; 100.0 8.4E-45 2.9E-49 363.1 33.3 345 39-431 24-375 (376)
22 3dzz_A Putative pyridoxal 5'-p 100.0 1E-44 3.5E-49 364.1 33.5 357 38-432 27-390 (391)
23 3ele_A Amino transferase; RER0 100.0 9.7E-45 3.3E-49 365.6 33.3 347 38-432 35-397 (398)
24 1c7n_A Cystalysin; transferase 100.0 6.2E-45 2.1E-49 367.1 31.9 359 37-433 30-395 (399)
25 3qgu_A LL-diaminopimelate amin 100.0 3.6E-45 1.2E-49 374.9 30.4 355 37-433 68-442 (449)
26 3kax_A Aminotransferase, class 100.0 9.6E-45 3.3E-49 363.3 32.8 352 38-428 24-382 (383)
27 1j32_A Aspartate aminotransfer 100.0 9.9E-45 3.4E-49 364.3 32.8 354 38-431 30-387 (388)
28 1bw0_A TAT, protein (tyrosine 100.0 1.3E-44 4.5E-49 366.9 33.6 365 36-433 31-415 (416)
29 1u08_A Hypothetical aminotrans 100.0 1.2E-44 3.9E-49 363.7 32.1 349 39-426 31-385 (386)
30 1o4s_A Aspartate aminotransfer 100.0 2.9E-44 9.8E-49 361.4 34.1 345 38-430 41-388 (389)
31 2o0r_A RV0858C (N-succinyldiam 100.0 1.3E-44 4.3E-49 366.6 30.9 357 39-433 26-398 (411)
32 3nra_A Aspartate aminotransfer 100.0 1.6E-44 5.6E-49 364.7 30.7 359 37-432 38-406 (407)
33 3get_A Histidinol-phosphate am 100.0 5.2E-44 1.8E-48 356.0 33.6 332 38-428 30-364 (365)
34 1d2f_A MALY protein; aminotran 100.0 4.8E-44 1.6E-48 359.6 33.3 354 37-431 27-389 (390)
35 2x5f_A Aspartate_tyrosine_phen 100.0 4.6E-44 1.6E-48 364.6 33.4 352 38-431 47-429 (430)
36 1vp4_A Aminotransferase, putat 100.0 8.7E-44 3E-48 362.1 35.3 362 38-433 43-420 (425)
37 3rq1_A Aminotransferase class 100.0 1.3E-43 4.6E-48 359.8 36.0 378 11-433 13-417 (418)
38 4dq6_A Putative pyridoxal phos 100.0 1E-43 3.4E-48 356.9 33.9 352 37-428 31-390 (391)
39 1xi9_A Putative transaminase; 100.0 4.9E-44 1.7E-48 361.7 31.0 356 38-433 38-405 (406)
40 2zy4_A L-aspartate beta-decarb 100.0 1.2E-44 4E-49 378.5 26.8 356 40-433 106-524 (546)
41 3g0t_A Putative aminotransfera 100.0 4.1E-44 1.4E-48 365.5 29.5 354 38-430 44-436 (437)
42 2gb3_A Aspartate aminotransfer 100.0 1.7E-43 5.9E-48 358.1 33.3 351 38-433 43-404 (409)
43 3ly1_A Putative histidinol-pho 100.0 5.3E-43 1.8E-47 347.2 35.6 336 36-430 14-351 (354)
44 3ei9_A LL-diaminopimelate amin 100.0 4.9E-44 1.7E-48 364.6 28.8 350 37-429 55-426 (432)
45 2z61_A Probable aspartate amin 100.0 1.2E-43 4.2E-48 354.1 30.6 338 37-429 28-369 (370)
46 3l8a_A METC, putative aminotra 100.0 2.4E-43 8.1E-48 358.5 33.2 354 37-429 60-420 (421)
47 1fg7_A Histidinol phosphate am 100.0 3.5E-43 1.2E-47 349.3 32.2 321 38-427 29-354 (356)
48 3t18_A Aminotransferase class 100.0 7.5E-43 2.6E-47 353.7 34.8 377 8-433 9-412 (413)
49 3ffh_A Histidinol-phosphate am 100.0 9.6E-43 3.3E-47 346.7 34.6 330 38-428 32-363 (363)
50 1v2d_A Glutamine aminotransfer 100.0 2.6E-43 8.8E-48 353.2 30.4 342 38-433 25-373 (381)
51 7aat_A Aspartate aminotransfer 100.0 9.7E-44 3.3E-48 358.7 27.0 345 38-428 28-400 (401)
52 4f4e_A Aromatic-amino-acid ami 100.0 1.1E-43 3.8E-48 360.8 27.3 345 38-428 49-419 (420)
53 2zc0_A Alanine glyoxylate tran 100.0 2.6E-42 8.9E-47 348.9 36.1 360 39-432 35-405 (407)
54 3d6k_A Putative aminotransfera 100.0 2.3E-43 7.8E-48 358.7 27.9 354 39-433 33-420 (422)
55 3euc_A Histidinol-phosphate am 100.0 4.4E-42 1.5E-46 342.4 35.6 340 29-429 22-366 (367)
56 2zyj_A Alpha-aminodipate amino 100.0 1.8E-42 6.2E-47 349.0 33.1 350 38-432 32-394 (397)
57 3asa_A LL-diaminopimelate amin 100.0 3.1E-43 1.1E-47 355.1 26.7 352 37-433 32-395 (400)
58 1lc5_A COBD, L-threonine-O-3-p 100.0 5.9E-42 2E-46 341.3 33.9 336 37-432 23-361 (364)
59 3fsl_A Aromatic-amino-acid ami 100.0 1.3E-42 4.5E-47 349.8 27.1 346 37-428 25-397 (397)
60 3ppl_A Aspartate aminotransfer 100.0 3.5E-42 1.2E-46 350.4 30.4 358 37-432 32-421 (427)
61 3ftb_A Histidinol-phosphate am 100.0 1.6E-41 5.6E-46 337.2 33.7 334 36-430 24-360 (361)
62 3f6t_A Aspartate aminotransfer 100.0 1.1E-42 3.8E-47 363.3 26.3 357 39-433 104-527 (533)
63 3p1t_A Putative histidinol-pho 100.0 3.2E-41 1.1E-45 331.9 32.3 322 35-429 13-335 (337)
64 2hox_A ALLIIN lyase 1; cystein 100.0 2.2E-43 7.5E-48 359.1 16.9 357 10-431 20-425 (427)
65 4eu1_A Mitochondrial aspartate 100.0 8.2E-42 2.8E-46 345.7 28.4 344 38-428 41-408 (409)
66 4h51_A Aspartate aminotransfer 100.0 1.1E-41 3.7E-46 343.7 27.8 374 5-433 18-419 (420)
67 1ajs_A Aspartate aminotransfer 100.0 1E-41 3.6E-46 345.1 27.9 349 38-431 30-411 (412)
68 1yaa_A Aspartate aminotransfer 100.0 2.2E-41 7.4E-46 342.9 29.8 347 38-430 29-410 (412)
69 3ez1_A Aminotransferase MOCR f 100.0 1.2E-41 4.1E-46 346.0 27.0 354 38-433 25-417 (423)
70 3fkd_A L-threonine-O-3-phospha 100.0 4.1E-41 1.4E-45 333.3 30.0 326 38-433 15-344 (350)
71 3meb_A Aspartate aminotransfer 100.0 6.6E-41 2.3E-45 343.2 31.5 348 38-431 49-444 (448)
72 3g7q_A Valine-pyruvate aminotr 100.0 1.5E-41 5.1E-46 344.3 26.2 357 38-433 31-415 (417)
73 3op7_A Aminotransferase class 100.0 2.9E-41 9.9E-46 337.5 27.6 315 79-433 56-373 (375)
74 3b1d_A Betac-S lyase; HET: PLP 100.0 5.1E-45 1.8E-49 367.2 0.0 354 38-429 31-391 (392)
75 2q7w_A Aspartate aminotransfer 100.0 1.6E-41 5.5E-46 341.7 23.5 344 38-428 26-396 (396)
76 3if2_A Aminotransferase; YP_26 100.0 7.3E-41 2.5E-45 342.3 28.3 368 38-433 31-442 (444)
77 3hdo_A Histidinol-phosphate am 100.0 6.2E-40 2.1E-44 326.2 33.3 332 37-433 25-357 (360)
78 3cq5_A Histidinol-phosphate am 100.0 1.6E-39 5.4E-44 324.4 35.4 334 40-430 32-367 (369)
79 3bwn_A AT1G70560, L-tryptophan 100.0 3.5E-41 1.2E-45 339.2 22.7 344 25-430 9-386 (391)
80 2ay1_A Aroat, aromatic amino a 100.0 1E-40 3.5E-45 335.7 23.8 341 38-427 26-392 (394)
81 1uu1_A Histidinol-phosphate am 100.0 2.9E-39 9.9E-44 318.2 30.3 316 37-427 18-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 9.9E-36 3.4E-40 299.8 31.3 344 37-433 42-394 (398)
83 3tqx_A 2-amino-3-ketobutyrate 100.0 1.1E-33 3.8E-38 284.4 28.1 344 37-431 42-396 (399)
84 1eg5_A Aminotransferase; PLP-d 100.0 9.7E-34 3.3E-38 283.1 26.6 341 41-434 3-379 (384)
85 1fc4_A 2-amino-3-ketobutyrate 100.0 2.5E-33 8.7E-38 282.4 28.3 341 37-432 44-398 (401)
86 1vjo_A Alanine--glyoxylate ami 100.0 4.4E-33 1.5E-37 279.8 29.1 299 88-429 65-393 (393)
87 2dr1_A PH1308 protein, 386AA l 100.0 2.5E-32 8.7E-37 273.2 31.7 301 89-432 52-380 (386)
88 1t3i_A Probable cysteine desul 100.0 4.2E-33 1.4E-37 282.1 26.0 342 38-433 27-415 (420)
89 1bs0_A Protein (8-amino-7-oxon 100.0 6.8E-33 2.3E-37 277.6 26.9 336 37-427 38-383 (384)
90 2ch1_A 3-hydroxykynurenine tra 100.0 2.3E-32 8E-37 274.6 26.6 299 88-433 53-385 (396)
91 1kmj_A Selenocysteine lyase; p 100.0 2.6E-32 8.7E-37 274.9 25.9 340 39-431 23-405 (406)
92 1svv_A Threonine aldolase; str 100.0 6.2E-32 2.1E-36 267.5 28.2 337 37-430 12-357 (359)
93 1elu_A L-cysteine/L-cystine C- 100.0 2.9E-33 1E-37 280.4 18.3 334 39-427 16-388 (390)
94 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 5.7E-33 2E-37 276.5 19.5 340 38-431 7-370 (371)
95 2z9v_A Aspartate aminotransfer 100.0 9.8E-32 3.3E-36 269.7 28.0 332 41-433 10-373 (392)
96 2bwn_A 5-aminolevulinate synth 100.0 6.8E-32 2.3E-36 272.0 26.6 344 38-430 46-399 (401)
97 2huf_A Alanine glyoxylate amin 100.0 1.1E-31 3.6E-36 269.6 27.6 301 86-434 52-386 (393)
98 3zrp_A Serine-pyruvate aminotr 100.0 1.2E-31 4.3E-36 267.8 27.1 297 87-433 36-365 (384)
99 3lvm_A Cysteine desulfurase; s 100.0 4.4E-32 1.5E-36 275.2 23.9 347 35-436 18-404 (423)
100 1jg8_A L-ALLO-threonine aldola 100.0 6.7E-32 2.3E-36 266.5 24.6 331 37-430 2-345 (347)
101 2w8t_A SPT, serine palmitoyltr 100.0 1.9E-31 6.4E-36 271.3 27.9 342 37-434 63-418 (427)
102 4eb5_A Probable cysteine desul 100.0 3.3E-32 1.1E-36 271.9 21.9 298 87-433 44-375 (382)
103 1m32_A 2-aminoethylphosphonate 100.0 1.6E-31 5.6E-36 265.0 26.1 330 40-430 5-364 (366)
104 4hvk_A Probable cysteine desul 100.0 1.6E-31 5.5E-36 266.5 25.6 296 89-433 46-375 (382)
105 3f9t_A TDC, L-tyrosine decarbo 100.0 3.5E-31 1.2E-35 265.4 28.1 303 87-429 66-396 (397)
106 1e5e_A MGL, methionine gamma-l 100.0 4.1E-31 1.4E-35 266.8 28.7 288 80-433 54-397 (404)
107 1iug_A Putative aspartate amin 100.0 9.4E-32 3.2E-36 265.6 23.0 294 86-431 34-348 (352)
108 2ez2_A Beta-tyrosinase, tyrosi 100.0 2.3E-30 8E-35 265.4 33.2 345 40-433 44-433 (456)
109 3nnk_A Ureidoglycine-glyoxylat 100.0 1.1E-30 3.8E-35 263.6 30.0 298 88-433 48-392 (411)
110 3kki_A CAI-1 autoinducer synth 100.0 1.6E-30 5.3E-35 262.9 31.1 340 37-431 58-404 (409)
111 3kgw_A Alanine-glyoxylate amin 100.0 1E-30 3.5E-35 262.0 26.7 299 88-433 58-390 (393)
112 2dkj_A Serine hydroxymethyltra 100.0 6.3E-31 2.1E-35 265.2 25.1 340 38-430 23-387 (407)
113 1sff_A 4-aminobutyrate aminotr 100.0 2.3E-31 7.9E-36 270.2 21.7 350 37-432 40-425 (426)
114 1v72_A Aldolase; PLP-dependent 100.0 1.9E-30 6.7E-35 256.6 27.7 336 37-432 6-354 (356)
115 3cai_A Possible aminotransfera 100.0 8.4E-31 2.9E-35 264.3 25.3 332 39-426 26-404 (406)
116 3isl_A Purine catabolism prote 100.0 3.1E-30 1E-34 260.8 29.3 298 88-433 46-392 (416)
117 2yrr_A Aminotransferase, class 100.0 8.7E-31 3E-35 258.5 23.9 295 86-430 33-352 (353)
118 2eh6_A Acoat, acetylornithine 100.0 1.2E-30 4.2E-35 260.2 20.3 322 37-428 27-375 (375)
119 3i4j_A Aminotransferase, class 100.0 8.5E-30 2.9E-34 259.2 26.6 356 37-431 28-428 (430)
120 2aeu_A Hypothetical protein MJ 100.0 1.6E-29 5.6E-34 252.5 27.5 327 39-433 29-373 (374)
121 2eo5_A 419AA long hypothetical 100.0 3.5E-29 1.2E-33 253.9 28.4 336 37-431 41-418 (419)
122 2bkw_A Alanine-glyoxylate amin 100.0 1.2E-29 4E-34 253.7 23.9 296 88-430 40-383 (385)
123 3f0h_A Aminotransferase; RER07 100.0 4.5E-29 1.5E-33 248.9 26.2 298 89-430 51-373 (376)
124 2ord_A Acoat, acetylornithine 100.0 7.3E-30 2.5E-34 256.9 20.4 325 37-430 39-396 (397)
125 3ruy_A Ornithine aminotransfer 100.0 1.5E-29 5.2E-34 254.0 21.6 323 37-428 35-391 (392)
126 3a9z_A Selenocysteine lyase; P 100.0 2.6E-29 8.9E-34 255.6 22.7 334 38-433 17-430 (432)
127 3vax_A Putative uncharacterize 100.0 2.4E-30 8.4E-35 260.2 14.7 337 36-430 17-399 (400)
128 4adb_A Succinylornithine trans 100.0 8.9E-29 3E-33 249.4 25.1 332 37-433 38-402 (406)
129 1vef_A Acetylornithine/acetyl- 100.0 1.6E-29 5.5E-34 254.1 18.3 326 37-428 44-394 (395)
130 3pj0_A LMO0305 protein; struct 100.0 2.2E-29 7.6E-34 249.6 18.4 328 39-427 14-358 (359)
131 3lws_A Aromatic amino acid bet 100.0 6.6E-29 2.3E-33 246.1 21.6 324 43-428 15-356 (357)
132 3n5m_A Adenosylmethionine-8-am 100.0 2.9E-28 1E-32 249.6 26.9 351 36-430 47-451 (452)
133 2rfv_A Methionine gamma-lyase; 100.0 5.3E-28 1.8E-32 243.5 28.2 281 86-426 64-395 (398)
134 2oga_A Transaminase; PLP-depen 100.0 1.2E-28 4E-33 248.4 22.9 327 38-433 30-398 (399)
135 3dxv_A Alpha-amino-epsilon-cap 100.0 1.7E-28 5.7E-33 250.4 24.2 350 36-433 41-427 (439)
136 3nx3_A Acoat, acetylornithine 100.0 2.7E-28 9.3E-33 245.2 25.1 332 37-430 35-394 (395)
137 3n0l_A Serine hydroxymethyltra 100.0 1.4E-27 4.8E-32 241.4 29.2 347 39-432 26-390 (417)
138 3ffr_A Phosphoserine aminotran 100.0 1.7E-28 5.8E-33 243.0 22.0 288 89-428 42-361 (362)
139 2pb2_A Acetylornithine/succiny 100.0 5.9E-28 2E-32 245.0 25.6 330 37-431 56-418 (420)
140 1s0a_A Adenosylmethionine-8-am 100.0 1.4E-27 4.9E-32 242.7 28.5 339 38-432 43-425 (429)
141 1ax4_A Tryptophanase; tryptoph 100.0 1E-27 3.4E-32 246.5 27.3 325 81-433 71-443 (467)
142 1b9h_A AHBA synthase, protein 100.0 2.4E-28 8.1E-33 245.0 21.8 298 81-430 33-387 (388)
143 1zod_A DGD, 2,2-dialkylglycine 100.0 6.1E-28 2.1E-32 245.7 25.1 349 38-431 43-432 (433)
144 3ecd_A Serine hydroxymethyltra 100.0 2.3E-27 8E-32 240.3 29.3 346 39-432 33-398 (425)
145 3gju_A Putative aminotransfera 100.0 3.5E-27 1.2E-31 242.1 30.5 356 36-433 49-458 (460)
146 4ffc_A 4-aminobutyrate aminotr 100.0 7.1E-28 2.4E-32 246.7 25.2 359 37-433 63-451 (453)
147 2po3_A 4-dehydrase; external a 100.0 4.8E-28 1.6E-32 245.9 23.1 327 42-433 20-388 (424)
148 1mdo_A ARNB aminotransferase; 100.0 1.3E-27 4.3E-32 239.9 25.8 300 82-433 35-388 (393)
149 3mad_A Sphingosine-1-phosphate 100.0 1.2E-27 4.2E-32 248.9 25.8 308 82-433 131-471 (514)
150 1wyu_B Glycine dehydrogenase s 100.0 8.8E-28 3E-32 247.4 23.4 302 85-430 102-440 (474)
151 1qz9_A Kynureninase; kynurenin 100.0 6.5E-28 2.2E-32 243.9 21.9 325 38-431 27-402 (416)
152 1ibj_A CBL, cystathionine beta 100.0 6.3E-27 2.2E-31 239.6 28.3 295 80-430 125-461 (464)
153 3gbx_A Serine hydroxymethyltra 100.0 3.6E-27 1.2E-31 238.5 26.1 346 39-433 31-398 (420)
154 4a6r_A Omega transaminase; tra 100.0 1.3E-26 4.5E-31 237.8 29.1 353 37-434 49-452 (459)
155 3l44_A Glutamate-1-semialdehyd 100.0 1.9E-27 6.5E-32 242.2 22.5 347 37-433 54-432 (434)
156 1w23_A Phosphoserine aminotran 100.0 3.3E-28 1.1E-32 241.1 16.4 283 89-430 51-359 (360)
157 3mc6_A Sphingosine-1-phosphate 100.0 2.4E-27 8.2E-32 245.7 22.4 312 81-433 98-439 (497)
158 1rv3_A Serine hydroxymethyltra 100.0 6.3E-27 2.1E-31 241.5 25.3 344 39-430 45-430 (483)
159 3oks_A 4-aminobutyrate transam 100.0 1.2E-26 4.3E-31 237.4 26.9 354 37-430 60-450 (451)
160 2c0r_A PSAT, phosphoserine ami 100.0 1.8E-27 6.2E-32 236.3 19.7 287 88-431 47-361 (362)
161 1cs1_A CGS, protein (cystathio 100.0 5E-26 1.7E-30 228.1 29.6 287 81-432 48-384 (386)
162 3dod_A Adenosylmethionine-8-am 100.0 6.6E-27 2.3E-31 239.2 23.6 350 37-433 43-445 (448)
163 2vi8_A Serine hydroxymethyltra 100.0 2.8E-26 9.7E-31 230.9 27.9 299 88-432 67-388 (405)
164 3h7f_A Serine hydroxymethyltra 100.0 1.5E-26 5.2E-31 236.5 25.8 341 39-433 46-416 (447)
165 3a8u_X Omega-amino acid--pyruv 100.0 2.6E-26 8.8E-31 234.9 27.0 344 38-431 50-447 (449)
166 1z7d_A Ornithine aminotransfer 99.9 1.9E-26 6.5E-31 234.8 25.7 331 37-433 64-431 (433)
167 3k28_A Glutamate-1-semialdehyd 99.9 9.7E-27 3.3E-31 236.7 22.9 341 36-432 51-428 (429)
168 2oat_A Ornithine aminotransfer 99.9 2.7E-26 9.1E-31 234.1 25.7 328 38-430 76-438 (439)
169 1pff_A Methionine gamma-lyase; 99.9 1.4E-26 4.7E-31 227.1 22.2 277 90-427 2-330 (331)
170 3uwc_A Nucleotide-sugar aminot 99.9 1.2E-26 3.9E-31 231.3 21.5 322 39-431 7-371 (374)
171 3tfu_A Adenosylmethionine-8-am 99.9 2.3E-26 7.7E-31 235.7 24.1 339 39-432 76-454 (457)
172 3cog_A Cystathionine gamma-lya 99.9 2.5E-26 8.6E-31 231.6 23.7 286 80-431 62-398 (403)
173 3ndn_A O-succinylhomoserine su 99.9 2.6E-26 8.8E-31 232.0 23.5 285 88-428 83-413 (414)
174 3dr4_A Putative perosamine syn 99.9 1.1E-26 3.8E-31 233.1 20.6 324 36-428 20-390 (391)
175 3fq8_A Glutamate-1-semialdehyd 99.9 1.4E-26 4.8E-31 235.2 21.1 338 37-430 51-426 (427)
176 2oqx_A Tryptophanase; lyase, p 99.9 1.7E-26 5.8E-31 237.3 21.5 320 81-432 69-443 (467)
177 3qhx_A Cystathionine gamma-syn 99.9 1.4E-25 4.7E-30 225.4 27.3 282 87-428 67-391 (392)
178 2c81_A Glutamine-2-deoxy-scyll 99.9 9.4E-26 3.2E-30 228.5 25.8 302 81-433 33-416 (418)
179 1gc0_A Methionine gamma-lyase; 99.9 2.5E-25 8.6E-30 224.0 28.8 282 86-427 65-397 (398)
180 3e9k_A Kynureninase; kynurenin 99.9 3.7E-26 1.3E-30 234.7 22.7 296 88-433 113-463 (465)
181 3hmu_A Aminotransferase, class 99.9 8.3E-26 2.9E-30 232.3 24.7 360 36-443 53-464 (472)
182 3i5t_A Aminotransferase; pyrid 99.9 1.4E-25 4.8E-30 230.9 26.2 351 37-435 53-458 (476)
183 2dgk_A GAD-beta, GADB, glutama 99.9 1.5E-25 5.2E-30 229.4 26.1 317 81-433 72-436 (452)
184 2fnu_A Aminotransferase; prote 99.9 3.9E-25 1.3E-29 220.2 27.7 291 84-431 30-372 (375)
185 2fyf_A PSAT, phosphoserine ami 99.9 6.9E-26 2.4E-30 228.0 22.4 323 38-430 39-397 (398)
186 3acz_A Methionine gamma-lyase; 99.9 5.2E-25 1.8E-29 221.0 27.9 279 87-429 60-387 (389)
187 1qgn_A Protein (cystathionine 99.9 9.9E-25 3.4E-29 221.8 30.0 283 87-430 115-444 (445)
188 2cb1_A O-acetyl homoserine sul 99.9 3.4E-24 1.2E-28 216.7 31.2 284 81-426 49-411 (412)
189 1n8p_A Cystathionine gamma-lya 99.9 5.5E-25 1.9E-29 221.1 25.2 282 87-427 56-391 (393)
190 2cy8_A D-phgat, D-phenylglycin 99.9 6.1E-25 2.1E-29 225.0 25.9 332 37-433 56-437 (453)
191 2epj_A Glutamate-1-semialdehyd 99.9 5.3E-25 1.8E-29 224.1 24.5 333 37-431 55-431 (434)
192 2e7u_A Glutamate-1-semialdehyd 99.9 9E-25 3.1E-29 221.7 24.6 329 37-428 51-424 (424)
193 4e77_A Glutamate-1-semialdehyd 99.9 1.2E-24 4E-29 221.3 24.7 338 36-430 51-428 (429)
194 3hbx_A GAD 1, glutamate decarb 99.9 1.3E-24 4.4E-29 225.2 24.4 317 82-433 87-446 (502)
195 3nyt_A Aminotransferase WBPE; 99.9 8E-25 2.7E-29 217.8 21.9 289 81-427 30-360 (367)
196 1o69_A Aminotransferase; struc 99.9 1.4E-23 4.7E-28 210.9 30.7 303 81-430 25-386 (394)
197 3frk_A QDTB; aminotransferase, 99.9 2.7E-25 9.1E-30 221.6 17.8 296 81-432 31-369 (373)
198 3ri6_A O-acetylhomoserine sulf 99.9 1.3E-24 4.4E-29 220.3 22.6 281 87-428 83-429 (430)
199 1js3_A DDC;, DOPA decarboxylas 99.9 5.6E-24 1.9E-28 219.8 26.9 322 81-433 104-476 (486)
200 3ke3_A Putative serine-pyruvat 99.9 1.2E-23 4.2E-28 210.2 26.9 301 89-432 34-377 (379)
201 2okj_A Glutamate decarboxylase 99.9 1.3E-23 4.4E-28 218.0 27.9 323 82-430 124-501 (504)
202 3vp6_A Glutamate decarboxylase 99.9 1.5E-23 5.3E-28 217.5 28.1 326 80-431 125-505 (511)
203 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.2E-25 7.5E-30 227.6 13.6 291 82-433 53-355 (446)
204 2cjg_A L-lysine-epsilon aminot 99.9 3.8E-24 1.3E-28 218.8 22.1 293 89-430 104-447 (449)
205 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.2E-24 2.1E-28 217.6 23.3 302 88-428 131-455 (456)
206 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.9E-23 6.4E-28 212.9 26.7 294 82-429 58-434 (437)
207 2qma_A Diaminobutyrate-pyruvat 99.9 2.8E-23 9.6E-28 215.1 25.0 316 82-430 132-495 (497)
208 3nmy_A Xometc, cystathionine g 99.9 5.5E-23 1.9E-27 206.7 25.7 282 87-429 68-397 (400)
209 3ju7_A Putative PLP-dependent 99.9 1E-22 3.5E-27 203.3 25.9 293 87-431 37-375 (377)
210 2a7v_A Serine hydroxymethyltra 99.9 2E-22 7E-27 206.4 27.4 346 39-431 55-441 (490)
211 2fq6_A Cystathionine beta-lyas 99.9 6.1E-23 2.1E-27 207.2 21.6 283 87-425 83-412 (415)
212 2jis_A Cysteine sulfinic acid 99.9 5.4E-22 1.9E-26 206.3 29.2 321 82-430 140-514 (515)
213 4e1o_A HDC, histidine decarbox 99.9 5.7E-22 2E-26 204.3 28.0 323 80-432 108-479 (481)
214 3k40_A Aromatic-L-amino-acid d 99.9 6.9E-22 2.4E-26 203.3 26.7 322 81-433 104-473 (475)
215 2ctz_A O-acetyl-L-homoserine s 99.9 1.1E-21 3.8E-26 198.7 26.1 281 88-428 60-420 (421)
216 3i16_A Aluminum resistance pro 99.9 5.4E-22 1.9E-26 200.1 23.4 255 81-385 69-354 (427)
217 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.4E-21 8.1E-26 194.2 27.7 320 39-424 2-389 (390)
218 3jzl_A Putative cystathionine 99.9 6E-22 2.1E-26 199.1 21.5 254 80-385 54-337 (409)
219 1wyu_A Glycine dehydrogenase ( 99.9 1.3E-21 4.6E-26 199.2 23.0 289 87-428 105-437 (438)
220 3hvy_A Cystathionine beta-lyas 99.9 1.4E-21 4.6E-26 197.2 22.2 254 80-385 69-354 (427)
221 1ohv_A 4-aminobutyrate aminotr 99.9 2.7E-21 9.1E-26 198.8 21.8 345 37-431 62-471 (472)
222 1c4k_A Protein (ornithine deca 99.9 2.3E-21 7.7E-26 207.3 21.1 312 86-432 173-567 (730)
223 2yky_A Beta-transaminase; tran 99.8 8.1E-24 2.8E-28 215.6 0.0 333 37-432 99-461 (465)
224 3ht4_A Aluminum resistance pro 99.9 1.1E-20 3.9E-25 191.3 22.4 233 115-386 88-344 (431)
225 2vyc_A Biodegradative arginine 99.9 7.6E-20 2.6E-24 197.1 25.8 308 87-432 206-606 (755)
226 3n75_A LDC, lysine decarboxyla 99.8 2.6E-18 8.9E-23 182.2 20.8 312 84-432 193-561 (715)
227 3e77_A Phosphoserine aminotran 99.7 2E-17 6.9E-22 163.8 17.5 289 88-431 60-375 (377)
228 3qm2_A Phosphoserine aminotran 99.7 5.1E-17 1.8E-21 161.7 20.0 288 86-431 72-385 (386)
229 3m5u_A Phosphoserine aminotran 99.7 1.5E-16 5.1E-21 156.9 22.3 330 37-431 3-360 (361)
230 4ao9_A Beta-phenylalanine amin 99.7 1E-15 3.4E-20 155.0 22.6 336 35-433 84-448 (454)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 2.4E-14 8.3E-19 141.7 28.9 302 111-436 134-466 (501)
232 4atq_A 4-aminobutyrate transam 99.6 4.6E-14 1.6E-18 143.3 25.1 356 34-430 60-454 (456)
233 3ou5_A Serine hydroxymethyltra 99.6 3.8E-13 1.3E-17 132.7 27.9 306 82-429 92-439 (490)
234 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 1.2E-12 4.3E-17 131.1 29.4 321 88-434 96-446 (450)
235 4e3q_A Pyruvate transaminase; 99.6 1.7E-12 5.8E-17 132.3 27.7 348 37-433 66-470 (473)
236 4a0g_A Adenosylmethionine-8-am 99.5 1.3E-13 4.5E-18 149.7 17.2 216 191-431 594-828 (831)
237 4fgs_A Probable dehydrogenase 84.9 5.5 0.00019 36.7 10.2 103 111-220 29-134 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 81.6 8.5 0.00029 34.5 10.0 104 110-219 5-110 (247)
239 3gem_A Short chain dehydrogena 79.4 12 0.0004 33.9 10.3 100 110-218 26-127 (260)
240 4dqx_A Probable oxidoreductase 79.1 13 0.00045 34.0 10.6 103 110-219 26-131 (277)
241 3tpc_A Short chain alcohol deh 79.0 12 0.00042 33.5 10.3 103 110-219 6-115 (257)
242 4g81_D Putative hexonate dehyd 78.4 17 0.00057 33.0 10.8 105 109-220 7-117 (255)
243 4e6p_A Probable sorbitol dehyd 77.0 16 0.00056 32.7 10.5 103 110-218 7-111 (259)
244 3ged_A Short-chain dehydrogena 76.8 13 0.00044 33.6 9.5 100 113-220 4-106 (247)
245 4eso_A Putative oxidoreductase 75.8 17 0.00059 32.6 10.3 103 110-219 7-112 (255)
246 3sc4_A Short chain dehydrogena 75.8 36 0.0012 31.0 12.6 105 109-219 7-123 (285)
247 2o23_A HADH2 protein; HSD17B10 75.7 32 0.0011 30.7 12.1 103 110-218 11-121 (265)
248 3gvc_A Oxidoreductase, probabl 75.1 12 0.00042 34.2 9.1 103 111-219 29-133 (277)
249 3tzq_B Short-chain type dehydr 74.9 25 0.00084 31.8 11.2 103 110-219 10-117 (271)
250 3n74_A 3-ketoacyl-(acyl-carrie 74.7 20 0.00069 32.1 10.4 105 109-219 7-114 (261)
251 3l6e_A Oxidoreductase, short-c 74.3 14 0.00049 32.7 9.2 101 113-219 5-107 (235)
252 3ppi_A 3-hydroxyacyl-COA dehyd 74.1 20 0.00069 32.5 10.4 103 110-219 29-139 (281)
253 3grp_A 3-oxoacyl-(acyl carrier 73.6 16 0.00053 33.2 9.4 102 110-218 26-130 (266)
254 3pxx_A Carveol dehydrogenase; 72.6 15 0.0005 33.6 9.0 104 110-219 9-127 (287)
255 1uls_A Putative 3-oxoacyl-acyl 72.5 25 0.00084 31.3 10.4 100 111-219 5-107 (245)
256 2ew8_A (S)-1-phenylethanol deh 72.3 33 0.0011 30.5 11.2 103 111-219 7-112 (249)
257 3m1a_A Putative dehydrogenase; 72.2 19 0.00063 32.8 9.7 101 112-218 6-108 (281)
258 3e03_A Short chain dehydrogena 71.7 54 0.0018 29.6 12.7 103 109-218 4-119 (274)
259 3rih_A Short chain dehydrogena 71.0 41 0.0014 30.9 11.8 104 110-219 40-149 (293)
260 3op4_A 3-oxoacyl-[acyl-carrier 70.8 21 0.00071 31.8 9.5 103 110-219 8-113 (248)
261 4gkb_A 3-oxoacyl-[acyl-carrier 69.9 50 0.0017 29.8 11.8 104 109-219 5-112 (258)
262 3h7a_A Short chain dehydrogena 69.2 62 0.0021 28.7 12.8 102 110-219 6-113 (252)
263 3kvo_A Hydroxysteroid dehydrog 68.4 65 0.0022 30.4 12.8 101 111-218 45-158 (346)
264 3t7c_A Carveol dehydrogenase; 67.4 39 0.0013 31.0 10.8 103 110-219 27-148 (299)
265 4fn4_A Short chain dehydrogena 67.2 37 0.0013 30.6 10.3 104 110-220 6-116 (254)
266 1hxh_A 3BETA/17BETA-hydroxyste 66.8 36 0.0012 30.3 10.2 102 111-219 6-110 (253)
267 4fc7_A Peroxisomal 2,4-dienoyl 65.8 46 0.0016 30.1 10.9 102 111-219 27-135 (277)
268 3dii_A Short-chain dehydrogena 65.7 30 0.001 30.7 9.4 99 113-219 4-105 (247)
269 3uve_A Carveol dehydrogenase ( 65.2 27 0.00091 31.8 9.1 103 110-219 10-135 (286)
270 1hdc_A 3-alpha, 20 beta-hydrox 65.2 37 0.0013 30.2 10.0 101 111-218 5-108 (254)
271 4dmm_A 3-oxoacyl-[acyl-carrier 65.1 25 0.00087 31.8 8.9 104 109-219 26-136 (269)
272 4dyv_A Short-chain dehydrogena 64.6 34 0.0012 31.0 9.7 100 113-219 30-133 (272)
273 3ksu_A 3-oxoacyl-acyl carrier 64.2 79 0.0027 28.2 13.6 104 109-219 9-121 (262)
274 3sx2_A Putative 3-ketoacyl-(ac 64.0 47 0.0016 29.9 10.6 100 110-218 12-127 (278)
275 3tsc_A Putative oxidoreductase 63.9 30 0.001 31.3 9.2 103 110-219 10-131 (277)
276 3lyl_A 3-oxoacyl-(acyl-carrier 63.5 58 0.002 28.6 10.9 104 110-219 4-112 (247)
277 3is3_A 17BETA-hydroxysteroid d 62.7 27 0.00091 31.5 8.5 102 111-219 18-126 (270)
278 3r1i_A Short-chain type dehydr 62.1 63 0.0022 29.2 11.0 104 109-219 30-139 (276)
279 3v2g_A 3-oxoacyl-[acyl-carrier 61.8 36 0.0012 30.7 9.3 104 109-219 29-139 (271)
280 3s55_A Putative short-chain de 61.7 58 0.002 29.3 10.8 103 110-219 9-129 (281)
281 3ijr_A Oxidoreductase, short c 61.7 65 0.0022 29.4 11.1 103 110-219 46-156 (291)
282 3lf2_A Short chain oxidoreduct 61.5 60 0.002 29.0 10.7 106 109-220 6-118 (265)
283 4ibo_A Gluconate dehydrogenase 61.4 57 0.0019 29.4 10.6 105 109-219 24-133 (271)
284 3qlj_A Short chain dehydrogena 60.5 39 0.0013 31.4 9.5 102 111-219 27-144 (322)
285 4iin_A 3-ketoacyl-acyl carrier 60.1 36 0.0012 30.6 8.9 104 109-218 27-136 (271)
286 3zv4_A CIS-2,3-dihydrobiphenyl 59.5 39 0.0013 30.6 9.1 84 110-200 4-87 (281)
287 3pgx_A Carveol dehydrogenase; 59.4 39 0.0013 30.6 9.1 103 110-219 14-135 (280)
288 3l77_A Short-chain alcohol deh 59.4 38 0.0013 29.6 8.8 100 113-219 4-110 (235)
289 3ezl_A Acetoacetyl-COA reducta 59.4 48 0.0016 29.4 9.6 101 111-218 13-120 (256)
290 3v2h_A D-beta-hydroxybutyrate 59.1 77 0.0026 28.6 11.1 104 110-219 24-134 (281)
291 2a4k_A 3-oxoacyl-[acyl carrier 59.1 44 0.0015 30.0 9.3 102 111-218 6-109 (263)
292 4egf_A L-xylulose reductase; s 59.0 49 0.0017 29.7 9.6 104 110-219 19-128 (266)
293 1nff_A Putative oxidoreductase 58.6 60 0.002 28.9 10.1 102 111-218 7-110 (260)
294 3nyw_A Putative oxidoreductase 58.4 54 0.0018 29.1 9.7 102 111-218 7-115 (250)
295 3gaf_A 7-alpha-hydroxysteroid 58.2 59 0.002 28.9 10.0 103 109-218 10-117 (256)
296 3rkr_A Short chain oxidoreduct 58.1 79 0.0027 28.1 10.9 102 111-218 29-136 (262)
297 1vl8_A Gluconate 5-dehydrogena 57.8 74 0.0025 28.5 10.7 104 110-219 20-129 (267)
298 3oec_A Carveol dehydrogenase ( 57.8 41 0.0014 31.3 9.1 102 111-219 46-165 (317)
299 3pk0_A Short-chain dehydrogena 57.5 62 0.0021 28.9 10.0 103 110-219 9-118 (262)
300 3ak4_A NADH-dependent quinucli 57.3 60 0.002 28.9 9.9 102 110-218 11-115 (263)
301 2pnf_A 3-oxoacyl-[acyl-carrier 57.0 87 0.003 27.2 10.9 103 110-218 6-114 (248)
302 3gdg_A Probable NADP-dependent 57.0 83 0.0028 27.9 10.9 103 110-218 19-130 (267)
303 3osu_A 3-oxoacyl-[acyl-carrier 56.9 88 0.003 27.4 10.9 101 112-219 5-112 (246)
304 3edm_A Short chain dehydrogena 56.9 55 0.0019 29.2 9.5 102 110-218 7-116 (259)
305 3tjr_A Short chain dehydrogena 56.6 64 0.0022 29.6 10.2 102 110-218 30-137 (301)
306 3o38_A Short chain dehydrogena 56.1 52 0.0018 29.3 9.3 105 110-219 21-131 (266)
307 3tfo_A Putative 3-oxoacyl-(acy 56.1 87 0.003 28.1 10.8 100 113-219 6-111 (264)
308 3imf_A Short chain dehydrogena 55.4 80 0.0027 28.0 10.4 103 111-220 6-114 (257)
309 2wsb_A Galactitol dehydrogenas 55.0 81 0.0028 27.6 10.3 102 110-218 10-114 (254)
310 3sju_A Keto reductase; short-c 54.9 71 0.0024 28.8 10.1 101 112-219 25-131 (279)
311 3u9l_A 3-oxoacyl-[acyl-carrier 54.7 74 0.0025 29.6 10.3 100 112-218 6-116 (324)
312 3ucx_A Short chain dehydrogena 54.6 76 0.0026 28.3 10.1 103 110-219 10-119 (264)
313 2jah_A Clavulanic acid dehydro 54.5 84 0.0029 27.7 10.3 102 111-218 7-113 (247)
314 3ai3_A NADPH-sorbose reductase 54.4 92 0.0032 27.6 10.7 103 110-218 6-114 (263)
315 3ek2_A Enoyl-(acyl-carrier-pro 54.1 61 0.0021 28.8 9.5 102 109-218 12-126 (271)
316 3gh5_A HEX1, beta-hexosaminida 53.4 38 0.0013 34.2 8.3 26 204-229 249-274 (525)
317 2q2v_A Beta-D-hydroxybutyrate 53.3 1E+02 0.0036 27.1 10.8 100 112-218 5-108 (255)
318 2ehd_A Oxidoreductase, oxidore 52.6 80 0.0027 27.3 9.8 99 113-218 7-107 (234)
319 3r3s_A Oxidoreductase; structu 52.5 79 0.0027 28.8 10.0 103 110-219 48-159 (294)
320 3nrc_A Enoyl-[acyl-carrier-pro 52.3 1E+02 0.0035 27.7 10.7 102 111-218 26-137 (280)
321 1jak_A Beta-N-acetylhexosamini 52.1 35 0.0012 34.3 7.9 25 205-229 225-249 (512)
322 3oid_A Enoyl-[acyl-carrier-pro 52.0 89 0.0031 27.7 10.1 100 113-219 6-112 (258)
323 3rd5_A Mypaa.01249.C; ssgcid, 51.8 33 0.0011 31.2 7.3 80 110-200 15-94 (291)
324 3u5t_A 3-oxoacyl-[acyl-carrier 51.7 1.1E+02 0.0036 27.5 10.6 102 111-219 27-135 (267)
325 3v8b_A Putative dehydrogenase, 51.5 1E+02 0.0035 27.9 10.6 103 110-219 27-136 (283)
326 1zk4_A R-specific alcohol dehy 51.4 97 0.0033 27.0 10.3 103 111-218 6-111 (251)
327 2d1y_A Hypothetical protein TT 51.2 1.3E+02 0.0044 26.5 11.3 98 111-218 6-106 (256)
328 3a28_C L-2.3-butanediol dehydr 51.2 80 0.0027 28.0 9.6 99 113-218 4-110 (258)
329 3qiv_A Short-chain dehydrogena 51.2 1.1E+02 0.0039 26.7 10.7 104 109-219 7-119 (253)
330 3ftp_A 3-oxoacyl-[acyl-carrier 51.1 82 0.0028 28.3 9.8 102 111-219 28-135 (270)
331 1yde_A Retinal dehydrogenase/r 50.7 90 0.0031 27.9 10.0 100 111-218 9-112 (270)
332 3rjz_A N-type ATP pyrophosphat 50.5 70 0.0024 28.5 8.8 100 113-228 7-120 (237)
333 2b4q_A Rhamnolipids biosynthes 50.4 1.1E+02 0.0038 27.5 10.6 102 110-218 28-134 (276)
334 1x1t_A D(-)-3-hydroxybutyrate 50.3 99 0.0034 27.3 10.2 101 112-218 5-112 (260)
335 3i1j_A Oxidoreductase, short c 49.8 1.2E+02 0.0041 26.4 10.5 104 111-219 14-125 (247)
336 2c07_A 3-oxoacyl-(acyl-carrier 49.7 1.4E+02 0.0049 26.7 12.0 101 112-218 45-150 (285)
337 1geg_A Acetoin reductase; SDR 49.7 1E+02 0.0034 27.2 10.1 99 113-218 4-108 (256)
338 4imr_A 3-oxoacyl-(acyl-carrier 49.6 1.4E+02 0.005 26.6 11.3 102 109-218 31-138 (275)
339 3ioy_A Short-chain dehydrogena 48.7 88 0.003 28.9 9.8 102 111-219 8-117 (319)
340 2uvd_A 3-oxoacyl-(acyl-carrier 48.6 71 0.0024 28.1 8.8 100 112-218 5-111 (246)
341 2rhc_B Actinorhodin polyketide 48.5 1.2E+02 0.0041 27.2 10.5 101 111-218 22-128 (277)
342 3tl3_A Short-chain type dehydr 48.2 44 0.0015 29.7 7.4 98 111-219 9-113 (257)
343 1iy8_A Levodione reductase; ox 47.8 1.1E+02 0.0038 27.1 10.1 102 111-218 13-122 (267)
344 3svt_A Short-chain type dehydr 47.7 1.2E+02 0.004 27.3 10.3 103 110-219 10-122 (281)
345 1w6u_A 2,4-dienoyl-COA reducta 47.5 1.3E+02 0.0043 27.2 10.6 103 111-218 26-133 (302)
346 1y80_A Predicted cobalamin bin 47.1 1.3E+02 0.0044 25.8 10.0 56 152-224 112-167 (210)
347 2dtx_A Glucose 1-dehydrogenase 46.8 1.4E+02 0.0047 26.5 10.6 94 111-218 8-103 (264)
348 3p19_A BFPVVD8, putative blue 46.6 81 0.0028 28.2 8.9 99 111-219 16-117 (266)
349 2x9g_A PTR1, pteridine reducta 46.4 82 0.0028 28.5 9.0 86 112-200 24-114 (288)
350 4fhz_A Phospholipase/carboxyle 45.9 1.7E+02 0.0059 26.5 12.8 109 109-223 154-265 (285)
351 2z1n_A Dehydrogenase; reductas 45.9 1.6E+02 0.0053 26.0 10.8 102 111-218 7-114 (260)
352 1ae1_A Tropinone reductase-I; 45.3 1.7E+02 0.0057 26.1 11.0 102 110-218 20-128 (273)
353 1xkq_A Short-chain reductase f 45.2 95 0.0033 27.9 9.3 101 111-218 6-119 (280)
354 3awd_A GOX2181, putative polyo 44.7 1.5E+02 0.0051 25.9 10.4 103 110-218 12-120 (260)
355 3e2i_A Thymidine kinase; Zn-bi 44.6 41 0.0014 29.6 6.1 119 120-269 42-163 (219)
356 3ruf_A WBGU; rossmann fold, UD 44.6 86 0.0029 29.1 9.1 75 110-198 24-107 (351)
357 1yb1_A 17-beta-hydroxysteroid 44.5 1.2E+02 0.0042 26.9 9.9 83 110-198 30-115 (272)
358 2cfc_A 2-(R)-hydroxypropyl-COM 44.4 1.1E+02 0.0037 26.7 9.3 100 113-218 4-112 (250)
359 1yxm_A Pecra, peroxisomal tran 44.4 1.5E+02 0.0051 26.8 10.6 103 111-218 18-129 (303)
360 2ae2_A Protein (tropinone redu 44.3 1.7E+02 0.0057 25.8 11.1 102 110-218 8-116 (260)
361 2fwm_X 2,3-dihydro-2,3-dihydro 44.2 1.6E+02 0.0056 25.7 11.6 96 110-219 6-104 (250)
362 1zem_A Xylitol dehydrogenase; 43.7 1.5E+02 0.0051 26.2 10.3 101 111-218 7-114 (262)
363 2bgk_A Rhizome secoisolaricire 43.6 1.6E+02 0.0056 26.0 10.6 101 111-218 16-123 (278)
364 3cpr_A Dihydrodipicolinate syn 43.5 91 0.0031 28.8 8.8 57 170-229 31-90 (304)
365 3un1_A Probable oxidoreductase 43.5 1.1E+02 0.0038 27.2 9.3 98 110-219 27-126 (260)
366 1xg5_A ARPG836; short chain de 43.5 1.7E+02 0.0058 26.0 10.7 102 111-218 32-140 (279)
367 3cxt_A Dehydrogenase with diff 43.5 1.6E+02 0.0056 26.6 10.7 102 110-218 33-140 (291)
368 3vtz_A Glucose 1-dehydrogenase 43.4 1.7E+02 0.0058 26.1 10.6 95 110-218 13-110 (269)
369 4dry_A 3-oxoacyl-[acyl-carrier 43.3 80 0.0027 28.5 8.4 103 111-219 33-142 (281)
370 2pd6_A Estradiol 17-beta-dehyd 43.1 1.4E+02 0.0046 26.3 9.9 102 111-218 7-121 (264)
371 1g0o_A Trihydroxynaphthalene r 42.8 1.8E+02 0.006 26.0 10.7 101 111-218 29-136 (283)
372 4b79_A PA4098, probable short- 42.7 93 0.0032 27.7 8.4 95 112-220 12-107 (242)
373 3gk3_A Acetoacetyl-COA reducta 42.5 1.7E+02 0.0058 25.9 10.5 100 113-218 27-132 (269)
374 4iiu_A 3-oxoacyl-[acyl-carrier 42.5 1.8E+02 0.006 25.7 10.6 101 111-218 26-133 (267)
375 4e3z_A Putative oxidoreductase 42.4 96 0.0033 27.7 8.8 100 113-219 28-135 (272)
376 3l21_A DHDPS, dihydrodipicolin 42.4 82 0.0028 29.1 8.3 57 170-229 30-89 (304)
377 1xhl_A Short-chain dehydrogena 42.0 94 0.0032 28.3 8.7 101 111-218 26-137 (297)
378 3tox_A Short chain dehydrogena 41.9 1.7E+02 0.0057 26.3 10.4 102 111-219 8-116 (280)
379 3s8m_A Enoyl-ACP reductase; ro 41.6 2.2E+02 0.0075 27.7 11.4 82 111-199 61-159 (422)
380 1h5q_A NADP-dependent mannitol 41.5 1.8E+02 0.0061 25.4 11.6 101 112-218 15-121 (265)
381 1c7s_A Beta-N-acetylhexosamini 41.5 40 0.0014 36.2 6.6 27 203-229 392-418 (858)
382 2pzm_A Putative nucleotide sug 41.0 2.1E+02 0.0072 26.1 11.2 99 111-224 20-127 (330)
383 1ofu_X SULA, hypothetical prot 40.8 1.3E+02 0.0044 23.5 8.6 79 134-227 32-113 (119)
384 1fmc_A 7 alpha-hydroxysteroid 40.7 1.8E+02 0.0062 25.2 11.2 103 110-218 10-116 (255)
385 3guy_A Short-chain dehydrogena 40.7 54 0.0019 28.5 6.6 96 114-219 4-102 (230)
386 3kzv_A Uncharacterized oxidore 40.4 1.2E+02 0.004 26.8 8.9 99 114-219 5-109 (254)
387 3flu_A DHDPS, dihydrodipicolin 39.9 85 0.0029 28.9 8.0 57 170-229 22-81 (297)
388 1ja9_A 4HNR, 1,3,6,8-tetrahydr 39.7 1.2E+02 0.0041 26.8 9.0 102 111-218 21-128 (274)
389 3dqp_A Oxidoreductase YLBE; al 39.2 89 0.003 26.7 7.7 68 114-199 3-71 (219)
390 3f1l_A Uncharacterized oxidore 38.9 2E+02 0.0068 25.2 10.5 105 111-219 12-123 (252)
391 1spx_A Short-chain reductase f 38.9 1.2E+02 0.0041 27.0 8.9 83 112-200 7-94 (278)
392 3i6i_A Putative leucoanthocyan 38.9 1.1E+02 0.0039 28.3 8.9 102 112-233 11-120 (346)
393 3asu_A Short-chain dehydrogena 37.9 74 0.0025 28.1 7.1 98 114-218 3-104 (248)
394 3dhn_A NAD-dependent epimerase 37.6 1E+02 0.0035 26.3 7.9 70 112-198 5-74 (227)
395 2wkj_A N-acetylneuraminate lya 37.3 1.1E+02 0.0037 28.2 8.3 57 170-229 26-85 (303)
396 3tak_A DHDPS, dihydrodipicolin 37.0 96 0.0033 28.4 7.8 57 170-229 16-75 (291)
397 3fkr_A L-2-keto-3-deoxyarabona 36.9 1.1E+02 0.0037 28.4 8.2 92 114-233 80-175 (309)
398 3ovp_A Ribulose-phosphate 3-ep 36.7 2.1E+02 0.0071 25.0 9.7 17 148-165 79-95 (228)
399 4gqr_A Pancreatic alpha-amylas 36.4 23 0.00077 35.1 3.6 29 207-235 73-101 (496)
400 1tqj_A Ribulose-phosphate 3-ep 36.4 1.8E+02 0.0063 25.4 9.4 7 224-230 173-179 (230)
401 3zu3_A Putative reductase YPO4 36.3 3E+02 0.01 26.5 14.3 105 86-199 24-144 (405)
402 1xky_A Dihydrodipicolinate syn 36.3 1E+02 0.0036 28.4 8.0 51 170-223 27-77 (301)
403 1gee_A Glucose 1-dehydrogenase 36.1 1.4E+02 0.0048 26.1 8.8 102 111-218 7-114 (261)
404 2ojp_A DHDPS, dihydrodipicolin 35.8 1E+02 0.0035 28.2 7.8 51 170-223 16-66 (292)
405 3dz1_A Dihydrodipicolinate syn 35.5 90 0.0031 29.0 7.4 57 170-229 23-81 (313)
406 3e48_A Putative nucleoside-dip 35.4 69 0.0024 28.8 6.6 95 114-225 3-98 (289)
407 2h7i_A Enoyl-[acyl-carrier-pro 35.4 1.7E+02 0.0058 25.9 9.2 101 111-218 7-121 (269)
408 2orv_A Thymidine kinase; TP4A 35.3 2.2E+02 0.0076 25.1 9.5 107 120-251 33-141 (234)
409 2zcu_A Uncharacterized oxidore 34.8 1.5E+02 0.0052 26.2 8.9 93 114-225 2-96 (286)
410 2ekp_A 2-deoxy-D-gluconate 3-d 34.6 1.6E+02 0.0054 25.5 8.7 93 113-218 4-99 (239)
411 4gfq_A Ribosome-recycling fact 34.4 1.7E+02 0.006 25.3 8.4 57 380-450 102-158 (209)
412 3qvo_A NMRA family protein; st 34.3 1.4E+02 0.0047 25.9 8.2 71 112-198 24-95 (236)
413 2bd0_A Sepiapterin reductase; 34.1 2.2E+02 0.0075 24.5 9.6 99 114-218 5-115 (244)
414 1yo6_A Putative carbonyl reduc 34.0 2.2E+02 0.0077 24.3 11.2 100 113-218 5-111 (250)
415 3f9i_A 3-oxoacyl-[acyl-carrier 34.0 1.1E+02 0.0038 26.7 7.6 80 110-200 13-92 (249)
416 2nm0_A Probable 3-oxacyl-(acyl 33.9 1.7E+02 0.0058 25.8 8.9 74 111-198 21-94 (253)
417 2gjx_A Beta-hexosaminidase alp 33.7 51 0.0018 33.1 5.7 27 203-229 207-233 (507)
418 3afn_B Carbonyl reductase; alp 33.7 2.3E+02 0.008 24.5 11.3 102 111-218 7-115 (258)
419 2jl1_A Triphenylmethane reduct 33.6 1.6E+02 0.0054 26.1 8.8 95 114-225 3-99 (287)
420 1qsg_A Enoyl-[acyl-carrier-pro 33.4 2.5E+02 0.0085 24.7 10.1 82 112-200 10-95 (265)
421 1edo_A Beta-keto acyl carrier 33.4 2.3E+02 0.0079 24.3 10.7 99 114-218 4-108 (244)
422 2pju_A Propionate catabolism o 33.3 2.5E+02 0.0084 24.6 11.5 97 87-202 20-117 (225)
423 3icc_A Putative 3-oxoacyl-(acy 33.2 1.8E+02 0.0062 25.2 9.0 101 111-218 7-120 (255)
424 2q1w_A Putative nucleotide sug 33.0 2.6E+02 0.0088 25.5 10.4 101 112-225 22-129 (333)
425 2hq1_A Glucose/ribitol dehydro 32.8 2E+02 0.0068 24.8 9.1 81 111-197 5-89 (247)
426 4dpp_A DHDPS 2, dihydrodipicol 32.8 1.5E+02 0.005 28.2 8.4 57 170-229 74-133 (360)
427 3i4f_A 3-oxoacyl-[acyl-carrier 32.6 1.8E+02 0.0063 25.5 9.0 100 112-218 8-116 (264)
428 2q5c_A NTRC family transcripti 32.3 2.3E+02 0.008 24.0 13.3 75 115-204 33-107 (196)
429 3si9_A DHDPS, dihydrodipicolin 32.2 94 0.0032 28.9 6.9 57 170-229 37-96 (315)
430 2ya0_A Putative alkaline amylo 32.2 25 0.00086 37.1 3.2 26 210-235 254-279 (714)
431 1bqc_A Protein (beta-mannanase 32.1 94 0.0032 28.4 7.0 21 210-230 64-84 (302)
432 3qze_A DHDPS, dihydrodipicolin 32.0 93 0.0032 28.9 6.9 49 171-222 39-87 (314)
433 1xq1_A Putative tropinone redu 32.0 2.6E+02 0.0088 24.4 9.9 102 111-218 14-121 (266)
434 3dhu_A Alpha-amylase; structur 31.9 68 0.0023 31.4 6.3 27 209-235 82-108 (449)
435 1f6k_A N-acetylneuraminate lya 31.9 1.1E+02 0.0038 28.0 7.4 49 171-222 19-68 (293)
436 3ctm_A Carbonyl reductase; alc 31.9 1.5E+02 0.0052 26.3 8.3 83 110-198 33-118 (279)
437 2nu8_A Succinyl-COA ligase [AD 31.7 56 0.0019 30.0 5.2 75 143-234 51-125 (288)
438 2r8w_A AGR_C_1641P; APC7498, d 31.6 1.2E+02 0.004 28.5 7.6 48 172-222 51-98 (332)
439 3m5v_A DHDPS, dihydrodipicolin 31.6 95 0.0032 28.6 6.8 56 171-229 23-82 (301)
440 3uf0_A Short-chain dehydrogena 31.4 2.8E+02 0.0095 24.6 11.5 102 109-219 29-136 (273)
441 3h5d_A DHDPS, dihydrodipicolin 31.4 93 0.0032 28.9 6.8 49 171-222 23-71 (311)
442 4da9_A Short-chain dehydrogena 31.1 1.9E+02 0.0065 25.9 8.8 102 111-218 29-138 (280)
443 3rku_A Oxidoreductase YMR226C; 31.0 1E+02 0.0036 27.9 7.0 103 111-219 33-146 (287)
444 2yl5_A Beta-N-acetylhexosamini 30.9 38 0.0013 33.4 4.1 29 201-229 85-113 (442)
445 2vc6_A MOSA, dihydrodipicolina 30.8 1.5E+02 0.005 27.1 8.0 88 114-231 72-163 (292)
446 2ph3_A 3-oxoacyl-[acyl carrier 30.7 2.6E+02 0.0087 24.0 9.8 99 114-218 4-109 (245)
447 1w3i_A EDA, 2-keto-3-deoxy glu 30.6 1.3E+02 0.0043 27.6 7.5 51 170-223 14-64 (293)
448 1g94_A Alpha-amylase; beta-alp 30.5 33 0.0011 33.8 3.6 27 209-235 63-89 (448)
449 3b4u_A Dihydrodipicolinate syn 30.3 1.3E+02 0.0045 27.6 7.5 51 170-223 18-68 (294)
450 3r6d_A NAD-dependent epimerase 30.1 1.4E+02 0.005 25.3 7.6 71 114-198 8-80 (221)
451 1cyd_A Carbonyl reductase; sho 30.0 2.6E+02 0.009 23.9 9.9 99 109-218 5-105 (244)
452 3qp9_A Type I polyketide synth 29.9 1.8E+02 0.0061 29.2 9.1 103 109-218 248-371 (525)
453 2ehh_A DHDPS, dihydrodipicolin 29.8 1.6E+02 0.0056 26.8 8.1 77 114-217 72-151 (294)
454 2r6j_A Eugenol synthase 1; phe 29.7 1.1E+02 0.0037 27.9 7.0 91 113-224 13-106 (318)
455 2ojp_A DHDPS, dihydrodipicolin 29.6 2.8E+02 0.0094 25.2 9.7 77 114-218 73-153 (292)
456 4a29_A Engineered retro-aldol 29.6 85 0.0029 28.3 5.8 81 137-233 81-161 (258)
457 1xgk_A Nitrogen metabolite rep 29.5 3.2E+02 0.011 25.3 10.4 96 112-224 6-103 (352)
458 2nuw_A 2-keto-3-deoxygluconate 29.3 1.2E+02 0.0041 27.7 7.0 50 171-223 15-64 (288)
459 1fob_A Beta-1,4-galactanase; B 29.1 1.8E+02 0.0061 27.2 8.4 37 200-236 49-85 (334)
460 3ew7_A LMO0794 protein; Q8Y8U8 29.0 1.1E+02 0.0036 25.9 6.5 50 114-166 3-52 (221)
461 1qyc_A Phenylcoumaran benzylic 29.0 1.1E+02 0.0039 27.5 7.0 92 112-224 5-104 (308)
462 1vhx_A Putative holliday junct 29.0 81 0.0028 25.8 5.2 60 171-235 40-102 (150)
463 3d3w_A L-xylulose reductase; u 28.7 2.8E+02 0.0095 23.8 9.9 97 110-218 6-105 (244)
464 2p91_A Enoyl-[acyl-carrier-pro 28.6 3.1E+02 0.011 24.3 9.9 100 112-218 22-132 (285)
465 1hjs_A Beta-1,4-galactanase; 4 28.5 1.2E+02 0.004 28.5 7.0 37 200-236 49-85 (332)
466 1oaa_A Sepiapterin reductase; 28.3 3E+02 0.01 24.0 11.2 104 111-219 6-125 (259)
467 3s5o_A 4-hydroxy-2-oxoglutarat 28.3 89 0.003 28.9 6.0 57 170-229 29-88 (307)
468 1qyd_A Pinoresinol-lariciresin 28.2 1.2E+02 0.004 27.5 6.9 95 113-224 6-107 (313)
469 2zat_A Dehydrogenase/reductase 28.0 3E+02 0.01 24.0 10.5 101 111-218 14-121 (260)
470 2et6_A (3R)-hydroxyacyl-COA de 28.0 3.9E+02 0.013 27.2 11.4 97 113-219 324-425 (604)
471 2pd4_A Enoyl-[acyl-carrier-pro 28.0 3.1E+02 0.011 24.2 11.7 101 111-218 6-117 (275)
472 3fkr_A L-2-keto-3-deoxyarabona 28.0 77 0.0026 29.4 5.5 51 170-223 23-73 (309)
473 2qq5_A DHRS1, dehydrogenase/re 28.0 3E+02 0.01 24.0 9.7 82 112-200 6-91 (260)
474 3k31_A Enoyl-(acyl-carrier-pro 27.9 2.9E+02 0.01 24.8 9.6 102 110-219 29-142 (296)
475 2ehh_A DHDPS, dihydrodipicolin 27.9 1.3E+02 0.0045 27.5 7.1 48 172-222 17-64 (294)
476 4dzz_A Plasmid partitioning pr 27.7 1.4E+02 0.0047 24.9 6.9 61 119-184 60-120 (206)
477 2yl6_A Beta-N-acetylhexosamini 27.7 36 0.0012 33.5 3.3 28 202-229 83-110 (434)
478 3og9_A Protein YAHD A copper i 27.6 2.6E+02 0.0088 23.0 12.9 108 109-223 99-208 (209)
479 3ic5_A Putative saccharopine d 27.6 1.8E+02 0.0063 21.3 7.6 90 113-228 7-97 (118)
480 2wyu_A Enoyl-[acyl carrier pro 27.5 3E+02 0.01 24.1 9.5 101 111-218 8-119 (261)
481 3u0b_A Oxidoreductase, short c 27.4 2.4E+02 0.0081 27.6 9.3 98 113-218 215-317 (454)
482 1u83_A Phosphosulfolactate syn 27.4 2.3E+02 0.0078 25.7 8.2 110 91-233 82-194 (276)
483 3o9z_A Lipopolysaccaride biosy 27.4 1.1E+02 0.0037 28.3 6.5 27 208-234 107-133 (312)
484 3oig_A Enoyl-[acyl-carrier-pro 27.3 3.1E+02 0.011 23.9 10.4 104 109-218 5-120 (266)
485 1f6k_A N-acetylneuraminate lya 27.3 1.7E+02 0.0057 26.8 7.7 88 114-231 76-166 (293)
486 1mxh_A Pteridine reductase 2; 27.2 2.3E+02 0.0077 25.1 8.6 82 113-200 13-102 (276)
487 1dd5_A Ribosome recycling fact 27.1 1.4E+02 0.0048 25.4 6.4 58 379-450 77-134 (185)
488 1e7w_A Pteridine reductase; di 27.1 2.2E+02 0.0077 25.5 8.6 32 111-142 9-40 (291)
489 2yv2_A Succinyl-COA synthetase 27.1 79 0.0027 29.1 5.4 48 175-234 85-132 (297)
490 2epl_X N-acetyl-beta-D-glucosa 27.0 5.3E+02 0.018 26.4 12.6 107 109-229 43-163 (627)
491 2yxg_A DHDPS, dihydrodipicolin 26.9 1.2E+02 0.0042 27.7 6.7 48 172-222 17-64 (289)
492 2v9d_A YAGE; dihydrodipicolini 26.9 1.1E+02 0.0036 29.0 6.3 48 172-222 48-95 (343)
493 2yv1_A Succinyl-COA ligase [AD 26.8 57 0.002 30.1 4.4 38 191-234 94-131 (294)
494 4id9_A Short-chain dehydrogena 26.7 2.5E+02 0.0086 25.6 9.1 94 110-225 18-118 (347)
495 2yxb_A Coenzyme B12-dependent 26.7 1.5E+02 0.0053 24.2 6.7 56 152-224 42-97 (161)
496 2nwq_A Probable short-chain de 26.6 1.6E+02 0.0055 26.3 7.4 101 112-218 22-127 (272)
497 3l2f_A Glycocyamine kinase bet 26.6 2.7E+02 0.0091 26.7 9.0 74 359-439 305-383 (390)
498 1lwj_A 4-alpha-glucanotransfer 26.5 43 0.0015 32.8 3.6 27 209-235 68-94 (441)
499 2yvq_A Carbamoyl-phosphate syn 26.5 2.5E+02 0.0085 22.5 8.8 108 109-230 22-131 (143)
500 3a5f_A Dihydrodipicolinate syn 26.4 1.4E+02 0.0047 27.3 7.0 47 173-222 19-65 (291)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7e-58 Score=467.48 Aligned_cols=432 Identities=81% Similarity=1.297 Sum_probs=352.3
Q ss_pred CCccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc
Q 043923 1 MGLLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA 80 (469)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (469)
|+|||.++.+.+++.++||+..|+.+..++|++..+|.++|+|+.++|+++.+.+.+++++.........+|........
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (435)
T 3piu_A 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELA 80 (435)
T ss_dssp -----------------CTTHHHHHHHHSBCBTTTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHH
T ss_pred CCccchhhhhcccccCcchhhHHHHhhcCCCCcccCCCCeEEeccccccccHHHHHHHHHhCcccccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999999999886543222212222234457
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh-hhCCCE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK-WRTGVE 159 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-~~~g~~ 159 (469)
.|++..|..+|++++|+++++.++.++++++++|++|+|+++|+..++.+++++||.|+++.|+|..+...+. .. |++
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~-g~~ 159 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRT-GVE 159 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTT-CCE
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhc-CCE
Confidence 8999999999999999999987776667789999999999999999999999999999999999999988887 55 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
++.++++.+++|.+|++++++++++....+.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.|+
T Consensus 160 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 239 (435)
T 3piu_A 160 IVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239 (435)
T ss_dssp EEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS
T ss_pred EEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 99999987778899999999999876555668999999999999999999999999999999999999999999988887
Q ss_pred CCCccchhhhhhccccc-cCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcC
Q 043923 240 SPGFVSIMEILKDRNCE-NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSD 318 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 318 (469)
+..+.++..+..+.++. ..+..+++++++|+||+||++|+|+||++++++.+.+.+.....++..+++.|.++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 240 SPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSD 319 (435)
T ss_dssp SSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHC
T ss_pred CCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcC
Confidence 76666766664410000 00005788999999999999999999999977777777777766777889999999999998
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
..++.+++++.+++++++++++.+.|++.|+++.++.+|+|+|++++............+++..+++++||.+.||..|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 399 (435)
T 3piu_A 320 KKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH 399 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC
Confidence 87767788889999999999999999999999999999999999998654333333456788888887899999999998
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 399 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 399 ~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..+++++||+++..+++++++++++|++++++.++
T Consensus 400 ~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~~ 434 (435)
T 3piu_A 400 CTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYYN 434 (435)
T ss_dssp CSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHhC
Confidence 77789999999856999999999999999987653
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=4.7e-55 Score=445.56 Aligned_cols=427 Identities=56% Similarity=1.048 Sum_probs=343.5
Q ss_pred ccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccC
Q 043923 3 LLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALF 82 (469)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 82 (469)
+||+|++++......||+..|.++..++|++..++.++|+|+.|+|+++++.+.+++++.+...+.. ++...+.....|
T Consensus 1 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~Y 79 (428)
T 1iay_A 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICS-EGIKSFKAIANF 79 (428)
T ss_dssp CCCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC-----CHHHHHHC
T ss_pred CcccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccchhhHHHHHHHHHhcccccccc-ccccccHhhcCC
Confidence 6899999999888899999999999999999999889999999999999888999988654322111 111112345689
Q ss_pred CCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEE
Q 043923 83 QDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (469)
Q Consensus 83 ~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~ 162 (469)
++..|..+|++++|+++++.++..+++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+....|++++.
T Consensus 80 ~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~ 159 (428)
T 1iay_A 80 QDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIP 159 (428)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEE
Confidence 98888999999999999988775544678999999999999999999999999999999999999987554323999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+|++.+++|.+|++++++++++....++++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.|++..
T Consensus 160 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~ 239 (428)
T 1iay_A 160 IHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239 (428)
T ss_dssp ECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSC
T ss_pred eecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCC
Confidence 99876567889999999998764334457899999999999999999999999999999999999999999987776554
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhh
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 322 (469)
+.++..+..... ...-..++++++.|+||+||++|+|+||++++++.+.+.+.....++.+++++|.++.+++.+..+.
T Consensus 240 ~~~~~~~~~~~~-~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 318 (428)
T 1iay_A 240 FVSIAEILDEQE-MTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFV 318 (428)
T ss_dssp CCCHHHHHTSGG-GTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHH
T ss_pred ccCHHHhccccc-cccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHH
Confidence 456555533100 0000147899999999999999999999999666666666655555668899999999999987755
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
.+++++.++.++++++++.+.|+++|+++.++.+|+|+|++++............++++.+++++||.+.||..|+..++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~ 398 (428)
T 1iay_A 319 DNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEP 398 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 67788899999999999999999989988888788999999975432122123446777777667999999998876557
Q ss_pred CeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 403 GWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 403 ~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+++||+++..+++++++++++|++++++.
T Consensus 399 ~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 399 GWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp SEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 89999998559999999999999998764
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4.1e-48 Score=388.92 Aligned_cols=350 Identities=18% Similarity=0.390 Sum_probs=286.1
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|..+||+++++++++.++ +.+++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 96 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALA------------QGKTKYAPPAGIPELREALAEKFRRENG--LSVTPEETIV 96 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHTTC--CCCCGGGEEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 47899999999875 4556665544210 1134688888999999999999987766 4467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|+++.|+|..+...++.. |++++.+|++.+++|.+|++++++++++ ++++|+
T Consensus 97 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (385)
T 1b5p_A 97 TVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFA-GGVVVEVETLPEEGFVPDPERVRRAITP------RTKALV 169 (385)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEE
Confidence 999999999999999999999999999999999888877 9999999997656788999999988754 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++||||||.++|.+++++|+++|++||++||+||+|+++.+++ .+.++.++ . . +++++++||||+||+
T Consensus 170 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~-~--------~-~~~i~~~s~SK~~~~ 238 (385)
T 1b5p_A 170 VNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRV-A--------P-EHTLTVNGAAKAFAM 238 (385)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGT-C--------T-TTEEEEEESTTTTTC
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHc-C--------C-CCEEEEEechhhcCC
Confidence 99999999999999999999999999999999999999877765 44455544 1 2 789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
+|+|+||+++++. +.+.+..... .++++.+.|.++.++|.......+++++.++.++++++++.+.|+++|+++.++
T Consensus 239 ~G~RiG~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 317 (385)
T 1b5p_A 239 TGWRIGYACGPKE-VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRP 317 (385)
T ss_dssp GGGCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC
T ss_pred cccceEEEEeCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 9999999999544 4444444332 235788999998888875211145688889999999999999999889998889
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++++|+|+.++.. . .+..++++.++ ++||.+.||..|+. ++++||+++ .+++++++++++|+++++
T Consensus 318 ~~~~~~~~~~~~~-~----~~~~~l~~~l~-~~gv~v~~g~~f~~--~~~iRis~~-~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 318 SGAFYVLMDTSPI-A----PDEVRAAERLL-EAGVAVVPGTDFAA--FGHVRLSYA-TSEENLRKALERFARVLG 383 (385)
T ss_dssp SBTTEEEEECTTT-C----SSHHHHHHHHH-HTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred CeeEEEEEecCCC-C----CCHHHHHHHHH-HCCeEEecccccCC--CCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 9999999998631 0 12346777777 77999999999864 679999998 599999999999987764
No 4
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=4.6e-47 Score=393.88 Aligned_cols=379 Identities=18% Similarity=0.283 Sum_probs=299.5
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+++|+++.+...+|++.+..+.+..... . -.....|++..|..+||+++|++++++++ +++++++|++|
T Consensus 95 p~~i~~~~~~~~~p~~~~~~a~~~l~~~-----~----~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t 163 (500)
T 3tcm_A 95 PDLLQREEIKTLFSADSISRAKQILAMI-----P----GRATGAYSHSQGIHGLRDAIASGIASRDG--FPANADDIFLT 163 (500)
T ss_dssp GGGGGCTTHHHHSCHHHHHHHHHHHTTS-----T----TSCSSSCCCTTCCHHHHHHHHHHHHHHHS--SCCCGGGEEEE
T ss_pred cccccCCCCcccCCHHHHHHHHHHHHcC-----C----CCcCCCcCCCcChHHHHHHHHHHHHhhcC--CCCCcccEEEc
Confidence 4567777764444555555553332110 0 01356799999999999999999988876 45788999999
Q ss_pred CChHHHHHHHHHHhc-CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 118 AGATSANETLMFCLA-EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 118 ~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+|+++++..++.+++ ++||.|+++.|+|..+...+... |.+++.++++++++|.+|+++|++++++....+.++++|+
T Consensus 164 ~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~iv 242 (500)
T 3tcm_A 164 DGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH-GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALV 242 (500)
T ss_dssp SSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT-TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEE
Confidence 999999999999998 89999999999999999998887 9999999999888899999999999987655556899999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC-CCccchhhhhhccccccCCcCCeEEEEccCcccc-
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL- 274 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~- 274 (469)
++||+||||.++|.+++++|+++|++||+++|+||+|.++.|++ ..+.++..+..+++. .....++++++|+||+|
T Consensus 243 l~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~~i~~~S~SK~~~ 320 (500)
T 3tcm_A 243 VINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGY--GEEDLPLVSYQSVSKGYY 320 (500)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTC--SSSCCCEEEEEESSSTTT
T ss_pred EECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcc--ccCCeEEEEEecCCccCC
Confidence 99999999999999999999999999999999999999988864 345666655442200 00224589999999999
Q ss_pred CCCcceEEEEEe---cCHHHHHHHHHh-cccccCcHHHHHHHHHHhcCch--------hhHHHHHHHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYS---NDDMVVAAATKM-SSFGLVSSQTQYLLSALLSDKK--------FTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 275 g~~GlRiG~li~---~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~~--------~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
|++|+|+||+++ ++..+ +.+.+. ...++++.+.|.++..++.... + .++++..+++++++++++.+
T Consensus 321 g~~G~R~G~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~ 398 (500)
T 3tcm_A 321 GECGKRGGYFEITGFSAPVR-EQIYKIASVNLCSNITGQILASLVMNPPKASDESYASY-KAEKDGILASLARRAKALEH 398 (500)
T ss_dssp CCGGGCCEEEEEESCCTTHH-HHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccceEEEEEeCCCHHHH-HHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 899999999998 55444 434333 3345578899999999987532 3 56677788899999999999
Q ss_pred HHHhc-CCceecCCceEEEEEecc--ccc-c---cCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeecCCH
Q 043923 343 GLEKA-GISCLKSNAGLFCWVDMR--HLL-R---SNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFANMSE 414 (469)
Q Consensus 343 ~L~~~-g~~v~~~~~g~~~~v~~~--~~~-~---~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~~~~ 414 (469)
.|+++ |+++.++++|+|+|+++. ... . ......+..++.++++++||.+.||+.|+. .+.+++|++++ .++
T Consensus 399 ~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~ 477 (500)
T 3tcm_A 399 AFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQE 477 (500)
T ss_dssp HHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCT
T ss_pred HHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCH
Confidence 99998 899999999999996543 210 0 001122334567788888999999999985 45679999999 699
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 043923 415 DTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 415 e~i~~~l~~L~~~l~~~~~ 433 (469)
+++++++++|++++++..+
T Consensus 478 e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 478 DKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987765
No 5
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=3.6e-47 Score=383.45 Aligned_cols=372 Identities=15% Similarity=0.154 Sum_probs=281.9
Q ss_pred ccccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeecccc------ccChHHHHHHHhcCCCccccccCCcccc
Q 043923 3 LLSGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAEN------QLSFDLLESWLDRNPDAAGFKRDGQSIF 76 (469)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (469)
|+|.+ .....-+.++++.-........ ..++|||++|+. +.+++.+.++.. .... -
T Consensus 1 ~~~~~-~~~~~~~~~~i~~~~~~~~~~~------~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~----------~ 62 (405)
T 3k7y_A 1 MDKLL-SSLENIEVDNILKTAREFKEDT------CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTE----------N 62 (405)
T ss_dssp CCCGG-GGCCCCCCCHHHHHHHHHTTSS------CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHH----------H
T ss_pred Ccchh-hcCCCCCCChHHHHHHHHhcCC------CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcC----------C
Confidence 45544 3444555566665544443332 247899999962 123466666643 2000 0
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHH
Q 043923 77 RELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK--IVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 77 ~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~ 152 (469)
.....|++..|.++||+++++++.+..+ ..+++++ |++|+|+++|+.+++.++.. + |+|++++|+|..|...+
T Consensus 63 ~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~ 139 (405)
T 3k7y_A 63 YKEKPYLLGNGTEDFSTLTQNLIFGNNS--KYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMI 139 (405)
T ss_dssp CCCCCCCTTSSCHHHHHHHHHHHHCSSC--TTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHH
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHcCCCC--ccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHH
Confidence 2356899999999999999999965543 2245664 59999999999999999987 8 99999999999999999
Q ss_pred hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
+.. |++++.+|+..+++|.+|++++++++++. ++++++++++| |||||.+++.+++++|+++|++|+++||+||
T Consensus 140 ~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De 214 (405)
T 3k7y_A 140 ESR-GFNLKYINFFDYNLIDINYDLFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDI 214 (405)
T ss_dssp HTT-TCEEEEECCEETTTTEECHHHHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHc-CCeEEEEeccccccCCcCHHHHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEec
Confidence 887 99999999844457899999999998741 24577777665 8999999999999999999999999999999
Q ss_pred cccccccCCC--CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe--cCHHHHHHH----HHh--ccc
Q 043923 232 IYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS--NDDMVVAAA----TKM--SSF 301 (469)
Q Consensus 232 ay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~--~~~~~~~~~----~~~--~~~ 301 (469)
+|.++.+++. ...++..+.. ..+++++++||||+||++|+|+||+++ +++.+.+.+ ... ..+
T Consensus 215 ~Y~~l~~~~~~~~~~~~~~~~~--------~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 286 (405)
T 3k7y_A 215 AYQGFGHTNLEEDVLLIRKFEE--------KNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFY 286 (405)
T ss_dssp SCTTTSSSSTTGGGHHHHHHHT--------TTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTT
T ss_pred CcccccCCCcccchHHHHHHHh--------cCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhccc
Confidence 9999876532 1223333332 347899999999999999999999864 344443322 222 223
Q ss_pred ccCcHHHHHHHHHHhcCchhh---HHHHHHHHHHHHHHHHHHHHHHH----hcC----CceecCCceEEEEEeccccccc
Q 043923 302 GLVSSQTQYLLSALLSDKKFT---QNYISENKKRLKQRHRKLVSGLE----KAG----ISCLKSNAGLFCWVDMRHLLRS 370 (469)
Q Consensus 302 ~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~----~~g----~~v~~~~~g~~~~v~~~~~~~~ 370 (469)
.+++.+.|.++..+|.+..+. .++++..+++++++|+.+.+.|+ ++| |++.++++|||+|+.++.
T Consensus 287 ~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~---- 362 (405)
T 3k7y_A 287 SSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA---- 362 (405)
T ss_dssp SSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG----
T ss_pred CCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH----
Confidence 345678999999999885321 45567778889999999999999 776 578899999999998763
Q ss_pred CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 371 NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 371 ~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+++.+| +++||.+.||. |||++.++++++++++++|+++++.
T Consensus 363 -------~~~~~L-~~~gV~v~p~~----------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 363 -------KIAEHL-KTHHIYIINNG----------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -------GGTTTT-TTTTEECCTTS----------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -------HHHHHH-HHCCEeecCCC----------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 234556 78999999862 9999888999999999999998864
No 6
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=6.8e-46 Score=373.63 Aligned_cols=352 Identities=16% Similarity=0.287 Sum_probs=288.7
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCCC-
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT-FDTS- 112 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~- 112 (469)
...++|||+.|+++++ ++.+.+++.+. ......|++..|..+||+++++++.+.++ +. ++++
T Consensus 28 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~ 92 (396)
T 3jtx_A 28 EGMEAVPLHIGEPKHPTPKVITDALTAS-------------LHELEKYPLTAGLPELRQACANWLKRRYD--GLTVDADN 92 (396)
T ss_dssp TTCCCEECSCCSCCSCCCHHHHHHHHHT-------------GGGGGSCCCTTCCHHHHHHHHHHHHHHTT--TCCCCTTT
T ss_pred cCCCeEEeCCcCCCCCCCHHHHHHHHHH-------------hhhccCCCCCCCcHHHHHHHHHHHHHhcC--CCCCCCCC
Confidence 3457899999999886 56777777764 23467899888999999999999988876 33 5688
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC-----CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 113 KIVLTAGATSANETLMFCLAEPG-----EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~g-----d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
+|++|+|+++++..++.+++++| |.|+++.|+|..+...+... |++++.+|++ +++|.+|++++++++++
T Consensus 93 ~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~g~~~d~~~l~~~~~~--- 167 (396)
T 3jtx_A 93 EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLG-GGEIHFANCP-APSFNPDWRSISEEVWK--- 167 (396)
T ss_dssp SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHT-TCEEEEEECC-TTTCCCCGGGSCHHHHH---
T ss_pred eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHc-CCEEEEeecC-CCCCccCHHHHHHhhcc---
Confidence 99999999999999999999997 79999999999999888877 9999999984 46788999999999876
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....+.......+. ...++++++
T Consensus 168 ---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ 240 (396)
T 3jtx_A 168 ---RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG----RSRQKLLMF 240 (396)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTT----CCCTTEEEE
T ss_pred ---CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcc----cccCcEEEE
Confidence 8999999999999999999999999999999999999999999987776633344433221000 024789999
Q ss_pred ccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 268 YSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
+|+||+||++|+|+||++++++ +.+.+..... .++++++.|.++.+++.+.. ++++.+++++++++.+.+.|+
T Consensus 241 ~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~ 315 (396)
T 3jtx_A 241 TSLSKRSNVPGLRSGFVAGDAE-LLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQ----HVIDNRRLYQEKFERVIPILQ 315 (396)
T ss_dssp EESTTTSSCGGGCCEEEEECHH-HHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHT
T ss_pred eccccccCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998544 4444443322 24578899999999887643 478888999999999999998
Q ss_pred hcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC------CCCCeEEEEeecCCHHHHHH
Q 043923 346 KAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC------TEPGWFRVCFANMSEDTLKL 419 (469)
Q Consensus 346 ~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~------~~~~~iRi~~~~~~~e~i~~ 419 (469)
+. +.+..+.+|+|+|++++. .+..+++..+++++||.+.||+.|+. ..++++||+++. +++++++
T Consensus 316 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~ 386 (396)
T 3jtx_A 316 QV-FDVKLPDASFYIWLKVPD-------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVK 386 (396)
T ss_dssp TT-SCCCCCSSSSEEEEECTT-------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHH
T ss_pred hc-CCccCCCeeEEEEEECCC-------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHH
Confidence 76 566778889999999985 12346778887888999999999875 346899999986 9999999
Q ss_pred HHHHHHHHH
Q 043923 420 SMQRLKAFV 428 (469)
Q Consensus 420 ~l~~L~~~l 428 (469)
++++|++++
T Consensus 387 ~l~~l~~~l 395 (396)
T 3jtx_A 387 AAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999999875
No 7
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-46 Score=385.35 Aligned_cols=359 Identities=19% Similarity=0.306 Sum_probs=290.4
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+.|.+.++ ++.+.+++.+.... .....|++..|..+|++++|+++.+.++ .++++++|+
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~ 122 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDI-----------PMVNQYSPTRGRPSLINSLIKLYSPIYN--TELKAENVT 122 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTS-----------GGGGSCCCTTCCHHHHHHHHHHHTTTTT--SCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 457899999988764 56677777664211 1245799888999999999999987766 346778999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCC----------CcccCHHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLN----------GFQITETAIEEAYQLA 185 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~----------~~~~d~~~l~~~i~~~ 185 (469)
+|+|+++|+..++.+++++||.|+++.|+|..+...+... |.+++.+|++.++ +|.+|++++++++++
T Consensus 123 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~- 200 (447)
T 3b46_A 123 VTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELC-GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS- 200 (447)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-
Confidence 9999999999999999999999999999999999988877 9999999987542 678999999988753
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++|++++|+||||.++|.+++++|+++|++||++||+||+|.++.|++ .+.++..+.++ ..++++
T Consensus 201 -----~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-------~~~~~i 267 (447)
T 3b46_A 201 -----KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPE-------IGQLTL 267 (447)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHH-------HHTTEE
T ss_pred -----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCC-------CCCcEE
Confidence 78999999999999999999999999999999999999999999887765 33454444110 237899
Q ss_pred EEccCccccCCCcceEEEEEe-cCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYS-NDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~-~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
+++|+||+||++|+|+||+++ ++. +.+.+.... ..++.+++.|.++.++|+.... .+++++.++.++++++++.+
T Consensus 268 ~i~S~sK~~~~~G~riG~~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~-~~~~~~~~~~~~~~~~~l~~ 345 (447)
T 3b46_A 268 TVGSAGKSFAATGWRIGWVLSLNAE-LLSYAAKAHTRICFASPSPLQEACANSINDALK-IGYFEKMRQEYINKFKIFTS 345 (447)
T ss_dssp EEEEHHHHTTCTTSCCEEEECSCHH-HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHH
T ss_pred EEecCchhcCCcchhhEEEEeCCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHhCCcc-hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 554 444443322 2344788899998888876433 55688889999999999999
Q ss_pred HHHhcCCceecCCceEEEEEecccccccCC---------hhHHHHHHHHHHHhCCeEEeCCCCCCCC-----CCCeEEEE
Q 043923 343 GLEKAGISCLKSNAGLFCWVDMRHLLRSNT---------FEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVC 408 (469)
Q Consensus 343 ~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~---------~~~~~~l~~~ll~~~GI~v~pg~~f~~~-----~~~~iRi~ 408 (469)
.|+++|+++..+.+|+|+|++++....... ..+..+++.++++++||.+.||+.|+.. .++++||+
T Consensus 346 ~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls 425 (447)
T 3b46_A 346 IFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA 425 (447)
T ss_dssp HHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEE
T ss_pred HHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEE
Confidence 999999999888999999999975210000 1234567888887889999999988753 26799999
Q ss_pred eecCCHHHHHHHHHHHHH
Q 043923 409 FANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 409 ~~~~~~e~i~~~l~~L~~ 426 (469)
++. +++++++++++|++
T Consensus 426 ~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 426 VCK-DDAYLENAVERLKL 442 (447)
T ss_dssp CCS-CHHHHHHHHHHGGG
T ss_pred EeC-CHHHHHHHHHHHHH
Confidence 985 89999999999987
No 8
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=2.3e-45 Score=376.20 Aligned_cols=361 Identities=18% Similarity=0.287 Sum_probs=290.5
Q ss_pred CCeeeeecccccc---ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 38 TGIIQMGLAENQL---SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
+++|+|+.|.+.. |++.+.+++.+.... .......|++..|..+||+++|+++.+.++ ++ ++++|
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~---------~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~-~~~~v 143 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEK---------YADKALQYGTTKGFTPLRETLMKWLGKRYG--IS-QDNDI 143 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHH---------SHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CC-TTSEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHh---------hhHHHhCCCCCCCcHHHHHHHHHHHHHhcC--cC-ChhhE
Confidence 3689999886543 556666666552100 001245798888999999999999977666 33 78999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|++.+ .+|+++|+++++.....+.++++
T Consensus 144 ~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 144 MITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFY-EPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeE
Confidence 99999999999999999999999999999999999988877 999999998753 38999999988621111237888
Q ss_pred E-EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 195 V-LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 195 v-vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
| ++++|+||||.++|.+++++|+++|++||++||+||+|.++.|++....++..+. ..+++++++||||+
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~---------~~~~vi~~~S~SK~ 290 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALD---------NEGRVIYLGTFSKI 290 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC---------TTSCEEEEEESTTT
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcC---------CCCCEEEEccchhh
Confidence 7 5789999999999999999999999999999999999999877665555655551 34689999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---C
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---G 348 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---g 348 (469)
|| +|+|+||++++++ +.+.+..... .++++.+.|.++.++|++..+ .+++++.++.++++++++.+.|++. |
T Consensus 291 ~~-~GlriG~v~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~g 367 (448)
T 3aow_A 291 LA-PGFRIGWMVGDPG-IIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL-EKHIPEIRKFYKPRRDAMLEALEEFMPEG 367 (448)
T ss_dssp TC-GGGCCEEEEECHH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred cc-ccccEEEEEeCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99 9999999999644 4444433322 234688999999999987655 7788999999999999999999985 7
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
+++..+.+|+|+|++++... +..+++..++++ ||.+.||..|+.. .++++||+++..+++++++++++|++
T Consensus 368 ~~~~~p~~g~~~~v~~~~~~------~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~ 440 (448)
T 3aow_A 368 VKWTKPEGGMFIWVTLPDGI------DSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAE 440 (448)
T ss_dssp CEECCCSBSSEEEEECSTTC------CHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHH
T ss_pred eEEeCCCccEEEEEEcCCCC------CHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 88888888999999997532 234677777765 9999999988753 46799999986689999999999999
Q ss_pred HHHhhcc
Q 043923 427 FVDSITT 433 (469)
Q Consensus 427 ~l~~~~~ 433 (469)
++++..+
T Consensus 441 ~l~~~~~ 447 (448)
T 3aow_A 441 TIKEELK 447 (448)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987644
No 9
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.3e-46 Score=377.49 Aligned_cols=361 Identities=19% Similarity=0.288 Sum_probs=288.8
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i 114 (469)
..++|||+.|.++++ ++.+.+++.+.... .....|++..|..+|++++|+++.+.++ +++++ ++|
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~~~~~~g--~~~~~~~~v 102 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQR-----------EDTHGYSTSRGIPRLRRAISHWYRDRYD--VQIDPESEA 102 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC--------------------CTTCCHHHHHHHHHHHHHHHC--CCCCTTTSE
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCcCE
Confidence 346899999998874 56777777664221 1245688778999999999999987766 33567 799
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|.+.+++|.+|++++++++++ ++++
T Consensus 103 ~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~ 175 (412)
T 2x5d_A 103 IVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIA-GAQVRSVPLVPGIDFFNELERAIRESIP------KPRM 175 (412)
T ss_dssp EEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHH-TCEEEEEECSTTSCHHHHHHHHHHTEES------CCSE
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHhccc------CceE
Confidence 99999999999999999999999999999999999988887 9999999988654677888888887653 7889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++..+.++..+.. ..+++++++|+||+|
T Consensus 176 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s~sK~~ 247 (412)
T 2x5d_A 176 MILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPG--------AKDIAVEFFTLSKSY 247 (412)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------GGGTEEEEEECC-CC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccC--------ccCcEEEEecCcccc
Confidence 999999999999999999999999999999999999999987775544455554421 246899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|++|+|+||+++++ .+.+.+..... .++++++.|.++.++|... .+++++.++.++++++++.+.|+++|+++.
T Consensus 248 ~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 323 (412)
T 2x5d_A 248 NMAGWRIGFMVGNP-ELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREAGWMVE 323 (412)
T ss_dssp SCTTSCCEEEEECH-HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCcccceEEEEcCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCEec
Confidence 99999999999954 44444443332 2457889999998888764 245788888999999999999998899888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
++.+|+|+|++++..... .+..+++..+++++||.+.||..|+...++++||+++. +++++++++++|++++++..
T Consensus 324 ~~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 324 NPKASMYVWAKIPEPYAH---LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp CCSBSSEEEEECCTTTGG---GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred CCCeeeEEEEEcCCccCC---CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence 888899999999743210 12346777877777999999998875557899999996 99999999999999998754
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 400 ~ 400 (412)
T 2x5d_A 400 L 400 (412)
T ss_dssp C
T ss_pred C
Confidence 4
No 10
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-46 Score=376.15 Aligned_cols=353 Identities=20% Similarity=0.313 Sum_probs=289.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~ 115 (469)
.++|||+.|.++++ ++.+.+++.+.... .....|++..|..+|++++|+++.+.++ +++++ ++|+
T Consensus 47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~v~ 113 (404)
T 2o1b_A 47 LPLINMAVGIPDGPTPQGIIDHFQKALTI-----------PENQKYGAFHGKEAFKQAIVDFYQRQYN--VTLDKEDEVC 113 (404)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTC-----------HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCEEecCCcCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 45899999999875 46677776653211 1245788878899999999999987766 33555 7999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|.+. ++|.+|++++++++++ ++++|
T Consensus 114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 185 (404)
T 2o1b_A 114 ILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLA-DGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLI 185 (404)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHT-TCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEE
Confidence 9999999999999999999999999999999999988877 99999999875 5678899999998865 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++ ...++..+.. ..+++++++|+||+||
T Consensus 186 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~--------~~~~~i~~~s~sK~~g 256 (404)
T 2o1b_A 186 YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASEN--------GKDVAIEIYSLSKGYN 256 (404)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTT--------HHHHEEEEEESTTTTT
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCC--------CCCCEEEEEecchhcc
Confidence 999999999999999999999999999999999999999876654 2344444421 2367899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||++++++ +.+.+..... .++++.+.|.++.++|+.. .+++++.+++++++++++.+.|+++|+++.+
T Consensus 257 ~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 332 (404)
T 2o1b_A 257 MSGFRVGFAVGNKD-MIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKADLPFVH 332 (404)
T ss_dssp CGGGCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEC
T ss_pred CchhheEeEecCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCeecC
Confidence 99999999999544 4444443322 2357889999988888763 4568888999999999999999998999888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+|+|+|++++... +..++++.+++++||.+.||..|+...++++||+++. +++++++++++|++++++.
T Consensus 333 ~~~g~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 333 AKGGIYVWLETPPGY------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp CCBSSEEEEECCTTC------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGGG
T ss_pred CCcceEEEEeCCCCC------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhh
Confidence 889999999997421 2335777877677999999998875457899999996 8899999999999988754
No 11
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.1e-45 Score=371.29 Aligned_cols=358 Identities=18% Similarity=0.376 Sum_probs=292.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc-EE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK-IV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~-i~ 115 (469)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..+|++++|+++.+.++ +.+++++ |+
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~ 91 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALD------------KGLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIM 91 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHh------------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 47899999998864 4566666655311 1134688878899999999999987766 3357889 99
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|+++.|+|+++...+... |++++.+|.+.+++|.+|++++++++++ ++++|
T Consensus 92 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v 164 (389)
T 1gd9_A 92 VLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILA-GGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRAL 164 (389)
T ss_dssp EESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHH-TCEEEEEECCGGGTTCCCHHHHHHHCCT------TEEEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCCccCCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999988887 9999999987545688999999998864 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..+.. ..+++++++|+||+||
T Consensus 165 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s~sK~~~ 236 (389)
T 1gd9_A 165 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDG--------MFERTITVNGFSKTFA 236 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT--------CGGGEEEEEESTTTTT
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccC--------CCCCEEEEecChhhcC
Confidence 99999999999999999999999999999999999999987766543345544421 2468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||+++++ .+.+.+..... .++++++.|.++.++|+.... .+++++.+++++++++++.+.|+++|+++.+
T Consensus 237 ~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 314 (389)
T 1gd9_A 237 MTGWRLGFVAAPS-WIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEMGLPTVK 314 (389)
T ss_dssp CGGGCCEEEECCH-HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CcccceEEEEECH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCeecC
Confidence 9999999999964 44444443332 245788999999999987432 3368888999999999999999998998888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+.+|+|+|++++... .+..++++.+++++||.+.||..|+..+++++||+++. +++++++++++|++++++.+
T Consensus 315 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 315 PKGAFYIFPRIRDTG-----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp CCBTTEECCBCGGGT-----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred CCeeeEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcc
Confidence 888999999987410 12335777777678999999998875557899999996 99999999999999997654
No 12
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=6.1e-46 Score=373.58 Aligned_cols=357 Identities=21% Similarity=0.360 Sum_probs=282.1
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+.|+++++ ++.+.+++.+... .....|++..|..+||+++|+++++.++ +++++++|+
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~v~ 95 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLE------------TDALGYTVALGLPALRQRIARLYGEWYG--VDLDPGRVV 95 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC----------------------CCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999999986 4556666665311 1235788888899999999999998877 446889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||+|+++.|+|..+...+... |++++.+|++.+++|.+|+++++++ ++++|
T Consensus 96 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v 165 (391)
T 3h14_A 96 ITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRAL-GLVPVDLPTAPENRLQPVPADFAGL---------DLAGL 165 (391)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECCGGGTTSCCHHHHTTS---------CCSEE
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHhc---------CCeEE
Confidence 9999999999999999999999999999999999888887 9999999998777788999888764 67899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.. .+...+ .+++++++|+||.+|
T Consensus 166 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~-----------~~~~i~~~s~sK~~g 233 (391)
T 3h14_A 166 MVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA-VTALEL-----------TDECYVINSFSKYFS 233 (391)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGGT-----------CSSSEEEEESSSTTC
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC-cChhhc-----------CCCEEEEEechhccC
Confidence 99999999999999999999999999999999999999987776542 333322 368899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce-e
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC-L 352 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v-~ 352 (469)
++|+|+||++++++.+ +.+..... .++++.+.|.++.+++.. .+++++.+++++++++.+.+.|+++++.. .
T Consensus 234 ~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 308 (391)
T 3h14_A 234 MTGWRVGWMVVPEDQV-RVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAGFTRIA 308 (391)
T ss_dssp CTTSCCEEEECCGGGH-HHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHTCCCBC
T ss_pred CccceeEEEEeCHHHH-HHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 9999999999966544 33333322 234778899888888873 45688889999999999999999987654 5
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
++.+++|+|++++... .+..+++..+++++||.+.||+.|+. ..++++|++++. +++++++++++|++++++.
T Consensus 309 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 309 PPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp CCCBTTEEEEECTTTC-----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC
T ss_pred CCCeeEEEEEecCccC-----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7788899999987421 12346778888777999999999986 457899999996 8999999999999999977
Q ss_pred cccccccccc
Q 043923 432 TTTLHNQSNH 441 (469)
Q Consensus 432 ~~~~~~~~~~ 441 (469)
.++. ..|||
T Consensus 383 ~~~~-~~~~~ 391 (391)
T 3h14_A 383 GEGH-HHHHH 391 (391)
T ss_dssp ----------
T ss_pred cccc-cccCC
Confidence 7743 34444
No 13
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=4.2e-46 Score=378.46 Aligned_cols=363 Identities=18% Similarity=0.338 Sum_probs=295.9
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~ 115 (469)
.++|+|+.|.+.++ ++.+.+++.+.... ......|++..|..++|+++++++++.++ +++++ ++|+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~~i~ 95 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSG----------DFMLNQYTKTFGYPPLTKILASFFGELLG--QEIDPLRNVL 95 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHS----------CGGGGSCCCTTCCHHHHHHHHHHHHHHHT--CCCCHHHHEE
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhC----------CCccCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCcEE
Confidence 37899999998875 56677766653110 01246799888999999999999998877 34567 7999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC----------CCCcccCHHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS----------LNGFQITETAIEEAYQLA 185 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~d~~~l~~~i~~~ 185 (469)
+|+|+++++..++.+++++||.|+++.|+|..+...+... |.+++.+|++. ..+|.+|++++++++++
T Consensus 96 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~- 173 (422)
T 3fvs_A 96 VTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMA-GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS- 173 (422)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-
T ss_pred EECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHc-CCEEEEEecccccccccccccccCCCCCHHHHHhhcCC-
Confidence 9999999999999999999999999999999999888887 99999999875 23678999999988764
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. ..++++
T Consensus 174 -----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i 240 (422)
T 3fvs_A 174 -----RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG--------MWERTL 240 (422)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------TGGGEE
T ss_pred -----CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhccc--------ccCcEE
Confidence 7899999999999999999999999999999999999999999998777765556655532 347899
Q ss_pred EEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcC-----chhhHHHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFTQNYISENKKRLKQRHR 338 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~l~~~~~ 338 (469)
+++|+||+||++|+|+||++++++.+ +.+.... ..++++++.|.++.+++.+ ..+ .+++++.+++++++++
T Consensus 241 ~~~S~sK~~g~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~ 318 (422)
T 3fvs_A 241 TIGSAGKTFSATGWKVGWVLGPDHIM-KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP-SSYFVQFPQAMQRCRD 318 (422)
T ss_dssp EEEEHHHHHTCGGGCCEEEECCHHHH-HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT-TCHHHHHHHHHHHHHH
T ss_pred EEecchhccCCccceEEEEEeCHHHH-HHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999965544 4343332 2345788999998888864 122 4567888999999999
Q ss_pred HHHHHHHhcCCceecCCceEEEEEecccccccC-------ChhHHHHHHHHHHHhCCeEEeCCCCCCC-----CCCCeEE
Q 043923 339 KLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSN-------TFEAEMELWKKIVYDVKLNISPGSSCHC-----TEPGWFR 406 (469)
Q Consensus 339 ~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~-------~~~~~~~l~~~ll~~~GI~v~pg~~f~~-----~~~~~iR 406 (469)
++.+.|+++|+++..+.+|+|+|++++...... ......+++..+++++||.+.||+.|+. .+.+++|
T Consensus 319 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iR 398 (422)
T 3fvs_A 319 HMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIR 398 (422)
T ss_dssp HHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEE
Confidence 999999999999888999999999987521100 0011346788888888999999998864 3578999
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHh
Q 043923 407 VCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 407 i~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++++. +++++++++++|++++++
T Consensus 399 is~~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 399 FCFVK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EECCC-CHHHHHHHHHHHHHHHHC
T ss_pred EEecC-CHHHHHHHHHHHHHHHhh
Confidence 99996 999999999999999864
No 14
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.1e-45 Score=376.45 Aligned_cols=360 Identities=18% Similarity=0.305 Sum_probs=294.2
Q ss_pred CCeeeeeccccc-----cChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 38 TGIIQMGLAENQ-----LSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 38 ~~~i~L~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
.++|+|+.|.+. .+++.+.+++.+.... .....|++..|+.+||+++|+++++. + .+++++
T Consensus 54 ~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~~~ 119 (427)
T 3dyd_A 54 KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDS-----------GKYNGYAPSIGFLSSREEIASYYHCP-E--APLEAK 119 (427)
T ss_dssp SCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHH-----------CCSSSCCCTTCCHHHHHHHHHHHCBT-T--BCCCGG
T ss_pred CCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhc-----------CcCCCCCCCCCcHHHHHHHHHHHhhc-C--CCCChH
Confidence 468999999753 2456677776653110 12457988889999999999999754 3 446789
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|++|+|+++|+..++.+++++||+|+++.|+|..+...+... |++++.+|++++++|.+|++.+++++++ ++
T Consensus 120 ~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~ 192 (427)
T 3dyd_A 120 DVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESM-GIEVKLYNLLPEKSWEIDLKQLEYLIDE------KT 192 (427)
T ss_dssp GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHSSCCT------TE
T ss_pred HEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhcc------CC
Confidence 9999999999999999999999999999999999999888887 9999999997767888999999988764 78
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..+. ...++++++|+||
T Consensus 193 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~---------~~~~vi~~~S~sK 263 (427)
T 3dyd_A 193 ACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLS---------TDVPILSCGGLAK 263 (427)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGC---------SSCCEEEEEESTT
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhC---------CCCcEEEEeeccc
Confidence 9999999999999999999999999999999999999999999877766555555542 2356899999999
Q ss_pred ccCCCcceEEEEEecC------HHHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 273 DLGLPGFRVGAIYSND------DMVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~------~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
.|+++|+|+||+++++ +.+.+.+.... ..++++++.|.++.++|.+.. .+++++.+++++++++.+.+.|+
T Consensus 264 ~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~~L~ 341 (427)
T 3dyd_A 264 RWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYGALA 341 (427)
T ss_dssp TSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999875 34554444332 345588899999999987432 45678888999999999999999
Q ss_pred hc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 346 KA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 346 ~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
++ |+++..+.+|+|+|+.++...... ..+..+++.++++++||.+.||..|+. ++++||+++ .+++++++++++|
T Consensus 342 ~~~g~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l~~l 417 (427)
T 3dyd_A 342 AIPGLRPVRPSGAMYLMVGIEMEHFPE-FENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVIT-VPEVMMLEACSRI 417 (427)
T ss_dssp HSTTEEEECCSBTTEEEEEECGGGCTT-CSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESC-SCHHHHHHHHHHH
T ss_pred cCCCceecCCCeeEEEEEecCHhhcCC-CCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEEC-CCHHHHHHHHHHH
Confidence 98 888888889999999887321110 122346788888788999999998864 689999998 5999999999999
Q ss_pred HHHHHhhcc
Q 043923 425 KAFVDSITT 433 (469)
Q Consensus 425 ~~~l~~~~~ 433 (469)
++++++.++
T Consensus 418 ~~~l~~~~~ 426 (427)
T 3dyd_A 418 QEFCEQHYH 426 (427)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999987653
No 15
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=7.8e-46 Score=374.96 Aligned_cols=358 Identities=20% Similarity=0.336 Sum_probs=292.3
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~ 115 (469)
.++|+|+.|.+.++ ++.+.+++.+.... .....|++..|..+|++++|+++++.++ +.+++ ++|+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~la~~~~~~~~--~~~~~~~~i~ 89 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFI-----------DNMNQYTRGFGHPALVKALSCLYGKIYQ--RQIDPNEEIL 89 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTC-----------GGGGSCCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------ccccCCCCCCChHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 47899999998875 56677776653111 1356799888899999999999998877 44667 8999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC---------CCCcccCHHHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS---------LNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~---------~~~~~~d~~~l~~~i~~~~ 186 (469)
+|+|+++++..++.+++++||.|+++.|+|..+...+... |.+++.++++. ..+|.+|++++++++++
T Consensus 90 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-- 166 (410)
T 3e2y_A 90 VAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMA-GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-- 166 (410)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT--
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEeccccccccccccccCCcCCHHHHHhhcCC--
Confidence 9999999999999999999999999999999999988887 99999999862 24677899999988754
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. ..+++++
T Consensus 167 ----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 234 (410)
T 3e2y_A 167 ----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG--------MWERTIT 234 (410)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT--------CGGGEEE
T ss_pred ----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCC--------ccCeEEE
Confidence 7999999999999999999999999999999999999999999988777665556655532 4478999
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcC-----chhhHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFTQNYISENKKRLKQRHRK 339 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~l~~~~~~ 339 (469)
++|+||+||++|+|+||++++++.+ +.+.... ..++++++.|.++.++|.+ ..+ .+++++.++.+++++++
T Consensus 235 ~~S~sK~~g~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 312 (410)
T 3e2y_A 235 IGSAGKTFSVTGWKLGWSIGPAHLI-KHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP-ECYFNSLPKELEVKRDR 312 (410)
T ss_dssp EEEHHHHSSCGGGCCEEEECCHHHH-HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHH
T ss_pred EecchhhcCCCCceEEEEEECHHHH-HHHHHHHHhhccCCChHHHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999965544 4343332 2345788999998888863 112 45578889999999999
Q ss_pred HHHHHHhcCCceecCCceEEEEEecccccccC-----ChhHHHHHHHHHHHhCCeEEeCCCCCCCC-----CCCeEEEEe
Q 043923 340 LVSGLEKAGISCLKSNAGLFCWVDMRHLLRSN-----TFEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVCF 409 (469)
Q Consensus 340 l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~-----~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-----~~~~iRi~~ 409 (469)
+.+.|+++|+++..+.+|+|+|++++...... ....+.+++..+++++||.+.||+.|+.. +.+++||++
T Consensus 313 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~ 392 (410)
T 3e2y_A 313 MVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF 392 (410)
T ss_dssp HHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEEC
T ss_pred HHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEE
Confidence 99999999999999999999999987532211 01123467788888889999999988653 358999999
Q ss_pred ecCCHHHHHHHHHHHHH
Q 043923 410 ANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~ 426 (469)
+. +++++++++++|++
T Consensus 393 ~~-~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 393 IK-KDSTLDAAEEIFRA 408 (410)
T ss_dssp CC-CHHHHHHHHHHHHT
T ss_pred cC-CHHHHHHHHHHHHh
Confidence 85 99999999999975
No 16
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=379.97 Aligned_cols=350 Identities=19% Similarity=0.279 Sum_probs=276.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC----EEEEccCCCcChHHHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGE----AFLLPTPYYPGFDRDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd----~Vl~~~P~y~~~~~~~~~ 154 (469)
...|++..|.++||+++|+++.++++ ++++++++|++|+|+++++..++.+++++|| .|+++.|+|+.|...+..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~g-G~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDG-GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTT-TCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcC-CCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 45799999999999999999988763 2456899999999999999999999999875 999999999999999888
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++++++++|.+|+++|++++++... ..++++|+++||+||||.++|.+++++|+++|++||++||+||+|.
T Consensus 201 ~-g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~ 278 (498)
T 3ihj_A 201 L-DAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ 278 (498)
T ss_dssp T-TCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred c-CCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc
Confidence 7 9999999999888899999999999986321 1258999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEe--cCHHHHHHHHHhc-ccccCcHHHH
Q 043923 235 GTVFSSP-GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMS-SFGLVSSQTQ 309 (469)
Q Consensus 235 ~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~--~~~~~~~~~~~~~-~~~~~s~~~q 309 (469)
++.|++. .+.++..+..+++.. .+...++++++||||+| |++|+|+||++. .++.+.+.+.+.. ...+++.+.|
T Consensus 279 ~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q 357 (498)
T 3ihj_A 279 DNVYSPDCRFHSFKKVLYEMGPE-YSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQ 357 (498)
T ss_dssp TCBCCTTCCCCCHHHHHHHTCHH-HHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHH
T ss_pred ccccCCCCCcCCHHHHHHHhccc-ccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHH
Confidence 9888754 566776664421000 00113588999999999 899999999984 3555555554433 3445788999
Q ss_pred HHHHHHhcC-----chh--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccc------cCChhH
Q 043923 310 YLLSALLSD-----KKF--TQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLR------SNTFEA 375 (469)
Q Consensus 310 ~~~~~~l~~-----~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~------~~~~~~ 375 (469)
.++..++.. +.+ ..++.+..++.++++++++.+.|+++ |+++.++++|+|+|++++.... ......
T Consensus 358 ~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~ 437 (498)
T 3ihj_A 358 AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAP 437 (498)
T ss_dssp HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCH
T ss_pred HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCc
Confidence 999999875 122 12334667788999999999999998 8999999999999987642110 001122
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+..++.++++++||.+.||+.|+. .+.+++|++++ .+++++++++++|+++++++.+
T Consensus 438 ~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 438 DMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp HHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 323367788888999999999985 45679999997 6999999999999999988776
No 17
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2e-45 Score=374.28 Aligned_cols=329 Identities=17% Similarity=0.275 Sum_probs=266.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFD-------TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD 151 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~-------~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~ 151 (469)
...|++..|+++||+++++++.+.++. ..+ +++|++|+|+++++..++.+++++||.|+++.|+|..+...
T Consensus 71 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 71 ALQYSPSAGIPELLSWLKQLQIKLHNP--PTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp HTSCCCTTCCHHHHHHHHHHHHHHHCC--TTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCC--CCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence 457999999999999999999888773 232 37999999999999999999999999999999999999998
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH------hcCCceeEEEE-ecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ------KRHLKVKGVLV-TNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~~~~~~~vvl-~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
+... |++++.+|++.+ .+|++++++++++.. ...+++++|++ ++||||||.++|.+++++|+++|++||
T Consensus 149 ~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~ 224 (425)
T 2r2n_A 149 LHPL-GCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224 (425)
T ss_dssp HGGG-TCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHc-CCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcC
Confidence 8887 999999998742 379999999886210 00125788765 689999999999999999999999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccc
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFG 302 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~ 302 (469)
++||+||+|+++.|++....++..+. ..+++++++||||+|| +|+|+||+++++. +.+.+.... ..+
T Consensus 225 ~~li~De~~~~~~~~g~~~~~~~~~~---------~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~~~~ 293 (425)
T 2r2n_A 225 FLIIEDDPYYFLQFNKFRVPTFLSMD---------VDGRVIRADSFSKIIS-SGLRIGFLTGPKP-LIERVILHIQVSTL 293 (425)
T ss_dssp CEEEEECTTGGGBSSSSCCCCTGGGC---------TTSCEEEEEESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHTTTC
T ss_pred CEEEEECCcccccCCCCCCCCccccC---------CCCCEEEEccchhhcc-CccceEEEecCHH-HHHHHHHHHHHhcC
Confidence 99999999998878765555665551 3468999999999998 9999999999655 444443332 224
Q ss_pred cCcHHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHhc--CC-ceecCCceEEEEEecccccccCChhHH
Q 043923 303 LVSSQTQYLLSALLSD---KKFTQNYISENKKRLKQRHRKLVSGLEKA--GI-SCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~-~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
+++.+.|.++.++|++ +.+ .+++++.++.++++++.+.+.|++. ++ .+..+.+|+|+|++++...+.
T Consensus 294 ~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~------ 366 (425)
T 2r2n_A 294 HPSTFNQLMISQLLHEWGEEGF-MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV------ 366 (425)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCC------
T ss_pred CCCHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCH------
Confidence 5788999999999876 333 6778889999999999999999985 66 466788999999999753221
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCT---EPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~---~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+++.+.+.++||.+.||..|+.. ..+++||+++..+++++++++++|++++++.
T Consensus 367 ~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 367 KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 233344556789999999998753 3579999998559999999999999998753
No 18
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=5e-45 Score=371.56 Aligned_cols=364 Identities=19% Similarity=0.288 Sum_probs=291.4
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~ 115 (469)
.++|+|+.+.+.++ ++.+.+++.+..... ......|++..|..+|++++|+++.+.++ ++++++ +|+
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~ 105 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSP---------DPLANQYTRGFGHPRLVQALSKLYSQLVD--RTINPMTEVL 105 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCS---------CGGGGSCCCSSCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcc---------ccCccCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcCCEE
Confidence 46899999988764 466666666531110 01345788888899999999999988766 345788 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCC--------CcccCHHHHHHHHHHHHh
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLN--------GFQITETAIEEAYQLAQK 187 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~ 187 (469)
+|+|+++|+..++.+++++||.|+++.|+|..+...+... |.+++.+|++.+. +|.+|++++++++++
T Consensus 106 ~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 181 (429)
T 1yiz_A 106 VTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA-GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE--- 181 (429)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---
Confidence 9999999999999999999999999999999999888877 9999999987543 578999999988753
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++..+.++..+.. ..++++++
T Consensus 182 ---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~~~~ 250 (429)
T 1yiz_A 182 ---KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG--------MWERTITI 250 (429)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTT--------TGGGEEEE
T ss_pred ---CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccC--------CcCceEEE
Confidence 7899999999999999999999999999999999999999999988776654445544411 34689999
Q ss_pred ccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcC-----chhhHHHHHHHHHHHHHHHHHH
Q 043923 268 YSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSD-----KKFTQNYISENKKRLKQRHRKL 340 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~l~~~~~~l 340 (469)
.|+||.||++|+|+||+++++. +.+.+.... ..++.+++.|.++.++|+. ..+ .+++++.++.++++++.+
T Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 328 (429)
T 1yiz_A 251 GSAGKTFSLTGWKIGWAYGPEA-LLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKRDYM 328 (429)
T ss_dssp EEHHHHHTCGGGCCEEEESCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHHHHH
T ss_pred ecchhccCCCCcceEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999654 444443332 2345788889888888876 433 456788899999999999
Q ss_pred HHHHHhcCCceecCCceEEEEEecccccc------cCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-----CCCeEEEEe
Q 043923 341 VSGLEKAGISCLKSNAGLFCWVDMRHLLR------SNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----EPGWFRVCF 409 (469)
Q Consensus 341 ~~~L~~~g~~v~~~~~g~~~~v~~~~~~~------~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-----~~~~iRi~~ 409 (469)
.+.|+++|+++..+.+|+|+|++++.... .....+..+++.++++++||.+.||..|+.. .++++||++
T Consensus 329 ~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~ 408 (429)
T 1yiz_A 329 ASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCF 408 (429)
T ss_dssp HHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEEC
T ss_pred HHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEe
Confidence 99999889998888889999999975310 0000234467777877789999999888642 267999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHh
Q 043923 410 ANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+. +++++++++++|++++++
T Consensus 409 ~~-~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 409 FK-KDENLQKAAEILRKWKGS 428 (429)
T ss_dssp CS-CHHHHHHHHHHHHHHSCC
T ss_pred cC-CHHHHHHHHHHHHHhccC
Confidence 95 999999999999988653
No 19
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.8e-45 Score=364.88 Aligned_cols=349 Identities=19% Similarity=0.249 Sum_probs=291.7
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+.|+++++ ++.+.+++.+... .....|++ .+ .++|+++|+++++.++ +.+++++|+
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~-~~-~~lr~~la~~~~~~~~--~~~~~~~i~ 85 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQ------------REAFGYQP-DG-SLLSQATAEFYADRYG--YQARPEWIF 85 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHH------------TTCCSSCC-SS-CCHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHH------------cCCCCCCC-CC-HHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999999885 4667776665311 12457888 77 9999999999998877 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||+|+++.|+|..+...+... |.+++.+|++.+ +|++++++++++ +++++
T Consensus 86 ~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~----~d~~~l~~~l~~------~~~~v 154 (377)
T 3fdb_A 86 PIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSAT-QREGIFIDATGG----INLHDVEKGFQA------GARSI 154 (377)
T ss_dssp EESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHH-TCCEEEEECTTS----CCHHHHHHHHHT------TCCEE
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEEccCCCC----CCHHHHHHHhcc------CCCEE
Confidence 9999999999999999999999999999999999988888 999999998753 899999999875 68899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC-CCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++ ....++..+. ..+++++++|+||++
T Consensus 155 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~---------~~~~~i~~~s~sK~~ 225 (377)
T 3fdb_A 155 LLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDT---------AASVCITITAPSKAW 225 (377)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHH---------HHHHEEEEECSTTTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHcc---------CCCcEEEEEeChHhc
Confidence 999999999999999999999999999999999999999987766 4444444432 236889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCc
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GIS 350 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~ 350 (469)
|++|+|+||++++++.+.+.+...... ++++++.+.++.+++.+. .+++++.++.++++++++.+.|+++ +++
T Consensus 226 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 302 (377)
T 3fdb_A 226 NIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK 302 (377)
T ss_dssp TCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred cCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 999999999998666666666554432 457889999888888753 4567888999999999999999985 899
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+.++.+++++|++++...... +++..+++++||.+.||..|+...++++|++++. +++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 303 ITPMQATYLMWIDFRDTTIEG------SPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp ECCCSBCSEEEEECTTSCCCS------CHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTT
T ss_pred EecCCeeEEEEEECcccCCCH------HHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 999999999999998631111 3677788778999999999987667899999995 999999999999999875
Q ss_pred h
Q 043923 431 I 431 (469)
Q Consensus 431 ~ 431 (469)
.
T Consensus 376 ~ 376 (377)
T 3fdb_A 376 H 376 (377)
T ss_dssp C
T ss_pred c
Confidence 3
No 20
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-45 Score=365.55 Aligned_cols=348 Identities=17% Similarity=0.257 Sum_probs=283.2
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i 114 (469)
..++|||+.|+++++ ++.+.+++.+.... .....|++..|..+|++++|+++.+.++ ++++++ +|
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~l~~~ia~~~~~~~g--~~~~~~~~v 90 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALND-----------PTTYGYCLKSCTLPFLEEAARWYEGRYG--VGLDPRREA 90 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTC-----------GGGSSCCCHHHHHHHHHHHHHHHHHHHS--CCCCTTTSE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccE
Confidence 346899999999874 46677777653211 1245788766889999999999987766 334566 99
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|+ +++|.+|++++++++++ ++++
T Consensus 91 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~--~~~~~~d~~~l~~~l~~------~~~~ 161 (376)
T 2dou_A 91 LALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVA-SLRTFLIPL--REDGLADLKAVPEGVWR------EAKV 161 (376)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHT-TCEEEEECB--CTTSSBCGGGSCHHHHH------HEEE
T ss_pred EEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHc-CCEEEEeeC--CCCCCCCHHHHHHhhcc------CceE
Confidence 99999999999999999999999999999999999888877 999999998 35778899999998865 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++. ..++..+.. ..+++++++|+||+|
T Consensus 162 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--------~~~~~i~~~s~sK~~ 232 (376)
T 2dou_A 162 LLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE-APSPLALPG--------AKERVVELFSLSKSY 232 (376)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC-CCCGGGSTT--------GGGTEEEEEEHHHHH
T ss_pred EEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCC--------CCCcEEEEecchhhc
Confidence 99999999999999999999999999999999999999998766542 234444322 346789999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|++|+|+||+++++ .+.+.+...... .+.+.+.|.++.++|++. .+++++.++.++++++.+.+.|+++ +++.
T Consensus 233 ~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 307 (376)
T 2dou_A 233 NLAGFRLGFALGSE-EALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV-LSLL 307 (376)
T ss_dssp TCGGGCCEEEEECH-HHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT-SEEC
T ss_pred CChhheeEEEecCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 99999999999854 444444433222 246888999999999773 4568888999999999999999988 8888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
++.+|+|+|++++... +..++++.++++ ||.+.||..|+...++++||+++. +++++++++++|++++
T Consensus 308 ~~~~~~~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 308 PPRATMYLWGRLPEGV------DDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp CCCBSSEEEEECCTTC------CHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred CCCeeEEEEEECCCCC------CHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 8888999999997422 123577777765 999999998875457899999985 8999999999998865
No 21
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.4e-45 Score=363.13 Aligned_cols=345 Identities=16% Similarity=0.212 Sum_probs=280.9
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
++|||+.|+|+++ ++.+.+++.+. ......|++..|..+||+++|+++.+.++ +++++++|++|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~t 88 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNH-------------THSLNIYPKSAFEESLRAAQRGFFKRRFK--IELKENELIST 88 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTT-------------GGGGGSCCCTTCCHHHHHHHHHHHHHHHS--CCCCGGGEEEE
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHh-------------hhhcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEEC
Confidence 8899999999985 56778887764 13456899888999999999999988876 34578999999
Q ss_pred CChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 118 AGATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+++++..++.+++++ ||+|+++.|+|..+...+... |.+++.+|++.++++.+ ++++++.+ ++++|
T Consensus 89 ~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~---~l~~~~~~------~~~~v 158 (376)
T 3ezs_A 89 LGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFI-KAKSLLMPLTKENDFTP---SLNEKELQ------EVDLV 158 (376)
T ss_dssp SSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTSCC---CCCHHHHH------HCSEE
T ss_pred cCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHc-CCEEEEcccCCCCCcch---hHHhhhcc------CCCEE
Confidence 99999999999999999 999999999999999988887 99999999886555544 55666654 78899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++. ..+.......+ +.+..+++++++|+||++|
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~i~~~s~sK~~g 234 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLA---GNEAFKNVLVIHSLSKRSS 234 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHT---TCTTCTTEEEEEESTTTTT
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccc---cccccCcEEEEecchhccC
Confidence 9999999999999999999999999999999999999998777653 34544432100 0002478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||+++++ .+.+.+..... .++++++.|.++.+++.+.++ +++.+++++++++.+.+.|+ ++. .
T Consensus 235 ~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~--~~~--~ 305 (376)
T 3ezs_A 235 APGLRSGFIAGDS-RLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRH----AEFFRNIYANNLKLARKIFK--NTL--I 305 (376)
T ss_dssp CGGGCCEEEEECH-HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHH----HHHHHHHHHHHHHHHHHHST--TCC--C
T ss_pred CccceeEEEeeCH-HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHH----HHHHHHHHHHHHHHHHHHhc--CCC--C
Confidence 9999999999954 45454444432 234788999999999887543 67888899999999999887 655 6
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC--CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH--CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~--~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+|+|+|++++. ..+++..+++++||.+.||..|+ ...++++||+++. +++++++++++|++++++.
T Consensus 306 ~~~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 306 YPYSFYVYLPVQN---------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp CSBSSEEEEECSC---------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC-
T ss_pred CCcceEEEEECCC---------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhc
Confidence 6788999999871 23577777765799999999998 4457899999985 9999999999999998653
No 22
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1e-44 Score=364.13 Aligned_cols=357 Identities=19% Similarity=0.243 Sum_probs=294.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.+.+.++ ++.+.+++.+... .....|++. ..++++++++++.+.++ +++++++|++
T Consensus 27 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~i~~ 90 (391)
T 3dzz_A 27 EKELPMWIAEMDFKIAPEIMASMEEKLK------------VAAFGYESV--PAEYYKAVADWEEIEHR--ARPKEDWCVF 90 (391)
T ss_dssp TTCEECCSSCCSSCCCHHHHHHHHHHHT------------TCCCCCBCC--CHHHHHHHHHHHHHHHS--CCCCGGGEEE
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHh------------cCcCCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 37999999988885 4667777765311 123467655 58999999999998877 3467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++||.|+++.|+|..+...+... |.+++.+|++ .++.|.+|++++++++++ +++++|
T Consensus 91 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~v 164 (391)
T 3dzz_A 91 ASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN-GRRVISSDLIYENSKYSVNWADLEEKLAT-----PSVRMM 164 (391)
T ss_dssp ESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHTS-----TTEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHc-CCEEEEeeeeecCCceeecHHHHHHHHhc-----cCceEE
Confidence 999999999999999999999999999999999988887 9999999986 456688999999999862 289999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+.+..+.++..+... ..++++++.|+||++|
T Consensus 165 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~d~~i~~~s~sK~~g 237 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWD-------AKNWVVSLISPSKTFN 237 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTT-------TGGGEEEEECSHHHHT
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCcc-------ccCcEEEEEeChhhcc
Confidence 999999999999999999999999999999999999999887776555565555321 2468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHh---cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCc
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKM---SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GIS 350 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~ 350 (469)
++|+|+||++++++.+.+.+... ...++.+++.+.++.+++... .+++++.+++++++++++.+.|++. |++
T Consensus 238 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 314 (391)
T 3dzz_A 238 LAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFAYAREFLAKEVPEVK 314 (391)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred ccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 99999999999756665555443 233457788888888877653 4567888999999999999999984 899
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+.++.+++++|++++... .+..+++..+++++||.+.||..|+..+++++||+++ .+++++++++++|++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 315 VLDSNASYLAWVDISALG-----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp ECCCCBSSEEEEECGGGC-----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHHHHHHHHT
T ss_pred EeccCceEEEEEehhhcC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence 999999999999987521 1234677777767799999999998767789999999 5999999999999999987
Q ss_pred hc
Q 043923 431 IT 432 (469)
Q Consensus 431 ~~ 432 (469)
.+
T Consensus 389 ~~ 390 (391)
T 3dzz_A 389 LN 390 (391)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 23
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=9.7e-45 Score=365.59 Aligned_cols=347 Identities=20% Similarity=0.395 Sum_probs=280.2
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|.+.++ ++.+.+++.+..... .......|++..|..+|++++++++++.++ +++++++|++
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~ 104 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDY--------DSVALHGYTSAQGDVETRAAIAEFLNNTHG--THFNADNLYM 104 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHS--------CHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcC--------CccccCCcCCCCCcHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 46899999977654 466666666531100 001156798888999999999999998877 4468899999
Q ss_pred eCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++| |.|+++.|+|..+...+... |++++.+|++. ++|.+|++++++++++ ++++|
T Consensus 105 ~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 176 (398)
T 3ele_A 105 TMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAA-GARLVEVPADT-EHFQIDFDALEERINA------HTRGV 176 (398)
T ss_dssp ESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCT-TTSSCCHHHHHHTCCT------TEEEE
T ss_pred ccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhCc------CCCEE
Confidence 9999999999999999999 99999999999999988887 99999999875 4688999999998864 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHh------cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITE------KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~------~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|+||||.+++.+++++|+++|++ ||++||+||+|+++.+++........ ..+++++++|
T Consensus 177 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-----------~~~~~i~~~s 245 (398)
T 3ele_A 177 IINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK-----------YYDNTLVCYS 245 (398)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG-----------TCSSEEEEEE
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh-----------hcCCeEEEEe
Confidence 999999999999999999999999999 99999999999998776543333221 3368999999
Q ss_pred CccccCCCcceEEEEEecCHH-----HHHHHHHh---cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDM-----VVAAATKM---SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLV 341 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~-----~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 341 (469)
+||+||++|+|+||+++++.. +...+... .....++.+.|.++..++.+... ++.++++++++.
T Consensus 246 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--------~~~~~~~~~~l~ 317 (398)
T 3ele_A 246 YSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGD--------INAYKENRDLLY 317 (398)
T ss_dssp STTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCC--------HHHHHHHHHHHH
T ss_pred hhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHHH--------HHHHHHHHHHHH
Confidence 999999999999999997652 22222221 12334677888888888876542 456677888899
Q ss_pred HHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 043923 342 SGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSM 421 (469)
Q Consensus 342 ~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l 421 (469)
+.|+++|+++.++.+|+|+|++++.. +..++++. +.++||.+.||..|+. ++++||+++ .+++++++++
T Consensus 318 ~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gi~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l 386 (398)
T 3ele_A 318 EGLTRIGYHCFKPDGAFYMFVKALED-------DSNAFCEK-AKEEDVLIVAADGFGC--PGWVRISYC-VDREMIKHSM 386 (398)
T ss_dssp HHHHHHTCCEECCSBSSEEEEECSSS-------CHHHHHHH-HHTTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHH
T ss_pred HHHHHcCCeecCCCeeEEEEEEcCCC-------CHHHHHHH-HHHCCEEEeCccccCC--CCeEEEEec-CCHHHHHHHH
Confidence 99988899999999999999998742 12345554 4678999999998874 679999998 5999999999
Q ss_pred HHHHHHHHhhc
Q 043923 422 QRLKAFVDSIT 432 (469)
Q Consensus 422 ~~L~~~l~~~~ 432 (469)
++|++++++.+
T Consensus 387 ~~l~~~l~~~~ 397 (398)
T 3ele_A 387 PAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999998765
No 24
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=6.2e-45 Score=367.12 Aligned_cols=359 Identities=16% Similarity=0.211 Sum_probs=289.7
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.+.++++ ++.+.+++.+... .....|++. ..+|++++|+++++.++ +++++++|+
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~ 93 (399)
T 1c7n_A 30 GNEVVPLSVADMEFKNPPELIEGLKKYLD------------ETVLGYTGP--TEEYKKTVKKWMKDRHQ--WDIQTDWII 93 (399)
T ss_dssp CTTCCCCCSSSCSSCCCHHHHHHHHHHHH------------HCCCSSBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCceeeeecCCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--cHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 457899999998775 5667776665310 123567764 79999999999988766 346788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++|+..++.+++++||.|+++.|+|.++...+... |++++.+|++ .+++|.+|++++++++++ +++++
T Consensus 94 ~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~ 167 (399)
T 1c7n_A 94 NTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ-ERKIIECELLEKDGYYTIDFQKLEKLSKD-----KNNKA 167 (399)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTT-TCEEEECCCEEETTEEECCHHHHHHHHTC-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEecccccCCCCEEEcHHHHHHHhcc-----CCCcE
Confidence 9999999999999999999999999999999999888877 9999999986 334578999999998862 27899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.+. ..++++++.|+||++
T Consensus 168 v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~~i~~~s~sK~~ 240 (399)
T 1c7n_A 168 LLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQ-------LADKTITFTAPSKTF 240 (399)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HHTTEEEEECSHHHH
T ss_pred EEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcc-------ccCcEEEEEeChhhc
Confidence 9999999999999999999999999999999999999999877765544455444210 136889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-CC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A-GI 349 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-g~ 349 (469)
|++|+|+||++++++.+.+.+...... .+++++.|.++.++|... .+++++.++.++++++++.+.|++ + ++
T Consensus 241 ~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 317 (399)
T 1c7n_A 241 NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQRIVKDFFEVNHPEI 317 (399)
T ss_dssp TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred cccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999766555544443322 246888998888888643 456788889999999999999998 5 88
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++.++.+++++|++++... .+..+++..+++++||.+.||..|+...++++||+++. .++++++++++|+++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 318 KAPLIEGTYLQWIDFRALK-----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALK 391 (399)
T ss_dssp BCCCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred eEecCCceEEEEEEcccCC-----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHH
Confidence 8888889999999997420 11335777776678999999998875557899999986 68999999999999998
Q ss_pred hhcc
Q 043923 430 SITT 433 (469)
Q Consensus 430 ~~~~ 433 (469)
+.++
T Consensus 392 ~~~~ 395 (399)
T 1c7n_A 392 DLKN 395 (399)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 7765
No 25
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=3.6e-45 Score=374.87 Aligned_cols=355 Identities=17% Similarity=0.216 Sum_probs=284.6
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|++.++ ++.+.+++.+..... ........|++..|..+|++++|+++. ++ +++++++|+
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-------~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g--~~~~~~~i~ 136 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGL-------ATREGYSGYGAEQGQGALREAVASTFY--GH--AGRAADEIF 136 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGG-------GGSCCCCCSTTTTCCHHHHHHHHHHHH--TT--TTCCGGGEE
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhh-------ccccCCCCCCCCCCcHHHHHHHHHHHH--cC--CCCCHHHEE
Confidence 346899999998885 456666665531100 000234578888899999999999997 33 447889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCE----------EEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVE----------IVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~----------~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+|+|+++++..+ .+++++||.|+++.|+|.++...+... |.+ ++.+|++.++++..|++++
T Consensus 137 ~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 207 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMM-GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------- 207 (449)
T ss_dssp EESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHH-TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-------
T ss_pred EccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHc-CCcccccccccceeEEEecccccCCcCChhHc-------
Confidence 999999999998 888899999999999999999998887 988 9999998766777765432
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
+++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....++..+.. ..++++
T Consensus 208 ----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~--------~~~~~i 275 (449)
T 3qgu_A 208 ----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPG--------ADEVAI 275 (449)
T ss_dssp ----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTT--------GGGTEE
T ss_pred ----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccC--------CCCcEE
Confidence 27899999999999999999999999999999999999999999998776654455554422 347889
Q ss_pred EEccCccccCCCcceEEEEEecCHHHH-------HHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSNDDMVV-------AAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQR 336 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~~~~~-------~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~ 336 (469)
++.|+||+||++|+|+||++++++.+. ..+... ..+..++++.|.++.+++.+.. .+++++.+++++++
T Consensus 276 ~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~ 353 (449)
T 3qgu_A 276 ETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFYKEN 353 (449)
T ss_dssp EEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHH
T ss_pred EEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHHHHH
Confidence 999999999999999999999765432 122222 2233578899999999987632 35678889999999
Q ss_pred HHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHH
Q 043923 337 HRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDT 416 (469)
Q Consensus 337 ~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~ 416 (469)
++++.+.|+++|+++.++.+|+|+|++++ .. +..+++..+++++||.+.||..|+..+++++||++.. ++++
T Consensus 354 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~ 425 (449)
T 3qgu_A 354 AQILKTTFTEMGFSVYGGDDAPYIWVGFP-GK------PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SREN 425 (449)
T ss_dssp HHHHHHHHHHTTCCEEESSSSSEEEEECT-TS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHH
T ss_pred HHHHHHHHHHCCCeeeCCCCeeEEEEECC-CC------CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHH
Confidence 99999999999999998888999999997 21 2346778888878999999999987778999999875 9999
Q ss_pred HHHHHHHHHHHHHhhcc
Q 043923 417 LKLSMQRLKAFVDSITT 433 (469)
Q Consensus 417 i~~~l~~L~~~l~~~~~ 433 (469)
+++++++|++++++...
T Consensus 426 i~~~l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 426 ILEAVRRFKEAYGKRNA 442 (449)
T ss_dssp HHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 99999999999976655
No 26
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=9.6e-45 Score=363.31 Aligned_cols=352 Identities=16% Similarity=0.244 Sum_probs=291.6
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.++++++ ++.+.+++.+... .....|++. ..++++++++++.+.++ +++++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~~~~l~~~l~~~~g--~~~~~~~v~~ 87 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIE------------HPIFGYTLP--PENIGDIICNWTKKQYN--WDIQKEWIVF 87 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHH------------SCCCCCCCC--CTTHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--CHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 47899999999885 5667777665311 123467655 58999999999998876 3467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC-CCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS-LNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++||+|+++.|+|..+...+... |.+++.+|++. +++|.+|++++++++++ ++++|
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v 160 (383)
T 3kax_A 88 SAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTN-NRQLCVSPLQKQNDTYAIDFEHLEKQFQQ------GVKLM 160 (383)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHTT------TCCEE
T ss_pred cCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CCEEEeccceecCCcEEEcHHHHHHHhCc------CCeEE
Confidence 999999999999999999999999999999999888887 99999999874 34588999999999843 88999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.++ ..+++++++|+||++|
T Consensus 161 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~~i~~~s~sK~~~ 233 (383)
T 3kax_A 161 LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEE-------LAARTITCMAPSKTFN 233 (383)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HHTTEEEEECSHHHHT
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCcc-------ccCcEEEEEEChhhcc
Confidence 999999999999999999999999999999999999999887766555565555321 1378999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhc---ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCc
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GIS 350 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~ 350 (469)
++|+|+||++++++.+.+.+.... .+++++.+.+.++.+++... .+++++.+++++++++++.+.|++. +++
T Consensus 234 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 234 IAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp CGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 999999999996666655554433 22357889999998888763 5567888999999999999999985 899
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+.++.+++++|++++... .+..+++..|++++||.++||..|+...++++|++++. +++++++++++|++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 311 VMKPEGSFLLWIDCSALN-----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp ECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred EecCCceEEEEEEccccC-----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 999999999999997521 12346777777678999999999987778999999995 9999999999999876
No 27
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=9.9e-45 Score=364.28 Aligned_cols=354 Identities=20% Similarity=0.389 Sum_probs=287.3
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|+++++ ++.+.+++.+... .....|++..|..+|++++++++++.++ +++++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 95 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALE------------QGKTRYGPAAGEPRLREAIAQKLQRDNG--LCYGADNILV 95 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEEE
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEE
Confidence 46899999998874 4556666554210 1134688888899999999999988776 3457889999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|.+.+.+|.+|++++++++++ ++++|+
T Consensus 96 ~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 168 (388)
T 1j32_A 96 TNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLA-EGTPVILPTTVETQFKVSPEQIRQAITP------KTKLLV 168 (388)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHHhcCc------CceEEE
Confidence 999999999999999999999999999999999888877 9999999987555788999999998864 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+..+ ..++++++.|+||++|+
T Consensus 169 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~s~sK~~~~ 241 (388)
T 1j32_A 169 FNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPE-------AYERSVVCSGFAKTYAM 241 (388)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HHHTEEEEEESTTTTTC
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcccc-------ccCCEEEEeechhccCC
Confidence 99999999999999999999999999999999999999887766544555544221 13578999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
+|+|+||++++++ +.+.+..... .+.++.+.|.++.++|... .+++++.+++++++++++.+.|+++ |+++.+
T Consensus 242 ~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 317 (388)
T 1j32_A 242 TGWRVGFLAGPVP-LVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAMPGLECPK 317 (388)
T ss_dssp TTTCCEEEECCHH-HHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC
T ss_pred cccceEEEEeCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence 9999999999654 4444433322 2346788888888888643 3457788889999999999999988 888888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+++|+|++++.. . .+..+++..+++++||.+.||..|+. ++++|++++ .+++++++++++|++++++.
T Consensus 318 ~~~~~~~~~~~~~~-~----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 318 PDGAFYMFPSIAKT-G----RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYA-TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CCBTTEECCBCGGG-T----CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEEecCCC-C----CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEec-CCHHHHHHHHHHHHHHHHHh
Confidence 88899999988641 0 12345777777667999999998864 578999998 59999999999999998753
No 28
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-44 Score=366.88 Aligned_cols=365 Identities=21% Similarity=0.340 Sum_probs=287.6
Q ss_pred CCCCeeeeecccc----cc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHc----CCC
Q 043923 36 NPTGIIQMGLAEN----QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIR----GNK 106 (469)
Q Consensus 36 ~~~~~i~L~~~~n----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~----~~~ 106 (469)
++.++|+|+.+.+ .+ +++.+.+++.+.... .....|++..|..+||+++|+++++.+ ..+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~ 99 (416)
T 1bw0_A 31 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDS-----------QECNGYFPTVGSPEAREAVATWWRNSFVHKEELK 99 (416)
T ss_dssp SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHT-----------TCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTG
T ss_pred cCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhC-----------CccCCcCCCCCCHHHHHHHHHHHHhhhcccccCC
Confidence 3467899999974 23 456666666553110 123568887899999999999998421 112
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 107 VTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 107 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|++++++|.+|++++++++++
T Consensus 100 ~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 176 (416)
T 1bw0_A 100 STIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAY-GIGMHFYNCRPENDWEADLDEIRRLKDD-- 176 (416)
T ss_dssp GGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHHHCCT--
T ss_pred CCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHc-CcEEEEeecCcccCCCCCHHHHHHHhcc--
Confidence 4467899999999999999999999999999999999999999888877 9999999987655688999999988764
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC----CccchhhhhhccccccCCcCC
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP----GFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~ 262 (469)
+++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++. .+.++..+. ..+
T Consensus 177 ----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~---------~~~ 243 (416)
T 1bw0_A 177 ----KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE---------TTV 243 (416)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC---------CSC
T ss_pred ----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc---------CCC
Confidence 788999999999999999999999999999999999999999998777654 334443331 234
Q ss_pred eEEEEccCccccCCCcceEEEEEecCH-----HHHHHHHHhc-ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH
Q 043923 263 RVHIVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATKMS-SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQR 336 (469)
Q Consensus 263 ~~i~i~S~SK~~g~~GlRiG~li~~~~-----~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~ 336 (469)
++++++|+||+|+++|+|+||++++++ .+........ ..++++++.|.++.++|+... ..++++.+++++++
T Consensus 244 ~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~ 321 (416)
T 1bw0_A 244 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEES 321 (416)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHH
T ss_pred cEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHH
Confidence 689999999999999999999998764 2222222221 234578899999999987532 45678888899999
Q ss_pred HHHHHHHHHhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHH
Q 043923 337 HRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSED 415 (469)
Q Consensus 337 ~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e 415 (469)
++++.+.|+++ |+++..+.+|+|+|++++...... ..+..+++..+++++||.+.||..|+. ++++||+++ .+++
T Consensus 322 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~-~~~e 397 (416)
T 1bw0_A 322 AMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRD-IKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT-RPVE 397 (416)
T ss_dssp HHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSS-CCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCHH
T ss_pred HHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCC-CCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEec-CCHH
Confidence 99999999987 888877888899999886421000 012346777777778999999998863 679999997 5899
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 043923 416 TLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 416 ~i~~~l~~L~~~l~~~~~ 433 (469)
++++++++|++++++.++
T Consensus 398 ~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 398 VYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999987665
No 29
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-44 Score=363.66 Aligned_cols=349 Identities=20% Similarity=0.291 Sum_probs=283.9
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEEE
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIVL 116 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~ 116 (469)
++|+|+.+.+.++ ++.+.+++.+... .....|++..|..+|++++++++.+.++ ++++++ +|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~~ 96 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVA------------QGANQYAPMTGVQALREAIAQKTERLYG--YQPDADSDITV 96 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHS--CCCCTTTTEEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHH------------hhccCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEEE
Confidence 6899999988764 4667766665310 1135788878899999999999988766 346788 9999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|+++.|+|+.+...+... |++++.+|++.+ +|.+|++++++++++ ++++|+
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~ 168 (386)
T 1u08_A 97 TAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALS-GGIVKRMALQPP-HFRVDWQEFAALLSE------RTRLVI 168 (386)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCTT-TCCCCHHHHHHHCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeecCcc-cCcCCHHHHHHhhcc------cCEEEE
Confidence 999999999999999999999999999999999988877 999999998753 578999999988753 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.++|.+++++|+++|++||++||+||+|.++.+++....++..+.. ..+++++++|+||.||+
T Consensus 169 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s~sK~~~~ 240 (386)
T 1u08_A 169 LNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQ--------LRERAVAVSSFGKTYHM 240 (386)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHH--------HHTTEEEEEEHHHHTTC
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccC--------ccCcEEEEecchhhcCC
Confidence 9999999999999999999999999999999999999988776654445544421 23689999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
+|+|+||++++++ +.+.+.... ..++.+.+.|.++.++|+.. .+++++.+++++++++++.+.|+++|+++.++
T Consensus 241 ~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 316 (386)
T 1u08_A 241 TGWKVGYCVAPAP-ISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNESRLEILPC 316 (386)
T ss_dssp GGGCCEEEECCHH-HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSSSCEECCC
T ss_pred cccceEEEEcCHH-HHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 9999999999644 444444332 23446788888888888753 34578888999999999999999889998888
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
.+|+|+|++++.... .+..++++.+++++||.+.||..|+. ..++++||+++. +++++++++++|++
T Consensus 317 ~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 317 EGTYFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp CBSSEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred CceEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 889999999874300 12335777787788999999988864 246799999985 89999999999864
No 30
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-44 Score=361.38 Aligned_cols=345 Identities=23% Similarity=0.402 Sum_probs=282.4
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.++++++ ++.+.+++.+... .....|++..|..+|++++|+++++.++ +++++++|++
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~v~~ 106 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQ------------KGEVKYTDPRGIYELREGIAKRIGERYK--KDISPDQVVV 106 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCTTCCHHHHHHHHHHHHHHHT--CCCCGGGEEE
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 46899999998765 4556666655311 1124688778899999999999987766 3457899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|.+++++|.+|++++++++++ ++++|+
T Consensus 107 ~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 179 (389)
T 1o4s_A 107 TNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILA-GGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAVL 179 (389)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEEE
T ss_pred ecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------CceEEE
Confidence 999999999999999999999999999999999888877 9999999987545788999999988764 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++ ...++..+.. ..+++++++|+||++|+
T Consensus 180 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~--------~~~~~i~~~s~sK~~~~ 250 (389)
T 1o4s_A 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSE--------GFDRIVYINGFSKSHSM 250 (389)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCS--------SSTTEEEEEESTTTTTC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCC--------CCCcEEEEeechhhcCC
Confidence 99999999999999999999999999999999999999876654 3345555521 24789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
+|+|+||++++++ +.+.+..... .+.++++.|.++.++|.+. +++.++.++++++++.+.|+++|+++.++
T Consensus 251 ~G~r~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 323 (389)
T 1o4s_A 251 TGWRVGYLISSEK-VATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKMGVKFVEP 323 (389)
T ss_dssp GGGCCEEEECCHH-HHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cccceEEEEeCHH-HHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence 9999999999554 4444443322 2447888899888888764 36667888889999999999889888888
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
.+|+|+|++++ . +..++++.+++++||.+.||..|+. ++++||+++. +++++++++++|++++++
T Consensus 324 ~~~~~~~~~~~--~------~~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 324 EGAFYLFFKVR--G------DDVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDFLNS 388 (389)
T ss_dssp SBSSEEEEECS--S------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHHHTC
T ss_pred CcceEEEEeCC--C------CHHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 88999999986 1 1235777777577999999998874 5699999995 999999999999998864
No 31
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-44 Score=366.58 Aligned_cols=357 Identities=20% Similarity=0.319 Sum_probs=285.9
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC-cEEE
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS-KIVL 116 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~ 116 (469)
++|+|+.+.+.++ ++.+.+++.+... .....|++..|..+|++++|+++++.++ ++++++ +|++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~~ 91 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIA------------GGVNQYPPGPGSAPLRRAIAAQRRRHFG--VDYDPETEVLV 91 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEEE
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCCCCCceEEE
Confidence 6799999998764 4666666665310 1145788888899999999999988776 345687 9999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCC-CCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSL-NGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|++.+ .+|.+|++++++++++ ++++|
T Consensus 92 t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~------~~~~v 164 (411)
T 2o0r_A 92 TVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMA-GAHRVTVPLVPDGRGFALDADALRRAVTP------RTRAL 164 (411)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEETTEEECCHHHHHHHCCT------TEEEE
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCEEEEeeccccccCCCCCHHHHHHhhcc------CceEE
Confidence 999999999999999999999999999999999888877 999999998753 3577999999998864 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++....++..+.. ..++++++.|+||.+|
T Consensus 165 ~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~i~~~s~sK~~~ 236 (411)
T 2o0r_A 165 IINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDG--------MAERTITISSAAKMFN 236 (411)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT--------TGGGEEEEEEHHHHTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccC--------CCCCEEEEeechhhcC
Confidence 99999999999999999999999999999999999999987776544445544411 2468999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
++|+|+||++++ +.+.+.+..... .++.+++.|.++.++|+.. .+++++.+++++++++++.+.|++.|+++.+
T Consensus 237 ~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 312 (411)
T 2o0r_A 237 CTGWKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEIGFAVHD 312 (411)
T ss_dssp CTTTCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHTCEECC
T ss_pred CccceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 999999999995 444444443322 2346778888888888643 5567888999999999999999988999888
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----------EPGWFRVCFANMSEDTLKLSMQ 422 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-----------~~~~iRi~~~~~~~e~i~~~l~ 422 (469)
+.+|+|+|++++.... .+..+++..+++++||.+.||..|... .++++||+++. ++++++++++
T Consensus 313 ~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~ 387 (411)
T 2o0r_A 313 SYGTYFLCADPRPLGY----DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIR 387 (411)
T ss_dssp CCBSSEEEEECGGGTC----CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHH
T ss_pred CCeeEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHH
Confidence 8889999999975210 123467777877779999999888432 35789999985 8999999999
Q ss_pred HHHHHHHhhcc
Q 043923 423 RLKAFVDSITT 433 (469)
Q Consensus 423 ~L~~~l~~~~~ 433 (469)
+|++++++.+.
T Consensus 388 ~l~~~~~~~~~ 398 (411)
T 2o0r_A 388 RLSVLAERPAT 398 (411)
T ss_dssp HHGGGGC----
T ss_pred HHHHHHhccCc
Confidence 99988765544
No 32
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.6e-44 Score=364.73 Aligned_cols=359 Identities=16% Similarity=0.273 Sum_probs=288.9
Q ss_pred CCCeeeeecc-ccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-Cc
Q 043923 37 PTGIIQMGLA-ENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SK 113 (469)
Q Consensus 37 ~~~~i~L~~~-~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~ 113 (469)
+..+|||+.| .++++ ++.+.+++.+.... .....|++..|..++++++++++.+.++ +++++ ++
T Consensus 38 ~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~l~~~l~~~~g--~~~~~~~~ 104 (407)
T 3nra_A 38 EGRPVDFSHGDVDAHEPTPGAFDLFSAGVQS-----------GGVQAYTEYRGDLGIRDLLAPRLAAFTG--APVDARDG 104 (407)
T ss_dssp CSCCEETTSCCTTTSCCCTTHHHHHHHHHHH-----------THHHHSCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTS
T ss_pred CCceeeecCcCCCCCCCcHHHHHHHHHHHhc-----------CCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCc
Confidence 4468999996 44343 46666666653110 1234688888999999999999998877 33445 79
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC----CCCcccCHHHHHHHHHHHHhcC
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS----LNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~----~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
|++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|++. +.++.+|++++++++++
T Consensus 105 i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 178 (407)
T 3nra_A 105 LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYVSADETRAGLDLTGLEEAFKA----- 178 (407)
T ss_dssp EEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-----
T ss_pred EEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHc-CCEEEEeecccccccCcCCCcCHHHHHHHHhh-----
Confidence 999999999999999999999999999999999999888887 99999999842 25678999999999875
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. +..+++++++|
T Consensus 179 -~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~-------~~~~~~i~~~s 250 (407)
T 3nra_A 179 -GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAA-------VDAENVVTIMG 250 (407)
T ss_dssp -TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTT-------SCGGGEEEEEC
T ss_pred -CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCc-------ccCCcEEEEeC
Confidence 7889999999999999999999999999999999999999999988777665555554420 03578999999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcc-c-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
+||+||++|+|+||+++++ .+.+.+..... + .+.+++.+.++.+++... ..++++.+++++++++.+.+.|+++
T Consensus 251 ~sK~~g~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (407)
T 3nra_A 251 PSKTESLSGYRLGVAFGSR-AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA---PGWMEDRIARHQAIRDELLHVLRGC 326 (407)
T ss_dssp SSSTTCCGGGCCEEEEECH-HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC---TTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccCCCeeeEEEEEcCH-HHHHHHHHHHhhhccCCChHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999954 44444443322 2 235678888888888753 2346777888888999999999988
Q ss_pred -CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 348 -GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 348 -g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
++.+..+.+|+|+|+.++... .+..+++..|++++||.+.||..|++..++++||+++. +++++++++++|++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 400 (407)
T 3nra_A 327 EGVFARTPQAGSYLFPRLPKLA-----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVT 400 (407)
T ss_dssp TTCBCCCCSBSSEECCBCCCBS-----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCceeccCCeeEEEEEeCCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHH
Confidence 888888888899999987521 12335777777777999999999987778899999996 99999999999999
Q ss_pred HHHhhc
Q 043923 427 FVDSIT 432 (469)
Q Consensus 427 ~l~~~~ 432 (469)
++++.+
T Consensus 401 ~~~~~~ 406 (407)
T 3nra_A 401 LVERYR 406 (407)
T ss_dssp HHHHHB
T ss_pred HHHHhh
Confidence 998765
No 33
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=5.2e-44 Score=356.04 Aligned_cols=332 Identities=17% Similarity=0.175 Sum_probs=278.0
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.|+|+++ ++.+.+++.+. ......|++..+ .+||+++|++++ +++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~v~~ 87 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQN-------------ANKAHLYPDDSM-IELKSTLAQKYK--------VQNENIII 87 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHH-------------GGGTTSCCCTTC-HHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCCCh-HHHHHHHHHHhC--------CCcceEEE
Confidence 57899999999985 56677777653 134567887766 999999999985 57899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+|++ +.++ +|++++++++++ ++++|+
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~-~~~~-~d~~~l~~~l~~------~~~~v~ 158 (365)
T 3get_A 88 GAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQC-GAKCYKTQSI-THNL-DEFKKLYETHKD------EIKLIF 158 (365)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHH-TCEEEECSSS-SCCH-HHHHHHHHHTTT------TEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEecC-CCCC-CCHHHHHHHhCC------CCCEEE
Confidence 999999999999999999999999999999999988888 9999999982 3567 899999998864 899999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc--CCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
+++|+||||.+++.+++++|+++| ++|+++|+||+|+++.| .+....+...... ..+++++++|+||++
T Consensus 159 ~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s~sK~~ 229 (365)
T 3get_A 159 LCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIK--------EFDNVLYLGTFSKLY 229 (365)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHH--------HCTTEEEEEESSSTT
T ss_pred EcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhc--------cCCCEEEEeecchHh
Confidence 999999999999999999999998 57999999999998765 4433345544433 447899999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS 354 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~ 354 (469)
|++|+|+||+++ ++.+.+.+......+.++.+.+.++.++|.+. +++++.+++++++++++.+.|+++|+++.++
T Consensus 230 ~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 304 (365)
T 3get_A 230 GLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMELYKEFAKKHNIKIIDS 304 (365)
T ss_dssp SCTTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHTTCEECCC
T ss_pred cCcchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC
Confidence 999999999999 55555656555555668999999999999864 4578888999999999999999999988776
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.+ .|+|++++.. +..++...|. ++||.+.||..|+ ++++|++++ +++++++++++|++++
T Consensus 305 ~~-~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~---~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 305 YT-NFITYFFDEK-------NSTDLSEKLL-KKGIIIRNLKSYG---LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp SS-SEEEEECSSS-------CHHHHHHHHH-TTTEECEECGGGT---CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred CC-eEEEEECCCC-------CHHHHHHHHH-HCCEEEEECccCC---CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 65 6789999753 2335666665 5699999999887 789999998 7999999999999876
No 34
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=4.8e-44 Score=359.63 Aligned_cols=354 Identities=15% Similarity=0.224 Sum_probs=283.1
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHH-HHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPA-FKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
+.++|||+.+.+.++ ++.+.+++.+... .....|++. ..+ ||+++|+++++.++ +.+++++|
T Consensus 27 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~lr~~la~~l~~~~g--~~~~~~~v 90 (390)
T 1d2f_A 27 TADLLPFTISDMDFATAPCIIEALNQRLM------------HGVFGYSRW--KNDEFLAAIAHWFSTQHY--TAIDSQTV 90 (390)
T ss_dssp ---CEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCS--CCHHHHHHHHHHHHHHSC--CCCCGGGE
T ss_pred CCCeeEeeecCCCCCCCHHHHHHHHHHHh------------CCCCCCCCC--ChHHHHHHHHHHHHHhcC--CCCCHHHE
Confidence 357899999998774 4667777765311 123467764 578 99999999988766 34678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCC-CCcccCHHHHHHHHHHHHhcCCcee
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSL-NGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
++|+|+++++..++.+++++||.|+++.|+|.++...+... |++++.+|++.+ ++|.+|++++++++++ .+++
T Consensus 91 ~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----~~~~ 164 (390)
T 1d2f_A 91 VYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN-QRTVMPVALEKQADGWFCDMGKLEAVLAK-----PECK 164 (390)
T ss_dssp EEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECEECSSSEECCHHHHHHHHTS-----TTEE
T ss_pred EEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHC-CCEEEEeecccCCCccccCHHHHHHHhcc-----CCCe
Confidence 99999999999999999999999999999999999888877 999999998754 3678999999998863 2689
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++|+||||.++|.+++++|+++|++||++||+||+|.++.+++..+.++..+.+ .. ... +.|+||+
T Consensus 165 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~-~d~-~~s~sK~ 234 (390)
T 1d2f_A 165 IMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVAR--------GD-WAL-LTSGSKS 234 (390)
T ss_dssp EEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCC--------SS-EEE-EECSHHH
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcch--------hh-Hhh-ccCccHh
Confidence 9999999999999999999999999999999999999999987776554455544421 11 123 8999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhc----ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMS----SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A- 347 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~- 347 (469)
+|++|+|+||++++++.+.+.+.... .+++++.+.+.++.+++... .+++++.++.++++++.+.+.|++ +
T Consensus 235 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (390)
T 1d2f_A 235 FNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNLTYIADKMNAAFP 311 (390)
T ss_dssp HTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999997655655544332 24457888888888888642 456788889999999999999998 5
Q ss_pred CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++++.++.+++++|++++... .+..+++..+++++||.+.||..|+...++++||+++. +++++++++++|+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 385 (390)
T 1d2f_A 312 ELNWQIPQSTYLAWLDLRPLN-----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINA 385 (390)
T ss_dssp SCCCCCCSBCSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred CCEEecCCccEEEEEEccccC-----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 888888889999999997530 11335777777678999999998875457899999996 789999999999999
Q ss_pred HHhh
Q 043923 428 VDSI 431 (469)
Q Consensus 428 l~~~ 431 (469)
+++.
T Consensus 386 l~~~ 389 (390)
T 1d2f_A 386 IRAV 389 (390)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8764
No 35
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=4.6e-44 Score=364.61 Aligned_cols=352 Identities=14% Similarity=0.174 Sum_probs=283.3
Q ss_pred CCeeeeecccc-ccC-hHHH--HHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAEN-QLS-FDLL--ESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n-~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
.++|||+.|.+ +++ ++.+ .+++.+... . .....|++..|..+|++++|+++.+.+ +++++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~----------~-~~~~~y~~~~g~~~lr~~ia~~~~~~~---~~~~~~~ 112 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLT----------P-DEIFPYAPPQGIEELRDLWQQKMLRDN---PELSIDN 112 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCC----------G-GGTSSCCCTTCCHHHHHHHHHHHHHHC---TTCCGGG
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcC----------c-ccccccCCCCCCHHHHHHHHHHHhccC---cccCCCc
Confidence 47899999998 664 3333 333322210 0 135679988899999999999997663 3467888
Q ss_pred ---EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh-hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 114 ---IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW-RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 114 ---i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
|++|+|+++|+..++.+++++||.|+++.|+|..+...+.. . |++++.+|++.++ |.+|++++++++++. +
T Consensus 113 ~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~-~~~d~~~l~~~l~~~---~ 187 (430)
T 2x5f_A 113 MSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRN-GANLQTYPIFDKD-GHYTTDSLVEALQSY---N 187 (430)
T ss_dssp BCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTT-CCEEEEECCBCTT-SCBCSHHHHHHHHHC---C
T ss_pred cceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhc-CCeEEEEeccCcc-CCcCHHHHHHHHHhc---C
Confidence 99999999999999999999999999999999999988887 7 9999999987533 778999999998741 2
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-----cCeEEEEeccccccccCCCCccchh-hhhhccccccCCcCCe
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-----KNIHLISDEIYSGTVFSSPGFVSIM-EILKDRNCENTQVWNR 263 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-----~~~~iI~Deay~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~ 263 (469)
++++++++++|+||||.+++.+++++|+++|++ ||++||+||+|.++.+++..+.++. .+.. ..++
T Consensus 188 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--------~~~~ 259 (430)
T 2x5f_A 188 KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTN--------LHSN 259 (430)
T ss_dssp SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHT--------TCCT
T ss_pred CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhh--------ccCC
Confidence 368899999999999999999999999999999 9999999999998777655444554 4422 2467
Q ss_pred ---EEEEccCccccCCCcceEEEEEe---cCHHHHHHHHHhc------ccccCcHHHHHHHHHHhc-CchhhHHHHHHHH
Q 043923 264 ---VHIVYSLSKDLGLPGFRVGAIYS---NDDMVVAAATKMS------SFGLVSSQTQYLLSALLS-DKKFTQNYISENK 330 (469)
Q Consensus 264 ---~i~i~S~SK~~g~~GlRiG~li~---~~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~ 330 (469)
+++++|+||+||++|+|+||+++ ++. +.+.+.... ..++++.+.|.++.++|. +..+ .+.+++.+
T Consensus 260 ~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~ 337 (430)
T 2x5f_A 260 AILPIRLDGATKEFFAWGFRVGFMTFGTSDQT-TKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNI 337 (430)
T ss_dssp TEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHH-HHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHH
T ss_pred cceEEEEEecccCCCCCCCCeEEEEEecCCHH-HHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHH
Confidence 89999999999999999999999 554 444443322 234578899999999998 8765 55566689
Q ss_pred HHHHHHHHHHHHHHH----hcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEE
Q 043923 331 KRLKQRHRKLVSGLE----KAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 406 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~----~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iR 406 (469)
++++++++.+.+.|+ +.|+++.++.+|+|+|++++ .. +..+++..+++++||.+.|| .++++|
T Consensus 338 ~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~g------~~~~iR 404 (430)
T 2x5f_A 338 QTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIAL------NATDIR 404 (430)
T ss_dssp HHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEEC------SSSEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEecC------CCCeEE
Confidence 999999999999998 66888888889999999997 21 23357777776579999998 357899
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 407 VCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 407 i~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|+++..+++++++++++|++++++.
T Consensus 405 is~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 405 IAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp EEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9999558999999999999998764
No 36
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.7e-44 Score=362.11 Aligned_cols=362 Identities=18% Similarity=0.269 Sum_probs=287.7
Q ss_pred CCeeeeecccccc---ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC-CCCCc
Q 043923 38 TGIIQMGLAENQL---SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT-FDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~-~~~~~ 113 (469)
.++|||+.+.+.. +++.+.+++.+.... .......|++..|..+||+++|+++.++++ ++ +++++
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~---------~~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~~ 111 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEK---------EYHYTLQYSTTEGDPVLKQQILKLLERMYG--ITGLDEDN 111 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHH---------SHHHHTSCCCTTCCHHHHHHHHHHHHHHHC--CCSCCGGG
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhh---------cchhhcCCCCCCCCHHHHHHHHHHHHhccC--CCCCCccc
Confidence 4789999886532 456666666553110 001245788888999999999999977655 33 56889
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc--CCc
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR--HLK 191 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~--~~~ 191 (469)
|++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|++++ .+|++++++++++.... +.+
T Consensus 112 v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~ 187 (425)
T 1vp4_A 112 LIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQY-LANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQ 187 (425)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGG
T ss_pred EEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCC
Confidence 999999999999999999999999999999999999888877 999999998753 38999999998752110 126
Q ss_pred eeEE-EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 192 VKGV-LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 192 ~~~v-vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
+++| ++++|+||||.++|.+++++|+++|++||++||+||+|+++.+++....++..+. ..+++++++|+
T Consensus 188 ~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~---------~~~~~i~~~s~ 258 (425)
T 1vp4_A 188 VKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG---------GPERVVLLNTF 258 (425)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH---------CTTTEEEEEES
T ss_pred ceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC---------CCCCEEEEecc
Confidence 8887 5789999999999999999999999999999999999998877665445555542 23688999999
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA- 347 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~- 347 (469)
||+|| +|+|+||+++++ .+.+.+..... .++.+++.|.++.++|++..+ .+++++.++.++++++.+.+.|++.
T Consensus 259 sK~~~-~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 335 (425)
T 1vp4_A 259 SKVLA-PGLRIGMVAGSK-EFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKRTVMLNALEEYF 335 (425)
T ss_dssp TTTTC-GGGCEEEEECCH-HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCH-HHHTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccc-cccceEEEeeCH-HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999 999999999964 44444433322 234688999999999987544 6678888999999999999999886
Q ss_pred ----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHH
Q 043923 348 ----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSM 421 (469)
Q Consensus 348 ----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l 421 (469)
|+++..+.+|+|+|++++...+.. ++++.++++ ||.+.||..|+.. .++++||+++..+++++++++
T Consensus 336 ~~~~g~~~~~~~~g~~~~~~~~~~~~~~------~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l 408 (425)
T 1vp4_A 336 SDIPGVKWVKSEGGLFIWLTLPEGFDTW------EMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGI 408 (425)
T ss_dssp TTSTTCEECCCSBSSEEEEECCTTCCTT------TTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHH
T ss_pred CCCCceEEecCCccEEEEEEcCCCCCHH------HHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHH
Confidence 688877888899999998532221 366777766 9999999988653 467999999866899999999
Q ss_pred HHHHHHHHhhcc
Q 043923 422 QRLKAFVDSITT 433 (469)
Q Consensus 422 ~~L~~~l~~~~~ 433 (469)
++|++++++..+
T Consensus 409 ~~l~~~l~~~~~ 420 (425)
T 1vp4_A 409 KRLREVVLEYGK 420 (425)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999987665
No 37
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.3e-43 Score=359.80 Aligned_cols=378 Identities=13% Similarity=0.178 Sum_probs=286.0
Q ss_pred ccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeecccc-----cc-ChHHHHHHHhcCCCccccccCCcccccccccCCC
Q 043923 11 NTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAEN-----QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD 84 (469)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 84 (469)
....+.+++|..........-. ....++|+|+.|++ ++ +++.+.+++.+... .....|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~--~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~ 78 (418)
T 3rq1_A 13 KGKKLKDVIFVTAGQAQADAKE--NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD------------SEHVGYAP 78 (418)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHH--HCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH------------HHHHSCCC
T ss_pred CCCCCCchHHHHHHHHHhhhhh--hcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcc------------cccCCCCC
Confidence 3344555555544443332210 01236899999964 44 45677777766421 23467998
Q ss_pred CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 85 YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 85 ~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
..|.++||+++++++....+.. .+++|++|+|+++|+..++.+++++||.|+++.|+|..|...+... |.+++.+|
T Consensus 79 ~~g~~~lr~~ia~~~~~~~~~~---~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~ 154 (418)
T 3rq1_A 79 IAGIPDFLCAAEKECFGNFRPE---GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDT-GRTLVTYS 154 (418)
T ss_dssp TTCCHHHHHHHHHHHHGGGCCS---SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHT-TCEEEEEC
T ss_pred CCChHHHHHHHHHHHhcccCcc---ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHc-CCEEEEEe
Confidence 8899999999999997654311 1239999999999999999999999999999999999999988887 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCcee-EEEEecC-CCCCCCCCCHHHHHHHHHHHH------hcCeEEEEecccccc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVK-GVLVTNP-SNPLGTTMSRNELNLLVNIIT------EKNIHLISDEIYSGT 236 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~-~vvl~~P-~NPtG~~~s~e~l~~l~~~~~------~~~~~iI~Deay~~~ 236 (469)
++.+ +|.+|++.+++++++.... +++ ++++++| |||||.+++.+++++|+++|+ +||++||+||+|.++
T Consensus 155 ~~~~-~~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~ 231 (418)
T 3rq1_A 155 LFDE-HNNFNHEAFQNRVNELAAK--QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDY 231 (418)
T ss_dssp SBCT-TSSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGG
T ss_pred eeCC-CCCcCHHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccc
Confidence 8643 3789999999998753211 344 7889999 999999999999999999999 899999999999986
Q ss_pred ccCCCCccchhhhhhccccccCCcCCe--EEEEccCccccCCCcceEEEEEe--cCHHHHHHHHHhc------ccccCcH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNR--VHIVYSLSKDLGLPGFRVGAIYS--NDDMVVAAATKMS------SFGLVSS 306 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~--~i~i~S~SK~~g~~GlRiG~li~--~~~~~~~~~~~~~------~~~~~s~ 306 (469)
.+++....++....++ ..++ +++++||||+||++|+|+||+++ +++.+.+.+.... .+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~-------~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (418)
T 3rq1_A 232 SGEKDEVRAFFNKFSH-------LPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICR 304 (418)
T ss_dssp SSCHHHHHGGGGGGTT-------CCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCH
T ss_pred cCChHHHHHHHHHHHh-------cCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCch
Confidence 6544322233333221 2234 58899999999999999999998 2444444443322 2234788
Q ss_pred HHHHHHHHHhcCchhh---HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHH
Q 043923 307 QTQYLLSALLSDKKFT---QNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKI 383 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~l 383 (469)
++|.++..++.+..+. .+.+++.++.++++++.+.+.|+++|+++.++++|+|+|++++. ..++++ .
T Consensus 305 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~-~ 374 (418)
T 3rq1_A 305 PAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPTDS---------ANAICE-E 374 (418)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECTT---------HHHHHH-H
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCCC---------HHHHHH-H
Confidence 9999999999886522 34455677889999999999999989999999999999998752 234555 4
Q ss_pred HHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 384 VYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 384 l~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
|.++||.+.|| ++++||+++.++++++++++++|++++++..+
T Consensus 375 l~~~gi~v~~g-------~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (418)
T 3rq1_A 375 LKKEHIYVIAL-------ANGIRIAACGIPKCQMTGLAEKIYNAMKSLGK 417 (418)
T ss_dssp HHHTTEECEEC-------SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred HHhCCEEEecC-------CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 56789999997 35799999866999999999999999987654
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1e-43 Score=356.91 Aligned_cols=352 Identities=16% Similarity=0.260 Sum_probs=289.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.+++.++ ++.+.+++.+... .....|++ +..++++++++++.+.++ +++++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~--~~~~~~~~l~~~l~~~~g--~~~~~~~v~ 94 (391)
T 4dq6_A 31 TNDLLPMWVADMDFKAAPCIIDSLKNRLE------------QEIYGYTT--RPDSYNESIVNWLYRRHN--WKIKSEWLI 94 (391)
T ss_dssp CSCSEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCBC--CCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHh------------CCCCCCCC--CCHHHHHHHHHHHHHHhC--CCCcHHHeE
Confidence 357899999998875 4667777665311 12345654 458999999999998876 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc--CCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT--SLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+|+|+++|+..++.+++++||+|+++.|+|..+...+... |++++.+|++ .+++|.+|+++++++++ +++
T Consensus 95 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~ 166 (391)
T 4dq6_A 95 YSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN-NRELIISPLQKLENGNYIMDYEDIENKIK-------DVK 166 (391)
T ss_dssp EESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHT-TCEEEECCCEECTTSCEECCHHHHHHHCT-------TEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHc-CCeEEeeeeeecCCCceEeeHHHHHHHhh-------cCC
Confidence 9999999999999999999999999999999999988887 9999999987 56678899999998875 278
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++....++..+.++ ..++++++.|+||.
T Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~~i~~~s~sK~ 239 (391)
T 4dq6_A 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKE-------FEKNTITCMAPTKT 239 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHH-------HHHTEEEEECSHHH
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCcc-------ccCcEEEEEechhh
Confidence 99999999999999999999999999999999999999999877766555555554321 13688999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhc---ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--C
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--G 348 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g 348 (469)
+|++|+|+||++++++.+.+.+.... ..++++.+.+.++.+++... .+++++.+++++++++++.+.|++. +
T Consensus 240 ~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 316 (391)
T 4dq6_A 240 FNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINENMPK 316 (391)
T ss_dssp HTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999997755655554432 23357788888888887653 4567888999999999999999884 8
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+++.++.+++++|++++... .+..++++.|++++||.++||..|+...++++|++++ .+++++++++++|++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 317 LKVRKPEGTYLLWVDFSALG-----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp SEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHHHHH
T ss_pred CEecCCCccEEEEEEhhhcC-----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHHHHh
Confidence 99999999999999997521 1234677777766699999999998777789999999 59999999999999886
No 39
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=4.9e-44 Score=361.69 Aligned_cols=356 Identities=23% Similarity=0.358 Sum_probs=285.2
Q ss_pred CCeeeeecccc---ccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAEN---QLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
.++|+|+.+.+ .++ ++.+.+++.+... .....|++..|..+|++++|+++++.++ +++++++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~ 103 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIK------------EGHNYYGDSEGLPELRKAIVEREKRKNG--VDITPDD 103 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGG
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCCHHH
Confidence 46899999998 554 4555555544210 1123688888899999999999988776 3467899
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|+++|+..++.+++++||.|++++|+|.++...+... |++++.+|.+.+++|.+|++++++++++ +++
T Consensus 104 v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~ 176 (406)
T 1xi9_A 104 VRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFY-GGKPVEYRTIEEEDWQPDIDDIRKKITD------RTK 176 (406)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEEEEGGGTSEECHHHHHHHCCT------TEE
T ss_pred EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCCCcCCcCCHHHHHHhhCc------Cce
Confidence 999999999999999999999999999999999999888877 9999999987545788999999998864 789
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe-EEEEccCcc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR-VHIVYSLSK 272 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~i~i~S~SK 272 (469)
+|++++|+||||.+++.+++++|+++|++||++||+||+|+++.++ ....++..+ ..++ +++++|+||
T Consensus 177 ~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~----------~~~~~~i~~~s~sK 245 (406)
T 1xi9_A 177 AIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-GEHISPGSL----------TKDVPVIVMNGLSK 245 (406)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS-SCCCCHHHH----------CSSSCEEEEEESTT
T ss_pred EEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC-CCCCCHHHc----------CCCceEEEEecccc
Confidence 9999999999999999999999999999999999999999987663 223454444 1367 899999999
Q ss_pred ccCCCcceEEEEE--ecCH---HHHHHHHHhccc-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043923 273 DLGLPGFRVGAIY--SNDD---MVVAAATKMSSF-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK 346 (469)
Q Consensus 273 ~~g~~GlRiG~li--~~~~---~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 346 (469)
++|++|+|+||++ +++. .+.+.+...... ++++.+.|.++.++|+.. .+++++.++.++++++++.+.|++
T Consensus 246 ~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~ 322 (406)
T 1xi9_A 246 VYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYIYKRLNE 322 (406)
T ss_dssp TTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 7651 444444333222 557888999998888543 223677888999999999999998
Q ss_pred c-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 043923 347 A-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLK 425 (469)
Q Consensus 347 ~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~ 425 (469)
+ ++++.++.+|+|+|++++.... .+..+++..+++++||.+.||..|+..+++++||+++ .+++++++++++|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~ 397 (406)
T 1xi9_A 323 IPGISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFE 397 (406)
T ss_dssp STTEECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHH
T ss_pred CCCCeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHH
Confidence 8 7888788889999988864110 1234577777767799999999887545679999998 69999999999999
Q ss_pred HHHHhhcc
Q 043923 426 AFVDSITT 433 (469)
Q Consensus 426 ~~l~~~~~ 433 (469)
+++++..+
T Consensus 398 ~~l~~~~~ 405 (406)
T 1xi9_A 398 KFMKERLK 405 (406)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99987543
No 40
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-44 Score=378.52 Aligned_cols=356 Identities=16% Similarity=0.223 Sum_probs=273.6
Q ss_pred eeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHH-HhHcCCCCC-CCCCcEEEe
Q 043923 40 IIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFM-SEIRGNKVT-FDTSKIVLT 117 (469)
Q Consensus 40 ~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l-~~~~~~~~~-~~~~~i~~t 117 (469)
+|+|+.|++.++++.+.+.+.+. .....|+++.|..+|++++++++ .++++.++. .++++|++|
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~--------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t 171 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDG--------------ILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAV 171 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHH--------------HHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEE
T ss_pred hhecccCCCCCCChHHHHHHHHh--------------hhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEE
Confidence 79999999988776555544432 12357999989999999988765 444432221 256899999
Q ss_pred CChHHHHHHHHHH-----hcCCCCEEEEccCCCcChHHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 118 AGATSANETLMFC-----LAEPGEAFLLPTPYYPGFDRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 118 ~G~~~al~~~~~~-----l~~~gd~Vl~~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+|+++++..++.+ ++++||.|++++|+|..|...+... .|++++.++++++++|.+|+++++++++. +
T Consensus 172 ~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~ 245 (546)
T 2zy4_A 172 EGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP------A 245 (546)
T ss_dssp EHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST------T
T ss_pred CCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC------C
Confidence 9999999999988 5789999999999999998875432 27999999998777899999999876543 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHH--HhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNII--TEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~--~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+++|+++|||||||.+++.+++++|+++| +++|++||+||+|+++.++ +.++... ..+++++++|
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~----------~~~~~i~~~S 312 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAI----------CPENTLLVYS 312 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHH----------CGGGEEEEEE
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHh----------CCCCEEEEEe
Confidence 99999999999999999999999999999 7899999999999986542 3455544 2368999999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHH-------------hc-------------------------ccccCcHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATK-------------MS-------------------------SFGLVSSQTQYL 311 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~-------------~~-------------------------~~~~~s~~~q~~ 311 (469)
|||++|++|+|+||+++++..+.+.+.. .. ....++.+.|.+
T Consensus 313 ~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a 392 (546)
T 2zy4_A 313 FSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQ 392 (546)
T ss_dssp STTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHH
T ss_pred CccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHH
Confidence 9999999999999999976523232210 01 112467777776
Q ss_pred H-----HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccc---cCC-------hhHH
Q 043923 312 L-----SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLR---SNT-------FEAE 376 (469)
Q Consensus 312 ~-----~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~---~~~-------~~~~ 376 (469)
+ .+++.+. ..+.++.++.++++++.+.+.|. .++.+.++++|+|+|++++.... ... ..++
T Consensus 393 ~a~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~ 468 (546)
T 2zy4_A 393 MALFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSST 468 (546)
T ss_dssp HHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCH
Confidence 3 3455543 34578888899999999998886 56666788899999999864210 000 0012
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+++.+++.++||.+.||+.|+. +++++||+++..+++++++++++|+++++++.+
T Consensus 469 ~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 469 GDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp HHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34456677788999999999986 467999999866899999999999999988876
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.1e-44 Score=365.51 Aligned_cols=354 Identities=14% Similarity=0.171 Sum_probs=286.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCccccccc-ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFREL-ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.++|||+.|+|+++ ++.+.+++.+... ... ..|++..|..+||+++|+++++.++ +.+++++|+
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~i~ 109 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLR------------EGVASIYPNLDGLPELKQEASRFAKLFVN--IDIPARACV 109 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHH------------HTGGGSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHh------------CCcCcCCCCCCChHHHHHHHHHHHHHhhC--CCCCcccEE
Confidence 47899999999986 4666666665311 123 6799888999999999999998877 446789999
Q ss_pred EeCChHHHHHHHHHHhc--CCCC--EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 116 LTAGATSANETLMFCLA--EPGE--AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~--~~gd--~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+|+|+++++..++.+++ ++|| .|+++.|+|..+...+... |++++.++++ +.+|.+|+++++++++. ++
T Consensus 110 ~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~~~~~d~~~l~~~l~~-----~~ 182 (437)
T 3g0t_A 110 PTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRIL-GQKFESFDLF-EYRGEKLREKLESYLQT-----GQ 182 (437)
T ss_dssp EESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHH-TCCCEEEEGG-GGCTTHHHHHHHHHHTT-----TC
T ss_pred EeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHc-CCEEEEEeec-CCCCccCHHHHHHHHhc-----CC
Confidence 99999999999999998 9999 9999999999999998887 9999999997 46788899999999832 27
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch-------hhhhhccccccCCcCCeE
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI-------MEILKDRNCENTQVWNRV 264 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~-------~~~~~~~~~~~~~~~~~~ 264 (469)
+++|++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++. .++ ..+.. ..+++
T Consensus 183 ~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~ 252 (437)
T 3g0t_A 183 FCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD--YSHPGEPLYQPSVAN--------YTDNY 252 (437)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC--CCSTTSSCCCCCGGG--------TCSCE
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC--cCcccccchhhccCC--------CCCcE
Confidence 89999999999999999999999999999999999999999998766532 222 23311 35789
Q ss_pred EEEccCccccCCCcceEEEEEecCHHHHHH-----------------HHHhc--ccccCcHHHHHHHHHHhcCchhhHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVAA-----------------ATKMS--SFGLVSSQTQYLLSALLSDKKFTQNY 325 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~~~~~~~~-----------------~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~ 325 (469)
++++|+||.+|++|+|+||++++++.+... +.... ..++++.+.+.++.++|.......++
T Consensus 253 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 332 (437)
T 3g0t_A 253 ILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYN 332 (437)
T ss_dssp EEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCC
T ss_pred EEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHH
Confidence 999999999999999999999965443303 33322 23457889999999888764311222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcee-------cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 326 ISENKKRLKQRHRKLVSGLEKAGISCL-------KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~~~g~~v~-------~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
+++.+++++++++.+.+.|+++|+++. ++.+++|+|++++. . +..++++.|+ ++||.+.||..|+
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~L~-~~gi~v~~~~~~~ 404 (437)
T 3g0t_A 333 FRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKG-M------DSSKLIEKFV-RYGMCAITLKTTG 404 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETT-C------CHHHHHHHHH-HTTEECEESTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCC-C------CHHHHHHHHH-HcCeEEeeccccC
Confidence 678889999999999999999988887 44788999999872 1 2335677766 5599999999887
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 399 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 399 ~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
...++++||+++..+++++++++++|++++++
T Consensus 405 ~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 405 SKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 65558899999966999999999999998764
No 42
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-43 Score=358.07 Aligned_cols=351 Identities=20% Similarity=0.350 Sum_probs=284.8
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.+.+.++ ++.+.+++ +... .....|++..|..+|++++|+++++.++ +++++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~~ 107 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENK------------PEVVYYSHSAGIWELREAFASYYKRRQR--VDVKPENVLV 107 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTC------------CSSCCCCCTTCCHHHHHHHHHHHHHTSC--CCCCGGGEEE
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 46899999998764 45566666 4211 1134688888899999999999997765 3467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|.+.+++|.+ ++++++++++ ++++|+
T Consensus 108 ~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v~ 179 (409)
T 2gb3_A 108 TNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIA-GVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGIV 179 (409)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHH-TCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEEE
Confidence 999999999999999999999999999999999888887 99999999875446665 7888877754 789999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.++|.+++++|+++|++||++||+||+|+++.+++. ..+. + +. ..+++++++|+||++|+
T Consensus 180 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~-~~-------~~~~~i~~~s~sK~~g~ 248 (409)
T 2gb3_A 180 LSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--L-SI-------ESDKVVVIDSVSKKFSA 248 (409)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--G-GS-------CCTTEEEEEESTTTTTC
T ss_pred ECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--c-cc-------CCCCEEEEecchhccCC
Confidence 999999999999999999999999999999999999998766542 2333 1 21 23678999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce-ecC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC-LKS 354 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v-~~~ 354 (469)
+|+|+||++++++.+.+.+......+ +.+.+.|.++.++|+.. .+++++.++.++++++++.+.|+++|+++ ..+
T Consensus 249 ~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 325 (409)
T 2gb3_A 249 CGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETVLKKLEEHGLKRFTKP 325 (409)
T ss_dssp GGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC
T ss_pred ccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCC
Confidence 99999999997734545444443333 57889999998898653 45678888999999999999999888888 778
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHh-----CCeEEeCCCCCCC---CCCCeEEEEeecCCHHHHHHHHHHHHH
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYD-----VKLNISPGSSCHC---TEPGWFRVCFANMSEDTLKLSMQRLKA 426 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~-----~GI~v~pg~~f~~---~~~~~iRi~~~~~~~e~i~~~l~~L~~ 426 (469)
.+|+|+|++++. .+..+++..++++ +||.+.||..|+. ..++++||+++ .+++++++++++|++
T Consensus 326 ~~~~~~~~~~~~-------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~ 397 (409)
T 2gb3_A 326 SGAFYITAELPV-------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLME 397 (409)
T ss_dssp SBSSEEEEECSS-------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHH
T ss_pred CeeEEEEEEeCC-------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHH
Confidence 888999999871 1233577777765 5999999988864 24679999999 699999999999999
Q ss_pred HHHhhcc
Q 043923 427 FVDSITT 433 (469)
Q Consensus 427 ~l~~~~~ 433 (469)
++++.++
T Consensus 398 ~l~~~~~ 404 (409)
T 2gb3_A 398 GLKMFCS 404 (409)
T ss_dssp HHHHHHC
T ss_pred HHHHhhh
Confidence 9987755
No 43
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=5.3e-43 Score=347.18 Aligned_cols=336 Identities=17% Similarity=0.225 Sum_probs=278.1
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
...++|||+.|+|+++ ++.+.+++.+. +.....|+. .+..+|++++|++++ +++++|
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i 71 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDA-------------VVKANRYAK-NEILMLGNKLAAHHQ--------VEAPSI 71 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHT-------------GGGTTSCCH-HHHHHHHHHHHHHTT--------SCGGGE
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHH-------------HhhCcCCCC-CchHHHHHHHHHHhC--------CChHHE
Confidence 3567899999999985 56777777764 233556754 478999999999985 678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+|.+. ++.+|++++++++++ .+++++
T Consensus 72 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~l~~----~~~~~~ 144 (354)
T 3ly1_A 72 LLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIA-GMKVTKVKMLD--NWAFDIEGLKAAVAA----YSGPSI 144 (354)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECCCT--TSCCCHHHHHHHHHT----CSSCEE
T ss_pred EEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhcc----CCCCCE
Confidence 99999999999999999999999999999999999888887 99999999874 578999999999872 128999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcC-CeEEEEccCccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW-NRVHIVYSLSKD 273 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~i~i~S~SK~ 273 (469)
|++++|+||||.+++.+++++|+++| +||+++|+||+|+++.+++.. .+.....+ .. +++++++|+||+
T Consensus 145 v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~-~~~~~~~~--------~~~~~~i~~~s~sK~ 214 (354)
T 3ly1_A 145 VYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRF-RSISPMIT--------QGAENIILLKTFSKI 214 (354)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTC-CCSHHHHH--------TTCSSEEEEEESSST
T ss_pred EEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhcccccc-CCHHHHhh--------hcCCCEEEEeeChhh
Confidence 99999999999999999999999999 899999999999987665432 34444433 33 788999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
+|++|+|+||++++ +.+.+.+......++++++.+.++.++|.+. +++++.+++++++++++.+.|+++|+++.+
T Consensus 215 ~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 289 (354)
T 3ly1_A 215 HAMAGMRVGYAVAH-PTVIALMGRYVAGEKINFSGVDAALASMNDS----AFITYSKKSNDVSRQILLKALEDLKLPYLP 289 (354)
T ss_dssp TCCGGGCCEEEECC-HHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred ccChhhhheeeecC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHCCCeECC
Confidence 99999999999994 5556666666555678999999999999865 457888899999999999999998988876
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+. |+|+|++++. +..++...|. ++||.+. |..++ .++++||+++ +++++++++++|++++++
T Consensus 290 ~~-~~~~~~~~~~--------~~~~~~~~l~-~~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 290 SE-GNFVFHQLVV--------PLKDYQTHMA-DAGVLIG-RAFPP--ADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CC-SSEEEEECSS--------CHHHHHHHHH-HTTEECC-CCCTT--CTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred CC-ceEEEEECCC--------CHHHHHHHHH-HCCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 55 4789999874 1235666665 6799999 76553 5789999997 799999999999999875
No 44
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=4.9e-44 Score=364.62 Aligned_cols=350 Identities=17% Similarity=0.261 Sum_probs=276.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|++|.+.++ ++.+.+++.+..... ........|++..|..+|++++|+++.+. +.+++++|+
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~~~~~y~~~~g~~~l~~~ia~~~~~~----~~~~~~~i~ 123 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHEL-------STIEGYSGYGAEQGAKPLRAAIAKTFYGG----LGIGDDDVF 123 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHT-------TSTTTCCCCCCTTCCHHHHHHHHHHHHTT----TTCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcc-------cccCCccCCCCCCCCHHHHHHHHHHHHcc----CCCCcceEE
Confidence 347899999998875 466666665531100 00023357888889999999999999742 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCcccCHHHHHHHHH
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
+|+|+++++..+ ..++++||.|+++.|+|.++...+... |. +++.++++.++++..|++.
T Consensus 124 ~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 195 (432)
T 3ei9_A 124 VSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------ 195 (432)
T ss_dssp EESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------
T ss_pred ECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHc-CCcccccccccccCceEEeccCcccCCcCChhh------
Confidence 999999999975 677799999999999999998888776 63 6788888765566666443
Q ss_pred HHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
.+++++|++++||||||.+++.+++++|+++|++||++||+||+|+++.+++.. .++..+.. ..++
T Consensus 196 -----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~--------~~~~ 261 (432)
T 3ei9_A 196 -----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFEIPG--------AEEV 261 (432)
T ss_dssp -----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGGSTT--------GGGT
T ss_pred -----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhhcCC--------CCCe
Confidence 137899999999999999999999999999999999999999999987666432 34444421 3468
Q ss_pred EEEEccCccccCCCcceEEEEEecCHH-------HHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDDM-------VVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLK 334 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~~-------~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~ 334 (469)
+++++|+||+||++|+|+||++++++. +...+.... .+..+++++|.++.+++.+.. .+++++.+++++
T Consensus 262 ~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~ 339 (432)
T 3ei9_A 262 AMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIGFYK 339 (432)
T ss_dssp EEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHHHHH
T ss_pred EEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHH
Confidence 899999999999999999999997765 134443332 234478899999888887533 356888999999
Q ss_pred HHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCH
Q 043923 335 QRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSE 414 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~ 414 (469)
++++++.+.|+++|+++.++.+++|+|++++. .+..+++..+++++||.+.||..|++.+++++||+++. ++
T Consensus 340 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~ 411 (432)
T 3ei9_A 340 ENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPN-------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HR 411 (432)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSSSEEEEECTT-------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CH
T ss_pred HHHHHHHHHHHHCCceecCCCcceEEEEECCC-------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CH
Confidence 99999999999999999888788999999983 12346778888888999999999987678899999974 99
Q ss_pred HHHHHHHHHHHHHHH
Q 043923 415 DTLKLSMQRLKAFVD 429 (469)
Q Consensus 415 e~i~~~l~~L~~~l~ 429 (469)
+++++++++|++--+
T Consensus 412 e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 412 ENILEACRRFKQLYK 426 (432)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999886443
No 45
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.2e-43 Score=354.14 Aligned_cols=338 Identities=20% Similarity=0.360 Sum_probs=275.4
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.+.++++ ++.+.+++.+... .....|++..|..+|++++|+++++.++ +++++++|+
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~ 93 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLK------------EGKTHYTDSRGILELREKISELYKDKYK--ADIIPDNII 93 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHSS--CCCCGGGEE
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHH------------cCccCCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 346899999999874 4556666654210 1134688878899999999999998766 446789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.+++++||.|++++|+|..+...+... |.+++.+| +|++++++++++ ++++|
T Consensus 94 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~--------~d~~~l~~~l~~------~~~~v 158 (370)
T 2z61_A 94 ITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFL-GAKPVFCD--------FTVESLEEALSD------KTKAI 158 (370)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEEC--------SSHHHHHHHCCS------SEEEE
T ss_pred ECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeC--------CCHHHHHHhccc------CceEE
Confidence 9999999999999999999999999999999999888877 99999887 478889888754 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+ |+++|++||+++|+||+|.++.+++. ..++..+.. ..+++++++|+||++|
T Consensus 159 ~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~--------~~~~~i~~~s~sK~~~ 225 (370)
T 2z61_A 159 IINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDE--------NLEKTILINGFSKLYA 225 (370)
T ss_dssp EEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCT--------TCSSEEEEEESTTTTT
T ss_pred EEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccC--------CCCcEEEEecChhccC
Confidence 9999999999999977 88999999999999999998766553 344444411 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcC-chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSD-KKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
++|+|+||+++++ .+.+.+..... .++++++.|.++.++|+. . .+++++.++.++++++++.+.|+++|+++.
T Consensus 226 ~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 301 (370)
T 2z61_A 226 MTGWRIGYVISND-EIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKDFGWEVN 301 (370)
T ss_dssp CGGGCCEEEECCH-HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred CccceEEEEEECH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 9999999999965 44444443332 235788899988888865 2 456788889999999999999999898888
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
++.+|+|+|++++. +..+++..+++++||.+.||..|+..+++++||+++ .+++++++++++|+++++
T Consensus 302 ~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 302 NPIGAYYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CCCBTTEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred CCCcceEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 88889999999874 123577777756799999999887544679999999 599999999999999875
No 46
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.4e-43 Score=358.49 Aligned_cols=354 Identities=15% Similarity=0.216 Sum_probs=293.6
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+++.+.++ ++.+.+++.+... .....|++. ..++++++++++.+.++ +++++++|+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~l~~~l~~~~g--~~~~~~~v~ 123 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGR------------EHIFGYNYF--NDDLYQAVIDWERKEHD--YAVVKEDIL 123 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHH------------HCCSSCBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHh------------cCCcCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999988885 4667777765311 123456654 38999999999998877 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++|+..++.+++++||.|+++.|+|.++...+... |.+++.+|++ .+++|.+|++++++++++ +++++
T Consensus 124 ~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~le~~i~~-----~~~~~ 197 (421)
T 3l8a_A 124 FIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN-DHRLVENSLQIINGRFEIDFEQLEKDIID-----NNVKI 197 (421)
T ss_dssp EESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHT-TEEEEEEECEEETTEEECCHHHHHHHHHH-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHC-CCEEEeccccccCCCeeeCHHHHHHHhhc-----cCCeE
Confidence 9999999999999999999999999999999999888877 9999999986 567788999999999973 28999
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+.+..+.++..+.++ ..++++++.|+||++
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~~i~~~s~sK~~ 270 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDAS-------YKDFTIILSSATKTF 270 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTT-------GGGTEEEEECSHHHH
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCch-------hcCcEEEEEeChhhc
Confidence 9999999999999999999999999999999999999999987777655666555331 247889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhc---ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMS---SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS 350 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~ 350 (469)
|++|+|+||++++++.+.+.+.... .+...+++++.++.+++... .+++++.+++++++++++.+.|+++ +++
T Consensus 271 g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~i~ 347 (421)
T 3l8a_A 271 NIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIKLVIKELEAKTKIK 347 (421)
T ss_dssp TCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHCSCE
T ss_pred cCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 9999999999997566666554432 23357888888888888742 5668888999999999999999986 899
Q ss_pred eecCCceEEEEEecccc-cccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHL-LRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~-~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+..+.+++++|++++.. .. ..+++..+++++||.+.||..|+..+++++||+++ .+++++++++++|+++++
T Consensus 348 ~~~~~~~~~~~v~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 348 VMEPEGTYLVWLDFSAYAIA------QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp EECCSBSSEEEEECGGGTCC------TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHHHC-
T ss_pred EeCCCeeEEEEEeccccCCC------HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 99999999999999752 12 12577777777899999999998767889999999 599999999999999875
No 47
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=3.5e-43 Score=349.31 Aligned_cols=321 Identities=18% Similarity=0.297 Sum_probs=261.9
Q ss_pred CCeeeeeccccccChH-HHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLSFD-LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|+|+++++ .+ . +.....|++. +..+||+++|++++ +++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v-----a--------------~~~~~~Y~~~-~~~~lr~~la~~~~--------~~~~~v~~ 80 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL-----T--------------QQTLNRYPEC-QPKAVIENYAQYAG--------VKPEQVLV 80 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC-----C--------------CCCTTSCCCS-SCHHHHHHHHHHHT--------SCGGGEEE
T ss_pred CceEEeeCCCCCCCCCHhH-----h--------------hhhhccCCCc-cHHHHHHHHHHHhC--------CChHHEEE
Confidence 4789999999999753 22 1 1234679876 47999999999995 67899999
Q ss_pred eCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++| |+|+++.|+|..+...+... |++++.+|++ .+|.+|+++++++++ ++++|
T Consensus 81 ~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~-------~~~~v 150 (356)
T 1fg7_A 81 SRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVECRTVPTL--DNWQLDLQGISDKLD-------GVKVV 150 (356)
T ss_dssp ESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHH-TCEEEECCCC--TTSCCCHHHHHTSCT-------TEEEE
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeeCC--CCCCCCHHHHHHHhc-------CCCEE
Confidence 9999999999999999999 99999999999999988887 9999999987 457789999887663 57899
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++||||||.+++.+++++|+++|+ +|+++|+||+|.++. . ..++..+.. ..+++++++|+||+||
T Consensus 151 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~--~--~~~~~~~~~--------~~~~~i~~~s~sK~~g 217 (356)
T 1fg7_A 151 YVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFC--P--QASLAGWLA--------EYPHLAILRTLSKAFA 217 (356)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGS--G--GGCSGGGTT--------TCTTEEEEEESSSTTC
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhc--C--CCcHHHHHh--------hCCCEEEEecchHhhc
Confidence 99999999999999999999999999 999999999999753 1 123333322 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC--Cceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG--ISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g--~~v~~ 353 (469)
++|+|+||++++ +.+.+.+......+++++++|.++.++|.+.++ +++++.+++++++++++.+.|++++ +.+.
T Consensus 218 ~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 293 (356)
T 1fg7_A 218 LAGLRCGFTLAN-EEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLIAALKEIPCVEQVF- 293 (356)
T ss_dssp CGGGCCEEEEEC-HHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHSTTEEEEC-
T ss_pred CchhhhEEEEeC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEC-
Confidence 999999999995 455555655555556889999999999986443 2478888899999999999999886 3433
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+.+|+|+|++++. ..++++.| .++||.++| |..|+. ++++||+++ +++++++++++|+++
T Consensus 294 ~~~~~~~~~~~~~---------~~~l~~~L-~~~gI~v~~~g~~~~~--~~~iRis~~--~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 294 DSETNYILARFKA---------SSAVFKSL-WDQGIILRDQNKQPSL--SGCLRITVG--TREESQRVIDALRAE 354 (356)
T ss_dssp CCSSSEEEEEETT---------HHHHHHHH-HHTTEECEECTTSTTC--TTEEEEECC--CHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEECCC---------HHHHHHHH-HHCCEEEEECCCCCCC--CCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 4567899999861 22566666 577999999 887764 469999998 689999999998753
No 48
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=7.5e-43 Score=353.70 Aligned_cols=377 Identities=15% Similarity=0.215 Sum_probs=287.5
Q ss_pred cccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeecccc-----cc-ChHHHHHHHhcCCCccccccCCccccccccc
Q 043923 8 ATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAEN-----QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELAL 81 (469)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (469)
+........++++..........-. ....++|+|+.|.. ++ +++.+.+++.+... .....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~ 74 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEK--YGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDR------------SHIAS 74 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHH--HCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCH------------HHHHS
T ss_pred hhcccCCCCChHHHHHHHHhhhhhh--ccccceEeccccCccCCCCCcCChHHHHHHHHhcCc------------ccccC
Confidence 4555556666666554443322100 01236899999974 44 45677777766421 23467
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
|++..|.++||+++++++....+. .++++|++|+|+++|+..++.+++++||.|+++.|+|..|...+... |++++
T Consensus 75 Y~~~~g~~~lr~~la~~~~~~~~~---~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~ 150 (413)
T 3t18_A 75 YAPIEGEKDYRKIVIDTLFGPYKP---EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEF-GRNFK 150 (413)
T ss_dssp CCCTTCCHHHHHHHHHHHHGGGCC---SSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHH-TCEEE
T ss_pred cCCCCCCHHHHHHHHHHHhcccCc---cccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHh-CCeEE
Confidence 988889999999999998655431 13449999999999999999999999999999999999999998888 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCcee-EEEEecC-CCCCCCCCCHHHHHHHHHHHH------hcCeEEEEeccc
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVK-GVLVTNP-SNPLGTTMSRNELNLLVNIIT------EKNIHLISDEIY 233 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~-~vvl~~P-~NPtG~~~s~e~l~~l~~~~~------~~~~~iI~Deay 233 (469)
.+|++.+ +|.+|++++++++++.... +++ ++++++| |||||.+++.+++++|+++|+ +||++||+||+|
T Consensus 151 ~~~~~~~-~~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y 227 (413)
T 3t18_A 151 TFEFFTD-DFAFNIDVYKEAIDEGIRD--SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAY 227 (413)
T ss_dssp EECCBCT-TSSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTT
T ss_pred EeeccCC-CCCcCHHHHHHHHHHHhhc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccc
Confidence 9998543 3789999999998753211 455 7888999 999999999999999999999 899999999999
Q ss_pred cccccCCCCccchhhhhhccccccCCcCCe--EEEEccCccccCCCcceEEEEEec--CHHHHHHHHHhc------cccc
Q 043923 234 SGTVFSSPGFVSIMEILKDRNCENTQVWNR--VHIVYSLSKDLGLPGFRVGAIYSN--DDMVVAAATKMS------SFGL 303 (469)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~i~i~S~SK~~g~~GlRiG~li~~--~~~~~~~~~~~~------~~~~ 303 (469)
.++.+++....++....+. ..++ +++++||||+||++|+|+||++++ ++.+.+.+.... .+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (413)
T 3t18_A 228 LEFAGDGDQQRKFFEKFSN-------LPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSN 300 (413)
T ss_dssp GGGSSSSSTTTGGGGGGTT-------CCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSS
T ss_pred ccccCChhhHHHHHHHHhh-------cCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccC
Confidence 9987766544444444332 2233 588999999999999999999982 344444443321 2234
Q ss_pred CcHHHHHHHHHHhcCch---hhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHH
Q 043923 304 VSSQTQYLLSALLSDKK---FTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
++.++|.++..++.+.. | .+++++.++.++++++++.+.|+++|+++.++++|+|+|+++.. ..+++
T Consensus 301 ~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~ 370 (413)
T 3t18_A 301 GTHAAQNILIELERAENKKIY-EQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPTDK---------AFDIV 370 (413)
T ss_dssp CCHHHHHHHHHTTSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEECSC---------HHHHH
T ss_pred CChHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCCCC---------HHHHH
Confidence 78899999999998765 4 45667788899999999999999999999999999999997732 23456
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.+ .++||.+.|| ++++||+++..+++++ +++|.+++++.++
T Consensus 371 ~~l-~~~gv~v~~g-------~~~iRis~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 371 KDL-EKENIFTIPS-------AKGIRVAICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp HHH-HHTTEECEEC-------SSEEEECTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred HHH-HhCCEEEecC-------CCceEEEEeeCCHHHH---HHHHHHHHHHHhc
Confidence 554 6789999997 4689999986677776 8999998887654
No 49
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=9.6e-43 Score=346.66 Aligned_cols=330 Identities=17% Similarity=0.240 Sum_probs=273.3
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|+|+++ ++.+.+++.+.. .....|+. .+..+||+++|++++ +++++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~lr~~la~~~~--------~~~~~v~~ 89 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSS-------------VETEIYPD-GWASSLRKEVADFYQ--------LEEEELIF 89 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCB-------------SCCCBC-----CHHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCC-cchHHHHHHHHHHhC--------CChhhEEE
Confidence 47899999999985 577888877641 33456764 478999999999996 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+|.++ ++.+|++++++++++ ++++|+
T Consensus 90 ~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~ 160 (363)
T 3ffh_A 90 TAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIE-GAEVREIPLLQ--DGEHDLEGMLNAIDE------KTTIVW 160 (363)
T ss_dssp ESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHH-TCEEEEEECCT--TSCCCHHHHHHHCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCCC--CCCcCHHHHHHhccc------CCCEEE
Confidence 999999999999999999999999999999999988888 99999999874 577999999998864 899999
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL 276 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~ 276 (469)
+++|+||||.+++.+++.++++.|++ |+++|+||+|+++.+ +. ..+...... ..+++++++|+||.+|+
T Consensus 161 ~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~-~~~~~~~~~--------~~~~~i~~~s~sK~~g~ 229 (363)
T 3ffh_A 161 ICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ-PEKHEKLVR--------TYKNLIITRTFSKIYGL 229 (363)
T ss_dssp EESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC-CCCCGGGGG--------TCTTEEEEEESSSTTCC
T ss_pred EeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc-ccCHHHHhh--------cCCCEEEEeechhhhcC
Confidence 99999999999999999999998887 999999999998765 32 233333433 45789999999999999
Q ss_pred CcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-cCCceecCC
Q 043923 277 PGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-AGISCLKSN 355 (469)
Q Consensus 277 ~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~g~~v~~~~ 355 (469)
+|+|+||+++ ++.+.+.+......+.++.+.+.++.++|.+. +++++.+++++++++++.+.|++ .|+++.++.
T Consensus 230 ~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 304 (363)
T 3ffh_A 230 ASARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ----AFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN 304 (363)
T ss_dssp SSCCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC
T ss_pred chhceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC
Confidence 9999999999 55555656655556668999999999999864 45788889999999999999999 689887665
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
+ +|+|++++. +..++.+.+. ++||.+.||..|+. ++++|++++ +++++++++++|++++
T Consensus 305 ~-~~~~~~~~~--------~~~~~~~~l~-~~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 305 G-NFVLIDLGI--------EAGTIFSYLE-KNGYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKLL 363 (363)
T ss_dssp S-SEEEEECSS--------CHHHHHHHHH-HTTEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred C-eEEEEECCC--------CHHHHHHHHH-HCCeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHhC
Confidence 5 688999874 1235666665 56999999998865 789999998 8999999999998763
No 50
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.6e-43 Score=353.20 Aligned_cols=342 Identities=22% Similarity=0.358 Sum_probs=277.1
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|.++++ ++.+.+++.+... ....|++..|..+|+++++++++ +++++|++
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~-------------~~~~y~~~~~~~~l~~~la~~~~--------~~~~~v~~ 83 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALG-------------RQDQYAPPAGLPALREALAEEFA--------VEPESVVV 83 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTT-------------TSCSCCCTTCCHHHHHHHHHHHT--------SCGGGEEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHH-------------HhcCCCCCCCCHHHHHHHHHhcC--------CChhhEEE
Confidence 36799999998875 5667777665311 13468887789999999999975 57889999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc--CCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT--SLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.+|.+ . .++.+|++++++++++ ++++
T Consensus 84 ~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~------~~~~ 155 (381)
T 1v2d_A 84 TSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLA-GAKARLVRLDLTP-EGFRLDLSALEKALTP------RTRA 155 (381)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEET-TEEECCHHHHHTTCCT------TEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCCCC-ccCCcCHHHHHHhcCc------CCEE
Confidence 999999999999999999999999999999999888877 9999999986 3 2477899999988753 7899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+ +....++..+ ..++++++.|+||++
T Consensus 156 v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~----------~~~~~~~~~s~sK~~ 224 (381)
T 1v2d_A 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF----------APERTFTVGSAGKRL 224 (381)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH----------CTTTEEEEEEHHHHT
T ss_pred EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh----------cCCCEEEEeechhhc
Confidence 99999999999999999999999999999999999999998766 4333455544 126889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCcee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~ 352 (469)
|++|+|+||++++++.+ +.+.... ..++.+.+.|.++.++|....+ .+++++.+++++++++++.+.|++.|+++.
T Consensus 225 ~~~G~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 302 (381)
T 1v2d_A 225 EATGYRVGWIVGPKEFM-PRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAMGLRVY 302 (381)
T ss_dssp TCGGGCCEEEECCTTTH-HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCcccceEEEEeCHHHH-HHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHCCCEec
Confidence 99999999999965544 3333322 2345788888888888874422 345778889999999999999999999998
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++.+|+|+|++++.. + +..+++++||.+.||..|+. ..++++||+++. +++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 303 VPEGTYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNS 370 (381)
T ss_dssp CCSBSSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC--
T ss_pred CCCcceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 888889999998742 1 44566788999999998875 346799999996 999999999999999987
Q ss_pred hcc
Q 043923 431 ITT 433 (469)
Q Consensus 431 ~~~ 433 (469)
.++
T Consensus 371 ~r~ 373 (381)
T 1v2d_A 371 PRE 373 (381)
T ss_dssp ---
T ss_pred ccc
Confidence 766
No 51
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=9.7e-44 Score=358.75 Aligned_cols=345 Identities=15% Similarity=0.189 Sum_probs=268.6
Q ss_pred CCeeeeecccc--ccCh----HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAEN--QLSF----DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
+++|+|+.|.+ ..++ +.+.+++.+... ......|++..|.++||+++|+++++.++ ..+++
T Consensus 28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~-----------~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~ 94 (401)
T 7aat_A 28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAA-----------KKMDKEYLPIAGLADFTRASAELALGENS--EAFKS 94 (401)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH-----------TTCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceeeeeeeEECCCCCEechHHHHHHHHHhcc-----------cccccCCCCCCCCHHHHHHHHHHhcCCCc--ccccc
Confidence 35899999985 2222 235554443210 01345798888999999999999986655 33568
Q ss_pred CcEEE--eCChHHHHHHHHHHhc---CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 112 SKIVL--TAGATSANETLMFCLA---EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 112 ~~i~~--t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|++ |+|+++++..++.++. ++||.|++++|+|..+...++.. |.+++.+|++.+.++.+|++.+++.+++.
T Consensus 95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 172 (401)
T 7aat_A 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDA-GLQLQAYRYYDPKTCSLDFTGAMEDISKI- 172 (401)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTTS-
T ss_pred CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHc-CCeeEeeeeeccccCccCHHHHHHHHHhC-
Confidence 99987 9999999998887664 89999999999999999999887 99999999865557889999888887641
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+.. ..+++
T Consensus 173 --~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~--------~~~~~ 242 (401)
T 7aat_A 173 --PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIE--------QGIDV 242 (401)
T ss_dssp --CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHH--------TTCCC
T ss_pred --CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHh--------cCCcE
Confidence 34788999999999999999999999999999999999999999998766542 1223333322 45789
Q ss_pred EEEccCccccCCCcceEEEEEec--CHH----HHHHHHHhc--ccccCcHHHHHHHHHHhcCchhh---HHHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSN--DDM----VVAAATKMS--SFGLVSSQTQYLLSALLSDKKFT---QNYISENKKRL 333 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~--~~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l 333 (469)
++++|+||+||++|+|+||++++ ++. +...+.... ...+++...|.++..++.+..+. .+++++.++++
T Consensus 243 i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (401)
T 7aat_A 243 VLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRI 322 (401)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999872 333 223232222 22345677888888888775431 45577888999
Q ss_pred HHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 334 KQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 334 ~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+++++++.+.|++++ +++.++++|+|+|++++. +.+..+++++||.+.|+ +|+++
T Consensus 323 ~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~----------~Ris~ 381 (401)
T 7aat_A 323 ISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKP-----------EQVERLTKEFSIYMTKD----------GRISV 381 (401)
T ss_dssp HHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEG
T ss_pred HHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCH-----------HHHHHHHHhCCEeccCC----------CeEEe
Confidence 999999999999885 777788999999987752 35577778889999764 69999
Q ss_pred ecCCHHHHHHHHHHHHHHH
Q 043923 410 ANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l 428 (469)
+..+++++++++++|++++
T Consensus 382 ~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 382 AGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp GGCCTTTHHHHHHHHHHHH
T ss_pred ccCChhhHHHHHHHHHHHh
Confidence 8777778999999999876
No 52
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.1e-43 Score=360.76 Aligned_cols=345 Identities=14% Similarity=0.194 Sum_probs=271.6
Q ss_pred CCeeeeecc---ccccC---hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLA---ENQLS---FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~---~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.++|||+.| ++..+ ++.+.+++.+.... .....|++..|.++||+++++++....+ ..+++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 115 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEA-----------GLPRGYLPIDGIAAYDASVQKLLLGDDS--PLIAA 115 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhcc-----------CCCCCCCCCCCcHHHHHHHHHHhcCCCc--ccccc
Confidence 378999999 34432 25666666553110 1245799889999999999999975432 11257
Q ss_pred C--cEEEeCChHHHHHHHH--HHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 S--KIVLTAGATSANETLM--FCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~--~i~~t~G~~~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
+ +|++|+|+++|+..++ .+++++||+|++++|+|.++...+... |.+++.+|+..+.++.+|++.+++.+++.
T Consensus 116 ~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-- 192 (420)
T 4f4e_A 116 GRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMA-GFEVVAYPYYDAKTNGVNFDGMLAALNGY-- 192 (420)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHT-TCCEEEEECEETTTTEECHHHHHHHHTTC--
T ss_pred CceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEeeeeccccCccCHHHHHHHHHhC--
Confidence 7 8999999999999994 466799999999999999999988887 99999999843456889999999998631
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC-CccchhhhhhccccccCCcCCeEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+.. ..+++++
T Consensus 193 -~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 263 (420)
T 4f4e_A 193 -EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA--------ANLNVFV 263 (420)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH--------TTCCEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh--------cCCCEEE
Confidence 23788999999999999999999999999999999999999999999877642 2344444433 4578999
Q ss_pred EccCccccCCCcceEEEEEe--cCHHHHH-H---HHHh--cccccCcHHHHHHHHHHhcCchh---hHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYS--NDDMVVA-A---ATKM--SSFGLVSSQTQYLLSALLSDKKF---TQNYISENKKRLKQ 335 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~--~~~~~~~-~---~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~l~~ 335 (469)
++|+||+||++|+|+||+++ ++..+.. . +... ..+..++.+.|.++..++.+..+ ..+++++.++++++
T Consensus 264 ~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 343 (420)
T 4f4e_A 264 SSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRA 343 (420)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999864 3444322 1 2221 23344678899999888888642 15668889999999
Q ss_pred HHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 336 RHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 336 ~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
+++.+.+.|+++ ++++..+++|+|+|+.++. +.+..+++++||.+.|+ .|++++.
T Consensus 344 ~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gI~v~~~----------~Ris~~~ 402 (420)
T 4f4e_A 344 MRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTS-----------AQVDRLREEFGIYAVST----------GRICVAA 402 (420)
T ss_dssp HHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------SEEEGGG
T ss_pred HHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEEec
Confidence 999999999987 7888888999999988752 34566777889999985 2999987
Q ss_pred CCHHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l 428 (469)
++++++++++++|++++
T Consensus 403 ~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 403 LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 78888999999999886
No 53
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2.6e-42 Score=348.86 Aligned_cols=360 Identities=18% Similarity=0.274 Sum_probs=284.4
Q ss_pred Ceeeeecccccc---ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 39 GIIQMGLAENQL---SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 39 ~~i~L~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
++|||+.+.+.. +++.+.+++.+.... . ..... |++..|..+|++++|+++.+.+| +++++++|+
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~------~---~~~~~-y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~ 102 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEK------E---PKSVM-YTPANGIPELREELAAFLKKYDH--LEVSPENIV 102 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHH------C---GGGGS-CCCTTCCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhh------c---ccccc-CCCCCCCHHHHHHHHHHHHHhcC--CCCCcceEE
Confidence 679999886543 556666666553110 0 01234 88888999999999999987665 345789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|.+++ .+|+++++++++.....++++++|
T Consensus 103 ~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v 178 (407)
T 2zc0_A 103 ITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL-GAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLI 178 (407)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEE
T ss_pred EecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEE
Confidence 9999999999999999999999999999999998888877 999999998753 289999999887322122367887
Q ss_pred -EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 196 -LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 196 -vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..+. ..+++++++|+||++
T Consensus 179 ~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~s~sK~~ 249 (407)
T 2zc0_A 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD---------NEGRVIVAGTLSKVL 249 (407)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC---------SSCCEEEEEESTTTT
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC---------CCCCEEEEccccccc
Confidence 5789999999999999999999999999999999999998777655444554441 236889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHhcCchhhH-HHHHHHHHHHHHHHHHHHHHHHhc--CC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALLSDKKFTQ-NYISENKKRLKQRHRKLVSGLEKA--GI 349 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~-~~~~~~~~~l~~~~~~l~~~L~~~--g~ 349 (469)
| +|+|+||++++ +.+.+.+...... ...+++.|.++.++++...+ . +++++.+++++++++++.+.|++. ++
T Consensus 250 ~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 326 (407)
T 2zc0_A 250 G-TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKRDIMLKALENHLPNA 326 (407)
T ss_dssp C-TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred C-CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9 99999999996 4455544443322 23678899999999987643 4 567788889999999999999874 67
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
++..+.+|+|+|++++... +..++++.+++++||.+.||..|+.. .++++||+++..+++++++++++|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 327 EFTKPIAGMFVMFFLPEGA------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL 400 (407)
T ss_dssp CBCCCSBSSEEEEECSTTC------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred EEecCCCcEEEEEEcCCCC------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 7777788899999997422 23357777776669999999988653 467999999865799999999999999
Q ss_pred HHhhc
Q 043923 428 VDSIT 432 (469)
Q Consensus 428 l~~~~ 432 (469)
+++..
T Consensus 401 l~~~~ 405 (407)
T 2zc0_A 401 YKEKF 405 (407)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 97654
No 54
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.3e-43 Score=358.73 Aligned_cols=354 Identities=16% Similarity=0.147 Sum_probs=270.1
Q ss_pred Ceeeeeccccc---cCh-HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 39 GIIQMGLAENQ---LSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 39 ~~i~L~~~~n~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
++|+|+.|+|+ +++ +.+.+++.+.. . . ........|++..|.++||+++|++++ +++++|
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~---~-~----~~~~~~~~Y~~~~G~~~lr~~ia~~~~--------~~~~~i 96 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDF---R-T----KDGVDCRNYGGLLGIADIRELWAEALG--------LPADLV 96 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCC---B-C----TTCCBTTSSCCSSCCHHHHHHHHHHHT--------CCGGGE
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHH---h-h----ccchhhhCCCCCCCCHHHHHHHHHHhC--------CChhHE
Confidence 47999999997 443 33444333210 0 0 000235689999999999999999995 678999
Q ss_pred EEeCChHHHH--HHHHHHhcCC------------CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHH
Q 043923 115 VLTAGATSAN--ETLMFCLAEP------------GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 115 ~~t~G~~~al--~~~~~~l~~~------------gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
++|+|+++++ .+++.++..+ +|+|+++.|+|..|...++.. |++++.+|++.+ .+|++++++
T Consensus 97 ~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~l~~ 172 (422)
T 3d6k_A 97 VAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF-GFEMINVPMTDE---GPDMGVVRE 172 (422)
T ss_dssp EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH-TCEEEEEEEETT---EECHHHHHH
T ss_pred EEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHc-CCEEEecCCCCC---CCCHHHHHH
Confidence 9999999997 6777777655 457999999999999998888 999999999753 289999998
Q ss_pred HHHHHHhcCCceeEEE-EecCCCCCCCCCCHHHHHHHHHHHH-hcCeEEEEeccccccccC--CCCccchhhhhhccccc
Q 043923 181 AYQLAQKRHLKVKGVL-VTNPSNPLGTTMSRNELNLLVNIIT-EKNIHLISDEIYSGTVFS--SPGFVSIMEILKDRNCE 256 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vv-l~~P~NPtG~~~s~e~l~~l~~~~~-~~~~~iI~Deay~~~~~~--~~~~~s~~~~~~~~~~~ 256 (469)
++++ .++++|+ +++||||||.++|.+++++|+++|+ +||++||+||+|.++.|. +..+.++.++....
T Consensus 173 ~l~~-----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~--- 244 (422)
T 3d6k_A 173 LVKD-----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA--- 244 (422)
T ss_dssp HHTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT---
T ss_pred HHhc-----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc---
Confidence 8853 2688887 7899999999999999999999999 999999999999853332 22334554432100
Q ss_pred cCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcC-chhhHHHHHHHHHHH
Q 043923 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSD-KKFTQNYISENKKRL 333 (469)
Q Consensus 257 ~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~l 333 (469)
+..+++++++||||+ ++||+|+||+++++. +.+.+..... .++++.+.|.++.++|++ +.+ .+++++.++.+
T Consensus 245 --~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~~ 319 (422)
T 3d6k_A 245 --GNPNRFWFMSSTSKI-THAGSGVSFFASSKE-NIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL-KAHMLKHAASL 319 (422)
T ss_dssp --TCTTCEEEEEESTTT-SCTTSSCEEEECCHH-HHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH-HHHHHHHHHHH
T ss_pred --CCCCcEEEEcChhhh-cCcccceEEEEeCHH-HHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH-HHHHHHHHHHH
Confidence 144789999999999 679999999999644 4444444332 245789999999999998 444 77888889999
Q ss_pred HHHHHHHHHHHHh----cC-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCC---CCCCe
Q 043923 334 KQRHRKLVSGLEK----AG-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHC---TEPGW 404 (469)
Q Consensus 334 ~~~~~~l~~~L~~----~g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~---~~~~~ 404 (469)
+++++.+.+.|.+ .| +.+..+.+|+|+|++++.. +..++ ..++.++||.++| |..|.. ..+++
T Consensus 320 ~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~ 391 (422)
T 3d6k_A 320 APKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNEN 391 (422)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCE
T ss_pred HHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCe
Confidence 9999988888865 33 5667788899999999752 12234 4456688999999 555641 23679
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 405 FRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 405 iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+||+++..+++++++++++|++++++..+
T Consensus 392 iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 392 IRLAPSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999855899999999999999887643
No 55
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=4.4e-42 Score=342.41 Aligned_cols=340 Identities=18% Similarity=0.272 Sum_probs=278.1
Q ss_pred CCCCCCCCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCC
Q 043923 29 NPYDEVQNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKV 107 (469)
Q Consensus 29 ~~~~~~~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~ 107 (469)
.+|.++. +.++|||+.|+|+++ ++.+.+++.+.... .....|++ .+..+|++++|++++
T Consensus 22 ~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~-~~~~~l~~~la~~~g------- 81 (367)
T 3euc_A 22 GAYHVPD-SHGLVKLDAMENPYRLPPALRSELAARLGE-----------VALNRYPV-PSSEALRAKLKEVMQ------- 81 (367)
T ss_dssp CCSSCCC-CTTCEECCSSCCCCCCCHHHHHHHHHHHHH-----------HHTTCSCC-CCHHHHHHHHHHHHT-------
T ss_pred CCCCCCC-CCCeeEccCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCC-CcHHHHHHHHHHHhC-------
Confidence 3455554 568899999999985 46676666653110 13567876 478999999999986
Q ss_pred CC-CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 108 TF-DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 108 ~~-~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+ ++++|++|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+|++. +|.+|++++++++++.
T Consensus 82 -~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l~~~- 156 (367)
T 3euc_A 82 -VPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFA-GLEFVGVPLRA--DFTLDRGAMLAAMAEH- 156 (367)
T ss_dssp -CCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTT-TCEEEEEECCT--TSCCCHHHHHHHHHHH-
T ss_pred -CCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHHHhhcc-
Confidence 4 6789999999999999999999999999999999999999888877 99999999874 6779999999999764
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
++++|++++|+||||.+++.+++++|+++|++| |+++|+||+|+++. ...... ... ..+++
T Consensus 157 ----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~--~~~~~~---~~~--------~~~~~ 219 (367)
T 3euc_A 157 ----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA--QESWMS---RLT--------DFGNL 219 (367)
T ss_dssp ----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS--SCCSGG---GGG--------TCTTE
T ss_pred ----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc--ccchHH---HHh--------hCCCE
Confidence 789999999999999999999999999999999 99999999999753 222111 222 44788
Q ss_pred EEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
+++.|+||+ +++|+|+||++++ +.+.+.+......+..+.+.+.++.++|+. .+++++.+++++++++++.+.|
T Consensus 220 i~~~s~sK~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l 293 (367)
T 3euc_A 220 LVMRTVSKL-GLAGIRLGYVAGD-PQWLEQLDKVRPPYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAEGM 293 (367)
T ss_dssp EEEEECCCT-TSCSCCEEEEEEC-HHHHHHHGGGCCSSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhh-cccccCceeeeeC-HHHHHHHHHhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 8999999999995 445555655555566889999999999987 3457888889999999999999
Q ss_pred Hhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 043923 345 EKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQR 423 (469)
Q Consensus 345 ~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~ 423 (469)
+++ |+++.++ +|+|+|++++. ..++.+.+ .++||.++||..|+...++++|++++ +++++++++++
T Consensus 294 ~~~~g~~~~~~-~~~~~~~~~~~---------~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~ 360 (367)
T 3euc_A 294 AAHGGVTVFPS-AANFLLARVPD---------AAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEA 360 (367)
T ss_dssp HTSTTCEECCC-SSSEEEEECSC---------HHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHH
T ss_pred HhCCCcEECCC-CCeEEEEECCC---------HHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHH
Confidence 998 8886554 55789998871 22455554 57799999999887666789999998 89999999999
Q ss_pred HHHHHH
Q 043923 424 LKAFVD 429 (469)
Q Consensus 424 L~~~l~ 429 (469)
|+++++
T Consensus 361 l~~~l~ 366 (367)
T 3euc_A 361 FAASLQ 366 (367)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 998864
No 56
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.8e-42 Score=349.05 Aligned_cols=350 Identities=15% Similarity=0.285 Sum_probs=279.4
Q ss_pred CCeeeeecccccc---ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 38 TGIIQMGLAENQL---SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.++|||+.+.+.. +++.+.+++.+.... .......|++..|..+|++++|++++ +++++|
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~---------~~~~~~~y~~~~~~~~l~~~la~~~g--------~~~~~v 94 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILRE---------KGEVALQYSPTEGYAPLRAFVAEWIG--------VRPEEV 94 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHH---------HHHHHTSCCCTTCCHHHHHHHHHHHT--------SCGGGE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHh---------cchhhhCCCCCCCCHHHHHHHHHHhC--------CChhhE
Confidence 3689998875432 556666666553110 00124578887889999999999995 568899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+|.+.+ .+|++++++++++. ++++
T Consensus 95 ~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~---~~d~~~l~~~l~~~-----~~~~ 165 (397)
T 2zyj_A 95 LITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQ-GPRFLTVPAGEE---GPDLDALEEVLKRE-----RPRF 165 (397)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHHC-----CCSC
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEecCcCCC---CCCHHHHHHHHhhc-----CCeE
Confidence 99999999999999999999999999999999999888877 999999998753 28999999998741 5777
Q ss_pred E-EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCc--CCeEEEEccCc
Q 043923 195 V-LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV--WNRVHIVYSLS 271 (469)
Q Consensus 195 v-vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~i~i~S~S 271 (469)
| ++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++....++..+.. . .+++++++|+|
T Consensus 166 v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--------~~~~~~~i~~~s~s 237 (397)
T 2zyj_A 166 LYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAR--------EAGYPGVIYLGSFS 237 (397)
T ss_dssp EEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHH--------HHTCCCEEEEEEST
T ss_pred EEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCc--------ccCCCeEEEEeccc
Confidence 7 57899999999999999999999999999999999999987776554456555522 1 16789999999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-- 347 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-- 347 (469)
|++| +|+|+||+++++ .+.+.+..... .+..+++.|.++.++|++..+ +++++.++.++++++.+.+.|++.
T Consensus 238 K~~~-~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~ 313 (397)
T 2zyj_A 238 KVLS-PGLRVAFAVAHP-EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQAMLHALDREVP 313 (397)
T ss_dssp TTTC-GGGCCEEEECCH-HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cccc-ccceeEEEecCH-HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999 999999999964 44444433322 233688999999999987643 567888999999999999999885
Q ss_pred -CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHH
Q 043923 348 -GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--EPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 348 -g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
|+++..+.+|+|+|++++... +..++++.++++ ||.+.||..|+.. .++++||+++..+++++++++++|
T Consensus 314 ~g~~~~~~~~g~~~~~~~~~~~------~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l 386 (397)
T 2zyj_A 314 KEVRYTRPKGGMFVWMELPKGL------SAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386 (397)
T ss_dssp TTSEECCCSBSSEEEEECSTTC------CHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHH
T ss_pred CCeEEccCCccEEEEEEcCCCC------CHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 788877888899999997422 233567777655 9999999988653 467999999866799999999999
Q ss_pred HHHHHhhc
Q 043923 425 KAFVDSIT 432 (469)
Q Consensus 425 ~~~l~~~~ 432 (469)
++++++..
T Consensus 387 ~~~l~~~~ 394 (397)
T 2zyj_A 387 GRALKGLL 394 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987653
No 57
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=3.1e-43 Score=355.12 Aligned_cols=352 Identities=19% Similarity=0.267 Sum_probs=266.7
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|+|+.|++.++ ++.+.+++.+...... .......|++..|..+||+++|+++. ++ + +++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~~~~~y~~~~g~~~lr~~la~~l~--~g--~-~~~~~v~ 99 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLS-------SPTTCRGYGPDFGLPALRQKLSEDFY--RG--F-VDAKEIF 99 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHT-------SSSCCCCCCCTTCCHHHHHHHHHTTS--TT--S-SCGGGEE
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhccc-------ccccccCCCCCCCCHHHHHHHHHHHH--cC--C-CCHHHEE
Confidence 457899999998764 4556666554211000 00124568877899999999999963 22 3 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCE-EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVE-IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+|+++++..++.. +.+||.|+++.|+|..+...+... |++ ++.+|++.++++..|++.+ +++++
T Consensus 100 ~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~ 166 (400)
T 3asa_A 100 ISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLT-GAKEIIALPCLQENAFFPEFPED-----------THIDI 166 (400)
T ss_dssp EESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHT-TCSEEEEEECCGGGTTCCCCCTT-----------CCCSE
T ss_pred EccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHc-CCcceEecccchhcCcccChhhc-----------cCccE
Confidence 999999999987654 489999999999999999888877 998 9999987555566554321 27889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.++|.+++++|+++|+++|++||+||+|.++.+++....++..+.. ..+++++++|+||+|
T Consensus 167 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s~sK~~ 238 (400)
T 3asa_A 167 LCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPD--------ARFCAIEINSFSKPL 238 (400)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTT--------GGGTEEEEEECCGGG
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCC--------CCCceEEEecchhhc
Confidence 999999999999999999999999999999999999999986655432234443311 235789999999999
Q ss_pred CCCcceEEEEEecCHH-------HHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYSNDDM-------VVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 275 g~~GlRiG~li~~~~~-------~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
|++|+|+||++++++. +...... ...+++++.+.|.++.++|++. ++++.++.++++++++.+.|+
T Consensus 239 g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l~~~L~ 313 (400)
T 3asa_A 239 GFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLLRKALL 313 (400)
T ss_dssp TTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997665 3433322 1233457889999988888754 256778888899999999999
Q ss_pred hcCCceecCCceEEEEEe-cccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 043923 346 KAGISCLKSNAGLFCWVD-MRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRL 424 (469)
Q Consensus 346 ~~g~~v~~~~~g~~~~v~-~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L 424 (469)
+.|+++.++.+|+|+|++ ++...+. .+++..+++++||.+.||..|+..+++++||++. .+++++++++++|
T Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l 386 (400)
T 3asa_A 314 ATGFEVFGGEHAPYLWVKPTQANISD------RDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERL 386 (400)
T ss_dssp HTTCEEEECSSSSEEEEECCCTTCCT------TTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHH
T ss_pred HCCCeeeCCCCceEEEEeccCCCCCH------HHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHH
Confidence 989998888788999999 7643222 1467777777799999999887555789999964 4899999999999
Q ss_pred HHHHHhhcc
Q 043923 425 KAFVDSITT 433 (469)
Q Consensus 425 ~~~l~~~~~ 433 (469)
+++++++..
T Consensus 387 ~~~~~~~~~ 395 (400)
T 3asa_A 387 QMAPALQSH 395 (400)
T ss_dssp HC-------
T ss_pred HHHHHhhhh
Confidence 999875544
No 58
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=5.9e-42 Score=341.31 Aligned_cols=336 Identities=19% Similarity=0.253 Sum_probs=265.3
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|||+.|+|+++ ++.+.+++.+.. .....|++ .+..+|++++|++++ +++++|+
T Consensus 23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~v~ 80 (364)
T 1lc5_A 23 PDQLLDFSANINPLGMPVSVKRALIDNL-------------DCIERYPD-ADYFHLHQALARHHQ--------VPASWIL 80 (364)
T ss_dssp GGGSEECSSCCCTTCCCHHHHHHHHHTG-------------GGGGSCCC-TTCHHHHHHHHHHHT--------SCGGGEE
T ss_pred ccceEEeccccCCCCCCHHHHHHHHHHH-------------HHhhcCCC-CCHHHHHHHHHHHHC--------cCHHHEE
Confidence 346899999998874 566777776641 22457875 478999999999995 5788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.++ +||.|+++.|+|..+...+... |.+++.+|.+.++++.+ ++++.+.+. +++++|
T Consensus 81 ~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~-l~~~~~~~~------~~~~~v 150 (364)
T 1lc5_A 81 AGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQS-GCEIRRWSLREADGWQL-TDAILEALT------PDLDCL 150 (364)
T ss_dssp EESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCC-CTTHHHHCC------TTCCEE
T ss_pred ECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHc-CCeEEEEeCCcccccch-hHHHHHhcc------CCCCEE
Confidence 9999999999999999 6799999999999999888877 99999999875445554 444444332 278889
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++. +...... ..+++++++|+||++|
T Consensus 151 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~--------~~~~~i~~~s~sK~~~ 219 (364)
T 1lc5_A 151 FLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHET---GFIPALK--------DNPHIWVLRSLTKFYA 219 (364)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCC---CSGGGCT--------TCTTEEEEEESTTTTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCcc---chhhHhc--------cCCCEEEEEECchhhc
Confidence 9999999999999999999999999999999999999998655422 2223322 3468899999999999
Q ss_pred CCcceEEEEE-ecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 276 LPGFRVGAIY-SNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
++|+|+||++ + ++.+.+.+......+.++.+.+.++.++|++. +++++.++.++++++++.+.|+++ |+++.+
T Consensus 220 ~~G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 294 (364)
T 1lc5_A 220 IPGLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDS----AWQQATWHWLREEGARFYQALCQLPLLTVYP 294 (364)
T ss_dssp CTTTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCH----HHHHHHHHHHHHHHHHHHHHHHTSTTEEECC
T ss_pred CCccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHhcCCCCEECC
Confidence 9999999999 7 45555555555545568899999999999874 357888889999999999999987 888766
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+. |+|+|++++.. . .++++.++ ++||.+.||..|+...++++||+++ +++++++++++|++++++..
T Consensus 295 ~~-g~~~~~~~~~~--~------~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 295 GR-ANYLLLRCERE--D------IDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp CS-SSEEEEEESCT--T------CCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC----
T ss_pred CC-CeEEEEECCCc--H------HHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhccc
Confidence 54 57888888641 1 13566665 5699999999887555789999997 68899999999999877654
No 59
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.3e-42 Score=349.79 Aligned_cols=346 Identities=14% Similarity=0.194 Sum_probs=270.8
Q ss_pred CCCeeeeeccc---cccC-h--HHHHHHHhc-CCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 37 PTGIIQMGLAE---NQLS-F--DLLESWLDR-NPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 37 ~~~~i~L~~~~---n~~~-~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
..++|||+.|. +..+ + +.+.+++.+ .... .....|++..|..+||+++|+++....+ ..+
T Consensus 25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~ 91 (397)
T 3fsl_A 25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP-----------HGASLYLPMEGLNCYRHAIAPLLFGADH--PVL 91 (397)
T ss_dssp CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSC-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHH
T ss_pred CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCc-----------cccccCCCCCchHHHHHHHHHHHhcCCc--ccc
Confidence 34789999994 3332 2 556666554 3110 1245788888999999999999975432 123
Q ss_pred CCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTS--KIVLTAGATSANETLM--FCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~--~i~~t~G~~~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+++ +|++|+|+++++..++ .+++++||+|+++.|+|..+...++.. |.+++.+|+..+.++.+|++++++++++.
T Consensus 92 ~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 92 KQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGA-GFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp HTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHT-TCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred cccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHc-CCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 678 9999999999999995 456799999999999999999888887 99999999854457889999999998631
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC-CCccchhhhhhccccccCCcCCeE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.++. ....++..+.. ..+++
T Consensus 171 ---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 239 (397)
T 3fsl_A 171 ---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS--------AGLPA 239 (397)
T ss_dssp ---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH--------TTCCE
T ss_pred ---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh--------cCCCE
Confidence 2367889999999999999999999999999999999999999999877653 22344444433 45789
Q ss_pred EEEccCccccCCCcceEEEEEe--cCHHHHH-HHHHh-----cccccCcHHHHHHHHHHhcCchhh---HHHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYS--NDDMVVA-AATKM-----SSFGLVSSQTQYLLSALLSDKKFT---QNYISENKKRL 333 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~--~~~~~~~-~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l 333 (469)
++++|+||+||++|+|+||+++ ++..+.. ..... ..+..++.+.|.++..++.+..+. .+++++.++++
T Consensus 240 i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 319 (397)
T 3fsl_A 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRI 319 (397)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999975 3333332 22222 233345778999998888875421 45678889999
Q ss_pred HHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 334 KQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 334 ~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+++++++.+.|+++ |+++.++++|+|+|++++. +.+..+++++||.+.||. |+++
T Consensus 320 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~----------Ris~ 378 (397)
T 3fsl_A 320 LAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG----------RMCV 378 (397)
T ss_dssp HHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC----------EEEG
T ss_pred HHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC----------eEEE
Confidence 99999999999987 6888888899999988752 345667778999999873 9999
Q ss_pred ecCCHHHHHHHHHHHHHHH
Q 043923 410 ANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l 428 (469)
+..+++++++++++|++++
T Consensus 379 ~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 379 AGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp GGCCTTTHHHHHHHHHHHC
T ss_pred EecCHhhHHHHHHHHHhhC
Confidence 8768888999999998763
No 60
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.5e-42 Score=350.42 Aligned_cols=358 Identities=14% Similarity=0.112 Sum_probs=273.7
Q ss_pred CCCeeeeeccccccChHHHH-HHHhcC--CCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 37 PTGIIQMGLAENQLSFDLLE-SWLDRN--PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..++|||+.|.+........ .+.... .+. ... .......|++..|+++||++||++++ +++++
T Consensus 32 ~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~--~~~----~~~~~~~Y~~~~g~~~lr~~ia~~~~--------~~~~~ 97 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSEQLDFADELLALPGKGDF--KAA----DGTDVRNYGGLDGIVDIRQIWADLLG--------VPVEQ 97 (427)
T ss_dssp TCCCEECCCCSCCHHHHHTTGGGGGCSCTTCC--BCT----TSCBTTSSCCSSCCHHHHHHHHHHHT--------SCGGG
T ss_pred CCceEecCCCCCChHHCCCcHHHHHHhhhHHH--hhc----cchhhcCCCCCCCcHHHHHHHHHHhC--------CCcce
Confidence 34679999998665321111 122221 111 000 01345689998999999999999995 67899
Q ss_pred EEEeCChHHHH--HHHHHHhcC--C----------CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHH
Q 043923 114 IVLTAGATSAN--ETLMFCLAE--P----------GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIE 179 (469)
Q Consensus 114 i~~t~G~~~al--~~~~~~l~~--~----------gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 179 (469)
|++|+|+++++ .+++.++++ + ||+|+++.|+|..+...++.. |.+++.+|++.+ .+|+++++
T Consensus 98 i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~l~ 173 (427)
T 3ppl_A 98 VLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERF-GFEMISVPMNED---GPDMDAVE 173 (427)
T ss_dssp EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHT-TCEEEEEEEETT---EECHHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHc-CCEEEEeCCCCC---CCCHHHHH
Confidence 99999999999 588888876 6 899999999999999999887 999999999853 38999999
Q ss_pred HHHHHHHhcCCceeEEEEe-cCCCCCCCCCCHHHHHHHHHHH-HhcCeEEEEeccccccccCCCC--ccchhhhhhcccc
Q 043923 180 EAYQLAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNII-TEKNIHLISDEIYSGTVFSSPG--FVSIMEILKDRNC 255 (469)
Q Consensus 180 ~~i~~~~~~~~~~~~vvl~-~P~NPtG~~~s~e~l~~l~~~~-~~~~~~iI~Deay~~~~~~~~~--~~s~~~~~~~~~~ 255 (469)
++++. +++++|+++ +||||||.+++.+++++|+++| ++||++||+||+|.++.|++.. ..++..+....
T Consensus 174 ~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-- 246 (427)
T 3ppl_A 174 ELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA-- 246 (427)
T ss_dssp HHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT--
T ss_pred HHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhcc--
Confidence 88841 278887755 7899999999999999999999 9999999999999987776543 23555542100
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRL 333 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l 333 (469)
+..+++++++||||+ +++|+|+||+++++. +.+.+.... ..+.++.+.|.++..++.+.....+++++.++.+
T Consensus 247 ---~~~~~~i~~~S~SK~-~~~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 321 (427)
T 3ppl_A 247 ---GNPNRFWAFTSTSKI-TLAGAGVSFFLTSAE-NRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASL 321 (427)
T ss_dssp ---TCTTSEEEEEESTTT-SCTTSSCEEEECCHH-HHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred ---CCCCcEEEEechhhc-cCcCccEEEEEcCHH-HHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHH
Confidence 134789999999999 579999999999644 444444332 2345788999999999998333377888899999
Q ss_pred HHHHHHHHHHHHhc-----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCC---CCCCe
Q 043923 334 KQRHRKLVSGLEKA-----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHC---TEPGW 404 (469)
Q Consensus 334 ~~~~~~l~~~L~~~-----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~---~~~~~ 404 (469)
+++++.+.+.|.+. ++.+..+.+|+|+|++++.. +..++.. .+.++||.++| |..|.. ..+++
T Consensus 322 ~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~ 393 (427)
T 3ppl_A 322 APKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKN 393 (427)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCE
T ss_pred HHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCe
Confidence 99999988888652 47777888999999999853 1224544 45678999999 555542 24689
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 405 FRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 405 iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+||+++..+++++++++++|++++++..
T Consensus 394 ~Ris~~~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 394 LRLAPSLPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999986689999999999999987653
No 61
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-41 Score=337.24 Aligned_cols=334 Identities=19% Similarity=0.284 Sum_probs=269.3
Q ss_pred CCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.+.++|||+.|+|+++ ++.+.+++.+. +.....|+. .+..+|++++|++++ +++++|
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i 81 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEG-------------IKNLGVYPD-VNYRRLNKSIENYLK--------LKDIGI 81 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHH-------------HHGGGSCCC-TTCHHHHHHHHHHHT--------CCSCEE
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHH-------------HHHhcCCCC-ccHHHHHHHHHHHhC--------CCcceE
Confidence 4567999999999985 45566655542 233456764 578999999999995 678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++++..++.++ |+|+++.|+|..+...+... |++++.+|++.+++ +++++++++++ ++++
T Consensus 82 ~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~~~~l~~~l~-------~~~~ 147 (361)
T 3ftb_A 82 VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKH-GVSVVFSYLDENMC--IDYEDIISKID-------DVDS 147 (361)
T ss_dssp EEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHT-TCEEEEEECCTTSC--CCHHHHHHHTT-------TCSE
T ss_pred EEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHc-CCeEEEeecCcccC--CCHHHHHHhcc-------CCCE
Confidence 99999999999999888 89999999999999988887 99999999986544 45688887764 2789
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.++ . ..+...... ..+++++++|+||.+
T Consensus 148 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~-~~~~~~~~~--------~~~~~i~~~s~sK~~ 217 (361)
T 3ftb_A 148 VIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-P-SSSFVGEIK--------NYSCLFIIRAMTKFF 217 (361)
T ss_dssp EEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-T-TSSSGGGTT--------TCSSEEEEEESSSTT
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-c-ccchhHhcc--------cCCCEEEEeeChhhc
Confidence 999999999999999999999999999999999999999987665 2 234333332 457889999999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ee
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CL 352 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~ 352 (469)
|++|+|+||++..++.+.+.+......++.+++.+.++.++|++. +++++.+++++++++++.+.|+++ +++ +.
T Consensus 218 ~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 293 (361)
T 3ftb_A 218 AMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDT----NYIEESLLWIKKERKRFIEELNKIGFIKRVF 293 (361)
T ss_dssp SCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCH----HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred CCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCCceec
Confidence 999999999994466666666666556678899999999999863 457888899999999999999988 777 66
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++.+ .|+|++++. .+..+++..+++ +||.+.||..|+..+++++|++++ +++++++++++|+++.+.
T Consensus 294 ~~~~-~~~~~~~~~-------~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 294 SPHA-NFVLCRLEN-------ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp CCSS-SEEEEEESS-------SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred CCCC-eEEEEEcCC-------CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 6655 678888875 123356677664 599999999998777889999998 688888888888887653
No 62
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.1e-42 Score=363.28 Aligned_cols=357 Identities=21% Similarity=0.308 Sum_probs=279.4
Q ss_pred CeeeeeccccccChHH-HHHHHhcCCCccccccCCcccccccccCC-CCCCcHHHHHHHHHHHHhHcCCCCCCC-CCcEE
Q 043923 39 GIIQMGLAENQLSFDL-LESWLDRNPDAAGFKRDGQSIFRELALFQ-DYHGLPAFKKALVEFMSEIRGNKVTFD-TSKIV 115 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~ 115 (469)
++|+|+.|.+.++++. +.++.... .. ..|+ +..|.+++++++|+++.+.++.++.+. +++|+
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~--------------~~-~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~ 168 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGA--------------VA-NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLF 168 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHH--------------HT-CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEE
T ss_pred hheeccCCCCCcCCcHHHHHHHHHH--------------Hh-CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEE
Confidence 4799999988887543 44444332 11 2455 678999999999999976523112233 47999
Q ss_pred EeCChHHHHHHHHHH-----hcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccC--CCCcccCHHHHHHHHHHHHhc
Q 043923 116 LTAGATSANETLMFC-----LAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTS--LNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 116 ~t~G~~~al~~~~~~-----l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~ 188 (469)
+|+|+++++..++.+ ++++||.|+++.|+|.++...+... |.+++.++++. +.+|.+|++++++++++
T Consensus 169 ~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~---- 243 (533)
T 3f6t_A 169 PTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELK-DYELVEVDLHSYEKNDWEIEPNEIEKLKDP---- 243 (533)
T ss_dssp EEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGG-GSEEEEECCCEETTTTSEECHHHHHHHSCT----
T ss_pred EECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHc-CCeEEEEEecCCcccCCCCCHHHHHHHhCC----
Confidence 999999999999998 7899999999999999998888877 99999998864 56789999999988754
Q ss_pred CCceeEEEEecCCCCCCCCCCHHHHHHHHHHHH-hcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 189 HLKVKGVLVTNPSNPLGTTMSRNELNLLVNIIT-EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~-~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|++++|+||||.+++.+++++|+++|+ +||++||+||+|.++.++ ..++... ..++++++
T Consensus 244 --~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~---~~~~~~~----------~~~~~i~~ 308 (533)
T 3f6t_A 244 --SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN---FKSIYSV----------VPYNTMLV 308 (533)
T ss_dssp --TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT---CCCHHHH----------SGGGEEEE
T ss_pred --CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC---ccCHhhc----------CCCCEEEE
Confidence 8999999999999999999999999999999 689999999999986553 2344444 33789999
Q ss_pred ccCccccCCCcceEEEEEecCHHHHHHH------------------------------------HHhc--ccccCcHHHH
Q 043923 268 YSLSKDLGLPGFRVGAIYSNDDMVVAAA------------------------------------TKMS--SFGLVSSQTQ 309 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG~li~~~~~~~~~~------------------------------------~~~~--~~~~~s~~~q 309 (469)
+||||.||++|+|+||+++++..+.+.+ .... ...+.+.+.|
T Consensus 309 ~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q 388 (533)
T 3f6t_A 309 YSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQ 388 (533)
T ss_dssp EESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHH
T ss_pred ecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHH
Confidence 9999999999999999999766221111 1111 1234677777
Q ss_pred HH----HHHHhcC----chhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccC-C--------
Q 043923 310 YL----LSALLSD----KKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSN-T-------- 372 (469)
Q Consensus 310 ~~----~~~~l~~----~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~-~-------- 372 (469)
.+ +...|.. ..+ .+++++.++.++++++.+.+.|. .++.+.++.+|+|+|++++...... .
T Consensus 389 ~a~a~~a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~ 466 (533)
T 3f6t_A 389 IMEALFSMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLT 466 (533)
T ss_dssp HHHHHHHHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhh
Confidence 77 3445541 223 66788999999999999999998 8888888999999999987421100 0
Q ss_pred -hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 373 -FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 373 -~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..+..+++.++++++||.+.||+.|+. +++++||+++.++++++++++++|+++++++.+
T Consensus 467 ~~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 467 NNFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 012346778888889999999999986 467999999877999999999999999988766
No 63
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.2e-41 Score=331.89 Aligned_cols=322 Identities=18% Similarity=0.272 Sum_probs=254.6
Q ss_pred CCCCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 35 QNPTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 35 ~~~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..+.++|+|+.|+|+++ ++.+.+++.+. ......|+ ..|..+||+++|++++ +++++
T Consensus 13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~-------------~~~~~~y~-~~~~~~lr~~la~~~~--------~~~~~ 70 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAA-------------AARINRYP-FDAEPRVMRKLAEHFS--------CPEDN 70 (337)
T ss_dssp -CCCCCEECSSCCCCSCCCHHHHHHHHHH-------------GGGTTSCC-TTHHHHHHHHHHHHHT--------SCGGG
T ss_pred cCCCCceEeeCCCCCCCCCHHHHHHHHHh-------------hhhhccCC-CCchHHHHHHHHHHhC--------cCHHH
Confidence 44668899999999986 56777777663 13456786 4688999999999986 67889
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
|++|+|+++++..++.++ +||.|+++.|+|..+...++.. |++++.+|.+. +|.+|+++++++ .+++
T Consensus 71 i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~--------~~~~ 137 (337)
T 3p1t_A 71 LMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVS-GLRHFEIGLTD--DLLLDPNDLAQV--------SRDD 137 (337)
T ss_dssp EEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHTTS-CCEEEEECBCT--TSSBCHHHHTTC--------CTTE
T ss_pred EEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHhh--------cCCC
Confidence 999999999999999988 9999999999999999988887 99999999873 577899988764 2678
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
++++++|+||||.+++.+++.+| |+++++ +|+||+|+++.+... ... . ..+++++++|+||+
T Consensus 138 ~v~i~~p~nptG~~~~~~~l~~l---~~~~~~-~ivDea~~~~~~~~~--~~~----~--------~~~~~i~~~S~sK~ 199 (337)
T 3p1t_A 138 CVVLANPSNPTGQALSAGELDQL---RQRAGK-LLIDETYVDYSSFRA--RGL----A--------YGENELVFRSFSKS 199 (337)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHH---HHHCSE-EEEECTTGGGSSCSS--SCC----C--------CBTTEEEEEESSST
T ss_pred EEEEeCCCCCCCCCCCHHHHHHH---HHhCCc-EEEECCChhhccccc--ccc----c--------cCCCEEEEeeCchh
Confidence 99999999999999998886555 557787 566999997433222 111 1 33678999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK 353 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~ 353 (469)
||++|+|+||+++++. +.+.+......+.++.+.|.++.+++++.++ +.+.++++.++++++.+.|+++|+++.+
T Consensus 200 ~g~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 274 (337)
T 3p1t_A 200 YGLAGLRLGALFGPSE-LIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGYRVAS 274 (337)
T ss_dssp TCCTTTCCEEEECCHH-HHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred ccCcchheEEEEeCHH-HHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCcCEECC
Confidence 9999999999999554 4455555555566888999999999987543 4455666677789999999999998887
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.++ |+|+..+.. +.+..+++++||.+.||..|+. ++++|++++ +++++++++++|+++.+
T Consensus 275 ~~~~-~~~~~~~~~----------~~~~~~l~~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 275 SEAN-FVLVENAAG----------ERTLRFLRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYSD 335 (337)
T ss_dssp CSSS-EEEEECTTT----------HHHHHHHHHTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred CCCe-EEEEEcCCH----------HHHHHHHHHCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence 7775 666666531 1234455678999999998864 679999998 79999999999988753
No 64
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.2e-43 Score=359.11 Aligned_cols=357 Identities=16% Similarity=0.177 Sum_probs=273.8
Q ss_pred cccCCCCCccchhhhhhh------cC-----CCCCCCCCCCeeeeeccccccCh-HHHHHHHhcCCCccccccCCccccc
Q 043923 10 CNTHGQDSSYFLGWQEYE------KN-----PYDEVQNPTGIIQMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFR 77 (469)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~i~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (469)
|..+|. +|+.+| .+. .| ++....++.++|+|+.++|.+++ +.+.+++.+.... .+ .
T Consensus 20 ~~~~g~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~-----~~----~ 87 (427)
T 2hox_A 20 CSEHGR--AFLDGI-ISEGSPKCECNTCYTGPDCSEKIQGCSADVASGDGLFLEEYWKQHKEASAVLV-----SP----W 87 (427)
T ss_dssp CGGGEE--CCTTSC-EETTEECCEECTTEESTTSCEECTTCCEECCSCCCGGGHHHHTTSHHHHCEEE-----CT----T
T ss_pred cCcCCc--eeeccc-cccCCcccccccccCCCCCcccCCCceEEecCcCCCCCCCHHHHHhHHhhhhc-----CC----c
Confidence 344444 899999 665 45 67788888899999999998864 4455554432100 00 1
Q ss_pred ccccCCCCC-C---cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh--------cCCCCEEEEccCCC
Q 043923 78 ELALFQDYH-G---LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL--------AEPGEAFLLPTPYY 145 (469)
Q Consensus 78 ~~~~Y~~~~-g---~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l--------~~~gd~Vl~~~P~y 145 (469)
....|++.. | .++||++||++++++.+ +.+++++|++|+|+++++.+++.+| +++||.|+++.|+|
T Consensus 88 ~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~--~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y 165 (427)
T 2hox_A 88 HRMSYFFNPVSNFISFELEKTIKELHEVVGN--AAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFY 165 (427)
T ss_dssp TTCSSSCSSCCTTCCHHHHHHHHHHHHHHTC--BCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCC
T ss_pred ccccCCCCCCCccchHHHHHHHHHHHHHhCC--cCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCc
Confidence 112498888 8 89999999999987654 3467899999999999999999999 89999999999999
Q ss_pred cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 146 PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 146 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
..|...++.. |++++.+ .+|++.+++++++ ++++|+++|||||||.+++ +.+ + ++
T Consensus 166 ~~~~~~~~~~-g~~~~~~--------~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~--~~ 220 (427)
T 2hox_A 166 PVFREQTKYF-DKKGYVW--------AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K--GC 220 (427)
T ss_dssp HHHHHHHHHS-CBTTEEE--------EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T--TC
T ss_pred ccHHHHHHHc-CCeeeee--------cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c--CC
Confidence 9999988887 8887643 3566777766643 7899999999999999999 532 2 45
Q ss_pred EEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc--cc
Q 043923 226 HLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GL 303 (469)
Q Consensus 226 ~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~ 303 (469)
.+|.|++|. + ++.++..+ ..+++++++||||.+|++|+|+||++++++.+.+.+.++... +.
T Consensus 221 ~~i~d~~~~----~--~~~s~~~~----------~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~ 284 (427)
T 2hox_A 221 KSIYDMVYY----W--PHYTPIKY----------KADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEG 284 (427)
T ss_dssp EEEEECTTC----S--TTTSCCCS----------CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSS
T ss_pred CEEEeeccc----C--CCCCcccc----------CCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 677777663 3 12333333 237899999999999999999999999656666666555433 45
Q ss_pred CcHHHHHHHHHHhcCc-hh-------hHHHHHHHHHHHHHHHHHHHHHHHhc-CCce--------------ecCCceEEE
Q 043923 304 VSSQTQYLLSALLSDK-KF-------TQNYISENKKRLKQRHRKLVSGLEKA-GISC--------------LKSNAGLFC 360 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~-~~-------~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v--------------~~~~~g~~~ 360 (469)
++.+.|.++..+|.+. ++ ..+++++.++.++++++++.+.|+++ |+++ ..+++|+|+
T Consensus 285 ~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~ 364 (427)
T 2hox_A 285 TPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYA 364 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEE
T ss_pred CCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEE
Confidence 8889999998888763 11 14567788899999999999999987 5543 356679999
Q ss_pred EEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 361 WVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 361 ~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|++++.. ..+++..+++++||.++||..|+. +++++|||++. +++++++++++|++++++.
T Consensus 365 ~~~~~~~--------~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~~ 425 (427)
T 2hox_A 365 WVKCEWE--------EDKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIK-TQDDFDQLMYYLKDMVKAK 425 (427)
T ss_dssp EEEECSG--------GGCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSS-CHHHHHHHHHHHHHHHTCC
T ss_pred EEECCCc--------HHHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecC-CHHHHHHHHHHHHHHHhhc
Confidence 9999741 124677788788999999999976 67899999996 8999999999999998653
No 65
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=8.2e-42 Score=345.70 Aligned_cols=344 Identities=14% Similarity=0.199 Sum_probs=267.4
Q ss_pred CCeeeeecccc-ccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAEN-QLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.++|+|++|.+ .++ ++.+.+++.+... .....|++..|.++||+++++++....+ .++++++|.
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 106 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATL------------GTNMDYAPVTGIASFVEEAQKLCFGPTC--AALRDGRIA 106 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCC------------CSCCCCCCTTCCHHHHHHHHHHHHCSSC--HHHHTTCEE
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCc------------cccccCCCCCCcHHHHHHHHHHHcCCCc--hhhccCcee
Confidence 47899999986 443 4455555555411 3356798889999999999999842111 012267884
Q ss_pred --EeCChHHHHHHHH---HHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 116 --LTAGATSANETLM---FCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 116 --~t~G~~~al~~~~---~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.+.|+++++..+. .+++++||.|++++|+|..+...++.. |++++.+|++.+++|.+|++++++++++. ..
T Consensus 107 ~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~ 182 (409)
T 4eu1_A 107 SCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKA-GMELTPYSYYDPATKGLNLAGMLECLDKA---PE 182 (409)
T ss_dssp EEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHT-TCEEEEECCEETTTTEECHHHHHHHHHHS---CT
T ss_pred eeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEEEeecCcCCcCcHHHHHHHHHhC---CC
Confidence 5999999998753 456789999999999999999999887 99999999865567889999999998641 12
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--CccchhhhhhccccccCCcCCeEEEEc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
+++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ..+++++++
T Consensus 183 ~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~ 254 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD--------MVPNLIVAQ 254 (409)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT--------TSSCCEEEE
T ss_pred CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh--------hCCcEEEEe
Confidence 566777799999999999999999999999999999999999998766542 1233343333 447889999
Q ss_pred cCccccCCCcceEEEE--EecCHH----HHHHHHHhc--ccccCcHHHHHHHHHHhcCchhh---HHHHHHHHHHHHHHH
Q 043923 269 SLSKDLGLPGFRVGAI--YSNDDM----VVAAATKMS--SFGLVSSQTQYLLSALLSDKKFT---QNYISENKKRLKQRH 337 (469)
Q Consensus 269 S~SK~~g~~GlRiG~l--i~~~~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~ 337 (469)
||||+||++|+|+||+ +++++. +.+.+.... ....++.+.|.++..+|.+..+. .+++++.++++++++
T Consensus 255 S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (409)
T 4eu1_A 255 SFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVR 334 (409)
T ss_dssp ECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 665655 444443322 23346789999999999886421 445778889999999
Q ss_pred HHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCC
Q 043923 338 RKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMS 413 (469)
Q Consensus 338 ~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~ 413 (469)
+++.+.|+++| +++.++++|+|+|+.++. +++..+++++||.+.|| .||+++..+
T Consensus 335 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gv~v~p~----------~Ri~~~~~~ 393 (409)
T 4eu1_A 335 KRLVSELKACGSVHDWSHIERQVGMMAYTGLTR-----------EQVELLRSEYHIYMTLN----------GRAAVSGLN 393 (409)
T ss_dssp HHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCC
T ss_pred HHHHHHHHhcCCCCCcceecCCceEEEEeCCCH-----------HHHHHHHHcCCEEEcCC----------CEEEEEecC
Confidence 99999999987 788888999999977652 45677887889999986 399998778
Q ss_pred HHHHHHHHHHHHHHH
Q 043923 414 EDTLKLSMQRLKAFV 428 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l 428 (469)
++++++++++|++++
T Consensus 394 ~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 394 STNVEYVSQAIHNVT 408 (409)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHh
Confidence 888999999999876
No 66
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1.1e-41 Score=343.66 Aligned_cols=374 Identities=14% Similarity=0.130 Sum_probs=275.0
Q ss_pred ccccccccCCCCCccchhhhhhhcCCCCCCCCCCCeeeeeccc----c--ccChHHHHHHHhcCCCccccccCCcccccc
Q 043923 5 SGKATCNTHGQDSSYFLGWQEYEKNPYDEVQNPTGIIQMGLAE----N--QLSFDLLESWLDRNPDAAGFKRDGQSIFRE 78 (469)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~----n--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (469)
+.+++.....+.+|+|.-...+..++ +| .|||++|. + +..++.++++.+...+. ..
T Consensus 18 ~~~~~~v~~~p~d~i~~l~~~~~~d~-----~~--kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~-----------~~ 79 (420)
T 4h51_A 18 AERWQKIQAQAPDVIFDLAKRAAAAK-----GP--KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM-----------NL 79 (420)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHHCC-----SS--CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT-----------TC
T ss_pred hHHHhCCCCCCCChHHHHHHHHhcCC-----CC--CEEeecCcccCCCCCCCCCHHHHHHHHHHhcC-----------CC
Confidence 44566677788889887766665553 22 59999982 2 22236677765543111 22
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcChHHHHhh
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL----AEPGEAFLLPTPYYPGFDRDLKW 154 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~~~~~~~ 154 (469)
.+.|.|..|.++||+++++++... .........+.|.|++.|+..++..+ .+|||+|++++|+|+.|...++.
T Consensus 80 ~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~ 156 (420)
T 4h51_A 80 DYEYLPISGYQPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKA 156 (420)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHH
T ss_pred CCCCCCcCChHHHHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHH
Confidence 346999999999999999997422 11112223456889998887766554 47999999999999999999998
Q ss_pred hCCCE-EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 155 RTGVE-IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 155 ~~g~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
. |.+ +...+......+.+|.+.+.+.+... .++++++++++||||||.+++.+++++|+++|+++++++|+||+|
T Consensus 157 a-G~~~V~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y 232 (420)
T 4h51_A 157 A-GWKNICTYAYYDPKTVSLNFEGMKKDILAA---PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY 232 (420)
T ss_dssp T-TCCCEEEEECEEGGGTEECHHHHHHHHHHS---CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred c-CCeEEEeeccccccccCCCHHHHHHHHhcc---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh
Confidence 8 886 44555544567788999888887642 346778888999999999999999999999999999999999999
Q ss_pred cccccCCCCccc--hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH---HHH-----hccccc
Q 043923 234 SGTVFSSPGFVS--IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA---ATK-----MSSFGL 303 (469)
Q Consensus 234 ~~~~~~~~~~~s--~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~---~~~-----~~~~~~ 303 (469)
.++.+++....+ ...... ..++++++.||||.|+++|+|+||++++.+..... ..+ ...+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~ 304 (420)
T 4h51_A 233 QGYASGSLDTDAYAARLFAR--------RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTC 304 (420)
T ss_dssp TTTTTSCHHHHTHHHHHHHH--------TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSS
T ss_pred hhhccCCcccchHHHHhHHh--------hCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCc
Confidence 998766432211 122222 44689999999999999999999998865433221 111 123445
Q ss_pred CcHHHHHHHHHHhcCchhh---HHHHHHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHH
Q 043923 304 VSSQTQYLLSALLSDKKFT---QNYISENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 304 ~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
++...|.++..++.+..+. .++++..+++++++|+.|.+.|+++| |.+..+++|+|.|+.++.
T Consensus 305 ~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~---------- 374 (420)
T 4h51_A 305 PPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSK---------- 374 (420)
T ss_dssp CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCH----------
T ss_pred chHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCH----------
Confidence 6788899999999886532 45567788999999999999999985 455677889999987753
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.++ +|+++||.+.|+. |||+++++++.++.+.++|.+++++..+
T Consensus 375 -e~v~-~L~e~~Vy~~~~g----------Ris~Agl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 375 -AQCE-YCQNHNIFITVSG----------RANMAGLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp -HHHH-HHHHTTEECCTTC----------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred -HHHH-HHHhCCEEEcCCC----------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence 2333 5678899988752 9999988999999999999999987765
No 67
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=1e-41 Score=345.09 Aligned_cols=349 Identities=14% Similarity=0.167 Sum_probs=272.8
Q ss_pred CCeeeeecccc------ccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAEN------QLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.++|||+.|.+ +.+++.+.+++.+.... ......|.+..|..+||+++|+++...++ +.+++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 97 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN----------SSLNHEYLPILGLAEFRTCASRLALGDDS--PALQE 97 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTC----------TTCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhhC----------hhhccCCCCCCCCHHHHHHHHHHHhcCCC--CccCC
Confidence 56899999973 23446677776653100 01345788788999999999999964333 22468
Q ss_pred CcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEEccCCCcChHHHHhhhCCCE-EEEeeccCCCCcccCHHHHHHH
Q 043923 112 SKIVL--TAGATSANETLMF--CLAEPG-----EAFLLPTPYYPGFDRDLKWRTGVE-IVPIQCTSLNGFQITETAIEEA 181 (469)
Q Consensus 112 ~~i~~--t~G~~~al~~~~~--~l~~~g-----d~Vl~~~P~y~~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~l~~~ 181 (469)
++|++ |+|+++|+..++. .++.+| |.|+++.|+|..+...+... |++ ++.++++.+++|.+|+++++++
T Consensus 98 ~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~ 176 (412)
T 1ajs_A 98 KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTA-GFKDIRSYRYWDTEKRGLDLQGFLSD 176 (412)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHT-TCSCEEEEECEETTTTEECHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHc-CCceeEEEeeecCCCCccCHHHHHHH
Confidence 89999 9999999999964 456799 99999999999999888887 999 9999985445788999999998
Q ss_pred HHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC--CCccchhhhhhccccccCC
Q 043923 182 YQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS--PGFVSIMEILKDRNCENTQ 259 (469)
Q Consensus 182 i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~--~~~~s~~~~~~~~~~~~~~ 259 (469)
+++. .++++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++ ....++..+..
T Consensus 177 l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-------- 245 (412)
T 1ajs_A 177 LENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS-------- 245 (412)
T ss_dssp HHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH--------
T ss_pred HHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc--------
Confidence 8742 2367788899999999999999999999999999999999999999876653 12234443422
Q ss_pred cCCeEEEEccCccccCCCcceEEEEEe---cCHH---HHHHHHH-h-cccccCcHHHHHHHHHHhcCchhh---HHHHHH
Q 043923 260 VWNRVHIVYSLSKDLGLPGFRVGAIYS---NDDM---VVAAATK-M-SSFGLVSSQTQYLLSALLSDKKFT---QNYISE 328 (469)
Q Consensus 260 ~~~~~i~i~S~SK~~g~~GlRiG~li~---~~~~---~~~~~~~-~-~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~ 328 (469)
..++++++.|+||.||++|+|+||+++ +++. +...+.. . ..+..++++.|.++.++|++..+. .+++++
T Consensus 246 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 325 (412)
T 1ajs_A 246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKT 325 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 347899999999999988999999998 5442 2232332 2 223335889999999999876411 456788
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 329 NKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
.+++++++++++.+.|++++ +++..+.+|+|+|+.++. +++..+++++||.+.|+
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~---------- 384 (412)
T 1ajs_A 326 MADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP-----------KQVEYLINQKHIYLLPS---------- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTT----------
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCH-----------HHHHHHHHhCCEEecCC----------
Confidence 89999999999999999886 787788889999987651 35667777889999874
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 405 FRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 405 iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
+|++++..+++++++++++|++++++.
T Consensus 385 ~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 599998568999999999999998754
No 68
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.2e-41 Score=342.88 Aligned_cols=347 Identities=15% Similarity=0.191 Sum_probs=266.6
Q ss_pred CCeeeeecccc------ccChHHHHHHHhc-CCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 38 TGIIQMGLAEN------QLSFDLLESWLDR-NPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 38 ~~~i~L~~~~n------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.++|||+.|.. ..+++.+.+++.+ .... .....|++..|..+||+++++++...++ +.++
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~ 95 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS-----------SYNHEYLGITGLPSLTSNAAKIIFGTQS--DALQ 95 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCT-----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCc-----------ccccCCCCCCCcHHHHHHHHHHHhcCCC--CCCC
Confidence 46899999873 1344666666655 3211 1245688888999999999999975433 2346
Q ss_pred CCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVL--TAGATSANETLM--FCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~--t~G~~~al~~~~--~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+++|++ |+|+++++.+++ ..++.+||+|+++.|+|..+...+... |++++.+|.....++.+|++++++++++.
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 173 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQ-GLKTATYPYWANETKSLDLNGFLNAIQKA- 173 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTT-TCCEEEEECEETTTTEECHHHHHHHHHHS-
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHc-CceEEEEeeecCCCCccCHHHHHHHHHhC-
Confidence 889999 999999999883 344579999999999999999988887 99999999822236789999999998751
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC--CCccchhhhhhccccccCCcCC--
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS--PGFVSIMEILKDRNCENTQVWN-- 262 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~-- 262 (469)
.+...++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++ ....++..+.. ..+
T Consensus 174 --~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 243 (412)
T 1yaa_A 174 --PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE--------KLSTV 243 (412)
T ss_dssp --CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH--------HTTTT
T ss_pred --CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh--------cCCCC
Confidence 1124455569999999999999999999999999999999999999876654 12223333322 224
Q ss_pred -eEEEEccCccccCCCcceEEEEE--e----cCHH----HHHHHHH-hc-ccccCcHHHHHHHHHHhcCchhh---HHHH
Q 043923 263 -RVHIVYSLSKDLGLPGFRVGAIY--S----NDDM----VVAAATK-MS-SFGLVSSQTQYLLSALLSDKKFT---QNYI 326 (469)
Q Consensus 263 -~~i~i~S~SK~~g~~GlRiG~li--~----~~~~----~~~~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~---~~~~ 326 (469)
++++++|+||+||++|+|+||++ + .++. +.+.+.. .. .+..++.+.|.++.++|++..+. .+++
T Consensus 244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 323 (412)
T 1yaa_A 244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDM 323 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred cceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHH
Confidence 89999999999997899999998 6 1333 4444433 22 23345789999999999886421 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
++.+++++++++++.+.|++++ +++.++.+|+|+|+.++. +.+..+++++||.+.|
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~--------- 383 (412)
T 1yaa_A 324 VTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP-----------QMVKRLEETHAVYLVA--------- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCT---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCH-----------HHHHHHHHhCCEEecc---------
Confidence 8899999999999999999886 888888899999986642 2346777778999986
Q ss_pred CeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 403 GWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 403 ~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++||+++..+++++++++++|+++++.
T Consensus 384 -~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 -SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp -TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred -CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 379999866899999999999999864
No 69
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.2e-41 Score=345.95 Aligned_cols=354 Identities=16% Similarity=0.196 Sum_probs=272.9
Q ss_pred CCeeeeeccccc---cCh-HHHHHHHh--cCCCccccccCCcccccccccC-CCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 38 TGIIQMGLAENQ---LSF-DLLESWLD--RNPDAAGFKRDGQSIFRELALF-QDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 38 ~~~i~L~~~~n~---~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y-~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
.+.|||+.|.+. ++. +.+.+++. +.. ..-.....| ++..|+++||+++|++++ ++
T Consensus 25 ~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~Yp~~~~g~~~lr~~ia~~~~--------~~ 86 (423)
T 3ez1_A 25 GLNLNMQRGQPADADFDLSNGLLTVLGAEDVR----------MDGLDLRNYPGGVAGLPSARALFAGYLD--------VK 86 (423)
T ss_dssp TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCE----------ETTEETTSSCSCTTCCHHHHHHHHHHTT--------SC
T ss_pred CceEecCCCCCChHhCCCcHHHHHHHhhhHHh----------hcchhhhCCCCCCCChHHHHHHHHHHhC--------CC
Confidence 367999999877 332 23444432 210 001234679 788899999999999985 67
Q ss_pred CCcEEEeCChHHHHH--HHHHHhcC--C---------CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHH
Q 043923 111 TSKIVLTAGATSANE--TLMFCLAE--P---------GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETA 177 (469)
Q Consensus 111 ~~~i~~t~G~~~al~--~~~~~l~~--~---------gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 177 (469)
+++|++|+|+++++. +++.+++. + ||.|+++.|+|..+...+... |.+++.+|++.+ .+|+++
T Consensus 87 ~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~ 162 (423)
T 3ez1_A 87 AENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL-GFELLTVDMQSD---GPDVDA 162 (423)
T ss_dssp GGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH-TCEEEEEEEETT---EECHHH
T ss_pred hhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc-CCEEEeccCCCC---CCCHHH
Confidence 899999999999998 88888877 7 599999999999999998888 999999999753 389999
Q ss_pred HHHHHHHHHhcCCceeEEEE-ecCCCCCCCCCCHHHHHHHHHHH-HhcCeEEEEeccccccccCC---CCccchhhhhhc
Q 043923 178 IEEAYQLAQKRHLKVKGVLV-TNPSNPLGTTMSRNELNLLVNII-TEKNIHLISDEIYSGTVFSS---PGFVSIMEILKD 252 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl-~~P~NPtG~~~s~e~l~~l~~~~-~~~~~~iI~Deay~~~~~~~---~~~~s~~~~~~~ 252 (469)
+++++++ .+++++|++ ++||||||.+++.+++++|+++| ++||++||+||+|..+.|.+ ....++..+...
T Consensus 163 l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 238 (423)
T 3ez1_A 163 VERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARD 238 (423)
T ss_dssp HHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHH
T ss_pred HHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhc
Confidence 9999851 237888864 48899999999999999999999 99999999999999655544 233455554211
Q ss_pred cccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcC--chhhHHHHHH
Q 043923 253 RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSD--KKFTQNYISE 328 (469)
Q Consensus 253 ~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~--~~~~~~~~~~ 328 (469)
. +..+++++++||||+ +++|+|+||+++++. +.+.+..... .+.++.+.|.++.+++.+ ..+ .+++++
T Consensus 239 ~-----~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~ 310 (423)
T 3ez1_A 239 A-----GYPDRAFVFASTSKI-TFAGAGLGFVASSED-NIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL-EGLMRD 310 (423)
T ss_dssp H-----TCTTSEEEEEESTTT-SCSSSSCEEEEECHH-HHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH-HHHHHH
T ss_pred c-----CCCCeEEEEeCchhh-ccCCcceEEEEeCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH-HHHHHH
Confidence 0 145789999999999 569999999999654 4444443332 234788999999999887 444 777888
Q ss_pred HHHHHHHHHHHHHHHHHh----cC--CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-CCCCCC--
Q 043923 329 NKKRLKQRHRKLVSGLEK----AG--ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-GSSCHC-- 399 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~----~g--~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~~-- 399 (469)
.++.++++++.+.+.|.+ .+ +.+..+.+|+|+|++++.. +. +.+..+++++||.++| |..|+.
T Consensus 311 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------~~-~~~~~~l~~~gv~v~~~g~~~~~~~ 382 (423)
T 3ez1_A 311 HAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-------VA-DRVVKLAEAAGVSLTPAGATYPAGQ 382 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-------CH-HHHHHHHHHTTEECCCTTTTSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-------cH-HHHHHHHHHCCcEEecCcccccCCC
Confidence 888888888888777765 44 6777888999999999753 12 2344556678999999 666653
Q ss_pred -CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 400 -TEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 400 -~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++++||+++..+++++++++++|++++++...
T Consensus 383 ~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 383 DPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2468999999866999999999999999986543
No 70
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.1e-41 Score=333.31 Aligned_cols=326 Identities=18% Similarity=0.255 Sum_probs=261.1
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|||+.|+|+++ ++.+.+++.+. +.....|++..+ .+||+++|++++ +++++|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~ 72 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVEN-------------LNCIRHYPEPDA-GTLRQMLAKRNS--------VDNNAILV 72 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHT-------------GGGGGSCCCTTC-HHHHHHHHHHTT--------CCGGGEEE
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHh-------------HhHHhcCCCCcH-HHHHHHHHHHhC--------cCHHHEEE
Confidence 57899999999986 46677777654 234567888777 999999999985 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec-cCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC-TSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++.+++.++. ||+|+++.|+|..+...+... |++++.+|+ +..+++.+ +++++|
T Consensus 73 t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~~----------------~~~~~v 133 (350)
T 3fkd_A 73 TNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMY-EHEVCFYPSNEDIGEADF----------------SNMDFC 133 (350)
T ss_dssp ESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHT-TCEEEEEETTSCGGGSCC----------------TTCSEE
T ss_pred cCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHc-CCeEEEEecCCccccCcc----------------CCCCEE
Confidence 9999999999999987 999999999999999888887 999999998 64344332 178999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|++.|.++ +||+||+|.++.+.+.. .. .... ..+++++++|+||++|
T Consensus 134 ~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~--~~-~~~~--------~~~~~i~~~S~sK~~~ 200 (350)
T 3fkd_A 134 WLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVI--RP-ADIK--------GRKNLVMVYSFSHAYG 200 (350)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCC--CG-GGGT--------TCSSEEEEEESHHHHS
T ss_pred EEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcch--hh-HHhh--------cCCCEEEEecCchhcc
Confidence 9999999999999999999999988766 99999999986554432 11 2222 4578999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK-FTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK 353 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~ 353 (469)
++|+|+||+++ ++.+.+.+......+.++.+.|.++.++|++.. + .+..++.. ++++++.+.|+++ ++++.+
T Consensus 201 ~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~-~~~~~l~~~L~~~~~~~~~~ 274 (350)
T 3fkd_A 201 IPGLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQF----TLPIRKWQ-RNTVDFITALNRLDGVEVHP 274 (350)
T ss_dssp CGGGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTTT----CCCHHHHH-HHHHHHHHHHHHSTTEEECC
T ss_pred CcchheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHHHH----HHHHHHHH-HHHHHHHHHHhcCCCcEECC
Confidence 99999999999 555666666666666789999999999998765 3 23333333 7788899999988 888766
Q ss_pred CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 354 SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 354 ~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.+ .|+|+.++.. +..++++.|++++||.++||+.|+...++++||+++ +++++++++++|++++++...
T Consensus 275 ~~~-~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~~~~ 344 (350)
T 3fkd_A 275 SGT-TFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEKYEG 344 (350)
T ss_dssp CSS-SEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC---
T ss_pred CCC-cEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHHhcc
Confidence 555 6778888752 234677777765899999999998777889999998 789999999999999988776
No 71
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.6e-41 Score=343.18 Aligned_cols=348 Identities=16% Similarity=0.223 Sum_probs=268.0
Q ss_pred CCeeeeecccc-cc--C---hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCC---
Q 043923 38 TGIIQMGLAEN-QL--S---FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVT--- 108 (469)
Q Consensus 38 ~~~i~L~~~~n-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~--- 108 (469)
+..|+|++|.+ .. + .+.+.+++...... .......|.+..|.++||+++++++. + ..
T Consensus 49 ~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~---------~~~~~~~Y~~~~G~~~lr~~ia~~l~---g--~~~~~ 114 (448)
T 3meb_A 49 PKKVNLGVGAYRDESGKPWILPAVKEAEAIISSD---------LSKYNKEYPPVAGFPLFLEAAQFLMF---G--KDSKA 114 (448)
T ss_dssp TTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHC---------TTTTCCSCCCTTCCHHHHHHHHHHHH---C--TTCHH
T ss_pred CCeEEeecccccCCCCCEechHHHHHHHHHHhhc---------ccCCCCCCCCCcchHHHHHHHHHHhc---C--CCccc
Confidence 35799999876 32 1 24455542221000 00234578888999999999999983 2 11
Q ss_pred CCCCcEEE--eCChHHHHHH--HHHHhcCCCCEEEEccCCCcChHHHHh----hhCCCEEEEeeccCCC-CcccCHHHHH
Q 043923 109 FDTSKIVL--TAGATSANET--LMFCLAEPGEAFLLPTPYYPGFDRDLK----WRTGVEIVPIQCTSLN-GFQITETAIE 179 (469)
Q Consensus 109 ~~~~~i~~--t~G~~~al~~--~~~~l~~~gd~Vl~~~P~y~~~~~~~~----~~~g~~~~~v~~~~~~-~~~~d~~~l~ 179 (469)
+++++|++ |+|+++++.+ .+.+++.+||+|++++|+|..+...+. .. |++++.+|+...+ +|.+|++.++
T Consensus 115 ~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~~~~~~d~e~l~ 193 (448)
T 3meb_A 115 AQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKL-KVPYKEYTYLRKDGELEIDFSNTK 193 (448)
T ss_dssp HHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTT-TSCCEEECCBCTTSCSSBCHHHHH
T ss_pred cCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhC-CCeEEEEeccccccCCCcCHHHHH
Confidence 12689999 9999999987 556677899999999999999998888 77 9999999984333 6889999999
Q ss_pred HHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC--Cccchhhhhhcccccc
Q 043923 180 EAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP--GFVSIMEILKDRNCEN 257 (469)
Q Consensus 180 ~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~--~~~s~~~~~~~~~~~~ 257 (469)
+++++. ..+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+..
T Consensus 194 ~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------ 264 (448)
T 3meb_A 194 KDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD------ 264 (448)
T ss_dssp HHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH------
T ss_pred HHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh------
Confidence 998741 12577889999999999999999999999999999999999999998766541 1223333323
Q ss_pred CCcCCeEEEEccCccccCCCcceEEEE--Ee--------cCH----HHHHHHHHh--cccccCcHHHHHHHHHHhcCchh
Q 043923 258 TQVWNRVHIVYSLSKDLGLPGFRVGAI--YS--------NDD----MVVAAATKM--SSFGLVSSQTQYLLSALLSDKKF 321 (469)
Q Consensus 258 ~~~~~~~i~i~S~SK~~g~~GlRiG~l--i~--------~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~ 321 (469)
..+++++++|+||+||++|+|+||+ ++ +++ .+...+... ..+.+++.+.|.++..+|.+..+
T Consensus 265 --~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l 342 (448)
T 3meb_A 265 --AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRL 342 (448)
T ss_dssp --TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHH
T ss_pred --cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHH
Confidence 3478899999999999999999998 66 444 333333332 23334678999999999988643
Q ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHhc---C------CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCe
Q 043923 322 T---QNYISENKKRLKQRHRKLVSGLEKA---G------ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKL 389 (469)
Q Consensus 322 ~---~~~~~~~~~~l~~~~~~l~~~L~~~---g------~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI 389 (469)
. .+++++.+++++++++++.+.|+++ + +++..+++|+|+|+.++. +++..+++++||
T Consensus 343 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~ll~~~gV 411 (448)
T 3meb_A 343 LQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTP-----------EHVDYLKEKWSI 411 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCH-----------HHHHHHHHhCCE
Confidence 2 3457888999999999999999987 3 566678899999988752 467778888899
Q ss_pred EEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 390 NISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 390 ~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+.||+ .|||++.++++++++++++|++++++.
T Consensus 412 ~v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 412 YLVKAG---------GRMSMCGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp EECSGG---------GEEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred EEeCCC---------cEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 999985 299998778888999999999999844
No 72
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-41 Score=344.32 Aligned_cols=357 Identities=20% Similarity=0.261 Sum_probs=264.2
Q ss_pred CCeeeeeccccccCh---HHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 38 TGIIQMGLAENQLSF---DLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.++|+|+.+.+...+ +.+.+++.+.... . ........|++..|.++||+++|+++.+.++ +.+++++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i 101 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVES------G-KAADALCNYDGPQGKTALLNALAVLLRETLG--WDIEPQNI 101 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHH------T-HHHHHHHSTTCTTSHHHHHHHHHHHHHHHHC--CCCCGGGE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhC------C-cccceeeccCCCCCcHHHHHHHHHHHHHHhC--CCCCcccE
Confidence 478999999887744 3344444432100 0 0001234799999999999999999988877 44789999
Q ss_pred EEeCChHHHHHHHHHHhcCCCC-----EEEEc-cCCCcChHHHHhhh-----CCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLAEPGE-----AFLLP-TPYYPGFDRDLKWR-----TGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd-----~Vl~~-~P~y~~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
++|+|+++|+.+++.+++++|| .|+++ .|+|..+...+... .+..+..++.+. .+|.+|+++++ ++
T Consensus 102 ~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~ 178 (417)
T 3g7q_A 102 ALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IG 178 (417)
T ss_dssp EEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CC
T ss_pred EEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cc
Confidence 9999999999999999999987 89997 99999887654211 144555555331 25678888887 33
Q ss_pred HHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
+++++|++++||||||.+++.+++++|+++|++||+++|+||+|+.+ +.+..+.. ..+ +..++
T Consensus 179 ------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~-~~~~~~~~---~~~-------~~~~~ 241 (417)
T 3g7q_A 179 ------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVP-FPGIIFSE---ARP-------LWNPN 241 (417)
T ss_dssp ------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSC---CCC-------CCCTT
T ss_pred ------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccc-cccccccc---ccc-------CCCCC
Confidence 27899999999999999999999999999999999999999999853 22111111 111 13478
Q ss_pred EEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHHHH-HHHHHHHHHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYISE-NKKRLKQRHRKL 340 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~l~~~~~~l 340 (469)
++++.|+|| ++++|+|+||+++++ .+.+.+..... ...++++.|.++.+++.+..+ .++..+ .++.++++++.+
T Consensus 242 ~i~~~s~sK-~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 318 (417)
T 3g7q_A 242 IILCMSLSK-LGLPGSRCGIIIAND-KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQT 318 (417)
T ss_dssp EEEEEESGG-GTCTTSCCEEEECCH-HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHH
T ss_pred EEEEEechh-ccCCCcceEEEEeCH-HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHH
Confidence 999999999 678999999999954 44444443332 233678999999999998876 445444 777888888888
Q ss_pred HHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC-------CCeEEEEe
Q 043923 341 VSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE-------PGWFRVCF 409 (469)
Q Consensus 341 ~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~-------~~~iRi~~ 409 (469)
.+.|.+. ++.+..+.+|+|+|++++... .+..+++..+ .++||.+.||+.|+... ++++||++
T Consensus 319 ~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~ 392 (417)
T 3g7q_A 319 IAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP-----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNY 392 (417)
T ss_dssp HHHHHHHCCTTTCEEECCCBSSEEEEECTTCS-----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEES
T ss_pred HHHHHHhcccCCceeeCCCcceEEEEEcCCCC-----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEe
Confidence 8888764 578888899999999998511 1223566665 57799999999887543 57999999
Q ss_pred ecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 410 ANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 410 ~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+. +++++++++++|++++++..+
T Consensus 393 ~~-~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 393 VP-EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp CS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHHHHHHHHHHh
Confidence 96 999999999999999987654
No 73
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=2.9e-41 Score=337.45 Aligned_cols=315 Identities=23% Similarity=0.334 Sum_probs=265.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCC
Q 043923 79 LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGV 158 (469)
Q Consensus 79 ~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~ 158 (469)
...|++..|..+|++++|+++. .+++++|++|+|+++|+..++.+++++||.|+++.|+|..+...+... |+
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~-------~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 127 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT-------GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSL-GA 127 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS-------SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHT-TC
T ss_pred CcCCCCCCChHHHHHHHHHHhc-------cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CC
Confidence 3568888899999999999874 257899999999999999999999999999999999999998888877 99
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+++.+|++.+++|.+|++++++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~ 201 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE 201 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSS
T ss_pred EEEEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 99999998767888999999998864 889999999999999999999999999999999999999999998655
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccc--ccCcHHHHHHHHHHh
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLSALL 316 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 316 (469)
. ...+..+ ..+++++++|+||++|++|+|+||+++ ++.+.+.+...... .+.+.+.+.++..++
T Consensus 202 ~--~~~~~~~-----------~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (375)
T 3op7_A 202 L--DVPSIIE-----------VYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLAL 267 (375)
T ss_dssp S--CCCCHHH-----------HCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHH
T ss_pred c--CCCchhh-----------hcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHH
Confidence 4 2233332 236789999999999999999999999 55566655554433 235778888888888
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
... .+++++.++.++++++.+.+.|++. ++.+..+.+|+++|+.++... +..+++..+++++||.+.||.
T Consensus 268 ~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~ 338 (375)
T 3op7_A 268 AHY---QEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------PMEDFCLQLLQEHGVLLVPGN 338 (375)
T ss_dssp HTH---HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------CHHHHHHHHHHHHCEECEEGG
T ss_pred hcc---HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------CHHHHHHHHHHhCCEEEeChh
Confidence 752 5667888889999999999999986 778888888888888886422 234677888778899999999
Q ss_pred CCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 396 SCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 396 ~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.|+. ++++|++++. +++++++++++|++++++..+
T Consensus 339 ~~~~--~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 339 RFER--DGYVRLGFAC-EQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp GGTC--TTEEEECCCS-CHHHHHHHHHHHHHHHGGGC-
T ss_pred hhCC--CCeEEEEecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 8874 7899999985 679999999999999987765
No 74
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=5.1e-45 Score=367.15 Aligned_cols=354 Identities=17% Similarity=0.222 Sum_probs=283.4
Q ss_pred CCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 38 TGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 38 ~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.++|+|+.+.+.++ ++.+.+++.+... .....|++. ..+|++++++++.+.++ +++++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~~ 94 (392)
T 3b1d_A 31 PQLLPAWIADMDFEVMPEVKQAIHDYAE------------QLVYGYTYA--SDELLQAVLDWEKSEHQ--YSFDKEDIVF 94 (392)
Confidence 47899999998775 4556666655311 124567765 68999999999987665 3467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
|+|+++++..++.+++++||.|+++.|+|..+...+... |.+++.+|++ .+++|.+|++++++++++. ++++|
T Consensus 95 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v 168 (392)
T 3b1d_A 95 VEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN-NRKLVSNSLKEENGLFQIDFEQLENDIVEN-----DVKLY 168 (392)
Confidence 999999999999999999999999999999999888877 9999999985 3345888999999988631 67889
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++|++||++||+||+|.++.+++..+.++..+.++ ..+++++++|+||+||
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~~i~~~s~sK~~~ 241 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPD-------FKDFALVLSSATKTFN 241 (392)
Confidence 999999999999999999999999999999999999999887766544455444221 1478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c-CCc
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-A-GIS 350 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-g~~ 350 (469)
++|+|+||++++++.+.+.+...... ..+++++|.++.++|.+. .+++++.++.++++++.+.+.|++ + +++
T Consensus 242 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 242 IAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQEAPRLK 318 (392)
Confidence 99999999999766455544443322 245778888888888753 345788888999999999999987 4 888
Q ss_pred eecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 351 CLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 351 v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.++.+++++|++++... .+..++++.+++++||.+.||..|+...++++||+++. +++++++++++|+++++
T Consensus 319 ~~~~~~~~~~~i~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 319 VMKPQGTYLIWLDFSDYG-----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 888999999999987420 11235667776678999999999976567899999985 78999999999998875
No 75
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.6e-41 Score=341.71 Aligned_cols=344 Identities=15% Similarity=0.207 Sum_probs=264.9
Q ss_pred CCeeeeecccc--c----cChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAEN--Q----LSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.++|||+.|.. + .+++.+.+++.+.... .....|++..|..+||+++|+++....+ ..+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 92 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLEN-----------ETTKNYLGIDGIPEFGRCTQELLFGKGS--ALIND 92 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHH-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCc-----------ccccCCCCCCCCHHHHHHHHHHHhcCCC--Ccccc
Confidence 46899999982 2 2346666666552100 1245788888999999999999964322 11358
Q ss_pred CcEEE--eCChHHHHHHHHHHh--cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVL--TAGATSANETLMFCL--AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~--t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++|++ |+|+++|+..++.++ +.+||.|+++.|+|..+...+... |.+++.+|++.++++.+|++++++++++.
T Consensus 93 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 169 (396)
T 2q7w_A 93 KRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNEA-- 169 (396)
T ss_dssp TCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTTC--
T ss_pred ccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHc-CCceEEEecccCCCCCcCHHHHHHHHHhC--
Confidence 89998 999999999998776 369999999999999999988887 99999999864456789999999988631
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC-CCccchhhhhhccccccCCcCCeEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS-PGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++ ....++..+.. ..+++++
T Consensus 170 -~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 240 (396)
T 2q7w_A 170 -QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAA--------MHKELIV 240 (396)
T ss_dssp -CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHH--------HCSCEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHh--------cCCcEEE
Confidence 1246788889999999999999999999999999999999999999866542 12233433322 2368999
Q ss_pred EccCccccCCCcceEEEEEe--cCH----HHHHHHHHh--cccccCcHHHHHHHHHHhcCc----hhhHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYS--NDD----MVVAAATKM--SSFGLVSSQTQYLLSALLSDK----KFTQNYISENKKRLK 334 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~--~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~l~ 334 (469)
++|+||+||++|+|+||+++ +++ .+...+... ..+..++++.|.++.++|++. .+ .+++++.++.++
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~-~~~~~~~~~~~~ 319 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIW-EQELTDMRQRIQ 319 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHH-HHHHHHC-CHHH
T ss_pred EEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHH-HHHHHHHHHHHH
Confidence 99999999999999999997 333 233333321 233345889999999999875 23 466788889999
Q ss_pred HHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 335 QRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 335 ~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
++++++.+.|++++ +++.++.+|+|+|+.++. +.+..+++++||.+.|| +||+++
T Consensus 320 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ris~~ 378 (396)
T 2q7w_A 320 RMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS----------GRVNVA 378 (396)
T ss_dssp HHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGG
T ss_pred HHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC----------ceEEEe
Confidence 99999999999986 788888889999987752 24566677789999874 699998
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 043923 411 NMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 411 ~~~~e~i~~~l~~L~~~l 428 (469)
..+++++++++++|++++
T Consensus 379 ~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 379 GMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp GCCTTTHHHHHHHHHHHC
T ss_pred ecCHHHHHHHHHHHHhcC
Confidence 668999999999998763
No 76
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7.3e-41 Score=342.31 Aligned_cols=368 Identities=20% Similarity=0.261 Sum_probs=272.7
Q ss_pred CCee-eeeccccccChH---HHHHHHhcCCCcc-ccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 38 TGII-QMGLAENQLSFD---LLESWLDRNPDAA-GFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 38 ~~~i-~L~~~~n~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
+++| +|+.+.+..+++ .+.+++.+..... -.+... ........|++..|.++||+++|+++++.++ +.++++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~ 107 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANS-SAIISMANYSNPQGDSAFIDALVGFFNRHYD--WNLTSE 107 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCC-HHHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGG
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccc-hhhhhhhccCCCCCCHHHHHHHHHHHHhhcC--CCCCHH
Confidence 4789 999998887653 3344443321000 000000 0001235699889999999999999988877 447899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCC--------------EEEEc-cCCCcChHHH------HhhhCCCEEEEeeccCC-C-
Q 043923 113 KIVLTAGATSANETLMFCLAEPGE--------------AFLLP-TPYYPGFDRD------LKWRTGVEIVPIQCTSL-N- 169 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd--------------~Vl~~-~P~y~~~~~~------~~~~~g~~~~~v~~~~~-~- 169 (469)
+|++|+|+++|+.+++.+++++|| .|+++ .|+|..|... +... |..++.++.+.+ +
T Consensus 108 ~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~ 186 (444)
T 3if2_A 108 NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAV-LPHIDEVTHDGEEGF 186 (444)
T ss_dssp GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEEC-CCEEEEEEETTEEEE
T ss_pred HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhcc-CceEEecccccccCc
Confidence 999999999999999999999988 78775 9999988763 3334 888888888742 2
Q ss_pred -CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 170 -GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 170 -~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
+|.+|++++++++... .+++++|++++|+||||.++|.+++++|+++|++||++||+||+|+.+ +....+....
T Consensus 187 ~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~- 261 (444)
T 3if2_A 187 FKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAH- 261 (444)
T ss_dssp EEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCC-
T ss_pred cccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc-cccccccccc-
Confidence 3679999999885421 237899999999999999999999999999999999999999999853 2211111110
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
. +..++++++.|+||+ +++|+|+||+++++. +.+.+..... .+.++++.|.++..++....+ .++.
T Consensus 262 --~-------~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~ 329 (444)
T 3if2_A 262 --L-------NWDNNTILCFSLSKI-GLPGMRTGIIVADAK-VIEAVSAMNAVVNLAPTRFGAAIATPLVANDRI-KQLS 329 (444)
T ss_dssp --C-------CCCTTEEEEEESTTT-TCGGGCCEEEECCHH-HHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH-HHHH
T ss_pred --c-------cCCCCEEEEechhhc-cCCCCceEEEEECHH-HHHHHHHHHHhccCCCChHHHHHHHHHHHcCch-hHHH
Confidence 1 134789999999997 789999999999544 4444433322 234678999999999998776 4444
Q ss_pred HH-HHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC
Q 043923 327 SE-NKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE 401 (469)
Q Consensus 327 ~~-~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~ 401 (469)
.+ .++.++++++.+.+.|.+. ++.+..+.+|+|+|+.++... .+..+++..+ .++||.+.||+.|....
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~g~~~~~~~ 403 (444)
T 3if2_A 330 DNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP-----ISTLDLYERL-KAKGTLIVPSEYFFPGV 403 (444)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS-----SCHHHHHHHH-HHTTEECEEGGGSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC-----CCHHHHHHHH-HHCCeEEecchhhcCCC
Confidence 44 6778888888888888763 567777888999999987411 1223566655 57799999999886431
Q ss_pred --------CCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 402 --------PGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 402 --------~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+++||+++. +++++++++++|++++++..+
T Consensus 404 ~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 404 DVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp CCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHHHc
Confidence 2689999997 999999999999999987654
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=6.2e-40 Score=326.19 Aligned_cols=332 Identities=18% Similarity=0.266 Sum_probs=257.4
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
..++|||+.|+|+++ ++.+.+++.+..... -.....|++. +..+||+++|++++ +++++|+
T Consensus 25 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~-~~~~lr~~la~~~g--------~~~~~i~ 86 (360)
T 3hdo_A 25 IASWIKLNTNENPYPPSPEVVKAILEELGPD---------GAALRIYPSA-SSQKLREVAGELYG--------FDPSWII 86 (360)
T ss_dssp CTTSEECSSCCCSSCCCHHHHHHHHHHHTTT---------CGGGGSCCCS-SCHHHHHHHHHHHT--------CCGGGEE
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHHhcc---------cchhhcCCCC-chHHHHHHHHHHhC--------cCcceEE
Confidence 357999999999986 466777766531100 0114568765 56999999999996 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++|+..++.+++++||.|+++.|+|.++...+... |++++.+|.+. ++.+ ++++++ .+++++
T Consensus 87 ~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~--~~l~~~--------~~~~~v 153 (360)
T 3hdo_A 87 MANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQ-GARVRTFGLTG--DFRI--AGFPER--------YEGKVF 153 (360)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHH-TCEEEEECBCT--TSSB--TTCCSS--------BCSSEE
T ss_pred EcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHC-CCEEEEeeCCC--CCCH--HHHHhh--------cCCCEE
Confidence 9999999999999999999999999999999999988888 99999999864 3444 333322 256789
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.++ +.++|+++|+++|+||+|+++ .+.. ...+.. ..+++++++|+||++|
T Consensus 154 ~i~~p~nptG~~~~~~~---l~~l~~~~~~~li~De~~~~~--~~~~---~~~~~~--------~~~~~i~~~s~sK~~g 217 (360)
T 3hdo_A 154 FLTTPNAPLGPSFPLEY---IDELARRCAGMLVLDETYAEF--AESN---ALELVR--------RHENVVVTRTLSKSYS 217 (360)
T ss_dssp EEESSCTTTCCCCCHHH---HHHHHHHBSSEEEEECTTGGG--SSCC---CTHHHH--------HCSSEEEEEESTTTTS
T ss_pred EEeCCCCCCCCCcCHHH---HHHHHHHCCCEEEEECChHhh--CCcc---hhHHhc--------cCCCEEEEecchHhhc
Confidence 99999999999999887 555667899999999999974 3332 222322 3478999999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||+++ ++.+.+.+......+..+.+.+.++.++|++.+ ++++.+++++++++++.+.|+++|+++.++.
T Consensus 218 ~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 292 (360)
T 3hdo_A 218 LAGMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQA----YLSECCRRIRETREWFTTELRSIGYDVIPSQ 292 (360)
T ss_dssp CTTSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHTTCEECCCS
T ss_pred CCccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEEcCCC
Confidence 99999999999 455656665555556689999999999998743 4788888999999999999999898887655
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+ .|+|+.++.. +..++.+.+ .++||.++|+.. ...++++||+++ +++++++++++|+++.+...+
T Consensus 293 ~-~~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~~--~~~~~~iRis~~--~~~e~~~l~~al~~~~~~~~~ 357 (360)
T 3hdo_A 293 G-NYLFATPPDR-------DGKRVYDGL-YARKVLVRHFSD--PLLAHGMRISIG--TREEMEQTLAALKEIGEGHHH 357 (360)
T ss_dssp S-SEEEEECTTC-------CHHHHHHHH-HHTTEECBCCCS--TTTTTSEEEECC--CHHHHHHHHHHHHHHHC----
T ss_pred c-cEEEEECCCC-------CHHHHHHHH-HHCCEEEEECCC--CCCCCEEEEEcC--CHHHHHHHHHHHHHHhccccc
Confidence 5 6888887631 123556555 467999999875 234689999998 799999999999988776555
No 78
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.6e-39 Score=324.42 Aligned_cols=334 Identities=18% Similarity=0.226 Sum_probs=263.7
Q ss_pred eeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 40 IIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 40 ~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
.|||+.|+|+++ ++.+.+++.+..... ......|++..+ .+|++++|+++++.++ +++++++|++|+
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~~-~~l~~~la~~l~~~~g--~~~~~~~v~~~~ 99 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKI---------ATELNRYPERDA-VELRDELAAYITKQTG--VAVTRDNLWAAN 99 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHH---------GGGTTSCCCTTC-HHHHHHHHHHHHHHHC--CCCCGGGEEEES
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhc---------ccccccCCCccH-HHHHHHHHHhhhhccc--CCCChHhEEECC
Confidence 399999999875 456666665531100 012457877666 8999999999988776 336789999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~ 198 (469)
|+++++..++.+++++||.|+++.|+|..+...+... |.+++.+|.+ .+|.+|++++++++++. ++++|+++
T Consensus 100 G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~ 171 (369)
T 3cq5_A 100 GSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGT-HTEFIAVSRG--ADFRIDMDVALEEIRAK-----QPDIVFVT 171 (369)
T ss_dssp HHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHT-TCEEEEEECC--TTSSCCHHHHHHHHHHH-----CCSEEEEE
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCC--cCCCCCHHHHHHHhhcc-----CCCEEEEe
Confidence 9999999999999999999999999999999888877 9999999976 45778999999998752 67899999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC-eEEEEccCccccCCC
Q 043923 199 NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN-RVHIVYSLSKDLGLP 277 (469)
Q Consensus 199 ~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~i~i~S~SK~~g~~ 277 (469)
+|+||||.+++.+++.++++ .+++++|+||+|+++.++ .+...+.+ ..+ ++++++|+||++|++
T Consensus 172 ~~~nptG~~~~~~~l~~l~~---~~~~~li~De~~~~~~~~----~~~~~~~~--------~~~~~~i~~~s~sK~~~~~ 236 (369)
T 3cq5_A 172 TPNNPTGDVTSLDDVERIIN---VAPGIVIVDEAYAEFSPS----PSATTLLE--------KYPTKLVVSRTMSKAFDFA 236 (369)
T ss_dssp SSCTTTCCCCCHHHHHHHHH---HCSSEEEEECTTGGGCCS----CCGGGGTT--------TCTTTEEEEEESSSTTSCG
T ss_pred CCCCCCCCCCCHHHHHHHHH---hCCCEEEEECCchhhcCC----cchHHHHh--------hCCCCEEEEEechHhcCCc
Confidence 99999999999888666666 556999999999975432 23333322 335 889999999999999
Q ss_pred cceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce
Q 043923 278 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG 357 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g 357 (469)
|+|+||++++++ +.+.+......+.++.+.+.++.+++.+. +++++.+++++++++++.+.|++.|+++.++. |
T Consensus 237 G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~ 310 (369)
T 3cq5_A 237 GGRLGYFVANPA-FIDAVMLVRLPYHLSALSQAAAIVALRHS----ADTLGTVEKLSVERVRVAARLEELGYAVVPSE-S 310 (369)
T ss_dssp GGCCEEEEECTH-HHHHHHTTSCTTCSCHHHHHHHHHHHHTH----HHHHTHHHHHHHHHHHHHHHHHHHTCEEECCS-S
T ss_pred ccceEEEEeCHH-HHHHHHHcCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEECCCC-C
Confidence 999999999755 44555544444558889999999998764 34677888899999999999998898887554 5
Q ss_pred EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 358 LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 358 ~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+|+|++++. +..++.+.+ .++||.+.||. .++++|++++ +++++++++++|+++++.
T Consensus 311 ~~~~~~~~~--------~~~~l~~~l-~~~gi~v~~~~-----~~~~iRis~~--~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 311 NFVFFGDFS--------DQHAAWQAF-LDRGVLIRDVG-----IAGHLRTTIG--VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp SEEEEECCS--------SHHHHHHHH-HHTTEECBCCS-----CTTEEEEECC--CHHHHHHHHHHHHHHHTT
T ss_pred eEEEEECCC--------CHHHHHHHH-HHCCEEEEECC-----CCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 788998861 123466665 47799999981 2578999998 799999999999998753
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=3.5e-41 Score=339.16 Aligned_cols=344 Identities=18% Similarity=0.224 Sum_probs=249.9
Q ss_pred hhhcCCCCCCCCCCCeeeeeccccccChH-HHHHHHhcCCCccccccCCcccccccccCCCCCCc-----HHHHHHHHHH
Q 043923 25 EYEKNPYDEVQNPTGIIQMGLAENQLSFD-LLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGL-----PAFKKALVEF 98 (469)
Q Consensus 25 ~~~~~~~~~~~~~~~~i~L~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~-----~~Lr~aia~~ 98 (469)
++..-|........++|+|+.+.+.++++ .+.+++.+.... ........|++..|. ++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~ 80 (391)
T 3bwn_A 9 KPEKISNKNIPMSDFVVNLDHGDPTAYEEYWRKMGDRCTVTI--------RGCDLMSYFSDMTNLCWFLEPELEDAIKDL 80 (391)
T ss_dssp ---------CCTTTSCEECSSCCCGGGHHHHHHTGGGSCEEE--------CTTTTCSSCSCTTSSSTTSCHHHHHHHHHH
T ss_pred CccccCCCCccCCCCeeEcCCCCCCCCCCHHHHHhHHHHhhc--------CccchhhcCCCCCCcccccCHHHHHHHHHH
Confidence 33333433333556789999999887643 344443221000 000134579999998 9999999999
Q ss_pred HHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCC----EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCccc
Q 043923 99 MSEIRGNKVTFDT-SKIVLTAGATSANETLMFCLAEPGE----AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQI 173 (469)
Q Consensus 99 l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd----~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 173 (469)
++. ++ +.+.+ ++|++|+|+++++..++.+++++|| .|++++|+|..|...++.. |++++.++++.+ ++.
T Consensus 81 ~~~-~g--~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~d~~-~l~- 154 (391)
T 3bwn_A 81 HGV-VG--NAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYV-RSGMYKWEGDAW-GFD- 154 (391)
T ss_dssp HHH-HC--SBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTT-CBTTEEEEEEST-TCC-
T ss_pred HHh-cC--CCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHc-CCeEEEecCCHH-HcC-
Confidence 984 44 44566 6999999999999999999999999 9999999999999998887 999999888742 222
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcc
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDR 253 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~ 253 (469)
. +++++|+++|||||||.+++ +|++.++.++++||+||+|.+ . ...++. .
T Consensus 155 ------~---------~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~--~~~~l~-~---- 204 (391)
T 3bwn_A 155 ------K---------KGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---P--HYTPIT-R---- 204 (391)
T ss_dssp ------C---------CSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---T--TTSCCC-C----
T ss_pred ------C---------CCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---C--CCCccc-c----
Confidence 0 27899999999999999997 344422223399999999972 1 111211 1
Q ss_pred ccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHHHHHhcCch-h------hHH
Q 043923 254 NCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLLSALLSDKK-F------TQN 324 (469)
Q Consensus 254 ~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~-~------~~~ 324 (469)
..+++++++||||+||++|+|+||++++++.+.+.+..... .++++.+.|.++..+|++.. + ..+
T Consensus 205 ------~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 278 (391)
T 3bwn_A 205 ------RQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESEN 278 (391)
T ss_dssp ------CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTS
T ss_pred ------CCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHH
Confidence 23789999999999999999999999844455555544433 35588999999999997642 0 145
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCceecC-------------CceEEEEEecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 325 YISENKKRLKQRHRKLVSGLEKA-GISCLKS-------------NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~-------------~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
++++.++.++++++.+.+.|+++ ++++..+ .+|+|+|++++.. +.+..+++++||.
T Consensus 279 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----------~~~~~~l~~~gV~ 348 (391)
T 3bwn_A 279 FFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----------TDLVSELRRHKVM 348 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----------CCHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH----------HHHHHHHHHCCEE
Confidence 68889999999999999999987 5555433 4556999998741 1345567788999
Q ss_pred EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 391 ISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 391 v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
++||+.|+. .++++|||++. +++++++++++|++++++
T Consensus 349 v~pg~~fg~-~~~~iRis~~~-~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 349 SRAGERCGS-DKKHVRVSMLS-REDVFNVFLERLANMKLI 386 (391)
T ss_dssp CEEGGGGTC-CTTEEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred EccCCCCCC-CCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 999999975 56899999996 899999999999988754
No 80
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1e-40 Score=335.75 Aligned_cols=341 Identities=15% Similarity=0.187 Sum_probs=263.3
Q ss_pred CCeeeeecccc--c----cChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAEN--Q----LSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
.++|||+.|.. + .+++.+.+++.+.... .....|++..|..+||+++|+++... .+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~-----~~~~ 89 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET-----------ETTKTYAGLSGEPEFQKAMGELILGD-----GLKS 89 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH-----------CCCCCCCCSSCCHHHHHHHHHHHHGG-----GCCG
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCC-----------cccCCCCCCCCcHHHHHHHHHHHhCC-----CCCc
Confidence 46899999983 1 3346677776653100 13457888889999999999998421 1368
Q ss_pred CcEEE--eCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVL--TAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~--t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++|++ |+|+++|+..++.++.. +||.|+++.|+|..+...+... |.+++.+|++.++++.+|++++++++++.
T Consensus 90 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 166 (394)
T 2ay1_A 90 ETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFM-GLPVQTYRYFDAETRGVDFEGMKADLAAA-- 166 (394)
T ss_dssp GGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHH-TCCEEEEECEETTTTEECHHHHHHHHHTC--
T ss_pred ccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCceEEEecccccCCccCHHHHHHHHHhC--
Confidence 89999 99999999999988754 9999999999999999988887 99999999864456789999999988641
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC-CccchhhhhhccccccCCcCCeEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP-GFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++. ...++..+.. ..+++++
T Consensus 167 -~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 237 (394)
T 2ay1_A 167 -KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIAS--------RIPEVLI 237 (394)
T ss_dssp -CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHH--------HCSSEEE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhh--------cCCCEEE
Confidence 12467778899999999999999999999999999999999999998655421 1223333322 2367899
Q ss_pred EccCccccCCCcceEEEEEe--cCHHH----HHHHHH--hcccccCcHHHHHHHHHHhcCch---hhHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYS--NDDMV----VAAATK--MSSFGLVSSQTQYLLSALLSDKK---FTQNYISENKKRLKQ 335 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~--~~~~~----~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~l~~ 335 (469)
++|+||++|++|+|+||+++ +++.+ ...+.. ...+..++++.|.++.++|++.. ...+++++.++++++
T Consensus 238 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 317 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLR 317 (394)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 43332 222221 12333358889999999998752 114568888999999
Q ss_pred HHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec
Q 043923 336 RHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN 411 (469)
Q Consensus 336 ~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~ 411 (469)
+++++.+.|++++ +++.++.+|+|+|++++. +.+..+++++||.+.|| +|++++.
T Consensus 318 ~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gi~v~~~----------~Ris~~~ 376 (394)
T 2ay1_A 318 LREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-----------EQVKRIKEEFGIYMVGD----------SRINIAG 376 (394)
T ss_dssp HHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGG
T ss_pred HHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEeec
Confidence 9999999998875 787788888999998752 23566677789999874 5999986
Q ss_pred CCHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~ 427 (469)
.+++++++++++|+++
T Consensus 377 ~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 377 LNDNTIPILARAIIEV 392 (394)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHc
Confidence 6899999999999875
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.9e-39 Score=318.23 Aligned_cols=316 Identities=18% Similarity=0.284 Sum_probs=249.6
Q ss_pred CCCeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 37 PTGIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
+.++|+|+.|+++++ ++.+.+++.+.... .....|+.. +..++|+++|+++++. .+++++|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~la~~~~~~-----~~~~~~v~ 80 (335)
T 1uu1_A 18 KRDKTYLALNENPFPFPEDLVDEVFRRLNS-----------DALRIYYDS-PDEELIEKILSYLDTD-----FLSKNNVS 80 (335)
T ss_dssp CCCSEEESSCCCSSCCCHHHHHHHHHTCCG-----------GGGGSCCCS-SCHHHHHHHHHHHTCS-----SCCGGGEE
T ss_pred CCcceECCCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCCC-chHHHHHHHHHHcCCC-----CCCHHHEE
Confidence 357899999999874 56677777764211 234568754 6899999999999743 25688999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+|+++++..++.++ ||.|+++ |+|..+...++.. |++++.+|++ .+|.+|++++ + ++++|
T Consensus 81 ~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l-----~------~~~~v 142 (335)
T 1uu1_A 81 VGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAKAV-GAKFLEVPLT--KDLRIPEVNV-----G------EGDVV 142 (335)
T ss_dssp EESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHHHH-TCEEEECCCC--TTSCCCCCCC-----C------TTEEE
T ss_pred EcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHHHc-CCeEEEeccC--CCCCCCHHHc-----C------CCCEE
Confidence 9999999999999988 8999999 9999999888887 9999999986 3466777776 1 78999
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++.+++++|+++| | ++|+||+|+++.+ . +...... ..+++++++|+||+||
T Consensus 143 ~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~--~---~~~~~~~--------~~~~~i~~~s~sK~~g 205 (335)
T 1uu1_A 143 FIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHG--E---SYVDFLK--------KYENLAVIRTFSKAFS 205 (335)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHC--C---CCGGGGG--------TCSSEEEEEESTTTTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcc--h---hHHHHhh--------hCCCEEEEecchhhcC
Confidence 9999999999999999988888877 7 8999999997532 2 2222222 3468899999999999
Q ss_pred CCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN 355 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~ 355 (469)
++|+|+||++++ +.+.+.+......++++.+.|.++.++|++. +++++.+++++++++++.+.|+++|+++.++
T Consensus 206 ~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~- 279 (335)
T 1uu1_A 206 LAAQRVGYVVAS-EKFIDAYNRVRLPFNVSYVSQMFAKVALDHR----EIFEERTKFIVEERERMKSALREMGYRITDS- 279 (335)
T ss_dssp CGGGCCEEEEEC-HHHHHHHHHHSCTTCSCHHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-
T ss_pred CcccCeEEEEeC-HHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC-
Confidence 999999999994 5555555555545568899999999999874 3467788888999999999999888876554
Q ss_pred ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAF 427 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~ 427 (469)
+|+|+|++++. .+..++++.++ ++||.+.|+ ++++|++++ +++++++++++|+++
T Consensus 280 ~~~~~~~~~~~-------~~~~~~~~~l~-~~gi~v~~~-------~~~iRis~~--~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 280 RGNFVFVFMEK-------EEKERLLEHLR-TKNVAVRSF-------REGVRITIG--KREENDMILRELEVF 334 (335)
T ss_dssp CSSEEEEECCT-------HHHHHHHHHHH-HHTEEEEEE-------TTEEEEECC--CHHHHHHHHHHHHCC
T ss_pred CCeEEEEECCC-------CCHHHHHHHHH-HCCEEEEEC-------CCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 56789999874 12335667666 569999982 468999997 578899999998754
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=9.9e-36 Score=299.80 Aligned_cols=344 Identities=13% Similarity=0.064 Sum_probs=256.7
Q ss_pred CCCeeeeecccc-cc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 37 PTGIIQMGLAEN-QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
..++|||+.|++ .+ +++.+.+++.+.... .......|++..|..++++++++++.+.++ .+++
T Consensus 42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~---------~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~~v 106 (398)
T 3a2b_A 42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEK---------YGTGCAGSRFLNGTLDIHVELEEKLSAYVG------KEAA 106 (398)
T ss_dssp TEEEEECSCSCTTCGGGCHHHHHHHHHHHHH---------HCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CSEE
T ss_pred CceEEEeecccccCCCCCHHHHHHHHHHHHH---------cCCCCCCcCcccCCcHHHHHHHHHHHHHhC------CCcE
Confidence 456899999987 54 455666665542110 001123466667878999999999888765 3689
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.+|. +|++++++++++.. ..++++
T Consensus 107 ~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~-g~~~~~v~~-------~d~~~l~~~l~~~~--~~~~~~ 176 (398)
T 3a2b_A 107 ILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLS-FSKVIKYGH-------NNMEDLRAKLSRLP--EDSAKL 176 (398)
T ss_dssp EEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHS-SSEEEEECT-------TCHHHHHHHHHTSC--SSSCEE
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHc-CCceEEeCC-------CCHHHHHHHHHhhc--cCCceE
Confidence 99999999999999999999999999999999999888877 999999985 47899998886421 116889
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCe-EEEEccCccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNR-VHIVYSLSKD 273 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~i~i~S~SK~ 273 (469)
|++++|+||||.+++ +++|+++|++||+++|+||+|+.+.++.. ..++.+... ..++ +++++|+||+
T Consensus 177 v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--------~~~~~di~~~s~sK~ 244 (398)
T 3a2b_A 177 ICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHK-GAGTASHFG--------LNDDVDLIMGTFSKS 244 (398)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG-GCCHHHHHT--------CGGGCSEEEEESSST
T ss_pred EEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCCC-CCchHhhcC--------CCcCCeEEEeccccc
Confidence 999999999999998 56689999999999999999987655321 123333321 2234 6999999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHh-c--ccccCcHHHHH-HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKM-S--SFGLVSSQTQY-LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~-~--~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
+|++| ||++++++ +.+.+... . .....+++.|. ++.++|+.. +++++.+++++++++++.+.|+++|+
T Consensus 245 ~~~~G---G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~ 316 (398)
T 3a2b_A 245 LASLG---GFVAGDAD-VIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLLDHGF 316 (398)
T ss_dssp TCSSC---EEEEECHH-HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCC---cEEEeCHH-HHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99778 99999644 44444332 2 22234555565 455666542 23567788899999999999999898
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
++.++. |+|+|+.++.. .+..+++..++++ ||.+.||..|... .++++||+++. .+++++++++++|+++
T Consensus 317 ~~~~~~-g~~~~~~~~~~------~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 317 DLGATE-SPILPIFIRSN------EKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp CBCSCC-SSEEEEECCCH------HHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CcCCCC-CCEEEEEcCCH------HHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 887766 58999998742 2334677777755 9999999888642 35799999986 4999999999999999
Q ss_pred HHhhcc
Q 043923 428 VDSITT 433 (469)
Q Consensus 428 l~~~~~ 433 (469)
+++..-
T Consensus 389 l~~~~~ 394 (398)
T 3a2b_A 389 FKQAEV 394 (398)
T ss_dssp HHHCC-
T ss_pred HHHhCc
Confidence 976543
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.1e-33 Score=284.44 Aligned_cols=344 Identities=13% Similarity=0.082 Sum_probs=244.0
Q ss_pred CCCeeeeeccccccC---hHHHHHHHhcCCCccccccCCccccccccc--CCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAENQLS---FDLLESWLDRNPDAAGFKRDGQSIFRELAL--FQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
...+|||+.+ ++++ ++.+.+++.+....... ...... |+...+..+|++.++++++ . +
T Consensus 42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~-------~~~~~~~~~g~~~~~~~l~~~la~~~~--------~-~ 104 (399)
T 3tqx_A 42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGF-------GMASVRFICGTQTIHKELEKDISEFLG--------T-D 104 (399)
T ss_dssp TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCS-------CCCSCCCCCCCBHHHHHHHHHHHHHHT--------C-S
T ss_pred CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCC-------CCCCcCccccCchHHHHHHHHHHHHHC--------C-C
Confidence 3468999999 4433 35555555442110000 000111 2233346889999998885 2 3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+.|++++| ++++..++.+++++||.|+++.|+|..+...+... |.+++.+|. .|++++++.+++....+.+
T Consensus 105 ~~i~~~sG-t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 175 (399)
T 3tqx_A 105 DTILYSSC-FDANGGLFETLLGPEDAIISDELNHASIIDGIRLC-KAQRYRYKN-------NAMGDLEAKLKEADEKGAR 175 (399)
T ss_dssp EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSC-CSEEEEECT-------TCTTHHHHHHHHHHTTTCS
T ss_pred cEEEECch-HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCceeEeCC-------CCHHHHHHHHHhhhccCCC
Confidence 56666655 77999999999999999999999999999988877 999999985 3678899988765433347
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++|++++|+||||.+++ +++|+++|++||+++|+||+|+...++.. ..+..+...- ..+.+++++|+|
T Consensus 176 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-------~~~~di~~~s~s 244 (399)
T 3tqx_A 176 FKLIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGEN-GRGTPEYCGV-------ADRVDILTGTLG 244 (399)
T ss_dssp SEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT-SCCHHHHHTC-------TTCCSEEEEESS
T ss_pred ceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCC-------CCCCcEEEecch
Confidence 899999999999999999 66799999999999999999963323322 2233333210 125578999999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHh-ccc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKM-SSF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|++| |++.||+++++.. .+.+... ..+ +..+.+.+.++.+.++.. .++.++.+++++++++++.+.|+++
T Consensus 245 K~~~--g~~gG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 245 KALG--GASGGYTSGHKEI-IEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp SSSC--SSCCEEEEECHHH-HHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhcc--cCceEEEEcCHHH-HHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHc
Confidence 9998 3344999996554 4444332 222 235666666666666432 2446788899999999999999999
Q ss_pred CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHH
Q 043923 348 GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLK 425 (469)
Q Consensus 348 g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~ 425 (469)
|+++.++.+ .|+|+.++.. .+..+++..+++ +||.+.|+..+. ..+++++|++++. .+++++++++++|+
T Consensus 319 g~~~~~~~~-~~~~~~~~~~------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 390 (399)
T 3tqx_A 319 GFQLVPGNH-PIIPVMLGDA------QLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFG 390 (399)
T ss_dssp TCCBCCCSS-SEEEEEEECH------HHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCcCCCCC-CEEEEEeCCH------HHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHH
Confidence 998876655 6788888642 233467777765 699999876544 3345799999974 59999999999999
Q ss_pred HHHHhh
Q 043923 426 AFVDSI 431 (469)
Q Consensus 426 ~~l~~~ 431 (469)
+++++.
T Consensus 391 ~~~~~~ 396 (399)
T 3tqx_A 391 QVGKKL 396 (399)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999865
No 84
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=9.7e-34 Score=283.12 Aligned_cols=341 Identities=13% Similarity=0.105 Sum_probs=242.2
Q ss_pred eeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCCh
Q 043923 41 IQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA 120 (469)
Q Consensus 41 i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~ 120 (469)
+-|+.+.+..+++.+.+++.+........+. ......|....+..+|+++++++++ +++++|++|+|+
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~ 70 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPN----SAHGMGIEANLHMEKAREKVAKVLG--------VSPSEIFFTSCA 70 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTT----CSSHHHHHHHHHHHHHHHHHHHHHT--------SCGGGEEEESCH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCc----cccHHHHHHHHHHHHHHHHHHHHcC--------CCCCeEEEECCH
Confidence 5667776666666666666553110000000 0001113334567899999999985 567899999999
Q ss_pred HHHHHHHHHHhc----CCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 121 TSANETLMFCLA----EPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 121 ~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
++|+..++.++. ++||.|+++.|+|+.+...+ ... |++++.+|.+. ++.+|++++++++++ +++
T Consensus 71 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~ 141 (384)
T 1eg5_A 71 TESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMK-GFKVKYVPVDS--RGVVKLEELEKLVDE------DTF 141 (384)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHT-TCEEEECCBCT--TSCBCHHHHHHHCCT------TEE
T ss_pred HHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhc-CCEEEEEccCC--CCccCHHHHHHHhCC------CCe
Confidence 999999999997 79999999999999886655 555 99999999873 467899999988864 789
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcC--eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKN--IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~--~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+|++++|+||||.+++. ++|.++|++|| ++||+||+|+ |+... .++. ..+.++++.|+|
T Consensus 142 ~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~li~Dea~~---~~~~~-~~~~------------~~~~di~~~s~s 202 (384)
T 1eg5_A 142 LVSIMAANNEVGTIQPV---EDVTRIVKKKNKETLVHVDAVQT---IGKIP-FSLE------------KLEVDYASFSAH 202 (384)
T ss_dssp EEEEESBCTTTCBBCCH---HHHHHHHHHHCTTCEEEEECTTT---TTTSC-CCCT------------TTCCSEEEEEGG
T ss_pred EEEEECCCCCcccccCH---HHHHHHHHhcCCceEEEEEhhhh---cCCcc-cCch------------hcCCCEEEecHH
Confidence 99999999999999994 56888899999 9999999997 43321 1211 124678899999
Q ss_pred cccCCCcceEEEEEecCHH-HHHHHHH-----hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 272 KDLGLPGFRVGAIYSNDDM-VVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~-~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
|.+|++| +||++++++. +...+.. ....++.+.+.+.++.++|+.. .+++++.+++++++++++.+.|+
T Consensus 203 K~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~ 277 (384)
T 1eg5_A 203 KFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA---VEELSEAAKHMEKLRSKLVSGLM 277 (384)
T ss_dssp GGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHhC
Confidence 9999888 7999997653 1211111 0123457788888887777652 34577888899999999999999
Q ss_pred hcCCceecCC---ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-----------------CCCeE
Q 043923 346 KAGISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-----------------EPGWF 405 (469)
Q Consensus 346 ~~g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-----------------~~~~i 405 (469)
+.|+++..+. .+.++++.+++. +..++.+.| .++||.+.+|..|+.. .++++
T Consensus 278 ~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 349 (384)
T 1eg5_A 278 NLGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAI 349 (384)
T ss_dssp TTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEE
T ss_pred CCCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeE
Confidence 8888876543 124666766531 123566655 5779999999877532 13689
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 406 RVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 406 Ri~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
||+++. .+++++++++++|++++++.+++
T Consensus 350 Ri~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 379 (384)
T 1eg5_A 350 RISLCKYNTEEEVDYFLKKIEEILSFLDLT 379 (384)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999985 48999999999999999887663
No 85
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=2.5e-33 Score=282.38 Aligned_cols=341 Identities=13% Similarity=0.076 Sum_probs=243.7
Q ss_pred CCCeeeeeccccccC---hHHHHHHHhcCCCccccccCCcccccccccCC--CCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAENQLS---FDLLESWLDRNPDAAGFKRDGQSIFRELALFQ--DYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
...+|||+.+ ++++ ++.+.+++.+..... + .......|+ ...+..+|++++|++++ ++
T Consensus 44 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~-----~--~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~- 106 (401)
T 1fc4_A 44 GSHVINFCAN-NYLGLANHPDLIAAAKAGMDSH-----G--FGMASVRFICGTQDSHKELEQKLAAFLG--------ME- 106 (401)
T ss_dssp SCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHH-----C--SCCCSCHHHHCCBHHHHHHHHHHHHHHT--------CS-
T ss_pred CccEEEeecc-CcccccCCHHHHHHHHHHHHHh-----C--CCCCCCCcccCCcHHHHHHHHHHHHHhC--------CC-
Confidence 4568999998 5563 466666665521100 0 000011232 24567899999999985 33
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+.|++++| ++++..++.+++++||.|+++.|+|..+...+... |++++.++. .|++++++.+++....+.+
T Consensus 107 ~~i~~~sG-s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 177 (401)
T 1fc4_A 107 DAILYSSC-FDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYAN-------NDMQELEARLKEAREAGAR 177 (401)
T ss_dssp EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTS-CSEEEEECT-------TCHHHHHHHHHHHHHTTCS
T ss_pred cEEEeCCh-HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHc-CCceEEECC-------CCHHHHHHHHHHhhccCCC
Confidence 56666655 66888899999999999999999998888877776 999998873 3788999988754322226
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-cccc-CCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVF-SSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+++|++++|+||||.+++ +++|.++|++||+++|+||+|+ ++.+ .+....+...+ ..+.+++++|
T Consensus 178 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~----------~~~~di~~~s 244 (401)
T 1fc4_A 178 HVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV----------MGRVDIITGT 244 (401)
T ss_dssp SEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC----------TTCCSEEEEE
T ss_pred ceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC----------CcCCcEEEec
Confidence 889999999999999999 6678999999999999999995 6532 22221111222 2245788999
Q ss_pred Ccccc-CCCcceEEEEEecCHHHHHHHHHhc-c---cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043923 270 LSKDL-GLPGFRVGAIYSNDDMVVAAATKMS-S---FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGL 344 (469)
Q Consensus 270 ~SK~~-g~~GlRiG~li~~~~~~~~~~~~~~-~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L 344 (469)
+||++ |.+| ||++++ +.+.+.+.... . ....+.+.+.++.+.++.... .++.+++++++++++.+.|
T Consensus 245 ~sK~~~~~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L 316 (401)
T 1fc4_A 245 LGKALGGASG---GYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA----GSELRDRLWANARQFREQM 316 (401)
T ss_dssp SSSTTCSSSC---EEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhccCCCC---EEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHH
Confidence 99999 5554 999995 44444444322 1 124677888888777754221 3567788888999999999
Q ss_pred HhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHH
Q 043923 345 EKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MSEDTLKLSMQ 422 (469)
Q Consensus 345 ~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~-~~~e~i~~~l~ 422 (469)
+++|+++.+ ..|+|+|++++.. .+..++++.+. ++||.+.+|..|+.. ..+++||+++. .++++++++++
T Consensus 317 ~~~g~~~~~-~~~~~~~~~~~~~------~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 388 (401)
T 1fc4_A 317 SAAGFTLAG-ADHAIIPVMLGDA------VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVE 388 (401)
T ss_dssp HHTTCCBCC-SSSSEEEEEEECH------HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHH
T ss_pred HHcCCcccC-CCCCEEEEEcCCh------HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 998888774 4568889988642 22345666666 559999999877643 35689999985 49999999999
Q ss_pred HHHHHHHhhc
Q 043923 423 RLKAFVDSIT 432 (469)
Q Consensus 423 ~L~~~l~~~~ 432 (469)
+|++++++..
T Consensus 389 ~l~~~~~~~~ 398 (401)
T 1fc4_A 389 AFTRIGKQLG 398 (401)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 9999988653
No 86
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.4e-33 Score=279.77 Aligned_cols=299 Identities=13% Similarity=0.151 Sum_probs=232.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTS-KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
..++++++++++.+.++ ++++ +|++|+|+++|+..++.+++++||.|+++.|+|.. +...+... |++++.+|
T Consensus 65 ~~~~~~~~~~~la~~~g----~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 139 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQ----TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRY-GADVRTIS 139 (393)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHc-CCceEEEe
Confidence 46788888888887766 5677 89999999999999999999999999999999998 88777777 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+. ++.+|++++++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+ ++..+ .
T Consensus 140 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~---~g~~~-~ 205 (393)
T 1vjo_A 140 KPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS---LGGVP-I 205 (393)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT---TTTSC-C
T ss_pred cCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc---ccCcC-C
Confidence 874 4678999999998753 6789999999999999998 5568889999999999999998 43221 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh---------------------cccc-
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM---------------------SSFG- 302 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~---------------------~~~~- 302 (469)
.+. ..+.++++.|+||+++.+| |+||++++++.+ +.+... ...+
T Consensus 206 ~~~------------~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (393)
T 1vjo_A 206 FLD------------AWGVDLAYSCSQKGLGCSP-GASPFTMSSRAI-EKLQRRRTKVANWYLDMNLLGKYWGSERVYHH 271 (393)
T ss_dssp CTT------------TTTCSEEECCSSSTTCSCS-SCEEEEECHHHH-HHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCS
T ss_pred ccc------------ccCccEEEEcCcccccCCC-ceEEEEECHHHH-HHHhccCCCCCceecCcHhhhhhhccCCCCCC
Confidence 211 2356788999999998777 999999965543 333211 1112
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecccccccCChhHHHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
+.+.+.+.++.++++... ..++++.+++++++++++.+.|+++|+++..+.+ +.++++.++... +..++
T Consensus 272 ~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 343 (393)
T 1vjo_A 272 TAPINLYYALREALRLIA--QEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGV------DGKAV 343 (393)
T ss_dssp CCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTC------CHHHH
T ss_pred CCCHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCC------CHHHH
Confidence 567788888888776421 3346778889999999999999988888877654 357788876321 23356
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~-~~~e~i~~~l~~L~~~l~ 429 (469)
++.+++++||.+.||..|. .++++||++ +. .+++++++++++|+++++
T Consensus 344 ~~~l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 344 ARRLLNEHNIEVGGGLGEL--AGKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp HHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCEEEecCcccc--CCCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 7777765699999998764 367999995 32 367789999999998863
No 87
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.5e-32 Score=273.15 Aligned_cols=301 Identities=13% Similarity=0.154 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHhHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeec
Q 043923 89 PAFKKALVEFMSEIRGNKVTFD-TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~ 165 (469)
.++++++++++.+.+| ++ ++++++|+|+++|+..++.+++++||.|+++.|+|.+ +...+... |++++.++.
T Consensus 52 ~~~~~~~~~~la~~~g----~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 126 (386)
T 2dr1_A 52 RKVHMDTVERLREFLE----VEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESN-GRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHT----CSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhC----CCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHh-CCceEEEec
Confidence 6788888888877766 33 6789999999999999999999999999999999987 77777776 999999998
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVS 245 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s 245 (469)
+. ++.+|++++++++++ ++++++|++++|+||||.+.+ +++|+++|++||+++|+||+|+.+.+. .+
T Consensus 127 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~ 193 (386)
T 2dr1_A 127 EP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD----IK 193 (386)
T ss_dssp CT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC----CC
T ss_pred CC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc----cc
Confidence 74 567899999999863 237899999999999999988 566899999999999999999853221 12
Q ss_pred hhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH---------------HHH----hcccccCcH
Q 043923 246 IMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA---------------ATK----MSSFGLVSS 306 (469)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~---------------~~~----~~~~~~~s~ 306 (469)
+. ..+.++++.|+||+++.+ .++||++++++.+... ... ....++.+.
T Consensus 194 ~~------------~~~~di~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (386)
T 2dr1_A 194 FD------------KWGLDVVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPM 260 (386)
T ss_dssp TT------------TTTCSEEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCH
T ss_pred cc------------ccCCcEEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCH
Confidence 11 225678999999999855 2499999965543322 011 122345677
Q ss_pred HHHHHHHHHhcCchhhHHH--HHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccccCChhHHHHHHH
Q 043923 307 QTQYLLSALLSDKKFTQNY--ISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
+.+.++.++|+.. .+. +++.+++++++++++.+.|+++|+++..+. .++++|+.++... +..++++
T Consensus 261 ~~~~a~~~~l~~~---~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 331 (386)
T 2dr1_A 261 PQVFGINVALRII---EKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI------KGDEVYE 331 (386)
T ss_dssp HHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC------CHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC------CHHHHHH
Confidence 8888887777542 222 567788899999999999998888877664 3678899887321 2335677
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.|+++ ||.+.||..+. .++++||+++. .+++++++++++|++++++..
T Consensus 332 ~l~~~-gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 332 AMRKR-GFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp HHHHT-TEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 77655 99999998653 35799999986 599999999999999987654
No 88
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.2e-33 Score=282.06 Aligned_cols=342 Identities=14% Similarity=0.140 Sum_probs=243.4
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC--CCCcHHHHHHHHHHHHhHcCCCCCC-CCCcE
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD--YHGLPAFKKALVEFMSEIRGNKVTF-DTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~Lr~aia~~l~~~~~~~~~~-~~~~i 114 (469)
.++|+|+.+.+..+++.+.+++.+...... + ........|++ ..+..++++++|++++ . ++++|
T Consensus 27 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~----~-~~~~~~~~y~~~~~~~~~~l~~~la~~~~--------~~~~~~v 93 (420)
T 1t3i_A 27 HPLVYLDNAATSQKPRAVLEKLMHYYENDN----A-NVHRGAHQLSVRATDAYEAVRNKVAKFIN--------ARSPREI 93 (420)
T ss_dssp EECEECBTTTCCCCCHHHHHHHHHHHHHTC----C-CC--CCSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHhcc----C-CCCcccchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeE
Confidence 358999999888656666666655311000 0 00001233543 3567899999999986 3 57899
Q ss_pred EEeCChHHHHHHHHHHh----cCCCCEEEEccCCCcC----hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCL----AEPGEAFLLPTPYYPG----FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|+|+++|+..++.++ +++||.|+++.|+|.. +...+... |++++.++.+ .++.+|++++++++++
T Consensus 94 ~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~l~~-- 168 (420)
T 1t3i_A 94 VYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKT-GAVLKFVQLD--EQESFDLEHFKTLLSE-- 168 (420)
T ss_dssp EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHH-CCEEEEECBC--TTSSBCHHHHHHHCCT--
T ss_pred EEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhc-CcEEEEeccC--CCCCcCHHHHHHhhCC--
Confidence 99999999999999999 8999999999999998 44555566 9999999987 4567899999998864
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++++|+||||.+++ +++|.++|++||+++|+||+|+.. ... .++..+ +.+++
T Consensus 169 ----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~---~~~-~~~~~~------------~~di~ 225 (420)
T 1t3i_A 169 ----KTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAP---HYP-LDVQLI------------DCDWL 225 (420)
T ss_dssp ----TEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT---TSC-CCHHHH------------TCSEE
T ss_pred ----CceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccC---Ccc-Cchhhc------------CCCEE
Confidence 7899999999999999999 666899999999999999999842 111 122222 46788
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHhcc---------------------c-ccCcHHHHHHHHH-HhcCchhhH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS---------------------F-GLVSSQTQYLLSA-LLSDKKFTQ 323 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~---------------------~-~~~s~~~q~~~~~-~l~~~~~~~ 323 (469)
+.|+||.+|.+| +||+++++ .+.+.+..... + ...+.+.+.++.. +++... .
T Consensus 226 ~~s~sK~~~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~ 300 (420)
T 1t3i_A 226 VASGHKMCAPTG--IGFLYGKE-EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT--D 300 (420)
T ss_dssp EEEGGGTTSCTT--CEEEEECH-HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--H
T ss_pred EEehhhhcCCCc--eEEEEEch-HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH--H
Confidence 899999998777 99999964 44443332221 1 1234455554332 332211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC-----ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA-GISCLKSN-----AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC 397 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~-----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f 397 (469)
..+++.+++++++++++.+.|+++ |+++..+. .+.++++.++. . +..++.+ .+.++||.+.||..|
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~-~l~~~gi~v~~~~~~ 372 (420)
T 1t3i_A 301 LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG-L------HASDVAT-MVDQDGIAIRSGHHC 372 (420)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT-B------CHHHHHH-HHHTTTEECBCSCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECC-C------CHHHHHH-HHHHCCeEEeecccc
Confidence 135677788888999999999988 88887664 24455566753 1 1224554 456789999999655
Q ss_pred CC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 398 HC------TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 398 ~~------~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.. ..++++||+++. .+++++++++++|+++++..++
T Consensus 373 ~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 373 TQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred chHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 32 116789999986 4899999999999999987655
No 89
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=6.8e-33 Score=277.63 Aligned_cols=336 Identities=10% Similarity=0.089 Sum_probs=238.6
Q ss_pred CCCeeeeecccc-cc-ChHHHHHHHhcCCCccccccCCcccccccccC--CCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN-QL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALF--QDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+|||+.++| .+ +++.+.+++.+..... + .......| +...+..+|+++++++++ + ++
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~-----~--~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~-~~ 101 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQF-----G--IGSGGSGHVSGYSVVHQALEEELAEWLG--------Y-SR 101 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHH-----C--SCCCSBTTTTCCCHHHHHHHHHHHHHHT--------C-SE
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHh-----C--CCCCCcCcccCChHHHHHHHHHHHHHhC--------C-Cc
Confidence 446899999986 43 4455666655431100 0 00011233 334678899999999985 3 35
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.|++++| ++++..++.+++++||.|+++.|+|..+...+... |++++.+|. .|++++++.+++. .+++
T Consensus 102 ~i~~~sG-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~---~~~~ 169 (384)
T 1bs0_A 102 ALLFISG-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLS-PSQLRRFAH-------NDVTHLARLLASP---CPGQ 169 (384)
T ss_dssp EEEESCH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTS-SSEEEEECT-------TCHHHHHHHHHSC---CSSC
T ss_pred EEEeCCc-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHc-CCCEEEeCC-------CCHHHHHHHHHhc---CCCC
Confidence 5556555 89999999999999999999999999998888877 999999884 3788898888641 1137
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|++++|+||||.+++ +++|+++|++||++||+||+|+.+.++... .++..... .+..++++|+||
T Consensus 170 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~---------~~~di~~~s~sK 236 (384)
T 1bs0_A 170 QMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQG-RGSCWLQK---------VKPELLVVTFGK 236 (384)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGG-CCHHHHTT---------CCCSEEEEESSS
T ss_pred eEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCC-CchHHhcC---------CCCcEEEeeccc
Confidence 88899999999999999 566899999999999999999865433111 12222211 123488999999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHhc-cc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATKMS-SF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
++|.+| ||+++++ .+.+.+.... .+ ...+.+.+.++.++++... ..+.++.+++++++++++.+.|+++|
T Consensus 237 ~~~~~G---G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 237 GFGVSG---AAVLCSS-TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIR--SDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp TTSSCC---EEEEECH-HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred hhhccC---cEEEeCH-HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 999777 9999964 4444443321 22 1367777777777765322 00456778889999999999999988
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC-TEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
+++.+ ..++++|+.++.. .+..++++.+++ +||.+.||..|+. .+.+++||+++. .+++++++++++|++
T Consensus 311 ~~~~~-~~~~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 311 FTLAD-SCSAIQPLIVGDN------SRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp CEECS-CCSSBCCEEEESH------HHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CcccC-CCCCEEEEEeCCH------HHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 88775 4457778887632 223456777664 5999999987753 235799999985 389999999999987
Q ss_pred H
Q 043923 427 F 427 (469)
Q Consensus 427 ~ 427 (469)
+
T Consensus 383 ~ 383 (384)
T 1bs0_A 383 N 383 (384)
T ss_dssp H
T ss_pred h
Confidence 4
No 90
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=2.3e-32 Score=274.63 Aligned_cols=299 Identities=14% Similarity=0.150 Sum_probs=227.1
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTS-KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~~~~~v~ 164 (469)
..++++++|++++ .+++ +|++|+|+++++..++.+++++||.|+++.|+|..+. ..+... |++++.++
T Consensus 53 ~~~l~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 123 (396)
T 2ch1_A 53 MDEVKDGLRYIFQ--------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERY-GADVRTIE 123 (396)
T ss_dssp HHHHHHHHHHHHT--------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHc-CCceEEec
Confidence 6889999999986 4667 8999999999999999999999999999999999884 355666 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|+++|++||+||+|+ ++... .
T Consensus 124 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~---~g~~~-~ 189 (396)
T 2ch1_A 124 GPP--DRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVAS---LCGVP-F 189 (396)
T ss_dssp CCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTTBC-C
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEcccc---ccCCc-c
Confidence 874 5678999999998753 6889999999999999999 5568889999999999999998 33221 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-------------------------c
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-------------------------S 299 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-------------------------~ 299 (469)
.+. ..+..+++.|++|.++ ++.++|++++++. +.+.+... .
T Consensus 190 ~~~------------~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (396)
T 2ch1_A 190 YMD------------KWEIDAVYTGAQKVLG-APPGITPISISPK-ALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR 255 (396)
T ss_dssp CTT------------TTTCCEEECCCC-CCC-CCSSCEEEEECHH-HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC
T ss_pred chh------------hcCcCEEEEcCCcccc-CCCCeEEEEECHH-HHHhhhhccCcccceEechHHHHHhhhhhcccCC
Confidence 211 1234566789999875 4456699999654 33333211 0
Q ss_pred ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecccccccCChhH
Q 043923 300 SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLRSNTFEA 375 (469)
Q Consensus 300 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g----~~~~v~~~~~~~~~~~~~ 375 (469)
..++.+...+.++.+++.... .+++++.+++++++++++.+.|+++|+++.++.++ .++++.++... +
T Consensus 256 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~ 327 (396)
T 2ch1_A 256 YHHTVASNLIFALREALAQIA--EEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGV------D 327 (396)
T ss_dssp CCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTC------C
T ss_pred CCCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCC------C
Confidence 123456677777777775421 33467788889999999999999889888776653 47888886321 2
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++.+.|++++||.+++|..+. .++++||++ +. .+++++++++++|++++++.+.
T Consensus 328 ~~~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 328 WWKVSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp HHHHHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 33577777766799999987542 467999999 43 4899999999999999987654
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2.6e-32 Score=274.86 Aligned_cols=340 Identities=12% Similarity=0.110 Sum_probs=239.9
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCC-CCCcEEEe
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTF-DTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~-~~~~i~~t 117 (469)
++|.|+.+.+...++.+.+++.+........+ ........|.+..+..++++++|++++ . ++++|++|
T Consensus 23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~v~~~ 91 (406)
T 1kmj_A 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAV---HRGIHTLSAQATEKMENVRKRASLFIN--------ARSAEELVFV 91 (406)
T ss_dssp ECEECCTTTCCCCCHHHHHHHHHHHHHTCCCC---SSCSSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGEEEE
T ss_pred ceEEecCCccCCCCHHHHHHHHHHHHhhcCCC---CCCcchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeEEEe
Confidence 57999998887655666666654311000000 000000113344567899999999986 3 57899999
Q ss_pred CChHHHHHHHHHHh----cCCCCEEEEccCCCcChH----HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 118 AGATSANETLMFCL----AEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 118 ~G~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+|+++|+..++.++ +++||.|+++.|+|.+.. ..+... |++++.+|.+. ++.+|++++++++++
T Consensus 92 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~l~~----- 163 (406)
T 1kmj_A 92 RGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARV-GAELRVIPLNP--DGTLQLETLPTLFDE----- 163 (406)
T ss_dssp SSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHH-TCEEEEECBCT--TSCBCGGGHHHHCCT-----
T ss_pred CChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhC-CCEEEEEecCC--CCCcCHHHHHHHhcc-----
Confidence 99999999999999 899999999999987643 334556 99999999873 567899999998864
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
++++|++++|+||||.+++ +++|.++|++||+++|+||+|+.. ... .++.. .+.++++.|
T Consensus 164 -~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g---~~~-~~~~~------------~~~d~~~~s 223 (406)
T 1kmj_A 164 -KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVM---HHP-VDVQA------------LDCDFYVFS 223 (406)
T ss_dssp -TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTT---TSC-CCHHH------------HTCSEEEEE
T ss_pred -CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcC---CCC-Ccccc------------cCCCEEEEE
Confidence 7899999999999999999 667899999999999999999842 111 12221 256788999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcc----------------------c-ccCcHHHHHHHH-HHhcCchhhHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSS----------------------F-GLVSSQTQYLLS-ALLSDKKFTQNY 325 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~----------------------~-~~~s~~~q~~~~-~~l~~~~~~~~~ 325 (469)
+||.+|.+| +||++++ +.+.+.+..... + ...+.+.+.++. ++++... ..+
T Consensus 224 ~~K~~g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~ 298 (406)
T 1kmj_A 224 GHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVS--ALG 298 (406)
T ss_dssp GGGTTSCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH--HHC
T ss_pred chhccCCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHH--HcC
Confidence 999999888 8999995 444443332211 1 113445554433 3443211 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCceecC--CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC---
Q 043923 326 ISENKKRLKQRHRKLVSGLEKA-GISCLKS--NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--- 399 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~--~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--- 399 (469)
+++.+++++++++++.+.|+++ |+++.++ .++++. +.++.. +..++.+ .+.++||.+.||..|..
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~-~l~~~gi~v~~g~~~~~~~~ 369 (406)
T 1kmj_A 299 LNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIA-FNLGKH-------HAYDVGS-FLDNYGIAVRTGHHCAMPLM 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEE-EEETTC-------CHHHHHH-HHHHTTEECEEECTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEE-EEECCC-------CHHHHHH-HHhhCCcEEEeccccchHHH
Confidence 5677788888999999999988 8888877 666555 456521 1234554 44677999999986531
Q ss_pred ---CCCCeEEEEeecC-CHHHHHHHHHHHHHHHHhh
Q 043923 400 ---TEPGWFRVCFANM-SEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 400 ---~~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~ 431 (469)
..++++||+++.. +++++++++++|+++++..
T Consensus 370 ~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 370 AYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 1257999999864 9999999999999998754
No 92
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=6.2e-32 Score=267.49 Aligned_cols=337 Identities=16% Similarity=0.115 Sum_probs=240.4
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.+++|+|+.+.+..+++.+.+++.+. ...|+...|..++++++++++.+.++ .++++|++
T Consensus 12 ~p~~i~l~~~~~~~~~~~v~~a~~~~----------------~~~~~~~~g~~~~~~~~~~~l~~~~g----~~~~~v~~ 71 (359)
T 1svv_A 12 KPKPYSFVNDYSVGMHPKILDLMARD----------------NMTQHAGYGQDSHCAKAARLIGELLE----RPDADVHF 71 (359)
T ss_dssp ---CEECSCSCSSCCCHHHHHHHHHH----------------TTCCCCSTTCSHHHHHHHHHHHHHHT----CTTSEEEE
T ss_pred CCeeEEecCCCcCCCCHHHHHHHHHH----------------HhhccccccccHHHHHHHHHHHHHhC----CCCccEEE
Confidence 34689999988886677777777653 12466666778899999999888776 57889999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH--HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH-hcCCcee
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR--DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ-KRHLKVK 193 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~~~ 193 (469)
|+|+++|+..++.+++++||.|+++.|+|..+.. .+... |++++.+|.+ ++.+|++++++++++.. ..+.+++
T Consensus 72 ~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~ 147 (359)
T 1svv_A 72 ISGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEAT-GHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPK 147 (359)
T ss_dssp ESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHT-TCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEE
T ss_pred eCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHhcC-CCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCce
Confidence 9999999999999999999999999999998876 36666 9999999975 56799999999997610 0112489
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc-cchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF-VSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
+|++++| ||||.+++.+++++|+++|++||+++|+||+|.++.++..+. .....+ . ....+++.|.+|
T Consensus 148 ~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~---------~~~d~~~~s~~K 216 (359)
T 1svv_A 148 LVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADI-A---------RLTDMFYIGATK 216 (359)
T ss_dssp EEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHH-H---------HHCSEEEEECTT
T ss_pred EEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhh-h---------hcCCEEEEeccc
Confidence 9999999 799999999999999999999999999999995432232111 111111 0 022366779999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHh---cccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATKM---SSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~~---~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
..+ ..++|+++++++.+.. +... .... ..+......+.+++.+.. +++.+++++++++++.+.|+..|
T Consensus 217 ~g~--~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~ 288 (359)
T 1svv_A 217 AGG--MFGEALIILNDALKPN-ARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLEACG 288 (359)
T ss_dssp TTC--SSCEEEEECSGGGCTT-HHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCC--CCceEEEEEcccHHHH-HHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhccCC
Confidence 743 3568999986544322 2221 1111 112223333445565532 35677788888999999995558
Q ss_pred CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 349 ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 349 ~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
+++..+.+++|+|++++. ++++.+++++||.+.+.. ...++++|++++. .+++++++++++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 354 (359)
T 1svv_A 289 IRLAWPSASNQLFPILEN-----------TMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRL 354 (359)
T ss_dssp CCBSSCCSSSEECBEEEH-----------HHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred eEEccCCccceEEEEcCH-----------HHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHH
Confidence 888877888999987752 466666655599983211 1235689999875 4899999999999988
Q ss_pred HHh
Q 043923 428 VDS 430 (469)
Q Consensus 428 l~~ 430 (469)
+++
T Consensus 355 ~~~ 357 (359)
T 1svv_A 355 VAS 357 (359)
T ss_dssp ---
T ss_pred Hhc
Confidence 754
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=2.9e-33 Score=280.38 Aligned_cols=334 Identities=16% Similarity=0.167 Sum_probs=235.5
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC-CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD-YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+.|.|+.+....+++.+.+++.+....... . + ......|+. ..+..+|+++++++++ +++++|++|
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~-~-~---~~~~~~y~~~~~~~~~l~~~la~~~g--------~~~~~v~~~ 82 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQE-N-G---PFSIAANQHIQQLIAQLRQALAETFN--------VDPNTITIT 82 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHH-H-C---SSSHHHHHHHHHHHHHHHHHHHHHTT--------SCGGGEEEE
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhc-c-C---CcchhhHHHHHHHHHHHHHHHHHHcC--------CCHHHEEEe
Confidence 578888877554555666666553110000 0 0 000114554 3567899999999985 567899999
Q ss_pred CChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHH----HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 118 AGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 118 ~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|+++|+..++.++ +++||+|+++.|+|..+... ++.. |++++.++.+...++.+|++++++++++ ++
T Consensus 83 ~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~ 155 (390)
T 1elu_A 83 DNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARF-GITYRFFPVAATLNQGDAAAVLANHLGP------KT 155 (390)
T ss_dssp SSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHH-CCEEEEECCGGGSSSSCHHHHHHTTCCT------TE
T ss_pred CChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHh-CcEEEEEcCCCCCCccchHHHHHHhcCC------Cc
Confidence 99999999999999 89999999999999987643 3455 9999999986434677899999988764 78
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHH----hcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIIT----EKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~----~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
++|++++|+||||.+++ +++|.++|+ +||+++|+||+|+ ++... .. + . ..+.++++.
T Consensus 156 ~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~---~g~~~-~~---~-~--------~~~~d~~~~ 216 (390)
T 1elu_A 156 RLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQS---AGSLP-LD---F-S--------RLEVDYYAF 216 (390)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTT---BTTBC-CC---T-T--------TSCCSEEEE
T ss_pred eEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccc---cCCcC-CC---h-h--------hcCCCEEEc
Confidence 99999999999999999 566888999 9999999999998 32211 11 1 1 225678899
Q ss_pred cCccccCCCcceEEEEEecCHHHHHHHHH------------------------hcccccCcHHHHHHHHHHhcCchhhHH
Q 043923 269 SLSKDLGLPGFRVGAIYSNDDMVVAAATK------------------------MSSFGLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 269 S~SK~~g~~GlRiG~li~~~~~~~~~~~~------------------------~~~~~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
|+||.++ +|.++||++++++.+ +.+.. ....++.+.+.+.++.+++..... ..
T Consensus 217 s~~K~~~-~~~g~G~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~-~~ 293 (390)
T 1elu_A 217 TGHKWFA-GPAGVGGLYIHGDCL-GEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR-QG 293 (390)
T ss_dssp ESSSTTC-CCTTCEEEEECTTTG-GGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH-HC
T ss_pred ccccccc-CCCceEEEEECHHhH-hhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH-cC
Confidence 9999543 667799999975433 22211 011234555666655555542111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCceec---CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKA-GISCLK---SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~---~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
++++.+++++++++++.+.|+++ |+++.. +.+++ ++++++... +..++.+.|. ++||.+.+|.
T Consensus 294 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~l~-~~gi~v~~~~----- 360 (390)
T 1elu_A 294 TAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGL-VSFTVDSPL------GHRAIVQKLE-EQRIYLRTIA----- 360 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSE-EEEEECSSS------CHHHHHHHHH-HTTEECEEET-----
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccE-EEEEcCCCC------CHHHHHHHHH-HCCEEEEecC-----
Confidence 36778888999999999999987 888774 34554 445775321 1235666664 6799999886
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 401 EPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 401 ~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
.++++||+++. .+++++++++++|+++
T Consensus 361 ~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 35789999954 5999999999998753
No 94
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=5.7e-33 Score=276.49 Aligned_cols=340 Identities=16% Similarity=0.149 Sum_probs=236.5
Q ss_pred CCeeeeecccccc-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHH-HHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAENQL-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKA-LVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~a-ia~~l~~~~~~~~~~~~~~i~ 115 (469)
+++|.|+.+.+.. +++.+.+++.+..........+ . .....|.+..+..++++. ++++++ .+ +|+
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~~la~~~~--------~~--~v~ 73 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFC-T--TGRLDEIKTPPIHDFIHNQLPKFLG--------CD--VAR 73 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC-----------------------CCHHHHHHTHHHHHTT--------SS--EEE
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCcc-c--cccchhhHHHHHHHHHHHHHHHHcC--------CC--EEE
Confidence 3578888865443 3566677766642210000000 0 001234456788999999 999986 33 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEee--ccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 116 LTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ--CTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+|+|+++|+..++.+++++||.|+++.|+|..+...+... |++++.++ .+ .++.+|++++++++++.... ++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~-~~~~ 149 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERA-GLNIALVPKTDY--PDYAITPENFAQTIEETKKR-GEVV 149 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHT-TCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTT-SCEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHc-CCeEEEeecccC--CCCCcCHHHHHHHHHhhccc-CCeE
Confidence 9999999999999999999999999999999998888877 99999999 65 35779999999999743111 3789
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++|+||||.+++. ++|.++|++||+++|+||+|+...+. .++..+ +..+++.|+||+
T Consensus 150 ~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~------------~~di~~~s~sK~ 210 (371)
T 2e7j_A 150 LALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEI------------GADFIVGSGHKS 210 (371)
T ss_dssp EEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHH------------TCSEEEEEHHHH
T ss_pred EEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC----CChhhc------------CCCEEEecCCcC
Confidence 99999999999999995 66888999999999999999853221 222222 345889999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcc---------cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHH--HHHHHHHHH
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSS---------FGLVSSQTQYLLSALLSDKKFTQNYISENKKRL--KQRHRKLVS 342 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l--~~~~~~l~~ 342 (469)
++ ++.|+||++++++.+...+..... .+..+...+.++.+++... .. +.++++ +++++++.+
T Consensus 211 ~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~~~~~~~~~~~~~~l~~ 283 (371)
T 2e7j_A 211 MA-ASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV---RE---RIKRWDEEVEKARRFAA 283 (371)
T ss_dssp SS-CCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH---HH---HGGGHHHHHHHHHHHHH
T ss_pred CC-CCCCcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHH
Confidence 98 455999999976543220222221 2334445454444444321 11 445566 778888999
Q ss_pred HHHhcCCceecCC--ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC----CCCCeEE-EEeec--CC
Q 043923 343 GLEKAGISCLKSN--AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC----TEPGWFR-VCFAN--MS 413 (469)
Q Consensus 343 ~L~~~g~~v~~~~--~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~----~~~~~iR-i~~~~--~~ 413 (469)
.|+++|+++..+. .+.++|++++ +..++.+.+. ++||.+.| ..|.. ..++++| ++++. .+
T Consensus 284 ~L~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~ 352 (371)
T 2e7j_A 284 EMEKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLS 352 (371)
T ss_dssp HHHHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCC
T ss_pred HHHHcCcEEecCCCccCceEEEECC---------CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCC
Confidence 9988888887663 3568999886 1224556555 77999988 43322 1267899 99985 48
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 043923 414 EDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 414 ~e~i~~~l~~L~~~l~~~ 431 (469)
++++++++++|++++++.
T Consensus 353 ~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 353 DEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998753
No 95
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=9.8e-32 Score=269.73 Aligned_cols=332 Identities=14% Similarity=0.029 Sum_probs=236.0
Q ss_pred eeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCCh
Q 043923 41 IQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA 120 (469)
Q Consensus 41 i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~ 120 (469)
+-|+.+.+..+++.+.+++.+... ....|....++.++++++|++++ +++++|++|+|+
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~-------------~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v~~t~g~ 68 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVL-------------YDYDPAFQLLYEKVVDKAQKAMR--------LSNKPVILHGEP 68 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCC-------------CTTSHHHHHHHHHHHHHHHHHTT--------CSSCCEEESSCT
T ss_pred ceeecCCCcCCCHHHHHHHhcccc-------------ccccHHHHHHHHHHHHHHHHHhC--------CCCCEEEEeCCc
Confidence 555555444455667777665321 11111122356788888888875 467899999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEe
Q 043923 121 TSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 121 ~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~ 198 (469)
++++..++.+++++||.|+++.|+|+++. ..+... |++++.++++. ++.+|++++++++++ ++++++|+++
T Consensus 69 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~ 141 (392)
T 2z9v_A 69 VLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRY-SPHLLEIEVPY--NEAIDPQAVADMLKA----HPEITVVSVC 141 (392)
T ss_dssp HHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHH-CSCEEEEECCT--TSCCCHHHHHHHHHH----CTTCCEEEEE
T ss_pred hHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHc-CCceEEeeCCC--CCCCCHHHHHHHHhc----CCCCcEEEEe
Confidence 99999999999999999999999997652 333445 99999999874 346899999999863 2378899999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CC
Q 043923 199 NPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LP 277 (469)
Q Consensus 199 ~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~ 277 (469)
+|+||||.+++ +++|.++|++||++||+||+|+ ++... .++. ..+..+++.|+||+++ .+
T Consensus 142 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~---~g~~~-~~~~------------~~~~d~~~~s~sK~~~~~~ 202 (392)
T 2z9v_A 142 HHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSS---FGGMK-THPE------------DCKADIYVTGPNKCLGAPP 202 (392)
T ss_dssp SEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTT---BTTBS-CCGG------------GGTCSEEEECSSSTTCCCS
T ss_pred ccCCCCceecc---HHHHHHHHHHcCCeEEEEcccc---cCCcc-cccc------------cccceEEEecCcccccCCC
Confidence 99999999998 5568899999999999999997 32211 1211 1145688899999654 45
Q ss_pred cceEEEEEecCHHHHHHHHHh----------------------cccccCcHHHHHHHHHHhcCchhhHHH-HHHHHHHHH
Q 043923 278 GFRVGAIYSNDDMVVAAATKM----------------------SSFGLVSSQTQYLLSALLSDKKFTQNY-ISENKKRLK 334 (469)
Q Consensus 278 GlRiG~li~~~~~~~~~~~~~----------------------~~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~ 334 (469)
| +||++++++.+ +.+... ...++.+...+.++.++++.. .++ +++.+++++
T Consensus 203 g--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~ 276 (392)
T 2z9v_A 203 G--LTMMGVSERAW-AKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLY---LNEGPEAVWARHA 276 (392)
T ss_dssp C--CEEEEECHHHH-HHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHH
T ss_pred c--eeEEEECHHHH-HHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HhccHHHHHHHHH
Confidence 5 59999965443 333211 112334555555555555421 333 567788888
Q ss_pred HHHHHHHHHHHhcCCceec-CC---ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-
Q 043923 335 QRHRKLVSGLEKAGISCLK-SN---AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF- 409 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~~-~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~- 409 (469)
++++++.+.|+++|+++.. +. .++++|+.++... +..++.+.|.+++||.+.+|..+. .++++||++
T Consensus 277 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~ 348 (392)
T 2z9v_A 277 LTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGV------DEKALRQAARARYGVVFSSGRGET--LGKLTRIGHM 348 (392)
T ss_dssp HHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECEECCGGG--TTTEEEEECC
T ss_pred HHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCC------CHHHHHHHHHhcCCEEEecCCCCC--CCCeEEEeCc
Confidence 9999999999988888766 32 4578888886321 123567777655699999998543 367999995
Q ss_pred e-cCCHHHHHHHHHHHHHHHHhhcc
Q 043923 410 A-NMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 410 ~-~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+ ..+++++++++++|++++++.+-
T Consensus 349 ~~~~~~~~i~~~~~~l~~~~~~~~~ 373 (392)
T 2z9v_A 349 GPTAQPIYAIAALTALGGAMNAAGR 373 (392)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHHHHHHHHHcCC
Confidence 5 46999999999999999987653
No 96
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=6.8e-32 Score=272.02 Aligned_cols=344 Identities=11% Similarity=0.041 Sum_probs=239.4
Q ss_pred CCeeeeecccc-ccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE
Q 043923 38 TGIIQMGLAEN-QLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~ 115 (469)
.++|+++.+.+ .++ ++.+.+++.+....... ........|+...+..++++++|++++ .+++|+
T Consensus 46 ~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~la~~~~---------~~~~i~ 111 (401)
T 2bwn_A 46 QDITVWCGNDYLGMGQHPVVLAAMHEALEAVGA-----GSGGTRNISGTTAYHRRLEAEIAGLHQ---------KEAALV 111 (401)
T ss_dssp EEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCS-----CCCSBTTTBCCBHHHHHHHHHHHHHTT---------CSEEEE
T ss_pred CcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCC-----CCCCcCcccCChHHHHHHHHHHHHHhC---------CCcEEE
Confidence 34789988776 442 34565555542110000 000011235555678999999999985 257888
Q ss_pred EeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 116 LTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 116 ~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+++|++ ++..++.++. .+||.|+++.|+|..+...+... |++++.+|.+ |++++++.++... .++++
T Consensus 112 ~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~-------d~~~le~~l~~~~--~~~~~ 180 (401)
T 2bwn_A 112 FSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRN-AGPKRIFRHN-------DVAHLRELIAADD--PAAPK 180 (401)
T ss_dssp ESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHS-CCCEEEECTT-------CHHHHHHHHHHSC--TTSCE
T ss_pred ECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHc-CCeEEEEcCC-------CHHHHHHHHHhhc--cCCce
Confidence 888877 7777766653 58999999999999998888776 9999999864 6788888886421 12789
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
+|++++|+||||.+++ +++|+++|++||+++|+||+|+...|+... ........ . ..+.+++++|+||+
T Consensus 181 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g-~~~~~~~~-~------~~~~~i~~~s~sK~ 249 (401)
T 2bwn_A 181 LIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRG-AGVAERDG-L------MHRIDIFNGTLAKA 249 (401)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTS-CCHHHHHT-C------GGGCSEEEEESSST
T ss_pred EEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCC-ceeeeccC-c------cccCcEEEeechhh
Confidence 9999999999999999 566899999999999999999954454222 22221111 0 11347889999999
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhc-c--c-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMS-S--F-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~-~--~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
||++| ||++++ +.+.+.+.... . + ...+++.+.++.++++.... ..+++.+++++++++++.+.|+++|+
T Consensus 250 ~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~ 323 (401)
T 2bwn_A 250 YGVFG---GYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKT--AEGQKLRDAQQMHAKVLKMRLKALGM 323 (401)
T ss_dssp TCSCC---EEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCC---CEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99888 999995 44444443321 1 1 12345666666666543221 12366778888899999999988888
Q ss_pred ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 350 SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 350 ~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
++.++.++ ++|+.++.. .+..++++.|++++||.+.|+..|+.. +.+++|++++. .+++++++++++|+++
T Consensus 324 ~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 324 PIIDHGSH-IVPVVIGDP------VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp CBCCCSSS-CEEEECCCH------HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred cccCCCCC-eEEEEeCCh------HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 88777765 788988642 223456777766679999999877643 34699999985 4899999999999998
Q ss_pred HHh
Q 043923 428 VDS 430 (469)
Q Consensus 428 l~~ 430 (469)
+++
T Consensus 397 ~~~ 399 (401)
T 2bwn_A 397 WAR 399 (401)
T ss_dssp C--
T ss_pred HHh
Confidence 764
No 97
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.1e-31 Score=269.58 Aligned_cols=301 Identities=15% Similarity=0.167 Sum_probs=224.1
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCCEEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTS-KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGVEIVP 162 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~~~~~ 162 (469)
.+..++++.++++++ ++++ +|++|+|+++|+..++.+++++||.|+++.|+|..+. ..+... |++++.
T Consensus 52 ~~~~~l~~~la~~~g--------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~ 122 (393)
T 2huf_A 52 KIMDDIKEGVRYLFQ--------TNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRY-GADVRV 122 (393)
T ss_dssp HHHHHHHHHHHHHHT--------CCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHHhC--------CCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHc-CCeeEE
Confidence 356788888888885 4565 8999999999999999999999999999999998742 233445 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++++. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+||++. ++...
T Consensus 123 v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~---~~~~~ 189 (393)
T 2huf_A 123 VKSKV--GQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS---LGGAP 189 (393)
T ss_dssp EECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTTBC
T ss_pred EeCCC--CCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc---cCCCC
Confidence 99874 4578999999998753 6889999999999999999 5568899999999999999986 33221
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHHHh----cc-----------------
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKM----SS----------------- 300 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~~~----~~----------------- 300 (469)
..+. ..+.++++.|+||++ |++|+ ||+++++ .+.+.+... ..
T Consensus 190 -~~~~------------~~~~d~~~~s~sK~l~g~~G~--G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
T 2huf_A 190 -MFMD------------RWEIDAMYTGSQKVLGAPPGI--TPVSFSH-RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGR 253 (393)
T ss_dssp -CCTT------------TTTCSEEECCSSSTTCCCSSC--EEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS
T ss_pred -cchh------------hcCccEEEECCCcccccCCCe--EEEEECH-HHHHHHhhcCCCCceEEEchHHHHhhhccccc
Confidence 1111 225678889999974 56776 9999964 444444332 11
Q ss_pred ----cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccccCCh
Q 043923 301 ----FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 301 ----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~~~~~ 373 (469)
.++.+...+.++.++++... ...+++.+++++++++++.+.|+++|+++..+. +++++++.++...
T Consensus 254 ~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~----- 326 (393)
T 2huf_A 254 PRIYHHTISSTLLYGLREAIAMAC--EEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGV----- 326 (393)
T ss_dssp CCCCSCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTC-----
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCC-----
Confidence 12345556665555554321 122567788888999999999998888877653 3458888886321
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
+..++++.|++++||.+.+|..|. .++++||++ +. .+++++++++++|++++++.+..
T Consensus 327 -~~~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 327 -DWLKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPD 386 (393)
T ss_dssp -CHHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC-
T ss_pred -CHHHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 133577777766799999998653 367999999 53 37889999999999999887663
No 98
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.2e-31 Score=267.79 Aligned_cols=297 Identities=16% Similarity=0.202 Sum_probs=222.0
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDT--SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~ 162 (469)
...++++.++++++ +++ ++|++|+|+++++. ++.+++++||.|+++.|+|.. +...+... |++++.
T Consensus 36 ~~~~~~~~la~~~~--------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~ 105 (384)
T 3zrp_A 36 ALAYSLKGLRYVMG--------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRY-PVNVKV 105 (384)
T ss_dssp HHHHHHHHHHHHHT--------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTS-SCEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHc-CCcEEE
Confidence 45667777777775 445 88999999999999 999999999999999999855 44555555 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+|++. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+. ....
T Consensus 106 v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---~~~~ 172 (384)
T 3zrp_A 106 LRPSP--GDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSV---GAEE 172 (384)
T ss_dssp ECCST--TCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTT---TTSC
T ss_pred ecCCC--CCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccc---cCcc
Confidence 99874 4568999999999752 6899999999999999999 55689999999999999999973 2211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHH------------HHHh-----------c
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAA------------ATKM-----------S 299 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~------------~~~~-----------~ 299 (469)
..+. ..+.++++.|+||+++ ++.++||++++++.+... .... .
T Consensus 173 -~~~~------------~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T 3zrp_A 173 -VKAE------------EWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKA 238 (384)
T ss_dssp -CCTT------------TTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCC
T ss_pred -cccc------------ccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCC
Confidence 1111 2256788999999985 445599999966544332 0111 1
Q ss_pred cc-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceEEEEEecccccccCChh
Q 043923 300 SF-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGLFCWVDMRHLLRSNTFE 374 (469)
Q Consensus 300 ~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~----~g~~~~v~~~~~~~~~~~~ 374 (469)
.. ++.+...+.++.+++.... ...+++.+++++++++++.+.|+++|+++..+. +++++|+.++. .
T Consensus 239 ~~~g~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~------ 309 (384)
T 3zrp_A 239 AYFATPPVHVILQLAEAFRLIE--KEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-A------ 309 (384)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-S------
T ss_pred CcCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-C------
Confidence 11 2455555555555554211 222677888889999999999999888887766 56788898875 1
Q ss_pred HHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 375 AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 375 ~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+..++.+.+. ++||.+.+|..+.. +++|+++.. .+++++++++++|++++++.+.
T Consensus 310 ~~~~~~~~l~-~~gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 310 DPQKVLAGTV-NEGVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp CHHHHHHHHH-TTTCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHH-HCCEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 1235666665 55999999875432 899999875 4899999999999999987754
No 99
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=4.4e-32 Score=275.17 Aligned_cols=347 Identities=13% Similarity=0.122 Sum_probs=239.7
Q ss_pred CCCCCeeeeeccccccChHHHHHHHhcCCC--ccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 35 QNPTGIIQMGLAENQLSFDLLESWLDRNPD--AAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 35 ~~~~~~i~L~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
....++|.|+.+.+..+++.+.+++.+... .....+.. . .....|.......++++.++++++ ++++
T Consensus 18 ~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~la~~~~--------~~~~ 86 (423)
T 3lvm_A 18 RAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPAS-R--SHRFGWQAEEAVDIARNQIADLVG--------ADPR 86 (423)
T ss_dssp --CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTC-T--TSHHHHHHHHHHHHHHHHHHHHHT--------CCGG
T ss_pred cccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCc-c--ccchhHHHHHHHHHHHHHHHHHcC--------CCCC
Confidence 344578888888777667777777776422 10000000 0 000001111234677777777775 5788
Q ss_pred cEEEeCChHHHHHHHHHHhcC----CCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLAE----PGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~----~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+|++|+|+++|+..++.++.+ +||.|+++.|+|+.+...+ ... |++++.+|.+. ++.+|++++++++++
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~- 162 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLERE-GFEVTYLAPQR--NGIIDLKELEAAMRD- 162 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHT-TCEEEEECCCT--TSCCCHHHHHHHCCT-
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHc-CCEEEEeccCC--CCccCHHHHHHhcCC-
Confidence 999999999999999998873 7999999999999887665 444 99999999874 567899999998865
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++|++++|+||||.+++ +++|+++|++||++||+||+|+.. ... .... ..+.++
T Consensus 163 -----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~---~~~-~~~~------------~~~~di 218 (423)
T 3lvm_A 163 -----DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVG---KLP-IDLS------------QLKVDL 218 (423)
T ss_dssp -----TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT---TSC-CCTT------------TSCCSE
T ss_pred -----CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcC---CCC-cChh------------hcCCCE
Confidence 7899999999999999999 555889999999999999998732 111 1111 224668
Q ss_pred EEccCccccCCCcceEEEEEecCHHHHHHHHHh---------cccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM---------SSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQR 336 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~ 336 (469)
++.|+||.+|.+| +||++++++.... +... ...++.+...+.++.+++.. ..+++++.+++++++
T Consensus 219 ~~~s~sK~~g~~g--~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~ 292 (423)
T 3lvm_A 219 MSFSGHKIYGPKG--IGALYVRRKPRVR-IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---AKEEMATEMERLRGL 292 (423)
T ss_dssp EEEESTTTTSCSS--CEEEEECBTTBCC-CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred EEechHHhcCCCC--eEEEEEeccccCC-CCccccCCcccccccCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 8999999888666 8999986543322 1111 11233455666665555542 234467888899999
Q ss_pred HHHHHHHHHhc-CCceecCCc---eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCC-----------
Q 043923 337 HRKLVSGLEKA-GISCLKSNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTE----------- 401 (469)
Q Consensus 337 ~~~l~~~L~~~-g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~----------- 401 (469)
++++.+.|+++ ++++..+.+ +.++++.++.. +..++...+ .+ |.+.+|..|....
T Consensus 293 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g 362 (423)
T 3lvm_A 293 RNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALG 362 (423)
T ss_dssp HHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHH-hh--heeccCccccCCCccccHHHHHhC
Confidence 99999999888 888776553 23455555321 122445544 34 9999998765421
Q ss_pred ------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccccc
Q 043923 402 ------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTTLH 436 (469)
Q Consensus 402 ------~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~~~ 436 (469)
++++||+++. .+++++++++++|++++++.++.+.
T Consensus 363 ~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~ 404 (423)
T 3lvm_A 363 LNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSP 404 (423)
T ss_dssp CCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTSSH
T ss_pred CCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhccCc
Confidence 4789999985 4899999999999999998887443
No 100
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=6.7e-32 Score=266.51 Aligned_cols=331 Identities=13% Similarity=0.136 Sum_probs=224.2
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
|..+|+|+.++|++|++.+.+++.+.. .....|.+..+..+|++++|++++ .+.+++
T Consensus 2 ~~~~i~~~~~~~~~p~~~~~~a~~~~~-------------~~~~~y~~~~~~~~l~~~la~~~g----------~~~~~~ 58 (347)
T 1jg8_A 2 PHMMIDLRSDTVTKPTEEMRKAMAQAE-------------VGDDVYGEDPTINELERLAAETFG----------KEAALF 58 (347)
T ss_dssp ---CEECSCGGGCCCCHHHHHHHHTCC-------------CCCGGGTCCHHHHHHHHHHHHHHT----------CSEEEE
T ss_pred CceEEEeccccCCCCCHHHHHHHhcCC-------------CCCcccCCChHHHHHHHHHHHHhC----------CceEEE
Confidence 456899999999998887888876531 111257666788999999999986 246788
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
++|+++++.+++.+++++||.|+++.|+|..... .+... |++++.+ .+ .++.+|++++++++++.....++++
T Consensus 59 ~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~ 134 (347)
T 1jg8_A 59 VPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLS-GVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTS 134 (347)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHT-CCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEE
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhhcc-CeEEEEe-cC--CCCccCHHHHHHHhccccccccCce
Confidence 8888999999999999999999999999865332 34555 9999888 43 2456899999988752000012689
Q ss_pred EEEEecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEecccccc--ccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 194 GVLVTNPSNPL-GTTMSRNELNLLVNIITEKNIHLISDEIYSGT--VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 194 ~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
+|++++|+||| |.+++.+++++|+++|++||++||+||+|... .+.+. +...+.. ..+.+ +.|+
T Consensus 135 ~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~--------~~d~~--~~s~ 201 (347)
T 1jg8_A 135 LIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV---PVKEYAG--------YADSV--MFCL 201 (347)
T ss_dssp EEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC---CHHHHHH--------TCSEE--EEES
T ss_pred EEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC---ChHHhcc--------cccEE--EEec
Confidence 99999999999 99999999999999999999999999987521 11222 2222322 22333 3489
Q ss_pred ccccCCCcceEEE-EEecCHHHHHHHHHhccc-c---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 271 SKDLGLPGFRVGA-IYSNDDMVVAAATKMSSF-G---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 271 SK~~g~~GlRiG~-li~~~~~~~~~~~~~~~~-~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
||++|++ +|+ +++ ++.+.+.+...... + ..+.+.+.++...++.. .+...+ ..++++.+.+.|+
T Consensus 202 sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~-~~~~~~~l~~~L~ 270 (347)
T 1jg8_A 202 SKGLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM------VDRLKE-DHENARFLALKLK 270 (347)
T ss_dssp SSTTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS------STTHHH-HHHHHHHHHHHHH
T ss_pred ccccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHH
Confidence 9999743 564 555 44444433332211 1 12334444444444321 111112 2245577788887
Q ss_pred hcCCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHH
Q 043923 346 KAGISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQR 423 (469)
Q Consensus 346 ~~g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~ 423 (469)
++|+++. .+..++|+|++++.. . .+..++++.|. ++||.++++. .+++|++++. .+++++++++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~l~-~~gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~ 338 (347)
T 1jg8_A 271 EIGYSVNPEDVKTNMVILRTDNL--K---VNAHGFIEALR-NSGVLANAVS------DTEIRLVTHKDVSRNDIEEALNI 338 (347)
T ss_dssp HHTCBCCGGGCCSSEEEEECTTS--S---SCHHHHHHHHH-HHTEECEEEE------TTEEEEECCTTSCHHHHHHHHHH
T ss_pred hcCceeccCCCcceEEEEEcccc--c---CCHHHHHHHHH-HCCCEEecCC------CCeEEEEeCCCCCHHHHHHHHHH
Confidence 7777653 344557899998631 0 12335777776 5699999752 4689999954 589999999999
Q ss_pred HHHHHHh
Q 043923 424 LKAFVDS 430 (469)
Q Consensus 424 L~~~l~~ 430 (469)
|++++++
T Consensus 339 l~~~l~~ 345 (347)
T 1jg8_A 339 FEKLFRK 345 (347)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999864
No 101
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.9e-31 Score=271.34 Aligned_cols=342 Identities=15% Similarity=0.134 Sum_probs=242.2
Q ss_pred CCCeeeeecccc-cc-ChHHHHHHHhcCCCccccccCCccccc-ccccCC----CCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 37 PTGIIQMGLAEN-QL-SFDLLESWLDRNPDAAGFKRDGQSIFR-ELALFQ----DYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 37 ~~~~i~L~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~----~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
..++|||+.|.+ .+ +++.+.+++.+.... +. ....|. ......+|++.++++++ .
T Consensus 63 g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~G~~~~~~~l~~~la~~~g--------~ 124 (427)
T 2w8t_A 63 GKDTILLGTYNYMGMTFDPDVIAAGKEALEK----------FGSGTCGSRMLNGTFHDHMEVEQALRDFYG--------T 124 (427)
T ss_dssp TEEEEECSCCCTTCGGGCHHHHHHHHHHHHH----------HCSCCCSCTTTTCCCHHHHHHHHHHHHHHT--------C
T ss_pred CceEEEEECcccccCCCCHHHHHHHHHHHHH----------hCCCCcccccccCCcHHHHHHHHHHHHHhC--------C
Confidence 356899999965 22 345555555542100 00 011122 22335788888888874 2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+..++++++++++..++.+++++||.|+++.|+|..+...+... |.+++.++. .|++++++.+++.. .
T Consensus 125 --~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~-g~~~~~~~~-------~d~~~le~~l~~~~--~ 192 (427)
T 2w8t_A 125 --TGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQG-NAEIVRFRH-------NSVEDLDKRLGRLP--K 192 (427)
T ss_dssp --SEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHS-CSEEEEECT-------TCHHHHHHHHHTSC--S
T ss_pred --CceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCeeEEeCC-------CCHHHHHHHHHhcc--C
Confidence 24555666677999999999999999999999999999888877 999998873 48899999886421 1
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
.++++|++++|+||||.+++ +++|.++|++||+++|+||+|+.+.++.. ..++.+... + ..+.+++++|
T Consensus 193 ~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~-g~~~~~~~~-~------~~~~di~~~s 261 (427)
T 2w8t_A 193 EPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN-GRGVYEAQG-L------EGQIDFVVGT 261 (427)
T ss_dssp SSCEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT-SCCHHHHTT-C------TTCCSEEEEE
T ss_pred CCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCchHhhcC-C------CcCCcEEEec
Confidence 26889999999999999998 66789999999999999999998666532 123333221 0 2245899999
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHh-ccc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
+||++|++| ||+++++..+ +.+... ..+ +..+++.+.++.++|+.... .++.+++++++++++.+.|+
T Consensus 262 ~sK~~g~~g---G~v~~~~~l~-~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~----~~~~~~~~~~~~~~l~~~L~ 333 (427)
T 2w8t_A 262 FSKSVGTVG---GFVVSNHPKF-EAVRLACRPYIFTASLPPSVVATATTSIRKLMT----AHEKRERLWSNARALHGGLK 333 (427)
T ss_dssp SSSTTCSCC---EEEEECCTTG-GGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhccCC---CEEEeCHHHH-HHHHHhcccccccCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 999999777 9999965433 333222 111 23555665555566543221 35677888889999999999
Q ss_pred hcCCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHH
Q 043923 346 KAGISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN-MSEDTLKLSMQ 422 (469)
Q Consensus 346 ~~g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~-~~~e~i~~~l~ 422 (469)
++|+++. ++..|.++|+.++.. ....+++..|+++ ||.+.|+..|+.. +.+++|++++. .++++++++++
T Consensus 334 ~~g~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~ 406 (427)
T 2w8t_A 334 AMGFRLGTETCDSAIVAVMLEDQ------EQAAMMWQALLDG-GLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLG 406 (427)
T ss_dssp HHTCEESCSSCCSSEEEEEESSH------HHHHHHHHHHHHT-TEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHH
T ss_pred HcCCcccCCCCCCCEEEEEECCH------HHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHH
Confidence 8898887 442457888988642 2234567777654 9999999877643 35689999986 49999999999
Q ss_pred HHHHHHHhhccc
Q 043923 423 RLKAFVDSITTT 434 (469)
Q Consensus 423 ~L~~~l~~~~~~ 434 (469)
+|++++++..+.
T Consensus 407 ~l~~~l~~~~~~ 418 (427)
T 2w8t_A 407 MFQAAGRAVGVI 418 (427)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCcc
Confidence 999999877663
No 102
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3.3e-32 Score=271.94 Aligned_cols=298 Identities=15% Similarity=0.165 Sum_probs=221.9
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCCcChHHHHhh--hCCCEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGEAFLLPTPYYPGFDRDLKW--RTGVEI 160 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~~~--~~g~~~ 160 (469)
...++++.++++++ +++++|++|+|+++|+.+++.++. ++||.|++++|+|+.+...+.. ..|+++
T Consensus 44 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 44 AVQEAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEE
Confidence 46778888888875 567899999999999999999997 8999999999999988666542 139999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+.+|++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|+++|++||++ |+||+|+ ++.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~---~g~ 180 (382)
T 4eb5_A 116 EYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATAS---VGQ 180 (382)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTT---BTT
T ss_pred EEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchh---cCC
Confidence 9999874 467899999988864 7899999999999999999 45689999999999 9999998 332
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHHH-----HhcccccCcHHHHHHHHH
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAAT-----KMSSFGLVSSQTQYLLSA 314 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~~-----~~~~~~~~s~~~q~~~~~ 314 (469)
.. .++..+ +.++++.|+||.+|.+| +||++++++. +..... .....++.+...+.++.+
T Consensus 181 ~~-~~~~~~------------~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (382)
T 4eb5_A 181 IE-VDVEKI------------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGK 245 (382)
T ss_dssp BC-CCHHHH------------TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHH
T ss_pred cc-cCcccc------------CCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHH
Confidence 21 222221 45688899999988666 6899886652 211110 011123345555555555
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc---eEEEEEecccccccCChhHHHHHHHHHHHhCCeE
Q 043923 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLN 390 (469)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~ 390 (469)
++.. ..+.+++.+++++++++++.+.|+++ ++++..+.+ +.++++.++. . +..++.+.+. ++||.
T Consensus 246 al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~l~-~~gi~ 314 (382)
T 4eb5_A 246 AAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY-I------EGESIVLSLD-MAGIQ 314 (382)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT-S------CHHHHHHHHH-HHTCB
T ss_pred HHHH---HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC-c------CHHHHHHHHH-HCCEE
Confidence 5542 13456778888999999999999987 777766542 4567777762 1 1235666665 56999
Q ss_pred EeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 391 ISPGSSCHCT-----------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 391 v~pg~~f~~~-----------------~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.+|..|... .++++||+++. .+++++++++++|++++++.++
T Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 315 ASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999865432 25799999985 4899999999999999987765
No 103
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-31 Score=265.01 Aligned_cols=330 Identities=11% Similarity=0.110 Sum_probs=235.9
Q ss_pred eeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC--CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 40 IIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD--YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 40 ~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+++|+.|.. .+++.+.+++.+. +. +.|+. ..+..++++++|++++ .+.+++++++|
T Consensus 5 ~~~~~~gp~-~~~~~v~~a~~~~-------------~~--~~~~~~~~~~~~~l~~~la~~~g------~~~~~~~v~~~ 62 (366)
T 1m32_A 5 YLLLTPGPL-TTSRTVKEAMLFD-------------SC--TWDDDYNIGVVEQIRQQLTALAT------ASEGYTSVLLQ 62 (366)
T ss_dssp CEECSSSSC-CCCHHHHHTTCCC-------------CC--TTSHHHHTTTHHHHHHHHHHHHC------SSSSEEEEEEE
T ss_pred cccccCCCc-CCCHHHHHHHhhh-------------hc--CCCHHHHHHHHHHHHHHHHHHhC------CCCcCcEEEEe
Confidence 578888732 2455566665542 11 12221 1578999999999986 11234689999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEcc-CCCcC-hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPT-PYYPG-FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGV 195 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 195 (469)
+|+++|+..++.+++++||.|++.. |+|.. +...+... |++++.++.+. ++.+|++++++++++ .+++++|
T Consensus 63 ~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l~~----~~~~~~v 135 (366)
T 1m32_A 63 GSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLM-GIAHHAYDCGE--VARPDVQAIDAILNA----DPTISHI 135 (366)
T ss_dssp SCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHH-TCCEEEEECCT--TSCCCHHHHHHHHHH----CTTCCEE
T ss_pred cChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHh-CCceEEEeCCC--CCCCCHHHHHHHHhc----CCCeEEE
Confidence 9999999999999999999988776 55554 45556666 99999999863 456899999999875 1257889
Q ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccC
Q 043923 196 LVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG 275 (469)
Q Consensus 196 vl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 275 (469)
++++|+||||.+++ +++|.++|++||+++|+||+|+.. ... .++. ..+.++++.|+||+++
T Consensus 136 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~---~~~-~~~~------------~~~~di~~~s~~K~~~ 196 (366)
T 1m32_A 136 AMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFG---GIP-MDIA------------ALHIDYLISSANKCIQ 196 (366)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTT---TSC-CCTT------------TTTCSEEEEESSSTTC
T ss_pred EEecccCCcceecC---HHHHHHHHHHcCCEEEEECCcccc---CcC-cccc------------ccCccEEEecCccccc
Confidence 99999999999999 567899999999999999999732 111 1111 1245688999999874
Q ss_pred CCcceEEEEEecCHHHHHHHHHh----------------c--c--cccCcHHHHHHHHHHhcCchhhHHH--HHHHHHHH
Q 043923 276 LPGFRVGAIYSNDDMVVAAATKM----------------S--S--FGLVSSQTQYLLSALLSDKKFTQNY--ISENKKRL 333 (469)
Q Consensus 276 ~~GlRiG~li~~~~~~~~~~~~~----------------~--~--~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~l 333 (469)
.+.++||++++++.+ +.+... . . .++.+.+.+.++.++++.. .++ +++.++++
T Consensus 197 -~~~g~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~ 271 (366)
T 1m32_A 197 -GVPGFAFVIAREQKL-AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL---AKEGGVAARHQRY 271 (366)
T ss_dssp -CCSSEEEEEEEHHHH-TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHHTHHHHHHHHH
T ss_pred -CCCceEEEEECHHHH-HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH---HHccCHhHHHHHH
Confidence 334579999965433 222111 0 0 1345666666666666432 333 56778888
Q ss_pred HHHHHHHHHHHHhcCCceecC---CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 334 KQRHRKLVSGLEKAGISCLKS---NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 334 ~~~~~~l~~~L~~~g~~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
+++++++.+.|+++|+++..+ .+++++|+.++.... .+..++.+.+. ++||.+.+|..| .++++|++++
T Consensus 272 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~-~~gi~v~~~~~~---~~~~iRi~~~ 343 (366)
T 1m32_A 272 QQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQ----YRFSEFYRRLK-EQGFVIYPGKVS---QSDCFRIGNI 343 (366)
T ss_dssp HHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTT----CCHHHHHHHHH-HTTEECEECCCS---SSCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCC----CCHHHHHHHHH-HCCEEEECCcCC---CCCEEEEecC
Confidence 999999999999888877654 366799999874100 12335666666 559999999877 3679999998
Q ss_pred cC-CHHHHHHHHHHHHHHHHh
Q 043923 411 NM-SEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 411 ~~-~~e~i~~~l~~L~~~l~~ 430 (469)
.. +++++++++++|++++++
T Consensus 344 ~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 344 GEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp SSCCHHHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 64 799999999999998754
No 104
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.6e-31 Score=266.47 Aligned_cols=296 Identities=15% Similarity=0.159 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCCcChHHHHhhh--CCCEEEE
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA----EPGEAFLLPTPYYPGFDRDLKWR--TGVEIVP 162 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~~~~--~g~~~~~ 162 (469)
.++++.++++++ +++++|++|+|+++++..++.++. ++||.|+++.|.|+.+...+... .|++++.
T Consensus 46 ~~~~~~la~~~~--------~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~ 117 (382)
T 4hvk_A 46 QEAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEY 117 (382)
T ss_dssp HHHHHHHHHHTT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcC--------CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEE
Confidence 356666666654 567899999999999999999987 99999999999999887654431 3999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
+|.+. ++.+|++++++++++ ++++|++++|+||||.+++. ++|.++|++||+ +|+|++|+ ++...
T Consensus 118 v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~-li~D~a~~---~~~~~ 182 (382)
T 4hvk_A 118 IPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQPV---EEISEVLAGKAA-LHIDATAS---VGQIE 182 (382)
T ss_dssp ECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCCH---HHHHHHHSSSSE-EEEECTTT---BTTBC
T ss_pred eccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCCH---HHHHHHHHHcCE-EEEEhHHh---cCCCC
Confidence 99873 557899999998864 78999999999999999994 568889999999 99999987 32211
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHHHHH-----HhcccccCcHHHHHHHHHHh
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVAAAT-----KMSSFGLVSSQTQYLLSALL 316 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~~~~-----~~~~~~~~s~~~q~~~~~~l 316 (469)
.+... .+.++++.|+||.+|.+| +|+++++++. +..... .....++.+...+.++.+++
T Consensus 183 -~~~~~------------~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4hvk_A 183 -VDVEK------------IGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp -CCHHH------------HTCSEEEEESGGGTSCTT--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred -CCchh------------cCCCEEEEeHHHhcCCCc--eEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHHHH
Confidence 12221 145688999999888666 6676665432 100000 00112334556666665555
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCc---eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS 392 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~ 392 (469)
. +..+++++.+++++++++++.+.|+++ ++++..+.+ +.++++.++.. +..++.+.+ .++||.+.
T Consensus 248 ~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~ 316 (382)
T 4hvk_A 248 E---ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSL-DMAGIQAS 316 (382)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHHH-HHTTCBCB
T ss_pred H---HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHHH-HHCCEEEe
Confidence 4 224567888889999999999999987 777765543 23666666531 122455555 56799999
Q ss_pred CCCCCCCCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 393 PGSSCHCTE-----------------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 393 pg~~f~~~~-----------------~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|..|.... ++++||+++. .+++++++++++|++++++.++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 317 TGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 998776533 5799999985 4899999999999999988776
No 105
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.5e-31 Score=265.39 Aligned_cols=303 Identities=14% Similarity=0.120 Sum_probs=223.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-------------CCEEEEccCCCcChHHHHh
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP-------------GEAFLLPTPYYPGFDRDLK 153 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~ 153 (469)
+..++++++++++.+.++ +++++|++|+|+++|+..++.++..+ ||.|+++.|+|..+...+.
T Consensus 66 ~~~~~~~~l~~~la~~~~----~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~ 141 (397)
T 3f9t_A 66 GTKLLEEKAVALLGSLLN----NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE 141 (397)
T ss_dssp HHHHHHHHHHHHHHHHTT----CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHH
Confidence 456777777777776655 57889999999999999999998765 9999999999999999998
Q ss_pred hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 154 WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 154 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
.. |++++.+|.+. ++.+|++++++++++. ++++|++++|+||||.+.+ +++|.++|++||+++|+||+|
T Consensus 142 ~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 142 MM-DLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp HH-TCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTT
T ss_pred Hc-CceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccc
Confidence 88 99999999874 5778999999998752 6889999999999999988 556899999999999999999
Q ss_pred cccccCCCCc-cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc----------
Q 043923 234 SGTVFSSPGF-VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG---------- 302 (469)
Q Consensus 234 ~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~---------- 302 (469)
+.+.++.... .++..+..... ... +..+++.|++|.++ +|.|+|+++++++.+.+.+.....+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (397)
T 3f9t_A 211 GGLVIPFLDDKYKKKGVNYKFD---FSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILG 285 (397)
T ss_dssp GGGTGGGCCGGGCCTTCCCCCS---GGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCS
T ss_pred cchhhhhccccccccccccccc---ccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCcccccc
Confidence 8654321110 00000000000 002 45678899999875 88899999997765544332212221
Q ss_pred c---CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHH
Q 043923 303 L---VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 303 ~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
. .+.+.+.++...+. ...+++..+++.++++++.+.|+++|+++..+..+.++|+.++. ..++
T Consensus 286 ~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~ 351 (397)
T 3f9t_A 286 TRVGFGGACTYAVLRYLG-----REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YKEV 351 (397)
T ss_dssp SCCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HHHH
T ss_pred ccccchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HHHH
Confidence 1 13345555555553 23356677778889999999999988886555556777888763 2245
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
.+.+. ++||.+.+|.. ++++|++++. .+++++++++++|+++++
T Consensus 352 ~~~l~-~~gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 352 CKKLR-DRGIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHH-HTTCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHH-hCCeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 66665 55999998863 5799999985 489999999999998865
No 106
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.1e-31 Score=266.81 Aligned_cols=288 Identities=15% Similarity=0.169 Sum_probs=213.5
Q ss_pred ccCCCCCCcH---HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HH
Q 043923 80 ALFQDYHGLP---AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DL 152 (469)
Q Consensus 80 ~~Y~~~~g~~---~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~ 152 (469)
..|+. .|.+ +|++++|++++ . +++++++|+++|+..++.+++++||.|+++.|.|.++.. .+
T Consensus 54 ~~Y~~-~~~~~~~~l~~~ia~~~g--------~--~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~ 122 (404)
T 1e5e_A 54 YIYTR-LGNPTVSNLEGKIAFLEK--------T--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHAL 122 (404)
T ss_dssp CCBTT-TCCHHHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHH
T ss_pred ccccC-CcChHHHHHHHHHHHHhC--------C--CcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHH
Confidence 45776 4555 89999999985 2 378888888999999999999999999999999999887 56
Q ss_pred hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEec
Q 043923 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-KNIHLISDE 231 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-~~~~iI~De 231 (469)
... |++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+||
T Consensus 123 ~~~-g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 123 TKF-GIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HHT-TCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEEC
T ss_pred HHc-CCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEEC
Confidence 666 9999999864 66888888764 7999999999999999997 6679999999 999999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcccc---cCcHH
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSSFG---LVSSQ 307 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~~~---~~s~~ 307 (469)
+|+.+.+. . + ..+ ++++++.|+||+|+++|+|+ ||++++++.+.+.+......+ .++++
T Consensus 186 ~~~~~~~~-~---~-~~~------------~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 248 (404)
T 1e5e_A 186 TFCSPMIT-N---P-VDF------------GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPH 248 (404)
T ss_dssp TTTCTTTC-C---G-GGG------------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHH
T ss_pred CCchhhhC-C---c-ccc------------CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHH
Confidence 99976442 1 1 111 57889999999999999998 999997665553555444332 36778
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CceecC----CceEEEEEeccccc
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG---------------ISCLKS----NAGLFCWVDMRHLL 368 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---------------~~v~~~----~~g~~~~v~~~~~~ 368 (469)
.+.++.+.++.. ..+.++..++.+.+.+.+++.. +++.++ .++++.| ++++.
T Consensus 249 ~~~~~~~~l~~~-------~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~- 319 (404)
T 1e5e_A 249 DAWLITRGLSTL-------NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSG- 319 (404)
T ss_dssp HHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTH-
T ss_pred HHHHHHHhHhHH-------HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCC-
Confidence 888888888653 2233334445555566665542 222222 2666665 77631
Q ss_pred ccCChhHHHHHHHHHHHhCCeEEeCCCCCCC-----------------------CC--CCeEEEEeecCCHHHHHHHHHH
Q 043923 369 RSNTFEAEMELWKKIVYDVKLNISPGSSCHC-----------------------TE--PGWFRVCFANMSEDTLKLSMQR 423 (469)
Q Consensus 369 ~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~-----------------------~~--~~~iRi~~~~~~~e~i~~~l~~ 423 (469)
.+.+.+++++.|| +.+|..|+. .+ ++++||+++. +++++++++
T Consensus 320 --------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~li~~ 387 (404)
T 1e5e_A 320 --------FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIAD 387 (404)
T ss_dssp --------HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHH
T ss_pred --------HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHH
Confidence 1235567788899 555655552 12 5799999984 889999999
Q ss_pred HHHHHHhhcc
Q 043923 424 LKAFVDSITT 433 (469)
Q Consensus 424 L~~~l~~~~~ 433 (469)
|+++++..-.
T Consensus 388 l~~al~~~~~ 397 (404)
T 1e5e_A 388 FKQGLDALLR 397 (404)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999876554
No 107
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=9.4e-32 Score=265.62 Aligned_cols=294 Identities=14% Similarity=0.058 Sum_probs=219.2
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCCEEEEe
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGVEIVPI 163 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~~~~~v 163 (469)
.++.++++++|++++ +++++|++|+|+++|+..++.+++++||.|+++.|+|+++. ..+... |++++.+
T Consensus 34 ~~~~~l~~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v 104 (352)
T 1iug_A 34 EVFLKARGLLREAFR--------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEA-GLVVERL 104 (352)
T ss_dssp HHHHHHHHHHHHHHT--------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHhC--------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHHHc-CCceEEE
Confidence 356889999999886 45789999999999999999999999999999999998864 333445 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccCCC
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~~~ 241 (469)
+++. ++.+|++++++ +++++|++++|+||||.+++ +++|.++|++| |++||+||+|+ ++..
T Consensus 105 ~~~~--~~~~d~~~l~~---------~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~---~~~~ 167 (352)
T 1iug_A 105 DYPY--GDTPRPEDVAK---------EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTS---LLVG 167 (352)
T ss_dssp ECCT--TCCCCTTTSCC---------SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTT---BTTB
T ss_pred eCCC--CCCCCHHHHhc---------cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCcc---ccCc
Confidence 9874 34577777765 27889999999999999998 55688999999 99999999997 3322
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH------------HHH---HhcccccCcH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA------------AAT---KMSSFGLVSS 306 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~------------~~~---~~~~~~~~s~ 306 (469)
. ..+. ..+..+++.|+||+++ .+.++||++++++.+.. ... .....++.+.
T Consensus 168 ~-~~~~------------~~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (352)
T 1iug_A 168 E-VALE------------AMGVDAAASGSQKGLM-CPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAI 233 (352)
T ss_dssp C-CCSG------------GGTCSEEEEESSSTTC-CCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCH
T ss_pred c-eecc------------ccCeeEEEecCccccc-CCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCH
Confidence 1 1111 1145678899999554 22358999996554422 111 1122344666
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC-ceEEEEEecccccccCChhHHHHHHHHHHH
Q 043923 307 QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRHLLRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~ 385 (469)
..+.++.+++... .+++++.+++++++++++.+.|+++|+++..+. .++++|+.++... +..++++.+.
T Consensus 234 ~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~- 303 (352)
T 1iug_A 234 NLVLAVAAVLEEV---LPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGV------PYARVKEAFA- 303 (352)
T ss_dssp HHHHHHHHHHHHH---GGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTC------CHHHHHHHHH-
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCC------CHHHHHHHHH-
Confidence 7776666666532 222567788889999999999998888887764 6678999887321 1235666666
Q ss_pred hCCeEEeCCCCCCCCCCCeEEEEeecC-CHHHHHHHHHHHHHHHHhh
Q 043923 386 DVKLNISPGSSCHCTEPGWFRVCFANM-SEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 386 ~~GI~v~pg~~f~~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~ 431 (469)
++||.+.+|..+ ..++++||+++.. +++++++++++|++++++.
T Consensus 304 ~~gi~v~~~~~~--~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 304 QRGAVIAGGQGP--LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TTTEECEECCGG--GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HCCEEEEeCCCc--cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 559999998732 2467999999864 7999999999999998765
No 108
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=2.3e-30 Score=265.36 Aligned_cols=345 Identities=14% Similarity=0.123 Sum_probs=233.1
Q ss_pred eeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 40 IIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 40 ~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
.+|++.+.++.+ .+.+.+++... ...|.+..+..+|++++|++++ .+++++++
T Consensus 44 ylD~~~~~~~~~~~~~~~~a~~~~----------------~~~y~~~~~~~~l~~~la~~~~----------~~~~~~~~ 97 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMMMG----------------DEAYAGSENFYHLERTVQELFG----------FKHIVPTH 97 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHTTC----------------CCCSSSCHHHHHHHHHHHHHHC----------CSEEEEES
T ss_pred eeeeccccCCccCCHHHHHHhhcc----------------hhhcccChhHHHHHHHHHHHhC----------CCcEEEeC
Confidence 578888776654 34455554421 1257667788999999999985 35799999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCC-cChHHHHhhhCCCEEEEeeccCC----C----CcccCHHHHHHHHHHHHhcC
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYY-PGFDRDLKWRTGVEIVPIQCTSL----N----GFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y-~~~~~~~~~~~g~~~~~v~~~~~----~----~~~~d~~~l~~~i~~~~~~~ 189 (469)
|+++|+..++.+++++|| +++.|+| ..+...+... |++++.++++.+ . +|.+|++++++++++.. .
T Consensus 98 ~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~-G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t--~ 172 (456)
T 2ez2_A 98 QGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKN-GAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG--A 172 (456)
T ss_dssp SHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHT-TCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC--G
T ss_pred CcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHc-CCEEEEecccccccccccccccCCCCHHHHHHHHHhcc--c
Confidence 999999999999999999 7889999 7667777776 999999998732 1 36789999999997521 1
Q ss_pred CceeEEEEecCCC-CCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc----------cccCCCCccchhhhhhccccccC
Q 043923 190 LKVKGVLVTNPSN-PLGTTMSRNELNLLVNIITEKNIHLISDEIYSG----------TVFSSPGFVSIMEILKDRNCENT 258 (469)
Q Consensus 190 ~~~~~vvl~~P~N-PtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~----------~~~~~~~~~s~~~~~~~~~~~~~ 258 (469)
.++++|++++|+| |||.+++.+++++|+++|++||++||+||+|+. ..+.+....++.....
T Consensus 173 ~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~------- 245 (456)
T 2ez2_A 173 ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF------- 245 (456)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-------
T ss_pred cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-------
Confidence 2358999999998 999999999999999999999999999999985 2233322111110111
Q ss_pred CcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc-------cccCcHHHHHH-HHHHhcCchhhHHHHHHHH
Q 043923 259 QVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-------FGLVSSQTQYL-LSALLSDKKFTQNYISENK 330 (469)
Q Consensus 259 ~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-------~~~~s~~~q~~-~~~~l~~~~~~~~~~~~~~ 330 (469)
...+++++ |++|.++ +| +.||++++++.+.+.+..... ....+.....+ +.++++ .+. +...
T Consensus 246 -~~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~---~~~---~~~~ 315 (456)
T 2ez2_A 246 -SYADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE---AMQ---YEYI 315 (456)
T ss_dssp -TTCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH---HTC---HHHH
T ss_pred -ccCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH---HhH---HHHH
Confidence 11344444 7888765 77 789999855555444433221 11123222222 222221 111 1223
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccc---cccCChhHHHHHHHHHHHhCCeEEeC-CCCCC--------
Q 043923 331 KRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL---LRSNTFEAEMELWKKIVYDVKLNISP-GSSCH-------- 398 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~---~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f~-------- 398 (469)
++..+..+++.+.|++.|+++..+.+++++|+.+... .+...+ ....++..|++++||.+.+ |..|.
T Consensus 316 ~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~ 394 (456)
T 2ez2_A 316 EHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEF-PAQSLAASIYVETGVRSMERGIISAGRNNVTGE 394 (456)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGC-HHHHHHHHHHHHHSEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhc-cHHHHHHHHHHhcCeeeecccccccccCccccc
Confidence 3334455677788887788887788889999987531 111111 1223466665677998766 44331
Q ss_pred --CCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhcc
Q 043923 399 --CTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 399 --~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
....+++||+++. .+++++++++++|++++++..+
T Consensus 395 ~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~~ 433 (456)
T 2ez2_A 395 HHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKED 433 (456)
T ss_dssp BCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred cccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhhh
Confidence 1124789999985 4899999999999999987554
No 109
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=1.1e-30 Score=263.62 Aligned_cols=298 Identities=13% Similarity=0.116 Sum_probs=222.9
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSK-IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
..++++.++++++ .+.++ +++++|+++++..++.+++++||.|+++.|+|.+ +...+... |++++.+|
T Consensus 48 ~~~~~~~la~~~~--------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 118 (411)
T 3nnk_A 48 MNEVMALYRGVFR--------TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRC-RAEVHTIE 118 (411)
T ss_dssp HHHHHHHHHHHHT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHc-CCeEEEEe
Confidence 3556666666664 34554 7889999999999999999999999999999976 77777777 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.+ .++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+||+++ +.... .
T Consensus 119 ~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~---~~~~~-~ 184 (411)
T 3nnk_A 119 VP--WGEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATAS---LGGNP-L 184 (411)
T ss_dssp CC--TTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT---BTTBC-C
T ss_pred cC--CCCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcc---cCCcc-c
Confidence 86 45678999999999753 7899999999999999998 4558889999999999999987 32211 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-------------------------
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS------------------------- 299 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~------------------------- 299 (469)
... ..+.++++.|++|+++ ++.++||++++++. .+.+....
T Consensus 185 ~~~------------~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~ 250 (411)
T 3nnk_A 185 ETD------------VWGLDAVSAGMQKCLG-GPSGTSPITLSARM-EEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFD 250 (411)
T ss_dssp CTT------------TTTCSEEECCSTTTTC-CCSSEEEEEECHHH-HHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTC
T ss_pred chh------------ccCCcEEEecCccccC-CCCceEEEEECHHH-HHHHhhcccccccccccccccccCCCCcccccc
Confidence 111 2256788999999864 44579999996554 34333221
Q ss_pred -------------ccccCcHHHHHHHHHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEEEE
Q 043923 300 -------------SFGLVSSQTQYLLSALLSDKKFTQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFCWV 362 (469)
Q Consensus 300 -------------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~---g~~~~v 362 (469)
..++.+...+.++.+++... .++ +++.+++++++++++.+.|++.|+++..+.+ ++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 327 (411)
T 3nnk_A 251 LGMVMDYWGPERLNHHTEATTALFGARECARLI---LQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGV 327 (411)
T ss_dssp HHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEE
T ss_pred hHHHHhhhccccCCCCCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEE
Confidence 11334556666665555432 233 6778888999999999999999888776543 578888
Q ss_pred ecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ecC-CHHHHHHHHHHHHHHHHhhcc
Q 043923 363 DMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-ANM-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++...+ ..++.+.+++++||.+++|. +...++++||++ +.. +++++++++++|++++++...
T Consensus 328 ~~~~~~~------~~~l~~~l~~~~gi~v~~g~--~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 392 (411)
T 3nnk_A 328 VIPQGIN------GDQARKLMLEDFGIEIGTSF--GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKF 392 (411)
T ss_dssp ECCTTCC------HHHHHHHHHHHHSEEEEECC--GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred ECCCCCC------HHHHHHHHHHhcCeEEeCcc--CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 8864322 23577777777799999884 333467999998 543 799999999999999987654
No 110
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.6e-30 Score=262.91 Aligned_cols=340 Identities=16% Similarity=0.159 Sum_probs=233.5
Q ss_pred CCCeeeeeccccc-c-ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 37 PTGIIQMGLAENQ-L-SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 37 ~~~~i~L~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
...+|||+.+... + +++.+.+++.+....... + .......|+......+|++.++++++ . +..
T Consensus 58 g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~---~--~~~~~~~~g~~~~~~~l~~~la~~~g--------~--~~~ 122 (409)
T 3kki_A 58 SPDDIILQSNDYLALANHPLIKARLAKSLLEEQQ---S--LFMSASFLQNDYDKPMIEKRLAKFTG--------F--DEC 122 (409)
T ss_dssp CTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCC---C--CCSBGGGGCSTTTSCHHHHHHHHHHT--------C--SEE
T ss_pred CCceEEeeccCccCCcCCHHHHHHHHHHHHHcCC---C--CCccccccCCcHHHHHHHHHHHHHhC--------C--CeE
Confidence 4568999887422 2 234455554432100000 0 00011123333445788999998885 2 234
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
++++++++++..++.+++++||.|+++.|+|..+...+... |++++.++. .|++++++++++. ++++
T Consensus 123 i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~le~~l~~~-----~~~~ 189 (409)
T 3kki_A 123 LLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYA-NAQAHPFMH-------NNCDHLRMLIQRH-----GPGI 189 (409)
T ss_dssp EEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHT-TCEEEEECT-------TCHHHHHHHHHHH-----CSCE
T ss_pred EEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHc-CCeEEEecC-------CCHHHHHHHHHhc-----CCeE
Confidence 55555579999999999999999999999999998888877 999988874 4789999999763 5789
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||||.+++ +++|.++|++||++||+||+|+...++... ........ . ..+.++++.|+||++
T Consensus 190 vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g-~~~~~~~~-~------~~~~di~~~s~sK~~ 258 (409)
T 3kki_A 190 IVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNG-AGLLAELG-L------TREVHFMTASLAKTF 258 (409)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGG-CCHHHHHT-C------GGGCSEEEEESSSTT
T ss_pred EEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCC-CcchhhcC-C------CCCCCEEEeecchhh
Confidence 999999999999999 667999999999999999999875443221 12222211 0 124568899999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc--cc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS--FG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISC 351 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~--~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v 351 (469)
|.+| ||+++++..+......... +. ..+++.+.++.+.++.. .+ .++.+++++++++++.+.|+++|+++
T Consensus 259 ~~~g---g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~-~~~~~~~~~~~~~~l~~~L~~~g~~~ 331 (409)
T 3kki_A 259 AYRA---GAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII---ES-ADNRRQHLDRMARKLRIGLSQLGLTI 331 (409)
T ss_dssp CSSC---EEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH---HH-CHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCc---eEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9664 9999976544322221111 11 24455555555555432 21 25677888999999999999998876
Q ss_pred ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 352 LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 352 ~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
. ..++++|+.++.. .+..++++.++++ ||.+.|+..+. +.+.+++|++++. .+++++++++++|+++++
T Consensus 332 ~--~~~~~~~~~~~~~------~~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~ 402 (409)
T 3kki_A 332 R--SESQIIGLETGDE------RNTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVN 402 (409)
T ss_dssp C--CSSSEEEEEEESH------HHHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred C--CCCCEEEEEeCCH------HHHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHh
Confidence 6 3567888888642 2233567777655 99998865442 2346799999975 489999999999999987
Q ss_pred hh
Q 043923 430 SI 431 (469)
Q Consensus 430 ~~ 431 (469)
..
T Consensus 403 ~~ 404 (409)
T 3kki_A 403 YG 404 (409)
T ss_dssp HS
T ss_pred cC
Confidence 53
No 111
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.98 E-value=1e-30 Score=261.95 Aligned_cols=299 Identities=15% Similarity=0.135 Sum_probs=220.7
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
..++++.++++++ .+. ++|++|+|+++++..++.+++++||.|+++.++|.. +...+... |++++.++
T Consensus 58 ~~~l~~~la~~~~--------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~~~ 128 (393)
T 3kgw_A 58 MEEIKQGIQYVFQ--------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRI-GARVHQMI 128 (393)
T ss_dssp HHHHHHHHHHHHT--------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHc-CCceEEEe
Confidence 4566666766664 333 469999999999999999999999999999988742 24555566 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
++. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+||+|+ ++... .
T Consensus 129 ~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~---~g~~~-~ 194 (393)
T 3kgw_A 129 KKP--GEHYTLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVAS---LGGVP-I 194 (393)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---TTTSC-C
T ss_pred CCC--CCCCCHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcc---ccCcc-c
Confidence 874 3468999999999763 7899999999999999998 5568889999999999999987 22221 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc------------------------
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS------------------------ 300 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~------------------------ 300 (469)
... ..+..+++.|+||+++ ++.++||++++++. .+.+.....
T Consensus 195 ~~~------------~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (393)
T 3kgw_A 195 YMD------------QQGIDIMYSSSQKVLN-APPGISLISFNDKA-KYKVYSRKTKPVSFYTDITYLAKLWGCEGETRV 260 (393)
T ss_dssp CTT------------TTTCCEEEEESSSTTC-CCSSCEEEEECHHH-HHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCC
T ss_pred chh------------hcCCCEEEecCccccc-CCCceeEEEECHHH-HHHHhccCCCCCceeecHHHHHHhhhhccccCC
Confidence 111 2245678889999884 44458999995554 344432110
Q ss_pred -cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceEEEEEecccccccCChhH
Q 043923 301 -FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGLFCWVDMRHLLRSNTFEA 375 (469)
Q Consensus 301 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~----~g~~~~v~~~~~~~~~~~~~ 375 (469)
.++.+...+.++.+++.... ...+++.+++++++++++.+.|+++|+++..+. .++++|+.++... +
T Consensus 261 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~ 332 (393)
T 3kgw_A 261 IHHTTPVTSLYCLRESLALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGY------N 332 (393)
T ss_dssp CCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTB------C
T ss_pred CCCCCCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCC------C
Confidence 12345666666655554321 223677888899999999999999988876433 3567788886432 2
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ecC-CHHHHHHHHHHHHHHHHhhcc
Q 043923 376 EMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-ANM-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++.+.+++++||.+.+|..+. .++++|+++ +.. +++++++++++|++++++.++
T Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 333 WRDIVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp HHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 33577777766699999987543 467999998 643 899999999999999988765
No 112
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.98 E-value=6.3e-31 Score=265.18 Aligned_cols=340 Identities=14% Similarity=0.102 Sum_probs=230.9
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCC---CcHH--HHHHHH-HHHHhHcCCCCCCCC
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYH---GLPA--FKKALV-EFMSEIRGNKVTFDT 111 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--Lr~aia-~~l~~~~~~~~~~~~ 111 (469)
.++|||+.++|++ ++.+.+++.+.... .....|+... |.+. ++++++ +.+.+.++ .++
T Consensus 23 ~~~i~~~~~~~~~-~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~~~ 86 (407)
T 2dkj_A 23 REGLELIASENFV-SKQVREAVGSVLTN-----------KYAEGYPGARYYGGCEVIDRVESLAIERAKALFG----AAW 86 (407)
T ss_dssp HTSEECCTTCCCC-CHHHHHHHTSGGGG-----------CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSE
T ss_pred hcceeeccCCCCC-CHHHHHHHHhhhhc-----------CcccCCCcccccCCchHHHHHHHHHHHHHHHHhC----CCc
Confidence 4679999999998 55566666553110 0123454332 4343 444322 23443333 455
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH---HHHhhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD---RDLKWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---~~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++|++++|+ +|+..++.+++++||.|+++.|+|..+. ..+... |. ..+++++++ .++.+|++++++++++.
T Consensus 87 ~~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~- 162 (407)
T 2dkj_A 87 ANVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFS-GKLYKVVSYGVRP-DTELIDLEEVRRLALEH- 162 (407)
T ss_dssp EECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHH-HHHSEEEEECCCT-TTSSCCHHHHHHHHHHH-
T ss_pred ceEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhc-CceEEEEecCCCc-ccCccCHHHHHHHHhhc-
Confidence 667777775 5999999999999999999999998883 444444 66 444444342 35779999999999742
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc-cccCCCCccchhhhhhccccccCCcCCeEE
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG-TVFSSPGFVSIMEILKDRNCENTQVWNRVH 265 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i 265 (469)
++++|++++|+|| ...+ +++|.++|++||+++|+||+|+. +.+.+.. .+. + . ..++
T Consensus 163 ----~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~-~~~--~-~----------~~di 219 (407)
T 2dkj_A 163 ----RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLH-PNP--L-P----------YAHV 219 (407)
T ss_dssp ----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCS-CCC--T-T----------TCSE
T ss_pred ----CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCcc-CCc--c-c----------cccE
Confidence 6889999999998 4555 67799999999999999999986 3333321 111 1 1 2568
Q ss_pred EEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHH
Q 043923 266 IVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVS 342 (469)
Q Consensus 266 ~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~ 342 (469)
+++|+||.+ +|.|+||++++++.+.+.+......+ ..+.....++.+++.... ..++++.+++++++++++.+
T Consensus 220 ~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 220 VTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEAL--QPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHH
Confidence 899999955 68899999997455555554433222 223333334445554311 23567788888999999999
Q ss_pred HHHhcCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC----CCCCCCeEEEEeec-----C
Q 043923 343 GLEKAGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC----HCTEPGWFRVCFAN-----M 412 (469)
Q Consensus 343 ~L~~~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f----~~~~~~~iRi~~~~-----~ 412 (469)
.|+++|+++.. +..++++|+.++... .+..++.+.+ .++||.+.+|..| ....++++|++++. .
T Consensus 296 ~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 369 (407)
T 2dkj_A 296 ELARRGYRIVTGGTDNHLFLVDLRPKG-----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGF 369 (407)
T ss_dssp HHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTC
T ss_pred HHHhCCceeecCCCCceEEEEECcccC-----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCC
Confidence 99998888775 356789999987421 1123455555 5789999998754 22346789999963 5
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 043923 413 SEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 413 ~~e~i~~~l~~L~~~l~~ 430 (469)
+++++++++++|++++++
T Consensus 370 ~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 370 TPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 899999999999999987
No 113
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.98 E-value=2.3e-31 Score=270.19 Aligned_cols=350 Identities=11% Similarity=0.077 Sum_probs=229.3
Q ss_pred CCCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+.+ ++ +++.+.+++.+...... .....|.+..+..+|+++|++++. + . .++
T Consensus 40 g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~---------~~~~~~~~~~~~~~l~~~la~~~~---~---~-~~~ 103 (426)
T 1sff_A 40 GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS---------HTCFQVLAYEPYLELCEIMNQKVP---G---D-FAK 103 (426)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCS---------CCCTTTEECHHHHHHHHHHHHHSS---C---S-SCE
T ss_pred CCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCC---------CccccccCCHHHHHHHHHHHHhCC---c---c-ccc
Confidence 346899988875 33 44666666665321100 011135556688999999999983 1 1 358
Q ss_pred cEEEeCChHHHHHHHHH---HhcCCCCEEEEccCCCcChHH-HHhhhCCCE-------------EEEeeccC---CCCcc
Q 043923 113 KIVLTAGATSANETLMF---CLAEPGEAFLLPTPYYPGFDR-DLKWRTGVE-------------IVPIQCTS---LNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~---~l~~~gd~Vl~~~P~y~~~~~-~~~~~~g~~-------------~~~v~~~~---~~~~~ 172 (469)
+|++|+|+++|+..++. .+.++| .|++++|+|+.+.. .+... |.+ ++.+|++. ..++.
T Consensus 104 ~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 181 (426)
T 1sff_A 104 KTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALT-GKVNPYSAGMGLMPGHVYRALYPCPLHGISED 181 (426)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHS-SCCTTTTTTSCCCCSSEEEECCCBGGGTBCHH
T ss_pred EEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhc-CCccccccccCCCCCCcEEeCCCccccccchH
Confidence 99999999999999988 677777 89999999987654 34433 543 66666642 12345
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEE-ecCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLV-TNPSNPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl-~~P~NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
+|++++++++++.. ..+++++|++ ++|+| || .++|.+++++|.++|++||++||+||+|.++.+.+.. .++ +..
T Consensus 182 ~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~-~~~ 257 (426)
T 1sff_A 182 DAIASIHRIFKNDA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAM-EQM 257 (426)
T ss_dssp HHHHHHHHHHHHTC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGG-GGT
T ss_pred HHHHHHHHHHHhcc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhh-hhc
Confidence 78899998886310 0126777665 34577 99 7889999999999999999999999999975443321 111 111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 328 (469)
+..+.+.||||++|. |+|+||++++++ +.+.+... ...+..+++++.++.++|+.... ..
T Consensus 258 -----------~~~~di~s~sK~~~~-GlriG~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~-----~~ 319 (426)
T 1sff_A 258 -----------GVAPDLTTFAKSIAG-GFPLAGVTGRAE-VMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ-----EN 319 (426)
T ss_dssp -----------TSCCSEEEECGGGGT-SSCCEEEEEEHH-HHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-----TT
T ss_pred -----------CCCCCEEEEcccccC-CCceEEEEEcHH-HHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh-----cC
Confidence 112223499999995 999999999654 43333221 12234678888888766643210 12
Q ss_pred HHHHHHHHHHHHHHHHHhcC--C---ceecCCceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCCCCCCCCC
Q 043923 329 NKKRLKQRHRKLVSGLEKAG--I---SCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPGSSCHCTE 401 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~g--~---~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~ 401 (469)
..+++++.++++.+.|++++ + ....+. |+|+|++++..... ....+..+++..++ ++||.+.||..|
T Consensus 320 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~---- 393 (426)
T 1sff_A 320 LLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY---- 393 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC----
Confidence 23444555555665555431 2 223344 58999998532110 01123445677766 569999998764
Q ss_pred CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 402 PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 402 ~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
++++||+++. .+++++++++++|++++++.+
T Consensus 394 ~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 394 YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 5789999973 599999999999999987654
No 114
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.98 E-value=1.9e-30 Score=256.56 Aligned_cols=336 Identities=10% Similarity=0.135 Sum_probs=227.8
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL 116 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~ 116 (469)
.+++|||+.+.+..+++.+.+++.+... .....|+......++++.++++++ .+++|++
T Consensus 6 ~~~~id~~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g---------~~~~v~~ 64 (356)
T 1v72_A 6 RPPALGFSSDNIAGASPEVAQALVKHSS------------GQAGPYGTDELTAQVKRKFCEIFE---------RDVEVFL 64 (356)
T ss_dssp CCCCCBCSCGGGCCCCHHHHHHHHHTTS------------SCCCSTTCSHHHHHHHHHHHHHHT---------SCCEEEE
T ss_pred CCceEeeccCCccCCCHHHHHHHHhhcc------------CcccccccchHHHHHHHHHHHHhC---------CCCcEEE
Confidence 3478999988655566777777776411 112345433334556666666553 2446999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH--HhhhC-CCEEEEeeccCCCCcccCHHHHHH-HHHHHH-hcCCc
Q 043923 117 TAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD--LKWRT-GVEIVPIQCTSLNGFQITETAIEE-AYQLAQ-KRHLK 191 (469)
Q Consensus 117 t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~--~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~-~~~~~ 191 (469)
++|+++++..++.+++++||.|+++.|+|..+... +.... |++++.+|.+ ++.+|++++++ ++++.. ..+++
T Consensus 65 ~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~ 141 (356)
T 1v72_A 65 VPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQ 141 (356)
T ss_dssp ESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCE
T ss_pred eCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCC
Confidence 99999999999999999999999999998765544 44433 8899999875 36789999998 775310 11236
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc--CCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+++|++++|+| ||.+++.+++++|+++|++||++||+|++|..+.. .+.. .....+.. ...+++.|
T Consensus 142 ~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~----------~~d~~~~s 209 (356)
T 1v72_A 142 PACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS-PAEMTWKA----------GVDALSFG 209 (356)
T ss_dssp EEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC-TTTTTGGG----------TCCEEEEC
T ss_pred ceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC-HHHhhhhh----------cCCEEEEe
Confidence 89999999987 99999999999999999999999999999975321 1221 11111101 12234559
Q ss_pred CccccCCCcceEEEEEecCHHHHHHHHHhcc-ccc---CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043923 270 LSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-FGL---VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE 345 (469)
Q Consensus 270 ~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~-~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~ 345 (469)
+||+ |. .+..||++++++.+ +.+..... .+. .+...+..+...+.+..+ ....+++.++++++.+.|+
T Consensus 210 ~sK~-g~-~~G~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~L~ 281 (356)
T 1v72_A 210 ATKN-GV-LAAEAIVLFNTSLA-TEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQGLE 281 (356)
T ss_dssp CGGG-TC-SSCEEEEESSGGGH-HHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHHHT
T ss_pred cccC-CC-cCccEEEEECHHHH-hhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHh
Confidence 9998 53 34455888755443 33322211 111 122333334455655322 3345666778889999998
Q ss_pred hc-CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHH
Q 043923 346 KA-GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQR 423 (469)
Q Consensus 346 ~~-g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~ 423 (469)
++ |+++..+.+++|+|++++. ++++.+. ++||.+.||. |+ ++++|++++. .+++++++++++
T Consensus 282 ~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~l~-~~gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~ 345 (356)
T 1v72_A 282 GLGGVEVLGGTEANILFCRLDS-----------AMIDALL-KAGFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQ 345 (356)
T ss_dssp TCTTEEEESCCCSSEEEEEECH-----------HHHHHHH-HTTCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHH
T ss_pred hCCCcEEccCCCccEEEEEcCH-----------HHHHHHH-hcCeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHH
Confidence 85 8887767778899998762 4666664 6699999987 54 6799999875 489999999999
Q ss_pred HHHHHHhhc
Q 043923 424 LKAFVDSIT 432 (469)
Q Consensus 424 L~~~l~~~~ 432 (469)
|++++++.+
T Consensus 346 l~~~l~~~~ 354 (356)
T 1v72_A 346 VRLAADRTQ 354 (356)
T ss_dssp HHHTC----
T ss_pred HHHHHHhhc
Confidence 999876543
No 115
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.4e-31 Score=264.27 Aligned_cols=332 Identities=12% Similarity=0.077 Sum_probs=232.9
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCC----CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQ----DYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
+.+.|+.+.+..+++.+.+++.+...... ......|+ ...+..++++++|++++ +++++|
T Consensus 26 ~~~~ld~~~~~~~~~~v~~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v 89 (406)
T 3cai_A 26 GWVHFDAPAGMLIPDSVATTVSTAFRRSG--------ASTVGAHPSARRSAAVLDAAREAVADLVN--------ADPGGV 89 (406)
T ss_dssp SCEECBGGGCCCCCHHHHHHHHHHHHHCC--------SSSCSSSHHHHHHHHHHHHHHHHHHHHHT--------CCGGGE
T ss_pred CeEEEeCCCcCCCCHHHHHHHHHHHHhcC--------CCCCCccHHHHHHHHHHHHHHHHHHHHhC--------CCCCeE
Confidence 47889888887666666666655311000 00001232 12356888999999885 567899
Q ss_pred EEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHHHhh----hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 115 VLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRDLKW----RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
++|+|+++++.+++.++ +++||.|+++.|+|..+...+.. . |++++.+++++ .++.+|++++++++++
T Consensus 90 ~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~v~~v~~~~-~~~~~d~~~l~~~l~~--- 164 (406)
T 3cai_A 90 VLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRY-GAKVKWAEVDI-ETGELPTWQWESLISK--- 164 (406)
T ss_dssp EEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHH-BCEEEEECCCT-TTCCCCGGGHHHHCCT---
T ss_pred EEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhc-CCeEEEEecCc-ccCCcCHHHHHHHhCC---
Confidence 99999999999999887 78999999999999987655443 5 99999999873 2456899999988864
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIV 267 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i 267 (469)
++++|++++|+||||.+++. ++|.++|+++|++||+||+|+. +... .++..+ +.++++
T Consensus 165 ---~~~~v~~~~~~nptG~~~~l---~~i~~l~~~~~~~li~D~a~~~---g~~~-~~~~~~------------~~d~~~ 222 (406)
T 3cai_A 165 ---STRLVAVNSASGTLGGVTDL---RAMTKLVHDVGALVVVDHSAAA---PYRL-LDIRET------------DADVVT 222 (406)
T ss_dssp ---TEEEEEEESBCTTTCBBCCC---HHHHHHHHHTTCEEEEECTTTT---TTCC-CCHHHH------------CCSEEE
T ss_pred ---CceEEEEeCCcCCccccCCH---HHHHHHHHHcCCEEEEEccccc---CCCC-CCchhc------------CCCEEE
Confidence 78999999999999999984 5688899999999999999973 2111 222222 466888
Q ss_pred ccCccccCCCcceEE-EEEecCHHHHHHHHHhcc-----------cccCcHHHHHHHHHHhcCchh------------hH
Q 043923 268 YSLSKDLGLPGFRVG-AIYSNDDMVVAAATKMSS-----------FGLVSSQTQYLLSALLSDKKF------------TQ 323 (469)
Q Consensus 268 ~S~SK~~g~~GlRiG-~li~~~~~~~~~~~~~~~-----------~~~~s~~~q~~~~~~l~~~~~------------~~ 323 (469)
.|+||.+| ++ +| |+++++. +.+.+..... .++.+...+.++.+++..... +.
T Consensus 223 ~s~~K~~g-~~--~G~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 298 (406)
T 3cai_A 223 VNAHAWGG-PP--IGAMVFRDPS-VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLA 298 (406)
T ss_dssp EEGGGGTS-CS--CEEEEESCHH-HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHH
T ss_pred eehhhhcC-CC--cCeEEEEehH-HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhh
Confidence 99999887 65 89 9998543 4333322211 233455555444444421110 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCceecCC---ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC----
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA-GISCLKSN---AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS---- 395 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~---- 395 (469)
+++++.+++++++++++.+.|+++ ++++..+. ++ ++++.++.. +..++.+.|. ++||.+.+|.
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~L~-~~gi~v~~g~~~~~ 369 (406)
T 3cai_A 299 VSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV-------PADRVVQRLA-DNGILAIANTGSRV 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB-------CHHHHHHHHH-HTTEECEECCSCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc-------CHHHHHHHHH-HCCcEEecCChHHH
Confidence 256778888899999999999987 77776653 44 678887631 1234666654 6799999987
Q ss_pred --CCCCC-CCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 396 --SCHCT-EPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 396 --~f~~~-~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
.|+.. ..+++|++++. .+++++++++++|++
T Consensus 370 ~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 370 LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 33322 35789999986 379999999999875
No 116
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=3.1e-30 Score=260.79 Aligned_cols=298 Identities=12% Similarity=0.138 Sum_probs=221.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIV-LTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~-~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (469)
..++++.++++++ .+++.++ +++|+++++..++.+++++||.|+++.|+|.. +...+... |++++.+|
T Consensus 46 ~~~l~~~la~~~g--------~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 116 (416)
T 3isl_A 46 MNETMEMLRELFQ--------TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERY-GANVHMLE 116 (416)
T ss_dssp HHHHHHHHHHHTT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhc-CCeeEEEe
Confidence 4555666666554 4566665 88999999999999999999999999999987 55666666 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 165 CTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
++. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+. .... .
T Consensus 117 ~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---~~~~-~ 182 (416)
T 3isl_A 117 CEW--GTVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATI---GGCE-V 182 (416)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTT---TTSC-C
T ss_pred cCC--CCCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccc---cCCC-c
Confidence 874 3468999999999742 7899999999999999999 55689999999999999999872 2211 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc-------------------------
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS------------------------- 299 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~------------------------- 299 (469)
... ..+..+++.|++|+++ ++.++|+++++++.+ +.+....
T Consensus 183 ~~~------------~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~ 248 (416)
T 3isl_A 183 KVD------------EWKIDAAIGGTQKCLS-VPSGMAPITYNERVA-DVIAARKKVERGIATQADRAALSGNRPITSNY 248 (416)
T ss_dssp CTT------------TTTCSEEECCSSSTTC-CCSSEEEEEECHHHH-HHHHTC------------------CCCCSCST
T ss_pred chh------------hcCCCEEEecCccccC-CCCCeEEEEECHHHH-HHhhccccccccccccccchhccCCCCCCccc
Confidence 111 2246788999999854 445689999965543 3332110
Q ss_pred ---------------ccccCcHHHHHHHHHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCc---eEEE
Q 043923 300 ---------------SFGLVSSQTQYLLSALLSDKKFTQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNA---GLFC 360 (469)
Q Consensus 300 ---------------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~---g~~~ 360 (469)
..++.+...+.++.+++... .++ +++.+++++++++++.+.|++.|+++..+.+ +.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 325 (416)
T 3isl_A 249 FDLSQLEDYWSERRLNHHTEATTMLYALREGVRLV---LEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVT 325 (416)
T ss_dssp TCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEE
T ss_pred cchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEE
Confidence 12234566666665655432 333 6788889999999999999998888876653 5688
Q ss_pred EEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHH-HHHHHHHHHHHHHhhcc
Q 043923 361 WVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDT-LKLSMQRLKAFVDSITT 433 (469)
Q Consensus 361 ~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~-i~~~l~~L~~~l~~~~~ 433 (469)
++.++... +..++.+.|++++||.+.+|.. ...++++|+++.. .++++ +++++++|++++++...
T Consensus 326 ~~~~~~~~------~~~~l~~~L~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 392 (416)
T 3isl_A 326 CVEIPGGI------DGESVRDMLLAQFGIEIASSFG--PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA 392 (416)
T ss_dssp EEECCTTC------CHHHHHHHHHHHHCEECBCCCS--TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeCCCCC------CHHHHHHHHHHhCCEEEecCCC--CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 88886422 2335777777667999999873 2346799999943 35556 99999999999987754
No 117
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=8.7e-31 Score=258.48 Aligned_cols=295 Identities=11% Similarity=0.053 Sum_probs=217.2
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEe
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPI 163 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v 163 (469)
.+..++++.++++++ ++.++++|++|+|+++|+..++.++.+ |.|+++.|.|+.+ ...+... |++++.+
T Consensus 33 ~~~~~l~~~la~~~g------~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~-g~~~~~v 103 (353)
T 2yrr_A 33 RVNRAIQERLAALFD------PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALH-GLDPEVL 103 (353)
T ss_dssp HHHHHHHHHHHHHHC------CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHc-CCceEEE
Confidence 346788888888885 223478899999999999999999876 8999999998875 3444555 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
|.+. ++.+|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+||+|+ ++...
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~---~~~~~- 169 (353)
T 2yrr_A 104 DFPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTT---LGMLP- 169 (353)
T ss_dssp ECCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTT---TTTSC-
T ss_pred eCCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCcc---ccccc-
Confidence 9874 4578999999998742 6789999999999999998 4568889999999999999996 33222
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCcccc-CCCcceEEEEEecCHHHHHHHH-----------------HhcccccCc
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDL-GLPGFRVGAIYSNDDMVVAAAT-----------------KMSSFGLVS 305 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~GlRiG~li~~~~~~~~~~~-----------------~~~~~~~~s 305 (469)
.++..+ +..+++.|++|++ |.+| +||++++++.+ +.+. .....++.+
T Consensus 170 ~~~~~~------------~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 2yrr_A 170 FSMRAM------------GVDYAFTGSQKCLSAPPG--LAPIAASLEAR-KAFTGKRGWYLDLARVAEHWERGGYHHTTP 234 (353)
T ss_dssp CCHHHH------------TCSEEECCTTSTTCCCSS--CEEEEECHHHH-HHCCCCSCSTTCHHHHHHHHTTCCCSSCCC
T ss_pred cccccc------------CceEEEecCcccccCCCc--eEEEEECHHHH-HHhccCCCccccHHHHhhhhhcCCCCCCCC
Confidence 222222 3457788999966 4455 79999966544 2221 111223456
Q ss_pred HHHHHHHHHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCC--ceEEEEEecccccccCChhHHHHHHHH
Q 043923 306 SQTQYLLSALLSDKKFTQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSN--AGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 306 ~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~--~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
...+.++.+++... .+. +++.+++++++++++.+.|++.|+++.++. +++++|+.++... +..++.+.
T Consensus 235 ~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 305 (353)
T 2yrr_A 235 VLLHYALLEALDLV---LEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGV------DADRLVRA 305 (353)
T ss_dssp HHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTC------CHHHHHHH
T ss_pred HHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCC------CHHHHHHH
Confidence 66666666665432 222 567788889999999999998888877654 5677788886321 12356666
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHH-HHHHHHHHHHHh
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLK-LSMQRLKAFVDS 430 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~-~~l~~L~~~l~~ 430 (469)
+. ++||.+.+|..|. .++++|+++.. .++++++ +++++|++++++
T Consensus 306 l~-~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 306 LY-AEGVAVAGGIGPT--RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp HH-HTTEECEECCGGG--TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred HH-HCCEEEeCCcccc--CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 66 4599999998664 35789999943 5889999 999999998764
No 118
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=1.2e-30 Score=260.21 Aligned_cols=322 Identities=15% Similarity=0.134 Sum_probs=224.6
Q ss_pred CCCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+|||+.+.+ ++ +++.+.+++.+..... ......|+ ..+..+|+++++++++ + ++
T Consensus 27 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~---------~~~~~~y~-~~~~~~l~~~la~~~g--------~-~~ 87 (375)
T 2eh6_A 27 GKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL---------LHVSNLYE-NPWQEELAHKLVKHFW--------T-EG 87 (375)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHC---------SCCCTTBC-CHHHHHHHHHHHHTSS--------S-CE
T ss_pred CCEEEEcCCcccccccCCCCHHHHHHHHHHHHhc---------cccCcccC-CHHHHHHHHHHHhhcC--------C-CC
Confidence 346899998863 44 3456666665431100 01123564 3467899999999874 3 48
Q ss_pred cEEEeCChHHHHHHHHHH---hc---CCC-CEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCCccc
Q 043923 113 KIVLTAGATSANETLMFC---LA---EPG-EAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNGFQI 173 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~---l~---~~g-d~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~~~~ 173 (469)
+|++|+|+++|+..++.+ +. ++| |.|++++|+|+.+...+....+.. +..++. .
T Consensus 88 ~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 160 (375)
T 2eh6_A 88 KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------N 160 (375)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------T
T ss_pred eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------c
Confidence 999999999999999875 45 788 999999999998866554431221 333332 4
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhc
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKD 252 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~ 252 (469)
|++++++++++ ++++|++++|+||||.+ .+.+++++|.++|++||+++|+||+|+++...+.. .++..+ .
T Consensus 161 d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~-~- 231 (375)
T 2eh6_A 161 DIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHF-N- 231 (375)
T ss_dssp CHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGG-T-
T ss_pred hHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhc-C-
Confidence 78888887753 78999999999999998 56888999999999999999999999974332221 122211 1
Q ss_pred cccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 253 RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 253 ~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
...+++ |+||.++ +|+|+||++++++ +.+.+.. ....+..+++.+.++.++|+.. .+..
T Consensus 232 -------~~~d~~---s~SK~~~-~g~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~ 292 (375)
T 2eh6_A 232 -------LKPDVI---ALAKGLG-GGVPIGAILAREE-VAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-------EKLL 292 (375)
T ss_dssp -------CCCSEE---EECGGGG-TTSCCEEEEEEHH-HHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-------HHHH
T ss_pred -------CCCCEE---EEccccc-CCCCeEEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHH
Confidence 112333 8889999 7999999999654 4333332 1222335777887777666432 1556
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee
Q 043923 331 KRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA 410 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~ 410 (469)
++++++++++.+.|++++....++ .|+|+|++++.. ..++++.++ ++||.+.|+. ++++|++++
T Consensus 293 ~~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~--------~~~~~~~l~-~~gi~~~~~~------~~~iRi~~~ 356 (375)
T 2eh6_A 293 PHVREVGNYFKEKLKELGKGKVKG-RGLMLGLELERE--------CKDYVLKAL-EKGLLINCTA------GKVLRFLPP 356 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTSSEEEE-ETTEEEEECSSC--------CHHHHHHHH-HTTEECEEET------TTEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCceE-EEEEEEEEEcCc--------HHHHHHHHH-HCCCEEecCC------CCEEEEECC
Confidence 777888899999998876544444 457899988741 124666665 5799999862 578999987
Q ss_pred c-CCHHHHHHHHHHHHHHH
Q 043923 411 N-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 411 ~-~~~e~i~~~l~~L~~~l 428 (469)
. .+++++++++++|++++
T Consensus 357 ~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 357 LIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp TTCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhC
Confidence 4 59999999999998763
No 119
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=8.5e-30 Score=259.24 Aligned_cols=356 Identities=11% Similarity=0.055 Sum_probs=213.6
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .+++. ++.+.+++.+. +.....|....+..++++++++++.+.++ .+++
T Consensus 28 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~~ 90 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGHGRAEVGERMAAQ-------------AARLPFVHGSQFSSDVLEEYAGRLARFVG----LPTF 90 (430)
T ss_dssp SCEEEETTHHHHTCTTCBCCHHHHHHHHHH-------------HHHCCCCCTTTCEEHHHHHHHHHHHHHTT----CTTC
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHH-------------HHhcccccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 3468999987 56653 46666666542 12223344444556777788887777654 5678
Q ss_pred cEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCCC--------------EEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTGV--------------EIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g~--------------~~~~v~~~~~~~ 170 (469)
+|++|+|+++|+..++.++. .+++.|++.+|+|+++...+....+. .+..+|.+ +.
T Consensus 91 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 168 (430)
T 3i4j_A 91 RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKP--DP 168 (430)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCC--CT
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCC--cc
Confidence 99999999999999999886 44789999999999877554433122 12222221 11
Q ss_pred ---cccCHHHHHHHHHHHHhcCCceeEEEEecC-CC-CCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 171 ---FQITETAIEEAYQLAQKRHLKVKGVLVTNP-SN-PLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 171 ---~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~N-PtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
...|+++|++++++.. ..+++ +++++| +| ++|. +++.+++++|.++|++||+++|+||+|.++...+.. .
T Consensus 169 ~~~~~~~~~~le~~l~~~~--~~~~~-~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~ 244 (430)
T 3i4j_A 169 ARNGAEDAEGLRALLEREG--PETVA-AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-L 244 (430)
T ss_dssp TSCHHHHHTHHHHHHHHHC--GGGEE-EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-S
T ss_pred cchhhHHHHHHHHHHHhcC--CCCEE-EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-h
Confidence 1135588888887420 01444 455566 56 8886 678888999999999999999999999986444332 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH------hcccccCcHHHHHHHHHHhc
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK------MSSFGLVSSQTQYLLSALLS 317 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~------~~~~~~~s~~~q~~~~~~l~ 317 (469)
. ....+. ...++ .+|||+++ +| +|+||++++ +.+.+.+.. ....+..+++++.++.++|+
T Consensus 245 ~-~~~~~~-------~~~di---~t~sK~l~-~G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 245 A-LSRWSG-------VTPDI---AVLGKGLA-AGYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp G-GGGTTT-------CCCSE---EEECGGGT-TTSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred h-hhhhcC-------CCCcE---EEEccccc-CCccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 1 112100 11222 37899999 69 999999995 445555543 22334578899988888886
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecccccccCC---hhHHHHHHHHHHHhCCeEEeC
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRSNT---FEAEMELWKKIVYDVKLNISP 393 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~~~---~~~~~~l~~~ll~~~GI~v~p 393 (469)
.... .+..++.++..+..++.+.+.+.++ ++...++.+ .|+++.+.+...... .....++++.++ ++||.++|
T Consensus 312 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~ 388 (430)
T 3i4j_A 312 IVER-EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTG-LLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYP 388 (430)
T ss_dssp HHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEC------------CHHHHHHHHH-HTTEECC-
T ss_pred HHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEe
Confidence 4221 2223444444444444455544444 344555554 678788753211000 011235666666 66999999
Q ss_pred CCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 394 GSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 394 g~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+..+. ....+++||+++. .+++++++++++|++++++.
T Consensus 389 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 389 GSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp ----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 84332 2346789999885 49999999999999998754
No 120
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=1.6e-29 Score=252.48 Aligned_cols=327 Identities=12% Similarity=0.055 Sum_probs=214.4
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
+++|++.++++.+ ++.+.+++.. |. +...+.+++++.+.+.++ .. ++++++++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~--------------------~~---~~~~~~~~~~~~~a~~~g--~~-~~~~~~~~ 82 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNT--------------------YI---GSSYFAEKVNEYGLKHLG--GD-ENDKCVGF 82 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTS--------------------TT---HHHHHHHHHHHHHHHHHT--CC-TTEEEEEE
T ss_pred ceeeecccCCCCCCCHHHHHHHHH--------------------hc---CchHHHHHHHHHHHHHhC--CC-CcceEEEE
Confidence 4789998775554 4555555542 11 113444555555544444 11 34789999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+|+++++..++.++ +||.|+++.|+|+++.. .+... |++++.+ .|+++++++ + +++++
T Consensus 83 ~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~-g~~~~~v---------~d~~~l~~~-~------~~~~~ 143 (374)
T 2aeu_A 83 NRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIV-NAKYFES---------DKVGEILNK-I------DKDTL 143 (374)
T ss_dssp SSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHT-TCEEEEE---------SCHHHHHTT-C------CTTEE
T ss_pred cChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHc-CcEEEEe---------CCHHHHHhc-C------CCccE
Confidence 99999999999988 99999999998877544 45555 9999887 167777765 3 27899
Q ss_pred -EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 195 -VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 195 -vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
|++++|+||||. +..++++|.++|++||+++|+||+|+.+........+.... +.+++++|+||+
T Consensus 144 ~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~------------~~di~~~S~sK~ 209 (374)
T 2aeu_A 144 VIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL------------GADLVVTSTDKL 209 (374)
T ss_dssp EEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH------------TCSEEEEETTSS
T ss_pred EEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc------------CCcEEEecCccc
Confidence 999999999998 78899999999999999999999998652101100112222 346888999998
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcc-c-ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHH----HHHHHHHHHHHhc
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSS-F-GLVSSQTQYLLSALLSDKKFTQNYISENKKRLK----QRHRKLVSGLEKA 347 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~----~~~~~l~~~L~~~ 347 (469)
+ +|+|+||++++++ +.+.+..... + +.++++.+.++.+.+.... .+.+++..+..+ ++++.+.+.|...
T Consensus 210 l--~g~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (374)
T 2aeu_A 210 M--EGPRGGLLAGKKE-LVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN--LERIRKAFERAKNFDLSKIEKLNKELKAI 284 (374)
T ss_dssp S--SSCSCEEEEEEHH-HHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHCCCHHHHHHHHHHTTT
T ss_pred c--cCcceEEEEECHH-HHHHHHHhhccccCCCCHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5 5789999998654 4444443332 2 2367788888877776532 111122211111 1245566666552
Q ss_pred ----CCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecC--CHHHHHHH
Q 043923 348 ----GISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANM--SEDTLKLS 420 (469)
Q Consensus 348 ----g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~--~~e~i~~~ 420 (469)
|+.+.+ +.+.+|.|.+.+.... ..++.+++..+++++||.++||..|. ..++++||+++.. .+.+++++
T Consensus 285 ~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~~g~~~~-~~~~~lRi~~~~~~~~~~~l~~l 360 (374)
T 2aeu_A 285 DDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITITVAGMP-GASKSLRIDLTSRDAERIDDNYI 360 (374)
T ss_dssp CTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECSTTSSSC-SSCCSEEEETTSGGGGGSCHHHH
T ss_pred hhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEecCCCCC-CCCCeEEEEcCCchHHHHHHHHH
Confidence 556644 4444455555442111 01223466677878899999998773 3456899999742 23348888
Q ss_pred HHHHHHHHHhhcc
Q 043923 421 MQRLKAFVDSITT 433 (469)
Q Consensus 421 l~~L~~~l~~~~~ 433 (469)
++.|++++++..+
T Consensus 361 ~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 361 IKAIVESIKMAFK 373 (374)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 8888888887654
No 121
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=3.5e-29 Score=253.90 Aligned_cols=336 Identities=14% Similarity=0.065 Sum_probs=219.8
Q ss_pred CCCeeeeeccc--cccC---hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC-
Q 043923 37 PTGIIQMGLAE--NQLS---FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFD- 110 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~- 110 (469)
...+||++.+. |+++ ++.+.+++.+... ....|+...+..+++.++++.+.+.++ ++
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~ 103 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQ-------------KLAHAAANDFYNIPQLELAKKLVTYSP----GNF 103 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHT-------------TSCCCSCSCSCCHHHHHHHHHHHHHSS----CSS
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHh-------------hCccccccccCCHHHHHHHHHHHHhCC----CCc
Confidence 34689998887 4552 4666666655311 111122111222334444444444433 44
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-CCCEEEEccCCCcChHHHHhhhCC-------------CEEEEeeccCCCCcc----
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-PGEAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCTSLNGFQ---- 172 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-~gd~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~---- 172 (469)
+++|++|+|+++|+..+++++.. +||.|++.+|+|+++...+....| ..++.+|.+. .|.
T Consensus 104 ~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g 181 (419)
T 2eo5_A 104 QKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWH 181 (419)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTC
T ss_pred CCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--ccccccc
Confidence 78999999999999999987643 489999999999865443221111 2566777642 232
Q ss_pred ------------cCHHHHH-HHHHHHHhcCCceeEEEEecCC-CCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 173 ------------ITETAIE-EAYQLAQKRHLKVKGVLVTNPS-NPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 173 ------------~d~~~l~-~~i~~~~~~~~~~~~vvl~~P~-NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
+|+++++ +++++. ....+++ +++++|+ ||||. +.+.+++++|.++|++||+++|+||+|.++.
T Consensus 182 ~~~~~~~~~~~~~~~~~l~~~~i~~~-~~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g 259 (419)
T 2eo5_A 182 INGYENPSELVNRVIEFIEDYIFVNL-VPPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLG 259 (419)
T ss_dssp CCTTTCHHHHHHHHHHHHHHTHHHHT-CCGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred ccccccchhhHHHHHHHHHHHHHhhc-cCCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCc
Confidence 3578888 877631 0001454 5667785 57896 6789999999999999999999999999854
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHH-HhcccccCcHHHHHHHHHH
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAAT-KMSSFGLVSSQTQYLLSAL 315 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~ 315 (469)
+.+.. ....... ...+++ ||||+|| +| +|+||++++++.+ . +. .....+..+++++.++.++
T Consensus 260 ~~g~~--~~~~~~~--------~~~d~~---t~sK~~~-~G~~riG~~~~~~~~~-~-~~~~~~~t~~~n~~~~~aa~aa 323 (419)
T 2eo5_A 260 RTGKL--FAIENFN--------TVPDVI---TLAKALG-GGIMPIGATIFRKDLD-F-KPGMHSNTFGGNALACAIGSKV 323 (419)
T ss_dssp TTSSS--SGGGGGT--------CCCSEE---EECGGGG-TTTSCCEEEEEEGGGC-C-C------CCCCCHHHHHHHHHH
T ss_pred cCcch--hhHHhcC--------CCCCEE---Eeccccc-CCccceEEEEEchHhh-c-CCcccCCCCCCCHHHHHHHHHH
Confidence 43321 1112211 223333 8999999 69 9999999976544 2 22 2223344688999888888
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
|+.. . +.+++++++++++.+.|+++ +...++. |+|+|+++.... .... ++..++ ++||.++|+.
T Consensus 324 l~~~---~----~~~~~~~~~~~~l~~~L~~~-~~~~~~~-g~~~~i~~~~~~-----~~~~-~~~~l~-~~Gv~v~~~~ 387 (419)
T 2eo5_A 324 IDIV---K----DLLPHVNEIGKIFAEELQGL-ADDVRGI-GLAWGLEYNEKK-----VRDR-IIGESF-KRGLLLLPAG 387 (419)
T ss_dssp HHHH---H----HHHHHHHHHHHHHHHHHTTS-SSEEEEE-TTEEEEECSCHH-----HHHH-HHHHHH-HTTEECEEET
T ss_pred HHHH---H----HHHHHHHHHHHHHHHHHHHh-hhheEee-eEEEEEEEecCc-----cHHH-HHHHHH-HCCCEEecCC
Confidence 8532 2 26777888889999999876 4444444 478888884210 1233 666666 6799999863
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 396 SCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 396 ~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+++||+++. .+++++++++++|++++++.
T Consensus 388 ------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 388 ------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5689998864 49999999999999998753
No 122
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=1.2e-29 Score=253.72 Aligned_cols=296 Identities=13% Similarity=0.123 Sum_probs=217.4
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEc-cCCCcChH-HHHhhhCCCEEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA---EPGEAFLLP-TPYYPGFD-RDLKWRTGVEIVP 162 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~~-~P~y~~~~-~~~~~~~g~~~~~ 162 (469)
..++++.++++++... ++++++|++|+|+++++..++.++. ++||.|+++ .|+|..+. ..+... |++++.
T Consensus 40 ~~~~~~~l~~~~~~~~----~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~-g~~~~~ 114 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAA----ASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSY-GAQVDV 114 (385)
T ss_dssp HHHHHHHHHHHTTCCG----GGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHhCCCC----CCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHc-CCceEE
Confidence 5678888888886432 2567899999999999999999998 899999887 55666553 455666 999999
Q ss_pred eec-cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccccccccC
Q 043923 163 IQC-TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLISDEIYSGTVFS 239 (469)
Q Consensus 163 v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~Deay~~~~~~ 239 (469)
++. + .++.+|++++++++++ .++++|++++|+||||.+++ +++|.++|++| |++||+||+|+ +.
T Consensus 115 v~~~~--~~~~~d~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~---~~ 181 (385)
T 2bkw_A 115 VRPLK--IGESVPLELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCS---IG 181 (385)
T ss_dssp ECCSS--TTSCCCHHHHHHHHHH-----SCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTT---TT
T ss_pred EecCC--CCCCCCHHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccc---cC
Confidence 998 5 3567899999999874 16889999999999999998 45688999999 99999999997 32
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHH----------------------H
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAA----------------------T 296 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~----------------------~ 296 (469)
... .++. ..+.++++.|+||+++ .+| +||++++++.+.+.+ .
T Consensus 182 ~~~-~~~~------------~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 246 (385)
T 2bkw_A 182 CEE-FEFD------------EWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIME 246 (385)
T ss_dssp TSC-CCTT------------TTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHH
T ss_pred Ccc-cccc------------ccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHH
Confidence 221 1211 2245678899999764 466 599999665443121 1
Q ss_pred Hhcc-----cccCcHHHHHHHHHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHH-HhcCCceecC-----CceEEEEEec
Q 043923 297 KMSS-----FGLVSSQTQYLLSALLSDKKFTQNY-ISENKKRLKQRHRKLVSGL-EKAGISCLKS-----NAGLFCWVDM 364 (469)
Q Consensus 297 ~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L-~~~g~~v~~~-----~~g~~~~v~~ 364 (469)
.... +++.+...+.++.++++.. .+. +++.+++++++++++.+.| +++|+++..+ ..++++|+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~ 323 (385)
T 2bkw_A 247 NYEAGKGAYFATPPVQLINSLDVALKEI---LEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYV 323 (385)
T ss_dssp HHHTTCCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEEC
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEec
Confidence 1111 2345666666666665431 222 5667788889999999999 8878887653 2467889988
Q ss_pred ccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEE-ee----cCCHHHHHHHHHHHHHHHHh
Q 043923 365 RHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVC-FA----NMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~-~~----~~~~e~i~~~l~~L~~~l~~ 430 (469)
++ ..++++.|. ++||.+.+|..+.. .++++||+ ++ ..+++++++++++|++++++
T Consensus 324 ~~---------~~~~~~~l~-~~gi~v~~g~~~~~-~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 324 AD---------PPDVIAFLK-SHGVVIAGGIHKDI-GPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp SC---------HHHHHHHHH-HTTEECBCCCCTTT-GGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CC---------HHHHHHHHH-HCCeEEeCCCCccc-CCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 63 224666664 67999999876532 46799999 76 25899999999999998764
No 123
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=4.5e-29 Score=248.91 Aligned_cols=298 Identities=11% Similarity=0.101 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCCCEEEEeecc
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g~~~~~v~~~ 166 (469)
.++.+++.+++.+.++ ++.+.+.+++|+|+++++..++.+++++||.|+++.|.|.+.. ..+... |++++.++.+
T Consensus 51 ~~~~~~~~~~la~~~g--~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v~~~ 127 (376)
T 3f0h_A 51 SSTMLENEKFMLEYAK--APEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIH-EIPYVALKLE 127 (376)
T ss_dssp HHHHHHHHHHHHHHHT--CCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred HHHHHHHHHHHHHHhC--CCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEEeCC
Confidence 4555555555555544 2111244556999999999999999999999999998766543 234455 9999999986
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 167 SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 167 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+.. ... ..+
T Consensus 128 --~~~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~---~~~-~~~ 192 (376)
T 3f0h_A 128 --HGKKLTKEKLYEYDNQ------NFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFL---ADP-FNM 192 (376)
T ss_dssp --TTCCCCHHHHHTTTTS------CCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTT---TSC-CCH
T ss_pred --CCCCCCHHHHHHhhcc------CceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCcccc---Ccc-ccc
Confidence 3567899999887643 8899999999999999999 667999999999999999999742 221 121
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhc-------------------ccccCcH
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMS-------------------SFGLVSS 306 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~-------------------~~~~~s~ 306 (469)
.. .+..+++.|+||+++ .+| +|+++++++ +.+.+.... ..+..+.
T Consensus 193 ~~------------~~~d~~~~s~~K~l~~~~G--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (376)
T 3f0h_A 193 NE------------CGADVMITGSQKVLACPPG--ISVIVLAPR-GVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAV 257 (376)
T ss_dssp HH------------HTCSEEEEETTTTTCCCSS--CEEEEECHH-HHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCH
T ss_pred cc------------cCccEEEecCcccccCCCc--eEEEEECHH-HHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcH
Confidence 11 145688899999998 555 677888554 433333211 1122333
Q ss_pred HHHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHH
Q 043923 307 QTQYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIV 384 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll 384 (469)
....++.+++... .+ .+++.+++++++++++.+.|+++++++.++.....++.-.+.. .+..++.+.++
T Consensus 258 ~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~ 328 (376)
T 3f0h_A 258 GILLQINERLKEI---KKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTT------ANAYDIFLKLK 328 (376)
T ss_dssp HHHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESS------SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCC------CCHHHHHHHHH
Confidence 3333343333211 22 2577788888889999999998887766543322222211211 12335777777
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+++||.++||. +...++++|+++.. .+++++++++++|++++++
T Consensus 329 ~~~gi~v~~g~--~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 329 DEYGIWICPNG--GEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHSSEECEECC--GGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HhCCEEEecCc--cccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 66799999984 22346799999975 5999999999999999864
No 124
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=7.3e-30 Score=256.88 Aligned_cols=325 Identities=15% Similarity=0.122 Sum_probs=220.3
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++ +++.+.+++.+..... ......|+ .....+|++.+++++ + ++
T Consensus 39 g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~---------~~~~~~~~-~~~~~~l~~~la~~~----g------~~ 98 (397)
T 2ord_A 39 GNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKL---------IHCSNLFW-NRPQMELAELLSKNT----F------GG 98 (397)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC---------SCCCTTSE-EHHHHHHHHHHHHTT----T------SC
T ss_pred CCEEEECCccccccccCCCCHHHHHHHHHHHHhc---------ccCccccC-CHHHHHHHHHHHHhc----C------CC
Confidence 34678998763 555 3455666665531100 00001121 112344555555443 2 58
Q ss_pred cEEEeCChHHHHHHHHHHhcC------C-CCEEEEccCCCcChHH-HHhhhCCCE------------EEEeeccCCCCcc
Q 043923 113 KIVLTAGATSANETLMFCLAE------P-GEAFLLPTPYYPGFDR-DLKWRTGVE------------IVPIQCTSLNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~------~-gd~Vl~~~P~y~~~~~-~~~~~~g~~------------~~~v~~~~~~~~~ 172 (469)
+|++++|+++|+..++.++.. + ++.|++.+|+|.+... .+... |.+ ++.+|.+
T Consensus 99 ~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~-g~~~~~~~~~p~~~~~~~~~~~------ 171 (397)
T 2ord_A 99 KVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTAT-GQPKYQKPFEPLVPGFEYFEFN------ 171 (397)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHS-BCHHHHGGGCSCCTTEEEECTT------
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhcc-CChhhccccCCCCCCeeEecCC------
Confidence 999999999999999998753 4 4789999999966543 55544 665 6666642
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
|++++++++++ ++++|++++|+||||. +++.+++++|+++|++||+++|+||+|.++.+.+.. .++..+ .
T Consensus 172 -d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~-~ 242 (397)
T 2ord_A 172 -NVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKY-G 242 (397)
T ss_dssp -CHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHH-T
T ss_pred -CHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhh-C
Confidence 78899888764 7999999999999999 999999999999999999999999999875443332 222222 1
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
...+++ ||||+++ +|+|+||++++++.+ .+.. ....+..+++.+.++.++|+.... ++.
T Consensus 243 --------~~~d~~---s~sK~~~-~G~r~G~~~~~~~~~--~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~ 303 (397)
T 2ord_A 243 --------VVPDVL---TTAKGLG-GGVPIGAVIVNERAN--VLEPGDHGTTFGGNPLACRAGVTVIKELTK-----EGF 303 (397)
T ss_dssp --------CCCSEE---EECGGGG-TTSCCEEEEECSTTC--CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-----TTH
T ss_pred --------CCCCee---eeccccC-CCcCeEEEEEchHhc--ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-----CCH
Confidence 112222 8899999 999999999976643 3321 112234678888888777754221 345
Q ss_pred HHHHHHHHHHHHHHHHhc--CCce---ecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 330 KKRLKQRHRKLVSGLEKA--GISC---LKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~--g~~v---~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
+++++++++++.+.|+++ ++++ .++ .|.|+|++++... +..++++.+++ +||.+.||. +++
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~------~~~ 369 (397)
T 2ord_A 304 LEEVEEKGNYLMKKLQEMKEEYDVVADVRG-MGLMIGIQFREEV------SNREVATKCFE-NKLLVVPAG------NNT 369 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTEEEEEECTTS------CHHHHHHHHHH-TTEECEEET------TTE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceEEEEE-EeEEEEEEECChH------HHHHHHHHHHH-CCCEEccCC------CCE
Confidence 667777778888888765 3432 233 3478888886421 13356666664 799999872 578
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 405 FRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 405 iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+|++++. .+++++++++++|++++++
T Consensus 370 iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 370 IRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 9999764 5999999999999998864
No 125
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=1.5e-29 Score=254.02 Aligned_cols=323 Identities=15% Similarity=0.140 Sum_probs=221.7
Q ss_pred CCCeeeeeccccccC----hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAENQLS----FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+.++.+ ++.+.+++.+...... .....|+ .....++++.++++++ ++
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---------~~~~~~~-~~~~~~l~~~la~~~g----------~~ 94 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVT---------LTSRAFH-SDQLGPWYEKVAKLTN----------KE 94 (392)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS---------CCCTTSE-ETTHHHHHHHHHHHHT----------CS
T ss_pred CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcc---------ccccccC-CHHHHHHHHHHHHhcC----------CC
Confidence 456899998865543 4556666554311100 0011132 2345777777777763 67
Q ss_pred cEEEeCChHHHHHHHHHHhcCC----------CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFCLAEP----------GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~----------gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~ 170 (469)
++++++|+++|+..++.++..+ +|.|+++.|+|+++...+....+. .+..++.+
T Consensus 95 ~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (392)
T 3ruy_A 95 MVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG---- 170 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT----
T ss_pred EEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc----
Confidence 9999999999999999887643 689999999998765544332121 24444432
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHH-HHHHHHHHHhcCeEEEEeccccccccCCCCccchhhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNE-LNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEI 249 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~-l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~ 249 (469)
|++++++++++ ++++|++++|+||||.+++.++ +++|.++|++||+++|+||+|+++.+.+... . ...
T Consensus 171 ---d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~-~~~ 239 (392)
T 3ruy_A 171 ---DLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-A-CDW 239 (392)
T ss_dssp ---CHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-G-GGG
T ss_pred ---cHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-h-hhc
Confidence 78999988863 8999999999999999996555 9999999999999999999998754444321 1 111
Q ss_pred hhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 250 LKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 250 ~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
.. ...+++ |+||+++ +| +|+||+++++ .+.+.+.... ..++.+++.+.++.++++... .
T Consensus 240 ~~--------~~~d~~---~~SK~l~-gG~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~-- 301 (392)
T 3ruy_A 240 DN--------VTPDMY---ILGKALG-GGVFPISCAAANR-DILGVFEPGSHGSTFGGNPLACAVSIAALEVLE---E-- 301 (392)
T ss_dssp GT--------CCCSEE---EECGGGG-TTTSCCEEEEECH-HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--
T ss_pred cC--------CCCCEE---EEchhhh-CChhhhEEEEECH-HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h--
Confidence 11 112333 7789986 57 9999999954 4433333222 223468888888888876432 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEKAG---ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~g---~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
++.+++++++++++.+.|++++ +....+.+ .|+++.++. . ..+++..++ ++||.+.||. ++
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-~~~~~~~~~--~------~~~l~~~l~-~~gi~v~~~~------~~ 365 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKG-LFIGIELNE--P------ARPYCEQLK-AAGLLCKETH------EN 365 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEET-TEEEEEESS--C------SHHHHHHHH-TTTEECCCBT------TT
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeee-eEEEEEEcc--h------HHHHHHHHH-HCCcEEecCC------CC
Confidence 5667788888999999998875 33444555 456666764 1 124666665 7799999874 57
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
++|++++. .+++++++++++|++++
T Consensus 366 ~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 366 VIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 89999765 48999999999999886
No 126
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=2.6e-29 Score=255.64 Aligned_cols=334 Identities=14% Similarity=0.092 Sum_probs=218.7
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCC---------CcHHHHHHHHHHHHhHcCCCCC
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYH---------GLPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~Lr~aia~~l~~~~~~~~~ 108 (469)
.+.+.|+.+.+..+++.+.+++.+.. .....|+... ...++++++|++++
T Consensus 17 ~~~~~Ld~~~~~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-------- 75 (432)
T 3a9z_A 17 NRKVYMDYNATTPLEPEVIQAVTEAM-------------KEAWGNPSSSYVAGRKAKDIINTARASLAKMIG-------- 75 (432)
T ss_dssp -CCEECBTTTCCCCCHHHHHHHHHHH-------------HHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred CCcEEeeCCccCCCCHHHHHHHHHHH-------------HHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 46799999888866676777666531 1122333211 13688999999885
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcCh-----------------HHHHhhhCCCEEEEe
Q 043923 109 FDTSKIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGF-----------------DRDLKWRTGVEIVPI 163 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~-----------------~~~~~~~~g~~~~~v 163 (469)
+++++|++|+|+++++..++.+++ ++||+|+++.|+|..+ ...+... |++++.+
T Consensus 76 ~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~-g~~v~~v 154 (432)
T 3a9z_A 76 GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQ-VAEVTFV 154 (432)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTT-SCEEEEE
T ss_pred CCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 567899999999999999999986 5899999999999876 2223334 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC----------eEEEEeccc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN----------IHLISDEIY 233 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~----------~~iI~Deay 233 (469)
|++.+ ++.+|++++++++++ ++++|++++|+||||.+++.++ |.++|++++ ++||+||+|
T Consensus 155 ~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~~---i~~l~~~~~~~~~~~~~~~~~livDea~ 224 (432)
T 3a9z_A 155 PVSKV-NGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMPISE---ISRRIKALNQIRAASGLPRVLVHTDAAQ 224 (432)
T ss_dssp CCCTT-TSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCCHHH---HHHHHHHHHHHHHHHTCCCCEEEEECTT
T ss_pred ecCcc-cCCcCHHHHHHhccC------CceEEEEECcccCcccccCHHH---HHHHHHhcCcccccccCCceEEEEEchh
Confidence 98742 456899999988764 7899999999999999999655 788888999 999999999
Q ss_pred cccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHH---------HhcccccC
Q 043923 234 SGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT---------KMSSFGLV 304 (469)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~---------~~~~~~~~ 304 (469)
+.. .. ..++... +..+++.|+||++| .|+||+++++......+. .....++.
T Consensus 225 ~~~---~~-~~~~~~~------------~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
T 3a9z_A 225 ALG---KR-RVDVEDL------------GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTE 285 (432)
T ss_dssp TTT---TS-CCCHHHH------------CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCC
T ss_pred hhC---Cc-ccChhhc------------CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCc
Confidence 742 11 1233222 22356889999875 469999997543111111 11122346
Q ss_pred cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee--cC-----CceEEEEEecccccccCChhHH
Q 043923 305 SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL--KS-----NAGLFCWVDMRHLLRSNTFEAE 376 (469)
Q Consensus 305 s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~-----~~g~~~~v~~~~~~~~~~~~~~ 376 (469)
+.+.+.++.+++... .+++++.+++++++++++.+.|+++ |+++. .+ ..+..+++.++... .+.
T Consensus 286 ~~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 357 (432)
T 3a9z_A 286 NTPMIAGLGKAADLV---SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ-----LRG 357 (432)
T ss_dssp CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT-----CCH
T ss_pred CHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC-----CcH
Confidence 677777666666432 3456788888999999999999885 65543 22 12335555555310 011
Q ss_pred HHHHHHHHHhCCeEEeCCCCCCCC------------------CCCeEEEEeecC-CHHHHHHHHHHHHHHHHhhcc
Q 043923 377 MELWKKIVYDVKLNISPGSSCHCT------------------EPGWFRVCFANM-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 377 ~~l~~~ll~~~GI~v~pg~~f~~~------------------~~~~iRi~~~~~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++...+ .||.+.+|..|... ..+++||+++.. +++++++++++|++++++.++
T Consensus 358 ~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 358 YMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1333332 38888887655321 137899999863 899999999999999887654
No 127
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=2.4e-30 Score=260.24 Aligned_cols=337 Identities=12% Similarity=0.050 Sum_probs=211.5
Q ss_pred CCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC----CCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD----YHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
++.+.|.|+.+.+..+++.+.+++.+....... .....|.. .....++++.+|++++ +++
T Consensus 17 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~ 80 (400)
T 3vax_A 17 RGSHMTYLDAAATTRVDQRVADIVLHWMTAEFG--------NAGSRHEYGIRAKRGVERAREYLASTVS--------AEP 80 (400)
T ss_dssp -----CCCCCCCCSSSCHHHHHHHHHHHHHHHS--------CSSCHHHHHHHHHHHHHHHHHHHHHHTT--------CCG
T ss_pred ccCCcEEecCCCCCCCCHHHHHHHHHHHHhccC--------CCcccchhHHHHHHHHHHHHHHHHHHcC--------CCC
Confidence 345678888777776666666666553110000 00001111 1224556666666654 567
Q ss_pred CcEEEeCChHHHHHHHHHHhc----CCCC-EEEEccCCCcChHHHHhhh--CCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLA----EPGE-AFLLPTPYYPGFDRDLKWR--TGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~----~~gd-~Vl~~~P~y~~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++|++|+|+++|+..++.+++ ++|| .|+++.+.|+.+...+... .|++++.+|++. ++.+|++++++++++
T Consensus 81 ~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 158 (400)
T 3vax_A 81 DELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRP 158 (400)
T ss_dssp GGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCT
T ss_pred CcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCC
Confidence 899999999999999999997 8999 9999999998876554431 399999999874 567899999988864
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
++++|++++|+||||.+++. ++|.++|++||++||+||+|+. .... .. + . .. ..
T Consensus 159 ------~~~~v~~~~~~nptG~~~~l---~~i~~la~~~~~~li~D~a~~~---~~~~-~~---~-~--------~~-~d 212 (400)
T 3vax_A 159 ------DTLLVSLMHVNNETGVIQPV---AELAQQLRATPTYLHVDAAQGY---GKVP-GD---L-T--------TP-ID 212 (400)
T ss_dssp ------TEEEEECCSBCTTTCBBCCH---HHHHHHHTTSSCEEEEECTTTT---TTSG-GG---G-G--------SC-CS
T ss_pred ------CceEEEEECCCCCceeeCcH---HHHHHHHHhcCCEEEEEhhhhc---CCCC-cC---h-h--------hc-Cc
Confidence 78999999999999999994 5688899999999999999973 2111 11 1 1 11 45
Q ss_pred EEEccCccccCCCcceEEEEE-ecCH-------HHHHHHH-----HhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIY-SNDD-------MVVAAAT-----KMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKK 331 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li-~~~~-------~~~~~~~-----~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 331 (469)
+++.|+||.+|.+| +|+++ ++++ .+..... .....++.+...+.++.+++.. ..+++++.++
T Consensus 213 ~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~ 287 (400)
T 3vax_A 213 MISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQWQV 287 (400)
T ss_dssp EEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHHHHH
T ss_pred EEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHHHHH
Confidence 78899999887555 56666 6552 1111110 0111233556666666555542 1345678888
Q ss_pred HHHHHHHHHHHHHHhcCCceecCCc---eEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--------
Q 043923 332 RLKQRHRKLVSGLEKAGISCLKSNA---GLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-------- 400 (469)
Q Consensus 332 ~l~~~~~~l~~~L~~~g~~v~~~~~---g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-------- 400 (469)
+++++++++.+.|+..|+++..+.+ +.++++.++.. +..++.+.|. +||.+++|..|...
T Consensus 288 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~ 358 (400)
T 3vax_A 288 AAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTLK--DLVAVATGSASTSASFTPSHVL 358 (400)
T ss_dssp HHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHH
T ss_pred HHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh--cCcEEEecccccCCCCCccHHH
Confidence 8999999999999833788776654 34667777631 1234566655 69999998765431
Q ss_pred -----C----CCeEEEEe-ec-CCHHHHHHHHHHHHHHHHh
Q 043923 401 -----E----PGWFRVCF-AN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 401 -----~----~~~iRi~~-~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
. ++++||++ +. .+++++++++++|++++++
T Consensus 359 ~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 359 RAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred HHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 48999999 65 4889999999999998764
No 128
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=8.9e-29 Score=249.43 Aligned_cols=332 Identities=16% Similarity=0.128 Sum_probs=221.8
Q ss_pred CCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++. ++.+.+++.+..... ......|+. ....++++.+++++ + .+
T Consensus 38 g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~---------~~~~~~~~~-~~~~~l~~~la~~~----~------~~ 97 (406)
T 4adb_A 38 GKEYIDFAGGIAVNALGHAHPELREALNEQASKF---------WHTGNGYTN-EPVLRLAKKLIDAT----F------AD 97 (406)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTC---------SCCCTTSCC-HHHHHHHHHHHHHS----S------CS
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhc---------ccccCCcCC-HHHHHHHHHHHhhC----C------CC
Confidence 44689999873 4442 455666655421100 001112322 22345555555543 2 56
Q ss_pred cEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCCCCcc
Q 043923 113 KIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSLNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~~~~ 172 (469)
+|++|+|+++|+..++.++.. +| |.|++++|+|+.+...+....+ ..+..+|.
T Consensus 98 ~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 170 (406)
T 4adb_A 98 RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY------- 170 (406)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------
T ss_pred eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------
Confidence 999999999999999998864 55 9999999999988655544412 24444443
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM--SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~--s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
.|++++++++++ ++++|+++ |+||||.++ +.+++++|+++|++||++||+||+|+++.+.+... .. ...
T Consensus 171 ~d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~-~~~ 241 (406)
T 4adb_A 171 NDINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AY-MHY 241 (406)
T ss_dssp TCHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HH-HHH
T ss_pred CcHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HH-Hhc
Confidence 378888887753 78888888 999999988 99999999999999999999999998754444321 11 121
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISE 328 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 328 (469)
. ...+++ ||||+++ +|+|+||++++++ +.+.+.... ..+..+++.+.++.++++.... ++
T Consensus 242 ~--------~~~d~~---t~sK~~~-~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~ 303 (406)
T 4adb_A 242 G--------VTPDLL---TTAKALG-GGFPVGALLATEE-CARVMTVGTHGTTYGGNPLASAVAGKVLELINT-----PE 303 (406)
T ss_dssp T--------CCCSEE---EECGGGG-TTSCCEEEEECHH-HHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-----HH
T ss_pred C--------CCCCEE---Eechhhc-CCCCeEEEEEcHH-HHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-----cC
Confidence 1 223333 6799999 9999999999544 444333322 2234678888888877754321 34
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 329 NKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 329 ~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
.+++++++++++.+.|++++ .....+..|+++|+.++.... .+..+++..++ ++||.+.|+. +++
T Consensus 304 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~-~~gi~v~~~~------~~~ 372 (406)
T 4adb_A 304 MLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAA-KAGVMVLIAG------GNV 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHH-HTTEECEESS------TTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHH-HCCcEEeecC------CCe
Confidence 55666667777777776642 111122245788898875321 12345667766 4599999864 678
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 405 FRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 405 iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|++++. .+++++++++++|++++++.++
T Consensus 373 iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 373 VRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9997655 4999999999999999987765
No 129
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.96 E-value=1.6e-29 Score=254.12 Aligned_cols=326 Identities=14% Similarity=0.105 Sum_probs=217.3
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++ +++.+.+++.+..... ......|+ .....++++.++++++ ++++
T Consensus 44 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~---------~~~~~~~~-~~~~~~l~~~la~~~~--------~~~~ 105 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETL---------MAMPQTLP-TPMRGEFYRTLTAILP--------PELN 105 (395)
T ss_dssp SCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC---------CCCCTTSC-CHHHHHHHHHHHHTSC--------TTEE
T ss_pred CCEEEEccCccccccCCCCCHHHHHHHHHHHHhC---------CCCccccC-CHHHHHHHHHHHHhcC--------CCcC
Confidence 34578998876 444 4456666665531100 00011232 2234566666666542 4678
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChH-HHHhhhCCCE------------EEEeeccCCCCcccCHHH
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFD-RDLKWRTGVE------------IVPIQCTSLNGFQITETA 177 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~-~~~~~~~g~~------------~~~v~~~~~~~~~~d~~~ 177 (469)
+|++++|+++|+..++.++. .+||.|++.+|+|+... ..+... |.+ +..++. .|+++
T Consensus 106 ~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~-g~~~~~~~~~p~~~~~~~~~~-------~d~~~ 177 (395)
T 1vef_A 106 RVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVT-WEPKYREPFLPLVEPVEFIPY-------NDVEA 177 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTC-CCHHHHGGGCSCSSCEEEECT-------TCHHH
T ss_pred EEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhc-CCcccccccCCCCCCeeEeCC-------CcHHH
Confidence 99999999999999998764 57889999999987643 344444 664 233331 37899
Q ss_pred HHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 256 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~ 256 (469)
+++++++ ++++|+++.++||||.++ +.+++++|.++|++||++||+||+|+++.+.+.. .+ .+...
T Consensus 178 l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~-~~-~~~~~----- 244 (395)
T 1vef_A 178 LKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKR-FA-FEHFG----- 244 (395)
T ss_dssp HHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-ST-HHHHT-----
T ss_pred HHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCch-hH-hhhcC-----
Confidence 9888763 788776655578999865 6888999999999999999999999964332321 11 12211
Q ss_pred cCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHH
Q 043923 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLK 334 (469)
Q Consensus 257 ~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~ 334 (469)
...+++ ||||+++ +|+|+||++++++ +.+.+.. ....+..+.+.+.++.++++... + ....++++
T Consensus 245 ---~~~d~~---s~sK~~~-~g~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~--~~~~~~~~ 311 (395)
T 1vef_A 245 ---IVPDIL---TLAKALG-GGVPLGVAVMREE-VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---R--TRLWERAA 311 (395)
T ss_dssp ---CCCSEE---EECGGGG-TTSSCEEEEEEHH-HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--HTTHHHHH
T ss_pred ---CCCCEE---EEccccc-CCCceEEEEehHH-HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH---h--CCHHHHHH
Confidence 112333 8899999 5999999999655 4443332 11223367778877777765321 1 34566777
Q ss_pred HHHHHHHHHHHhcCCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-
Q 043923 335 QRHRKLVSGLEKAGISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN- 411 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~- 411 (469)
++++++.+.|++++.++. .+..|+|+|++++.. ..++++.+++++||.+.|+ +++++||+++.
T Consensus 312 ~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~l~~~l~~~~gi~v~~~------~~~~iRi~~~~~ 377 (395)
T 1vef_A 312 ELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEK--------AAPYIARLEKEHRVLALQA------GPTVIRFLPPLV 377 (395)
T ss_dssp HHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSC--------SHHHHHHHHHHHCEECEES------STTEEEECCCTT
T ss_pred HHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh--------HHHHHHHHHHHCCeEEecC------CCCEEEEeCCCC
Confidence 888889999988754321 223457889988741 1246677763669999986 25789999864
Q ss_pred CCHHHHHHHHHHHHHHH
Q 043923 412 MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l 428 (469)
.+++++++++++|++++
T Consensus 378 ~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 378 IEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 58999999999999876
No 130
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=2.2e-29 Score=249.60 Aligned_cols=328 Identities=14% Similarity=0.080 Sum_probs=216.9
Q ss_pred CeeeeeccccccC-hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLS-FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
..+.+..++|+++ ++.+.+++.+. .....|++..+..+|++.++++++ . +..+++
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~--------------~~~~~~~~~~~~~~l~~~la~~~~--------~--~~~i~~ 69 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDN--------------LESDIYGNGAVIEDFETKIAKILG--------K--QSAVFF 69 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTT--------------CBCCBTTBSHHHHHHHHHHHHHHT--------C--SEEEEE
T ss_pred chhhcCCCccccCCCHHHHHHHHhh--------------cccCcccCCHHHHHHHHHHHHHhC--------C--CcEEEe
Confidence 4466777888885 35455554442 122356666678999999999985 2 223555
Q ss_pred CChHHHHHHHHHHhcCCCCE--EEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 118 AGATSANETLMFCLAEPGEA--FLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~--Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|+++++..++.+++.+||. |+++.+.|..+.. ..... |++++.++.+ ++.+|+++++++ . +++
T Consensus 70 ~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~-~------~~~ 138 (359)
T 3pj0_A 70 PSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQ-QITPLLLGTA---NQLLTIDDIKSL-R------EPV 138 (359)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHH-CCEEEECSCT---TSCCCHHHHHTC-S------SCC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhc-CceEEecCCc---CCCcCHHHHHhc-c------CCc
Confidence 88889999999999888886 5555555432221 12345 9999998863 457899998876 2 388
Q ss_pred eEEEEecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 193 KGVLVTNPSNPL-GTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 193 ~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
++|+++||+||+ |.+++.+++++|+++|++||++||+|++|........ ..+...+.. ...+++.|+|
T Consensus 139 ~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~~~~~----------~~d~~~~s~s 207 (359)
T 3pj0_A 139 SSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFY-QKSAEEICA----------LFDSVYVSFY 207 (359)
T ss_dssp SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHH-TCCHHHHHT----------TCSEEEEESS
T ss_pred eEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhh-CCCHHHhhc----------cCCEEEEecc
Confidence 999999999998 7999999999999999999999999999864221110 012333322 2234456999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhc-cc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMS-SF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
|+++.+ .+ ||++++ +.+.+.+.... .+ .......+.++...+. +.. +..+++.++++++.+.|+++
T Consensus 208 K~~~~~-~g-g~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~------~~~-~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 208 KGIGGI-AG-AILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYFE------KRI-GKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp STTCCS-SC-EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH------HHG-GGHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCc-ce-EEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH------HHH-HHhHHHHHHHHHHHHHHhhC
Confidence 999755 33 777775 44544444322 11 1112222222222332 222 23344667788899999988
Q ss_pred -CCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec----CCHHHHHHHH
Q 043923 348 -GISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN----MSEDTLKLSM 421 (469)
Q Consensus 348 -g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~----~~~e~i~~~l 421 (469)
|+++. .+..++|+|+.++.... .+..++.+.+ .++||.++||..|+..+.+++|++++. .+.+++++++
T Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l 352 (359)
T 3pj0_A 278 SGVKTVPEVPVSNMFHVYFENSAD----EIGAILTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVF 352 (359)
T ss_dssp TTEEEESSSCSSSEEEEEESSCHH----HHHHHHHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHH
T ss_pred CCceeeccCCcceEEEEEecCccc----hhHHHHHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHH
Confidence 88875 45666788888763210 1223444554 567999999988776556799999863 3789999999
Q ss_pred HHHHHH
Q 043923 422 QRLKAF 427 (469)
Q Consensus 422 ~~L~~~ 427 (469)
++|.+.
T Consensus 353 ~~l~~~ 358 (359)
T 3pj0_A 353 RCLEKE 358 (359)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999875
No 131
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=6.6e-29 Score=246.09 Aligned_cols=324 Identities=10% Similarity=0.082 Sum_probs=214.3
Q ss_pred eeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHH
Q 043923 43 MGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATS 122 (469)
Q Consensus 43 L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~ 122 (469)
|+.+.++...+.+.+++...... .....|++..+..+|++++|++++ . +..++++|+++
T Consensus 15 l~~~~~p~~~~~~~~~~~~~~~~-----------~~~~~y~~~~~~~~l~~~la~~~~--------~--~~~i~~~~G~~ 73 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAAVADE-----------MASDQYGTGAIIEPFEQKFADVLG--------M--DDAVFFPSGTM 73 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTTSCTT-----------CBCEETTEETTHHHHHHHHHHHHT--------C--SEEEEESCHHH
T ss_pred cccCCCCCCHHHHHHHHHHhhcc-----------cCcccccCChHHHHHHHHHHHHhC--------C--CcEEEecCcHH
Confidence 45555555556666665542100 123457776788999999999986 2 33455577788
Q ss_pred HHHHHHHHhcCCCC--EEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 123 ANETLMFCLAEPGE--AFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 123 al~~~~~~l~~~gd--~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
++..++.+++.+|| .|+++.++|..+.. ..... |++++.++.+ ++.+|+++++++ +++++|++
T Consensus 74 a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~--------~~~~~v~~ 141 (357)
T 3lws_A 74 AQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELH-PIETILVGAA---DRLMTLDEIKAL--------PDIACLLL 141 (357)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHS-SCEEEECSCT---TSCCCHHHHHTC--------CSCSEEEE
T ss_pred HHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhcc-CcEEEEecCC---CCCcCHHHHhcC--------cCcceEEE
Confidence 99999999988888 67777666543322 23444 9999988842 346899998875 14889999
Q ss_pred ecCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEecccccc--ccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 198 TNPSNPL-GTTMSRNELNLLVNIITEKNIHLISDEIYSGT--VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 198 ~~P~NPt-G~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
++|+||| |.+++.+++++|+++|++||++||+||+|... .+.+. +...+.. ..+ +++.|+||+|
T Consensus 142 ~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~--------~~d--~~~~s~sK~~ 208 (357)
T 3lws_A 142 ELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEK---TAAEIAG--------LFD--SIYISFYKGL 208 (357)
T ss_dssp ESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC---CHHHHHT--------TSS--EEEEESSSTT
T ss_pred EcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCC---ChHHHHh--------cCC--EEEEeccccC
Confidence 9999998 99999999999999999999999999998621 11122 2333322 123 3478999999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhcc-cc---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSS-FG---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI 349 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~-~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~ 349 (469)
+.++. ||+++++. +.+.+..... +. ....+.+.++...+.+ +.+. .+++.++++++.+.|+++ |+
T Consensus 209 ~~~~g--g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~-~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 209 GGIAG--AILAGPAA-FCQTARIWKRRYGGDLISLYPYIVSADYYYEL------RKDR-MGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp CCSSC--EEEEECHH-HHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH------HTTC-HHHHHHHHHHHHHHHHTSTTE
T ss_pred CCCce--EEEEcCHH-HHHHHHHHHHHhcCCcccchHHHHHHHHHHHH------HHHH-HHHHHHHHHHHHHHHHhCCCC
Confidence 42332 99998554 4444433221 11 1223333333333322 2222 233566778899999988 88
Q ss_pred cee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec----CCHHHHHHHHHHH
Q 043923 350 SCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN----MSEDTLKLSMQRL 424 (469)
Q Consensus 350 ~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~----~~~e~i~~~l~~L 424 (469)
++. .+.+++|+|++++.... .+..++.+. +.++||.++||..|. .+.+++|++++. .+++++++++++|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l 352 (357)
T 3lws_A 279 HTTPEVPVSNMFHLHFDGQAA----DISPKLEQV-QEETGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARL 352 (357)
T ss_dssp EEESSSCSSSEEEEEEESCHH----HHHHHHHHH-HHHHCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHH
T ss_pred eeccCCCcceEEEEEecCChH----HHHHHHHHH-HHhcCeEEecccccC-CCceEEEEEecchhhhcCHHHHHHHHHHH
Confidence 873 46667899999874210 112344444 456799999997665 344589999863 3789999999999
Q ss_pred HHHH
Q 043923 425 KAFV 428 (469)
Q Consensus 425 ~~~l 428 (469)
.+++
T Consensus 353 ~~al 356 (357)
T 3lws_A 353 RQAF 356 (357)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8765
No 132
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.96 E-value=2.9e-28 Score=249.57 Aligned_cols=351 Identities=12% Similarity=0.054 Sum_probs=218.8
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||++.+ .+++. ++.+.+++.+... ... +....+..+++.++++++.+.++ ...
T Consensus 47 ~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~-------------~~~-~~~~~~~~~~~~~la~~l~~~~~----~~~ 108 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQ-------------TLS-YFPMSQSHEPAIKLAEKLNEWLG----GEY 108 (452)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHT-------------TCC-CCCTTSEEHHHHHHHHHHHHHHT----SCE
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hcC-CcccccCCHHHHHHHHHHHHhCC----CCc
Confidence 34568999987 45553 4666666655311 111 11122445666666666665544 344
Q ss_pred CcEEEeCChHHHHHHHHHHhc-----C---CCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCc
Q 043923 112 SKIVLTAGATSANETLMFCLA-----E---PGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGF 171 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~-----~---~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~ 171 (469)
+ |++|+|+++|+..+++.+. . +++.|++.+|+|+++........|. .+..++......+
T Consensus 109 ~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (452)
T 3n5m_A 109 V-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRM 187 (452)
T ss_dssp E-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTS
T ss_pred e-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccC
Confidence 5 9999999999999999987 5 7899999999998876444332121 2333332110111
Q ss_pred cc-C---------HHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 172 QI-T---------ETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 172 ~~-d---------~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
.. | +++|++++++. ...++++|+++.+ +| ||.++ +.+.+++|.++|++||+++|+||+|.++...
T Consensus 188 ~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~ 264 (452)
T 3n5m_A 188 PGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRT 264 (452)
T ss_dssp TTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcc
Confidence 11 1 78898888721 1126777777766 79 99766 8888999999999999999999999985433
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH---h-----cccccCcHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK---M-----SSFGLVSSQTQY 310 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~---~-----~~~~~~s~~~q~ 310 (469)
+..+ . .+... .... +.||||+++ .| +|+||++++ +.+.+.+.. . ...+..+++++.
T Consensus 265 g~~~-~-~~~~~--------~~~d---i~t~sK~l~-~G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a 329 (452)
T 3n5m_A 265 GKAF-G-FMNYD--------VKPD---IITMAKGIT-SAYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFGGNPAACA 329 (452)
T ss_dssp SSSS-G-GGGTT--------CCCS---EEEECGGGG-TTSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSSTTCHHHHH
T ss_pred cccc-h-hhhcC--------CCCC---EEeeccccc-CCCcceEEEEEC-HHHHHHHhhccCCCCccccCCCCCCHHHHH
Confidence 3321 1 11111 1122 337999998 59 999999995 445444422 1 122346788888
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH----hcC-CceecCCceEEEEEecccccccCC---hhHHHHHHHH
Q 043923 311 LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLE----KAG-ISCLKSNAGLFCWVDMRHLLRSNT---FEAEMELWKK 382 (469)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~----~~g-~~v~~~~~g~~~~v~~~~~~~~~~---~~~~~~l~~~ 382 (469)
++.++|+.... +...++++++.+++.+.|+ +++ +....+.+ .|+++.+........ .....+++..
T Consensus 330 aa~aal~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 403 (452)
T 3n5m_A 330 LALKNLEIIEN-----ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGIELVNDKETKEPIDNDKIASVVNA 403 (452)
T ss_dssp HHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEEEEEEETTTTEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCCcccCCCCHHHHHHHHHH
Confidence 88887763221 1223333334444444444 333 33344444 677777643211110 0112345566
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
++ ++||.+.|+..|....++++||+++. .+++++++++++|++++++
T Consensus 404 l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 404 CK-EKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp HH-HTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HH-HCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 55 56999999988766567899998765 4999999999999999864
No 133
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=5.3e-28 Score=243.54 Aligned_cols=281 Identities=16% Similarity=0.161 Sum_probs=197.2
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIV 161 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~ 161 (469)
....+|++.++++++ .+ ++++++++++|+..++.+++++||.|+++.|+|.++...+ ... |++++
T Consensus 64 ~~~~~l~~~la~~~g--------~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~~~ 132 (398)
T 2rfv_A 64 PTTDALEKKLAVLER--------GE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKF-GINVR 132 (398)
T ss_dssp HHHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHT-TCEEE
T ss_pred hHHHHHHHHHHHHhC--------CC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHc-CCEEE
Confidence 356778888888774 22 5555566669999999999999999999999999887766 555 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|+...+..
T Consensus 133 ~v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 195 (398)
T 2rfv_A 133 FVDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ- 195 (398)
T ss_dssp EECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EeCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 99864 78889888764 7899999999999999998 6678999999999999999998654321
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhc-cc--ccCcHHHHHHHHHHhc
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMS-SF--GLVSSQTQYLLSALLS 317 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~-~~--~~~s~~~q~~~~~~l~ 317 (469)
...+ +.++++.|+||+++.+|+|+ ||++++++.+.+.+.... .+ +..+++.+.++.+.++
T Consensus 196 ----~~~~------------~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (398)
T 2rfv_A 196 ----PLQL------------GADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVK 259 (398)
T ss_dssp ----GGGG------------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred ----chhh------------CCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence 1111 46788999999998899998 999997655543343322 22 3467788888888886
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CceecC---CceEEEEEecccccccCChhHHHHH
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAG---------------ISCLKS---NAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---------------~~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
.. . ...+.+.++.+.+.+.|++++ +++..+ ..|.++++++++. . +.
T Consensus 260 ~~---~----~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~------~---~~ 323 (398)
T 2rfv_A 260 TL---G----IRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG------L---EA 323 (398)
T ss_dssp TH---H----HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH------H---HH
T ss_pred hH---H----HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC------H---HH
Confidence 52 2 223334455566666776542 222222 1345666687631 0 11
Q ss_pred HHHHHHh---CCeEEeCCCCCC---------------------CCCCCeEEEEeecC-CHHHHHHHHHHHHH
Q 043923 380 WKKIVYD---VKLNISPGSSCH---------------------CTEPGWFRVCFANM-SEDTLKLSMQRLKA 426 (469)
Q Consensus 380 ~~~ll~~---~GI~v~pg~~f~---------------------~~~~~~iRi~~~~~-~~e~i~~~l~~L~~ 426 (469)
...++++ .||.+.+|..|. ...++++||+++.. ++++++.+.++|++
T Consensus 324 ~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 324 GRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 2333433 388888886642 01267999999863 56666666666654
No 134
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=1.2e-28 Score=248.41 Aligned_cols=327 Identities=13% Similarity=0.181 Sum_probs=228.3
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEe
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t 117 (469)
.++|||+.++++++ +.+.+++.+. +. ...|++..+..+|++++|++++ . ++++++
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~-------------~~-~~~y~~~~~~~~l~~~la~~~~--------~--~~~v~~ 84 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARV-------------LD-SGRYLLGPELEGFEAEFAAYCE--------T--DHAVGV 84 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHH-------------HH-HTCCSSSHHHHHHHHHHHHHTT--------S--SEEEEE
T ss_pred CcccccCcCCCCCC-HHHHHHHHHH-------------Hh-cCCCCCchhHHHHHHHHHHHHC--------C--CeEEEe
Confidence 36899999998876 4555555542 11 1256666778999999999985 2 267777
Q ss_pred CChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 118 AGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 118 ~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+|+++|+..++.++ +++||.|+++.|+|..+...+... |++++.+++++ +++.+|++++++++++ ++++|+
T Consensus 85 ~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~ 156 (399)
T 2oga_A 85 NSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSAT-GATPVPVEPHE-DHPTLDPLLVEKAITP------RTRALL 156 (399)
T ss_dssp SCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCS-SSSSBCHHHHHHHCCT------TEEEEC
T ss_pred cCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHC-CCEEEEEecCC-CCCCcCHHHHHHhcCC------CCeEEE
Confidence 88899999999999 899999999999999999888877 99999999874 3577999999988864 677666
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccchhhhhhccccccCCcCCeEEEEccC--ccc
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL--SKD 273 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~--SK~ 273 (469)
|+||||.+.+ +++|.++|+++|+++|+||+|+.+. +++. . + . .. ..+++.|+ ||.
T Consensus 157 ---~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~---~-~--------~~-~di~~~S~~~sK~ 214 (399)
T 2oga_A 157 ---PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGR---R---I-G--------AG-SSVAAFSFYPGKN 214 (399)
T ss_dssp ---CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTE---E---T-T--------CT-TCEEEEECCTTSS
T ss_pred ---EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCe---e---c-c--------cc-cCEEEEeCCCCcc
Confidence 5789999987 5668889999999999999998542 2211 1 1 0 11 24777888 799
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhccc--------------ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHH
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSF--------------GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRK 339 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~ 339 (469)
+|.+| |+||++++++.+.+.+...... +.++.+.+.++.+.+... +...++.++..++
T Consensus 215 ~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~-------~~~~~~~~~~~~~ 286 (399)
T 2oga_A 215 LGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL-------DSWNGRRSALAAE 286 (399)
T ss_dssp SCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH-------HHHHHHHHHHHHH
T ss_pred CCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 99779 9999999756665544433221 124566666665555432 2333444555677
Q ss_pred HHHHHHhc-CCcee-cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-----------CC------
Q 043923 340 LVSGLEKA-GISCL-KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-----------CT------ 400 (469)
Q Consensus 340 l~~~L~~~-g~~v~-~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-----------~~------ 400 (469)
+.+.|+++ |+++. .+..+.++|+.++-.. .+..++.+.|. ++||.++++.... ..
T Consensus 287 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~ 360 (399)
T 2oga_A 287 YLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT-----ERRDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPR 360 (399)
T ss_dssp HHHHTTTCTTCBCCCCCTTEECCCSSEEEEC-----SSHHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHH
T ss_pred HHHHhccCCCccccCCCCCCcceeEEEEEEC-----CCHHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChh
Confidence 88888876 66654 2445566653332111 01234556654 6799998753210 00
Q ss_pred ----CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 401 ----EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 401 ----~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..+++||++.. .+++++++++++|++++++.++
T Consensus 361 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~~ 398 (399)
T 2oga_A 361 AESFARQVLSLPIGPHLERPQALRVIDAVREWAERVDQ 398 (399)
T ss_dssp HHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 02579999975 4999999999999999886543
No 135
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=1.7e-28 Score=250.37 Aligned_cols=350 Identities=15% Similarity=0.089 Sum_probs=218.7
Q ss_pred CCCCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||++.+.+ ++ .++.+.+++.+. +.....|+...+..++++++++++.+.++ ...
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~la~~~~----~~~ 103 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAA-------------AANPAGATILSASNAPAVTLAERLLASFP----GEG 103 (439)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHH-------------HHSCSCSCSSSSEEHHHHHHHHHHHHTTT----CTT
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHH-------------HHhccCccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 3456899998866 33 345666666542 12223454445667888888888877653 234
Q ss_pred -CcEEEeCChHHHHHHHHHHh--cCCCCEEEEccCCCcChHHHHhhhCCCEE--------------EEeeccCCCCccc-
Q 043923 112 -SKIVLTAGATSANETLMFCL--AEPGEAFLLPTPYYPGFDRDLKWRTGVEI--------------VPIQCTSLNGFQI- 173 (469)
Q Consensus 112 -~~i~~t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~--------------~~v~~~~~~~~~~- 173 (469)
++|++++|+++|+..++.++ ..+++.|++.+|.|+++...+....|... ..+|.+. .+..
T Consensus 104 ~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 181 (439)
T 3dxv_A 104 THKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDP 181 (439)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBT
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--ccccc
Confidence 79999999999999999885 23567888889988766544433313322 2233221 1111
Q ss_pred ----CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 174 ----TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 174 ----d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
|+++|++++++ ....++++|+++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+.. ...+
T Consensus 182 ~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~--~~~~ 257 (439)
T 3dxv_A 182 TGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL--HCFE 257 (439)
T ss_dssp TSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS--SGGG
T ss_pred cHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh--hHHH
Confidence 68888888841 11226777777777788888665 555999999999999999999999874333321 1112
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
... ...+++ ||||++| +|+|+||+++++ .+.+.+... ...+ .+++++.++.++++....
T Consensus 258 ~~~--------~~~di~---s~sK~~~-~G~riG~~~~~~-~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~----- 318 (439)
T 3dxv_A 258 HEG--------FVPDIL---VLGKGLG-GGLPLSAVIAPA-EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR----- 318 (439)
T ss_dssp GTT--------CCCSEE---EECGGGG-TTSCCEEEEEEH-HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-----
T ss_pred hcC--------CCCCEE---EEcchhc-CCcceEEEEECH-HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-----
Confidence 211 112333 9999999 799999999954 444433322 2234 677888887777753221
Q ss_pred HHHHHHHHHHHHHHHHHHH----hcC-CceecCCceEEEEEeccccccc--CChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLE----KAG-ISCLKSNAGLFCWVDMRHLLRS--NTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~----~~g-~~v~~~~~g~~~~v~~~~~~~~--~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
+...++++++++++.+.|. +++ +...++. |.|+|+.+...... .......+++..+++ +||.+.|+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~-- 394 (439)
T 3dxv_A 319 DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR-GLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVGMN-- 394 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEESTT--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecCCC--
Confidence 1223333334444444443 333 2333444 56788877321100 011234456677765 49999998532
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 400 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 400 ~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+++||+++. .+++++++++++|++++++..+
T Consensus 395 --~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 395 --GNVLEFTPPLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp --SCEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4789998765 4999999999999999987755
No 136
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=2.7e-28 Score=245.23 Aligned_cols=332 Identities=14% Similarity=0.085 Sum_probs=216.2
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .++++ ++.+.+++.+... ... |....+..++++++++++.+.++ ++
T Consensus 35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-------------~~~-~~~~~~~~~~~~~l~~~la~~~~------~~ 94 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVD-------------KLL-HTSNLYYNENIAAAAKNLAKASA------LE 94 (395)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHT-------------TCS-CCCTTSBCHHHHHHHHHHHHHHT------CS
T ss_pred CCEEEECCCcHHhccCCCCCHHHHHHHHHHHH-------------hcc-ccccccCCHHHHHHHHHHHHhcC------CC
Confidence 4568999988 66664 4666666655311 111 11111234555666666655433 68
Q ss_pred cEEEeCChHHHHHHHHHHhc-------CCCCEEEEccCCCcChHHHHhhhC------------CCEEEEeeccCCCCccc
Q 043923 113 KIVLTAGATSANETLMFCLA-------EPGEAFLLPTPYYPGFDRDLKWRT------------GVEIVPIQCTSLNGFQI 173 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~-------~~gd~Vl~~~P~y~~~~~~~~~~~------------g~~~~~v~~~~~~~~~~ 173 (469)
+|++++|+++|+..++.++. .++|.|++.+|+|+++...+.... +.++..++.+
T Consensus 95 ~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 167 (395)
T 3nx3_A 95 RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN------- 167 (395)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-------
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-------
Confidence 99999999999999998875 457999999999987754433221 2345555432
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhc
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKD 252 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~ 252 (469)
|++++++++++ ++++|++..++|++|.. ++.+++++|.++|++||+++|+||+|.++...+.. ... ...
T Consensus 168 d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~-~~~-- 237 (395)
T 3nx3_A 168 DISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF-FAY-EHA-- 237 (395)
T ss_dssp CHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGG-GGG--
T ss_pred CHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc-hhH-Hhc--
Confidence 68889888753 77887777777777765 78888999999999999999999999875333321 111 111
Q ss_pred cccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 253 RNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 253 ~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
+....+.|+||++| +|+|+||++++++.+.+.+.... ..+..+++++.++.++|+.... .++.++.+
T Consensus 238 ---------~~~~d~~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~ 306 (395)
T 3nx3_A 238 ---------QILPDIMTSAKALG-CGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVN 306 (395)
T ss_dssp ---------TCCCSEEEECGGGT-TTSCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred ---------CCCCCEEEeccccc-CCCceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHH
Confidence 11122347999998 69999999996554244443321 2234688888888877763211 12233333
Q ss_pred HHHHHHHHHHHHHHHhcC-CceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 331 KRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+..+..++.+.+.+.++. +...++. |+|+|+.++... +..+++..++ ++||.+.|+. ++++|+++
T Consensus 307 ~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~------~~~~~~~~l~-~~Gi~v~~~~------~~~iRi~~ 372 (395)
T 3nx3_A 307 KLTPYLEQSLDELINEFDFCKKRKGL-GFMQGLSLDKSV------KVAKVIQKCQ-ENALLLISCG------ENDLRFLP 372 (395)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEECTTS------CHHHHHHHHH-HTTEECEEET------TTEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeE-EEEEEEEeCCcc------hHHHHHHHHH-HCCCEEecCC------CCEEEEEC
Confidence 333444444555444443 2333333 478888887521 2235666665 5699999873 57899997
Q ss_pred ec-CCHHHHHHHHHHHHHHHHh
Q 043923 410 AN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 410 ~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+. .+++++++++++|++++++
T Consensus 373 ~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 373 PLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHh
Confidence 66 4999999999999999864
No 137
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1.4e-27 Score=241.42 Aligned_cols=347 Identities=11% Similarity=0.031 Sum_probs=222.0
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
+.|+|..++|+.++ .+.+++.+..... . + ........|.......++++.+.+.+.+.++ +++++|++++
T Consensus 26 ~~i~l~~~~~~~~~-~v~~a~~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~~~~~i~~~s 95 (417)
T 3n0l_A 26 EGLEMIASENFTLP-EVMEVMGSILTNK-Y---A-EGYPGKRYYGGCEFVDEIETLAIERCKKLFN----CKFANVQPNS 95 (417)
T ss_dssp HSEECCTTCCCCCH-HHHHHHTBGGGGC-C---C-CEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cCeeeecccCCCCH-HHHHHHhhhhhcc-c---c-ccCCCccccccchHHHHHHHHHHHHHHHHhC----CCCcceEecc
Confidence 56999999988754 4555555421000 0 0 0001112233333445666655555555544 5677788888
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
| ++|+..++.+++++||+|+++.|+|..+.. .+... .+..+++++.+ .++.+|++++++++++. ++++
T Consensus 96 G-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~ 167 (417)
T 3n0l_A 96 G-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKL 167 (417)
T ss_dssp H-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSE
T ss_pred H-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeE
Confidence 8 799999999999999999999999987644 22222 14556666665 56779999999999742 7888
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKD 273 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 273 (469)
|++++|+| |.+++ +++|.++|++||++||+||+|. +..+.+..... .....+++.|+||+
T Consensus 168 v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--------------~~~~di~~~s~sK~ 228 (417)
T 3n0l_A 168 IVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSP--------------FPYAHVVSSTTHKT 228 (417)
T ss_dssp EEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCC--------------TTTCSEEEEESSTT
T ss_pred EEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCc--------------cccceEEEeeCccc
Confidence 88888886 77888 6679999999999999999964 33333321111 11245788999998
Q ss_pred cCCCcceEEEEEecCHHHHHHHHHhcccc---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 043923 274 LGLPGFRVGAIYSNDDMVVAAATKMSSFG---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGIS 350 (469)
Q Consensus 274 ~g~~GlRiG~li~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~ 350 (469)
+ +|+|+||++++++.+.+.+......+ ..+...+.++..++... ..+.++..++++.++++++.+.|.+.|++
T Consensus 229 l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 304 (417)
T 3n0l_A 229 L--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNAQVLANVLMDRKFK 304 (417)
T ss_dssp T--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred c--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhCCce
Confidence 7 78889999997566665555443222 22333433433333221 12345677788888889999999988888
Q ss_pred eec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC----CCCCeEEEEeec-----CCHHHHHHH
Q 043923 351 CLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC----TEPGWFRVCFAN-----MSEDTLKLS 420 (469)
Q Consensus 351 v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~----~~~~~iRi~~~~-----~~~e~i~~~ 420 (469)
+.. +..++++|+.++... .+. +.+.++++++||.+.++..+.. ..++.+|+++.. +++++++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~ 378 (417)
T 3n0l_A 305 LVSDGTDNHLVLMSFLDRE-----FSG-KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIV 378 (417)
T ss_dssp EGGGSCSSSEEEEECTTSS-----SCH-HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred eccCCCCceEEEEEcccCC-----CCH-HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHH
Confidence 765 234568888876311 011 2344556688999987653322 124579999853 367999999
Q ss_pred HHHHHHHHHhhc
Q 043923 421 MQRLKAFVDSIT 432 (469)
Q Consensus 421 l~~L~~~l~~~~ 432 (469)
+++|++++++..
T Consensus 379 ~~~l~~~l~~~~ 390 (417)
T 3n0l_A 379 SNYIADILDDVN 390 (417)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhccc
Confidence 999999998654
No 138
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.7e-28 Score=243.01 Aligned_cols=288 Identities=14% Similarity=0.102 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh-HHHHhhhCCCEEEEeeccC
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF-DRDLKWRTGVEIVPIQCTS 167 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~~~~~~g~~~~~v~~~~ 167 (469)
.++.+.+.+.+.+.++ . .++++|++|+|+++|+..++.++.++ +.+++..|.|... ...+... |++++.++.+
T Consensus 42 ~~~~~~~~~~la~~~g--~-~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~-g~~~~~v~~~- 115 (362)
T 3ffr_A 42 EEVYKTASDNLKTLLE--L-PSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAGEL-GREAYKEEAA- 115 (362)
T ss_dssp HHHHHHHHHHHHHHTT--C-CTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHHHT-TCEEEEEECC-
T ss_pred HHHHHHHHHHHHHHhC--C-CCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHHHh-CCCeEEEecC-
Confidence 3555555555555544 1 14678999999999999999999888 6666666666622 3345555 9999999986
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc-CeEEEEeccccccccCCCCccch
Q 043923 168 LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK-NIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 168 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~-~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.++.+|+++++ ++ +++++|++++|+||||.+++ +++|.++|++| |+++|+|++|+. .... ..
T Consensus 116 -~~~~~d~~~l~--~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~---~~~~-~~- 178 (362)
T 3ffr_A 116 -FGKGFYPADIT--VP------ADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSL---PYPK-FD- 178 (362)
T ss_dssp -TTCCCCGGGCC--CC------TTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTT---TSSC-CC-
T ss_pred -CCCCCCHHHHh--cc------CCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEeccccc---CCcc-cC-
Confidence 35678988887 32 38999999999999999999 55588889999 999999999973 2211 11
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhcc-----------------------cc
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMSS-----------------------FG 302 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~~-----------------------~~ 302 (469)
+ ....+++.|+||+++ .+| +|+++++++.+ +.+..... .+
T Consensus 179 --~-----------~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~-~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 242 (362)
T 3ffr_A 179 --W-----------TKIDSVFFSVQKCFGLPAG--LGVWILNDRVI-EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPE 242 (362)
T ss_dssp --T-----------TSCSEEEEETTSTTCCCSC--CEEEEEEHHHH-HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSS
T ss_pred --h-----------hHCcEEEEecccccCCCCc--eEEEEECHHHH-HHhhhccccCCCCcccccHHHHHHHhhcCCCCC
Confidence 1 124578899999998 677 46777755443 33332221 34
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CceEEEEEecccccccCChhHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~ 377 (469)
+.+...+.++..++.... ...+++.+++++++++++.+.|+++ |+++.++ .++.++|+.++. +..
T Consensus 243 ~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~ 312 (362)
T 3ffr_A 243 TPNAMNIFLLGKVTGDML--QISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------LPG 312 (362)
T ss_dssp CCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------CHH
T ss_pred CchHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------CHH
Confidence 466666666666654211 1125677888888999999999998 8877652 245678888774 123
Q ss_pred HHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
++.+.|.+ +||.+.+|..+ ..++++||+++. .+++++++++++|++++
T Consensus 313 ~~~~~l~~-~gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 313 EINKILEP-FDMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHHHGG-GTEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-CCeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 56666664 49999998543 346799999975 48999999999998864
No 139
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=5.9e-28 Score=244.96 Aligned_cols=330 Identities=15% Similarity=0.100 Sum_probs=218.0
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++ +++.+.+++.+..+ ....++. .+..++++++++.+.+.++ .+
T Consensus 56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~-------------~~~~~~~-~~~~~~~~~l~~~la~~~g------~~ 115 (420)
T 2pb2_A 56 GKEYIDFAGGIAVTALGHCHPALVEALKSQGE-------------TLWHTSN-VFTNEPALRLGRKLIDATF------AE 115 (420)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHT-------------TCCCCCT-TSCCHHHHHHHHHHHHHSS------CS
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hcccccC-ccCCHHHHHHHHHHHhhCC------CC
Confidence 34689998773 454 34666666655311 1111111 1123555566666555432 58
Q ss_pred cEEEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCCCE------------EEEeeccCCCCcc
Q 043923 113 KIVLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTGVE------------IVPIQCTSLNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~~~ 172 (469)
+|++++|+++|+..++.++.. +| +.|++.+|+|+++...+....|.+ +..+|.
T Consensus 116 ~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------- 188 (420)
T 2pb2_A 116 RVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------- 188 (420)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------
Confidence 999999999999999998865 67 489999999987654432222543 445543
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
.|++++++++++ ++++|++++++|++|. +++.+++++|.++|++||+++|+||+|.++.+.+.. .. .+...
T Consensus 189 ~d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~-~~-~~~~~ 260 (420)
T 2pb2_A 189 NDLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL-FA-YMHYG 260 (420)
T ss_dssp TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SH-HHHHT
T ss_pred CCHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH-HH-HHhcC
Confidence 278899888764 7888888777888884 699999999999999999999999999875443332 11 12211
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
...+++ ||||++| +|+|+||++++++ +.+.+.. ....+..+++++.++.++|+.... +..
T Consensus 261 --------~~~dii---t~sK~l~-~G~~iG~~~~~~~-l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-----~~~ 322 (420)
T 2pb2_A 261 --------VTPDIL---TSAKALG-GGFPVSAMLTTQE-IASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-----PEV 322 (420)
T ss_dssp --------CCCSEE---EECGGGG-TTSCCEEEEECHH-HHTTCC----CCEECCCHHHHHHHHHHHHHHSS-----HHH
T ss_pred --------CCCCeE---Eeccccc-CCCceEEEEEhHH-HHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-----ccH
Confidence 123333 7899999 9999999999654 4433322 112234678888887777654321 234
Q ss_pred HHHHHHHHHHHHHHHHhc--CC---ceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 330 KKRLKQRHRKLVSGLEKA--GI---SCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~--g~---~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
.++++++++++.+.|+++ ++ ...++. |+|+|++++.... .+..++++.++ ++||.+.|+. +++
T Consensus 323 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~----~~~~~l~~~l~-~~Gi~v~~~~------~~~ 390 (420)
T 2pb2_A 323 LQGIHTKRQQFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKYK----GRARDFLYAGA-EAGVMVLNAG------ADV 390 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGGT----TCHHHHHHHHH-HTTEECEESS------TTE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCch----HHHHHHHHHHH-HCCCEEEeCC------CCE
Confidence 555666667777777654 22 223343 5788888864210 12335667766 4799999873 568
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 405 FRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 405 iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+|++++. .+++++++++++|++++++.
T Consensus 391 iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 391 MRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999764 59999999999999998753
No 140
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.96 E-value=1.4e-27 Score=242.71 Aligned_cols=339 Identities=14% Similarity=0.074 Sum_probs=216.7
Q ss_pred CCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..++|++.+. +++ +++.+.+++.+...... ......|+.. ...+++++++++++ +++++
T Consensus 43 ~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--------~~~~~~~~~~-~~~~l~~~la~~~~--------~~~~~ 105 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--------HVMFGGITHA-PAIELCRKLVAMTP--------QPLEC 105 (429)
T ss_dssp CEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--------CCCCSSEECH-HHHHHHHHHHHHSC--------TTCCE
T ss_pred CEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--------cccccccCCH-HHHHHHHHHHHhCC--------CCCCE
Confidence 4578998876 444 34666666655311000 0001133321 23556666666553 46899
Q ss_pred EEEeCChHHHHHHHHHHhc---C----CCCEEEEccCCCcChHHHHhhhC---------------CCEEEEeeccC-CCC
Q 043923 114 IVLTAGATSANETLMFCLA---E----PGEAFLLPTPYYPGFDRDLKWRT---------------GVEIVPIQCTS-LNG 170 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~---~----~gd~Vl~~~P~y~~~~~~~~~~~---------------g~~~~~v~~~~-~~~ 170 (469)
|++|+|+++|+..++.++. + |||.|++.+|+|+++...+.... ++..++++... ++.
T Consensus 106 v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (429)
T 1s0a_A 106 VFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGE 185 (429)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CC
T ss_pred EEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCccccccc
Confidence 9999999999999988653 2 68999999999987644322111 24444444210 123
Q ss_pred c-ccCHHHHHHHHHHHHhcCCceeEEEEecC--CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 171 F-QITETAIEEAYQLAQKRHLKVKGVLVTNP--SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 171 ~-~~d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
| .+|++++++++++. ..++++ ++++| +||||. +.+.+++++|.++|++||+++|+||+|.++...+.. ..
T Consensus 186 ~~~~d~~~l~~~l~~~---~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~- 259 (429)
T 1s0a_A 186 WDERDMVGFARLMAAH---RHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FA- 259 (429)
T ss_dssp CCGGGGHHHHHHHHHH---TTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SG-
T ss_pred chHHHHHHHHHHHHhC---CCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HH-
Confidence 4 37899999988742 125554 55667 589996 567888999999999999999999999874332321 11
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh-------cccccCcHHHHHHHHHHhcC
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM-------SSFGLVSSQTQYLLSALLSD 318 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~-------~~~~~~s~~~q~~~~~~l~~ 318 (469)
.+... ...+++ |+||+++ +| +|+||++++++ +.+.+... ...+..+++++.++.++++.
T Consensus 260 ~~~~~--------~~~d~~---t~sK~l~-~G~~~iG~~~~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~ 326 (429)
T 1s0a_A 260 CEHAE--------IAPDIL---CLGKALT-GGTMTLSATLTTRE-VAETISNGEAGCFMHGPTFMGNPLACAAANASLAI 326 (429)
T ss_dssp GGGGT--------CCCSEE---EECGGGG-TSSSCCEEEEECHH-HHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHH
T ss_pred hhhcC--------CCCCEE---Eeccccc-CCCccceEEEeCHH-HHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 11111 112332 7999998 79 99999999654 44444432 12234678888887777653
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCC
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
..- ....++++++++++.+.|+++ ++....+. |.|+|++++... +..++...++ ++||.+.|+
T Consensus 327 ~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~~~~~~~~------~~~~l~~~l~-~~Gi~v~~~ 393 (429)
T 1s0a_A 327 LES-----GDWQQQVADIEVQLREQLAPARDAEMVADVRVL-GAIGVVETTHPV------NMAALQKFFV-EQGVWIRPF 393 (429)
T ss_dssp HHT-----CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEE-TTEEEEEESSCB------CHHHHHHHHH-HTTEECCCB
T ss_pred HHh-----CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEe-eEEEEEEECCcc------cHHHHHHHHH-HCCCEEecc
Confidence 211 123455566677788888765 33333444 468889886421 1235666666 669999873
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+++||+++. .+++++++++++|++++++.+
T Consensus 394 -------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 394 -------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp -------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred -------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 2589999764 499999999999999986544
No 141
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.96 E-value=1e-27 Score=246.47 Aligned_cols=325 Identities=15% Similarity=0.186 Sum_probs=218.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---EEEccCCCcChHHHHh
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE----PGEA---FLLPTPYYPGFDRDLK 153 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~---Vl~~~P~y~~~~~~~~ 153 (469)
.|.+..+..+|+++++++++ .++|++|+|+++|+..++.+++. +||. |+++.+.|..+...+.
T Consensus 71 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~ 140 (467)
T 1ax4_A 71 AYAGSRNYYDLKDKAKELFN----------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVE 140 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHcC----------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHh
Confidence 57766788999999999985 36899999999999999999988 9998 8988777777676777
Q ss_pred hhCCCEEEEeeccC----C----CCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCCCHHHHHHHHHHHHhcC
Q 043923 154 WRTGVEIVPIQCTS----L----NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 154 ~~~g~~~~~v~~~~----~----~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~~~ 224 (469)
.. |.+++.++.+. . .++.+|+++|++++++.. .+++++|++++|+||| |.+++.+++++|+++|++||
T Consensus 141 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~g 217 (467)
T 1ax4_A 141 LN-GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217 (467)
T ss_dssp HT-TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHT
T ss_pred cc-CCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcC
Confidence 66 99988876532 0 134689999999997521 1268999999999999 89999999999999999999
Q ss_pred eEEEEeccccc--cccC-----CCCccchhhhhhccccccCCcCCeEEEEccCccccCCC-cceEEEEEecCH-HHHHHH
Q 043923 225 IHLISDEIYSG--TVFS-----SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDD-MVVAAA 295 (469)
Q Consensus 225 ~~iI~Deay~~--~~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~-~~~~~~ 295 (469)
++||+||++.. .+|. +....++.++.++. .....+++.|+||++|++ | |+++++++ .+.+.+
T Consensus 218 i~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 218 IFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM------YKYADALTMSAKKDPLLNIG---GLVAIRDNEEIFTLA 288 (467)
T ss_dssp CCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHH------GGGCSEEEEETTSTTCCSSC---EEEEESSCHHHHHHH
T ss_pred CEEEEEchhhhhcchhccccccccCCCchhhhhhhh------ccccceEEEeccccCCCCcc---eEEEeCCHHHHHHHH
Confidence 99999998652 1100 01112333332100 001124568999999876 4 77777634 444433
Q ss_pred HHhc-------ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccc-
Q 043923 296 TKMS-------SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHL- 367 (469)
Q Consensus 296 ~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~- 367 (469)
.... .++..+.....++...+..... .+.++ ...++++++.+.|++.++++..+.+|+++|+++...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 363 (467)
T 1ax4_A 289 RQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYLH----YRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLV 363 (467)
T ss_dssp HHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHHH----HHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTC
T ss_pred HhhccccccccccCCccchHHHHHHHHHHHhhh-hhHHH----HHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhc
Confidence 2221 1222333333323323322110 11122 223456778888887788887788889999993221
Q ss_pred --cccCChhHHHHHHHHHHHhCCeEEeC-CCCC-CC---------CCCCeEEEEee-c-CCHHHHHHHHHHHHHHHHhhc
Q 043923 368 --LRSNTFEAEMELWKKIVYDVKLNISP-GSSC-HC---------TEPGWFRVCFA-N-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 368 --~~~~~~~~~~~l~~~ll~~~GI~v~p-g~~f-~~---------~~~~~iRi~~~-~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
..... .+..+++..|+.++||.+.| |..+ +. ...+++||+++ . .+++++++++++|++++++.+
T Consensus 364 ~~~~~~~-~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 364 PQIPGDQ-FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp TTSCGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccCC-CCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 00001 12446777775778999999 6532 11 11379999998 3 589999999999999988754
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 443 ~ 443 (467)
T 1ax4_A 443 T 443 (467)
T ss_dssp T
T ss_pred c
Confidence 4
No 142
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=2.4e-28 Score=244.98 Aligned_cols=298 Identities=15% Similarity=0.176 Sum_probs=213.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVE 159 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~ 159 (469)
.|.+..+..+|++++|++++ . .+.|++++| ++|+..++.++ +++||.|+++.|+|..+...+... |++
T Consensus 33 ~~~~~~~~~~l~~~la~~~~--------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 101 (388)
T 1b9h_A 33 WRMGGDEVNSFEREFAAHHG--------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISSSQAAQRL-GAV 101 (388)
T ss_dssp BTTTCSHHHHHHHHHHHHTT--------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred eecCCHHHHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 35556788999999999986 2 356777776 89999999999 899999999999999999888877 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-cc
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VF 238 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~ 238 (469)
++.++++++ +|.+|++++++++++ ++++|+ |+||||.+.+ +++|.++|++||++||+|++|+.. .+
T Consensus 102 ~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~ 168 (388)
T 1b9h_A 102 TVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARW 168 (388)
T ss_dssp EEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEE
T ss_pred EEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCcc
Confidence 999998753 578999999998854 677655 9999999987 556888899999999999999842 22
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH--HHHHHHhccc--------------c
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV--VAAATKMSSF--------------G 302 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~--~~~~~~~~~~--------------~ 302 (469)
.+. .+. ..+ ++.+.||||..+++|.|+||+++++..+ .+.+...... +
T Consensus 169 ~~~---~~~------------~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (388)
T 1b9h_A 169 QGK---RVG------------ELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAG 232 (388)
T ss_dssp TTE---EGG------------GSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCC
T ss_pred CCe---ecc------------ccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeeccc
Confidence 211 111 112 5778899977666777999999976544 3333322211 1
Q ss_pred c---CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec------CCceEEEEEecccccccCC
Q 043923 303 L---VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK------SNAGLFCWVDMRHLLRSNT 372 (469)
Q Consensus 303 ~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~------~~~g~~~~v~~~~~~~~~~ 372 (469)
. .+.+...++...+ +++++.+++++++++++.+.|+++ |+++.. +.+++++|+.++...
T Consensus 233 ~~~~~~~~~~a~~~~~~-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 301 (388)
T 1b9h_A 233 SNMRLNEFSASVLRAQL-------ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT---- 301 (388)
T ss_dssp CBCBCBHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----
T ss_pred ccCCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----
Confidence 1 2333322222222 224556777778889999999987 787765 345789999997421
Q ss_pred hhHHHHHHHHHHHhCCeEEeCCCCCCC-----------C----------------CCCeEEEEeec-C-CHHHHHHHHHH
Q 043923 373 FEAEMELWKKIVYDVKLNISPGSSCHC-----------T----------------EPGWFRVCFAN-M-SEDTLKLSMQR 423 (469)
Q Consensus 373 ~~~~~~l~~~ll~~~GI~v~pg~~f~~-----------~----------------~~~~iRi~~~~-~-~~e~i~~~l~~ 423 (469)
..+..++.+.|. ++||.++++..... . ..+.+||++.. + ++++++++++.
T Consensus 302 ~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~ 380 (388)
T 1b9h_A 302 EERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEI 380 (388)
T ss_dssp HHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHH
T ss_pred cccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHH
Confidence 012335666665 56999987643110 0 01359999976 6 89999999999
Q ss_pred HHHHHHh
Q 043923 424 LKAFVDS 430 (469)
Q Consensus 424 L~~~l~~ 430 (469)
|++++++
T Consensus 381 l~~~~~~ 387 (388)
T 1b9h_A 381 IADAVAR 387 (388)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998764
No 143
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.96 E-value=6.1e-28 Score=245.71 Aligned_cols=349 Identities=15% Similarity=0.126 Sum_probs=215.8
Q ss_pred CCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..+||++.+.+ ++ +++.+.+++.+.. .....+. ..+..+++.++++.+.+.++ +++++
T Consensus 43 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~-~~~~~~~~~~l~~~la~~~~----~~~~~ 104 (433)
T 1zod_A 43 RAILDFTSGQMSAVLGHCHPEIVSVIGEYA-------------GKLDHLF-SEMLSRPVVDLATRLANITP----PGLDR 104 (433)
T ss_dssp CEEEETTHHHHTCTTCBTCHHHHHHHHHHH-------------HHCCCCC-TTCCCHHHHHHHHHHHHHSC----TTCCE
T ss_pred CEEEEcccchhccccCCCCHHHHHHHHHHH-------------HhCcccc-cccCCHHHHHHHHHHHHhCC----CCcCE
Confidence 45789877654 33 2455666665531 1110011 11223444555555554443 46789
Q ss_pred EEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhh-------------CCCEEEEeeccCCCCcc------
Q 043923 114 IVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWR-------------TGVEIVPIQCTSLNGFQ------ 172 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~-------------~g~~~~~v~~~~~~~~~------ 172 (469)
|++|+|+++|+..+++.+. ..++.|++.+|+|+++...+... .|+..+++|......|.
T Consensus 105 v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (433)
T 1zod_A 105 ALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYD 184 (433)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEEC
T ss_pred EEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhh
Confidence 9999999999999998653 24579999999998765432211 14455544422111222
Q ss_pred --cCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 173 --ITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 173 --~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
+|++++++++++. ...++++ ++++| +||||. +.+.+++++|.++|++||++||+||+|.++.+.+.. .. .+
T Consensus 185 ~~~d~~~le~~l~~~--~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~-~~ 259 (433)
T 1zod_A 185 YLAELDYAFDLIDRQ--SSGNLAA-FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FA-CQ 259 (433)
T ss_dssp HHHHHHHHHHHHHHH--CCSCEEE-EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-ST-HH
T ss_pred HHHHHHHHHHHHHhc--CCCCeEE-EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hH-Hh
Confidence 3688898888642 1125554 55677 588996 678999999999999999999999999975333321 11 12
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--c--ccccCcHHHHHHHHHHhcCchhhHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--S--SFGLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~--~~~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
... .... +.|+||+|| +|+|+||+++++ .+.+.+... . ..+..+++++.++.++++...-
T Consensus 260 ~~~--------~~~d---i~s~sK~~~-~G~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--- 323 (433)
T 1zod_A 260 RDG--------VTPD---ILTLSKTLG-AGLPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--- 323 (433)
T ss_dssp HHT--------CCCS---EEEECHHHH-TTSSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---
T ss_pred hcC--------CCCC---EEEeccccc-CCCCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---
Confidence 211 1122 238999999 599999999965 454444432 1 2233678888877777653110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc----C-CceecCCceEEEEEecccccccC--ChhHHHHHHHHHHHhCCeEEeCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKA----G-ISCLKSNAGLFCWVDMRHLLRSN--TFEAEMELWKKIVYDVKLNISPGSSC 397 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~----g-~~v~~~~~g~~~~v~~~~~~~~~--~~~~~~~l~~~ll~~~GI~v~pg~~f 397 (469)
....++++++++++.+.|+++ + +...++. |.|+|++++...... ......+++..++ ++||.+.||..|
T Consensus 324 --~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~ 399 (433)
T 1zod_A 324 --DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLP 399 (433)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCT
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCC
Confidence 112344444555555555543 3 2233344 467888886421000 0122345677766 679999999876
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 398 HCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 398 ~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+ .++++||+++. .+++++++++++|++++++.
T Consensus 400 ~--~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 400 G--MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp T--SCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 5 35799998764 59999999999999998653
No 144
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.3e-27 Score=240.29 Aligned_cols=346 Identities=12% Similarity=0.096 Sum_probs=211.2
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHH-HHHHhHcCCCCCCCCCcEEEe
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALV-EFMSEIRGNKVTFDTSKIVLT 117 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia-~~l~~~~~~~~~~~~~~i~~t 117 (469)
+.|+|..++|+. ++.+.+++.+..... .. .+ ......|+.... .++.++++ +.+.+.++ .+. ..+++
T Consensus 33 ~~i~l~~~~~~~-~~~v~~a~~~~~~~~-~~-~~---~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~----~~~-~~v~~ 100 (425)
T 3ecd_A 33 SQVELIASENIV-SRAVLDAQGSVLTNK-YA-EG---YPGKRYYGGCEF-ADEVEALAIERVKRLFN----AGH-ANVQP 100 (425)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGSS-CT-TC----------------CCHHHHHHHHHHHHHHT----CSE-EECCC
T ss_pred cceeeecccCCC-CHHHHHHHhhhhhcc-cc-cC---CCcchhcCCChH-HHHHHHHHHHHHHHHhC----CCC-ceeec
Confidence 469999999887 445555555431000 00 00 001111222211 12333333 44444433 222 23458
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCCcC---hHHHHhhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 118 AGATSANETLMFCLAEPGEAFLLPTPYYPG---FDRDLKWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 118 ~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~---~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+|+++|+..++.+++++||.|+++.|+|.. +....... |. +++.++.+. +++.+|++++++++++. ++
T Consensus 101 ~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~ 173 (425)
T 3ecd_A 101 HSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALS-GKWFNALQYGVSR-DTMLIDYDQVEALAQQH-----KP 173 (425)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH-----CC
T ss_pred CchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhc-ccceeeeecCCCc-ccCccCHHHHHHHHhhc-----CC
Confidence 888999999999999999999999999987 22222122 44 555666553 45789999999999742 78
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-ccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
++|++++|+||+. . ++++|.++|++||++||+||+|... .+.+.. .+.. + ...+++.|+|
T Consensus 174 ~~v~~~~~~~~~~--~---~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~-~~~~---~----------~~di~~~s~s 234 (425)
T 3ecd_A 174 SLIIAGFSAYPRK--L---DFARFRAIADSVGAKLMVDMAHIAGVIAAGRH-ANPV---E----------HAHVVTSTTH 234 (425)
T ss_dssp SEEEEECSCCCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS-CCGG---G----------TCSEEEEESS
T ss_pred cEEEEccccCCCc--C---CHHHHHHHHHHcCCEEEEECcChHhhhhcccc-cCch---h----------cCcEEEecCC
Confidence 9999999999743 3 3678999999999999999996432 233322 2211 1 1237789999
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcccc---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG 348 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g 348 (469)
|++ +|.|+||++++++.+.+.+......+ ..+.....++..++.. ...++++..++++.++++++.+.|.+.|
T Consensus 235 K~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (425)
T 3ecd_A 235 KTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE--ALTDDFKTYIDRVLANAQALGDVLKAGG 310 (425)
T ss_dssp GGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 988 67789999998666665554433221 2233333333333321 1123456778888889999999999999
Q ss_pred CceecC-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCCCCeEEEEeec-----CCHHHHH
Q 043923 349 ISCLKS-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRVCFAN-----MSEDTLK 418 (469)
Q Consensus 349 ~~v~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~~~~iRi~~~~-----~~~e~i~ 418 (469)
+++.++ .+++++|+.++.... +. +.+.+.++++||.+. ||..+....++++|+++.. .++++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~ 384 (425)
T 3ecd_A 311 VDLVTGGTDNHLLLVDLRPKGL-----KG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFR 384 (425)
T ss_dssp CEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHH
T ss_pred CeeccCCCCceEEEEEeCCCCC-----CH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHH
Confidence 888754 466888998864211 11 234555677899999 5543333345689999543 2489999
Q ss_pred HHHHHHHHHHHhhc
Q 043923 419 LSMQRLKAFVDSIT 432 (469)
Q Consensus 419 ~~l~~L~~~l~~~~ 432 (469)
+++++|++++++.+
T Consensus 385 ~~~~~l~~~l~~~~ 398 (425)
T 3ecd_A 385 EVGRLILEVFEALR 398 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 99999999998873
No 145
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=3.5e-27 Score=242.09 Aligned_cols=356 Identities=8% Similarity=0.012 Sum_probs=225.8
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCccccccc-ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFREL-ALFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||++.+ .+++. ++.+.+++.+.. ... ..|....+..+++.++++++.+..+ ..
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~ 111 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQA-------------KNLAYYHAYVGHGTEASITLAKMIIDRAP----KG 111 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHH-------------HHHSCCCCCTTCCCHHHHHHHHHHHHHSC----TT
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHH-------------HhccccccccccCCHHHHHHHHHHHhhCC----CC
Confidence 34468999887 55553 466666665421 111 1233334446777777777776543 46
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccC---
Q 043923 111 TSKIVLTAGATSANETLMFCLAE--------PGEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTS--- 167 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~--- 167 (469)
.++|++|+|+++|+..+++++.. +++.|++.+|+|+++...+....|. .+..++...
T Consensus 112 ~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 191 (460)
T 3gju_A 112 MSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFR 191 (460)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGG
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCcccc
Confidence 78999999999999999998863 5699999999998876544332121 233344221
Q ss_pred CCCcccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 168 LNGFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 168 ~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
.+++..+ +++|++++++. ...++++|++..++|++|. +++.+.+++|.++|++||+++|+||+|.++..
T Consensus 192 ~~~~g~~~~~~~~~~~~~le~~i~~~--~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 269 (460)
T 3gju_A 192 RTDRSMSEEQFSQHCADKLEEMILAE--GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGR 269 (460)
T ss_dssp CSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred CCccccChhHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 0111223 57788877642 1125666555544677776 77888999999999999999999999997533
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH---------hcccccCcHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK---------MSSFGLVSSQT 308 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~---------~~~~~~~s~~~ 308 (469)
.+.. .. .+... ....+ .+|||+++ .| +|+||++++++ +.+.+.. ....+..++++
T Consensus 270 ~g~~-~~-~~~~~--------~~pdi---~t~sK~l~-gG~~~lg~v~~~~~-i~~~~~~~~~~~~~~~~~~t~~~~~~~ 334 (460)
T 3gju_A 270 LGTM-FG-SDHYG--------IKPDL---ITIAKGLT-SAYAPLSGVIVADR-VWQVLVQGSDKLGSLGHGWTYSAHPIC 334 (460)
T ss_dssp TSSS-CH-HHHHT--------CCCSE---EEECGGGT-TTSSCCEEEEEEHH-HHHHHHHHHHHHCSCSCCCTTTTCHHH
T ss_pred cccc-ch-HhhcC--------CCCCe---eeeehhhc-CCCCCeEEEEECHH-HHHHHhcccccccccccCCCCCCCHHH
Confidence 3322 11 12211 11222 37899997 67 89999999554 4444431 11233478888
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCCceEEEEEecccccccC-----ChhHHHHHHHH
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSN-----TFEAEMELWKK 382 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~-----~~~~~~~l~~~ 382 (469)
+.++.++|+.... ++.+++.++..+..++.|.+.+.+++ +....+.+ .|+++.+....... ......+++..
T Consensus 335 ~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (460)
T 3gju_A 335 VAAGVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEFVADKDDRVFFDASQKIGPQVATA 412 (460)
T ss_dssp HHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEEccCccccccccchHHHHHHHHHH
Confidence 8888888864221 22345555555555666666666654 33344444 67778775421110 00113345566
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++ ++||.++|+. ..+++||++.. .+++++++++++|++++++..+
T Consensus 413 l~-~~Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 413 LA-ASGVIGRAMP-----QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp HH-HTTEECEECS-----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HH-HCCeEEecCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 55 5699999875 25789999764 4999999999999999987654
No 146
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=7.1e-28 Score=246.72 Aligned_cols=359 Identities=12% Similarity=0.057 Sum_probs=219.1
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .+++. ++.+.+++.+. +.....|....+..+++.++++++.+.++. -..+
T Consensus 63 G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~-------------~~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~~~ 126 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVGASHPAVAAAIADQ-------------ATHFTHTCFMVTPYEQYVQVAELLNALTPG---DHDK 126 (453)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHH-------------HHHCSCCTTTTSCCHHHHHHHHHHHHHSSC---SSCE
T ss_pred CCEEEEcCCCcccCcCCCCCHHHHHHHHHH-------------HHhccccccCcCCCHHHHHHHHHHHHhCCC---CCCc
Confidence 3468999987 66663 46666666553 122233444445567777777777766431 1257
Q ss_pred cEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCC-------------EEEEeecc--CCCCcccC-
Q 043923 113 KIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGV-------------EIVPIQCT--SLNGFQIT- 174 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~-------------~~~~v~~~--~~~~~~~d- 174 (469)
+|++|+|+++|+..+++.+.. .++.|++.+|+|+++...+....+. .+..+|.+ ..+.+..+
T Consensus 127 ~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 206 (453)
T 4ffc_A 127 RTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTG 206 (453)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCH
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccch
Confidence 999999999999999977642 4589999999998876554332111 34444433 11112223
Q ss_pred HHHHHHHHHHHHhc-CCceeEEEEecCCCCCC--CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 175 ETAIEEAYQLAQKR-HLKVKGVLVTNPSNPLG--TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 175 ~~~l~~~i~~~~~~-~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
.+.++..++..... .++..++|+++|+||+| .+.+.+.+++|.++|++||+++|+||+|.++...+.. ... +..
T Consensus 207 ~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~-~~~- 283 (453)
T 4ffc_A 207 EEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FAS-EHE- 283 (453)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STH-HHH-
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chh-hhc-
Confidence 23333222221110 12445678888988776 4558888999999999999999999999885433321 111 111
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcCchhhHHHHHHH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSDKKFTQNYISEN 329 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 329 (469)
+....+.||||++| .|+|+||++++ +.+.+.+.... ..+..+++++.++.++|+.... .+.+++.
T Consensus 284 ----------~~~pdi~t~sK~~~-~G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~ 350 (453)
T 4ffc_A 284 ----------GIVPDIVTMAKGIA-GGMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARA 350 (453)
T ss_dssp ----------TCCCSEEEECGGGG-TTSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHH
T ss_pred ----------CCCcchHhhhhhhc-CCcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHH
Confidence 11122347999998 59999999995 44444333222 2344788888888888763211 1123333
Q ss_pred HHHHHHHHHHHHHHHHhcC-CceecCCceEEEEEecccccc-cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEE
Q 043923 330 KKRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLR-SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRV 407 (469)
Q Consensus 330 ~~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~-~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi 407 (469)
++.....++.|.+.+.+++ +....+ .|+|+|+.+..... ........+++..++ ++||.+.|+..| .+++|+
T Consensus 351 ~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi 424 (453)
T 4ffc_A 351 RAIEASVTSRLSALAEEVDIIGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF----GNVIRL 424 (453)
T ss_dssp HHHHHHHHHHHHHHHHHCSSEEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT----SCEEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC----CCEEEE
Confidence 3333333344444444443 233333 35788888743100 011123345666665 569999998654 358999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 408 CFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 408 ~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+++. .+++++++++++|++++++..+
T Consensus 425 ~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 425 LPPLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9876 4999999999999999987643
No 147
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=4.8e-28 Score=245.90 Aligned_cols=327 Identities=13% Similarity=0.158 Sum_probs=222.6
Q ss_pred eeeccccccCh-HHHHHHHhcCCCccccccCCcccccccccCCC-CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCC
Q 043923 42 QMGLAENQLSF-DLLESWLDRNPDAAGFKRDGQSIFRELALFQD-YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAG 119 (469)
Q Consensus 42 ~L~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G 119 (469)
+|+.++|++++ +.+.+++.+. +. ...|++ ..+..+|++++|++++ .++|++|+|
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~-------------~~-~~~y~~~~~~~~~l~~~la~~~~----------~~~v~~~~g 75 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRA-------------LD-SQWLSNGGPLVREFEERVAGLAG----------VRHAVATCN 75 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHH-------------HH-HTCCSSSCHHHHHHHHHHHHHHT----------SSEEEEESC
T ss_pred cccccCCCCCChHHHHHHHHHH-------------Hh-cCCcccCCHHHHHHHHHHHHHhC----------CCeEEEeCC
Confidence 78999998864 5566665542 11 125876 6788999999999995 358999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec
Q 043923 120 ATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN 199 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~ 199 (469)
+++|+..++.++. +||.|+++.|+|..+...+... |++++.+++++ .+|.+|++++++++++ ++++|++++
T Consensus 76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~ 146 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWI-GLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGVH 146 (424)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEEC
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHc-CCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEEC
Confidence 9999999999985 7899999999999999888877 99999999875 4678999999988754 788888764
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc
Q 043923 200 PSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG 278 (469)
Q Consensus 200 P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 278 (469)
|||...+ +++|+++|+++|++||+||+|+ ++.+++. ++. .... +++.||||..+++|
T Consensus 147 ---~tG~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~------------~~~d-i~~~S~sk~K~l~~ 204 (424)
T 2po3_A 147 ---LWGRPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAG------------SLGD-AEVFSFHATKAVNA 204 (424)
T ss_dssp ---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETT------------SSSS-EEEEECCTTSSSCC
T ss_pred ---CCCCcCC---HHHHHHHHHHcCCEEEEECccccCCeECCe---ecc------------cccC-EEEEeCCCCCCccC
Confidence 8998755 6668899999999999999998 4444332 111 1122 78899996666677
Q ss_pred ceEEEEEecCHHHHHHHHHhccccc-----------CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043923 279 FRVGAIYSNDDMVVAAATKMSSFGL-----------VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA 347 (469)
Q Consensus 279 lRiG~li~~~~~~~~~~~~~~~~~~-----------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 347 (469)
.|+||++++++.+.+.+......+. ...+.+.++...+.. .+.++...++..+.++++.+.|+++
T Consensus 205 ~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (424)
T 2po3_A 205 FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADL 280 (424)
T ss_dssp SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8999999975555554443322110 001122222222221 2234556666667777888888876
Q ss_pred -CCceec-CCce----EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC--------------CCCe---
Q 043923 348 -GISCLK-SNAG----LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT--------------EPGW--- 404 (469)
Q Consensus 348 -g~~v~~-~~~g----~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~--------------~~~~--- 404 (469)
++++.+ +.++ +++++.++..... .+..++.+. +.++||.+.+. |... .++.
T Consensus 281 ~g~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~-L~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~~r~ 354 (424)
T 2po3_A 281 PGVLVADHDRHGLNNHQYVIVEIDEATTG---IHRDLVMEV-LKAEGVHTRAY--FSPGCHELEPYRGQPHAPLPHTERL 354 (424)
T ss_dssp TTEEECCGGGGSCCCCCCEEEEECHHHHS---SCHHHHHHH-HHHTTEECBCT--TCSCGGGSTTTTTSCCCCCHHHHHH
T ss_pred CCccccCCCCCCccccEEEEEEECCccch---hhHHHHHHH-HHHCCCceecc--cCCccccchhhhhcCCCCChhHHHH
Confidence 777765 3332 2344666531000 012245554 45779999872 2210 0122
Q ss_pred ----EEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 405 ----FRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 405 ----iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|+++.. .+++++++++++|++++++..+
T Consensus 355 ~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~ 388 (424)
T 2po3_A 355 AARVLSLPTGTAIGDDDIRRVADLLRLCATRGRE 388 (424)
T ss_dssp HTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 6666433 5999999999999998876544
No 148
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=1.3e-27 Score=239.94 Aligned_cols=300 Identities=11% Similarity=0.105 Sum_probs=209.8
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
|.+..+..+|++++|++++ .+++++++|+++|+..++.++ +++||.|+++.|+|..+...+... |+++
T Consensus 35 ~~~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~ 103 (393)
T 1mdo_A 35 ITTGPKNQELEAAFCRLTG----------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLL-GANP 103 (393)
T ss_dssp CSSSHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEE
T ss_pred cCCChHHHHHHHHHHHHhC----------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHHC-CCEE
Confidence 3345678999999999985 347999999999999999999 899999999999999998888877 9999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-ccC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VFS 239 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~~ 239 (469)
+.+++++ +++.+|++++++++++ ++++|+++ ||||.+.+ +++|.++|+++|+++|+||+|+.. .+.
T Consensus 104 ~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~ 170 (393)
T 1mdo_A 104 VMVDVDR-DTLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYK 170 (393)
T ss_dssp EEECBCT-TTCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEET
T ss_pred EEEeccC-CcCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeEC
Confidence 9999875 3577999999988864 78887775 48999877 566888999999999999999852 232
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc-----------------
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG----------------- 302 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~----------------- 302 (469)
+. . + . . .++++.|+||+.+++|.|+||++++++.+.+.+......+
T Consensus 171 ~~---~---~-~--------~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T 1mdo_A 171 GR---H---I-G--------A--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQA 233 (393)
T ss_dssp TE---E---T-T--------S--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CC
T ss_pred Ce---e---c-C--------C--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccc
Confidence 21 1 1 0 1 5688899993333455589999997565555444332211
Q ss_pred ---------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-C-----CceEEEEEecccc
Q 043923 303 ---------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK-S-----NAGLFCWVDMRHL 367 (469)
Q Consensus 303 ---------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~-~-----~~g~~~~v~~~~~ 367 (469)
..+.+...++...+.. +++..++.++.++++.+.|+++++++.. + .+++++|+.++..
T Consensus 234 ~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (393)
T 1mdo_A 234 EVLAPGYKYNLPDLNAAIALAQLQK-------LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEA 306 (393)
T ss_dssp EESSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHH
T ss_pred cccccCccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccc
Confidence 1233333333333322 3344445556778888889887766542 2 3456789988731
Q ss_pred cccCChhHHHHHHHHHHHhCCeEEeCCCCCC--------------CC-----CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 368 LRSNTFEAEMELWKKIVYDVKLNISPGSSCH--------------CT-----EPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 368 ~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~--------------~~-----~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
... .+..++.+.+. ++||.+++|..+. .. ..+++|+++.. .+++++++++++|+++
T Consensus 307 ~~~---~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 307 RCG---ITRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp HHS---SCHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ccc---cCHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 000 11234566655 5799999886441 00 13479999975 5999999999999998
Q ss_pred HHhhcc
Q 043923 428 VDSITT 433 (469)
Q Consensus 428 l~~~~~ 433 (469)
++....
T Consensus 383 ~~~~~~ 388 (393)
T 1mdo_A 383 AGQGSH 388 (393)
T ss_dssp HC----
T ss_pred HhcCCc
Confidence 776554
No 149
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=1.2e-27 Score=248.93 Aligned_cols=308 Identities=13% Similarity=0.133 Sum_probs=225.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------CEEEEccCCCcChHHH
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI--VLTAGATSANETLMFCLAEPG--------EAFLLPTPYYPGFDRD 151 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i--~~t~G~~~al~~~~~~l~~~g--------d~Vl~~~P~y~~~~~~ 151 (469)
|....+..++++++++++.+.+| .+.+++++ ++|+|+++++..++.++..+| |.|+++.|+|..+...
T Consensus 131 ~~~~p~~~~le~~l~~~la~~~g--~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~ 208 (514)
T 3mad_A 131 PDLWPSTAKFEAEVVAMTAHMLG--GDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA 208 (514)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTT--GGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHcC--CCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH
Confidence 33444667888888888888766 22334788 999999999999999998776 8999999999999999
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
+... |++++.+|++. ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+||
T Consensus 209 ~~~~-G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 209 AQYF-GIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp HHHH-TCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred HHHc-CCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEec
Confidence 9888 99999999874 678999999999865 7899999999999999988 5668889999999999999
Q ss_pred cccccccC-----CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc------
Q 043923 232 IYSGTVFS-----SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS------ 300 (469)
Q Consensus 232 ay~~~~~~-----~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~------ 300 (469)
+|+++.+. +.....+... ..+.++++.|++|+++ +|.++|+++++++.+.........
T Consensus 277 a~~~~~~~~~~~~g~~~~~~~~~----------~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
T 3mad_A 277 CLGGFILPWAERLGYPVPPFDFR----------LEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGL 345 (514)
T ss_dssp TTTTTTHHHHHHTTCCCCCCSTT----------STTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCS
T ss_pred ccccccchhHHhcCCCCCccccc----------CCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCc
Confidence 99976441 1101111111 2355788899999874 788999999977665432111110
Q ss_pred ------cccCcH---HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEeccccccc
Q 043923 301 ------FGLVSS---QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMRHLLRS 370 (469)
Q Consensus 301 ------~~~~s~---~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~~~~~~ 370 (469)
.+..+. +++.++...+. ...+++..+++.++++++.+.|+++ ++++..+..+ ++|+..+..
T Consensus 346 ~~~~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~--- 416 (514)
T 3mad_A 346 YFSPTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL--- 416 (514)
T ss_dssp EEESSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS---
T ss_pred ccCCccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC---
Confidence 111122 23333333332 2345677788888899999999987 8888776664 667765421
Q ss_pred CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhcc
Q 043923 371 NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 371 ~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+..++.+.|. ++||.+ +|..| ++++|++++. .+++++++++++|++++++.++
T Consensus 417 ----~~~~l~~~L~-~~Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 417 ----NIYQVMEEMA-GRGWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp ----CHHHHHHHHH-TTTCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHH-hcCCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1235666665 569988 55443 4679999974 2679999999999999987765
No 150
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=8.8e-28 Score=247.42 Aligned_cols=302 Identities=14% Similarity=0.143 Sum_probs=219.9
Q ss_pred CCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCC-----EEEEccCCCcChHHHHhhh
Q 043923 85 YHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL----AEPGE-----AFLLPTPYYPGFDRDLKWR 155 (469)
Q Consensus 85 ~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd-----~Vl~~~P~y~~~~~~~~~~ 155 (469)
.+|..++++++++++.+.+| ++. .+++++|+++++..++.++ .++|| +|+++.|+|+.+...+...
T Consensus 102 ~~g~~~l~~~l~~~la~~~g----~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTG----MDA-ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHC----CCc-eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 45677889999999888776 222 4678899999998766554 35787 9999999999999888877
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|++++.+|++. ++.+|+++|++++++ ++++|++++| ||||.+. +++++|+++|++||+++|+||+|..
T Consensus 177 -G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~ 244 (474)
T 1wyu_B 177 -GYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLN 244 (474)
T ss_dssp -TCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred -CCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhh
Confidence 99999999873 577999999998864 7899999998 6899883 3578899999999999999999986
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC-c---ceEEEEEecCHHHHHHHH-H-------------
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP-G---FRVGAIYSNDDMVVAAAT-K------------- 297 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G---lRiG~li~~~~~~~~~~~-~------------- 297 (469)
..++ ..+...+ +.++++.|+||+|+.| | +|+||++++++.+ +.+. .
T Consensus 245 ~~~g---~~~~~~~------------g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~-~~l~~~~~~~~g~~~~~~~ 308 (474)
T 1wyu_B 245 AIMG---WARPGDM------------GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLA-PYLPVPLVERGEEGFYLDF 308 (474)
T ss_dssp GTTT---TCCHHHH------------TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGG-GGCCSCEEEECSSCEEEEC
T ss_pred hhcc---CCCcccC------------CCcEEEEeCccccccCCCCCCCCeEEEEEcHHHH-HhCCCCeeeccCCeeEecc
Confidence 5432 1222222 4567888999999766 4 6999999976543 2221 0
Q ss_pred --------hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEE-EEEeccccc
Q 043923 298 --------MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLF-CWVDMRHLL 368 (469)
Q Consensus 298 --------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~-~~v~~~~~~ 368 (469)
...+ +.+.+.+.++..++.... .+.+++..+++.++++++.+.|++.|+++..+...+. +|++++..
T Consensus 309 ~~~~~~~~~~~~-~~~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~- 384 (474)
T 1wyu_B 309 DRPKSIGRVRSF-YGNFLALVRAWAYIRTLG--LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEG- 384 (474)
T ss_dssp CCTTCCCCSSST-TSCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTT-
T ss_pred cCcccCcccccC-cCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCC-
Confidence 0111 245566666666665322 3456777888889999999999988887633322221 55666211
Q ss_pred ccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 369 RSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 369 ~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+..+++++|++ +||.+ |+..|.....+++||+++. .+++++++++++|++++++
T Consensus 385 -----~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 385 -----FRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp -----CCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred -----CCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 123457777764 59985 6666643346789999985 3899999999999999876
No 151
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=6.5e-28 Score=243.89 Aligned_cols=325 Identities=11% Similarity=0.044 Sum_probs=219.1
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccc-cCCC--CCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELA-LFQD--YHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~--~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.+.+.|+.+.+..+++.+.+++.+..... . + ..... .|+. .....++++.++++++ +++++|
T Consensus 27 ~~~~yld~~~~~~~~~~v~~a~~~~l~~~-~---~---~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v 91 (416)
T 1qz9_A 27 EGVIYLDGNSLGARPVAALARAQAVIAEE-W---G---NGLIRSWNSAGWRDLSERLGNRLATLIG--------ARDGEV 91 (416)
T ss_dssp TTCEECCTTTSCCCBTTHHHHHHHHHHTC-C---C---CCGGGHHHHTSGGGHHHHHHHHHHTTTT--------CCTTSE
T ss_pred CCeEeecCCCcCCCcHHHHHHHHHHHHHH-H---h---ccCccccchhhHHHHHHHHHHHHHHHcC--------CCcccE
Confidence 46788888877765666666665521000 0 0 00000 1110 1334677777777664 567899
Q ss_pred EEeCChHHHHHHHHHHhc------CCCCEE-EEccCCCcChHHHHh---hhC--CCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLA------EPGEAF-LLPTPYYPGFDRDLK---WRT--GVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~------~~gd~V-l~~~P~y~~~~~~~~---~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
++|+|+++++..++.+++ ++||.| ++..++|+.+...+. ... |++++.+|. ++++++++
T Consensus 92 ~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i 162 (416)
T 1qz9_A 92 VVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAI 162 (416)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHC
T ss_pred EEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHh
Confidence 999999999998888876 899875 454557775544322 122 888888874 56777776
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWN 262 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 262 (469)
++ ++++|++++|+||||.+++ +++|.++|++||+++|+||+|+ ++... .++..+ +
T Consensus 163 ~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~---~g~~~-~~~~~~------------~ 217 (416)
T 1qz9_A 163 DQ------DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHS---AGAVP-VDLHQA------------G 217 (416)
T ss_dssp ST------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTT---TTTSC-CCHHHH------------T
T ss_pred CC------CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccc---ccCcC-CChhhc------------C
Confidence 53 7899999999999999998 5668899999999999999997 33221 222222 3
Q ss_pred eEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHh-------------------------cccccCcHHHHHHHHHHh
Q 043923 263 RVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKM-------------------------SSFGLVSSQTQYLLSALL 316 (469)
Q Consensus 263 ~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~-------------------------~~~~~~s~~~q~~~~~~l 316 (469)
..+++.|++|+++ +|.++ |+++++++.+.. +... ...++.+...+.++.+++
T Consensus 218 ~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~-l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 295 (416)
T 1qz9_A 218 ADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDL-VPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGL 295 (416)
T ss_dssp CSEEEECSSSTTC-CCTTCCCEEEECTTTTTT-SCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHH
T ss_pred CCEEEecCcccCC-CCCCCeEEEEECHHHHhc-cCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHH
Confidence 4578889999985 77888 999997654321 1111 012235556665555555
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCC----ceEEEEEecccccccCChhHHHHHHHHHHHhCC
Q 043923 317 SDKKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSN----AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVK 388 (469)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~----~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~G 388 (469)
+... ..++++.+++++++++++.+.|+++ |+++..+. .+.++|+.++. ..++.+.|. ++|
T Consensus 296 ~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~l~-~~g 363 (416)
T 1qz9_A 296 DVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------GYAVIQALI-DRG 363 (416)
T ss_dssp HHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------HHHHHHHHH-TTT
T ss_pred HHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------HHHHHHHHH-hCC
Confidence 4211 1125667788888889999999886 88877663 35678998863 224666655 669
Q ss_pred eEEeCCCCCCCCCCCeEEEEee--cCCHHHHHHHHHHHHHHHHhh
Q 043923 389 LNISPGSSCHCTEPGWFRVCFA--NMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 389 I~v~pg~~f~~~~~~~iRi~~~--~~~~e~i~~~l~~L~~~l~~~ 431 (469)
|.+... .++++||+++ ..+++++++++++|++++++.
T Consensus 364 i~~~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 364 VIGDYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp EECEEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cEeccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 987532 3578999997 359999999999999998764
No 152
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.96 E-value=6.3e-27 Score=239.64 Aligned_cols=295 Identities=14% Similarity=0.143 Sum_probs=202.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhhh
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWR 155 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~ 155 (469)
..|+ ..|.+ +++++++++.+.++ .+++++++|+++|+..++. ++++||.|+++.|.|..+... +...
T Consensus 125 ~~Y~-~~g~~-~~~~l~~~la~~~g------~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~ 195 (464)
T 1ibj_A 125 YDYT-RSGNP-TRDALESLLAKLDK------ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_dssp CSBT-TTCCH-HHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGG
T ss_pred cccc-CCCCH-HHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHc
Confidence 4566 34544 78888888877765 3477778888999998875 779999999999999988754 3445
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+||+|..
T Consensus 196 -G~~v~~v~~~-------d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 196 -GVVVKRVNTT-------KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp -TCEEEEECTT-------SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTC
T ss_pred -CCEEEEeCCC-------CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 9999999863 78889888764 8999999999999999997 66799999999999999999974
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCC-CcceEEEEEecCHHHHHHHHHhcc--cccCcHHHHHHH
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAATKMSS--FGLVSSQTQYLL 312 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~~~~~~--~~~~s~~~q~~~ 312 (469)
..+ .... ..+.++++.|+||+++. +|+|+||++++++.+.+.+..... .+.++++.++++
T Consensus 259 g~~-----~~~~------------~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~ 321 (464)
T 1ibj_A 259 PVL-----SRPL------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_dssp TTT-----CCGG------------GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHH
T ss_pred ccc-----CChh------------hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 211 1111 12578899999999964 489999999976566555544432 234678888888
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHHHH----------HHHHhc-CCceecCC---ceEEEEEecccccccCChhHHHH
Q 043923 313 SALLSDKKFTQNYISENKKRLKQRHRKLV----------SGLEKA-GISCLKSN---AGLFCWVDMRHLLRSNTFEAEME 378 (469)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~l~~~~~~l~----------~~L~~~-g~~v~~~~---~g~~~~v~~~~~~~~~~~~~~~~ 378 (469)
.+.+..... .++...+......+++. +.|+++ ++++.+++ .|.++++.+++. .....
T Consensus 322 ~~al~~~~~---r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~------~~~~~ 392 (464)
T 1ibj_A 322 LRGIKTMAL---RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV------ALSKH 392 (464)
T ss_dssp HHHHTTHHH---HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCH------HHHHH
T ss_pred HhchhhHHH---HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCH------HHHHH
Confidence 888775321 12222211221112222 122222 33444443 245788888521 11223
Q ss_pred HHHHHHHhCCeEEeCCC------------CCCC---------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 379 LWKKIVYDVKLNISPGS------------SCHC---------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~------------~f~~---------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
+++.+ +..||.+++|. .++. ..++++|++++. +++++++++|++++++
T Consensus 393 ~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 393 LVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp HHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred HHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 44443 45799998885 2221 125789999984 8999999999999875
No 153
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=3.6e-27 Score=238.48 Aligned_cols=346 Identities=12% Similarity=0.079 Sum_probs=213.8
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
+.+.+..++|.. ++.+.+++.+...... . .+ ......|+.......+++...+.+.+.++ +++++|++++
T Consensus 31 ~~~~~~~~~n~~-~~~v~~a~~~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~~v~~~s 100 (420)
T 3gbx_A 31 EHIELIASENYT-SPRVMQAQGSQLTNKY-A-EG---YPGKRYYGGCEYVDVVEQLAIDRAKELFG----ADYANVQPHS 100 (420)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGGCC-C------------------CHHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cceeeeccCCCC-CHHHHHHHHHHHhccc-c-cC---CCCccccCchHHHHHHHHHHHHHHHHHhC----CCCceeEecC
Confidence 457787777774 5556666655310000 0 00 01111233333334455444455554444 4666776777
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChH---HHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFD---RDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
| ++++..++.+++++||+|+++.|+|..+. ...... .+...++++.+ .++.+|++++++++++. ++++
T Consensus 101 G-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~ 172 (420)
T 3gbx_A 101 G-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-----KPKM 172 (420)
T ss_dssp H-HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-----CCSE
T ss_pred c-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-----CCeE
Confidence 6 78999999999999999999999998743 111122 14556666665 45678999999999763 5899
Q ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcccc
Q 043923 195 VLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL 274 (469)
Q Consensus 195 vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~ 274 (469)
|++++|+||+ ..+ +++|.++|++||+++|+||+|....+........ .....+++.|+||++
T Consensus 173 v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~-------------~~~~di~~~s~sK~~ 234 (420)
T 3gbx_A 173 IIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP-------------VPHAHVVTTTTHKTL 234 (420)
T ss_dssp EEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS-------------TTTSSEEEEESSGGG
T ss_pred EEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcc-------------cccCCEEEeecccCC
Confidence 9999999975 445 7779999999999999999986432322211111 112448889999998
Q ss_pred CCCcceEEEEEecC--HHHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 043923 275 GLPGFRVGAIYSND--DMVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGI 349 (469)
Q Consensus 275 g~~GlRiG~li~~~--~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~ 349 (469)
+ |.+.||+++++ ..+.+.+...... +..+...+.++...+... ..+++++.++++.++++++.+.|.+.|+
T Consensus 235 ~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 310 (420)
T 3gbx_A 235 A--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNAKAMVEVFLNRGY 310 (420)
T ss_dssp C--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred C--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4 45559999976 3454444432221 123333333333333211 1234577788888899999999998898
Q ss_pred ceecC-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-------CCCCCCCCCCeEEEEeec-----CCHHH
Q 043923 350 SCLKS-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP-------GSSCHCTEPGWFRVCFAN-----MSEDT 416 (469)
Q Consensus 350 ~v~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p-------g~~f~~~~~~~iRi~~~~-----~~~e~ 416 (469)
++.++ ..++++|+.++.... +. +.+.++++++||.+.| +..|+ +..+|+++.. .++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~---~~~iRi~~~~~~~~~~~~~~ 381 (420)
T 3gbx_A 311 KVVSGGTENHLFLLDLVDKNL-----TG-KEADAALGRANITVNKNSVPNDPKSPFV---TSGIRIGSPAVTRRGFKEAE 381 (420)
T ss_dssp EEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEEECCTTCSSCTTT---CSEEEEECHHHHHTTCCHHH
T ss_pred eeccCCCCCeEEEEEcCCCCC-----CH-HHHHHHHHHCCcEeccccCCCCccccCC---CcceEEecchhcccCCCHHH
Confidence 87653 456788888864211 11 3345556788999998 33332 3459999864 25799
Q ss_pred HHHHHHHHHHHHHhhcc
Q 043923 417 LKLSMQRLKAFVDSITT 433 (469)
Q Consensus 417 i~~~l~~L~~~l~~~~~ 433 (469)
+++++++|++++++..+
T Consensus 382 i~~~~~~l~~~l~~~~~ 398 (420)
T 3gbx_A 382 VKELAGWMCDVLDNIND 398 (420)
T ss_dssp HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999977543
No 154
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.95 E-value=1.3e-26 Score=237.79 Aligned_cols=353 Identities=10% Similarity=0.025 Sum_probs=221.4
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccc-cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELA-LFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
...+||++.+ .+++. ++.+.+++.+.. .... .|+...+..++++++++++.+.++ .+.
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~ 111 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQM-------------EELPFYNTFFKTTHPAVVELSSLLAEVTP----AGF 111 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCSCCCTTSSSCCHHHHHHHHHHHHHSC----TTC
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHH-------------HhccccccccccCCHHHHHHHHHHHHhCC----CCC
Confidence 3468999887 66663 466666665531 1111 233333456777888888877654 467
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCCcChHHHHhhhC--------------CCEEEEeecc-CC
Q 043923 112 SKIVLTAGATSANETLMFCLAE--------PGEAFLLPTPYYPGFDRDLKWRT--------------GVEIVPIQCT-SL 168 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~~--------------g~~~~~v~~~-~~ 168 (469)
++|++++|+++|+..+++++.. +++.|++.+|+|+++...+.... +...+++|.. ..
T Consensus 112 ~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (459)
T 4a6r_A 112 DRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKH 191 (459)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccC
Confidence 8999999999999999999875 57999999999998765544331 2222333320 00
Q ss_pred CCcccC--------HHHHHHHHHHHHhcCCceeEEEEecCC-CCCCC-CCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 169 NGFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 169 ~~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+++ .| +++|++.+++.. ..+++ +++++|+ |++|. +++.+.+++|.++|++||+++|+||+|.++..
T Consensus 192 ~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 267 (459)
T 4a6r_A 192 GKD-MTPDEFGVVAARWLEEKILEIG--ADKVA-AFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGR 267 (459)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred Ccc-cCHHHHHHHHHHHHHHHHHHcC--CCCEE-EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 112 34 677887776421 11444 4566664 45555 55999999999999999999999999998543
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHH---H--hcccccCcHHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAAT---K--MSSFGLVSSQTQYLLS 313 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~---~--~~~~~~~s~~~q~~~~ 313 (469)
.+..+ . ..... ....++ +|||+++..|+|+||+++++ .+.+.+. . ....+..+++++.++.
T Consensus 268 ~G~~~-~-~~~~~--------~~pdi~---t~sK~l~gg~~~lg~v~~~~-~i~~~~~~~~~~~~~~t~~~~~~~~aaa~ 333 (459)
T 4a6r_A 268 TGEWF-G-HQHFG--------FQPDLF---TAAKGLSSGYLPIGAVFVGK-RVAEGLIAGGDFNHGFTYSGHPVCAAVAH 333 (459)
T ss_dssp TSSSS-H-HHHHT--------CCCSEE---EECGGGGTTSSCCEEEEECH-HHHHHHHHHCTTHHHHHHCSCHHHHHHHH
T ss_pred ccccc-h-HhhcC--------CCCCee---ehhhhhcCCCCCccceeeCH-HHHHHhhcCCCcccCCCCCCCHHHHHHHH
Confidence 43321 1 12211 222333 68999984449999999954 4544443 1 1223347888988888
Q ss_pred HHhcCchhhHHHHHHHH-HHHHHHHHHHHHHHHhcC-CceecCCceEEEEEecccccccC-----ChhHHHHHHHHHHHh
Q 043923 314 ALLSDKKFTQNYISENK-KRLKQRHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSN-----TFEAEMELWKKIVYD 386 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~-~~l~~~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~-----~~~~~~~l~~~ll~~ 386 (469)
++|+.... ++.+++.+ +.....++.|.+.|.+++ +....+.+ .|+++.+....... ......+++..++ +
T Consensus 334 aal~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 410 (459)
T 4a6r_A 334 ANVAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-R 410 (459)
T ss_dssp HHHHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-H
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCccccccccchHHHHHHHHHHHH-H
Confidence 88863221 12233333 333344444545555443 33444444 67777765321110 0112345666666 5
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
+||.++|+. +++||+++. .+++++++++++|++++++..++
T Consensus 411 ~Gv~v~~~g-------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (459)
T 4a6r_A 411 NNLIMRACG-------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQT 452 (459)
T ss_dssp TTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 699999862 689999765 49999999999999999877653
No 155
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=1.9e-27 Score=242.16 Aligned_cols=347 Identities=13% Similarity=0.065 Sum_probs=209.3
Q ss_pred CCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++. ++.+.+++.+.... .....|+ .....+|++++++++. .++
T Consensus 54 g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~-----------~~~~~~~-~~~~~~l~~~la~~~~---------~~~ 112 (434)
T 3l44_A 54 GNKYIDYLAAYGPIITGHAHPHITKAITTAAEN-----------GVLYGTP-TALEVKFAKMLKEAMP---------ALD 112 (434)
T ss_dssp CCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHH-----------CSCCSSC-CHHHHHHHHHHHHHCT---------TCS
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHh-----------CcCCCCC-CHHHHHHHHHHHHhCC---------CCC
Confidence 45689998775 5553 56666666653110 0112243 3345667777776652 478
Q ss_pred cEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcc------------cCHHHH
Q 043923 113 KIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQ------------ITETAI 178 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~d~~~l 178 (469)
+|++++|+++|+..++..+.. +++.|++.+|+|+++...+....|.....+......++. .|++++
T Consensus 113 ~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 192 (434)
T 3l44_A 113 KVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETL 192 (434)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHH
T ss_pred EEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHH
Confidence 999999999999999988754 678999999999887654433323322211111111110 178999
Q ss_pred HHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccc
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCE 256 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~ 256 (469)
++++++.. .++++ ++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+.. ...+...
T Consensus 193 e~~l~~~~---~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~--~~~~~~~----- 260 (434)
T 3l44_A 193 KEALDKWG---HEVAA-ILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG--GAQDLLG----- 260 (434)
T ss_dssp HHHHHHHG---GGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS--CHHHHHT-----
T ss_pred HHHHHhCC---CCEEE-EEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc--HHHHHcC-----
Confidence 99887531 24554 55556 45566655 8899999999999999999999999986 33321 1122211
Q ss_pred cCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-----hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHH
Q 043923 257 NTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKK 331 (469)
Q Consensus 257 ~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 331 (469)
.... +.|+||++| +|+|+||++++ +.+.+.+.. ....+..+++++.++.++|+.... .+.+++.++
T Consensus 261 ---~~~d---i~t~sK~~~-~G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~ 331 (434)
T 3l44_A 261 ---VTPD---LTALGKVIG-GGLPIGAYGGK-KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDE 331 (434)
T ss_dssp ---CCCS---EEEEEGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHH
T ss_pred ---CCCC---eeehhhhhc-CCcCeeeEEEc-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHH
Confidence 1122 348999998 89999999885 444444433 112234678888887777653211 112233333
Q ss_pred HHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc-------CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCe
Q 043923 332 RLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS-------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGW 404 (469)
Q Consensus 332 ~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~-------~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~ 404 (469)
.....++.|.+.+.++++....+..|.|+++.+...... .......+++..++ ++||.++|+. .++
T Consensus 332 ~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~~~ 404 (434)
T 3l44_A 332 LGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK------YEA 404 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST------TCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC------CCc
Confidence 223333334444444454333333446777776421100 01122235566665 5699999874 246
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 405 FRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 405 iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+|+++. .+++++++++++|++++++.++
T Consensus 405 ~rl~~~-~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 405 WFLTTE-HTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp EECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecc-cCHHHHHHHHHHHHHHHHHHHh
Confidence 888765 5999999999999999987654
No 156
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.95 E-value=3.3e-28 Score=241.15 Aligned_cols=283 Identities=15% Similarity=0.156 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCCh-HHHHHHHHHHhcCC---CCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGA-TSANETLMFCLAEP---GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~-~~al~~~~~~l~~~---gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
.++++.++++++ +. ++++|++|+|+ ++|+..++.+++.+ ||.|+++.++|..+ ..+... | +++.++
T Consensus 51 ~~l~~~la~~~g------~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~-g-~~~~v~ 120 (360)
T 1w23_A 51 EQAQNLLRELLQ------IP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLL-G-ETHIAA 120 (360)
T ss_dssp HHHHHHHHHHHT------CC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTT-S-EEEEEE
T ss_pred HHHHHHHHHHhC------CC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHh-C-CeEEee
Confidence 455555555554 21 35799999999 99999999998765 56777777776543 334555 9 999999
Q ss_pred ccCCCCcccCHHHHHH-HHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 165 CTSLNGFQITETAIEE-AYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~-~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+++++++ +|++++++ ++++ ++++|++++|+||||.+++ ++. ++||++||+||+|+.+ ...
T Consensus 121 ~~~~~~~-~d~~~l~~~~i~~------~~k~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~---~~~- 181 (360)
T 1w23_A 121 STKANSY-QSIPDFSEFQLNE------NDAYLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDIL---SRP- 181 (360)
T ss_dssp ECGGGTS-CSCCCGGGCCCCT------TEEEEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTT---SSC-
T ss_pred cccccCc-CCccchHhhccCC------CCCEEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcC---CCC-
Confidence 8753333 67788877 6643 7999999999999999987 322 2799999999999852 111
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--------------ccccCcHHHH
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--------------SFGLVSSQTQ 309 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--------------~~~~~s~~~q 309 (469)
.+ + . .. .++++|+||.||++| +||++++++.+ +.+.... .+++.+...+
T Consensus 182 ~~---~-~--------~~--di~~~s~sK~~~~~G--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (360)
T 1w23_A 182 LK---V-N--------QF--GMIYAGAQKNLGPSG--VTVVIVKKDLL-NTKVEQVPTMLQYATHIKSDSLYNTPPTFSI 244 (360)
T ss_dssp CC---G-G--------GC--SEEEEETTTTTSCTT--CEEEEEEHHHH-CSCCTTCCGGGCHHHHHHTTTCSSCCCHHHH
T ss_pred cC---c-c--------cC--CEEEEEcccccCCCC--cEEEEEcHHHH-hhcccCCcchhhhhhhhhccCCCCCCCHHHH
Confidence 12 1 1 11 378899999999666 89999965543 2222111 1133455666
Q ss_pred HHHHHHhcCchhhHH-HHHHHHHHHHHHHHHHHHHHHhcC-C-cee--cC-CceEEEEEecccccccCChhHHHHHHHHH
Q 043923 310 YLLSALLSDKKFTQN-YISENKKRLKQRHRKLVSGLEKAG-I-SCL--KS-NAGLFCWVDMRHLLRSNTFEAEMELWKKI 383 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~g-~-~v~--~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~l 383 (469)
.++.+++.... .. ++++.+++++++++++.+.|++++ + .+. +. .+++++|+.++.. .+..++.+.+
T Consensus 245 ~~~~~al~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l 316 (360)
T 1w23_A 245 YMLRNVLDWIK--DLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAKA 316 (360)
T ss_dssp HHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHHH
T ss_pred HHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHHH
Confidence 66655554211 11 467788889999999999999875 5 543 22 3456899998742 1233556664
Q ss_pred HHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 384 VYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 384 l~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.++||.+.||..+ ++++||+++. .+++++++++++|++++++
T Consensus 317 -~~~gi~~~~~~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 317 -KEQGFVGLNGHRS----VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp -HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -HHCCeeeecCCCC----CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 5679999998754 5689999985 3899999999999998753
No 157
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.4e-27 Score=245.71 Aligned_cols=312 Identities=11% Similarity=0.083 Sum_probs=226.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CC---CEEEEccCCCcChHHHH
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-----PG---EAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----~g---d~Vl~~~P~y~~~~~~~ 152 (469)
.|....|..++++++++++.+.+| .+.+++++++++|+++++..++.++++ +| |.|+++.|+|..+...+
T Consensus 98 ~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~ 175 (497)
T 3mc6_A 98 HPDVFPAVRKMESEVVSMVLRMFN--APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAA 175 (497)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT--CCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHHHHhC--CCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHH
Confidence 344555678999999999988877 223478999999999999999999864 45 89999999999999988
Q ss_pred hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q 043923 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI 232 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Dea 232 (469)
... |++++.+|++. +++.+|+++|++++++ ++++|++++|+||||.+.+.+ +|.++|++||+++|+|++
T Consensus 176 ~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~l~---~i~~la~~~g~~livD~a 244 (497)
T 3mc6_A 176 YYF-GMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADDIE---GLGKIAQKYKLPLHVDSC 244 (497)
T ss_dssp HHS-CCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCSCT---TTTTHHHHTTCCEEEETT
T ss_pred HHc-CCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCCHH---HHHHHHHHhCCEEEEECc
Confidence 887 99999999874 3678999999998864 789999999999999998855 588889999999999999
Q ss_pred ccccccC--C---CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc-----
Q 043923 233 YSGTVFS--S---PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG----- 302 (469)
Q Consensus 233 y~~~~~~--~---~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~----- 302 (469)
|+++... . ....+.... ...+..+++.|++|.++ +|.++|+++++++.+..........+
T Consensus 245 ~~~~~~~f~~~~~~~~~~~~~~---------~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (497)
T 3mc6_A 245 LGSFIVSFMEKAGYKNLPLLDF---------RVPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLY 314 (497)
T ss_dssp TTHHHHGGGTTTTCCSCCCCST---------TSTTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCB
T ss_pred chhhhhhhhhhhcccCCccccc---------cCCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCc
Confidence 9865321 1 000100111 02345678889999874 88899999997766543211111110
Q ss_pred -c------Cc---HHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--CCceecCCceEEEEEeccccccc
Q 043923 303 -L------VS---SQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--GISCLKSNAGLFCWVDMRHLLRS 370 (469)
Q Consensus 303 -~------~s---~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g~~v~~~~~g~~~~v~~~~~~~~ 370 (469)
. .+ ..++.++...+.. ..+++..+++.++.+++.+.|++. |+++..+..+.++++..+.
T Consensus 315 ~~~~~~g~~~~~~~~a~~aal~~l~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~---- 385 (497)
T 3mc6_A 315 GSPTLAGSRPGAIVVGCWATMVNMGE-----NGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKT---- 385 (497)
T ss_dssp CCSSSCSSCBHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTT----
T ss_pred CCcCcccCCcchhHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCC----
Confidence 0 01 3335555555433 234666777788889999999994 8888744444455555442
Q ss_pred CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 371 NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 371 ~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+..++.+.|. ++||.+.++.. +..+|++++..+++++++++++|++++++..+
T Consensus 386 ---~~~~~l~~~L~-~~Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 386 ---LNIHELSDRLS-KKGWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp ---TTHHHHHHHHH-TTTCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred ---CCHHHHHHHHH-hCCEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 12335666665 66999886643 34689999866999999999999999988765
No 158
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=6.3e-27 Score=241.47 Aligned_cols=344 Identities=15% Similarity=0.131 Sum_probs=229.2
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC----cE
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS----KI 114 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~----~i 114 (469)
+.|+|..++|+.+ +.+.+++.+..... -.++ ......|....+.+++++++.+++.+.+| ++++ +|
T Consensus 45 ~~i~L~a~e~~~~-~~V~eA~~~~l~~~--~~~g---~p~~~~y~~~~~~~~le~~~~~~~a~~~g----~~~~~~~~~V 114 (483)
T 1rv3_A 45 VGLELIASENFAS-RAVLEALGSCLNNK--YSLG---YPGQRYYGGTEHIDELETLCQKRALQAYG----LDPQCWGVNV 114 (483)
T ss_dssp SSEECCTTCCCCC-HHHHHHHTSGGGTC--CCCE---ETTEESSSCCHHHHHHHHHHHHHHHHHTT----CCTTTEEEEC
T ss_pred cCeEEEcCCCCCC-HHHHHHHHHHHhcc--Cccc---CCCccccCcchhHHHHHHHHHHHHHHHhC----CCcccCceEE
Confidence 5799998888754 44555555421100 0000 01112244444557888888888887776 4443 48
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH--------HhhhCC--CEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD--------LKWRTG--VEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~--------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++++|+ +++..++.++++|||+|++++|.|.++... +... | .+++++++++ .++.+|++++++++++
T Consensus 115 ~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~-G~~~~~v~~~~~~-~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 115 QPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISAT-SIFFESMAYKVNP-DTGYIDYDRLEENARL 191 (483)
T ss_dssp CCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHH-HHHSEEEEECBCT-TTCSBCHHHHHHHHHH
T ss_pred EECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccc-cceEEEEECcccc-CCCcCCHHHHHHHHhh
Confidence 888888 889888899999999999999998877532 2233 4 5566665553 3578999999999973
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-ccccCCCCccchhhhhhccccccCCcCCe
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
. ++++|++ +++||+ .+++ +++|.++|+++|+++|+|++|. ++.+.+.. .+.. + ..
T Consensus 192 ~-----~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~-~~p~---~----------~~ 247 (483)
T 1rv3_A 192 F-----HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVV-PSPF---E----------HC 247 (483)
T ss_dssp H-----CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS-CCGG---G----------TC
T ss_pred c-----CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCC-CCCC---C----------CC
Confidence 2 8899888 899988 7777 5668889999999999999986 33232221 1111 1 23
Q ss_pred EEEEccCccccCCCcceEEEEEecCH--------------HHHHHHHHhc-c--cccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDD--------------MVVAAATKMS-S--FGLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~--------------~~~~~~~~~~-~--~~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
.+++.|+||++ +|+|.||+++++. .+...+.... . .++.+.....++..++.... ...+
T Consensus 248 div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~--~~~~ 323 (483)
T 1rv3_A 248 HVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM--TPEF 323 (483)
T ss_dssp SEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT--SHHH
T ss_pred cEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh--ChhH
Confidence 47789999987 6788899999764 1223222211 1 12233333444444443211 1235
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceecCC-ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEKAGISCLKSN-AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTE 401 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~g~~v~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~ 401 (469)
++.++++.++++++.+.|.+.|+++..+. .++++|++++... .+..+ +.++|++.||.+. ||..+ ...
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g-----~~~~~-~~~~L~~~gI~v~~~~~pg~~~-~~~ 396 (483)
T 1rv3_A 324 KEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKG-----TDGGR-AEKVLEACSIACNKNTCPGDKS-ALR 396 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGT-----CCHHH-HHHHHHHTTEECEEECCSSCSC-TTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCC-----CCHHH-HHHHHHhCCcEEecCCCCCCCc-CCC
Confidence 67788888899999999999899887653 3467888886321 01123 3455678899999 88742 224
Q ss_pred CCeEEEEeecC-C----HHHHHHHHHHHHHHHHh
Q 043923 402 PGWFRVCFANM-S----EDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 402 ~~~iRi~~~~~-~----~e~i~~~l~~L~~~l~~ 430 (469)
++++||+++.. + ++++++++++|+++++.
T Consensus 397 ~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 397 PSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 67899999753 4 89999999999999876
No 159
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.95 E-value=1.2e-26 Score=237.36 Aligned_cols=354 Identities=10% Similarity=0.021 Sum_probs=215.2
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .+++. ++.+.+++.+.. .....|....+..+++.++++++.+.++. ...+
T Consensus 60 g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~~~ 123 (451)
T 3oks_A 60 GNRLIDLGSGIAVTTVGNSAPKVVEAVRSQV-------------GDFTHTCFMVTPYEGYVAVCEQLNRLTPV---RGDK 123 (451)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHH-------------TTCSCCTTTTSCCHHHHHHHHHHHHHSSC---CSSE
T ss_pred CCEEEEcCCCccccccCCCCHHHHHHHHHHH-------------HhcccccCCccCCHHHHHHHHHHHHhCCc---CCCC
Confidence 3468999987 56663 466666665531 22233444345567777888887766431 1357
Q ss_pred cEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCC-------------CEEEEeeccCC--C---Cc-
Q 043923 113 KIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCTSL--N---GF- 171 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~~~--~---~~- 171 (469)
+|++|+|+++|+..+++.+.. .++.|++..|+|+++...+....+ ..+..+|.+.. + +.
T Consensus 124 ~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 203 (451)
T 3oks_A 124 RSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKE 203 (451)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTT
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccc
Confidence 899999999999999987653 458999999999887654433211 13444554310 0 00
Q ss_pred --c---cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCcc
Q 043923 172 --Q---ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 172 --~---~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~ 244 (469)
. .+++.+++.+++.. +++..++|+++|.|++| ...+.+.+++|.++|++||+++|+||+|.++...+.. .
T Consensus 204 ~~~~~~~~~~~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~ 280 (451)
T 3oks_A 204 LATDGELAAKRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-F 280 (451)
T ss_dssp TTTCHHHHHHHHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-S
T ss_pred cchhhHHHHHHHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-h
Confidence 0 12344444444321 12344567777877665 3457777999999999999999999999975443331 1
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhh
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFT 322 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~ 322 (469)
. .+... ....++ ||||++| +|+|+||++++ +.+.+.+... ...+..+++++.++.++|+....
T Consensus 281 ~-~~~~~--------~~pdi~---t~sK~l~-~G~~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~- 345 (451)
T 3oks_A 281 A-CEHEG--------IDPDLI---VTAKGIA-GGLPLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAALATIETIES- 345 (451)
T ss_dssp G-GGGGT--------CCCSEE---EECGGGG-TTSSCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-
T ss_pred h-hhhcC--------CCCCee---eehhhhh-CCcceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-
Confidence 1 11111 112222 8999998 69999999995 4444433322 22234788888888888763211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-ceecCCceEEEEEecccccc-cCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 323 QNYISENKKRLKQRHRKLVSGLEKAGI-SCLKSNAGLFCWVDMRHLLR-SNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 323 ~~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~~~~~g~~~~v~~~~~~~-~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
.+.+++.++.....++.|.+.+.+++. ....+. |.|+|+.+..... ........+++..++ ++||.+.|+..|
T Consensus 346 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--- 420 (451)
T 3oks_A 346 EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTY--- 420 (451)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT---
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCC---
Confidence 112333333333333444444444432 233333 5688887743100 011123345666655 669999998655
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 401 EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 401 ~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+++|++++. .+++++++++++|++++++
T Consensus 421 -~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 -GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp -SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 3589999876 4999999999999999864
No 160
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=1.8e-27 Score=236.30 Aligned_cols=287 Identities=14% Similarity=0.106 Sum_probs=200.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCC-c-EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTS-K-IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~-~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v 163 (469)
..++++++.+.+.+.+| ++++ + +++|+|+++++..++.+++++||.|++..+.+... ...++.. | +++.+
T Consensus 47 ~~~~~~~~~~~la~~~g----~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g-~~~~v 120 (362)
T 2c0r_A 47 YEAVHNEAQARLLALLG----NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLI-G-DTHVA 120 (362)
T ss_dssp HHHHHHHHHHHHHHHTT----CCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHH-S-CEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHh-C-CeEEE
Confidence 35566777777766655 4453 5 56889999999999999999999999887764432 3455566 9 99999
Q ss_pred eccCC--CCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 164 QCTSL--NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 164 ~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
+.+.+ .++.+|.++++ ++ +++++|++++|+||||.+++ +++++ +|+++|+|++|+.. ..
T Consensus 121 ~~~~~~~~~~~~~~~~~~--i~------~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~---~~ 181 (362)
T 2c0r_A 121 ASSEASNYMTLPKLQEIQ--LQ------DNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDIL---SR 181 (362)
T ss_dssp EECGGGTTCSCCCGGGCC--CC------TTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTT---SS
T ss_pred ecccccccccCCCHHHcc--cC------CCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhcc---CC
Confidence 87632 23334655543 33 38999999999999999754 23334 79999999999842 22
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH--------------hcccccCcHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK--------------MSSFGLVSSQ 307 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~--------------~~~~~~~s~~ 307 (469)
+ .+ + . . ..+++.|+||++|++| +||++++++.+.. +.. ....++++.+
T Consensus 182 ~-~~---~-~--------~--~d~~~~s~~K~~g~~G--~G~l~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~t~~~~ 243 (362)
T 2c0r_A 182 P-FD---L-N--------Q--FGLVYAGAQKNLGPSG--VTVVIVREDLVAE-SPKHLPTMLRYDTYVKNNSLYNTPPSF 243 (362)
T ss_dssp C-CC---G-G--------G--CSEEEEETTTTTCCSS--CEEEEEEGGGSSS-CCTTSCGGGCHHHHHHTTTCSSCCCHH
T ss_pred c-cc---h-h--------H--CcEEEEeccccccCcC--cEEEEEcHHHHhh-ccccCchHHhHHHHhhccCcCCCchHH
Confidence 1 12 1 1 1 2477789999999888 9999996554321 111 0123456777
Q ss_pred HHHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhcC-C-ceecC---CceEEEEEecccccccCChhHHHHHH
Q 043923 308 TQYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKAG-I-SCLKS---NAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~-~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
.+.++.++|+.. .+ .++..+++++++++++.+.|++++ + ++..+ .++.++++.++.. .+..+++
T Consensus 244 ~~~a~~~al~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 314 (362)
T 2c0r_A 244 GIYMVNEVLKWI---EERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE------ELEKEFV 314 (362)
T ss_dssp HHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH------HHHHHHH
T ss_pred HHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc------chHHHHH
Confidence 888887777532 22 467888899999999999999987 6 66421 2345678888642 1233566
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.| .++||.+.||..| .+++|+|++. .+++++++++++|+++++++
T Consensus 315 ~~L-~~~gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 315 KAS-EQEGFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp HHH-HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHCCCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 654 5679999988765 3579999985 38999999999999988753
No 161
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=5e-26 Score=228.12 Aligned_cols=287 Identities=17% Similarity=0.158 Sum_probs=199.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRT 156 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~ 156 (469)
.|+. .+..+|++++|++++ . .+.|++++| ++|+..++.++.++||.|+++.|+|.+.... +...
T Consensus 48 ~~~~-~~~~~l~~~la~~~~--------~-~~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~- 115 (386)
T 1cs1_A 48 RRGN-PTRDVVQRALAELEG--------G-AGAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG- 115 (386)
T ss_dssp TTCC-HHHHHHHHHHHHHHT--------C-SEEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTT-
T ss_pred CCCC-ccHHHHHHHHHHHhC--------C-CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhc-
Confidence 4443 467899999999986 2 266777666 8999999999999999999999999875443 2445
Q ss_pred CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 157 GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 157 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
|++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+||+|..+
T Consensus 116 g~~~~~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~ 179 (386)
T 1cs1_A 116 CYRVLFVDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSP 179 (386)
T ss_dssp SCEEEEECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCT
T ss_pred CCEEEEeCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9999988853 78999998875 7899999999999999997 566889999999999999999865
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhccc--ccCcHHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSSF--GLVSSQTQYLLS 313 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~~--~~~s~~~q~~~~ 313 (469)
.+.. . .. .+.++++.|+||++|.+|.|+ ||++++++.+.+.+...... ...+++.++++.
T Consensus 180 ~~~~----~-~~------------~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 242 (386)
T 1cs1_A 180 ALQN----P-LA------------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLL 242 (386)
T ss_dssp TTCC----G-GG------------GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred ccCC----c-cc------------cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 3321 1 11 156788999999999899997 99999764554444433222 235667766665
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc-eecC----------------CceEEEEEecccccccCChhH
Q 043923 314 ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-IS-CLKS----------------NAGLFCWVDMRHLLRSNTFEA 375 (469)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~-v~~~----------------~~g~~~~v~~~~~~~~~~~~~ 375 (469)
..++. +....+.+.++.+.+.+.|+++. +. +..+ ..|.++.+.+++.
T Consensus 243 ~~l~~-------~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 307 (386)
T 1cs1_A 243 RGLRT-------LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-------- 307 (386)
T ss_dssp HHHTT-------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--------
T ss_pred hcccH-------HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--------
Confidence 55542 33445556667777777777652 21 1111 1245666666531
Q ss_pred HHHHHHHHHHhCCeEEeCCCCCC-------------------------CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 376 EMELWKKIVYDVKLNISPGSSCH-------------------------CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 376 ~~~l~~~ll~~~GI~v~pg~~f~-------------------------~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
. +.+...+.+.||.+++++ |+ ...++++|++++. +++++.+++|.+++++
T Consensus 308 ~-~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 308 E-QTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRA 382 (386)
T ss_dssp H-HHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHH
Confidence 1 234445667899887432 11 0125799999985 4556666666666665
Q ss_pred hc
Q 043923 431 IT 432 (469)
Q Consensus 431 ~~ 432 (469)
..
T Consensus 383 ~~ 384 (386)
T 1cs1_A 383 AN 384 (386)
T ss_dssp HT
T ss_pred hh
Confidence 43
No 162
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=6.6e-27 Score=239.23 Aligned_cols=350 Identities=11% Similarity=0.061 Sum_probs=210.0
Q ss_pred CCCeeeeecc--cccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .+.+ .++.+.+++.+.. .....|....+..+++.++++++.+.++ ...+
T Consensus 43 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~ 105 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHGHRKKELDDAIKKQL-------------GKIAHSTLLGMTNVPATQLAETLIDISP----KKLT 105 (448)
T ss_dssp SCEEEETTHHHHTCSSCBSCHHHHHHHHHHH-------------TTCSCCCCSSSEEHHHHHHHHHHHHHSC----TTEE
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 3468999876 4444 3466666666531 1122233334556778888888877654 3568
Q ss_pred cEEEeCChHHHHHHHHHHhcC----C----CCEEEEccCCCcChHHHHhhhCCC------------EEEEeeccCCCCcc
Q 043923 113 KIVLTAGATSANETLMFCLAE----P----GEAFLLPTPYYPGFDRDLKWRTGV------------EIVPIQCTSLNGFQ 172 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~----~----gd~Vl~~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~~ 172 (469)
+|++++|+++|+..++.++.. + +|.|++.+|+|+++........|. .+..+|.+ ..|.
T Consensus 106 ~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 183 (448)
T 3dod_A 106 RVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYR 183 (448)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTT
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--cccc
Confidence 999999999999999998865 4 499999999998775443322121 12333332 2222
Q ss_pred c-----------CHHHHHHHHHHHHhcCCceeEEEEecCC-CCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 173 I-----------TETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLG-TTMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 173 ~-----------d~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG-~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
. |+++|+++++.. ..++++|++..++ |++| .+.+.+.+++|.++|++||+++|+||+|.++...
T Consensus 184 ~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~ 260 (448)
T 3dod_A 184 SESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRT 260 (448)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred CCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Confidence 2 378888888732 1256665555555 7888 4568888999999999999999999999985443
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-------h--cccccCcHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-------M--SSFGLVSSQTQ 309 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~-------~--~~~~~~s~~~q 309 (469)
+..+ . ..... .... +.+|||+++ +| +|+||+++++ .+.+.+.. . ...+..+++++
T Consensus 261 g~~~-a-~~~~~--------~~~d---i~t~sK~l~-~G~~~ig~v~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 325 (448)
T 3dod_A 261 GKMF-A-CEHEN--------VQPD---LMAAGKGIT-GGYLPIAVTFATE-DIYKAFYDDYENLKTFFHGHSYTGNQLGC 325 (448)
T ss_dssp SSSS-G-GGGGT--------CCCS---EEEECGGGG-TTSSCCEEEEEEH-HHHHTTCSCGGGCCCCCCCCTTTTCHHHH
T ss_pred cchh-h-hhhcC--------CCCC---EEEeccccc-CCcCceEEEEECH-HHHHHhhhccccCCcccccCCCCcCHHHH
Confidence 3321 1 11111 1122 337899998 69 5999999954 45444433 1 12234678888
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCC-h----hHHHHHHHHHH
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNT-F----EAEMELWKKIV 384 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~-~----~~~~~l~~~ll 384 (469)
.++.++|+.... .+.++..++..+..++.|.+ +.+++........|.|+|+.++....... . ....+++..++
T Consensus 326 aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 403 (448)
T 3dod_A 326 AVALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR 403 (448)
T ss_dssp HHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH
Confidence 888888763221 11233333333334444444 44443222222235788888865321100 0 01235666666
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++||.+.|+ .+++|++++. .+++++++++++|++++++..+
T Consensus 404 -~~Gv~~~~~-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 404 -ELGMLTRPL-------GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp -HTTEECCEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -HCCcEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 559999986 2689997764 4999999999999999987643
No 163
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=2.8e-26 Score=230.92 Aligned_cols=299 Identities=13% Similarity=0.135 Sum_probs=203.5
Q ss_pred cHHHHH----HHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCC--C
Q 043923 88 LPAFKK----ALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTG--V 158 (469)
Q Consensus 88 ~~~Lr~----aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g--~ 158 (469)
..++++ .++++++ .+++.|++++| ++++..++.+++++||.|+++.|+|..+... +... | .
T Consensus 67 ~~~l~~~~r~~la~~~g--------~~~~~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~ 136 (405)
T 2vi8_A 67 VDIVEELARERAKQLFG--------AEHANVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFS-GVQY 136 (405)
T ss_dssp HHHHHHHHHHHHHHHHT--------CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHH-HHHS
T ss_pred HHHHHHHHHHHHHHHhC--------CCceEEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhc-ccee
Confidence 445654 5555553 34445556666 9999999999999999999999999887531 1233 4 4
Q ss_pred EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccccc
Q 043923 159 EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVF 238 (469)
Q Consensus 159 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~ 238 (469)
+++.+++++ .++.+|++++++++++. ++++|++ +|+|+ |...+ +++|.++|++||+++|+||+|+....
T Consensus 137 ~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~ 205 (405)
T 2vi8_A 137 NFVAYGVDP-ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLV 205 (405)
T ss_dssp EEEEECBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHH
T ss_pred EEEeccccc-ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEcccccccc
Confidence 788887753 35778999999998753 5777665 56554 44444 67799999999999999999984322
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccC-CCcceEEEEEecCHHHHHHHHHhc-cc--ccCcHHHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLG-LPGFRVGAIYSNDDMVVAAATKMS-SF--GLVSSQTQYLLSA 314 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~GlRiG~li~~~~~~~~~~~~~~-~~--~~~s~~~q~~~~~ 314 (469)
....... .+ . ...++++|+||+++ .+| ||++++ +.+.+.+.... .+ +..+.....++.+
T Consensus 206 ~~~~~~~--~~-~----------~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~ 268 (405)
T 2vi8_A 206 AAGLHPN--PV-P----------YAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAV 268 (405)
T ss_dssp HTTSSCC--ST-T----------TCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHH
T ss_pred ccCcCCC--cc-c----------cCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHH
Confidence 2211111 11 1 12378899999997 566 999996 44544444432 22 2123333344444
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC-CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeC
Q 043923 315 LLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP 393 (469)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p 393 (469)
++.... ..++++.+++++++++++.+.|+++|+++..+ ..++++|+.++... .+..++.+.+ .++||.+.+
T Consensus 269 al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~ 340 (405)
T 2vi8_A 269 AFGEAL--QDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ-----LTGKTAEKVL-DEVGITVNK 340 (405)
T ss_dssp HHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHHH-HHHTEECEE
T ss_pred HHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCC-----CCHHHHHHHH-HHcCceecc
Confidence 554211 23567788889999999999999989888765 45789999987421 1122455554 567999999
Q ss_pred CCC----CCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHhhc
Q 043923 394 GSS----CHCTEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 394 g~~----f~~~~~~~iRi~~~~-----~~~e~i~~~l~~L~~~l~~~~ 432 (469)
|.. ++...++++|++++. ++++++++++++|++++++.+
T Consensus 341 g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 341 NTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp ECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred CcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 863 333345789999984 579999999999999987553
No 164
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.5e-26 Score=236.48 Aligned_cols=341 Identities=14% Similarity=0.097 Sum_probs=217.8
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC---CCCcHHHH--HHHH-HHHHhHcCCCCCCCCC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD---YHGLPAFK--KALV-EFMSEIRGNKVTFDTS 112 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~Lr--~aia-~~l~~~~~~~~~~~~~ 112 (469)
+.|+|..++|+. ++.+.+++.+.... .....|+. ..|...++ ++++ +++.+.++ .+
T Consensus 46 ~~i~l~~~~~~~-~~~v~~a~~~~~~~-----------~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g----~~-- 107 (447)
T 3h7f_A 46 DTLEMIASENFV-PRAVLQAQGSVLTN-----------KYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG----AE-- 107 (447)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGG-----------CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CS--
T ss_pred CceeEecCCCCC-CHHHHHHHHHHhcC-----------CccccCCcccccCccHHHHHHHHHHHHHHHHHcC----CC--
Confidence 569998888887 44455555442100 00011221 12334443 5555 66665544 23
Q ss_pred cEEE-eCChHHHHHHHHHHhcCCCCEEEEccCCCcChH-HH--Hhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 113 KIVL-TAGATSANETLMFCLAEPGEAFLLPTPYYPGFD-RD--LKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 113 ~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~-~~--~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
.+.+ ++|+++|+..++.+++++||+|+++.|+|..+. .. .... .+..+++++++. .++.+|++++++++++.
T Consensus 108 ~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-- 184 (447)
T 3h7f_A 108 FANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEF-- 184 (447)
T ss_dssp EEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHH--
T ss_pred ceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhc--
Confidence 2344 778889999999999999999999999997732 11 1111 155677777764 34679999999998653
Q ss_pred cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-ccccCCCCccchhhhhhccccccCCcCCeEEE
Q 043923 188 RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTQVWNRVHI 266 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~ 266 (469)
++++|++++|+||++. ++++|.++|++||+++|+||+|. ++.+.+.. .+.. + ...++
T Consensus 185 ---~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~-~~~~---~----------~~di~ 242 (447)
T 3h7f_A 185 ---RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLH-PSPV---P----------HADVV 242 (447)
T ss_dssp ---CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSS-CCST---T----------TCSEE
T ss_pred ---CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCC-CCCC---C----------CCcEE
Confidence 6788899899999987 47789999999999999999974 33333321 1211 1 22377
Q ss_pred EccCccccCCCcceEEEEEecCHHHHHHHHHh-ccc--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043923 267 VYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-SSF--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSG 343 (469)
Q Consensus 267 i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 343 (469)
+.|+||++ +|+|.||+++++.. .+.+... ..+ ++.....+.++..++.... ..+++..++++.++++++.+.
T Consensus 243 ~~s~sK~l--~G~~gG~i~~~~~~-~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~l~~~ 317 (447)
T 3h7f_A 243 STTVHKTL--GGGRSGLIVGKQQY-AKAINSAVFPGQQGGPLMHVIAGKAVALKIAA--TPEFADRQRRTLSGARIIADR 317 (447)
T ss_dssp EEESSGGG--CCCSCEEEEECGGG-HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCcCC--CCCCeEEEEECHHH-HHHHhhhcCCcccCCccHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHH
Confidence 89999987 47899999996544 3333332 222 2222333333333332211 223567778888889999999
Q ss_pred HHhc-----CCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCCCCeEEEEeec--
Q 043923 344 LEKA-----GISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRVCFAN-- 411 (469)
Q Consensus 344 L~~~-----g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~~~~iRi~~~~-- 411 (469)
|.+. |+++.. +..++++|+++..... ..+.+..+++++||.+. |+..+.+..++++|+++..
T Consensus 318 L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~ 391 (447)
T 3h7f_A 318 LMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL------DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALA 391 (447)
T ss_dssp HTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC------CHHHHHHHHHHTTEECBC-------------CEEEEECHHHH
T ss_pred HHhccccCCCeEEecCCCCCCEEEEEcCCCCC------CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHh
Confidence 9887 888764 3456788888863210 11345667778899998 6643344456789998743
Q ss_pred ---CCHHHHHHHHHHHHHHHHhhcc
Q 043923 412 ---MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 412 ---~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+++++++++++.|++++++..+
T Consensus 392 ~~~~~~eei~~~~~~l~~~l~~~~~ 416 (447)
T 3h7f_A 392 TRGFGDTEFTEVADIIATALATGSS 416 (447)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHSGGG
T ss_pred hCCCCHHHHHHHHHHHHHHHhccCc
Confidence 4789999999999999987644
No 165
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.95 E-value=2.6e-26 Score=234.87 Aligned_cols=344 Identities=10% Similarity=0.055 Sum_probs=216.9
Q ss_pred CCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCC-CCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 38 TGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDY-HGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 38 ~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
..+||++.+. +.+ +++.+.+++.+.... .. +... .+..++++++++.+.+.++ .+++
T Consensus 50 ~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~-------------~~-~~~~~~~~~~~~~~l~~~la~~~~----~~~~ 111 (449)
T 3a8u_X 50 RKVYDSLSGLWTCGAGHTRKEIQEAVAKQLST-------------LD-YSPGFQYGHPLSFQLAEKITDLTP----GNLN 111 (449)
T ss_dssp CEEEETTHHHHTCTTCBSCHHHHHHHHHHTTT-------------CS-CCCSSSCCCHHHHHHHHHHHTTSS----TTEE
T ss_pred CEEEECCccHhhccCCCCCHHHHHHHHHHHHh-------------CC-CccccccCCHHHHHHHHHHHHhCC----CCCC
Confidence 4578987665 444 346666666653211 11 1111 2334555666666655433 4678
Q ss_pred cEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCCcChHH-HHhhh-------------CCCEEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFCLAE--------PGEAFLLPTPYYPGFDR-DLKWR-------------TGVEIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~-~~~~~-------------~g~~~~~v~~~~~~~ 170 (469)
+|++|+|+++|+..++.++.. +||.|++.+|+|+++.. .+... .|+..+++|......
T Consensus 112 ~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~ 191 (449)
T 3a8u_X 112 HVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNA 191 (449)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGT
T ss_pred EEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCc
Confidence 999999999999999988753 67999999999987643 33322 023444444211111
Q ss_pred c-ccC--------HHHHHHHHHHHHhcCCceeEEEEecCC-CCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 171 F-QIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 171 ~-~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
| .+| ++++++++++.. ..++++ ++++|+ ||||. +.+.+.+++|.++|++||+++|+||+|.++...
T Consensus 192 ~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~ 268 (449)
T 3a8u_X 192 YSRGMPKEGGIALADELLKLIELHD--ASNIAA-VFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRT 268 (449)
T ss_dssp TCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred cccCChHHHHHHHHHHHHHHHHhcC--CCCEEE-EEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Confidence 1 135 889998887420 025554 556674 67996 567999999999999999999999999764332
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh-----------cccccCcHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM-----------SSFGLVSSQ 307 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~-----------~~~~~~s~~ 307 (469)
+.. ...+... ...+++ |+||+++ +| +|+||+++++ .+.+.+... ...+..+++
T Consensus 269 g~~--~~~~~~~--------~~~di~---s~sK~l~-~G~~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~t~~~~~~ 333 (449)
T 3a8u_X 269 GSM--FGADSFG--------VTPDLM---CIAKQVT-NGAIPMGAVIAST-EIYQTFMNQPTPEYAVEFPHGYTYSAHPV 333 (449)
T ss_dssp SSS--SHHHHHT--------CCCSEE---EECGGGG-TTSSCCEEEEEEH-HHHHHHHTCSSCTTSCSSCCCCTTTTCHH
T ss_pred Ccc--hhhhhcC--------CCCCEE---EEccccc-CCCCceEEEEECH-HHHHHhhccCcccccccccccCCCcccHH
Confidence 321 1112211 112322 8999998 68 9999999964 455544432 112235777
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccee--cCCceEEEEEecccccccCChhHHHHHHHHHH
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIV 384 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll 384 (469)
++.++.++|+... + +...++++++++++.+.|++++ ++.. .+..|+|+|++++....... .+..++...++
T Consensus 334 ~~aa~~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~~~~~~~l~ 407 (449)
T 3a8u_X 334 ACAAGLAALCLLQ---K--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAI-VRPFEAGMALW 407 (449)
T ss_dssp HHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCccccc-ccHHHHHHHHH
Confidence 8877777765321 1 1345566667777888887642 3221 12345789999875321110 02224667776
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+ +||.++|+. +++||++.. .+++++++++++|++++++.
T Consensus 408 ~-~Gv~v~~~g-------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 408 K-AGFYVRFGG-------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp H-HTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred H-CCcEEecCC-------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4 599999861 689999753 59999999999999998754
No 166
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.95 E-value=1.9e-26 Score=234.78 Aligned_cols=331 Identities=14% Similarity=0.114 Sum_probs=205.6
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccc-cccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRE-LALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
...+||++.+. +++ +++.+.+++.+..+. ... ...|+ .....+|++.++++++ .
T Consensus 64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~----------~~~~~~~~~-~~~~~~l~~~la~~~g----------~ 122 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKN----------LTICSRAFF-SVPLGICERYLTNLLG----------Y 122 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTT----------CSCCCTTSE-EHHHHHHHHHHHHHHT----------C
T ss_pred CCEEEEcccchhhcccCCCCHHHHHHHHHHHHh----------CCCccCCcC-CHHHHHHHHHHHhhcC----------C
Confidence 34679998864 344 346666666653111 000 01231 1223555555555542 5
Q ss_pred CcEEEeCChHHHHHHHHHHhc---------CCC-CEEEEccCCCcChHHHHhhhCC------------CEEEEeeccCCC
Q 043923 112 SKIVLTAGATSANETLMFCLA---------EPG-EAFLLPTPYYPGFDRDLKWRTG------------VEIVPIQCTSLN 169 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~---------~~g-d~Vl~~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~ 169 (469)
++|++++|+++|+..++.++. .+| |.|++.+|+|+++...+....| ..++.+|.
T Consensus 123 ~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~---- 198 (433)
T 1z7d_A 123 DKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY---- 198 (433)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT----
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC----
Confidence 799999999999999998753 467 9999999999876443222213 23444443
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchh
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIM 247 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~ 247 (469)
.|+++++++++. +++++| +++| +|+||.+ ++.+.+++|.++|++||+++|+||+|.++...+.. .. .
T Consensus 199 ---~d~~~le~~l~~-----~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~-~ 267 (433)
T 1z7d_A 199 ---DDLEALEEELKD-----PNVCAF-IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LC-V 267 (433)
T ss_dssp ---TCHHHHHHHHTS-----TTEEEE-EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SG-G
T ss_pred ---CCHHHHHHHhCC-----CCEEEE-EEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hh-h
Confidence 278999988841 267764 4556 5678975 78999999999999999999999999874333321 11 1
Q ss_pred hhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHH
Q 043923 248 EILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQN 324 (469)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~ 324 (469)
+... ....++ |+||++| +| +|+||+++++ .+.+.+... ...+..+++++.++.++|+... +
T Consensus 268 ~~~~--------~~~di~---t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~ 331 (433)
T 1z7d_A 268 HHYN--------VKPDVI---LLGKALS-GGHYPISAVLAND-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLI---N 331 (433)
T ss_dssp GGGT--------CCCSEE---EECGGGG-TTSSCCEEEEECH-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH---H
T ss_pred HhcC--------CCCCEE---EECcccc-CCCCCeEEEEECH-HHHhhhccccccccCCCCHHHHHHHHHHHHHHH---h
Confidence 1111 112222 8999999 89 9999999964 444333221 1122357777877777765321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC
Q 043923 325 YISENKKRLKQRHRKLVSGLEKA--GISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT 400 (469)
Q Consensus 325 ~~~~~~~~l~~~~~~l~~~L~~~--g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~ 400 (469)
+...++++++++++.+.|+++ +++.. .+..|+|+|+.++... .+..+++..++ ++||.+.|+
T Consensus 332 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~------ 397 (433)
T 1z7d_A 332 --EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL-----VNVLDICLKLK-ENGLITRDV------ 397 (433)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT-----CCHHHHHHHHH-HTTEECCEE------
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh-----hHHHHHHHHHH-HCCeEEecC------
Confidence 134455666667777777665 44321 1234578889886421 11335667766 569999985
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 401 EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 401 ~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+.+++|++++. .+++++++++++|++++++..+
T Consensus 398 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 398 HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDE 431 (433)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 25689998875 5999999999999999887654
No 167
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=9.7e-27 Score=236.65 Aligned_cols=341 Identities=13% Similarity=0.106 Sum_probs=212.9
Q ss_pred CCCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||++.+. |++. ++.+.+++.+.... .....|+ .....+|++++++++. .+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~-----------~~~~~~~-~~~~~~l~~~la~~~~---------~~ 109 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAER-----------GTSFGAP-TEIENKLAKLVIERVP---------SI 109 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHH-----------CSCCSSC-CHHHHHHHHHHHHHST---------TC
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhh-----------CcCcCCC-CHHHHHHHHHHHHhCC---------CC
Confidence 345689999875 5553 56677766653110 0011233 3455777777777652 47
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcc------------cCHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQ------------ITETA 177 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~d~~~ 177 (469)
++|++++|+++|+..++..+.. +++.|++.+|+|+++...+....|..+..++.....++. -|+++
T Consensus 110 ~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 110 EIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHH
T ss_pred CEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHH
Confidence 8999999999999999988753 678999999999876544332223222211111111111 17899
Q ss_pred HHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhcccc
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNC 255 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~ 255 (469)
+++++++.. .++++ ++++| +|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+.. ...+...
T Consensus 190 le~~l~~~~---~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~--~~~~~~~---- 258 (429)
T 3k28_A 190 VKYAFEQFG---DDIAC-VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN--CGQGYYG---- 258 (429)
T ss_dssp HHHHHHHHG---GGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT--HHHHHHT----
T ss_pred HHHHHHhCC---CCEEE-EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc--hHHHHhC----
Confidence 999887531 24555 55556 45566554 6888999999999999999999999885 33321 1112211
Q ss_pred ccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----cccccCcHHHHHHHHHHhcCchhhHHHHHHHH
Q 043923 256 ENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----SSFGLVSSQTQYLLSALLSDKKFTQNYISENK 330 (469)
Q Consensus 256 ~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 330 (469)
.... +.|+||++| +|+|+||+++++ .+.+.+... ...+..+++++.++.++|+..+ ++..
T Consensus 259 ----~~~d---i~t~sK~~~-~G~~iG~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~ 323 (429)
T 3k28_A 259 ----VTPD---LTCLGKVIG-GGLPVGAYGGKA-EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESY 323 (429)
T ss_dssp ----CCCS---EEEECGGGG-TTSCCEEEEECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHH
T ss_pred ----CCCc---eehhhhhhc-CCCCeEEEEEcH-HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHH
Confidence 1122 347999998 699999999954 444433321 1223478889998888887643 2344
Q ss_pred HHHHHHHHHHHHHHHhc----CC-ceecCCceEEEEEecccccc-------cCChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 331 KRLKQRHRKLVSGLEKA----GI-SCLKSNAGLFCWVDMRHLLR-------SNTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 331 ~~l~~~~~~l~~~L~~~----g~-~v~~~~~g~~~~v~~~~~~~-------~~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
++++++++++.+.|+++ ++ ...++. |.|+++.+..... ........+++..++ ++||.++|+.
T Consensus 324 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~--- 398 (429)
T 3k28_A 324 VEFERKAEMLEAGLRKAAEKHGIPHHINRA-GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ--- 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST---
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEEee-ccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC---
Confidence 55555556666666543 33 233333 4677777643210 011122345666665 5699999873
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 399 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 399 ~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+++|+++. .+++++++++++|++++++.+
T Consensus 399 ---~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 399 ---FEGLFLSTV-HSDADIEATIAAAEIAMSKLK 428 (429)
T ss_dssp ---TSCBCCCTT-CCHHHHHHHHHHHHHHHHTCC
T ss_pred ---CCCEEEECC-CCHHHHHHHHHHHHHHHHHHh
Confidence 346888765 599999999999999998653
No 168
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.95 E-value=2.7e-26 Score=234.07 Aligned_cols=328 Identities=15% Similarity=0.103 Sum_probs=217.4
Q ss_pred CCeeeeecccc--cc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc
Q 043923 38 TGIIQMGLAEN--QL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK 113 (469)
Q Consensus 38 ~~~i~L~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~ 113 (469)
..+||++.|.+ ++ +++.+.+++.+..+... .....|+ .....+|++.++++++ .++
T Consensus 76 ~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~---------~~~~~~~-~~~~~~l~~~la~~~g----------~~~ 135 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT---------LTSRAFY-NNVLGEYEEYITKLFN----------YHK 135 (439)
T ss_dssp CEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS---------CCCTTSE-ESSHHHHHHHHHHHHT----------CSE
T ss_pred CEEEEccCCcccccCCCCCHHHHHHHHHHHHhcC---------cccCccC-CHHHHHHHHHHHHhcC----------CCE
Confidence 45799988754 33 34666666655311100 0011232 2345777888877763 578
Q ss_pred EEEeCChHHHHHHHHHHhc---------CCC-CEEEEccCCCcChHH-HHhhhCC------------CEEEEeeccCCCC
Q 043923 114 IVLTAGATSANETLMFCLA---------EPG-EAFLLPTPYYPGFDR-DLKWRTG------------VEIVPIQCTSLNG 170 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~---------~~g-d~Vl~~~P~y~~~~~-~~~~~~g------------~~~~~v~~~~~~~ 170 (469)
|++++|+++|+..++.++. .+| |.|++.+|+|++... .+... | ..++.+|.+
T Consensus 136 v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~-g~~~~~~~~~p~~~~v~~~~~~---- 210 (439)
T 2oat_A 136 VLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSS-TDPTSYDGFGPFMPGFDIIPYN---- 210 (439)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTC-CCHHHHTTSCSCCTTEEEECSS----
T ss_pred EEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcC-CChhcccCCCCCCCCeEEeCCC----
Confidence 9999999999999998864 357 899999999987643 33332 4 456666542
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
|+++++++++. +++++|+ ++| +|++|. +++.+.+++|.++|++||+++|+||+|.++...+..+ . .+
T Consensus 211 ---d~~~le~~l~~-----~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~-~~ 279 (439)
T 2oat_A 211 ---DLPALERALQD-----PNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-A-VD 279 (439)
T ss_dssp ---CHHHHHHHTTS-----TTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-G-GG
T ss_pred ---CHHHHHHHhCC-----CCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-h-HH
Confidence 78999988741 2666555 556 567896 5699999999999999999999999998743333221 1 11
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh--cccccCcHHHHHHHHHHhcCchhhHHH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM--SSFGLVSSQTQYLLSALLSDKKFTQNY 325 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~ 325 (469)
... ....++ |+||++| +| +|+||+++++ .+.+.+... ...+..+++++.++.++|+... +
T Consensus 280 ~~~--------~~~Di~---t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~- 342 (439)
T 2oat_A 280 YEN--------VRPDIV---LLGKALS-GGLYPVSAVLCDD-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLE---E- 342 (439)
T ss_dssp GGT--------CCCSEE---EECGGGG-TTSSCCEEEEECH-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H-
T ss_pred HhC--------CCCcEE---Eeccccc-CCCCCeEEEEECH-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHh---h-
Confidence 111 112222 8999998 79 9999999964 444333321 1122367778877777765321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcee--cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 326 ISENKKRLKQRHRKLVSGLEKAGISCL--KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~~~g~~v~--~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
+...++++++++++.+.|+++++++. .+..|.|+|+.++.... .+..+++..++ ++||.+.|+ +++
T Consensus 343 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~----~~~~~l~~~l~-~~Gv~v~~~------~~~ 410 (439)
T 2oat_A 343 -ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD----WDAWKVCLRLR-DNGLLAKPT------HGD 410 (439)
T ss_dssp -TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS----CCHHHHHHHHH-HTTEECCBS------SSS
T ss_pred -hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc----HHHHHHHHHHH-HCCeEEecC------CCC
Confidence 23456677788889999988765431 12345788898864210 11335677766 569999974 257
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
++|++++. .+++++++++++|++++++
T Consensus 411 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 411 IIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 89998865 5999999999999998864
No 169
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=1.4e-26 Score=227.07 Aligned_cols=277 Identities=16% Similarity=0.174 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh----hhCCCEEEEeec
Q 043923 90 AFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK----WRTGVEIVPIQC 165 (469)
Q Consensus 90 ~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~----~~~g~~~~~v~~ 165 (469)
+|++++|++++ .+ +.+++++| ++|+..++.++.++||.|+++.|+|..+...+. .. |++++.++.
T Consensus 2 ~l~~~la~~~g--------~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 70 (331)
T 1pff_A 2 ALEGKIAKLEH--------AE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKF-GVEVDFIDM 70 (331)
T ss_dssp HHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHT-TCEEEEECT
T ss_pred hHHHHHHHHhC--------CC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhc-CCEEEEeCC
Confidence 68999999986 33 55555555 899999999999999999999999998876653 35 999998875
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEeccccccccCCCCcc
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-KNIHLISDEIYSGTVFSSPGFV 244 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-~~~~iI~Deay~~~~~~~~~~~ 244 (469)
.|++++++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|+...+..
T Consensus 71 -------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~---- 130 (331)
T 1pff_A 71 -------AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN---- 130 (331)
T ss_dssp -------TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----
T ss_pred -------CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC----
Confidence 267888887754 7899999999999999998 6668999999 999999999998643321
Q ss_pred chhhhhhccccccCCcCCeEEEEccCccccCCCcce-EEEEEecCHHHHHHHHHhccc--c-cCcHHHHHHHHHHhcCch
Q 043923 245 SIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFR-VGAIYSNDDMVVAAATKMSSF--G-LVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 245 s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR-iG~li~~~~~~~~~~~~~~~~--~-~~s~~~q~~~~~~l~~~~ 320 (469)
++ . .++++++.|+||+||.+|.| +||++++++.+.+.+...... + ..+++.+.++...+..
T Consensus 131 ~~-~------------~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-- 195 (331)
T 1pff_A 131 PL-D------------LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-- 195 (331)
T ss_dssp GG-G------------GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH--
T ss_pred hh-h------------cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch--
Confidence 11 1 25778999999999999999 799999653555555554433 2 3566666665555432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---------------CCceecC---CceEEEEEecccccccCChhHHHHHHHH
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA---------------GISCLKS---NAGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~---------------g~~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
.....+...++.+.+.+.+++. ++++.++ ..+.++.+.++. . +.+..
T Consensus 196 -----~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~ 260 (331)
T 1pff_A 196 -----LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---------L-EKAKK 260 (331)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---------H-HHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---------H-HHHHH
Confidence 2223333444445555555432 1222111 124566677651 1 23455
Q ss_pred HHHhCCeEEeCCCCCC------------------------CCCCCeEEEEeecC-CHHHHHHHHHHHHHH
Q 043923 383 IVYDVKLNISPGSSCH------------------------CTEPGWFRVCFANM-SEDTLKLSMQRLKAF 427 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~------------------------~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~ 427 (469)
.+.++||.+++++.-+ ...++++|++++.. ++++++.++++|+++
T Consensus 261 ~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 261 VLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 6678899887653111 01257999999863 677777777777643
No 170
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.2e-26 Score=231.34 Aligned_cols=322 Identities=13% Similarity=0.118 Sum_probs=219.2
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
++++|+.+.+.+++ +.+++.+. .....|.+..+..+|++++|++++ .+++++++
T Consensus 7 ~~~~l~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~~l~~~la~~~~----------~~~~~~~~ 60 (374)
T 3uwc_A 7 PYSYLERQFADIEP--YLNDLREF--------------IKTADFTLGAELEKFEKRFAALHN----------APHAIGVG 60 (374)
T ss_dssp CSCCHHHHTSSCHH--HHHHHHHH--------------HHHTCCSSCHHHHHHHHHHHHHTT----------CSEEEEES
T ss_pred eeeccccCCCCchH--HHHHHHHH--------------HHcCCcccChhHHHHHHHHHHHhC----------CCcEEEeC
Confidence 56889988888766 56655542 112246667788999999999985 33788999
Q ss_pred ChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 119 GATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 119 G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
|+++|+..++.++ +++||.|+++.|+|..+...+... |++++.++.+ .++.+|++++++++++ ++++|+
T Consensus 61 ~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~- 130 (374)
T 3uwc_A 61 TGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQA-GATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM- 130 (374)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC-
T ss_pred CHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-CCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE-
Confidence 9999999999999 999999999999999999888877 9999999987 4677899999988764 677766
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccchhhhhhccccccCCcCCeEEEEccCc--ccc
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS--KDL 274 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~ 274 (469)
|+||||.+.+ +++|.++|++||+++|+||+|+... ++... . . . -..+++.|+| |.+
T Consensus 131 --~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~------~-~--------~-~~d~~~~s~~~~K~l 189 (374)
T 3uwc_A 131 --PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDKF------V-G--------S-WGQFACFSLHPLKNL 189 (374)
T ss_dssp --CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE------T-T--------S-SSSEEEEECSSSSSS
T ss_pred --EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCee------c-c--------c-cccEEEEeCCCCCcC
Confidence 8999999887 5568889999999999999998532 22111 1 0 0 1245667766 999
Q ss_pred CCCcceEEEEEecCHHHHHHHHHhccc-----------c---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHH
Q 043923 275 GLPGFRVGAIYSNDDMVVAAATKMSSF-----------G---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKL 340 (469)
Q Consensus 275 g~~GlRiG~li~~~~~~~~~~~~~~~~-----------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 340 (469)
|.+|. .|+++++++.+.+.+...... + ..+.+...+....+ .. +++..++.++..+++
T Consensus 190 ~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~--~~-----~~~~~~~~~~~~~~l 261 (374)
T 3uwc_A 190 NVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM--NQ-----LETITEKRRGIAHLY 261 (374)
T ss_dssp CCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG--GG-----HHHHHHHHHHHHHHH
T ss_pred Cccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH--HH-----HHHHHHHHHHHHHHH
Confidence 85475 899998777666555443321 0 12233322222222 11 344555556667778
Q ss_pred HHHHHhcC--Cceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC--------------C---
Q 043923 341 VSGLEKAG--ISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC--------------T--- 400 (469)
Q Consensus 341 ~~~L~~~g--~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~--------------~--- 400 (469)
.+.|.+++ +.+.. +.++...|+.++-.. .+..++.+.| .++||.++++..... .
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (374)
T 3uwc_A 262 DQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPM 335 (374)
T ss_dssp HHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHH
T ss_pred HHHhccCCCeEEeccCCCCCceeeEEEEEEc-----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCcc
Confidence 88888774 54432 222222221111000 1122455555 466999998851100 0
Q ss_pred ----CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 401 ----EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 401 ----~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
..+.+|+++.. .+++++++++++|++++++.
T Consensus 336 ~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 336 AEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 01579999876 59999999999999999764
No 171
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=2.3e-26 Score=235.66 Aligned_cols=339 Identities=12% Similarity=0.032 Sum_probs=213.1
Q ss_pred Ceeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 39 GIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 39 ~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
.+||+..+ .+.+. ++.+.+++.+.. .....+....+..+...++++.+.+.++ ...++|
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~L~e~la~~~~----~~~~~v 138 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQL-------------RVMNHVMFGGLTHEPAARLAKLLVDITP----AGLDTV 138 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHH-------------HHCSCCCSSSEECHHHHHHHHHHHHHSS----TTEEEE
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC----CCcCEE
Confidence 67888876 56664 566666665531 1111111011122344444444444432 456799
Q ss_pred EEeCChHHHHHHHHHHhcC-------CC-CEEEEccCCCcChHHHHhhhCC-------------CEEEEeeccCCCCccc
Q 043923 115 VLTAGATSANETLMFCLAE-------PG-EAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCTSLNGFQI 173 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~-------~g-d~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~ 173 (469)
++++|+++|+..+++.+.. +| +.|++.+|+|.++...+....+ ..+..++.+.......
T Consensus 139 ~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 218 (457)
T 3tfu_A 139 FFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPA 218 (457)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHH
T ss_pred EEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHH
Confidence 9999999999999988764 55 5899999999876544332201 1222233322111124
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
|+++|++++++. ..++++|++.. ++||+|.++ +.+.+++|.++|++||+++|+||+|.++...+.. .. .+...
T Consensus 219 d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~-~a-~~~~~ 293 (457)
T 3tfu_A 219 YSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGAL-FA-ADHAG 293 (457)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-ST-HHHHT
T ss_pred HHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccch-hH-hHhcC
Confidence 788899888742 12677777777 789999876 7788999999999999999999999985333332 11 12211
Q ss_pred ccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-------hcccccCcHHHHHHHHHHhcCchhhH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-------MSSFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
..++++ ||||+++ .| +|+||+++++ .+.+.+.. ....+..+++++.++.++|+....
T Consensus 294 --------~~pdii---t~sK~l~-gG~~~lG~v~~~~-~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~-- 358 (457)
T 3tfu_A 294 --------VSPDIM---CVGKALT-GGYLSLAATLCTA-DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG-- 358 (457)
T ss_dssp --------CCCSEE---EECGGGG-TTSSCCEEEEEEH-HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--
T ss_pred --------CCceEE---EEChhhh-CCCcceEEEEEcH-HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--
Confidence 223333 8999987 56 7999999954 45444431 112234678888887777652110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC 399 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~ 399 (469)
+...+++++..+++.+.|+++ ++....+. |+|+++.++... +..+++..++ ++||.++|.
T Consensus 359 ---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~l~~~~------~~~~~~~~l~-~~Gv~v~~~----- 422 (457)
T 3tfu_A 359 ---QDWRTRITELAAGLTAGLDTARALPAVTDVRVC-GAIGVIECDRPV------DLAVATPAAL-DRGVWLRPF----- 422 (457)
T ss_dssp ---SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEEESSCC------CHHHHHHHHH-HTTEECCCB-----
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecC-CeEEEEEECCcc------cHHHHHHHHH-HCCeEEEec-----
Confidence 122344455556666666654 23333344 478888886531 1335667766 459999874
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 400 TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 400 ~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+++|+++.. .+++++++++++|++++++..
T Consensus 423 --~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 423 --RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 2589999765 499999999999999998653
No 172
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=2.5e-26 Score=231.57 Aligned_cols=286 Identities=16% Similarity=0.193 Sum_probs=190.8
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----Hhhh
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWR 155 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~ 155 (469)
.+|+. .+..+|++++|++++ . .+.|++++| ++|+..++. ++++||.|+++.|.|.+.... ++..
T Consensus 62 ~r~~~-p~~~~l~~~la~~~g--------~-~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~ 129 (403)
T 3cog_A 62 SRSGN-PTRNCLEKAVAALDG--------A-KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEF 129 (403)
T ss_dssp ----C-HHHHHHHHHHHHHHT--------C-SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGG
T ss_pred cCCCC-chHHHHHHHHHHHhC--------C-CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHc
Confidence 34553 357899999999986 2 266777766 589999998 889999999999999875443 3455
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC-eEEEEecccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN-IHLISDEIYS 234 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~-~~iI~Deay~ 234 (469)
|++++.++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++| +++|+||+|+
T Consensus 130 -G~~v~~v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~ 192 (403)
T 3cog_A 130 -GLKISFVDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFM 192 (403)
T ss_dssp -TCEEEEECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTT
T ss_pred -CCEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCc
Confidence 9999999864 67888888764 8999999999999999998 666899999999 9999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhcc-cc-cCcHHHHHH
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSS-FG-LVSSQTQYL 311 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~ 311 (469)
.+.+. . + + ..+.+++++|+||.+|.+| +|+||++++++.+.+.+..... ++ ..+++.+.+
T Consensus 193 ~~~~~-~---~---~----------~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~ 255 (403)
T 3cog_A 193 SPYFQ-R---P---L----------ALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYL 255 (403)
T ss_dssp CTTTC-C---T---T----------TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred ccccC-C---c---c----------ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 75432 1 1 1 1156789999999998766 5799999966666555444332 22 357778877
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---------------CCceecC----CceEEEEEecccccccCC
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA---------------GISCLKS----NAGLFCWVDMRHLLRSNT 372 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~---------------g~~v~~~----~~g~~~~v~~~~~~~~~~ 372 (469)
+.+.++.. ..+.++..++...+.+.|+++ ++++.++ .++++. +.+++.
T Consensus 256 ~~~~l~~l-------~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~-~~l~~~----- 322 (403)
T 3cog_A 256 CNRGLKTL-------HVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVT-FYIKGT----- 322 (403)
T ss_dssp HHHHHTTH-------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEE-EEESSC-----
T ss_pred HHhhhhHH-------HHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEE-EEecCC-----
Confidence 77777653 222333344444455555443 2333222 255554 466531
Q ss_pred hhHHHHHHHHHHHhCCeEEeC---C----------CCCCC-----------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 373 FEAEMELWKKIVYDVKLNISP---G----------SSCHC-----------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 373 ~~~~~~l~~~ll~~~GI~v~p---g----------~~f~~-----------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
. +...+++++.||.++. | +.+.. ..++++|||++. ++.+..++.|.+++
T Consensus 323 -~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al 395 (403)
T 3cog_A 323 -L---QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQAL 395 (403)
T ss_dssp -H---HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred -H---HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHH
Confidence 0 1244556677886542 2 11111 125799999985 33455566666665
Q ss_pred Hhh
Q 043923 429 DSI 431 (469)
Q Consensus 429 ~~~ 431 (469)
++.
T Consensus 396 ~~~ 398 (403)
T 3cog_A 396 KAA 398 (403)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 173
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.6e-26 Score=232.03 Aligned_cols=285 Identities=14% Similarity=0.176 Sum_probs=198.0
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh----hCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW----RTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~----~~g~~~~~v 163 (469)
..+|++.++++++ .+.+++++|+++|+..++.+++++||.|+++.|+|.++...+.. . |++++.+
T Consensus 83 ~~~l~~~la~~~g----------~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-g~~~~~v 151 (414)
T 3ndn_A 83 VSVFEERLRLIEG----------APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRW-GVQTVFV 151 (414)
T ss_dssp HHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHc-CcEEEEe
Confidence 4556666666653 46789999999999999999999999999999999998766643 5 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCc
Q 043923 164 QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGF 243 (469)
Q Consensus 164 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~ 243 (469)
+.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+...+...
T Consensus 152 ~~~-------d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~-- 213 (414)
T 3ndn_A 152 DGD-------DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQG-- 213 (414)
T ss_dssp CTT-------CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCC--
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCc--
Confidence 864 78999988864 7899999999999999987 56689999999999999999984322211
Q ss_pred cchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-hcccc-cCcHHHHHHHHHHhcCch
Q 043923 244 VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK-MSSFG-LVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 244 ~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~ 320 (469)
+ ..+.++++.|+||.+|.+| +++|+++++++.+.+.+.. ...++ ..++...+++...++.
T Consensus 214 --~-------------~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-- 276 (414)
T 3ndn_A 214 --F-------------PLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-- 276 (414)
T ss_dssp --G-------------GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG--
T ss_pred --h-------------hcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH--
Confidence 1 1145688899999999778 8999999976655433332 22222 2445544444443322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecCC----------------ceEEEEEecccccccCChhHHHHHHHH
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKSN----------------AGLFCWVDMRHLLRSNTFEAEMELWKK 382 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~~----------------~g~~~~v~~~~~~~~~~~~~~~~l~~~ 382 (469)
+..+.++..++++.+.+.|+++ ++. +..|. .|.++++.+++... ...+....++..
T Consensus 277 -----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~ 350 (414)
T 3ndn_A 277 -----LAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDK 350 (414)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHh
Confidence 3445566677778888888876 332 22221 46789999874200 001222234443
Q ss_pred HHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 383 IVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
++..++.+.+|..+.. ..++++|||++. |+.+.+++.|++++
T Consensus 351 -l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 351 -MRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp -CSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred -CccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 3456777777765432 135799999985 55677777777765
No 174
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=1.1e-26 Score=233.12 Aligned_cols=324 Identities=12% Similarity=0.157 Sum_probs=213.9
Q ss_pred CCCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCC-CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcE
Q 043923 36 NPTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQ-DYHGLPAFKKALVEFMSEIRGNKVTFDTSKI 114 (469)
Q Consensus 36 ~~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i 114 (469)
+..++++|+.+.+.+++.. .+++.+. -....|+ +..+..+|++++|++++ .+++
T Consensus 20 ~~~~~~~l~~~~p~~~~~~-~~a~~~~--------------~~~~~~~~~~~~~~~l~~~la~~~~----------~~~~ 74 (391)
T 3dr4_A 20 HMSDLPRISVAAPRLDGNE-RDYVLEC--------------MDTTWISSVGRFIVEFEKAFADYCG----------VKHA 74 (391)
T ss_dssp --------CCCCCCCCSSH-HHHHHHH--------------HHHTCCSSCSHHHHHHHHHHHHHHT----------CSEE
T ss_pred hcCCCceeccCCCCCCHHH-HHHHHHH--------------HHcCCccCCChHHHHHHHHHHHHhC----------CCcE
Confidence 3457899999988777443 3333331 1112455 56788999999999996 2378
Q ss_pred EEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 115 VLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
++++|+++|+..++.++ +++||.|+++.|+|..+...+... |++++.+++++ .++.+|++++++++++ +++
T Consensus 75 i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~------~~~ 146 (391)
T 3dr4_A 75 IACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYC-GATPVLVDNDP-RTFNLDAAKLEALITP------RTK 146 (391)
T ss_dssp EEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTCSBCGGGSGGGCCT------TEE
T ss_pred EEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHC-CCEEEEEecCc-cccCcCHHHHHHhcCC------Cce
Confidence 88999999999999999 899999999999999999888877 99999999874 3578899999988764 777
Q ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccchhhhhhccccccCCcCCeEEEEccCc-
Q 043923 194 GVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS- 271 (469)
Q Consensus 194 ~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S- 271 (469)
+|+ |+||||...+ +++|.++|+++|+++|+|++|+... +.+.. .. ... .+.+.|||
T Consensus 147 ~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~------------~~~-di~~~S~s~ 204 (391)
T 3dr4_A 147 AIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SG------------SLG-DCATFSFFG 204 (391)
T ss_dssp EEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TT------------SSS-SEEEEECBT
T ss_pred EEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCee---ec------------ccC-CEEEEECCC
Confidence 766 5789999877 5558889999999999999998422 22111 00 111 25566766
Q ss_pred -cccCCCcceEEEEEecCHHHHHHHHHhcccc----------------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHH
Q 043923 272 -KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG----------------LVSSQTQYLLSALLSDKKFTQNYISENKKRLK 334 (469)
Q Consensus 272 -K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~----------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~ 334 (469)
|.++ |.+.|+++++++.+.+.+......+ ..+.+...+ .+... ..+++..++.+
T Consensus 205 ~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~--~~~~~-----~~~~~~~~~~~ 275 (391)
T 3dr4_A 205 NAIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAI--GLAQL-----ERVDEHLAARE 275 (391)
T ss_dssp TSSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHH--HHHHH-----HTHHHHHHHHH
T ss_pred CCcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHH--HHHHH-----HHHHHHHHHHH
Confidence 7764 4578999998776665554433211 122222222 22211 12344556666
Q ss_pred HHHHHHHHHHHhcCCceecC------Cce-EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCC---CCC----
Q 043923 335 QRHRKLVSGLEKAGISCLKS------NAG-LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSC---HCT---- 400 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~~~------~~g-~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f---~~~---- 400 (469)
+..+++.+.|.+.|+.+..+ ..+ +.+++.++.... .+..++.+.|. ++||.+++|... .+.
T Consensus 276 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~~~~ 350 (391)
T 3dr4_A 276 RVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLS----TTRDQVIKDLD-ALGIESRPVFHPMHIMPPYAHL 350 (391)
T ss_dssp HHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCS----SCHHHHHHHHH-HTTCCCEECCCCGGGSGGGGGG
T ss_pred HHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccc----hhHHHHHHHHH-HCCCceeecCCccccChhhhhc
Confidence 67778888888888776654 122 234666653100 11235666655 569999987511 000
Q ss_pred -----------CCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 401 -----------EPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 401 -----------~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
....+|+++.. ++++++++++++|++++
T Consensus 351 ~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 351 ATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred CcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 13479999876 59999999999998764
No 175
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=1.4e-26 Score=235.22 Aligned_cols=338 Identities=12% Similarity=0.070 Sum_probs=207.3
Q ss_pred CCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++. ++.+.+++.+.. .....|.. ..+++.++++++.+.++ .++
T Consensus 51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~---~~~~~~~la~~l~~~~~-----~~~ 109 (427)
T 3fq8_A 51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAM-------------EKGTSFGA---PCALENVLAEMVNDAVP-----SIE 109 (427)
T ss_dssp SCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------TTCSCCSS---CCHHHHHHHHHHHHHST-----TCS
T ss_pred CCEEEECCCchhhhccCCCCHHHHHHHHHHH-------------HhCCCcCC---CCHHHHHHHHHHHHhCC-----CCC
Confidence 44689999875 5553 566666666531 11122322 24666777777766543 478
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCCE-------------------EEEeeccCCCCc
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGVE-------------------IVPIQCTSLNGF 171 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~~-------------------~~~v~~~~~~~~ 171 (469)
+|++++|+++|+..++.... ..++.|++..|+|+++...+....|.. ++.+|.+
T Consensus 110 ~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 184 (427)
T 3fq8_A 110 MVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN----- 184 (427)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----
Confidence 99999999999999994432 235789999999987544332221211 3333321
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEIL 250 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~ 250 (469)
|++++++++++. ..++++|+++.++|++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+.. ...+..
T Consensus 185 --d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~--~~~~~~ 256 (427)
T 3fq8_A 185 --DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG--GVQEKF 256 (427)
T ss_dssp --CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT--HHHHHT
T ss_pred --CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc--hhhHhc
Confidence 789999988752 125666565555677887665 566999999999999999999999975 33321 111111
Q ss_pred hccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----cccccCcHHHHHHHHHHhcCchhhHHH
Q 043923 251 KDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----SSFGLVSSQTQYLLSALLSDKKFTQNY 325 (469)
Q Consensus 251 ~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~ 325 (469)
. .... +.|+||++| +|+|+||++++ +.+.+.+... ...+..+++++.++.++++.... ++.
T Consensus 257 ~--------~~~d---i~t~sK~~~-~G~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~ 322 (427)
T 3fq8_A 257 G--------VTPD---LTTLGKIIG-GGLPVGAYGGK-REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGT 322 (427)
T ss_dssp T--------CCCS---EEEECGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTH
T ss_pred C--------CCCC---hhhhhhhhh-CCcceEEEEEc-HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCH
Confidence 1 1112 358999999 89999999984 4444444321 12223577888887777652211 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEeccccccc-------CChhHHHHHHHHHHHhCCeEEeCCCCCC
Q 043923 326 ISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRS-------NTFEAEMELWKKIVYDVKLNISPGSSCH 398 (469)
Q Consensus 326 ~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~-------~~~~~~~~l~~~ll~~~GI~v~pg~~f~ 398 (469)
.++.++..+..++.|.+.+.+.++....+..|+++|+.++..... .......+++..++ ++||.++|+..
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~-- 399 (427)
T 3fq8_A 323 YEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF-- 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC--
Confidence 233333333333344444444455444444568889988642110 11112335666665 56999998753
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 399 CTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 399 ~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
..+|+++. .+++++++++++|++++++
T Consensus 400 ----~r~~~~~~-~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 400 ----EAGFTSLA-HTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ----SCEECCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEeeCc-CCHHHHHHHHHHHHHHHHh
Confidence 23555544 4999999999999999875
No 176
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.95 E-value=1.7e-26 Score=237.27 Aligned_cols=320 Identities=15% Similarity=0.187 Sum_probs=207.3
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CEEEEccCCCcChHHH
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP-----G----EAFLLPTPYYPGFDRD 151 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-----g----d~Vl~~~P~y~~~~~~ 151 (469)
.|.+..+..+|++++|++++ .+++++|+|+++|+..++.+++++ | |.|++..+.|..+...
T Consensus 69 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~ 138 (467)
T 2oqx_A 69 AYSGSRSYYALAESVKNIFG----------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGH 138 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHH
T ss_pred eeccCchhHHHHHHHHHHhC----------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhh
Confidence 57777788999999999985 368999999999999999999888 8 9888774444433344
Q ss_pred HhhhCCCEEEEeec----cCC----CCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCC-CCCCCHHHHHHHHHHHHh
Q 043923 152 LKWRTGVEIVPIQC----TSL----NGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPL-GTTMSRNELNLLVNIITE 222 (469)
Q Consensus 152 ~~~~~g~~~~~v~~----~~~----~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPt-G~~~s~e~l~~l~~~~~~ 222 (469)
.... |..++.... +.. .++.+|+++|++++++.. .+++++|++++|+||| |.+++.+++++|.++|++
T Consensus 139 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 139 SQIN-GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp HHHT-TCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred hhcc-CcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 4444 777665421 111 235689999999997521 1268999999999998 999999999999999999
Q ss_pred cCeEEEEeccccc----------cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCC-cceEEEEEecCH--
Q 043923 223 KNIHLISDEIYSG----------TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLP-GFRVGAIYSNDD-- 289 (469)
Q Consensus 223 ~~~~iI~Deay~~----------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-GlRiG~li~~~~-- 289 (469)
||++||+|+++.. ..+.+. +...+..+. ....+ +++.|+||++|++ | ||++++++
T Consensus 216 ~gi~li~D~a~~~e~~~~~~~~~~~~~g~---~~~~~~~~~----~~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~ 283 (467)
T 2oqx_A 216 YDIPVVMDSARFAENAYFIKQREAEYKDW---TIEQITRET----YKYAD--MLAMSAKKDAMVPMG---GLLCMKDDSF 283 (467)
T ss_dssp TTCCEEEECTTHHHHHHHHHHHCGGGTTS---CHHHHHHHH----GGGCS--EEEEESSSTTCCSSC---EEEEECSGGG
T ss_pred cCCEEEEEchhhhhhhhhcccccccccCc---cHHHHhhhh----hccCC--eEEEecccccCCCCc---eEEEecChhH
Confidence 9999999966542 112222 232221000 00113 3467999999877 5 88888665
Q ss_pred -HHHHHHHHhc-------ccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEE
Q 043923 290 -MVVAAATKMS-------SFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCW 361 (469)
Q Consensus 290 -~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~ 361 (469)
.....++... .++..+.....++...+.. ++. +...+...++++++.+.|++.++++. +.+++++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~--~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~ 357 (467)
T 2oqx_A 284 FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD--GMN---LDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAF 357 (467)
T ss_dssp HHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH--TTC---HHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEE
T ss_pred HHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh--hhh---HHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEE
Confidence 2222222221 1111222222222222111 100 12233445677888889988888887 77789999
Q ss_pred Eeccc---ccccCChhHHHHHHHHHHHhCCeEEeCCCCC--CC---------CCCCeEEEEeec--CCHHHHHHHHHHHH
Q 043923 362 VDMRH---LLRSNTFEAEMELWKKIVYDVKLNISPGSSC--HC---------TEPGWFRVCFAN--MSEDTLKLSMQRLK 425 (469)
Q Consensus 362 v~~~~---~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f--~~---------~~~~~iRi~~~~--~~~e~i~~~l~~L~ 425 (469)
++++. ......+ +...++..|+.++||.+.|+..| +. ...+++|++++. .+++++++++++|+
T Consensus 358 ~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~ 436 (467)
T 2oqx_A 358 VDAGKLLPHIPADQF-PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFK 436 (467)
T ss_dssp EEHHHHSTTSCGGGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHH
T ss_pred EechhhcccCCcccc-cHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHH
Confidence 98853 1111111 13345677756779999985532 11 013799999984 48999999999999
Q ss_pred HHHHhhc
Q 043923 426 AFVDSIT 432 (469)
Q Consensus 426 ~~l~~~~ 432 (469)
+++++.+
T Consensus 437 ~~l~~~~ 443 (467)
T 2oqx_A 437 HVKENAA 443 (467)
T ss_dssp HHHHSGG
T ss_pred HHHhhhh
Confidence 9998654
No 177
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.94 E-value=1.4e-25 Score=225.39 Aligned_cols=282 Identities=17% Similarity=0.172 Sum_probs=200.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~ 162 (469)
...+|++.+|++++ .+++++++|+++|+..++.+++++||.|+++.|.|.++...+ ... |++++.
T Consensus 67 ~~~~l~~~la~~~g----------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~-g~~~~~ 135 (392)
T 3qhx_A 67 TRTALEAALAAVED----------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGW-NVEYTP 135 (392)
T ss_dssp HHHHHHHHHHHHTT----------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGG-TCEEEE
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhc-CcEEEE
Confidence 45788888888874 347889999999999999999999999999999998776655 455 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|++|+..++ ..
T Consensus 136 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~- 197 (392)
T 3qhx_A 136 VALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQ- 197 (392)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC-
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CC-
Confidence 9864 78999988864 8999999999999999988 66689999999999999999985321 11
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHhcc-c-ccCcHHHHHHHHHHhcCc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSS-F-GLVSSQTQYLLSALLSDK 319 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~~~ 319 (469)
.. ..+.++++.|+||.+|.+| +|+||++++++.+.+.+..... . ...++..++++...++..
T Consensus 198 ---~~------------~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l 262 (392)
T 3qhx_A 198 ---PL------------SLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL 262 (392)
T ss_dssp ---GG------------GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH
T ss_pred ---hH------------HhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH
Confidence 11 1245688999999999777 8999999976555555443332 2 235667777776666552
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CceEEEEEecccccccCChhHHHHHHH
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS----------------NAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
..+.++..++.+.+.+.|+++ .+. +..| ..|.++++.+++.. .....++.
T Consensus 263 -------~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~-----~~~~~~~~ 330 (392)
T 3qhx_A 263 -------VLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR-----TAAEQLCA 330 (392)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH-----HHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH-----HHHHHHHH
Confidence 334455566777788888776 332 2211 12567888887421 11223333
Q ss_pred HHHHhCCeEEeCCCCCCC------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 382 KIVYDVKLNISPGSSCHC------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.++..|+.+..|+.+.. ..++.||||++. ++.+..++.|.+++
T Consensus 331 -~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 331 -KTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp -HCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred -hCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 34456777777765321 135789999985 45666666666654
No 178
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=9.4e-26 Score=228.50 Aligned_cols=302 Identities=14% Similarity=0.146 Sum_probs=201.7
Q ss_pred cCCCCCC----cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhh
Q 043923 81 LFQDYHG----LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWR 155 (469)
Q Consensus 81 ~Y~~~~g----~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~ 155 (469)
.|++..| ..++++.++++++ .+ ++++++++++|+..++.++ +++||.|+++.|+|..+...+...
T Consensus 33 ~~~~~~g~~~l~~~l~~~la~~~g--------~~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~ 102 (418)
T 2c81_A 33 ISGYWTGEESMERKFAKAFADFNG--------VP--YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNV 102 (418)
T ss_dssp TTSBCCSSCCHHHHHHHHHHHHHT--------CS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT
T ss_pred ccCcccCCHHHHHHHHHHHHHHhC--------CC--cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHHc
Confidence 4766667 4555555555553 22 5666777789999999999 899999999999999999888877
Q ss_pred CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 156 TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 156 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
|++++.+++++ ++|.+|++++++++++ ++++|+++ ||||...+ +++|.++|++||++||+||+|+.
T Consensus 103 -g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~~~~~~~~~li~D~a~~~ 168 (418)
T 2c81_A 103 -NALPVFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMAN---MDEINEIAQEHNLFVIEDCAQSH 168 (418)
T ss_dssp -TCEEEEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCCC---HHHHHHHHHHTTCEEEEECTTCT
T ss_pred -CCEEEEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCccc---HHHHHHHHHHCCCEEEEECcccc
Confidence 99999999874 3678999999988764 78887764 58998765 66688999999999999999987
Q ss_pred cc-cCCCCccchhhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhccccc---------
Q 043923 236 TV-FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL--------- 303 (469)
Q Consensus 236 ~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~--------- 303 (469)
+. +++.. +..+ . .+.+.|| ||.+|. | |+||++++++.+.+.+......+.
T Consensus 169 ~~~~~~~~---~~~~------------~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 230 (418)
T 2c81_A 169 GSVWNNQR---AGTI------------G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSEL 230 (418)
T ss_dssp TCEETTEE---TTSS------------S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGC
T ss_pred cCccCCEe---cccc------------c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCcccccccccc
Confidence 54 33221 1111 1 2556677 999995 8 999999965555444433221110
Q ss_pred ----C------c--------HHHHHHHH-HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee-cCCc-eEEEE
Q 043923 304 ----V------S--------SQTQYLLS-ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL-KSNA-GLFCW 361 (469)
Q Consensus 304 ----~------s--------~~~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~~-g~~~~ 361 (469)
. . ...+.++. ..+. .+++..++.++.++++.+.|+++ |+++. ++.+ +...|
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 303 (418)
T 2c81_A 231 MHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ-------ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY 303 (418)
T ss_dssp CTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred ccchhhccccccccCcCCCcCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence 0 0 11111111 1111 13445555566678888889877 77776 4444 33222
Q ss_pred ----EecccccccCChhHHHHHHHHHHHhCCeE---EeCCCCCC---------------------------CCC------
Q 043923 362 ----VDMRHLLRSNTFEAEMELWKKIVYDVKLN---ISPGSSCH---------------------------CTE------ 401 (469)
Q Consensus 362 ----v~~~~~~~~~~~~~~~~l~~~ll~~~GI~---v~pg~~f~---------------------------~~~------ 401 (469)
+.++..... . .+..++.+.|.+++||. +.++.... ..-
T Consensus 304 ~~~~~~~~~~~~~-~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (418)
T 2c81_A 304 YGYVFRFDPVKFG-G-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERA 381 (418)
T ss_dssp SEEEEEECGGGTT-T-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHH
T ss_pred EEEEEEEcccccc-c-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHH
Confidence 666531000 0 12335667666555999 88875210 000
Q ss_pred -CCeEEEEeec-C-CHHHHHHHHHHHHHHHHhhcc
Q 043923 402 -PGWFRVCFAN-M-SEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 402 -~~~iRi~~~~-~-~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.+.+||++.. + +++++++++++|++++++.+.
T Consensus 382 ~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 382 SGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp HHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred HhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 1489999965 6 899999999999999987766
No 179
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=2.5e-25 Score=223.99 Aligned_cols=282 Identities=16% Similarity=0.153 Sum_probs=195.2
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIV 161 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~ 161 (469)
....+|++.++++++ . + +.++++++++|+..++.+++++||.|+++.|.|.++...+ ... |++++
T Consensus 65 ~~~~~l~~~la~~~g--------~-~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~ 133 (398)
T 1gc0_A 65 PTLNLLEARMASLEG--------G-E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEF-GVKLR 133 (398)
T ss_dssp HHHHHHHHHHHHHHT--------C-S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGG-TCEEE
T ss_pred hHHHHHHHHHHHHhC--------C-C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHc-CCEEE
Confidence 356788888888875 2 2 4555555579999999999999999999999999887665 455 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+||+|..+.+..
T Consensus 134 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~- 196 (398)
T 1gc0_A 134 HVDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR- 196 (398)
T ss_dssp EECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC-
T ss_pred EECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88753 78889888764 8899999999999999997 6668999999999999999998654321
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcc--c-ccCcHHHHHHHHHHhc
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSS--F-GLVSSQTQYLLSALLS 317 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~--~-~~~s~~~q~~~~~~l~ 317 (469)
. + ..+.++++.|+||.+|.+|.|+ ||++++++.+...+..... + +..+++.++++.+.++
T Consensus 197 ---~---~----------~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 1gc0_A 197 ---P---L----------ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIK 260 (398)
T ss_dssp ---G---G----------GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred ---c---h----------hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence 1 1 1146788899999999999998 9999966555433433222 2 2367777777666665
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-C--------------ceecC---CceEEEEEecccccccCChhHHHHH
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAG-I--------------SCLKS---NAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~--------------~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
. +..+.++..++.+.+.+.|++++ + ++..+ ..|.++.+.++.. .+.
T Consensus 261 ~-------~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~ 324 (398)
T 1gc0_A 261 T-------LNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG---------IGA 324 (398)
T ss_dssp T-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTH---------HHH
T ss_pred h-------HHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC---------HHH
Confidence 3 23444555666677777777642 1 11111 1234555676531 123
Q ss_pred HHHHHHhCCeEEeC---CCCC------------C---------CCCCCeEEEEeecC-CHHHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISP---GSSC------------H---------CTEPGWFRVCFANM-SEDTLKLSMQRLKAF 427 (469)
Q Consensus 380 ~~~ll~~~GI~v~p---g~~f------------~---------~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~ 427 (469)
...++.+.||.++. |+.. . ...++++|||++.. ++++++.+.++|+++
T Consensus 325 ~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 325 GRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 55667778888776 3220 0 01257999999863 566666666666543
No 180
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=3.7e-26 Score=234.75 Aligned_cols=296 Identities=12% Similarity=0.058 Sum_probs=205.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE---EEEccCCCcChHH----HHhhhCCCEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEA---FLLPTPYYPGFDR----DLKWRTGVEI 160 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~---Vl~~~P~y~~~~~----~~~~~~g~~~ 160 (469)
..++++.+|++++ .++++|++|+|+++++..++.++.++|+. |+++.|+|++... .++.. |+++
T Consensus 113 ~~~l~~~la~~~g--------~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~-G~~~ 183 (465)
T 3e9k_A 113 DESIVGLMKDIVG--------ANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLNI 183 (465)
T ss_dssp THHHHGGGHHHHT--------CCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHT-TCCH
T ss_pred HHHHHHHHHHHcC--------CCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHc-CCcc
Confidence 3668888888875 56899999999999999999999877655 9999999987443 44545 8775
Q ss_pred E-----EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 161 V-----PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 161 ~-----~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
. .+|.+ +++.+|+++++++|++. ++++++|++++|+||||.+++. ++|.++|++||+++|+|++|+.
T Consensus 184 ~~~~v~~~~~~--~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~l---~~i~~la~~~g~~vi~D~a~~~ 255 (465)
T 3e9k_A 184 EESMRMIKPRE--GEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFNI---PAITKAGQAKGCYVGFDLAHAV 255 (465)
T ss_dssp HHHEEEECCCT--TCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCCH---HHHHHHHHHTTCEEEEECTTTT
T ss_pred eeeeEEEecCC--CCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeecH---HHHHHHHHHcCCEEEEEhhhhc
Confidence 2 23433 56778999999999742 1378999999999999999985 5588899999999999999973
Q ss_pred cccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc---------------
Q 043923 236 TVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--------------- 300 (469)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~--------------- 300 (469)
+..+ ..+... +..++++|++|.++....++|+++++++.+.........
T Consensus 256 ---g~~~-~~~~~~------------~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 319 (465)
T 3e9k_A 256 ---GNVE-LYLHDW------------GVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNK 319 (465)
T ss_dssp ---TTSC-CCHHHH------------TCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSC
T ss_pred ---CCcC-Cchhhc------------CCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCC
Confidence 2221 222222 456888999999932233789998865443211000000
Q ss_pred -----------cccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh-----------cCCceecCC---
Q 043923 301 -----------FGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK-----------AGISCLKSN--- 355 (469)
Q Consensus 301 -----------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-----------~g~~v~~~~--- 355 (469)
.++.+.+...++.+++.... ...+++.++++.+.++++.+.|++ .|+++..+.
T Consensus 320 ~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~ 397 (465)
T 3e9k_A 320 LQLIPGVCGFRISNPPILLVCSLHASLEIFK--QATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVE 397 (465)
T ss_dssp CCBCSSGGGGCCSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGG
T ss_pred cCcCCChHHhccCCccHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHh
Confidence 01344444555444443211 112577788888888999999987 577777654
Q ss_pred -ceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 356 -AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF-AN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 356 -~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~-~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.|.++++.++. ... ++.+.|. ++||.+..+ .++++|+++ .. .+++++++++++|++++++.+
T Consensus 398 ~~g~~~~~~~~~--~~~------~l~~~L~-~~Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 398 ERGCQLTITFSV--PNK------DVFQELE-KRGVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp GBCSCEEEEECC--TTC------CHHHHHH-TTTEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred hcccEEEEEecC--CHH------HHHHHHH-HCCEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 36788888762 111 3555555 669998732 357999998 33 489999999999999998654
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 463 ~ 463 (465)
T 3e9k_A 463 T 463 (465)
T ss_dssp -
T ss_pred c
Confidence 4
No 181
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=8.3e-26 Score=232.31 Aligned_cols=360 Identities=13% Similarity=0.073 Sum_probs=224.9
Q ss_pred CCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccc-cCCCCCCcHHHHHHHHHHHHhHcCCCCCCC
Q 043923 36 NPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELA-LFQDYHGLPAFKKALVEFMSEIRGNKVTFD 110 (469)
Q Consensus 36 ~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~ 110 (469)
....+||++.| .+++. ++.+.+++.+.. .... .|....+..+++.++++.+.+..+ ..
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~~lae~l~~~~~----~~ 115 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQM-------------RELPYYNTFFKTTHVPAIALAQKLAELAP----GD 115 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCSCCCSSSSEECHHHHHHHHHHHHHSC----TT
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHH-------------HhccccccccccCCHHHHHHHHHHHHhCC----CC
Confidence 34568999887 66664 466776666531 1111 222223345666666666665543 45
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEccCCCcChHHHHhhhCCC-----------EEEEeeccC--C-
Q 043923 111 TSKIVLTAGATSANETLMFCLAE--------PGEAFLLPTPYYPGFDRDLKWRTGV-----------EIVPIQCTS--L- 168 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~--------~gd~Vl~~~P~y~~~~~~~~~~~g~-----------~~~~v~~~~--~- 168 (469)
.++|++++|+++|+..+++.+.. +++.|++.+|+|.++...+....|. .+..++.+. .
T Consensus 116 ~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~ 195 (472)
T 3hmu_A 116 LNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAE 195 (472)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccC
Confidence 68999999999999999998864 4689999999999886555433221 233444221 0
Q ss_pred CCcccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 169 NGFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 169 ~~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
+++ .| +++|++.+++.. ..++.+|++..++|++|.+. +.+.+++|.++|++||+++|+||+|.++...
T Consensus 196 ~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~ 272 (472)
T 3hmu_A 196 GGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRT 272 (472)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred Ccc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCccc
Confidence 111 23 677887776421 12556555554466777755 8899999999999999999999999985333
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh--c--ccccCcHHHHHHHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--S--SFGLVSSQTQYLLSAL 315 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~--~--~~~~~s~~~q~~~~~~ 315 (469)
+.. .. .+... ..+.++ +|||++|..|+|+||++++ +.+.+.+... . ..+..+++++.++.++
T Consensus 273 G~~-~a-~~~~~--------v~pdi~---t~sK~l~gg~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~a~aAa~aa 338 (472)
T 3hmu_A 273 GNW-FG-TQTMG--------IRPHIM---TIAKGLSSGYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPVAAAVALEN 338 (472)
T ss_dssp SSS-CH-HHHHT--------CCCSEE---EECGGGTTTSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHH
T ss_pred Ccc-ch-hHHhC--------CCCcee---eechhhhcCCcceEEEEEC-HHHHHhcccCCccccCCCCCCHHHHHHHHHH
Confidence 322 11 22211 223333 6899998455999999995 4455555311 1 1234678888888887
Q ss_pred hcCchhhHHHHHHHHHHHH-HHHHHHHHHHHhc---C-CceecCCceEEEEEecccccccC-C-----hhHHHHHHHHHH
Q 043923 316 LSDKKFTQNYISENKKRLK-QRHRKLVSGLEKA---G-ISCLKSNAGLFCWVDMRHLLRSN-T-----FEAEMELWKKIV 384 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~-~~~~~l~~~L~~~---g-~~v~~~~~g~~~~v~~~~~~~~~-~-----~~~~~~l~~~ll 384 (469)
|+..+. +...+.++ ++.+++.+.|+++ + +....+.+ .|+++.+....... . .....+++..++
T Consensus 339 L~~~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 412 (472)
T 3hmu_A 339 LRILEE-----ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVG-MMASIALTPNKASRAKFASEPGTIGYICRERCF 412 (472)
T ss_dssp HHHHHH-----TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEET-TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH
T ss_pred HHHHHH-----hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceEEEEEecCccccccccchhHHHHHHHHHHHH
Confidence 753211 12334444 5555666666544 2 33344444 57777765321110 0 112335566666
Q ss_pred HhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcccccccccccc
Q 043923 385 YDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTTLHNQSNHQS 443 (469)
Q Consensus 385 ~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~~~~~~~~~~ 443 (469)
++||.++|+. +++||++.. .+++++++++++|++++++..+...+|+--+|
T Consensus 413 -~~Gv~v~~~g-------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~~~~~~~~~ 464 (472)
T 3hmu_A 413 -ANNLIMRHVG-------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIEKQGLMKS 464 (472)
T ss_dssp -HTTBCCEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCB
T ss_pred -HCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 5699999862 689999654 49999999999999999887776666555444
No 182
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=1.4e-25 Score=230.93 Aligned_cols=351 Identities=11% Similarity=0.045 Sum_probs=227.2
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+ .+.+. ++.+.+++.+. +.....+....+..+++.++++++.+.++ ...+
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~-------------l~~~~~~~~~~~~~~~~~~la~~l~~~~~----~~~~ 115 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAHQ-------------AMVLPYASPWYMATSPAARLAEKIATLTP----GDLN 115 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHH-------------HHHCCCCCTTTCBCHHHHHHHHHHHTTSS----TTCC
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHH-------------HHhccCcccCccCCHHHHHHHHHHHhcCC----CCcC
Confidence 3468999877 66664 56677776653 12222222224567888999999887654 4567
Q ss_pred cEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCCcChHHHHhhhCC--------------CEEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFCLA--------EPGEAFLLPTPYYPGFDRDLKWRTG--------------VEIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~~g--------------~~~~~v~~~~~~~ 170 (469)
.|++++|+++|+..++..+. ..++.|++.+|+|.++...+....| ...++.|.....
T Consensus 116 ~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 194 (476)
T 3i5t_A 116 RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA- 194 (476)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-
Confidence 99999999999999999885 3367999999999987655433212 223333332111
Q ss_pred cccC--------HHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 171 FQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 171 ~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
+..+ +++|++.+++.. ..++++|+++.++|++|. +++.+.+++|.++|++||+++|+||+|.++...+.
T Consensus 195 ~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~ 272 (476)
T 3i5t_A 195 GNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE 272 (476)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred CCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC
Confidence 2223 678888776421 126677777766788885 88999999999999999999999999998543333
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh-------c--ccccCcHHHHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM-------S--SFGLVSSQTQYL 311 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~-------~--~~~~~s~~~q~~ 311 (469)
. ........ ..+.++ ++||++| .| +|+|+++++ +.+.+.+... . ..+..+++++.+
T Consensus 273 ~-~~~~~~~~--------v~pdi~---t~sK~l~-~G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aA 338 (476)
T 3i5t_A 273 W-FASEKVFG--------VVPDII---TFAKGVT-SGYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYSNQPVACAA 338 (476)
T ss_dssp S-CHHHHTTC--------CCCSEE---EECGGGG-TTSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHH
T ss_pred c-eeeecccC--------CCcchh---hhhhhhc-CCCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCCcCHHHHHH
Confidence 2 11110111 223333 6899998 69 999999994 4555544432 1 223467888888
Q ss_pred HHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC----CceecCCceEEEEEecccccccC-Chh----HHHHHHHH
Q 043923 312 LSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG----ISCLKSNAGLFCWVDMRHLLRSN-TFE----AEMELWKK 382 (469)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g----~~v~~~~~g~~~~v~~~~~~~~~-~~~----~~~~l~~~ 382 (469)
+.++|+...- +...+.++++.+++.+.|++++ +....+.+ .|+++++....... .+. ....++..
T Consensus 339 a~aaL~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (476)
T 3i5t_A 339 ALANIELMER-----EGIVDQAREMADYFAAALASLRDLPGVAETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDER 412 (476)
T ss_dssp HHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-ceeEEEEecCccccccccchhHHHHHHHHH
Confidence 8888753211 2334555566666777776542 23334444 57777776421111 000 13355666
Q ss_pred HHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcccc
Q 043923 383 IVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTTL 435 (469)
Q Consensus 383 ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~~ 435 (469)
++ ++||.++|. .+++||++.. .+++++++++++|++++++..++.
T Consensus 413 l~-~~Gv~v~~~-------g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 413 CF-ELGLIVRPL-------GDLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp HH-HTTEECEEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HH-HCCCEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 569999984 1689999654 499999999999999998877644
No 183
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.94 E-value=1.5e-25 Score=229.39 Aligned_cols=317 Identities=14% Similarity=0.071 Sum_probs=219.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc-----EEEeCChHHHHHHHHHHhcC--------CC-----CEEEEcc
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK-----IVLTAGATSANETLMFCLAE--------PG-----EAFLLPT 142 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~-----i~~t~G~~~al~~~~~~l~~--------~g-----d~Vl~~~ 142 (469)
.|....+..++++++.+++.+.+| ++.++ +++|+|+++++..++.++.. +| +.|+++.
T Consensus 72 ~~~~~~~~~~l~~~~~~~la~l~g----~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~ 147 (452)
T 2dgk_A 72 DKEEYPQSAAIDLRCVNMVADLWH----APAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP 147 (452)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT----CCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS
T ss_pred ChhhChhHHHHHHHHHHHHHHHhC----CCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC
Confidence 344555778889999888888776 44554 99999999999999888753 45 5899999
Q ss_pred CCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 143 PYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 143 P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
+|..+...+... |++++.+|+++ ++|.+|+++|+++|++ ++++|++++|+||||.+.+. ++|.++|++
T Consensus 148 -~h~~~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~l---~~I~~ia~~ 215 (452)
T 2dgk_A 148 -VQICWHKFARYW-DVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTGNYEFP---QPLHDALDK 215 (452)
T ss_dssp -CCHHHHHHHHHT-TCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTCBBCCH---HHHHHHHHH
T ss_pred -CcHHHHHHHHHc-CceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCcccCCH---HHHHHHHHH
Confidence 999888888877 99999999874 3688999999999865 78999999999999999874 457888888
Q ss_pred c------CeEEEEecccccccc--CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHH-HHH
Q 043923 223 K------NIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDM-VVA 293 (469)
Q Consensus 223 ~------~~~iI~Deay~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~-~~~ 293 (469)
+ |+++++|++|+.+.. -...... .+ . ..+..++..|++| |+++|.++||+++.++. +..
T Consensus 216 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~-~--------~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~ 283 (452)
T 2dgk_A 216 FQADTGIDIDMHIDAASGGFLAPFVAPDIVW--DF-R--------LPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQ 283 (452)
T ss_dssp HHHHHCCCCCEEEECTTGGGTHHHHCTTCCC--ST-T--------STTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCG
T ss_pred HhhccCCCCcEEEEcccHHHHHHhhCccchh--hc-C--------CCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHH
Confidence 5 999999999987532 1111110 01 0 1244566779999 55689999999996553 212
Q ss_pred HHHHhcccc-----------cC---cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----
Q 043923 294 AATKMSSFG-----------LV---SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS---- 354 (469)
Q Consensus 294 ~~~~~~~~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~---- 354 (469)
.+.....+. +. ..+.++++...+. .+.+++..+++.++++++.+.|+++ ++++..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 358 (452)
T 2dgk_A 284 ELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPD 358 (452)
T ss_dssp GGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTT
T ss_pred HhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCC
Confidence 221111110 11 2344555544442 2345677788888999999999988 4877643
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
....++.+.++..... . .+..++.+.|. +.||.+....... ..+.+++|++++. .++++++++++.|+++++..+
T Consensus 359 ~~~~~v~f~~~~~~~~-~-~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 359 EGIPAVCFKLKDGEDP-G-YTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp TBSSEEEEEECTTCCC-S-CCHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCcccc-c-CCHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3345666776532100 0 01135666665 5699765322111 1135689999986 478999999999999988776
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 436 ~ 436 (452)
T 2dgk_A 436 D 436 (452)
T ss_dssp H
T ss_pred h
Confidence 5
No 184
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=3.9e-25 Score=220.15 Aligned_cols=291 Identities=13% Similarity=0.086 Sum_probs=204.1
Q ss_pred CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEccCCCcChHHHHhhhCCCEE
Q 043923 84 DYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---AEPGEAFLLPTPYYPGFDRDLKWRTGVEI 160 (469)
Q Consensus 84 ~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~ 160 (469)
+.....++++++|++++ . +++++|+|+++|+..++.++ +++||.|+++.|+|..+...+... |+++
T Consensus 30 ~~~~~~~l~~~la~~~~--------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~ 98 (375)
T 2fnu_A 30 QGKRSLLFEEALCEFLG--------V--KHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLES-GYTP 98 (375)
T ss_dssp SSHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHT-TCEE
T ss_pred CChHHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHC-CCEE
Confidence 34467899999999985 2 38999999999999999999 889999999999999999888877 9999
Q ss_pred EEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCC
Q 043923 161 VPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 161 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~ 240 (469)
+.+++++++ .+|++++++++++ ++++|++++| ||.+.+ +++|.++|++||+++|+||+|+......
T Consensus 99 ~~~~~~~~~--~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~ 164 (375)
T 2fnu_A 99 VFAGIKNDG--NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQ 164 (375)
T ss_dssp EECCBCTTS--SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred EEeccCCCC--CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeEC
Confidence 999987533 6889999887754 7888888876 999988 5568889999999999999998432211
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCc--cccCCCcceEEEEEe-cCHHHHHHHHHhccc---------------c
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLS--KDLGLPGFRVGAIYS-NDDMVVAAATKMSSF---------------G 302 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~GlRiG~li~-~~~~~~~~~~~~~~~---------------~ 302 (469)
. .. + . ..+ .+++.|+| |++|. | +|++++ +++.+.+.+...... +
T Consensus 165 ~--~~---~-~--------~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (375)
T 2fnu_A 165 N--KK---V-G--------GFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIG 226 (375)
T ss_dssp T--EE---T-T--------SSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCC
T ss_pred C--ee---c-c--------ccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCcccccccccccccc
Confidence 1 01 1 1 112 36677888 99974 6 678877 445555444433211 1
Q ss_pred ---cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----C-ceEEEEEecccccccCCh
Q 043923 303 ---LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS----N-AGLFCWVDMRHLLRSNTF 373 (469)
Q Consensus 303 ---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~----~-~g~~~~v~~~~~~~~~~~ 373 (469)
..+.+...++...+ . ++++..++++++++++.+.|+++ |+++.++ . .++++|+.++... .
T Consensus 227 ~~~~~~~~~~a~~~~~~---~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 295 (375)
T 2fnu_A 227 HNFRLNEIQSALGLSQL---K----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF----F 295 (375)
T ss_dssp CBCCCCHHHHHHHHHHH---T----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG----G
T ss_pred ccCCCCHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc----c
Confidence 12232222222111 1 24566777788889999999987 7776654 1 2345577776310 0
Q ss_pred hHHHHHHHHHHHhCCeEEeCCCCCCCC---------------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 374 EAEMELWKKIVYDVKLNISPGSSCHCT---------------------EPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 374 ~~~~~l~~~ll~~~GI~v~pg~~f~~~---------------------~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+..++.+.|. ++||.++.+ |.+. ..+++||+++. .+++++++++++|++++++.
T Consensus 296 ~~~~~l~~~L~-~~gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 296 TCKKLILESLH-KRGILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp GGHHHHHHHHH-HTTEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-HCCCCcccc--ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 02335666664 679999832 2110 12689999986 48999999999999998764
No 185
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=6.9e-26 Score=228.00 Aligned_cols=323 Identities=11% Similarity=0.054 Sum_probs=206.7
Q ss_pred CCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCC-CCcHHHHHHHHHHHHhHcCCCCCCC-CCcEE
Q 043923 38 TGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDY-HGLPAFKKALVEFMSEIRGNKVTFD-TSKIV 115 (469)
Q Consensus 38 ~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~Lr~aia~~l~~~~~~~~~~~-~~~i~ 115 (469)
+++++++.+..+.++ .+.+++.+.... . ......|+.. ....++++.++++++ ++ +++|+
T Consensus 39 ~~~~~~~~~~~~~~~-~v~~a~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~~i~ 100 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRL-EQLQTLTTTAAA-L--------FGTSHRQAPVKNLVGRVRSGLAELFS--------LPDGYEVI 100 (398)
T ss_dssp CSSCBCCSSSCCCCH-HHHHGGGTTTTT-T--------TTSCTTSHHHHHHHHHHHHHHHHHTT--------CCTTCEEE
T ss_pred cCCccccCCCCCCCH-HHHHHHhhcCCC-c--------cCcCcCCHHHHHHHHHHHHHHHHHhC--------CCCCceEE
Confidence 356788876655444 455555442100 0 0101223211 123455666666554 44 46899
Q ss_pred E-eCChHHHHHHHHHHhcCCCCEEEEccCCCcCh-HHHHhhh-CCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 116 L-TAGATSANETLMFCLAEPGEAFLLPTPYYPGF-DRDLKWR-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 116 ~-t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
+ |+|+++++.+++.+++++| .+.+..+.|... ...+... .|.+++.++.+ .++..+.+ ++ +++
T Consensus 101 ~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~~-----i~------~~~ 166 (398)
T 2fyf_A 101 LGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEPQ-----TD------PSV 166 (398)
T ss_dssp EEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCCC-----CC------TTC
T ss_pred EeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCcc-----cc------CCC
Confidence 8 9999999999999998887 223333333211 1122221 16788888876 33434321 22 378
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCcc
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSK 272 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK 272 (469)
++|++++|+||||.+++.+++.++ +|+++|+||+|+.+ ..+ .. + . +..+++.|+||
T Consensus 167 ~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~---~~~-~~---~-~----------~~di~~~s~sK 222 (398)
T 2fyf_A 167 DVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAG---GLP-VD---I-A----------ETDAYYFAPQK 222 (398)
T ss_dssp SEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTT---TSC-CC---G-G----------GCSEEEECTTS
T ss_pred CEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccC---Ccc-cC---c-c----------cCcEEEEecCc
Confidence 999999999999999998886654 89999999999842 111 11 1 1 23477889999
Q ss_pred ccCCCcceEEEEEecCHHHHHHHHHh-----------------------cccccCcHHHHHHHHHHhcCchhhHHH--HH
Q 043923 273 DLGLPGFRVGAIYSNDDMVVAAATKM-----------------------SSFGLVSSQTQYLLSALLSDKKFTQNY--IS 327 (469)
Q Consensus 273 ~~g~~GlRiG~li~~~~~~~~~~~~~-----------------------~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~ 327 (469)
++|.+| ++||++++++.+.. +... ..+++.+...+.++.++++.. .+. ++
T Consensus 223 ~~~~~g-g~g~l~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~---~~~g~~~ 297 (398)
T 2fyf_A 223 NFASDG-GLWLAIMSPAALSR-IEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWL---VGNGGLD 297 (398)
T ss_dssp TTCSCS-SEEEEEECHHHHHH-HHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHHTSHH
T ss_pred ccCCCC-ceEEEEECHHHHHH-hhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HHccCHH
Confidence 999775 69999996554432 2110 122345666666666666431 222 67
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCceec--C--CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCC
Q 043923 328 ENKKRLKQRHRKLVSGLEKA-GISCLK--S--NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEP 402 (469)
Q Consensus 328 ~~~~~l~~~~~~l~~~L~~~-g~~v~~--~--~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~ 402 (469)
+.+++++++++++.+.|+++ |+++.. + .+++++|+.++... +..++.+.|.++ ||.+++|. ...+.
T Consensus 298 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~-gI~v~~g~--~~~~~ 368 (398)
T 2fyf_A 298 WAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------DAGTVAKILRAN-GIVDTEPY--RKLGR 368 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS------CHHHHHHHHHHT-TCBCCSCC--TTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC------CHHHHHHHHHHC-CcEEecCc--ccCCC
Confidence 77888899999999999988 787763 3 34558999986421 223566776654 99999873 22235
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 403 GWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 403 ~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
+++||+++. .+++++++++++|++++++
T Consensus 369 ~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 369 NQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp SEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 799999985 4899999999999998764
No 186
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=5.2e-25 Score=220.99 Aligned_cols=279 Identities=15% Similarity=0.176 Sum_probs=195.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~ 162 (469)
...+|++++|++++ . +++++++++++|+..++.+++++||.|+++.|+|.++... +... |++++.
T Consensus 60 ~~~~l~~~la~~~g--------~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g~~~~~ 128 (389)
T 3acz_A 60 TVEQFEEMVCSIEG--------A--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRF-GIEVDL 128 (389)
T ss_dssp HHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CCEEEE
Confidence 46789999999985 2 2566667778999999999999999999999999987665 3555 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.. |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+. .
T Consensus 129 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~-~- 190 (389)
T 3acz_A 129 IDTS-------DVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL-K- 190 (389)
T ss_dssp ECTT-------CHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-C-
T ss_pred ECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc-C-
Confidence 9852 78889888764 7899999999999999998 566888999999999999999865321 1
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcc-cc-cCcHHHHHHHHHHhcCc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSS-FG-LVSSQTQYLLSALLSDK 319 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~ 319 (469)
+ . ..+.++++.|+||.+|.+|.|+ ||+++++..+.+.+..... ++ ..++..+.++.+.++..
T Consensus 191 --~-~------------~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l 255 (389)
T 3acz_A 191 --P-L------------ELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTL 255 (389)
T ss_dssp --G-G------------GTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH
T ss_pred --c-c------------ccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHH
Confidence 1 1 1256788999999999999998 9999977244444433322 22 34566666666666542
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------Cceec---CCceEEEEEecccccccCChhHHHHHHH
Q 043923 320 KFTQNYISENKKRLKQRHRKLVSGLEKAG---------------ISCLK---SNAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---------------~~v~~---~~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
..+.++..++.+.+.+.|++++ +++.. ...|.++.+.+++ . +...
T Consensus 256 -------~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~-------~~~~ 318 (389)
T 3acz_A 256 -------PIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---F-------EAAK 318 (389)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---H-------HHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---H-------HHHH
Confidence 2233444455566666676642 11111 1123466677753 0 2345
Q ss_pred HHHHhCCeEEeC---C------CCCCC---------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 382 KIVYDVKLNISP---G------SSCHC---------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 382 ~ll~~~GI~v~p---g------~~f~~---------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
.++.+.||.+++ | ..+.. ..++++|+|++. ++++.+++.|.++++
T Consensus 319 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 319 KLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp HHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred HHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 667778998877 3 22211 125799999985 467788888888775
No 187
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=9.9e-25 Score=221.79 Aligned_cols=283 Identities=14% Similarity=0.157 Sum_probs=196.7
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~ 162 (469)
...+|++.+|++++ . .+.|++++|+ +|+..++.+++++||.|+++.|.|.++... +... |++++.
T Consensus 115 ~~~~l~~~lA~l~g--------~-~~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~v~~ 183 (445)
T 1qgn_A 115 TTVVLEEKISALEG--------A-ESTLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKM-GITATV 183 (445)
T ss_dssp HHHHHHHHHHHHHT--------C-SEEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGG-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-CCEEEE
Confidence 35689999999885 2 2556666665 999999999999999999999999987663 4455 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCce-eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKV-KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~-~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
++.+ |++++++++++ ++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..++. .
T Consensus 184 v~~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~-~ 246 (445)
T 1qgn_A 184 IDPA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ-K 246 (445)
T ss_dssp ECSS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C
T ss_pred eCCC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C
Confidence 8853 78999999986 67 99999999999999998 556888999999999999999854221 1
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh-ccccc-CcHHHHHHHHHHhcC
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM-SSFGL-VSSQTQYLLSALLSD 318 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~-~~~~~-~s~~~q~~~~~~l~~ 318 (469)
. . ..+..++++|+||.+|..| +++||+++++. +.+.+... ..++. .+++..+++.+.++.
T Consensus 247 ---~-~------------~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~ 309 (445)
T 1qgn_A 247 ---A-L------------ALGADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRNLHHILGGALNPNAAYLIIRGMKT 309 (445)
T ss_dssp ---T-T------------TTTCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHGGG
T ss_pred ---c-c------------ccCCEEEEECCcccccccccceEEEEEECHH-HHHHHHHHHHHhCCCCCHHHHHHHHHhHHH
Confidence 1 1 1245688999999998554 47999999654 43333332 22332 345544444444432
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ceecC----------------CceEEEEEecccccccCChhHHHHHH
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKA-GI-SCLKS----------------NAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~-~v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
+..+.+++.++.+.+.+.|+++ ++ .+..| ..|.++++.+++.. .+...++
T Consensus 310 -------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~-----~~~~~~l 377 (445)
T 1qgn_A 310 -------LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL-----LTTAKFV 377 (445)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH-----HHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH-----HHHHHHH
Confidence 2334455566678888889877 44 34332 13567788887410 1122233
Q ss_pred HHHHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 381 KKIVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
.. ++..++.+..|..+.. ..++.||||++ .|+++.+++.|+++++.
T Consensus 378 ~~-l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG---~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 378 DA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG---VEDFDDLKADILQALDS 444 (445)
T ss_dssp HH-CSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC---SSCHHHHHHHHHHHHHH
T ss_pred Hh-CCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 32 3334787777765421 12479999998 36799999999998864
No 188
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=3.4e-24 Score=216.75 Aligned_cols=284 Identities=19% Similarity=0.231 Sum_probs=194.6
Q ss_pred cCCCC--CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hh
Q 043923 81 LFQDY--HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KW 154 (469)
Q Consensus 81 ~Y~~~--~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~ 154 (469)
.|+.. ....++++.++++++ .+++++++|+++|+..++.+++++||.|+++.|.|..+...+ ..
T Consensus 49 ~y~~~~~~~~~~l~~~la~~~g----------~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~ 118 (412)
T 2cb1_A 49 VYARQKDPTAKALEERLKALEG----------ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSL 118 (412)
T ss_dssp SBTTTCCHHHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTT
T ss_pred CcCCCCChHHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHH
Confidence 45533 357888888988885 348999999999999999999999999999999998765543 33
Q ss_pred hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 155 RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 155 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
. |++++.++. |++++++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+||+|+
T Consensus 119 ~-g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 119 M-GVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp T-TCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred c-CCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 5 999998874 36888887754 7899999999999999997 6668999999999999999998
Q ss_pred ccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecC-H------------------------
Q 043923 235 GTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSND-D------------------------ 289 (469)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~-~------------------------ 289 (469)
.+.+... . . ..+.++++.|+||.++.+|.|+|++++.+ .
T Consensus 181 ~~~~~~~---~---~----------~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (412)
T 2cb1_A 181 AAGALCR---P---L----------AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALR 244 (412)
T ss_dssp TTTTSCC---G---G----------GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHG
T ss_pred cccccCC---c---c----------ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccc
Confidence 5311111 1 1 12567889999999988999999988654 2
Q ss_pred --HHHHHHHHh--cccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee-cC--------
Q 043923 290 --MVVAAATKM--SSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL-KS-------- 354 (469)
Q Consensus 290 --~~~~~~~~~--~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~-------- 354 (469)
.+.+.++.. ..++ ..++...+++...++. +....++..+..+++.+.|.+. ++.+. .|
T Consensus 245 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~ 317 (412)
T 2cb1_A 245 ARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAH 317 (412)
T ss_dssp GGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTH
T ss_pred hHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccH
Confidence 222222222 1122 1234443333333322 2333444556778888888876 67633 22
Q ss_pred --------CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCC---------CCCC---------------CCC
Q 043923 355 --------NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGS---------SCHC---------------TEP 402 (469)
Q Consensus 355 --------~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~---------~f~~---------------~~~ 402 (469)
..+.++.+.+ + .. +.+...+.+.||.+ .++ .+.. ..+
T Consensus 318 ~~~~~~~~~~~~iv~~~~-~--~~-------~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~ 386 (412)
T 2cb1_A 318 RNARKYLASGGPILTLDL-G--DL-------ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP 386 (412)
T ss_dssp HHHHHHCSSSCSEEEEEC-S--SH-------HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred HHHHHhCCCCceEEEEEe-C--CH-------HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence 2345666777 3 11 23455666789998 774 2210 015
Q ss_pred CeEEEEeecC-CHHHHHHHHHHHHH
Q 043923 403 GWFRVCFANM-SEDTLKLSMQRLKA 426 (469)
Q Consensus 403 ~~iRi~~~~~-~~e~i~~~l~~L~~ 426 (469)
+.+|+|++.. ++++++.++++|++
T Consensus 387 ~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 387 GLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CeEEEEeccCCHHHHHHHHHHHHhh
Confidence 7999999863 56677776666653
No 189
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=5.5e-25 Score=221.08 Aligned_cols=282 Identities=15% Similarity=0.135 Sum_probs=188.6
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~ 162 (469)
...+|++++|++++ .+ ++++++++++|+..++. ++++||.|+++.|.|.+... .++.. |++++.
T Consensus 56 ~~~~lr~~la~~~g--------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~v~~ 123 (393)
T 1n8p_A 56 NRENLERAVAALEN--------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAH-GVETSF 123 (393)
T ss_dssp HHHHHHHHHHHHTT--------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTT-CSCCEE
T ss_pred hHHHHHHHHHHHhC--------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHc-CcEEEE
Confidence 56899999999985 22 45555556999999999 88999999999999985544 34445 999998
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc----CeEEEEecccccccc
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK----NIHLISDEIYSGTVF 238 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~----~~~iI~Deay~~~~~ 238 (469)
+|.+ | +++++++++ ++++|++++|+||||.+++ +++|.++|+++ |+++|+||+|+.+.+
T Consensus 124 v~~~-------d-~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp ESSH-------H-HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred eCCC-------h-HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 8864 5 777777653 7899999999999999998 56688899999 999999999987644
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHHHHHHHHhcc-cc-cCcHHHHHHHHHH
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMVVAAATKMSS-FG-LVSSQTQYLLSAL 315 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~ 315 (469)
. ....+ +.++++.|+||.+|.+|+|+ ||++++++.+.+.+..... ++ ..++..+.++...
T Consensus 187 ~-----~~~~~------------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 249 (393)
T 1n8p_A 187 S-----NPLNF------------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRG 249 (393)
T ss_dssp C-----CGGGG------------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred C-----CHHHc------------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 2 11112 46788999999999899999 9999854555444433322 22 2455555555555
Q ss_pred hcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC--Cc-eecC---------------C--c-eEEEEEecccccccCChh
Q 043923 316 LSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG--IS-CLKS---------------N--A-GLFCWVDMRHLLRSNTFE 374 (469)
Q Consensus 316 l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g--~~-v~~~---------------~--~-g~~~~v~~~~~~~~~~~~ 374 (469)
+.. +..+.++..++.+.+.+.|++.. +. +..+ . . |.++++.+++. ..
T Consensus 250 l~~-------~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-----~~ 317 (393)
T 1n8p_A 250 LKT-------LHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-----AE 317 (393)
T ss_dssp HTT-------HHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-----HH
T ss_pred cch-------HHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-----HH
Confidence 543 23444555666677777777653 22 2111 1 2 56788888641 01
Q ss_pred HHHHHHHHHHHhCCeEEeCCC----------CCC-----------CCCCCeEEEEeecC-CHHHHHHHHHHHHHH
Q 043923 375 AEMELWKKIVYDVKLNISPGS----------SCH-----------CTEPGWFRVCFANM-SEDTLKLSMQRLKAF 427 (469)
Q Consensus 375 ~~~~l~~~ll~~~GI~v~pg~----------~f~-----------~~~~~~iRi~~~~~-~~e~i~~~l~~L~~~ 427 (469)
+...++.. ++..++.+..|+ .+. ...++.+|+|++.. ++++++.+.++|+++
T Consensus 318 ~~~~~l~~-l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 318 AASKFASS-TRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHHHHHH-CSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhh-CCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 22223332 233355544342 221 01247899999863 566666666666654
No 190
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=6.1e-25 Score=224.95 Aligned_cols=332 Identities=11% Similarity=0.042 Sum_probs=203.6
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++ +++.+.+++.+... ....| .+..++++++++++.+.++ .++
T Consensus 56 g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~-------------~~~~~---~~~~~~~~~la~~l~~~~~-----~~~ 114 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGHGHPRVNAAIAEALS-------------HGVQY---AASHPLEVRWAERIVAAFP-----SIR 114 (453)
T ss_dssp CCEEEESCTTTTSCTTCBTCHHHHHHHHHHHT-------------TTCSS---CSSCHHHHHHHHHHHHHCT-----TCS
T ss_pred CCEEEECcccHhhcccCCCCHHHHHHHHHHHH-------------hCCCC---CCCCHHHHHHHHHHHhhCC-----CCC
Confidence 34689998885 434 45667777665311 11122 2357899999999987743 578
Q ss_pred cEEEeCChHHHHHHHHHH---hcCCCCEEEEccCCCcChHHHHhhh----------CCCE------EEEeeccCCCCccc
Q 043923 113 KIVLTAGATSANETLMFC---LAEPGEAFLLPTPYYPGFDRDLKWR----------TGVE------IVPIQCTSLNGFQI 173 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~---l~~~gd~Vl~~~P~y~~~~~~~~~~----------~g~~------~~~v~~~~~~~~~~ 173 (469)
+|++++|+++|+..++++ +.++ +.|++.+|+|+++...+... .|+. ++.++. .
T Consensus 115 ~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~ 186 (453)
T 2cy8_A 115 KLRFTGSGTETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------D 186 (453)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------T
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------C
Confidence 999999999999999988 6554 67888889998765433211 0221 223332 3
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
|++++++++++. ++++++ ++++| +||||.++ +.+++++|.++|++||++||+||+|.++ ..+.. .. .+...
T Consensus 187 d~~~le~~l~~~---~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~-~~~~~ 259 (453)
T 2cy8_A 187 DIEGMREVFANH---GSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GM-QALLD 259 (453)
T ss_dssp CHHHHHHHHHHH---GGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HH-HHHHT
T ss_pred CHHHHHHHHHhc---CCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hh-hHHhC
Confidence 789999988742 125665 55666 46799764 7999999999999999999999999975 33321 11 11111
Q ss_pred ccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-------hcccccCcHHHHHHHHHHhcC-chhhH
Q 043923 252 DRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-------MSSFGLVSSQTQYLLSALLSD-KKFTQ 323 (469)
Q Consensus 252 ~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~-~~~~~ 323 (469)
....+ .|+||++| +|+|+||+++++ .+.+.+.. ....+..+++++.++.++|+. . .
T Consensus 260 --------~~~di---~s~sK~l~-~G~~~G~v~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~-- 323 (453)
T 2cy8_A 260 --------VQPDL---TCLAKASA-GGLPGGILGGRE-DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E-- 323 (453)
T ss_dssp --------CCCSE---EEEEGGGG-TTSSCEEEEECH-HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H--
T ss_pred --------CCCcE---EEEChhhh-CCcceEEEechH-HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h--
Confidence 11222 38999998 699999999964 44333322 111234677888777776654 2 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCceEEEEEeccc-----c-----ccc---CChhHHHHHHHHHHHh
Q 043923 324 NYISENKKRLKQRHRKLVSGLEK----AGISCLKSNAGLFCWVDMRH-----L-----LRS---NTFEAEMELWKKIVYD 386 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~g~~~~v~~~~-----~-----~~~---~~~~~~~~l~~~ll~~ 386 (469)
+...++++++++++.+.|++ +++....+..|.|+|+.++. . ... .......+++..++ +
T Consensus 324 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~ 399 (453)
T 2cy8_A 324 ---DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-L 399 (453)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-H
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-H
Confidence 12233444455555555544 35533223345788998874 1 000 01122345677776 5
Q ss_pred CCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 387 VKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 387 ~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
+||.+.|+ +.+|+++. .+++++++++++|++++++..+
T Consensus 400 ~Gv~v~~~--------~~~~l~~~-~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 400 EGVDIGGR--------GSVFLSAQ-HEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp TTEECBTT--------TEEECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEeCC--------CCEEeecc-CCHHHHHHHHHHHHHHHHHHHh
Confidence 69999653 23777644 5999999999999999987644
No 191
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=5.3e-25 Score=224.11 Aligned_cols=333 Identities=15% Similarity=0.116 Sum_probs=207.5
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||++.+. +++ +++.+.+++.+.. .....|. +..++++++++.+.+.++ .++
T Consensus 55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~-------------~~~~~~~---~~~~~~~~l~~~la~~~~-----~~~ 113 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGHKHPRVLEAVEEAL-------------ARGWLYG---APGEAEVLLAEKILGYVK-----RGG 113 (434)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------HTCSCCS---SCCHHHHHHHHHHHHHHC-----TTC
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHH-------------HhCCCCC---CCCHHHHHHHHHHHHhCC-----CCC
Confidence 34689998876 444 3566766666531 1111121 123444445555544432 468
Q ss_pred cEEEeCChHHHHHHHHHH---hcCCCCEEEEccCCCcChHHHHhh-------------hCCC------EEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFC---LAEPGEAFLLPTPYYPGFDRDLKW-------------RTGV------EIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~---l~~~gd~Vl~~~P~y~~~~~~~~~-------------~~g~------~~~~v~~~~~~~ 170 (469)
+|++++|+++|+..++++ +. +++.|++.+|+|+++...+.. ..|+ +++.+|.
T Consensus 114 ~v~~~~sgseA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~----- 187 (434)
T 2epj_A 114 MIRFVNSGTEATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY----- 187 (434)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----
Confidence 999999999999999987 54 456788889999875443211 0132 2455553
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
.|++++++++++. +.++++ |+++| +||||.++ +.+.+++|.++|++||+++|+||+|.++ ..+.. ...+
T Consensus 188 --~d~~~le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~--~~~~ 258 (434)
T 2epj_A 188 --NDVEALERVFAEY---GDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE--GAQG 258 (434)
T ss_dssp --TCHHHHHHHHHHH---GGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT--HHHH
T ss_pred --CCHHHHHHHHHhC---CCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc--hhhH
Confidence 2789999988752 125555 55566 56799876 7999999999999999999999999975 22221 1111
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----cccccCcHHHHHHHHHHhcCchhhH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----SSFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
... .... +.||||++| +|+|+||+++++ .+.+.+... ...+..+++++.++.++|+...
T Consensus 259 ~~~--------~~~d---i~s~sK~l~-~G~~~G~v~~~~-~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~--- 322 (434)
T 2epj_A 259 YFN--------IEGD---IIVLGKIIG-GGFPVGAVAGSR-EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALE--- 322 (434)
T ss_dssp HHT--------CCCS---EEEEEGGGG-TTSSCEEEEECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHH---
T ss_pred HhC--------CCCC---eeeecchhc-CCcceeeeeecH-HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHH---
Confidence 211 1122 248999999 599999999964 444433321 1122367778877777765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccc-ccc------CChhHHHHHHHHHHHhCCeEEe
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHL-LRS------NTFEAEMELWKKIVYDVKLNIS 392 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~-~~~------~~~~~~~~l~~~ll~~~GI~v~ 392 (469)
+ +...++++++++++.+.|+++ ++....+..|.|+|+.++.. ... .......+++..++ ++||.+.
T Consensus 323 ~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~ 399 (434)
T 2epj_A 323 E--EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIA 399 (434)
T ss_dssp H--SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECC
T ss_pred h--cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEe
Confidence 1 223445555566666666553 55432223457888988641 000 01122345666666 5699999
Q ss_pred CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 043923 393 PGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 393 pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~ 431 (469)
||.. ..+|+++. .+++++++++++|++++++.
T Consensus 400 ~~~~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 400 PSNL------EAVFTGLP-HQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp SSTT------SCEECCTT-CSHHHHHHHHHHHHHHHHHH
T ss_pred ccCC------CcEEEecc-CCHHHHHHHHHHHHHHHHHH
Confidence 8742 24677654 59999999999999998765
No 192
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.93 E-value=9e-25 Score=221.74 Aligned_cols=329 Identities=14% Similarity=0.105 Sum_probs=208.7
Q ss_pred CCCeeeeeccc--ccc--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAE--NQL--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+|||+.+. +++ +++.+.+++.+.. .....|. +..++++++++.+.+.++ .++
T Consensus 51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~---~~~~~~~~l~~~l~~~~~-----~~~ 109 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGHAHPKVLARVRETL-------------ERGLTFG---APSPLEVALAKKVKRAYP-----FVD 109 (424)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------HTCSCCS---SCCHHHHHHHHHHHHHCT-----TCC
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHH-------------HhCCCCC---CCCHHHHHHHHHHHHhCC-----CCC
Confidence 34579998876 554 3566777766531 1111222 224566666666665532 478
Q ss_pred cEEEeCChHHHHHHHHHH---hcCCCCEEEEccCCCcChHHHHhhh-------------CCC------EEEEeeccCCCC
Q 043923 113 KIVLTAGATSANETLMFC---LAEPGEAFLLPTPYYPGFDRDLKWR-------------TGV------EIVPIQCTSLNG 170 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~---l~~~gd~Vl~~~P~y~~~~~~~~~~-------------~g~------~~~~v~~~~~~~ 170 (469)
+|++++|+++|+..+++. +.+ ++.|++.+|+|+++...+... .|+ +++.+|.
T Consensus 110 ~v~~~~~g~ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~----- 183 (424)
T 2e7u_A 110 LVRFVNSGTEATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY----- 183 (424)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----
Confidence 999999999999999886 544 577899999998865432210 132 3444443
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCC-CCCCC-CHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNP-LGTTM-SRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NP-tG~~~-s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
.|++++++++++. +.+++ +++++|+|+ ||.++ +.+.+++|.++ ++||+++|+||+|.++ ..+.. ...+
T Consensus 184 --~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~--~~~~ 253 (424)
T 2e7u_A 184 --NDPEGLREVLKRR---GEEIA-AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG--GATE 253 (424)
T ss_dssp --TCHHHHHHHHHHH---GGGEE-EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT--HHHH
T ss_pred --CCHHHHHHHHHhC---CCCEE-EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh--HHHH
Confidence 2789999988742 11454 566778765 89765 79999999999 9999999999999975 32221 1112
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-h----cccccCcHHHHHHHHHHhcCchhhH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-M----SSFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-~----~~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
... ...++ .|+||++| +|+|+||+++++ .+.+.+.. . ...+..+++++.++.++|+.. .
T Consensus 254 ~~~--------~~~di---~s~sK~l~-~G~~~G~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~ 317 (424)
T 2e7u_A 254 LLG--------LKPDL---VTLGKILG-GGLPAAAYAGRR-EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---E 317 (424)
T ss_dssp HHT--------CCCSE---EEECGGGG-TTSSCEEEEECH-HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---H
T ss_pred HhC--------CCcch---hhhhhhhh-CCcceEEEEEcH-HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---H
Confidence 211 11232 39999999 699999999965 44443333 1 112246778888877777532 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCce-ecCCceEEEEEeccccc-c------cCChhHHHHHHHHHHHhCCeEE
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKA----GISC-LKSNAGLFCWVDMRHLL-R------SNTFEAEMELWKKIVYDVKLNI 391 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~----g~~v-~~~~~g~~~~v~~~~~~-~------~~~~~~~~~l~~~ll~~~GI~v 391 (469)
+ .++..++++++++++.+.|+++ ++.. .++. |.|+|++++... . ........+++..++ ++||.+
T Consensus 318 ~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v 394 (424)
T 2e7u_A 318 E-NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYW 394 (424)
T ss_dssp H-CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEEC
T ss_pred h-ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEE
Confidence 1 1334555566666666666553 5532 3343 468899986410 0 001122345666666 679999
Q ss_pred eCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 043923 392 SPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 392 ~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l 428 (469)
.||.. ..+|+++. .+++++++++++|++++
T Consensus 395 ~~~~~------~~~~~~~~-~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 395 PPSNF------EAAFLSVA-HREEDVEKTLEALRKAL 424 (424)
T ss_dssp CSSSS------SCEECCTT-CCHHHHHHHHHHHHHHC
T ss_pred eccCC------CceEeecc-CCHHHHHHHHHHHHHhC
Confidence 98752 24777754 59999999999998763
No 193
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.93 E-value=1.2e-24 Score=221.28 Aligned_cols=338 Identities=11% Similarity=0.041 Sum_probs=200.0
Q ss_pred CCCCeeeeeccc--cccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 36 NPTGIIQMGLAE--NQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 36 ~~~~~i~L~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
....+||++.+. +++. ++.+.+++.+.... .....|+ .....+|.+.+++++ + .+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~-----------~~~~~~~-~~~~~~la~~l~~~~----~-----~~ 109 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVER-----------GLSFGAP-TEMEVKMAQLVTDLV----P-----TM 109 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT-----------CSCCSSC-CHHHHHHHHHHHHHS----T-----TC
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHh-----------CcccCCC-CHHHHHHHHHHHhhC----C-----CC
Confidence 345689998875 4443 46666666653111 0011232 222344555555443 2 47
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCCC-------------------EEEEeeccCCCC
Q 043923 112 SKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTGV-------------------EIVPIQCTSLNG 170 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g~-------------------~~~~v~~~~~~~ 170 (469)
++|++++|+++|+..+++... .+++.|++..+.|+++...+....+. .+..++.
T Consensus 110 ~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 184 (429)
T 4e77_A 110 DMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY----- 184 (429)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-----
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-----
Confidence 899999999999999998543 35678999999998765422111011 1122221
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC--CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT--MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIME 248 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~--~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~ 248 (469)
.|++++++++++. +.+++ +|+++|+||+|-+ .+.+.+++|.++|++||+++|+||+|.++ ..+.. ...+
T Consensus 185 --~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~--~~~~ 255 (429)
T 4e77_A 185 --NDLASVRQAFEQY---PQEVA-CIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA--GAQD 255 (429)
T ss_dssp --TCHHHHHHHHHHS---TTTEE-EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT--CHHH
T ss_pred --CCHHHHHHHHHhc---CCCEE-EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc--hHHH
Confidence 1789999888742 12444 5667887765533 34556999999999999999999999975 33221 1122
Q ss_pred hhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH-----hcccccCcHHHHHHHHHHhcCchhhH
Q 043923 249 ILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-----MSSFGLVSSQTQYLLSALLSDKKFTQ 323 (469)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~ 323 (469)
... ....+ .|+||++| +|+|+||++++ +.+.+.+.. ....+..+++++.++.++|+.... .
T Consensus 256 ~~~--------~~pdi---~t~sK~~~-~G~~~G~~~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 321 (429)
T 4e77_A 256 YYH--------VIPDL---TCLGKIIG-GGMPVGAFGGR-REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-V 321 (429)
T ss_dssp HTT--------CCCSE---EEEEGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-T
T ss_pred hcC--------CCCCe---eeeccccc-CCCCeEEEEEC-HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-c
Confidence 211 11222 38999999 89999999995 444443332 112234678888887777652211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccC--------ChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 324 NYISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSN--------TFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 324 ~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~--------~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
+.+++.++.....++.|.+.+.++++....+..|+|+|+.++...... ......+++..++ ++||.+.|+.
T Consensus 322 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~ 400 (429)
T 4e77_A 322 GVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA 400 (429)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC
Confidence 123333333333334444444555655444455688999987531100 1122245666666 5599999874
Q ss_pred CCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 043923 396 SCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 396 ~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~ 430 (469)
. ..+|+++. .+++++++++++|++++++
T Consensus 401 ~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 401 F------EAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp T------SCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred C------CCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 2 34666644 5999999999999999864
No 194
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.93 E-value=1.3e-24 Score=225.21 Aligned_cols=317 Identities=11% Similarity=0.055 Sum_probs=218.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEE---EeCChHHHHHHHHHHhcCC--------CC-----EEEEccCCC
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIV---LTAGATSANETLMFCLAEP--------GE-----AFLLPTPYY 145 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~---~t~G~~~al~~~~~~l~~~--------gd-----~Vl~~~P~y 145 (469)
|....+..++++.+.+++.+.+| ++.+++++. +|+|+++++..++.++..+ |+ .|+++.++|
T Consensus 87 ~~~~p~~~~le~~~~~~la~l~g--~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h 164 (502)
T 3hbx_A 87 MDEYPVTTELQNRCVNMIAHLFN--APLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQ 164 (502)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTT--CCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCC
T ss_pred hhcChhHHHHHHHHHHHHHHHhC--CCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCch
Confidence 33344567888888888888776 222255544 5999999999998887655 76 899999999
Q ss_pred cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--
Q 043923 146 PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK-- 223 (469)
Q Consensus 146 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~-- 223 (469)
..+...+... |++++.+|+++ +++.+|++++++++++ ++++|++++|+||||.+.+.++ |.++|+++
T Consensus 165 ~s~~~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~l~~---I~~ia~~~~~ 233 (502)
T 3hbx_A 165 VCWEKFARYF-EVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTLNGEFEDVKL---LNDLLVEKNK 233 (502)
T ss_dssp HHHHHHHHHT-TCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTCCBCCHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHc-CceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCCcccCHHH---HHHHHHHhhh
Confidence 9999888877 99999999874 4588999999999875 7899999999999999988555 77788888
Q ss_pred ----CeEEEEecccccccc--CCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHH-HHHH
Q 043923 224 ----NIHLISDEIYSGTVF--SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVV-AAAT 296 (469)
Q Consensus 224 ----~~~iI~Deay~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~-~~~~ 296 (469)
|+++++|++|+++.. -......... ..+..++..|.+|.++ ++.++|++++.+.... ..+.
T Consensus 234 ~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-----------~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~ 301 (502)
T 3hbx_A 234 ETGWDTPIHVDAASGGFIAPFLYPELEWDFR-----------LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELI 301 (502)
T ss_dssp HHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-----------STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGC
T ss_pred ccCCCCeEEEECCccchhhhhhCcccccccC-----------CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhc
Confidence 999999999986431 1111111011 1245666779999774 7788999988654332 2111
Q ss_pred Hhccc-----------cc---CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecC-CceEEE
Q 043923 297 KMSSF-----------GL---VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG-ISCLKS-NAGLFC 360 (469)
Q Consensus 297 ~~~~~-----------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~-~~g~~~ 360 (469)
....+ +. ...+.++++...+.. +.+....++..+..+++.+.|++++ +++..+ ....++
T Consensus 302 ~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (502)
T 3hbx_A 302 FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-----EGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLV 376 (502)
T ss_dssp EEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEE
T ss_pred cCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEE
Confidence 11111 00 123344444444432 2245666777778889999999985 887765 445677
Q ss_pred EEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 361 WVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH-CTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 361 ~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~-~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
++.++.... .+..++.+.| .+.||.+....... ..+..++|++++. .++++++.+++.|++++++.++
T Consensus 377 ~f~~~~~~~----~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 377 AFSLKDSSC----HTEFEISDML-RRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp EEEESSCSS----CCHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCc----CCHHHHHHHH-HhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 788764211 1122455555 46799875433221 1234689999986 5899999999999999987766
No 195
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=8e-25 Score=217.79 Aligned_cols=289 Identities=15% Similarity=0.178 Sum_probs=201.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVE 159 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~ 159 (469)
.|.+..+..++++++|++++ .+++++++|+++|+..++.++ .++||.|+++.|+|..+...+... |++
T Consensus 30 ~~~~~~~~~~l~~~la~~~~----------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~-G~~ 98 (367)
T 3nyt_A 30 QYILGPEVTELEDRLADFVG----------AKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALL-GAK 98 (367)
T ss_dssp CCSSCHHHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred CccCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 45556678999999999986 348999999999999999999 899999999999999999888877 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-cc
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT-VF 238 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~-~~ 238 (469)
++.++++++ .+.+|++++++++++ ++++|+ |+||||...+ +++|.++|++||+++|+|++|+.. .+
T Consensus 99 ~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~ 165 (367)
T 3nyt_A 99 PVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASY 165 (367)
T ss_dssp EEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEE
T ss_pred EEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeE
Confidence 999998753 478899999988754 788766 8889998776 555888899999999999999732 22
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccC--ccccCCCcceEEEEEecCHHHHHHHHHhccc--------------c
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSL--SKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--------------G 302 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~--SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~--------------~ 302 (469)
++.. .. ..+ .+++.|| +|.+|.+|. .|+++++++.+.+.+...... .
T Consensus 166 ~~~~---~~------------~~~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~ 228 (367)
T 3nyt_A 166 KGKR---SC------------NLS-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNS 228 (367)
T ss_dssp TTEE---TT------------SSS-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBC
T ss_pred CCee---cc------------CCC-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCC
Confidence 2211 10 112 4777887 899985587 899999777776665544321 2
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC-Cce---E-EEEEecccccccCChhHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKS-NAG---L-FCWVDMRHLLRSNTFEAEM 377 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~-~~g---~-~~~v~~~~~~~~~~~~~~~ 377 (469)
..+.+...++...+.. +++..++.++..+++.+.|++.++.+... .++ + ++.+.++. ..
T Consensus 229 ~~~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 292 (367)
T 3nyt_A 229 RLDTLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDN---------RE 292 (367)
T ss_dssp CCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSS---------HH
T ss_pred CccHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCC---------HH
Confidence 2445555554444432 23344455556677888888876554322 111 1 23333331 22
Q ss_pred HHHHHHHHhCCeEEeCCCCCCC--------C----------CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 043923 378 ELWKKIVYDVKLNISPGSSCHC--------T----------EPGWFRVCFAN-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 378 ~l~~~ll~~~GI~v~pg~~f~~--------~----------~~~~iRi~~~~-~~~e~i~~~l~~L~~~ 427 (469)
++.+.| +++||.++++..... . ....+|+++.. +++++++.+++.|+++
T Consensus 293 ~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 293 SVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 455555 456999987642000 0 02368999876 5999999999888765
No 196
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.93 E-value=1.4e-23 Score=210.94 Aligned_cols=303 Identities=13% Similarity=0.110 Sum_probs=202.1
Q ss_pred cCCCCCC--cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCC
Q 043923 81 LFQDYHG--LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTG 157 (469)
Q Consensus 81 ~Y~~~~g--~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g 157 (469)
.|.+..| ..+|++++|++++ .++|++++|+++|+..++.++ +++||.|+++.|+|..+...+... |
T Consensus 25 ~~~~~~g~~~~~l~~~la~~~~----------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~-g 93 (394)
T 1o69_A 25 NYIAPLGEFVNRFEQSVKDYSK----------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYL-K 93 (394)
T ss_dssp TTTSCTTHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHT-T
T ss_pred CCccCCChHHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-C
Confidence 3555557 8999999999985 378999999999999999999 899999999999999999888877 9
Q ss_pred CEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-cc
Q 043923 158 VEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GT 236 (469)
Q Consensus 158 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~ 236 (469)
++++.++++ .+|.+|++++++++++. ..++++|++++ |||...+ +++|.++|+++|+++|+||+|+ +.
T Consensus 94 ~~~~~v~~~--~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~ 162 (394)
T 1o69_A 94 AKPVFIDCD--ETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAAEALGS 162 (394)
T ss_dssp CEEEEECBC--TTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTC
T ss_pred CEEEEEEeC--CCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEEEEECcCcccc
Confidence 999999987 46789999999988741 11478888885 8997655 6668889999999999999998 44
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccccc-------------
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL------------- 303 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~------------- 303 (469)
.+.+... ..+ .+.+++..|.+|.+ +|.|+||++++++.+.+.+.....++.
T Consensus 163 ~~~~~~~---~~~-----------~~~~~~s~s~~K~l--~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~ 226 (394)
T 1o69_A 163 FYKNKAL---GTF-----------GEFGVYSYNGNKII--TTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGY 226 (394)
T ss_dssp EETTEET---TSS-----------SSEEEEECCTTSSS--CCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCC
T ss_pred eeCCccc---ccc-----------cCcEEEEEeCCccC--CCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCc
Confidence 3432211 011 12233333345654 567999999965555555544332221
Q ss_pred ---CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC----ceE-EEEEeccccc-------
Q 043923 304 ---VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSN----AGL-FCWVDMRHLL------- 368 (469)
Q Consensus 304 ---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~----~g~-~~~v~~~~~~------- 368 (469)
.+.+...++...+ ++ +++..+++++.++++.+.|+++ +++.++. +++ ++++.++...
T Consensus 227 ~~~~~~~~aa~~l~~l---~~----l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 298 (394)
T 1o69_A 227 NYRLSNVLGAIGVAQM---EV----LEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQ 298 (394)
T ss_dssp BCBCCHHHHHHHHHHH---TT----HHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCC
T ss_pred ccCcCHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccccc
Confidence 1122222221112 22 4556677788888899999887 6555442 333 3566665210
Q ss_pred -------ccCC-hhHHHHHHHHHHHhCCeEEeCCCCC---CCC-CC--------------CeEEEEeec-CCHHHHHHHH
Q 043923 369 -------RSNT-FEAEMELWKKIVYDVKLNISPGSSC---HCT-EP--------------GWFRVCFAN-MSEDTLKLSM 421 (469)
Q Consensus 369 -------~~~~-~~~~~~l~~~ll~~~GI~v~pg~~f---~~~-~~--------------~~iRi~~~~-~~~e~i~~~l 421 (469)
.... ..+..++.+.|. ++||.+++|... .+. .. ..+|+.... .+++|+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~ 377 (394)
T 1o69_A 299 KDINISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEIS 377 (394)
T ss_dssp EEEECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred ccccccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHH
Confidence 0000 012335666654 679999998532 000 00 234444433 5999999999
Q ss_pred HHHHHHHHh
Q 043923 422 QRLKAFVDS 430 (469)
Q Consensus 422 ~~L~~~l~~ 430 (469)
++|+++++.
T Consensus 378 ~~l~~~~~~ 386 (394)
T 1o69_A 378 KLILKSIKA 386 (394)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 999987653
No 197
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=2.7e-25 Score=221.62 Aligned_cols=296 Identities=14% Similarity=0.197 Sum_probs=197.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCE
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVE 159 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~ 159 (469)
.|.+..+..++++++|++++ .+++++++|+++|+..++.++ +++||.|+++.|+|..+...+... |++
T Consensus 31 ~~~~~~~~~~l~~~la~~~~----------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 99 (373)
T 3frk_A 31 WFILGDEDKKFEQEFADYCN----------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYT-GAK 99 (373)
T ss_dssp CCSSSHHHHHHHHHHHHHHT----------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHH-SCE
T ss_pred CccCCchHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCE
Confidence 36666688999999999986 348999999999999999999 899999999999999999888887 999
Q ss_pred EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-c
Q 043923 160 IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-F 238 (469)
Q Consensus 160 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~ 238 (469)
++.++.++ .++.+|++++++++++ ++++|+ |+||||...+ +++|.++|+++|+++|+|++|+... +
T Consensus 100 ~~~~~~~~-~~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~ 166 (373)
T 3frk_A 100 PIFVEPDI-RTYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLY 166 (373)
T ss_dssp EEEECEET-TTTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred EEEEeccc-cccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEE
Confidence 99999874 3578899999988764 788776 7789999887 4558888999999999999998422 2
Q ss_pred CCCCccchhhhhhccccccCCcCCeEEEEccCc--cccCCCcceEEEEEecCHHHHHHHHHhcccc--------------
Q 043923 239 SSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS--KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-------------- 302 (469)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S--K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~-------------- 302 (469)
++.. .. . -..+++.||| |.+|.+|. .|+++++++.+.+.+......+
T Consensus 167 ~~~~------~~---------~-~~d~~~~S~~~~K~l~~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~ 229 (373)
T 3frk_A 167 KGMK------VG---------S-LGDAAGFSFYPAKNLGSLGD-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNS 229 (373)
T ss_dssp TTEE------TT---------S-SSSEEEEECCTTSSSCCSSS-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBC
T ss_pred CCEe------cc---------c-cccEEEEeCcCCCccCccce-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccC
Confidence 2111 10 0 1236677876 98873254 7999987776655554433211
Q ss_pred cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEE--EecccccccCChhHHHHH
Q 043923 303 LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCW--VDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 303 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~--v~~~~~~~~~~~~~~~~l 379 (469)
..+.+...+....+.. +++..++.++..+++.+.|+++++.+.. +.++...| +.+.. .+..++
T Consensus 230 ~~~~~~aa~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l 295 (373)
T 3frk_A 230 RLDELQAGFLRVKLKY-------LDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS-------EKRDEL 295 (373)
T ss_dssp CCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE-------SSHHHH
T ss_pred CCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe-------CCHHHH
Confidence 1233333332222221 3444555556667777777766533321 12222221 11111 012245
Q ss_pred HHHHHHhCCeEEeCCCCCCC--------------C-C------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 380 WKKIVYDVKLNISPGSSCHC--------------T-E------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~--------------~-~------~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+.| .++||.++++..... . . .+.+|+++.. .+++|+++++++|+++..+.-
T Consensus 296 ~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~ 369 (373)
T 3frk_A 296 QKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEHH 369 (373)
T ss_dssp HHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC----
T ss_pred HHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhhc
Confidence 5555 466999997642110 0 0 1579999976 599999999999988766543
No 198
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.93 E-value=1.3e-24 Score=220.27 Aligned_cols=281 Identities=16% Similarity=0.166 Sum_probs=190.8
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH----HHhhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR----DLKWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~----~~~~~~g~~~~~ 162 (469)
...+|++.+|++++ .+..++++++++|+..++.+++++||.|+++.|+|.++.. .+... |++++.
T Consensus 83 ~~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~~~~ 151 (430)
T 3ri6_A 83 TVEDLEQRLKNLTG----------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSF-GIEVRF 151 (430)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHHC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-CCEEEE
Confidence 46788888888875 2335666677899999999999999999999999998877 45556 999999
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 152 v~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~---- 211 (430)
T 3ri6_A 152 VDVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL---- 211 (430)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----
Confidence 9864 78999988864 8999999999999999998 55688899999999999999985322
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEe--cCH-H------------------HHHHHHH-hcc
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYS--NDD-M------------------VVAAATK-MSS 300 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~--~~~-~------------------~~~~~~~-~~~ 300 (469)
.... ..+.++++.|+||.+|.+|..+|.+++ .+. . +...... ...
T Consensus 212 -~~~~------------~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~ 278 (430)
T 3ri6_A 212 -LEAK------------RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQN 278 (430)
T ss_dssp -CCGG------------GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHH
T ss_pred -CChH------------HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHh
Confidence 1111 124568899999999867766655554 221 1 1111111 112
Q ss_pred cc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecCC----------------ceEEEE
Q 043923 301 FG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKSN----------------AGLFCW 361 (469)
Q Consensus 301 ~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~~----------------~g~~~~ 361 (469)
.+ ..++...+++...+ +.+..+.++..++...+.+.|+++ +++ |..|. ||+.+|
T Consensus 279 ~g~~~~~~~a~l~l~~l-------~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~ls 351 (430)
T 3ri6_A 279 LGPSLSPHNAYLQSLGL-------ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILT 351 (430)
T ss_dssp HCCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred cCCCCCHHHHHHHHhhh-------hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence 22 23443333332222 234455566677888889999877 454 44333 555899
Q ss_pred EecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHH
Q 043923 362 VDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEDTLKLS 420 (469)
Q Consensus 362 v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~---------------------~~~~~iRi~~~~~~~e~i~~~ 420 (469)
+.++.. .+...++.. ++..++.+.+|..+.. -.+++||||++. |+.+.+
T Consensus 352 f~l~~~------~~~~~~~~~-l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl 421 (430)
T 3ri6_A 352 FELESK------EASYRFMDA-LKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDL 421 (430)
T ss_dssp EECSSH------HHHHHHHHH-CSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHH
T ss_pred EEECCH------HHHHHHHHh-CCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHH
Confidence 999731 222233333 3345667777776652 135799999985 556667
Q ss_pred HHHHHHHH
Q 043923 421 MQRLKAFV 428 (469)
Q Consensus 421 l~~L~~~l 428 (469)
++.|++++
T Consensus 422 ~~dl~~al 429 (430)
T 3ri6_A 422 KEDILQAL 429 (430)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 77777665
No 199
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=5.6e-24 Score=219.79 Aligned_cols=322 Identities=12% Similarity=0.137 Sum_probs=219.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCC-----CCCcEEEeCChHHHHHHHHHHhcCC---------CC----------
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTF-----DTSKIVLTAGATSANETLMFCLAEP---------GE---------- 136 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~-----~~~~i~~t~G~~~al~~~~~~l~~~---------gd---------- 136 (469)
.|....+..++++++++++.+.+|..... ....+++|+|+|+|+..++.++..+ ||
T Consensus 104 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 104 SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 35444557899999999998887732100 1246899999999999888776321 42
Q ss_pred EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHH
Q 043923 137 AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLL 216 (469)
Q Consensus 137 ~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l 216 (469)
.|+++.+.|..+...+... |++++.+|++ .++.+|+++|+++|++..+.+..+.+|++++|+||||.+-+ +++|
T Consensus 184 ~v~~s~~~h~s~~~~~~~~-G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I 257 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLIG-GVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEV 257 (486)
T ss_dssp EEEEETTCCHHHHHHHHHH-TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCCcHHHHHHHHhC-CCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHH
Confidence 3788999999999988888 9999999986 46789999999999874433334568999999999998855 6669
Q ss_pred HHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-HHHH
Q 043923 217 VNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV-VAAA 295 (469)
Q Consensus 217 ~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~-~~~~ 295 (469)
+++|++||+++++|++|+...+..+.......-+. +...++.|++|+++.| +++|+++++++.. .+.+
T Consensus 258 ~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~----------~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~ 326 (486)
T 1js3_A 258 GPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE----------FADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAF 326 (486)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGG----------GCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGG
T ss_pred HHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcc----------ccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHh
Confidence 99999999999999999875443322222111111 2234457899999855 8999999976643 2221
Q ss_pred HH----hcc-----------------cc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee
Q 043923 296 TK----MSS-----------------FG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL 352 (469)
Q Consensus 296 ~~----~~~-----------------~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~ 352 (469)
.. +.. .+ ....+.++++...+. .+.+++..+++.++++++.+.|++. ++++.
T Consensus 327 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 401 (486)
T 1js3_A 327 KLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC 401 (486)
T ss_dssp C------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred cCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 10 000 00 123345555544442 3346777778888889999999987 78876
Q ss_pred c-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHH
Q 043923 353 K-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 353 ~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~ 429 (469)
. +..++ +.+.++... ....++.+.+.++ |+.+.++..+. +.+++|+++.. .+++++++++++|+++++
T Consensus 402 ~~~~~~~-v~f~~~~~~-----~~~~~l~~~L~~~-g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 402 AEVTLGL-VCFRLKGSD-----GLNEALLERINSA-RKIHLVPCRLR--GQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472 (486)
T ss_dssp SCCCSSE-EEEEESSCH-----HHHHHHHHHHHHH-TSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCceeE-EEEEecChH-----HHHHHHHHHHHhc-CCEEEEEEEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 4 55544 445554210 1123566777655 75543333332 35689999854 378999999999999988
Q ss_pred hhcc
Q 043923 430 SITT 433 (469)
Q Consensus 430 ~~~~ 433 (469)
+..+
T Consensus 473 ~~~~ 476 (486)
T 1js3_A 473 ELLA 476 (486)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7765
No 200
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.2e-23 Score=210.23 Aligned_cols=301 Identities=11% Similarity=0.105 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH--HHHhhhCC--CEEEEee
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD--RDLKWRTG--VEIVPIQ 164 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~~g--~~~~~v~ 164 (469)
.++.+++++.+.+.++ .+ +.|++|+|+++|+..++..+ .+||+|++..+.|..+. ..+... | .+++.++
T Consensus 34 ~~~~~~~~~~l~~~~~----~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~~~~~ 106 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYN----AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKG-KFAKSSTVLT 106 (379)
T ss_dssp HHHHHHHHHHHHHHHT----CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHH-CCSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhC----CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHh-CCCCceEEEe
Confidence 3455555555555544 33 68899999999999988655 79999999999887643 233444 5 4777777
Q ss_pred ccCCC------Cc-ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc
Q 043923 165 CTSLN------GF-QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV 237 (469)
Q Consensus 165 ~~~~~------~~-~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~ 237 (469)
.+..+ .| .+|++++++++++. ++++|++++++||||.+++.+++++|.++|++||+++|+|++++ .
T Consensus 107 ~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g- 179 (379)
T 3ke3_A 107 AERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G- 179 (379)
T ss_dssp CEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T-
T ss_pred ccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C-
Confidence 64311 11 47999999999642 68889999999999999999999999999999999999999975 2
Q ss_pred cCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc------------------
Q 043923 238 FSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS------------------ 299 (469)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~------------------ 299 (469)
.. ...+..+ +..+++.|++|+++ .+.++|+++++++.+ +.+....
T Consensus 180 --~~-~~~~~~~------------~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 242 (379)
T 3ke3_A 180 --CV-WLDMKEL------------GIDVLISAPQKGWS-STPCAGLVMLSAAAI-KKVESTESNCFSLDLKQWLTIMRAY 242 (379)
T ss_dssp --TC-CCCHHHH------------TCSEEEECTTTTTC-SCCCEEEEEECHHHH-HHHHTCCCSCSTTCHHHHHHHHHHH
T ss_pred --Cc-ccccccc------------CCCEEEecchhhcC-CCCceEEEEECHHHH-HhhhcCCCCceeecHHHHHHHHHhh
Confidence 11 1222222 45677889999997 445699999965543 3332100
Q ss_pred -----cc-ccCcHHHHHHHHHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCC---ceEEEEEecccccc
Q 043923 300 -----SF-GLVSSQTQYLLSALLSDKKFTQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSN---AGLFCWVDMRHLLR 369 (469)
Q Consensus 300 -----~~-~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~---~g~~~~v~~~~~~~ 369 (469)
.+ ++.+.....++.++|... .+. +++.+++++++++++.+.|+++|+++..+. .+....+..+..
T Consensus 243 ~~g~~~~~~t~~~~~~~a~~aal~~~---~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~-- 317 (379)
T 3ke3_A 243 ENGGHAYHATMPTDSLRQFRDAILEA---KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERD-- 317 (379)
T ss_dssp HTTSCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCH--
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHHH---HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCc--
Confidence 01 134555666655555421 222 567778888888999999999998876543 222333333311
Q ss_pred cCChhHHHHHHHHHHHhCCeEEeCCCCCCC---CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 370 SNTFEAEMELWKKIVYDVKLNISPGSSCHC---TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~---~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+... ...|.++||.+.+|..+.. ...+.+|+++.. .+++++++++++|++++++..
T Consensus 318 ------~~~~-~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 318 ------DMHK-GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ------HHHS-SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ------chHH-HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 1112 2345577999999986542 236789999975 489999999999999988754
No 201
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.92 E-value=1.3e-23 Score=218.02 Aligned_cols=323 Identities=11% Similarity=0.135 Sum_probs=220.7
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-----C-EEEEccCCCcC
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE--------PG-----E-AFLLPTPYYPG 147 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~P~y~~ 147 (469)
|....+..++++++.+++.+.+|. +.+++++++|+|+++++..++.++.. +| + .|+++.+.|..
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s 201 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 201 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhChHHHHHHHHHHHHHHHHhCC--CCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence 444445567788888888777662 12278999999999999999988742 56 6 78999999999
Q ss_pred hHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 148 FDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 148 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
+...+... |. +++.+|.+ .++.+|+++|+++|++....+.++++|++++|+||||.+.+ +++|+++|++||
T Consensus 202 ~~~~~~~~-g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g 275 (504)
T 2okj_A 202 IKKAGAAL-GFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYN 275 (504)
T ss_dssp HHHHHHHT-TSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHc-CCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcC
Confidence 98888776 76 89999986 36789999999999865444556899999999999999877 556889999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-HHHHHHhcccc-
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV-VAAATKMSSFG- 302 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~-~~~~~~~~~~~- 302 (469)
+++++|++|+...+....+.....- .....+++.|++|.++.| .++|++++.++.+ .........+.
T Consensus 276 ~~lhvD~a~~~~~~~~~~~~~~~~g----------~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~ 344 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSRKHRHKLNG----------IERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLF 344 (504)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTT----------GGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSC
T ss_pred CEEEEehhhhhHHHhCHhhHhhcCC----------cccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCcccc
Confidence 9999999998765543322111111 112346677999999855 7899999976533 33222211111
Q ss_pred ---------------------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec---CCce
Q 043923 303 ---------------------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK---SNAG 357 (469)
Q Consensus 303 ---------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~---~~~g 357 (469)
....+.++++.+++. .+.+++..++..+.++++.+.|++. ++++.. +..+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~ 419 (504)
T 2okj_A 345 QPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHT 419 (504)
T ss_dssp CSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSS
T ss_pred CCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeE
Confidence 012455555555553 2335667777888889999999887 788764 5666
Q ss_pred EEEEEeccccccc--CC-------hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee-c-CCHHHHHHHHHHHHH
Q 043923 358 LFCWVDMRHLLRS--NT-------FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 358 ~~~~v~~~~~~~~--~~-------~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~-~-~~~e~i~~~l~~L~~ 426 (469)
++++...+..... .. .....++.+.++++ |+.+..+..+. ...+++|++++ . .+++++++++++|++
T Consensus 420 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~ 497 (504)
T 2okj_A 420 NVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQG-DKANFFRMVISNPAATQSDIDFLIEEIER 497 (504)
T ss_dssp CEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEEET-TEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeEEC-CceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 6665444432100 00 00123466666655 75433322222 12368999997 3 489999999999999
Q ss_pred HHHh
Q 043923 427 FVDS 430 (469)
Q Consensus 427 ~l~~ 430 (469)
++++
T Consensus 498 ~~~~ 501 (504)
T 2okj_A 498 LGQD 501 (504)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 8765
No 202
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=1.5e-23 Score=217.47 Aligned_cols=326 Identities=11% Similarity=0.138 Sum_probs=222.5
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEEccCCC
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE--------------PGEAFLLPTPYY 145 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y 145 (469)
..|....+..++++++++++.+.+|. +..++.+++|+|+++++..++.++.. +++.|+++.+.|
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g~--~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcccCchHHHHHHHHHHHHHHHhCC--CCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 35666677889999999999998873 23357899999999999988887754 577999999999
Q ss_pred cChHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 146 PGFDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 146 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
..+...+... |+ +++.+|.+ .++.+|+++|+++|++....+..+++|++++|+||||.+-+ +++|+++|++
T Consensus 203 ~s~~~~~~~~-g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~ 276 (511)
T 3vp6_A 203 YSIKKAGAAL-GFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEK 276 (511)
T ss_dssp THHHHHHHHT-TSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHH
Confidence 9999988877 88 89999987 35789999999999875444455899999999999999855 6679999999
Q ss_pred cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-HHHHhccc
Q 043923 223 KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKMSSF 301 (469)
Q Consensus 223 ~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~-~~~~~~~~ 301 (469)
||+++++|++|+...+..+.+.. .... .....+++.+++|+++.| ..+|++++.++.+.. .......+
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~---~~~g-------~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~y 345 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRH---KLNG-------IERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASY 345 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGG---GGTT-------GGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTT
T ss_pred cCCEEEEEccchhhHhhChhhhh---hccC-------CccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCcc
Confidence 99999999999875443322211 1110 113356667999999844 788999887664433 22111111
Q ss_pred c----------------------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceec---CC
Q 043923 302 G----------------------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLK---SN 355 (469)
Q Consensus 302 ~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~---~~ 355 (469)
. ....+..+++..++. .+.+++..++..++.+++.+.|++. |+++.. +.
T Consensus 346 l~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~ 420 (511)
T 3vp6_A 346 LFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPE 420 (511)
T ss_dssp TCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCS
T ss_pred ccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCC
Confidence 0 012333444444432 4456778888888999999999987 888765 44
Q ss_pred ceEEEEEecccccccC--Ch-------hHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHH
Q 043923 356 AGLFCWVDMRHLLRSN--TF-------EAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRL 424 (469)
Q Consensus 356 ~g~~~~v~~~~~~~~~--~~-------~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L 424 (469)
.+.++|.-.|...+.. .. ....++.+.|+++ |+.+.. ..+...+.+++|++++. .++++++.++++|
T Consensus 421 ~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i 498 (511)
T 3vp6_A 421 HTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEI 498 (511)
T ss_dssp SSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHH
T ss_pred eEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHH
Confidence 5444433233322110 00 0122456666655 765443 11112234589999943 4889999999998
Q ss_pred HHHHHhh
Q 043923 425 KAFVDSI 431 (469)
Q Consensus 425 ~~~l~~~ 431 (469)
+++-+.+
T Consensus 499 ~~~~~~~ 505 (511)
T 3vp6_A 499 ERLGQDL 505 (511)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 8776554
No 203
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.92 E-value=2.2e-25 Score=227.63 Aligned_cols=291 Identities=14% Similarity=0.061 Sum_probs=190.2
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIV 161 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~ 161 (469)
|.+...+.++++.+|+ ++ .+ +++++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++
T Consensus 53 ~~~~~~~~~~~~~la~-~g--------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~ 121 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS--------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDIS-QQEGH 121 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT--------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHH-TCCEE
T ss_pred cCcchHHHHHHHHHHh-cC--------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHc-CCeEE
Confidence 3344456788888888 75 33 78999999999999999999999999999999999999888887 99999
Q ss_pred EeeccCCCC----cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc-
Q 043923 162 PIQCTSLNG----FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT- 236 (469)
Q Consensus 162 ~v~~~~~~~----~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~- 236 (469)
.++...+.+ +.+|++++ +. +++++|++++ .|+||.+++ +++|+++|++||+++|+||+|+..
T Consensus 122 ~v~~~~~~~~~~~~~~d~~~l---~~------~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~ 188 (446)
T 2x3l_A 122 FIETHQSPLTNHYNKVNLSRL---NN------DGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHF 188 (446)
T ss_dssp ECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred EEeCeeccccCcCCCCCHHHH---cC------CCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhh
Confidence 998832223 56777777 22 2789999998 556999998 556899999999999999999862
Q ss_pred ccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHH-HHHHH-hc--ccccCcHHHHHHH
Q 043923 237 VFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATK-MS--SFGLVSSQTQYLL 312 (469)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~-~~~~~-~~--~~~~~s~~~q~~~ 312 (469)
.|.+. ..+...+ +..+++.|+||+++ ++.++||++++++.+. ..+.. .. ..++.+.....++
T Consensus 189 ~f~~~-~~~~~~~------------g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal 254 (446)
T 2x3l_A 189 GLQGF-PDSTLNY------------QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASL 254 (446)
T ss_dssp TSTTS-CCCGGGG------------TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHH
T ss_pred ccCCC-CCChHHc------------CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHH
Confidence 23332 2232222 23488899999664 4456899999665432 11211 11 1222333333222
Q ss_pred HHHhcCchhhHHH-HHHHHHHHHHHHHHHHHHHHhcCCceecCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEE
Q 043923 313 SALLSDKKFTQNY-ISENKKRLKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNI 391 (469)
Q Consensus 313 ~~~l~~~~~~~~~-~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v 391 (469)
.+++. ++... .++..++..+..+++.+. |+++..+..+.++|+.++. . +..++.+.|.+ +||.+
T Consensus 255 ~~a~~---~l~~~g~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~-~------~~~~l~~~L~~-~GI~v 319 (446)
T 2x3l_A 255 ESAAQ---FYKTYDSTLFFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEG-F------TGHDIQNWFMN-AHIYL 319 (446)
T ss_dssp HHHHH---HHHHCCCHHHHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTT-S------CHHHHHHHHHH-TTEEE
T ss_pred HHHHH---HHHHhCHHHHHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCC-c------CHHHHHHHHHH-CCCEE
Confidence 22221 10110 011223333333333333 7888766555678998862 1 12345666654 59999
Q ss_pred e-CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 392 S-PGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 392 ~-pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
. +| .+++|++++. .+++++ +++++|+++++...+
T Consensus 320 ~~~g-------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~~~ 355 (446)
T 2x3l_A 320 ELAD-------DYQALAILPLWHHDDTY-LFDSLLRKIEDMILP 355 (446)
T ss_dssp SEEC-------SSCEEEECCCCCTTCCC-CHHHHHHHHHTCCCC
T ss_pred EecC-------CCEEEEEeecCCCHHHH-HHHHHHHHHHHhhcc
Confidence 7 44 3579999985 388999 999999999887653
No 204
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.92 E-value=3.8e-24 Score=218.76 Aligned_cols=293 Identities=12% Similarity=0.101 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---C----------C-CCEEEEccCCCcChHHHHhh
Q 043923 89 PAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA---E----------P-GEAFLLPTPYYPGFDRDLKW 154 (469)
Q Consensus 89 ~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~----------~-gd~Vl~~~P~y~~~~~~~~~ 154 (469)
.+|.+.++++++ ...+++|++++|+++|+..++..+. . + ||.|++.+|.|+++...+..
T Consensus 104 ~~la~~la~~~~-------~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~ 176 (449)
T 2cjg_A 104 ARFVETFARVLG-------DPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLS 176 (449)
T ss_dssp HHHHHHHHHHHC-------CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGG
T ss_pred HHHHHHHHHhcC-------CCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhh
Confidence 455555555552 1357899999999999999987543 2 2 89999999999886543322
Q ss_pred hCC--------C-----EEEEeeccCCCCc--------ccCHHHHHHHHHHHHhcCCceeEEEEecC-CCCCC-CCCCHH
Q 043923 155 RTG--------V-----EIVPIQCTSLNGF--------QITETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLG-TTMSRN 211 (469)
Q Consensus 155 ~~g--------~-----~~~~v~~~~~~~~--------~~d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG-~~~s~e 211 (469)
..| . .++.+|.+..+.. ..+++++++++++. ++++++|+ ++| +|||| .+++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi-~ep~~~~~G~~~~~~~ 252 (449)
T 2cjg_A 177 LTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFV-AEPIQGEGGDRHFRPE 252 (449)
T ss_dssp TCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEE-ECSEETTTTCEECCHH
T ss_pred hcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEE-EeCcCCCCCCccCCHH
Confidence 212 1 4566665420011 13456677777531 23677655 556 68999 589999
Q ss_pred HHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH
Q 043923 212 ELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV 291 (469)
Q Consensus 212 ~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~ 291 (469)
++++|.++|++||+++|+||+|.++.+.+.. ... +... ....+ .|+||++ |+||++++++ +
T Consensus 253 ~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~-~~~~--------~~~di---~t~sK~l-----~iG~~~~~~~-~ 313 (449)
T 2cjg_A 253 FFAAMRELCDEFDALLIFDEVQTGCGLTGTA-WAY-QQLD--------VAPDI---VAFGKKT-----QVCGVMAGRR-V 313 (449)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-STH-HHHT--------CCCSE---EEECGGG-----SSEEEEECGG-G
T ss_pred HHHHHHHHHHHCCcEEEEeccccCCCccCcc-eee-cccC--------CCceE---EEecCcc-----cEEEEEECHH-H
Confidence 9999999999999999999999975444431 121 2211 11233 2789988 7899999654 4
Q ss_pred HHH-----HHH--hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----C--CceecCCceE
Q 043923 292 VAA-----ATK--MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----G--ISCLKSNAGL 358 (469)
Q Consensus 292 ~~~-----~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g--~~v~~~~~g~ 358 (469)
.+. ... ....+..+++++.++.++|+... + +...++++++++++.+.|+++ . +....+.+ .
T Consensus 314 ~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g-~ 387 (449)
T 2cjg_A 314 DEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIE---A--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRG-L 387 (449)
T ss_dssp GGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHH---H--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEET-T
T ss_pred hhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeecc-E
Confidence 332 111 11223467888888887775321 1 234455666667777777653 2 43444554 5
Q ss_pred EEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 359 FCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 359 ~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
|++++++.. ....+++..++ ++||.+.|+. .+++|++++. .+++++++++++|++++++
T Consensus 388 ~~~~~~~~~------~~~~~~~~~l~-~~Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 388 MCAFSLPTT------ADRDELIRQLW-QRAVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EEEEECSSH------HHHHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCh------HHHHHHHHHHH-HCCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 677888642 12345777777 5699999862 4789998765 4999999999999999875
No 205
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.92 E-value=6.2e-24 Score=217.59 Aligned_cols=302 Identities=13% Similarity=0.053 Sum_probs=202.9
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGAT-SANETLMFCLAE--PGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~-~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
..++.+++.+++.+.+| ++++ +++|+|++ .++..++.++.. +|+.|+++.+.|..+...++.. |++++.++
T Consensus 131 ~~~~~~~~~~~la~~~g----~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~-G~~~~~v~ 204 (456)
T 2z67_A 131 MYALTNKILESFFKQLG----LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFV-GMNMRLVE 204 (456)
T ss_dssp HHHHHHHHHHHHHHHTT----CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcC----CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHc-CCCceEEE
Confidence 34556666666666655 4455 99999999 566555555433 6788999999999998888877 99999988
Q ss_pred ccC-CCCcccCHHHHHHHH-HHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCC
Q 043923 165 CTS-LNGFQITETAIEEAY-QLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPG 242 (469)
Q Consensus 165 ~~~-~~~~~~d~~~l~~~i-~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~ 242 (469)
..+ +.++.+|+++++++| ++.. ..++.+|++++|+||||.+.+. ++|.++|+++|+++++|++|+...++..
T Consensus 205 ~~~~~~~~~~d~~~l~~~i~~~~~--~~~~~~vv~~~~nn~tG~i~~l---~~I~~la~~~g~~v~vD~A~~~~~~g~~- 278 (456)
T 2z67_A 205 TVLDGDRVYVPVEDIENAIKKEIE--LGNRPCVLSTLTFFPPRNSDDI---VEIAKICENYDIPHIINGAYAIQNNYYL- 278 (456)
T ss_dssp CEEETTEEECCHHHHHHHHHHHHH--TTCCEEEEEESSCCTTBCCCCH---HHHHHHHHHHTCCEEEECTTTTTCHHHH-
T ss_pred EeccCCCCCcCHHHHHHHHHHHhh--CCCeEEEEEeCCCCCCCCcCCH---HHHHHHHHHcCCcEEEECcchHHHHHhh-
Confidence 732 356789999999999 4211 1267788899999999999874 5588889999999999999986432110
Q ss_pred ccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhccccc--CcHHHHHHHHHHhcCch
Q 043923 243 FVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL--VSSQTQYLLSALLSDKK 320 (469)
Q Consensus 243 ~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~ 320 (469)
........ . ...+++.|++|.++ ++.++||++++++.+...+......+. .+.+.+.++...+.
T Consensus 279 -~~~~~~~~--------~-~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--- 344 (456)
T 2z67_A 279 -EKLKKAFK--------Y-RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG--- 344 (456)
T ss_dssp -HHHHHHHT--------S-CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---
T ss_pred -HHHHHhhC--------C-CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH---
Confidence 01111111 1 23356789999775 678999999965554444432211111 11333444443332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEec--ccccccCChhHHHHHHHHHHHhCCe---EE
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDM--RHLLRSNTFEAEMELWKKIVYDVKL---NI 391 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~--~~~~~~~~~~~~~~l~~~ll~~~GI---~v 391 (469)
...+++..+++.+.++++.+.|+++ |+.+.+++ .++++.+ +.. ..++...|. +.|| .+
T Consensus 345 --~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~--------~~~l~~~L~-~~gi~~~rv 411 (456)
T 2z67_A 345 --SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISVNSD--------PVEIAAKLY-NLRVTGPRG 411 (456)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSSC--------HHHHHHHHH-HTTEESCEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEecccH--------HHHHHHHHH-HcCCCcceE
Confidence 3345777888888889999999887 88777766 4556666 321 124556655 4565 45
Q ss_pred e------CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 392 S------PGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 392 ~------pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
. +|..|.....+++|++++. .+++++++++++|++++
T Consensus 412 ~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 412 IKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp ECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred EeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 4 2444444345799999984 59999999999998764
No 206
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.92 E-value=1.9e-23 Score=212.89 Aligned_cols=294 Identities=15% Similarity=0.145 Sum_probs=198.9
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCEEEEccCCCcChHHHH
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL---------AEPGEAFLLPTPYYPGFDRDL 152 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l---------~~~gd~Vl~~~P~y~~~~~~~ 152 (469)
|.+..+..+|++++|++++ . +++++++++++|+..++.++ +++||.|+++.|+|..+...+
T Consensus 58 ~~~~~~~~~l~~~la~~~g--------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~ 127 (437)
T 3bb8_A 58 LTTGRFNDAFEKKLGEYLG--------V--PYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT 127 (437)
T ss_dssp CBSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHC--------C--CcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH
Confidence 4445578999999999996 2 26777888889999999998 789999999999999999888
Q ss_pred hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec-CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 153 KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN-PSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~-P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
... |++++.+++++ .++.+|++++++++++ ++++|++++ |+|| . ++++|.++|+++|+++|+|+
T Consensus 128 ~~~-g~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~----~---~~~~i~~l~~~~~~~li~D~ 192 (437)
T 3bb8_A 128 IQN-GLIPVFVDVDI-PTYNVNASLIEAAVSD------KTKAIMIAHTLGNL----F---DLAEVRRVADKYNLWLIEDC 192 (437)
T ss_dssp HHT-TCEEEECCEET-TTTEECGGGHHHHCCT------TEEEEEEECGGGCC----C---CHHHHHHHHHHHTCEEEEEC
T ss_pred HHc-CCEEEEEeccC-ccCCcCHHHHHHhcCC------CCeEEEEeCCCCCh----h---cHHHHHHHHHHcCCEEEEEC
Confidence 877 99999999874 3578999999988864 789998884 5555 3 46778999999999999999
Q ss_pred cccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc---------
Q 043923 232 IYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG--------- 302 (469)
Q Consensus 232 ay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~--------- 302 (469)
+|+....... .. + . ... .+++.||+|+++++|.+.|++++++..+...+.....++
T Consensus 193 a~~~g~~~~~--~~---~-~--------~~~-d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (437)
T 3bb8_A 193 CDALGSTYDG--KM---A-G--------TFG-DIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGC 257 (437)
T ss_dssp TTCTTCEETT--EE---T-T--------SSS-SEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC------
T ss_pred ccccCceECC--ee---c-c--------ccc-CEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccc
Confidence 9983211111 11 1 0 111 266789988888899999999997676655433211110
Q ss_pred --------------------------------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 043923 303 --------------------------------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GI 349 (469)
Q Consensus 303 --------------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~ 349 (469)
..+.+...++.+.|.. +....++.++..+++.+.|+++ |+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~ 330 (437)
T 3bb8_A 258 DNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEKRKANFKYLKDALQSCADF 330 (437)
T ss_dssp ----------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGGTTT
T ss_pred ccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhccCCc
Confidence 0123444444333322 1233333355667788888877 66
Q ss_pred ceecCC-----ce---EEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC----CC--------C--------
Q 043923 350 SCLKSN-----AG---LFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH----CT--------E-------- 401 (469)
Q Consensus 350 ~v~~~~-----~g---~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~----~~--------~-------- 401 (469)
.+.+.. .+ +.+.++.+... +..++...|. ++||.++++.... +. .
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~-~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 403 (437)
T 3bb8_A 331 IELPEATENSDPSWFGFPITLKEDSGV------SRIDLVKFLD-EAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDR 403 (437)
T ss_dssp EECCCCCTTEECCCSSEEEEECGGGSS------CHHHHHHHHH-HTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHH
T ss_pred cccCCCCCCCceeeEEEEEEECCcCcC------cHHHHHHHHH-HCCCceeccCCcccccCchhhccCccccCCCcHHHH
Confidence 554321 02 23334443111 1224555554 5699999875411 00 0
Q ss_pred --CCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 043923 402 --PGWFRVCFAN-MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 402 --~~~iRi~~~~-~~~e~i~~~l~~L~~~l~ 429 (469)
.+.+||++.. ++++++++++++|+++++
T Consensus 404 ~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 404 IMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 1249999876 599999999999998764
No 207
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.91 E-value=2.8e-23 Score=215.11 Aligned_cols=316 Identities=10% Similarity=0.154 Sum_probs=212.3
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCC-CcEEEeCChHHHHHHHHHHh----c---------CC------CC-EEEE
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDT-SKIVLTAGATSANETLMFCL----A---------EP------GE-AFLL 140 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l----~---------~~------gd-~Vl~ 140 (469)
|.......++++++.+++.+.+| .++ +.+++|+|+++++..++.++ + .+ |+ .|++
T Consensus 132 ~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~ 207 (497)
T 2qma_A 132 WDQASSATYVEQKVVNWLCDKYD----LSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC 207 (497)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTT----CCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE
T ss_pred hhhChHHHHHHHHHHHHHHHHhC----CCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE
Confidence 44444567888888888877766 334 78999999999999988873 2 12 46 7999
Q ss_pred ccCCCcChHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHH
Q 043923 141 PTPYYPGFDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLV 217 (469)
Q Consensus 141 ~~P~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~ 217 (469)
+.+.|..+...+... |. +++.+|++ .++.+|+++|+++|++....+.++.+|++++|+||||.+.+ +++|+
T Consensus 208 s~~~h~s~~~~~~~~-g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~ 281 (497)
T 2qma_A 208 SKKSHFTVQKSASWM-GLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIA 281 (497)
T ss_dssp ETTSCTHHHHHHHHT-TSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHH
T ss_pred CCCchHHHHHHHHHc-CCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHH
Confidence 999999888887766 66 78999986 46789999999999763322223558889999999999876 56688
Q ss_pred HHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHH
Q 043923 218 NIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 218 ~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~ 297 (469)
++|++||+++++|++|+...+... +.. .... .....+++.|++|+++.| .++|++++.++...+.+..
T Consensus 282 ~l~~~~~~~l~vD~a~~~~~~~~~-~~~---~~~g-------i~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~ 349 (497)
T 2qma_A 282 DMAVKHDMWMHVDGAYGGALILSS-HKS---RLKG-------VERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLH 349 (497)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGST-TGG---GGTT-------GGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC
T ss_pred HHHHHcCCEEEEehhhhHHHHhCc-chH---hhcC-------cccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcC
Confidence 999999999999999987654322 111 1110 112346677999999855 7999999876543222111
Q ss_pred hccccc------C-------------cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee-cCCc
Q 043923 298 MSSFGL------V-------------SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL-KSNA 356 (469)
Q Consensus 298 ~~~~~~------~-------------s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~~ 356 (469)
...+.. . ..+.++++...+. .+.+++..+++.+.++++.+.|++. ++++. ++..
T Consensus 350 ~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 424 (497)
T 2qma_A 350 HADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-----PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSL 424 (497)
T ss_dssp --------------------CCSCCCTHHHHHHHHHHTC-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSS
T ss_pred CchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCc
Confidence 011100 0 1223333334432 2345667777888889999999987 78775 4445
Q ss_pred eEEEEEecccccccCChh-HHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee-c-CCHHHHHHHHHHHHHHHHh
Q 043923 357 GLFCWVDMRHLLRSNTFE-AEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 357 g~~~~v~~~~~~~~~~~~-~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~-~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.++++.+.... .... ...++...+. +.|+.+.++..+. +.+++|+++. . .+++++++++++|++++++
T Consensus 425 -~~v~f~~~~~~--~~~~~l~~~l~~~l~-~~G~~~~~~~~~~--g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 425 -STVLFRATHET--ADLDELNKALRLEAL-TRGIAVLGETIVD--GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp -SEEEEEECCSS--SCHHHHHHHHHHHHH-HHTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEEEcCCc--cCHHHHHHHHHHHHH-hCCCEEEEeeEEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 46667765321 0111 1223445555 4599887654442 3568999983 3 4899999999999998875
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.91 E-value=5.5e-23 Score=206.71 Aligned_cols=282 Identities=15% Similarity=0.180 Sum_probs=190.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH-----hhhCCCEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL-----KWRTGVEIV 161 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~-----~~~~g~~~~ 161 (469)
...+|++.+|++++ .+.+++++++++|+.. +..++++||.|+++.|+|.+....+ ... |++++
T Consensus 68 ~~~~l~~~la~l~g----------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~-g~~~~ 135 (400)
T 3nmy_A 68 TRFAYERCVAALEG----------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTA-GLDFS 135 (400)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHH-CCEEE
T ss_pred HHHHHHHHHHHHhC----------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhc-CeEEE
Confidence 34677888887764 3366777777999998 5678899999999999998655443 334 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+||+|+...+..+
T Consensus 136 ~v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~ 199 (400)
T 3nmy_A 136 FVDLT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRP 199 (400)
T ss_dssp EECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCG
T ss_pred EECCC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCCh
Confidence 98864 78899988864 8899999999999999998 66689999999999999999985433211
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEE--EEecCHHHHHHHHHhcc-c-ccCcHHHHHHHHHHhc
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGA--IYSNDDMVVAAATKMSS-F-GLVSSQTQYLLSALLS 317 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~--li~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~ 317 (469)
. ..+.++++.|+||.+|.+|.++|. +++.++.+.+.+..... + ...++...+++.+.++
T Consensus 200 -----~------------~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~ 262 (400)
T 3nmy_A 200 -----L------------SLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLK 262 (400)
T ss_dssp -----G------------GGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT
T ss_pred -----h------------hcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh
Confidence 1 124568899999999878877755 55556655554443322 2 2355666666555554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CceEEEEEecccccccCChhHHHHH
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKA-GIS-CLKS----------------NAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
. +..+.++..++.+.+.+.|+++ .+. +..| ..|.++++.++... +....+
T Consensus 263 ~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~~ 330 (400)
T 3nmy_A 263 T-------LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKRF 330 (400)
T ss_dssp T-------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHHH
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHHH
Confidence 4 3344556677778888888876 232 3222 13678889886421 111122
Q ss_pred HHHHHHhCCeEEeCCCCCC----------C-----------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISPGSSCH----------C-----------TEPGWFRVCFANMSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~----------~-----------~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~ 429 (469)
+.. ++-.++.+..|..+. . -.++.+|+|++. |+.+.+++.|+++++
T Consensus 331 ~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 331 CEK-TELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp HHH-CSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred HHc-CCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 222 233344444444322 0 125789999985 456667777888776
No 209
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.91 E-value=1e-22 Score=203.28 Aligned_cols=293 Identities=16% Similarity=0.183 Sum_probs=194.4
Q ss_pred CcHHHHHHH-HHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCCcChHHHHhhhCCCEEEEee
Q 043923 87 GLPAFKKAL-VEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCL-AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQ 164 (469)
Q Consensus 87 g~~~Lr~ai-a~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~ 164 (469)
...+|++++ |++++ ..+++++++|+++|+..++.++ +++||.|+++.|+|..+...+... |++++.++
T Consensus 37 ~~~~l~~~~~a~~~g---------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~-G~~~~~v~ 106 (377)
T 3ju7_A 37 INQRFEQTIMSGFFQ---------NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWC-GLEPYFID 106 (377)
T ss_dssp HHHHHHHHHHHHTST---------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHHhC---------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEe
Confidence 468999999 99874 2567899999999999999998 899999999999999999888877 99999999
Q ss_pred ccCCCCcccCHHHHHHHH-HHHHhcCCc--eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 165 CTSLNGFQITETAIEEAY-QLAQKRHLK--VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 165 ~~~~~~~~~d~~~l~~~i-~~~~~~~~~--~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
+++ ++|.+|++++++++ ++ + +++|+ |+||+|...+.+ +|.++|+ ||++||+|++|+.......
T Consensus 107 ~~~-~~~~~d~~~l~~~i~~~------~~~tk~v~---~~~~~G~~~~~~---~i~~la~-~~~~vi~D~a~a~g~~~~~ 172 (377)
T 3ju7_A 107 ISI-DDWYMDKTVLWDKIEEL------KEEVAIVV---PYATFGSWMNLE---EYEELEK-KGVPVVVDAAPGFGLMNGG 172 (377)
T ss_dssp BCT-TTCSBCHHHHHHHHHHH------GGGEEEEC---CBCGGGBCCCCH---HHHHHHH-TTCCBEEECTTCTTCEETT
T ss_pred cCC-ccCCcCHHHHHHHHhcC------CCCceEEE---EECCCCCccCHH---HHHHHHh-cCCEEEEECCCccCCeECC
Confidence 874 46889999999998 43 5 88766 778999998854 5788888 9999999999973211111
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccc--------------cCcHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG--------------LVSSQ 307 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~--------------~~s~~ 307 (469)
..+... ..+..++..+.+|.++ +| +.|+++++++.+.+.++.+...+ .++.+
T Consensus 173 --~~~g~~----------~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~ 238 (377)
T 3ju7_A 173 --MHYGQD----------FSGMIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEY 238 (377)
T ss_dssp --EETTTT----------CSSEEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHH
T ss_pred --EeccCC----------CCcEEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHH
Confidence 010000 1133333334579998 46 67899988877776666554321 13444
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC---CceecCCc--eE--EEEEecccccccCChhHHHHHH
Q 043923 308 TQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAG---ISCLKSNA--GL--FCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 308 ~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g---~~v~~~~~--g~--~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
.+.++...+.. ++...++.++..+++.+.|++++ +.+.+..+ .+ |+.+.+++.. +..++.
T Consensus 239 ~aa~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~ 305 (377)
T 3ju7_A 239 AAAIGIATMKK-------WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVI 305 (377)
T ss_dssp HHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHH
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHH
Confidence 44444444432 33444455556666777777764 33332221 11 3344444311 122455
Q ss_pred HHHHHhCCeEEeCCCC--CCC--------CC---------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 381 KKIVYDVKLNISPGSS--CHC--------TE---------PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~--f~~--------~~---------~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.| +++||.++.+.. ++. .. .+.+|+.+.. ++++++++.++.|++++.+.
T Consensus 306 ~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 306 EDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 554 567999987641 110 00 2369999875 59999999999999888764
No 210
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.91 E-value=2e-22 Score=206.44 Aligned_cols=346 Identities=14% Similarity=0.090 Sum_probs=202.2
Q ss_pred CeeeeeccccccChHHHHHHHhcC-CCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCc---E
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRN-PDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSK---I 114 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~---i 114 (469)
..|.|..++|..++ .+.+++... .+... +| ......|....-..+|++...+.+.+.+| .+.+. .
T Consensus 55 ~~i~lias~n~~~~-~V~eA~~~~l~~~y~---~G---~~g~r~~~G~~~~~~lE~~a~~~~a~l~g----~~~~~~~~~ 123 (490)
T 2a7v_A 55 RGLELIASENFCSR-AALEALGSCLNNKYS---EG---YPGKRYYGGAEVVDEIELLCQRRALEAFD----LDPAQWGVN 123 (490)
T ss_dssp HSEECCTTCCCCCH-HHHHHHTSGGGTCCC---CC---------------CTHHHHHHHHHHHHHTT----CCTTTEEEE
T ss_pred cCceEECCCCCCCH-HHHHHHHHHHcCCCc---cC---CCcccccCccHHHHHHHHHHHHHHHHHcC----CCcccCceE
Confidence 45788887877544 444444432 11000 00 00011122222234777444455555444 44442 3
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH--------HHhhhCCCE--EEEeeccCCCCcccCHHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR--------DLKWRTGVE--IVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~~g~~--~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++++++++|+..++.++++|||+|++++|.|.++.. .+... |.. ++++++++ .++.+|++++++.+.+
T Consensus 124 v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~-g~~~~~~~~~vd~-~~~~iD~d~le~~l~~ 201 (490)
T 2a7v_A 124 VQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISAT-SIFFESMPYKLNP-KTGLIDYNQLALTARL 201 (490)
T ss_dssp CCCSSHHHHHHHHHHHHCCSCEECCC--------------------------------CCBCT-TTCSBCHHHHHHHHHH
T ss_pred EeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHc-CCeEEEEeccccc-ccCCcCHHHHHHHHhh
Confidence 456678999999999999999999999998865421 12233 554 34444443 3568999999999875
Q ss_pred HHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc-ccccCCCCccchhhhhhccccccCCcCCe
Q 043923 185 AQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS-GTVFSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
. ++++|+++.|+||+ ..+ +++|.++|++||+++++|+++. ++++.+.. .+.. + ..
T Consensus 202 ~-----~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~-~~~~---~----------~a 257 (490)
T 2a7v_A 202 F-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVI-PSPF---K----------HA 257 (490)
T ss_dssp H-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSS-CCGG---G----------TC
T ss_pred c-----CCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcC-CCCC---C----------CC
Confidence 3 68888888889885 334 6779999999999999999975 33333321 2211 1 23
Q ss_pred EEEEccCccccCCCcceEEEEEecCH--------------HHHHHHHHhccc---ccCcHHHHHHHHHHhcCchhhHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDD--------------MVVAAATKMSSF---GLVSSQTQYLLSALLSDKKFTQNYI 326 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~--------------~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~ 326 (469)
.+++.|+||++ .|.|.|++++++. .+.+.+++.... +..+.....++..++.... ....
T Consensus 258 Div~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~--~~~~ 333 (490)
T 2a7v_A 258 DIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQAC--TPMF 333 (490)
T ss_dssp SEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHH--SHHH
T ss_pred CEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHh--hhhH
Confidence 47788999998 4567799998764 234444433221 2223333333333333211 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCC---CCCC
Q 043923 327 SENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCH---CTEP 402 (469)
Q Consensus 327 ~~~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~---~~~~ 402 (469)
++.++++.+++++|.+.|.+.|+++.. ....+++|++++.... +. ..+.+.|++.||.+..+..++ +..+
T Consensus 334 ~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~-----~~-~~~~~~L~~~GI~v~~~~~p~d~~p~~~ 407 (490)
T 2a7v_A 334 REYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL-----DG-ARAERVLELVSITANKNTCPGDRSAITP 407 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTC-----CH-HHHHHHHHHTTEECEEECCTTCCCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCC-----CH-HHHHHHHHhCCeEEecCccCCCCCCCCC
Confidence 667778888999999999999998865 3345788999864210 11 234556678899998654333 2235
Q ss_pred CeEEEEeec-----CCHHHHHHHHHHHHHHHHhh
Q 043923 403 GWFRVCFAN-----MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 403 ~~iRi~~~~-----~~~e~i~~~l~~L~~~l~~~ 431 (469)
+.+|++... .++++++++++.|.++++..
T Consensus 408 ~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 408 GGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp SEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 789997732 47899999999999988754
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.90 E-value=6.1e-23 Score=207.20 Aligned_cols=283 Identities=13% Similarity=0.092 Sum_probs=185.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVP 162 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~ 162 (469)
...+|++.+|++++ .+.+++++|+++|+..++.+++++||.|+++.|.|.+....+ +.. |+++..
T Consensus 83 ~~~~le~~lA~l~g----------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~-G~~v~~ 151 (415)
T 2fq6_A 83 THFSLQQAMCELEG----------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKL-GVTTSW 151 (415)
T ss_dssp HHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGG-TCEEEE
T ss_pred hHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CcEEEE
Confidence 35779999999885 245777789999999999999999999999999998876543 345 999998
Q ss_pred eeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccccccccCC
Q 043923 163 IQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSS 240 (469)
Q Consensus 163 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~--~~~~iI~Deay~~~~~~~ 240 (469)
++.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+..++ .
T Consensus 152 v~~~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~ 214 (415)
T 2fq6_A 152 FDPL-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F 214 (415)
T ss_dssp ECTT-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S
T ss_pred ECCC-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C
Confidence 8753 67888888764 7899999999999999998 5568889999 9999999999985422 1
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCccccCCCcce-EEEEEecCHHHHHHHHHh-cccc-cCcHHHHHHHHHHhc
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFR-VGAIYSNDDMVVAAATKM-SSFG-LVSSQTQYLLSALLS 317 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR-iG~li~~~~~~~~~~~~~-~~~~-~~s~~~q~~~~~~l~ 317 (469)
. ++ .+ +.++++.|+||.+|.+|.+ +||+++++..+ +.+... ...+ ..++...+++...+
T Consensus 215 ~---p~-~~------------g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~-~~l~~~~~~~G~~~~~~~a~~~~~~l- 276 (415)
T 2fq6_A 215 K---AL-DF------------GIDVSIQAATKYLVGHSDAMIGTAVCNARCW-EQLRENAYLMGQMVDADTAYITSRGL- 276 (415)
T ss_dssp C---GG-GG------------TCSEEEEETTTTTTCSSSCCCEEEEECTTTH-HHHHHHHHHTTCCCCHHHHHHHHHHH-
T ss_pred C---cc-cc------------CCeEEEEeCccccCCCCCceEEEEEeCHHHH-HHHHHHHHhcCCCCCHHHHHHHHhhh-
Confidence 1 11 11 4568899999999977755 59999866543 333322 2222 23444333333322
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc-eecC----------------CceEEEEEecccccccCChhHHHHH
Q 043923 318 DKKFTQNYISENKKRLKQRHRKLVSGLEKAG-IS-CLKS----------------NAGLFCWVDMRHLLRSNTFEAEMEL 379 (469)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~-v~~~----------------~~g~~~~v~~~~~~~~~~~~~~~~l 379 (469)
+.+..+.++..++.+.+.+.|++.. +. +..| ..|..+++.+++... ..+...+
T Consensus 277 ------~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~---~~~~~~~ 347 (415)
T 2fq6_A 277 ------RTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN---NEELANY 347 (415)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCC---HHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCC---HHHHHHH
Confidence 2244555566677788888887752 22 2111 135577888874200 0112222
Q ss_pred HHHHHHhCCeEEeCCCCCC-------------------CCCCCeEEEEeecC-CHHHHHHHHHHHH
Q 043923 380 WKKIVYDVKLNISPGSSCH-------------------CTEPGWFRVCFANM-SEDTLKLSMQRLK 425 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~-------------------~~~~~~iRi~~~~~-~~e~i~~~l~~L~ 425 (469)
+.. ++..++.+..|+.+. ...++.||+|++.. ++++++.+.++|+
T Consensus 348 l~~-l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~ 412 (415)
T 2fq6_A 348 LDN-FSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA 412 (415)
T ss_dssp HTT-CSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHH
T ss_pred HHh-CCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 222 223345555553211 01247899999963 4455555555554
No 212
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=5.4e-22 Score=206.29 Aligned_cols=321 Identities=14% Similarity=0.187 Sum_probs=213.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC------EEEEccCCCcC
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLA-------E-PGE------AFLLPTPYYPG 147 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-------~-~gd------~Vl~~~P~y~~ 147 (469)
|...++..++.+++.+++.+.+| .+++++++|+|+++|+..++.++. + +|+ .|++..+.|..
T Consensus 140 ~~~s~~~~~le~~~~~~la~l~g----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 140 YEIAPVFVLMEEEVLRKLRALVG----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHT----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhchHHHHHHHHHHHHHHHHhC----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 44444556777777777766665 457899999999999998888763 2 575 89999999999
Q ss_pred hHHHHhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 148 FDRDLKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 148 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
+...+... |. +++.+|.+ .++.+|+++|+++|++....+.++++|++++|+||||.+.+ +++|+++|++||
T Consensus 216 ~~~~~~~~-g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g 289 (515)
T 2jis_A 216 IQKGAAFL-GLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHG 289 (515)
T ss_dssp HHHHHHHT-TSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHc-CCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcC
Confidence 98888776 87 89999986 35789999999999864444446899999999999999987 556889999999
Q ss_pred eEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH--HHHHHHHHhcc--
Q 043923 225 IHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD--MVVAAATKMSS-- 300 (469)
Q Consensus 225 ~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~--~~~~~~~~~~~-- 300 (469)
+++++|++|+...+..+.+.. .+.. ..+..+++.|++|+++ .+.++|++++.++ .+.+.......
T Consensus 290 ~~l~vD~a~~~~~~~~~~~~~---~~~g-------~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl 358 (515)
T 2jis_A 290 LWLHVDAAWGGSVLLSQTHRH---LLDG-------IQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYL 358 (515)
T ss_dssp CEEEEEETTGGGGGGCTTTGG---GGTT-------GGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC-----
T ss_pred CeEEEehhhhhHHHhChhhHh---hcCC-------CccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhc
Confidence 999999999976554332221 1110 1134577889999997 4468999999766 33332110000
Q ss_pred ------------cc--------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC-CceE
Q 043923 301 ------------FG--------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS-NAGL 358 (469)
Q Consensus 301 ------------~~--------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~-~~g~ 358 (469)
++ ....+.++++.+.+. ...+++..++..+..+++.+.|++. |+++..+ ..+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~ 433 (515)
T 2jis_A 359 FQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVN 433 (515)
T ss_dssp ----CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSE
T ss_pred cCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeE
Confidence 00 011344444444443 2335667777888889999999987 7877653 3445
Q ss_pred EEEEeccccccc----CChhHH-----HHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEee-c-CCHHHHHHHHHHHHHH
Q 043923 359 FCWVDMRHLLRS----NTFEAE-----MELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFA-N-MSEDTLKLSMQRLKAF 427 (469)
Q Consensus 359 ~~~v~~~~~~~~----~~~~~~-----~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~-~-~~~e~i~~~l~~L~~~ 427 (469)
+++...+..... ...... ..+...+. +.|+........ ....+++|++++ . .+++++++++++|+++
T Consensus 434 v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~ 511 (515)
T 2jis_A 434 VCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPH-GTRGNFFRVVVANSALTCADMDFLLNELERL 511 (515)
T ss_dssp EEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 444333432111 111111 12344455 447654321100 112468999994 3 4899999999999988
Q ss_pred HHh
Q 043923 428 VDS 430 (469)
Q Consensus 428 l~~ 430 (469)
+++
T Consensus 512 ~~~ 514 (515)
T 2jis_A 512 GQD 514 (515)
T ss_dssp HTT
T ss_pred Hhh
Confidence 764
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.90 E-value=5.7e-22 Score=204.30 Aligned_cols=323 Identities=12% Similarity=0.113 Sum_probs=225.8
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCC------CCCcEEEeCChHHHHHHHHHHhcC-------------------C
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTF------DTSKIVLTAGATSANETLMFCLAE-------------------P 134 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~------~~~~i~~t~G~~~al~~~~~~l~~-------------------~ 134 (469)
..|....+..++++++++++.+.+|..... .....++|+|+++++..++.+..+ +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 356666788999999999999987732100 013678999999999988877632 5
Q ss_pred CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHH
Q 043923 135 GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELN 214 (469)
Q Consensus 135 gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~ 214 (469)
++.|+++.+.|..+...+... |++++.+|++ .++.+|+++|+++|++....+..+.+|+++.++|+||.+-+ ++
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~~-g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~ 261 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLIS-LVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LS 261 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHHH-TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HH
T ss_pred CeEEEEcCcchHHHHHHHHhC-CCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HH
Confidence 679999999999999888877 9999999986 46789999999999875444445788899999999998866 66
Q ss_pred HHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHH-
Q 043923 215 LLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVA- 293 (469)
Q Consensus 215 ~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~- 293 (469)
+|+++|++||+++++|++|+...+..+.... .... ......+..+++|+++.| ..+|+++..++....
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~---~~~g-------i~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~ 330 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLCPEFRG---FLKG-------IEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQ 330 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGSGGGGG---GGTT-------GGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHT
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhChhhHH---HhcC-------cccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHH
Confidence 6999999999999999999865333222111 1110 112245567999999854 567888876665422
Q ss_pred HHHHhcccc--------------------cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee
Q 043923 294 AATKMSSFG--------------------LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL 352 (469)
Q Consensus 294 ~~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~ 352 (469)
.+.....+. ....+.++++...+. .+.+++..++..++.+++.+.|++. |+++.
T Consensus 331 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 331 TFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp TTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred HhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 111110110 012344555555442 3345677788888899999999987 88887
Q ss_pred cCCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-C-CHHHHHHHHHHHHHHHHh
Q 043923 353 KSNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-M-SEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 353 ~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~-~~e~i~~~l~~L~~~l~~ 430 (469)
.+....++++.++... ....++.+++.++..+.+.|+... +..++|+++.. . +++++++++++|++++++
T Consensus 406 ~~~~~~~v~f~~~~~~-----~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 406 AKRHLGLVVFRLKGPN-----SLTENVLKEIAKAGRLFLIPATIQ---DKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp SCCCSSEEEEEESSCH-----HHHHHHHHHHHHHCSSBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCceeEEEEEeCCch-----HHHHHHHHHHHhCCeEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 6555577788875311 223467777776633555554322 35689999865 2 789999999999999876
Q ss_pred hc
Q 043923 431 IT 432 (469)
Q Consensus 431 ~~ 432 (469)
.-
T Consensus 478 l~ 479 (481)
T 4e1o_A 478 IL 479 (481)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 214
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.90 E-value=6.9e-22 Score=203.27 Aligned_cols=322 Identities=12% Similarity=0.105 Sum_probs=221.9
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCC-----CCCcEEEeCChHHHHHHHHHHhcC-------------------CCC
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTF-----DTSKIVLTAGATSANETLMFCLAE-------------------PGE 136 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~-----~~~~i~~t~G~~~al~~~~~~l~~-------------------~gd 136 (469)
.|...++..+|++++++++.+.+|..... .....++|+|+|+++..++.+... +++
T Consensus 104 ~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 104 TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 46666678899999999999887732100 013689999999999888877521 346
Q ss_pred EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHH
Q 043923 137 AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLL 216 (469)
Q Consensus 137 ~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l 216 (469)
.|+++.+.|..+...+... |++++.+|++. ++ +|+++|+++|++....+..+.+|+++.++|+||.+-+ +++|
T Consensus 184 ~vi~s~~~H~s~~~~~~~~-g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I 256 (475)
T 3k40_A 184 VGYCSDQAHSSVERAGLLG-GVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDEC 256 (475)
T ss_dssp EEEEETTSCHHHHHHHHHH-TCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHH
T ss_pred EEEECCCchHHHHHHHHHc-CCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHH
Confidence 8999999999999888877 99999999873 56 9999999999875444445788899999999999866 6668
Q ss_pred HHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-HHHH
Q 043923 217 VNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV-VAAA 295 (469)
Q Consensus 217 ~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~-~~~~ 295 (469)
+++|++||+++++|++|+...+..+.... .... ......+..+++|+++ ....+|++++.+... .+.+
T Consensus 257 ~~la~~~~~~lhvD~A~~~~~~~~~~~~~---~~~g-------i~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~ 325 (475)
T 3k40_A 257 GPVGNKHNLWIHVDAAYAGSAFICPEYRH---LMKG-------IESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAF 325 (475)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSGGGGG---GGTT-------GGGCSEEEECHHHHSS-CCSSCEEEEESSGGGC----
T ss_pred HHHHHHhCCeEEEeHHhHHHHHhCHhhHH---HhcC-------cccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHh
Confidence 99999999999999999864332221111 1110 1123456679999987 446788888865533 2221
Q ss_pred HHhcccc------------------c--CcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC
Q 043923 296 TKMSSFG------------------L--VSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS 354 (469)
Q Consensus 296 ~~~~~~~------------------~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~ 354 (469)
.....+. + ...+.++++...+. .+.+++..++..++.+++.+.|++. |+++..+
T Consensus 326 ~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~ 400 (475)
T 3k40_A 326 NVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVADSRFELAAE 400 (475)
T ss_dssp -----------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC
T ss_pred cCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 1110000 0 01233444444442 3345677778888889999999988 8888766
Q ss_pred CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhc
Q 043923 355 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN--MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 355 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~--~~~e~i~~~l~~L~~~l~~~~ 432 (469)
....++++.++.. .....++.+++.++.++.+.|+..+ +..++|++++. .+++++++++++|++++++..
T Consensus 401 ~~~~iv~f~~~~~-----~~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 401 INMGLVCFRLKGS-----NERNEALLKRINGRGHIHLVPAKIK---DVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp CBTTEEEEEESSC-----HHHHHHHHHHHHHHTSCBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCc-----hHHHHHHHHHHHhCCcEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5556777777531 1223467778776645555554433 25689999875 378999999999999988764
Q ss_pred c
Q 043923 433 T 433 (469)
Q Consensus 433 ~ 433 (469)
+
T Consensus 473 ~ 473 (475)
T 3k40_A 473 Q 473 (475)
T ss_dssp T
T ss_pred c
Confidence 3
No 215
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=1.1e-21 Score=198.75 Aligned_cols=281 Identities=15% Similarity=0.156 Sum_probs=185.6
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~v 163 (469)
..+|++++|++++ . .+.|++ +++++|+..++.+++++||.|+++.|.|..+...+ ... |++++.+
T Consensus 60 ~~~l~~~la~~~g--------~-~~~v~~-~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 128 (421)
T 2ctz_A 60 VDVLEKRLAALEG--------G-KAALAT-ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRL-GIEVRFT 128 (421)
T ss_dssp HHHHHHHHHHHHT--------C-SEEEEE-SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHT-TCEEEEC
T ss_pred HHHHHHHHHHHhC--------C-CceEEe-cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CCEEEEE
Confidence 5789999999985 2 234544 55599999999999999999999999999877665 455 9999988
Q ss_pred -eccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc-cccccCCC
Q 043923 164 -QCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY-SGTVFSSP 241 (469)
Q Consensus 164 -~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay-~~~~~~~~ 241 (469)
+.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|++| +.. +...
T Consensus 129 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~ 191 (421)
T 2ctz_A 129 SREE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR 191 (421)
T ss_dssp CTTC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC
T ss_pred CCCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC
Confidence 653 78899988864 8999999999999999999 666899999999999999999 522 2221
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecC--HHH----HHHHHH------------------
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSND--DMV----VAAATK------------------ 297 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~--~~~----~~~~~~------------------ 297 (469)
. ... +.++++.|+||.+|.+|.|+|++++.+ ..+ ...+..
T Consensus 192 ---~-~~~------------~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~ 255 (421)
T 2ctz_A 192 ---P-LAW------------GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELA 255 (421)
T ss_dssp ---G-GGG------------TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGH
T ss_pred ---c-ccc------------CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhH
Confidence 1 111 356888999999998999999988742 111 001100
Q ss_pred ---------hcccc-cCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee--c-----------
Q 043923 298 ---------MSSFG-LVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCL--K----------- 353 (469)
Q Consensus 298 ---------~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~----------- 353 (469)
...++ ..+++..+++...++. +..+.++..++.+++.+.|+++ ++... +
T Consensus 256 ~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~ 328 (421)
T 2ctz_A 256 FIVKARVDGLRDQGQALGPFEAWVVLLGMET-------LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRA 328 (421)
T ss_dssp HHHHHHHTHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHcCcch-------HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHH
Confidence 01121 2344443343333332 2334445556778888889887 56543 2
Q ss_pred -----CCceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCC---------------------CCCCeEEE
Q 043923 354 -----SNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHC---------------------TEPGWFRV 407 (469)
Q Consensus 354 -----~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~---------------------~~~~~iRi 407 (469)
...|..+.+.+++.. .....++.. ++..++.+..|..... ..++.+|+
T Consensus 329 ~~~~~~~~g~ivsf~l~~~~-----~~~~~~~~~-l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRl 402 (421)
T 2ctz_A 329 QKYFKGKPGAVLTFGLKGGY-----EAAKRFISR-LKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRL 402 (421)
T ss_dssp HHHHTTCCCSEEEEEETTHH-----HHHHHHHHT-CSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEE
T ss_pred HHhccCCCceEEEEEeCCCH-----HHHHHHHHh-CCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEE
Confidence 122456667776310 111122222 2233445555522110 12478999
Q ss_pred EeecCCHHHHHHHHHHHHHHH
Q 043923 408 CFANMSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 408 ~~~~~~~e~i~~~l~~L~~~l 428 (469)
|++. ++++.+++.|++++
T Consensus 403 S~g~---e~~~~li~~l~~al 420 (421)
T 2ctz_A 403 SVGL---EHVEDLKAELKEAL 420 (421)
T ss_dssp ECCS---SCHHHHHHHHHHHT
T ss_pred EeCC---CCHHHHHHHHHHHh
Confidence 9974 67888888888875
No 216
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.89 E-value=5.4e-22 Score=200.15 Aligned_cols=255 Identities=14% Similarity=0.120 Sum_probs=177.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChHH------
Q 043923 81 LFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL---TAGATSANETLMFCLAEPGEAFLLPT-PYYPGFDR------ 150 (469)
Q Consensus 81 ~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~~------ 150 (469)
.|+.. |..+|++.+|++++ .+..++ ++|+++|+..++.+++++||+|++++ |.|..+..
T Consensus 69 ~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 69 GYGDI-GRDSLDAVYARVFN----------TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSC
T ss_pred CCCHH-HHHHHHHHHHHHhC----------CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccc
Confidence 45544 67889999999986 233355 78889999999999999999999999 99988763
Q ss_pred -----HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec----CCCCCCCCCCHHHHHHHHHHHH
Q 043923 151 -----DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN----PSNPLGTTMSRNELNLLVNIIT 221 (469)
Q Consensus 151 -----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~----P~NPtG~~~s~e~l~~l~~~~~ 221 (469)
.+... |++++.++.++ ++.+|++++++++++ .+++++|++++ |+||||.+ .++++|+++|+
T Consensus 138 ~~~~~~l~~~-G~~~~~v~~~~--~g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~ 207 (427)
T 3i16_A 138 NSNMGSLKEF-GINYKQVDLKE--DGKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVK 207 (427)
T ss_dssp CCSSCCTGGG-TCEEEECCCCT--TSSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred cchHHHHHHc-CCEEEEecCcc--CCCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHH
Confidence 34455 99999999864 346899999999872 12899999999 99999866 66888999999
Q ss_pred h--cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH-
Q 043923 222 E--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK- 297 (469)
Q Consensus 222 ~--~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~- 297 (469)
+ +|+++|+|++|+.+.+...+ . ..+.+++++|+||++|.+| .+.||++++++ +.+.+..
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~p----~------------~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~-li~~l~~~ 270 (427)
T 3i16_A 208 NIRKDIICFVDNCYGEFMDTKEP----T------------DVGADLIAGSLIKNIGGGIAPTGGYLAGTKD-CIEKTSYR 270 (427)
T ss_dssp HHCTTSEEEEECTTTTTSSSSCG----G------------GGTCSEEEEETTSGGGTTTCCSCEEEEECHH-HHHHHHHH
T ss_pred HhCCCCEEEEECCCccccccCCc----c------------ccCCeEEEecCcccCCCCCCceEEEEEECHH-HHHHHHHh
Confidence 9 99999999999875433221 1 1145688999999998555 56799999654 4444433
Q ss_pred hcc--ccc-CcH-HHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecccccc
Q 043923 298 MSS--FGL-VSS-QTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLR 369 (469)
Q Consensus 298 ~~~--~~~-~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g----~~~~v~~~~~~~ 369 (469)
... .+. .++ +. ++..+++. ...+..+.++..++...+.+.|+++|++|.|..+. ..+.+.+.+.
T Consensus 271 ~~~~~~g~~~~~~~~--~a~~~l~g----l~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~~-- 342 (427)
T 3i16_A 271 LTVPGIGGECGSTFG--VVRSMYQG----LFLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDK-- 342 (427)
T ss_dssp HSCTTTGGGCCCCTT--CHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSSH--
T ss_pred cccCccCccCCccHH--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECCH--
Confidence 221 111 111 11 11122221 12245667778888899999999999988665332 2566666531
Q ss_pred cCChhHHHHHHHHHHH
Q 043923 370 SNTFEAEMELWKKIVY 385 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~ 385 (469)
+....+++.+..
T Consensus 343 ----~~~~~f~~~l~~ 354 (427)
T 3i16_A 343 ----DKLIEFCKGIQT 354 (427)
T ss_dssp ----HHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHhh
Confidence 333456665543
No 217
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.89 E-value=2.4e-21 Score=194.23 Aligned_cols=320 Identities=12% Similarity=0.080 Sum_probs=201.4
Q ss_pred CeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeC
Q 043923 39 GIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTA 118 (469)
Q Consensus 39 ~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~ 118 (469)
++|++..+.+.+++..+. ++.+. +.. ..|.+..+..++++++|++++ . +++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~-a~~~~-------------~~~-~~~~~~~~~~~l~~~la~~~~--------~--~~~i~~~ 56 (390)
T 3b8x_A 2 HMINYPLASSTWDDLEYK-AIQSV-------------LDS-KMFTMGEYVKQYETQFAKTFG--------S--KYAVMVS 56 (390)
T ss_dssp ---CBCSCCCCCCHHHHH-HHHHH-------------HHH-TCCSSCHHHHHHHHHHHHHHT--------C--SEEEEES
T ss_pred CceeccCCCCCCCHHHHH-HHHHH-------------HHc-CCCCCChHHHHHHHHHHHHHC--------C--CcEEEEC
Confidence 355555555555655444 33331 111 235556678999999999986 2 2567777
Q ss_pred ChHHHHHHHHHHh-------cCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 119 GATSANETLMFCL-------AEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 119 G~~~al~~~~~~l-------~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
++++|+..++.++ .++||.|+++.|+|..+...+... |++++.++++++ ++.+|++++++++++ +
T Consensus 57 sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~ 128 (390)
T 3b8x_A 57 SGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQY-GLRVKFVDIDIN-TLNIDIESLKEAVTD------S 128 (390)
T ss_dssp CHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHT-TCEEEEECBCTT-TCSBCHHHHHHHCCT------T
T ss_pred CHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEecCcc-ccCcCHHHHHHHhCc------C
Confidence 7788999999998 789999999999999999888877 999999998753 478999999998864 7
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCc
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLS 271 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~S 271 (469)
+++|+++| ++|...+ +++|.++|++||+++|+|++|+....... ..+ .. ..+...+....+
T Consensus 129 ~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~-g~-------~~~~~~~s~~~~ 189 (390)
T 3b8x_A 129 TKAILTVN---LLGNPNN---FDEINKIIGGRDIILLEDNCESMGATFNN-----KCA-GT-------FGLMGTFSSFYS 189 (390)
T ss_dssp EEEEEEEC---GGGCCCC---HHHHHHHHTTSCCEEEEECTTCTTCEETT-----EET-TS-------SSSEEEEECCTT
T ss_pred CeEEEEEC---CccChhh---HHHHHHHHHHcCCEEEEECcCcccCEECC-----ccc-cc-------ccceEEEEccCC
Confidence 89988875 4555444 66789999999999999999983211111 011 00 011112222335
Q ss_pred cccCCCcceEEEEEecCHHHHHHHHHhcccc-----------------------------c----CcHHHHHHHHHHhcC
Q 043923 272 KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-----------------------------L----VSSQTQYLLSALLSD 318 (469)
Q Consensus 272 K~~g~~GlRiG~li~~~~~~~~~~~~~~~~~-----------------------------~----~s~~~q~~~~~~l~~ 318 (469)
|.++ +|. .|+++++++.+.+.+......+ . .+.+...++...+
T Consensus 190 k~~~-~g~-gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-- 265 (390)
T 3b8x_A 190 NHIA-TME-GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-- 265 (390)
T ss_dssp SSSC-SSS-CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH--
T ss_pred CCCc-cCC-ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH--
Confidence 6654 343 3999997655544333221110 0 2333333333322
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC--CceE-EEEEecccccccCChhHHHHHHHHHHHhCCeEEeC-
Q 043923 319 KKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKS--NAGL-FCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISP- 393 (469)
Q Consensus 319 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~--~~g~-~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~p- 393 (469)
+++++..++.++.++++.+.|+++ ++++..+ .+++ .+++.++.... .+..++.+.| .++||.+++
T Consensus 266 -----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L-~~~gI~v~~~ 335 (390)
T 3b8x_A 266 -----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSG----VIRKQLVENL-NSAGIECRPI 335 (390)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSC----CCHHHHHHHH-HHTTBCCBCS
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCc----ccHHHHHHHH-HHCCCCeeee
Confidence 235566777778888899999887 6666543 2333 24555552100 1123455555 467999986
Q ss_pred --CCCCCC-C--C-----------------CCeEEEEeec-CCHHHHHHHHHHH
Q 043923 394 --GSSCHC-T--E-----------------PGWFRVCFAN-MSEDTLKLSMQRL 424 (469)
Q Consensus 394 --g~~f~~-~--~-----------------~~~iRi~~~~-~~~e~i~~~l~~L 424 (469)
|+.+.. . . .+.+||++.. +++++++++++.|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 336 VTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp TTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred cCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 322111 0 0 1359999976 5999999998876
No 218
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.89 E-value=6e-22 Score=199.10 Aligned_cols=254 Identities=15% Similarity=0.115 Sum_probs=177.5
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChHH-----
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL---TAGATSANETLMFCLAEPGEAFLLPT-PYYPGFDR----- 150 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~~----- 150 (469)
..|+.. +..+|++.+|++++ .+..++ ++|+++|+..++.+++++||.|+++. |.|..+..
T Consensus 54 ~~y~~~-~~~~Le~~lA~l~g----------~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~ 122 (409)
T 3jzl_A 54 YGYDDE-GRDTLERVYATVFK----------TEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIR 122 (409)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSS
T ss_pred CCCChh-HHHHHHHHHHHHhC----------CCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcc
Confidence 346554 57889999999885 334455 88999999999999999999999998 99998874
Q ss_pred -----HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec----CCCCCCCCCCHHHHHHHHHHHH
Q 043923 151 -----DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN----PSNPLGTTMSRNELNLLVNIIT 221 (469)
Q Consensus 151 -----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~----P~NPtG~~~s~e~l~~l~~~~~ 221 (469)
.++.. |++++.++.++ ++.+|++++++++++ ++++|++++ |+||||.+ .++++|+++|+
T Consensus 123 g~~~~~l~~~-G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~ 190 (409)
T 3jzl_A 123 KQGQGSLKDF-HIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVK 190 (409)
T ss_dssp SSSSSCTGGG-TCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHH
T ss_pred cchhhHHHHc-CCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHH
Confidence 33455 99999999864 467899999998864 899999999 99999876 46778999999
Q ss_pred h--cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHHh
Q 043923 222 E--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKM 298 (469)
Q Consensus 222 ~--~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~ 298 (469)
+ ||+++|+|++|+.+++...+ . ..+.+++++|+||.+|.+| .+.||++++++.+.......
T Consensus 191 ~~~~~~~livD~a~~~~~~~~~p----~------------~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~ 254 (409)
T 3jzl_A 191 NINPEVIVFVDNCYGEFVEYQEP----P------------EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRL 254 (409)
T ss_dssp HHCTTCEEEEECTTCTTTSSCCS----G------------GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHH
T ss_pred hhCCCCEEEEeCCcccccccCCc----c------------ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHh
Confidence 9 99999999999875433221 1 1145688999999998555 44699999644443333322
Q ss_pred cc--cc--cCcHHH-HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecccccc
Q 043923 299 SS--FG--LVSSQT-QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHLLR 369 (469)
Q Consensus 299 ~~--~~--~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g----~~~~v~~~~~~~ 369 (469)
.. .+ ..+.+. ..++...+ .....++++..++..++.+.|+++|+++.+..+. ..+.+.+++.
T Consensus 255 ~~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~~-- 325 (409)
T 3jzl_A 255 TTPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNK-- 325 (409)
T ss_dssp SCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSCH--
T ss_pred ccccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCCH--
Confidence 21 11 111111 22222222 2245566777888899999999999988654321 2555666531
Q ss_pred cCChhHHHHHHHHHHH
Q 043923 370 SNTFEAEMELWKKIVY 385 (469)
Q Consensus 370 ~~~~~~~~~l~~~ll~ 385 (469)
+....+++.+..
T Consensus 326 ----~~~~~~~~~L~~ 337 (409)
T 3jzl_A 326 ----EKMVAFAQAIQA 337 (409)
T ss_dssp ----HHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHh
Confidence 334456666543
No 219
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.88 E-value=1.3e-21 Score=199.22 Aligned_cols=289 Identities=14% Similarity=0.139 Sum_probs=181.5
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHH-hcCCCCEEEEccCCCcChHHHHh----hhCCCEEE
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFC-LAEPGEAFLLPTPYYPGFDRDLK----WRTGVEIV 161 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~-l~~~gd~Vl~~~P~y~~~~~~~~----~~~g~~~~ 161 (469)
|..++.+++.+.+.+.+| ++++++++++|++.++..+..+ ..++||+|+++.|+|+.+...+. .. |++++
T Consensus 105 g~~~~~~~~~~~la~~~g----~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~-G~~v~ 179 (438)
T 1wyu_A 105 GVLQATFEYQTMIAELAG----LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAV-GAKLL 179 (438)
T ss_dssp HHHHHHHHHHHHHHHHHT----SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHT-TCEEE
T ss_pred hHHHHHHHHHHHHHHHhC----CCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHC-CCEEE
Confidence 444444444444444433 5677899999999443333333 24789999999999998876553 35 99999
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc-ccccccCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEI-YSGTVFSS 240 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Dea-y~~~~~~~ 240 (469)
.++.+ ++.+|+++ ++ +++++|++++| ||||.+.+ +++|+++|+++|+++|+|.. .+ ++.
T Consensus 180 ~v~~~---~~~~d~~~----i~------~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~g~ 239 (438)
T 1wyu_A 180 TLPLE---GGRTPLPE----VG------EEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---LGV 239 (438)
T ss_dssp EECCB---TTBCCCCC----CC------TTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---GGT
T ss_pred EEcCc---CCccCHHH----hC------CCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---ccC
Confidence 99873 24567665 33 27999999999 99999987 55688899999999996632 21 221
Q ss_pred CCccchhhhhhccccccCCcCCeEEEEccCcccc----CCCcceEEEEEecCHHHHHHH---------------------
Q 043923 241 PGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDL----GLPGFRVGAIYSNDDMVVAAA--------------------- 295 (469)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~----g~~GlRiG~li~~~~~~~~~~--------------------- 295 (469)
.. ....+ +..+++.| +|.| ++.|.++||++++++.+....
T Consensus 240 ~~--~~~~~------------g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~ 304 (438)
T 1wyu_A 240 LK--PPGAY------------GADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQ 304 (438)
T ss_dssp BC--CHHHH------------TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCG
T ss_pred cC--CCccC------------CCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeecc
Confidence 11 11112 23355555 5654 356779999999655332210
Q ss_pred ------HHhcccccC---cHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCceEEEEEecc
Q 043923 296 ------TKMSSFGLV---SSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-GISCLKSNAGLFCWVDMR 365 (469)
Q Consensus 296 ------~~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~~~g~~~~v~~~ 365 (469)
+.......+ +.+....+...+.... ...+++..+++.++++++.+.|+++ |+++..+.. +|.++.+.
T Consensus 305 ~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~ 381 (438)
T 1wyu_A 305 AREQYIRRAKAKSNITTNAQLTALMGAMYLAALG--PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP-FFNEFALA 381 (438)
T ss_dssp GGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS-BCSEEEEE
T ss_pred ccccccchhcccCCccchHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC-eEEEEEEe
Confidence 000111111 1222211111122111 2336677888888999999999998 898876533 44333332
Q ss_pred cccccCChhHHHHHHHHHHHhCCeEE--eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 043923 366 HLLRSNTFEAEMELWKKIVYDVKLNI--SPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFV 428 (469)
Q Consensus 366 ~~~~~~~~~~~~~l~~~ll~~~GI~v--~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l 428 (469)
.. .+..+++++|+ ++||.+ .++..|. ++++|++++. .+++++++++++|++++
T Consensus 382 ~~------~~~~~~~~~L~-~~gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 382 LP------KDPEAVRRALA-ERGFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CS------SCHHHHHHHHH-HTTCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CC------CCHHHHHHHHH-HCCceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 11 12335677776 459999 7777664 6799999985 38999999999998764
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=1.4e-21 Score=197.25 Aligned_cols=254 Identities=16% Similarity=0.111 Sum_probs=176.2
Q ss_pred ccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChHH-----
Q 043923 80 ALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVL---TAGATSANETLMFCLAEPGEAFLLPT-PYYPGFDR----- 150 (469)
Q Consensus 80 ~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~~----- 150 (469)
..|+.. |..+|++.+|++++ .+..++ ++|+++|+..++.++++|||+|++++ |.|..+..
T Consensus 69 y~Y~~~-g~~~Le~~lA~l~g----------~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~ 137 (427)
T 3hvy_A 69 YGYNDI-GRDSLDRVYANIFN----------TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMD 137 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCC
T ss_pred CCCCch-hHHHHHHHHHHHhC----------CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccc
Confidence 345554 67889999999885 344455 78889999999999999999999999 99988763
Q ss_pred ------HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec----CCCCCCCCCCHHHHHHHHHHH
Q 043923 151 ------DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN----PSNPLGTTMSRNELNLLVNII 220 (469)
Q Consensus 151 ------~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~----P~NPtG~~~s~e~l~~l~~~~ 220 (469)
.++.. |++++.++.+ ++.+|++++++++++ .+++++|++++ |+||||.+ .++++|+++|
T Consensus 138 ~~~~~~~l~~~-G~~~~~v~~~---~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia 206 (427)
T 3hvy_A 138 DSKKVGSLREY-GVKYKMVDLK---DGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSI 206 (427)
T ss_dssp TTCCSCCTGGG-TCEEEECCCB---TTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHH
T ss_pred cchhhhHHHHc-CCEEEEecCC---CCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccH---HHHHHHHHHH
Confidence 34445 9999999872 457899999999873 12899999999 99999866 5688899999
Q ss_pred Hh--cCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH
Q 043923 221 TE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK 297 (469)
Q Consensus 221 ~~--~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~ 297 (469)
++ +|+++|+|++|+.+.+...+ . ..+.+++++|+||++|.+| .+.||++++++ +.+.+..
T Consensus 207 ~~~~~g~~livD~a~~~~~~~~~p----~------------~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~-li~~l~~ 269 (427)
T 3hvy_A 207 REVNENVIVFVDNCYGEFVEEKEP----T------------DVGADIIAGSLIKNIGGGIATTGGYIAGKEE-YVTQATF 269 (427)
T ss_dssp HHHCSSSEEEEECTTCTTTSSSCG----G------------GGTCSEEEEETTSGGGTTTCCSCEEEEECHH-HHHHHHH
T ss_pred HHhCCCCEEEEECCccccccCCCC----c------------ccCCeEEEECCcccccccccceEEEEEECHH-HHHHHHH
Confidence 99 89999999999865433221 1 1145688999999998544 45699998544 4444433
Q ss_pred h-cc--ccc-CcH-HH-HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCce----EEEEEecccc
Q 043923 298 M-SS--FGL-VSS-QT-QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLKSNAG----LFCWVDMRHL 367 (469)
Q Consensus 298 ~-~~--~~~-~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~~~~g----~~~~v~~~~~ 367 (469)
. .. .+. .++ +. ..++...+ .....+.++..++..++.+.|+++|+++.+..+. ..+.+.+.+.
T Consensus 270 ~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~~ 342 (427)
T 3hvy_A 270 RVTVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFNDE 342 (427)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSSH
T ss_pred HhhcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCCH
Confidence 2 21 111 111 22 22222222 1234566677888899999999999988665332 2666766531
Q ss_pred cccCChhHHHHHHHHHHH
Q 043923 368 LRSNTFEAEMELWKKIVY 385 (469)
Q Consensus 368 ~~~~~~~~~~~l~~~ll~ 385 (469)
+....+++.+..
T Consensus 343 ------~~~~~f~~~l~~ 354 (427)
T 3hvy_A 343 ------KKLIDFIKGIQT 354 (427)
T ss_dssp ------HHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhcc
Confidence 333455555543
No 221
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.88 E-value=2.7e-21 Score=198.80 Aligned_cols=345 Identities=15% Similarity=0.152 Sum_probs=210.7
Q ss_pred CCCeeeeeccccc--c--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAENQ--L--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+... + .++.+.+++.+..... .+.....|+. ....+|++++++.+.+..+ ...+
T Consensus 62 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~--------~~~~~~~~~~-~~~~~l~~~la~~l~~~~~----~~~~ 128 (472)
T 1ohv_A 62 GNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVS--------TFINRPALGI-LPPENFVEKLRESLLSVAP----KGMS 128 (472)
T ss_dssp SCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHH--------HHHCCCCTTT-SCBTTHHHHHHHTGGGGCC----TTCC
T ss_pred CCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhc--------cccccccccc-ccHHHHHHHHHHHHHHhCC----CCcC
Confidence 3468999876432 3 3566777776631100 0001112432 2457899999997765533 3578
Q ss_pred cEEEeCChHHHHHHHHHHhc--------C-----------------CC---CEEEEccCCCcChHHHHhhhCCCE-----
Q 043923 113 KIVLTAGATSANETLMFCLA--------E-----------------PG---EAFLLPTPYYPGFDRDLKWRTGVE----- 159 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--------~-----------------~g---d~Vl~~~P~y~~~~~~~~~~~g~~----- 159 (469)
.|++++|+++|+..+++.+. . +| +.|++.++.|+++...+....|..
T Consensus 129 ~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~ 208 (472)
T 1ohv_A 129 QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKI 208 (472)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHT
T ss_pred EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCcccccc
Confidence 99999999999999998873 1 45 899999999988765543222321
Q ss_pred --------EEEeeccC---CCC--c-----ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHH
Q 043923 160 --------IVPIQCTS---LNG--F-----QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNII 220 (469)
Q Consensus 160 --------~~~v~~~~---~~~--~-----~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~ 220 (469)
.+++|... ... + ..|+++|+++|++....+.++++|++...+|++|. ..+.+.+++|.++|
T Consensus 209 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~ 288 (472)
T 1ohv_A 209 DIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIS 288 (472)
T ss_dssp TSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHH
Confidence 12232110 000 1 12578888888653221225777666655788996 56899999999999
Q ss_pred HhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcc
Q 043923 221 TEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS 300 (469)
Q Consensus 221 ~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~ 300 (469)
++||+++|+||+|.++.+.+. ......+ . . ...+-+.||||++ +.| ||++ ++. +.. ......
T Consensus 289 ~~~g~lli~DEv~~g~g~~g~-~~~~~~~-g--------v-~~~~Di~t~sK~~-l~G---G~~~-~~~-~~~-~~~~~~ 350 (472)
T 1ohv_A 289 RKHGCAFLVDEVQTGGGSTGK-FWAHEHW-G--------L-DDPADVMTFSKKM-MTG---GFFH-KEE-FRP-NAPYRI 350 (472)
T ss_dssp HHTTCEEEEECTTTTTTTTSS-SSGGGGG-C--------C-SSCCSEEEECGGG-SSE---EEEE-CGG-GSC-SSSSSS
T ss_pred HHhCCEEEEeCcccCCCCCCC-chhcccc-C--------C-CCCCCEEEEcccc-ccC---CccC-chh-hcc-cccccc
Confidence 999999999999987433222 1121111 0 1 0001134899995 345 7766 333 321 111111
Q ss_pred c--ccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--C----CceecCCceEEEEEecccccccCC
Q 043923 301 F--GLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA--G----ISCLKSNAGLFCWVDMRHLLRSNT 372 (469)
Q Consensus 301 ~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--g----~~v~~~~~g~~~~v~~~~~~~~~~ 372 (469)
. ...+++++.++.++|+... + +...++++++++++.+.|+++ + +....+. |.+++++++..
T Consensus 351 ~~T~~~~~~~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~----- 419 (472)
T 1ohv_A 351 FNTWLGDPSKNLLLAEVINIIK---R--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE----- 419 (472)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH-----
T ss_pred cCccCccHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh-----
Confidence 1 2357778777776664211 1 123455566666666666654 1 3323444 46677777631
Q ss_pred hhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 373 FEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 373 ~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.....++..++ ++||.+.|+. .+++|++++. .+++++++++++|++++++.
T Consensus 420 -~~~~~~~~~l~-~~Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 420 -SIRNKLISIAR-NKGVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp -HHHHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -hHHHHHHHHHH-HCCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 22346777777 5699999852 4689998875 49999999999999998753
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.87 E-value=2.3e-21 Score=207.27 Aligned_cols=312 Identities=13% Similarity=0.038 Sum_probs=196.0
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH-HhhhCCCEEEEee
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD-LKWRTGVEIVPIQ 164 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~-~~~~~g~~~~~v~ 164 (469)
.-+.++++.+|++++ . ...+++++|+++++..++.+++++||.|+++.|+|.++... +... |++++.++
T Consensus 173 ~~i~e~e~~lA~~~g--------a-e~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~-Ga~~v~v~ 242 (730)
T 1c4k_A 173 GPAVAAEKHAARVYN--------A-DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMA-GGRPVYLQ 242 (730)
T ss_dssp THHHHHHHHHHHHTT--------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTT-CCEEEEEC
T ss_pred HHHHHHHHHHHHHHC--------C-CcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHC-CCEEEEEe
Confidence 346889999999886 2 34588999999999999999999999999999999988887 6666 99999888
Q ss_pred ccCCCCcc----cCHHHH-----HHHHHHH-Hhc--CCce-eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 165 CTSLNGFQ----ITETAI-----EEAYQLA-QKR--HLKV-KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 165 ~~~~~~~~----~d~~~l-----~~~i~~~-~~~--~~~~-~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
.+.+ .|. +|++++ ++++++. ... .+++ +++++++| ||+|.+.+ +++|+++|++||+++|+||
T Consensus 243 ~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDe 317 (730)
T 1c4k_A 243 TNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDS 317 (730)
T ss_dssp EEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred CCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEc
Confidence 6532 333 688888 6666431 000 1112 88999999 58999987 5568999999999999999
Q ss_pred ccccc-ccCCCCc-cchhhhhhccccccCCcCCeEEEEccCccccCCCcceE-EEEEecCHHH--------HHHHHH---
Q 043923 232 IYSGT-VFSSPGF-VSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRV-GAIYSNDDMV--------VAAATK--- 297 (469)
Q Consensus 232 ay~~~-~~~~~~~-~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRi-G~li~~~~~~--------~~~~~~--- 297 (469)
+|+.. .|..... .+.... ... +. +.++++++.|+||++ +|++. |++++++..+ ...+..
T Consensus 318 Ah~~~~~f~~~~~g~~~l~~-~~~---g~-D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~ 390 (730)
T 1c4k_A 318 AWVGYEQFIPMMRNSSPLLI-DDL---GP-EDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFN 390 (730)
T ss_dssp TTCCGGGSSGGGGGGCTTSC-CCC---CT-TSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHH
T ss_pred ccccccccCcccCCcCcccc-ccc---CC-CCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHH
Confidence 99743 2332100 011111 000 00 234679999999986 55554 5554443322 111111
Q ss_pred hcccccCcHHHHHHH---HHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHh--cCCceecCC-----------------
Q 043923 298 MSSFGLVSSQTQYLL---SALLSDKKFTQNYISENKKRLKQRHRKLVSGLEK--AGISCLKSN----------------- 355 (469)
Q Consensus 298 ~~~~~~~s~~~q~~~---~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~--~g~~v~~~~----------------- 355 (469)
....++++.+...++ ...+... ...+..+++.++.+.+++.|++ .|+++..+.
T Consensus 391 ~~~stsp~~~~iaal~aA~~~l~~~-----~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~ 465 (730)
T 1c4k_A 391 LFMSTSPFYPMYAALDVNAAMQEGE-----AGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMAN 465 (730)
T ss_dssp HHSCSSCCHHHHHHHHHHHHHHSHH-----HHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTT
T ss_pred HhCCCCCcHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccc
Confidence 111122333333332 2233221 1233455666677778888887 377765432
Q ss_pred --------------------ce-EE-----EEEeccccc------ccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCC
Q 043923 356 --------------------AG-LF-----CWVDMRHLL------RSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPG 403 (469)
Q Consensus 356 --------------------~g-~~-----~~v~~~~~~------~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~ 403 (469)
.+ ++ +.+.+++.. .... ....++.+.| +++||.+... +.+
T Consensus 466 ~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g-~~~~~l~~~L-~e~GI~v~~~------~~~ 537 (730)
T 1c4k_A 466 NIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFG-VPATIVANYL-RDHGIIPEKS------DLN 537 (730)
T ss_dssp CGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSC-CCHHHHHHHH-HHTTCCCSEE------CSS
T ss_pred cchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccC-CCHHHHHHHH-HHCCcEEEEC------CCC
Confidence 11 12 455554210 0001 1223455555 4569988653 245
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 404 WFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 404 ~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
.+|++++. .++++++.++++|+++.+.+.
T Consensus 538 ~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 538 SILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 79998875 489999999999999987664
No 223
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.78 E-value=8.1e-24 Score=215.63 Aligned_cols=333 Identities=14% Similarity=0.080 Sum_probs=205.9
Q ss_pred CCCeeeeeccccc--c--ChHHHHHHHhcCCCccccccCCcccccccccCCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC
Q 043923 37 PTGIIQMGLAENQ--L--SFDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVEFMSEIRGNKVTFDTS 112 (469)
Q Consensus 37 ~~~~i~L~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~ 112 (469)
...+||+..+..+ + .++.+.+++.+.... .....|+. ....+|.+.|++++. ..+
T Consensus 99 G~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~-----------~~~~~~~~-~~~~~Lae~L~~~~p---------~~~ 157 (465)
T 2yky_A 99 GHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV-----------GLNLSTQT-ENEALFAEAVCDRFP---------SID 157 (465)
Confidence 3458999887653 3 246666666553211 01123432 344677777777662 357
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhh---hCCC--EEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKW---RTGV--EIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~---~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
.+++++|+++|+..+++.+. ..++.|++.+++|.++...+.. ..|+ .++.+|. .|++++++++++.
T Consensus 158 ~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~ 230 (465)
T 2yky_A 158 LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRH 230 (465)
Confidence 89999999999999998753 3458999999999876543320 1133 3333332 2678888888642
Q ss_pred HhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeE
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRV 264 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 264 (469)
+.++++|++...++++|.+ .+.+.+++|.++|++||+++|+||+|. +.. +. ... .+. .+..
T Consensus 231 ---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a-~~~-----------~gv~ 292 (465)
T 2yky_A 231 ---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGA-QEM-----------LGIS 292 (465)
Confidence 1267776665435669965 468889999999999999999999998 522 11 111 111 1222
Q ss_pred EEEccCccccCCCcceEEEEEecCHHHHHHHHH-------hcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 043923 265 HIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK-------MSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRH 337 (469)
Q Consensus 265 i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 337 (469)
.-+.||||++| .|+|+||++++++.+ +.+.. ....+..+++++.++.+.|+...- +...+++.++.
T Consensus 293 pDi~t~sK~lg-~G~piG~v~~~~~i~-~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~-----~~~~~~~~~~~ 365 (465)
T 2yky_A 293 ADLTTLGKYIG-GGMSFGAFGGRRDLM-ERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT-----RQAASDLSASG 365 (465)
Confidence 23458999999 699999999965543 33332 112223677788777776653211 12233444444
Q ss_pred HHHHHHHHhc----CCceecCCceEEEEEeccc-cccc------CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEE
Q 043923 338 RKLVSGLEKA----GISCLKSNAGLFCWVDMRH-LLRS------NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFR 406 (469)
Q Consensus 338 ~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~-~~~~------~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iR 406 (469)
+++.+.|+++ ++....+..|.++|+.+++ .... .+......++..++ ++||.+.|+. |. .
T Consensus 366 ~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~------~- 436 (465)
T 2yky_A 366 DRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MY------A- 436 (465)
Confidence 4455544443 4333334456888888764 1100 00011335667776 5699999876 32 1
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHhhc
Q 043923 407 VCFANMSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 407 i~~~~~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+++. ++++++++++++|++++++..
T Consensus 437 ~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 437 LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 5554 589999999999999987653
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.86 E-value=1.1e-20 Score=191.34 Aligned_cols=233 Identities=16% Similarity=0.147 Sum_probs=161.6
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChHHHH----------hhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPT-PYYPGFDRDL----------KWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
+++ |+++|+..++.+++++||.|+++. |.|..+...+ +.. |++++.++.++ ++.+|+++++++++
T Consensus 88 ~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~-G~~~~~v~~~~--~~~~d~e~l~~~l~ 163 (431)
T 3ht4_A 88 QII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY-NIGYNAVPLTE--GGLVDFEAVAAAIH 163 (431)
T ss_dssp TSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG-TCEEEECCBCT--TSSBCHHHHHHHCC
T ss_pred eee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHc-CCEEEEeCCCC--CCCcCHHHHHhhcC
Confidence 355 668999999999999999999998 9999988654 335 99999999874 46789999999886
Q ss_pred HHHhcCCceeEEEEe-cCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccccccccCCCCccchhhhhhccccccCCc
Q 043923 184 LAQKRHLKVKGVLVT-NPSNPLGTTMSRNELNLLVNIITE--KNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQV 260 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~-~P~NPtG~~~s~e~l~~l~~~~~~--~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~ 260 (469)
+ ++++|+++ +|+||+|.+++.+++++|+++|++ +|+++|+||+|+.+.+.... ..+
T Consensus 164 ~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~----~~~----------- 222 (431)
T 3ht4_A 164 S------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP----CHV----------- 222 (431)
T ss_dssp T------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG----GGT-----------
T ss_pred C------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc----ccc-----------
Confidence 4 89999999 589999999999999999999999 99999999999976543321 111
Q ss_pred CCeEEEEccCccccCC-CcceEEEEEecCHHHHHHHHHhccc--cc--CcHHH-HHHHHHHhcCchhhHHHHHHHHHHHH
Q 043923 261 WNRVHIVYSLSKDLGL-PGFRVGAIYSNDDMVVAAATKMSSF--GL--VSSQT-QYLLSALLSDKKFTQNYISENKKRLK 334 (469)
Q Consensus 261 ~~~~i~i~S~SK~~g~-~GlRiG~li~~~~~~~~~~~~~~~~--~~--~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~l~ 334 (469)
+..++++|+||++|. .+...||++++++.+.......... +. .+++. ..++...+ .....+.++..
T Consensus 223 -g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~ 294 (431)
T 3ht4_A 223 -GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FLAPHVAGQAL 294 (431)
T ss_dssp -TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HHHHHHHHHHH
T ss_pred -CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hhHHHHHHHHH
Confidence 345889999999652 1133399999654443332222221 11 11111 12222222 12345566777
Q ss_pred HHHHHHHHHHHhcCCceecCCc----eEEEEEecccccccCChhHHHHHHHHHHHh
Q 043923 335 QRHRKLVSGLEKAGISCLKSNA----GLFCWVDMRHLLRSNTFEAEMELWKKIVYD 386 (469)
Q Consensus 335 ~~~~~l~~~L~~~g~~v~~~~~----g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~ 386 (469)
++.+++.+.|+++|+++.+... +..+.+.+++. +....+++.+...
T Consensus 295 ~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~~------~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 295 KGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDK------DRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCCH------HHHHHHHHHHHhc
Confidence 7888899999999988765432 23556666531 2334566665543
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=7.6e-20 Score=197.13 Aligned_cols=308 Identities=10% Similarity=0.027 Sum_probs=193.1
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
-..++++.++++++ . .+.+++++|+++++..++.+++++||.|+++.|+|.++...+... |++++.++.+
T Consensus 206 ~v~~~ee~la~l~G--------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~-G~~~v~v~~~ 275 (755)
T 2vyc_A 206 AFGESEKYAARVFG--------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLT-GAKPVYMVPS 275 (755)
T ss_dssp HHHHHHHHHHHHHT--------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHH-CCEEEEECCC
T ss_pred HHHHHHHHHHHHhC--------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeCC
Confidence 35777888888875 2 356889999999999999999999999999999999998888877 9999999876
Q ss_pred CCCCcc----c-----CHHHHHHHHHHHH----hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 167 SLNGFQ----I-----TETAIEEAYQLAQ----KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 167 ~~~~~~----~-----d~~~l~~~i~~~~----~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
.+ .|. + |++++++++++.. ..+.++++++++|| ||+|.+.+ +++|+++|++||+++++||+|
T Consensus 276 ~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~ 350 (755)
T 2vyc_A 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_dssp BC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTT
T ss_pred CC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcC
Confidence 42 333 4 8999999997521 12234468999999 79999987 556899999999999999999
Q ss_pred cccc-cCCC--Cccchhhhh--hccccccCCcCCeEEEEccCccccCCCcce-EEEEEecCH--HH-----HHHHHHhcc
Q 043923 234 SGTV-FSSP--GFVSIMEIL--KDRNCENTQVWNRVHIVYSLSKDLGLPGFR-VGAIYSNDD--MV-----VAAATKMSS 300 (469)
Q Consensus 234 ~~~~-~~~~--~~~s~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~g~~GlR-iG~li~~~~--~~-----~~~~~~~~~ 300 (469)
+... ++.. +...+ .. .+. ..++++++.|+||++ +|++ .|++++++. .+ .+......
T Consensus 351 ~~~~~~~~~~~~~~~~--~g~~aD~------~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~- 419 (755)
T 2vyc_A 351 YGYARFNPIYADHYAM--RGEPGDH------NGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHA- 419 (755)
T ss_dssp CTTGGGCGGGTTSSSS--CSCCCCC------SSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTS-
T ss_pred chhcccCcccCCcchh--cCCcCCc------cCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhC-
Confidence 7532 3221 11111 11 010 236788999999986 5555 567766443 11 11222221
Q ss_pred cccCcHHHHH---HHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-C---------CceecCC------------
Q 043923 301 FGLVSSQTQY---LLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-G---------ISCLKSN------------ 355 (469)
Q Consensus 301 ~~~~s~~~q~---~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-g---------~~v~~~~------------ 355 (469)
.++++.+... ++...+..... .+++++. .+..+.+++.|+++ + +++..+.
T Consensus 420 s~sp~~~~iaal~aA~~~l~~~gg-~~~~~~~----~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (755)
T 2vyc_A 420 TTSPLYAICASNDVAVSMMDGNSG-LSLTQEV----IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYD 494 (755)
T ss_dssp CSSCCHHHHHHHHHHHHHHSTHHH-HHHHHHH----HHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhH-HHHHHHH----HHHHHHHHHHHHhccccccccccceeeccCchhccccccccccc
Confidence 1223443333 33344443211 3334443 33444444444443 2 3332221
Q ss_pred -------------------------------ce------EEEEEeccccc-cc---CChhHHHHHHHHHHHhCCeEEeCC
Q 043923 356 -------------------------------AG------LFCWVDMRHLL-RS---NTFEAEMELWKKIVYDVKLNISPG 394 (469)
Q Consensus 356 -------------------------------~g------~~~~v~~~~~~-~~---~~~~~~~~l~~~ll~~~GI~v~pg 394 (469)
.| .-+.+.+++.. .. +.-.+..++. ..|+++||.+...
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~-~~L~~~gI~~e~~ 573 (755)
T 2vyc_A 495 FADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVT-AWLGRHGIVPTRT 573 (755)
T ss_dssp GGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHH-HHHHTTTCCCSEE
T ss_pred cccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHH-HHHHHCCCEEeec
Confidence 11 12344454310 00 0001112344 4456789887532
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhc
Q 043923 395 SSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSIT 432 (469)
Q Consensus 395 ~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~ 432 (469)
+.+.+|+.++. .++++++.++++|+++.+.+.
T Consensus 574 ------~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 574 ------TDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp ------CSSEEEEECCTTCCTTTTHHHHHHHHHHHHHHH
T ss_pred ------CCCeEEEEECCCCCHHHHHHHHHHHHHHHHhhh
Confidence 35679999975 499999999999999987653
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=2.6e-18 Score=182.22 Aligned_cols=312 Identities=12% Similarity=0.083 Sum_probs=185.8
Q ss_pred CCCCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 84 DYHGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 84 ~~~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
+..-+.++++.+|++++ ....+++++|++.|+..++.+++++||.|+++.++|.++...+... |++++.+
T Consensus 193 ~~g~i~eaE~~lA~~fG---------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~ls-Ga~pv~v 262 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMS-DVTPIYF 262 (715)
T ss_dssp TBTHHHHHHHHHHHHHT---------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHS-CCEEEEE
T ss_pred CcHHHHHHHHHHHHHhC---------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHc-CCEEEEE
Confidence 33447899999999996 2456778999999999999999999999999999999999988877 9999999
Q ss_pred eccCCCCccc---------CHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 164 QCTSLNGFQI---------TETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 164 ~~~~~~~~~~---------d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
+.+. +.|.+ |++.+++++++... ...++++++++| ||+|.+++.++ |+++|++++ +++||||+
T Consensus 263 ~~~~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~---I~ela~~~~--livDEAH~ 334 (715)
T 3n75_A 263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDF---IKKTLDVKS--IHFDSAWV 334 (715)
T ss_dssp CCCB-CTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHH---HHHHCCCSE--EEEECTTC
T ss_pred eccc-cccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHH---HHHHhCcCc--EEEccccc
Confidence 8764 34554 89999999975210 012348999999 99999998665 666676663 79999998
Q ss_pred ccc-cCCCCccchhhhhhccccccCCcCCe-EEEEccCccccCCCcc-eEEEEEecCHHHHHHHHHhc---ccccCcHHH
Q 043923 235 GTV-FSSPGFVSIMEILKDRNCENTQVWNR-VHIVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATKMS---SFGLVSSQT 308 (469)
Q Consensus 235 ~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~-~i~i~S~SK~~g~~Gl-RiG~li~~~~~~~~~~~~~~---~~~~~s~~~ 308 (469)
... |... ......+... ...+. ++++.|+||+++ |+ ..|++++++......++... ..++++.+.
T Consensus 335 ~~~~f~~~-~~~~~al~~g------~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~ 405 (715)
T 3n75_A 335 PYTNFSPI-YEGKCGMSGG------RVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGI 405 (715)
T ss_dssp TTGGGSGG-GTTSSTTSSS------CCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHH
T ss_pred cccccCCc-cccccccccC------cCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHH
Confidence 643 3321 1111111000 01234 366899999975 43 35888876542222222221 122244444
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----C--CceecCC------------------------ce
Q 043923 309 QYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA-----G--ISCLKSN------------------------AG 357 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----g--~~v~~~~------------------------~g 357 (469)
.+++..+++... ...-.+.++++.+..+++++.|+++ | +++..++ +.
T Consensus 406 ~AsldaA~~~~~--~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~ 483 (715)
T 3n75_A 406 VASTETAAAMMK--GNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEH 483 (715)
T ss_dssp HHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSS
T ss_pred HHHHHHHHHHHH--hhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCc
Confidence 443333321100 0012233445555555566655543 2 2322211 11
Q ss_pred EE-----EEEeccccc-cc----CChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 043923 358 LF-----CWVDMRHLL-RS----NTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKA 426 (469)
Q Consensus 358 ~~-----~~v~~~~~~-~~----~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~ 426 (469)
++ +.+.+++.. .. .. ... ..+.+.|+++||.+--.+ ..++-+-++- .++++++.++++|.+
T Consensus 484 ~~~Dp~Kl~i~~~~~~~~G~~~~~G-i~g-~~~~~~L~~~~I~~E~~d------~~~vl~l~s~g~~~~~~~~L~~aL~~ 555 (715)
T 3n75_A 484 MYLDPIKVTLLTPGMEKDGTMSDFG-IPA-SIVAKYLDEHGIVVEKTG------PYNLLFLFSIGIDKTKALSLLRALTD 555 (715)
T ss_dssp EEECTTEEEEECSCBCTTSCBCSSC-CCH-HHHHHHHHHTTCCCSEEE------TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEEcCCCCCCCccccCC-CcH-HHHHHHHHHCCCEEEecC------CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 11 334443210 00 01 111 234445578899876433 2344444432 388999999999998
Q ss_pred HHHhhc
Q 043923 427 FVDSIT 432 (469)
Q Consensus 427 ~l~~~~ 432 (469)
+-+...
T Consensus 556 ~~~~~~ 561 (715)
T 3n75_A 556 FKRAFD 561 (715)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 766543
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.75 E-value=2e-17 Score=163.79 Aligned_cols=289 Identities=13% Similarity=0.124 Sum_probs=188.8
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCC-CcEEE-eCChHHHHHHHHHHhcCC--CCEEEEccCCCcCh--HHHHhhhCCCEEE
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDT-SKIVL-TAGATSANETLMFCLAEP--GEAFLLPTPYYPGF--DRDLKWRTGVEIV 161 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~-t~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~--~~~~~~~~g~~~~ 161 (469)
+.+.|+.++++++ +++ ++|++ |+|+|+++++++..+..+ ||+|++..-.+.+. ...++.. |..++
T Consensus 60 ~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~-G~~~~ 130 (377)
T 3e77_A 60 INNTENLVRELLA--------VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKF-GTINI 130 (377)
T ss_dssp HHHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTT-SEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHh-CCceE
Confidence 4566777888876 433 56888 589999999999998765 89987766554332 2334445 88877
Q ss_pred EeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 162 PIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 162 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
.++.+. ++..+++.++.+++ +++++|.+++-.|.||.+.|. +|+++|+++++|.+.+ ++..
T Consensus 131 ~~~~~~--~~~~~~~~~~~~i~------~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~---~g~~ 191 (377)
T 3e77_A 131 VHPKLG--SYTKIPDPSTWNLN------PDASYVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSN---FLSK 191 (377)
T ss_dssp CSCCCS--SSCSCCCGGGCCCC------TTCSCEEEESEETTTTEECSS--------CCCCTTCCEEEECTTT---TTSS
T ss_pred EeccCC--CcCCCCChHHhccC------CCccEEEEeCccCchheEchh--------hhccCCCEEEEEcccc---cCCC
Confidence 777753 33355555554443 388999999888899999985 3678999999999997 4433
Q ss_pred CccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHH-------------HHHHHHhcccccCcHHH
Q 043923 242 GFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMV-------------VAAATKMSSFGLVSSQT 308 (469)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~-------------~~~~~~~~~~~~~s~~~ 308 (469)
+ ..+..+ + +++.|..|.+|.+| +|+++..++.+ .........+++++...
T Consensus 192 ~-id~~~~------------~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~ 254 (377)
T 3e77_A 192 P-VDVSKF------------G--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFS 254 (377)
T ss_dssp C-CCGGGC------------S--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHH
T ss_pred C-Cchhhc------------C--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHH
Confidence 2 232222 3 36679999999777 56666643321 11111122244556555
Q ss_pred HHHHHHHhcCchhhHH--HHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CceEEEEEecccccccCChhHHHHHHH
Q 043923 309 QYLLSALLSDKKFTQN--YISENKKRLKQRHRKLVSGLEKA-GISCLKS----NAGLFCWVDMRHLLRSNTFEAEMELWK 381 (469)
Q Consensus 309 q~~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~~----~~g~~~~v~~~~~~~~~~~~~~~~l~~ 381 (469)
.+++.++|+- +.+ -++...++.++..+++.+.|+++ |+.+.+. .++..+.+.+++..... .-+..+..
T Consensus 255 i~~l~~al~~---l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~--~~~~~~l~ 329 (377)
T 3e77_A 255 IYVMGLVLEW---IKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDD--ALEKRFLD 329 (377)
T ss_dssp HHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCH--HHHHHHHH
T ss_pred HHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCch--hHHHHHHH
Confidence 5555555432 122 25777788888889999999988 7764331 23345667776421100 11123445
Q ss_pred HHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 382 KIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 382 ~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.+. ++||.+++|... .+.+|+|+.. .++++++.+++.|++++++.
T Consensus 330 ~l~-~~Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 330 KAL-ELNMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp HHH-HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HCCcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 444 679999988532 3469999976 49999999999999998763
No 228
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.75 E-value=5.1e-17 Score=161.72 Aligned_cols=288 Identities=11% Similarity=0.084 Sum_probs=185.5
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCC-CcEEE-eCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEE
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDT-SKIVL-TAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIV 161 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~-~~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~ 161 (469)
.-+.+.|+.+|++++ ++. ++|++ |+|+|+++++++..++.+||+|++..-.+.+. ...++.. | ++.
T Consensus 72 ~~~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~-G-~v~ 141 (386)
T 3qm2_A 72 QVAEEAEQDFRDLLN--------IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKY-C-APQ 141 (386)
T ss_dssp -CCHHHHHHHHHHHT--------CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTT-S-EEE
T ss_pred HHHHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHh-C-CeE
Confidence 356899999999997 433 46888 69999999999999999999887554433222 2334445 8 888
Q ss_pred Eeecc-CCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 162 PIQCT-SLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 162 ~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
.++.+ .+.++.+++++++.++++ ++++|.+++-.|.||.. .+.+++ . +|+++++|.+.+ ++
T Consensus 142 ~v~~~~~~~G~~~~~~~~~~~l~~------~t~lV~~~h~et~tG~~i~pi~~i---~-----~g~~~~vDa~qs---~g 204 (386)
T 3qm2_A 142 IIDAKITVDGKRAVKPMREWQLSD------NAAYLHYCPNETIDGIAIDETPDF---G-----PEVVVTADFSST---IL 204 (386)
T ss_dssp EEECEEEETTEEEECCGGGCCCCT------TCSCEEECSEETTTTEECCCCCCC---C-----TTCCEEEECTTT---TT
T ss_pred EEecCcccCCCCCCchHHHhhcCC------CCcEEEEECCcCCcCEecCchhhh---c-----CCCEEEEEcccc---cC
Confidence 88876 123433566666665543 78888888888889996 676664 2 799999999987 44
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHH-------------HHHHHhcccccCcH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVV-------------AAATKMSSFGLVSS 306 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~-------------~~~~~~~~~~~~s~ 306 (469)
..+ ..+..+ + +.+.|..|.+|.+| +|++++.+..+. ........+++.+.
T Consensus 205 ~~p-idv~~~------------~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v 267 (386)
T 3qm2_A 205 SAP-LDVSRY------------G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPT 267 (386)
T ss_dssp SSC-CCGGGC------------S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CC
T ss_pred CCC-CCcccc------------C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcH
Confidence 332 332222 3 35579999998666 788877544310 11111112233444
Q ss_pred HHHHHHHHHhcCchhhHHH--HHHHHHHHHHHHHHHHHHHHhcCCcee--cC--CceEEEEEecccccccCChhHHHHHH
Q 043923 307 QTQYLLSALLSDKKFTQNY--ISENKKRLKQRHRKLVSGLEKAGISCL--KS--NAGLFCWVDMRHLLRSNTFEAEMELW 380 (469)
Q Consensus 307 ~~q~~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~--~~--~~g~~~~v~~~~~~~~~~~~~~~~l~ 380 (469)
+...++.++++ ++.+. ++...++.++..+++.+.|+++++... .+ .+...+.+.+++. . .+ .++.
T Consensus 268 ~~i~~l~~Al~---~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~----~-~~-~~~~ 338 (386)
T 3qm2_A 268 FAWYLSGLVFK---WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN----T-LD-KVFL 338 (386)
T ss_dssp SHHHHHHHHHH---HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG----G-GH-HHHH
T ss_pred HHHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc----c-cc-HHHH
Confidence 44444444442 22222 577777888888999999998875211 11 2234566666631 1 11 2444
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.. |+++||.+++|... .+.+|+|+.. .++++++++++.|+++.++.
T Consensus 339 ~~-L~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 339 EE-SFAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp HH-HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 54 56779999887543 2349999976 48999999999999998753
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.74 E-value=1.5e-16 Score=156.93 Aligned_cols=330 Identities=15% Similarity=0.146 Sum_probs=200.3
Q ss_pred CCCeeeeeccccccChHHHHHHHhcCCCccccccCCcccccccccCCC--CCCcHHHHHHHHHHHHhHcCCCCCCC-CCc
Q 043923 37 PTGIIQMGLAENQLSFDLLESWLDRNPDAAGFKRDGQSIFRELALFQD--YHGLPAFKKALVEFMSEIRGNKVTFD-TSK 113 (469)
Q Consensus 37 ~~~~i~L~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~Lr~aia~~l~~~~~~~~~~~-~~~ 113 (469)
+..++.|+-+..+.|+..+........+... .+.+.++..+ ..+ ..-+.+.|+.++++++ ++ +++
T Consensus 3 ~~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~---~~~s~~~~~h-r~~~~~~~~~~~r~~la~ll~--------~~~~~~ 70 (361)
T 3m5u_A 3 AMRKINFSAGPSTLPLEILEQAQKELCDYQG---RGYSIMEISH-RTKVFEEVHFGAQEKAKKLYE--------LNDDYE 70 (361)
T ss_dssp -CCCEECCSSSCCCCHHHHHHHHHTSSSGGG---SSSCGGGSCS-SSHHHHHHHHHHHHHHHHHHT--------CCTTEE
T ss_pred ccceEeecCCCCCCcHHHHHHHHHHHHhccc---CCceeeccCC-CCHHHHHHHHHHHHHHHHHhC--------CCCCce
Confidence 3466788888877777665555443321100 0000000000 000 0224566777888876 43 457
Q ss_pred EEE-eCChHHHHHHHHHHhcCCCCEEEEc-cCCCcC-hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVL-TAGATSANETLMFCLAEPGEAFLLP-TPYYPG-FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~-t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|++ |+|+|+++++++..+. +||++++. .-.|.. ....++.. |+++..++.+..+.+.++++. + |++
T Consensus 71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~-G~~v~~~~~~~~g~~~~~~~~-~--l~~------ 139 (361)
T 3m5u_A 71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQIL-GVNVKTVASSEESNFDHIPRV-E--FSD------ 139 (361)
T ss_dssp EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHT-TCCEEEEEECTTTTSCSCCCC-C--CCT------
T ss_pred EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHc-CCceEEEecccCcCCCcCChh-h--cCC------
Confidence 887 9999999999999998 78865322 222221 22334555 899999998865434344444 3 543
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccC
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSL 270 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~ 270 (469)
++++|.+++..|.||...+. +++ +|+++++|.+.+ ++..+ ..+. +..+++.|.
T Consensus 140 ~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~---~g~~~-id~~--------------~~d~~~~s~ 192 (361)
T 3m5u_A 140 NADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSD---FFSRK-VDFS--------------NIALFYGGV 192 (361)
T ss_dssp TSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGG---TTSSC-CCCT--------------TEEEEEEET
T ss_pred CCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEcccc---cCCCC-CCcc--------------cCCEEEEec
Confidence 78999999888899998762 233 499999999987 44332 2211 234677899
Q ss_pred ccccCCCcceEEEEEecCHHHHHHHH--------------HhcccccCcHHHHHHHHHHhcCchhhHHH--HHHHHHHHH
Q 043923 271 SKDLGLPGFRVGAIYSNDDMVVAAAT--------------KMSSFGLVSSQTQYLLSALLSDKKFTQNY--ISENKKRLK 334 (469)
Q Consensus 271 SK~~g~~GlRiG~li~~~~~~~~~~~--------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~l~ 334 (469)
.|.+|.+| +|+++..++.+..... ....+++++.....++.++++- +.+. ++...++.+
T Consensus 193 ~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~~~gG~~~i~~~~~ 267 (361)
T 3m5u_A 193 QKNAGISG--LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDW---LLNQGGLDKVHEKNS 267 (361)
T ss_dssp TTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHTTTCHHHHHHHHH
T ss_pred hhccCCCc--cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHH---HHHccCHHHHHHHHH
Confidence 99999666 7778775544322111 1112344555555544444431 1111 466777788
Q ss_pred HHHHHHHHHHHhcC-C-ceecC---CceEEEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEe
Q 043923 335 QRHRKLVSGLEKAG-I-SCLKS---NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCF 409 (469)
Q Consensus 335 ~~~~~l~~~L~~~g-~-~v~~~---~~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~ 409 (469)
+..+++.+.|++++ + ....+ .+...+.+.+++. .. .+ .++. ..|+++||.+++|... .+.+|+|+
T Consensus 268 ~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~-~~-~~~~-~~L~~~gI~~~~g~~~----~g~iRiS~ 337 (361)
T 3m5u_A 268 QKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KD-LE-PLFV-KEAEEAGMIGLKGHRI----LGGIRASI 337 (361)
T ss_dssp HHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC---TT-HH-HHHH-HHHHHTTEECCBCCTT----TCSEEEEC
T ss_pred HHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc---hh-hh-HHHH-HHHHHCCCEEecCCCc----cCeEEEEc
Confidence 88899999999885 5 43321 1223556666631 01 11 2344 4456779999887542 24599999
Q ss_pred ec-CCHHHHHHHHHHHHHHHHhh
Q 043923 410 AN-MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 410 ~~-~~~e~i~~~l~~L~~~l~~~ 431 (469)
.. .++++++++++.|+++.++.
T Consensus 338 ~~~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 338 YNALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHhc
Confidence 86 49999999999999998764
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.70 E-value=1e-15 Score=154.95 Aligned_cols=336 Identities=12% Similarity=0.069 Sum_probs=191.7
Q ss_pred CCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCC-CCCCcHHHHHHHHHHHHhHcCCCCCC
Q 043923 35 QNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQ-DYHGLPAFKKALVEFMSEIRGNKVTF 109 (469)
Q Consensus 35 ~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~Lr~aia~~l~~~~~~~~~~ 109 (469)
.....+||+..+ .+.+. .|.+.+++.+.. .....+. +..-..+|.+.|++.+.
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~-------------~~~~~~~~~~~~~~~lae~l~~~~p--------- 141 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAM-------------QGGINLTGHNLLEGRLARLICERFP--------- 141 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHH-------------HTCSCCCSEESSHHHHHHHHHHHST---------
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHH-------------hcCCCccCCcHHHHHHHHHHHHhCC---------
Confidence 344568998655 44443 466666665421 1111111 12233566666665542
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhC-----CCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRT-----GVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
..+.++++++++||...+++... ...++|+....+|.+....+.... ......+|.+ |++.+++.+
T Consensus 142 ~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-------d~~~l~~~l 214 (454)
T 4ao9_A 142 QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-------DAQTARAQI 214 (454)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-------CHHHHHHHH
T ss_pred CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc-------hHHHHHHHH
Confidence 46889999999999999988753 234678888888876432221110 1233444432 778888888
Q ss_pred HHHHhcCCceeEEEEecCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcC
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVW 261 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 261 (469)
++. ++++.+|++..-....|.+ .+.+-+++|.++|++||+++|.||++.+ ..+..+ ..+... ..
T Consensus 215 ~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~--a~e~~g--------v~ 279 (454)
T 4ao9_A 215 ERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG--LANKLG--------IR 279 (454)
T ss_dssp HHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC--HHHHHT--------CC
T ss_pred hhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc--chhccC--------CC
Confidence 753 3366666554324556754 5678899999999999999999999974 222211 112211 22
Q ss_pred CeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHh-----c-ccccCcHHHHHHHHHHhc---CchhhHHHHHHHHHH
Q 043923 262 NRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-----S-SFGLVSSQTQYLLSALLS---DKKFTQNYISENKKR 332 (469)
Q Consensus 262 ~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~-----~-~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~ 332 (469)
+.++ +++|.+| .|+.+|.+++. +.+.+.+... . ..+..++++..++.+.|+ +.+. .+.+.++-++
T Consensus 280 PDi~---t~gK~lg-gG~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~-~~~~~~~g~~ 353 (454)
T 4ao9_A 280 SDLT---TLGKYIG-GGMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEA-AGALAERGEA 353 (454)
T ss_dssp CSEE---EEEGGGG-TTSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHH-HHHHHHHHHH
T ss_pred CcEE---EeccccC-CCCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccCh-hHHHHHHHHH
Confidence 3333 7889998 89999999994 4454443221 1 112246666666666554 3332 2222222222
Q ss_pred HHHHHHHHHHHHHhcCCceecCCceEEEEEeccccc-----c--cCChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeE
Q 043923 333 LKQRHRKLVSGLEKAGISCLKSNAGLFCWVDMRHLL-----R--SNTFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWF 405 (469)
Q Consensus 333 l~~~~~~l~~~L~~~g~~v~~~~~g~~~~v~~~~~~-----~--~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~i 405 (469)
++ +.|.+.+++.++......-|.++.+.+.... . ..+......++..++ ++||.+.|.. ++
T Consensus 354 l~---~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~~--------~~ 421 (454)
T 4ao9_A 354 LR---ARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPRG--------FV 421 (454)
T ss_dssp HH---HHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTTC--------EE
T ss_pred HH---HHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCCC--------CE
Confidence 22 2233333344443222222455556553211 0 011112234555666 5699987642 34
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHHhhcc
Q 043923 406 RVCFANMSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 406 Ri~~~~~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
.++.. +++++|++++++|++++.+...
T Consensus 422 ~~s~~-~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 422 VLSLP-LTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp ECCTT-CCHHHHHHHHHHHHHHHHHSGG
T ss_pred EEeCC-CCHHHHHHHHHHHHHHHHhccc
Confidence 44444 5999999999999999998764
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.68 E-value=2.4e-14 Score=141.73 Aligned_cols=302 Identities=16% Similarity=0.082 Sum_probs=181.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCC----CCEEEEccCCCcChHHHHhhhCCCEEEEeecc-CCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEP----GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT-SLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~ 185 (469)
....++++|+|.++..++.+.+++ ||.|+++..+|..+..++... |++++.++.. .+..+.+|++.++++|++.
T Consensus 134 ~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~-Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ 212 (501)
T 3hl2_A 134 VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA-GFEPVVIENVLEGDELRTDLKAVEAKVQEL 212 (501)
T ss_dssp CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEECEEEETTEEEECHHHHHHHHHHH
T ss_pred CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHc-CCeEEEEeeeecccccCCCHHHHHHHHHhc
Confidence 356889999997777777776653 499999999999999999888 9999988752 1235789999999999874
Q ss_pred HhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccc-cCCCCccchhhhhhccccccCCcCCe
Q 043923 186 QKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTV-FSSPGFVSIMEILKDRNCENTQVWNR 263 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~ 263 (469)
+.+..++++++| +|-.|.+-+ +++|+++|++||+++++|+||+... +...-..+..++ ..-
T Consensus 213 ---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~-----------GrA 275 (501)
T 3hl2_A 213 ---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV-----------GRI 275 (501)
T ss_dssp ---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH-----------SCC
T ss_pred ---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc-----------CCC
Confidence 223334444444 553444444 7779999999999999999997532 111100111111 014
Q ss_pred EEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043923 264 VHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKKFTQNYISENKKRLKQRHRKLVSG 343 (469)
Q Consensus 264 ~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~ 343 (469)
.+++.|..|.+- .-+..|.+...++.+.+.+....+-..+++++..+...++.-+ .+.+++..++..+..++|.+.
T Consensus 276 D~vVqS~HK~ll-vpIGG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lG---r~Gy~~ll~e~~ela~~L~~~ 351 (501)
T 3hl2_A 276 DAFVQSLDKNFM-VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLG---SNGYKKLLKERKEMFSYLSNQ 351 (501)
T ss_dssp CEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecccccce-eecCceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 567889999984 4344345556665544444332211123344443444443322 333455556666666777777
Q ss_pred HHhc----CCceecCC-ceEEEEEecccccccCChhHHHHHHHHHHHhCC---eEEe-CCC----------CCCCCC---
Q 043923 344 LEKA----GISCLKSN-AGLFCWVDMRHLLRSNTFEAEMELWKKIVYDVK---LNIS-PGS----------SCHCTE--- 401 (469)
Q Consensus 344 L~~~----g~~v~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~~G---I~v~-pg~----------~f~~~~--- 401 (469)
|+++ |-++...+ ...-+.+.+........ ....++-..| ...+ -.|. +|. .|+...
T Consensus 352 L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~L-f~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~ 429 (501)
T 3hl2_A 352 IKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSML-FTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNY 429 (501)
T ss_dssp HHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHH-HHTTCCSCEEECTTCCEEETTEEESSTTTTSSCC
T ss_pred HHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHH-HhcCCCcceeecCCCceEECCeeecCcccCCCCC
Confidence 7664 55555433 22344555554311111 1222333443 3444 4444 454 455421
Q ss_pred -CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccccc
Q 043923 402 -PGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTTLH 436 (469)
Q Consensus 402 -~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~~~ 436 (469)
..|+-++-+- ++++|++.++++|.+++.+.+|+.+
T Consensus 430 ~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~ 466 (501)
T 3hl2_A 430 PCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERS 466 (501)
T ss_dssp SSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred CchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2366665543 5999999999999999998887544
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.63 E-value=4.6e-14 Score=143.29 Aligned_cols=356 Identities=13% Similarity=0.069 Sum_probs=193.3
Q ss_pred CCCCCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCccccccccc-CCCCCCcHHHHHHHHHHHHhHcCCCCC
Q 043923 34 VQNPTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELAL-FQDYHGLPAFKKALVEFMSEIRGNKVT 108 (469)
Q Consensus 34 ~~~~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~~~g~~~Lr~aia~~l~~~~~~~~~ 108 (469)
+.....+||+..+ .+.+. .+.+.+++++.... +..... +.+. +...++|+.+.+....
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~~~~~----~~~~~lae~L~~~~p~--- 122 (456)
T 4atq_A 60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAH----------FTHTCFMVTPY----EGYVAVTEQLNRLTPG--- 122 (456)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHH----------CSCCTTTTSCC----HHHHHHHHHHHHHSSC---
T ss_pred eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhh----------ccCcccCccCc----HHHHHHHHHHHHhCCC---
Confidence 3344568998766 55554 46666666552110 111111 1122 2233444444433210
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCCcChHHHHhhhCC-------------CEEEEeeccC----CC
Q 043923 109 FDTSKIVLTAGATSANETLMFCLA--EPGEAFLLPTPYYPGFDRDLKWRTG-------------VEIVPIQCTS----LN 169 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~~g-------------~~~~~v~~~~----~~ 169 (469)
-..+.+++++++++|++.+++... .....|+....+|++....+....+ ..+..+|... ..
T Consensus 123 ~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 202 (456)
T 4atq_A 123 DHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREEN 202 (456)
T ss_dssp SSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSS
T ss_pred CCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCC
Confidence 124678999999999999987742 2346788888888775432211101 1344444321 00
Q ss_pred CcccCHHHHHHHHHHHHh--cCCceeEEEEecCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccch
Q 043923 170 GFQITETAIEEAYQLAQK--RHLKVKGVLVTNPSNPLGT-TMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSI 246 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~--~~~~~~~vvl~~P~NPtG~-~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~ 246 (469)
.-..+.+.++..++.... .+.++.+|++.--..-.|. ..+.+-+++|.++|++||+++|.||+..++.-.+.- ..
T Consensus 203 ~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~-~a- 280 (456)
T 4atq_A 203 PEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEW-FA- 280 (456)
T ss_dssp TTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SG-
T ss_pred CcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccc-cc-
Confidence 001134444444443222 1235666555533444665 457789999999999999999999999874222322 11
Q ss_pred hhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhc--ccccCcHHHHHHHHHHhcC---chh
Q 043923 247 MEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--SFGLVSSQTQYLLSALLSD---KKF 321 (469)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~~ 321 (469)
.+... ..+.++ +++|.+| .|+.+|.+++.+ .+.+.+.... ..+..++++..++.+.|+. .++
T Consensus 281 ~e~~g--------v~PDiv---t~gK~lg-gg~P~~av~~~~-~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l 347 (456)
T 4atq_A 281 VDHEG--------VVPDII---TMAKGIA-GGLPLSAITGRA-DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDL 347 (456)
T ss_dssp GGGTT--------CCCSEE---EECGGGG-TTSSCEEEEEEH-HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccC--------CCCchh---hhhhccc-CcCCceeeEecH-HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccH
Confidence 11111 223333 6789998 999999999954 4433332221 1223567777766666543 222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC---Cceec--CCceEEEEEeccccccc-CChhHHHHHHHHHHHhCCeEEeCCC
Q 043923 322 TQNYISENKKRLKQRHRKLVSGLEKAG---ISCLK--SNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYDVKLNISPGS 395 (469)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~l~~~L~~~g---~~v~~--~~~g~~~~v~~~~~~~~-~~~~~~~~l~~~ll~~~GI~v~pg~ 395 (469)
.+..++.-+++.+. |.+..+++. .++.. ..-|+++.+++...... ........++..++ ++||.+.++.
T Consensus 348 -~~~~~~~g~~l~~~---L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g 422 (456)
T 4atq_A 348 -NGRARHIEELALGK---LRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCG 422 (456)
T ss_dssp -HHHHHHHHHHHHHH---HHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEEC
T ss_pred -HHHHHHHHHHHHHH---HHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecC
Confidence 22222222233322 222222221 11111 12256777777532211 11122334555555 6699998653
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 043923 396 SCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDS 430 (469)
Q Consensus 396 ~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~ 430 (469)
.+ .+.||+.... ++++++++++++|.++++.
T Consensus 423 ~~----~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 423 TY----GNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp TT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 32 4579999876 4999999999999999975
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.61 E-value=3.8e-13 Score=132.66 Aligned_cols=306 Identities=14% Similarity=0.135 Sum_probs=185.0
Q ss_pred CCCCCCcHHHHHHHHHHHHhHcCCCCCCCCC----cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH------
Q 043923 82 FQDYHGLPAFKKALVEFMSEIRGNKVTFDTS----KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD------ 151 (469)
Q Consensus 82 Y~~~~g~~~Lr~aia~~l~~~~~~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~------ 151 (469)
|+...-.++++....+..++.|+ .+.. ||-.- ++++|...++.+|++|||+|+..+..+.++..-
T Consensus 92 YgGce~vD~iE~la~~rak~lF~----a~~A~w~VNVQP~-SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~ 166 (490)
T 3ou5_A 92 YGGAEVVDEIELLCQRRALEAFD----LDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDV 166 (490)
T ss_dssp ----CHHHHHHHHHHHHHHHHTT----CCTTTEEEECCCS-SHHHHHHHHHHHHCC-CCCEECBC---------------
T ss_pred cCCChHHHHHHHHHHHHHHHHhC----CCccccCCCCCcC-CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCC
Confidence 44444455666666666666666 4444 45554 455677788899999999999999877765321
Q ss_pred --HhhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q 043923 152 --LKWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHL 227 (469)
Q Consensus 152 --~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~i 227 (469)
.... |. ++++++++++ ...+|.+++++...+. ++++|+..-..+|- .++ .+++.++|.+.|.++
T Consensus 167 ~~v~~s-g~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r--~id---~~~~reIAd~vGA~L 234 (490)
T 3ou5_A 167 KRISAT-SIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHL 234 (490)
T ss_dssp --------------CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHHTCEE
T ss_pred cccccc-cccccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCcc--ccC---HHHHHHHHhhcccEE
Confidence 1111 33 4555566643 4579999999988876 99987766444432 345 555667777999999
Q ss_pred EEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCH--------------HHHH
Q 043923 228 ISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDD--------------MVVA 293 (469)
Q Consensus 228 I~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~--------------~~~~ 293 (469)
++|-+|....-.+.-+++.... -.++..|.+|+| .|-|-|.|++.+. .+.+
T Consensus 235 m~DmAHiaGLVA~g~~psP~~~-------------ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~k 299 (490)
T 3ou5_A 235 LADMAHISGLVAAKVIPSPFKH-------------ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFED 299 (490)
T ss_dssp EEECGGGHHHHHTTSSCCGGGT-------------CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHH
T ss_pred EechhhhhhhhcccccCCcccc-------------ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHH
Confidence 9999995443334444554443 237788999997 8889999998652 2344
Q ss_pred HHHHhccccc-CcH-HHHHHHH-HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCceec-CCceEEEEEecccc-c
Q 043923 294 AATKMSSFGL-VSS-QTQYLLS-ALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKAGISCLK-SNAGLFCWVDMRHL-L 368 (469)
Q Consensus 294 ~~~~~~~~~~-~s~-~~q~~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~-~~~g~~~~v~~~~~-~ 368 (469)
.+....-++. .++ +...++. .++.. .+....+...+++.++.+.|.+.|.+.|+++.. ......+++++... .
T Consensus 300 kin~aVFPg~qggp~~h~IAAkAVaf~E--a~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~ 377 (490)
T 3ou5_A 300 RINFAVFPSLQGGPHNHAIAAVAVALKQ--ACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL 377 (490)
T ss_dssp HHHHHHTTTTCSSCCHHHHHHHHHHHHH--HHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC
T ss_pred HHHhhcCccccccchHHHHHHHHHHHHH--HHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCC
Confidence 4443322222 122 2222211 11211 112234556677778889999999999998863 34456778888642 1
Q ss_pred ccCChhHHHHHHHHHHHhCCeEEe----CCCCCCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHH
Q 043923 369 RSNTFEAEMELWKKIVYDVKLNIS----PGSSCHCTEPGWFRVCFAN-----MSEDTLKLSMQRLKAFVD 429 (469)
Q Consensus 369 ~~~~~~~~~~l~~~ll~~~GI~v~----pg~~f~~~~~~~iRi~~~~-----~~~e~i~~~l~~L~~~l~ 429 (469)
.. ..++.+|++.||.+. |+.. .+..++.|||+... ..+++++++.+-|.+++.
T Consensus 378 tG-------~~ae~~Le~agItvNkN~iP~D~-sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 378 DG-------ARAERVLELVSITANKNTCPGDR-SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CH-------HHHHHHHHHTTEECEEECCTTCC-CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CH-------HHHHHHHHHcCcEECCCCCCCCC-CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 21 346677889999886 5542 22235679998843 478999999999988775
No 234
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.59 E-value=1.2e-12 Score=131.10 Aligned_cols=321 Identities=16% Similarity=0.096 Sum_probs=183.2
Q ss_pred cHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEEccCCCcChHHHHhhhCCCEEEEe
Q 043923 88 LPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEP----GEAFLLPTPYYPGFDRDLKWRTGVEIVPI 163 (469)
Q Consensus 88 ~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v 163 (469)
...+.+.+..++.+..|. + +....++++|+|.+...++.+.+++ ++.|+++.-+|..+..++... |+.++.+
T Consensus 96 ~~~~e~~~~~~~~~~lGl--p-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~-Gl~p~~v 171 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGV--H-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTA-GFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHHHTC--T-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCC--C-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHc-CCeeEEE
Confidence 445667777777776662 1 2345688899884444444444343 899999999999999999887 9998888
Q ss_pred eccC-CCCcccCHHHHHHHHHHHHhcCCceeEEEEecCC-CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCC
Q 043923 164 QCTS-LNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSP 241 (469)
Q Consensus 164 ~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~ 241 (469)
+... +..+.+|++.++++|++.. .+..++|+.+|+ +.+|.+-+ +++|+++|++||+++++|+||+.. +..
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~---~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~-~~~- 243 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELG---PEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQ-SSK- 243 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHC---GGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTT-CHH-
T ss_pred EeeecCccCCcCHHHHHHHHHhcC---CCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchh-hhh-
Confidence 6521 2467899999999998742 124456666674 45666665 666999999999999999999853 110
Q ss_pred Cccchh-hhhhccccccCCcCCeEEEEccCccccCCCcceEEEEEecCHHHHHHHHHhcccccCcHHHHHHHHHHhcCch
Q 043923 242 GFVSIM-EILKDRNCENTQVWNRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSALLSDKK 320 (469)
Q Consensus 242 ~~~s~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~GlRiG~li~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~ 320 (469)
...+. +... ...-..++.|.+|++. .....+++...+....+...........++++......++..+
T Consensus 244 -~~~l~~~a~~--------~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G- 312 (450)
T 3bc8_A 244 -CMHLIQQGAR--------VGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG- 312 (450)
T ss_dssp -HHHHHHHHHH--------HSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH-
T ss_pred -hHhHHHHHhc--------ccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH-
Confidence 01111 1111 0133456789999986 5566777777555444433322111123344444444443221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh----cCCceecCCc-eEEEEEecccccccCChhHHHHHHHHHHHh--CCeEEeC
Q 043923 321 FTQNYISENKKRLKQRHRKLVSGLEK----AGISCLKSNA-GLFCWVDMRHLLRSNTFEAEMELWKKIVYD--VKLNISP 393 (469)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~~~~~-g~~~~v~~~~~~~~~~~~~~~~l~~~ll~~--~GI~v~p 393 (469)
.+.+.+..++..+..+++.+.+++ +|+.+...+. +.-..+.+........ .+...+.-.+... .|..+.+
T Consensus 313 --~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~-~D~tkl~i~~~~~g~sG~~v~~ 389 (450)
T 3bc8_A 313 --CSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHD-KAVTQLGSMLFTRQVSGARAVP 389 (450)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSS-CHHHHHHHHHHHTTCCSCEEEC
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccccc-CCCceeEEEecCCCCccceeee
Confidence 222344433344444555555543 3666554321 0011122322111111 2333444433221 1344431
Q ss_pred --------CC---CCCC----CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhccc
Q 043923 394 --------GS---SCHC----TEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITTT 434 (469)
Q Consensus 394 --------g~---~f~~----~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~~ 434 (469)
|. .|+. ....++=+.++. .+++++++++++|+++.++.+|+
T Consensus 390 ~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 390 LGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp SCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11 1221 124466565543 49999999999999998877663
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.55 E-value=1.7e-12 Score=132.30 Aligned_cols=348 Identities=15% Similarity=0.172 Sum_probs=189.0
Q ss_pred CCCeeeeecc--ccccC--hHHHHHHHhcCCCccccccCCcccccccccCCCCCC-cHHHHHHHHHHHHhHcCCCCCCCC
Q 043923 37 PTGIIQMGLA--ENQLS--FDLLESWLDRNPDAAGFKRDGQSIFRELALFQDYHG-LPAFKKALVEFMSEIRGNKVTFDT 111 (469)
Q Consensus 37 ~~~~i~L~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g-~~~Lr~aia~~l~~~~~~~~~~~~ 111 (469)
...+||+..+ .+.+. .+.+.+++++. +..+..|....+ ..+....+|+.+.+..+ .+.
T Consensus 66 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q-------------~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p----~~~ 128 (473)
T 4e3q_A 66 GRRYLDANSGLWNMVAGFDHKGLIDAAKAQ-------------YERFPGYHAFFGRMSDQTVMLSEKLVEVSP----FDS 128 (473)
T ss_dssp CCEEEETTTTTTTCTTCSCCHHHHHHHHHH-------------HHHCCCCCCCTTEEEHHHHHHHHHHHHHSS----CSS
T ss_pred CCEEEEcccCHHHhhccCCCHHHHHHHHHH-------------HHhcccccccccccCHHHHHHHHHHHhhCC----CCc
Confidence 3457888665 44443 46666666542 122222222211 12344456666655432 345
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------CCC-CEEEEccCCCcChHHHHhhhCCC-----------EEEEeeccCC---C
Q 043923 112 SKIVLTAGATSANETLMFCLA-------EPG-EAFLLPTPYYPGFDRDLKWRTGV-----------EIVPIQCTSL---N 169 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~-------~~g-d~Vl~~~P~y~~~~~~~~~~~g~-----------~~~~v~~~~~---~ 169 (469)
+.|++++++++|++.+++... .++ ..|+...-+|.+....+....|. .++.++.... +
T Consensus 129 ~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~ 208 (473)
T 4e3q_A 129 GRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYG 208 (473)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHS
T ss_pred cEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccc
Confidence 789999999999999998742 233 57888888887753322111111 1222222100 0
Q ss_pred CcccC--------HHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccC
Q 043923 170 GFQIT--------ETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFS 239 (469)
Q Consensus 170 ~~~~d--------~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~ 239 (469)
..... .+++++.+.+. ...++.+|++ -| ..-.|.+ .+.+-+++|.++|++||+++|.||+..++.-.
T Consensus 209 ~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~-EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRt 285 (473)
T 4e3q_A 209 EEGETEEQFVARLARELEETIQRE--GADTIAGFFA-EPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRT 285 (473)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEE-CSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTT
T ss_pred cccchhhHHHHHHHHHHHHHHHhh--CCCceEEEEe-CCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcc
Confidence 00001 12334444321 1124555444 45 4456654 56788999999999999999999999984222
Q ss_pred CCCccchhhhhhccccccCCcCCeEEEEccCccccCCCc-ceEEEEEecCHHHHHHHHH----hc-----ccccCcHHHH
Q 043923 240 SPGFVSIMEILKDRNCENTQVWNRVHIVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK----MS-----SFGLVSSQTQ 309 (469)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-lRiG~li~~~~~~~~~~~~----~~-----~~~~~s~~~q 309 (469)
+..+ ..+... ..+.++ +++|.++ .| +.+|.+++.+ .+.+.+.. .. ..+..++++.
T Consensus 286 G~~f--a~e~~g--------v~PDi~---t~~K~l~-gG~~Pl~av~~~~-~i~~~~~~~~~~~~~~~hg~T~~Gnpla~ 350 (473)
T 4e3q_A 286 GNTW--GCVTYD--------FTPDAI---ISSKNLT-AGFFPMGAVILGP-ELSKRLETAIEAIEEFPHGFTASGHPVGC 350 (473)
T ss_dssp SSSC--HHHHTT--------CCCSEE---EECGGGG-TTSSCCEEEEECH-HHHHHHHHHHHHHSCCCCCCTTTTCHHHH
T ss_pred cchh--HHHhcC--------CCCChH---Hhccccc-CCCCCcccccccH-HHHHHhccccccccccccCCCCCCCcchh
Confidence 3221 111211 223344 5789998 66 9999999954 44443322 11 1122466666
Q ss_pred HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHhc----CCceecCCceEEEEEecccccccC-----ChhHHHHHH
Q 043923 310 YLLSALLSDKKFTQNYISENKKRLKQRHRKLVSGLEKA----GISCLKSNAGLFCWVDMRHLLRSN-----TFEAEMELW 380 (469)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~v~~~~~g~~~~v~~~~~~~~~-----~~~~~~~l~ 380 (469)
.++.+.|+..+- +...++.++.-++|.+.|+++ .+.-... -|+++-+++....... .......+.
T Consensus 351 Aaala~L~~i~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~~~~~~~~~~~~~~ 424 (473)
T 4e3q_A 351 AIALKAIDVVMN-----EGLAENVRRLAPRFEERLKHIAERPNIGEYRG-IGFMWALEAVKDKASKTPFDGNLSVSERIA 424 (473)
T ss_dssp HHHHHHHHHHHH-----SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHH
T ss_pred hhhhhhhhhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-cceEEEEEEecCccccccccccHHHHHHHH
Confidence 666665542210 112223333444455555543 2211112 2466667653221111 111123445
Q ss_pred HHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhcc
Q 043923 381 KKIVYDVKLNISPGSSCHCTEPGWFRVCFAN-MSEDTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 381 ~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~-~~~e~i~~~l~~L~~~l~~~~~ 433 (469)
..++ ++||.++|.. +.+|++... ++++++++++++|.+++++...
T Consensus 425 ~~~~-~~Gll~~~~g-------~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 425 NTCT-DLGLICRPLG-------QSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp HHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HCCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5554 6799998642 468988765 4999999999999999987654
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.52 E-value=1.3e-13 Score=149.70 Aligned_cols=216 Identities=13% Similarity=0.117 Sum_probs=126.8
Q ss_pred ceeEEEEecC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEc
Q 043923 191 KVKGVLVTNP-SNPLGTT-MSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVY 268 (469)
Q Consensus 191 ~~~~vvl~~P-~NPtG~~-~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~ 268 (469)
++.+|++..- ++..|.. .+.+.+++|.++|++||+++|+||++.++...+..+ . .+... ..+.++
T Consensus 594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a-~e~~g--------v~PDii--- 660 (831)
T 4a0g_A 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-T-TELLG--------CKPDIA--- 660 (831)
T ss_dssp EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-T-HHHHS--------SCCSEE---
T ss_pred cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-h-hHhcC--------CCCcEE---
Confidence 5666555532 5777875 488889999999999999999999999853334332 2 12211 223333
Q ss_pred cCccccCCCc-ceEEEEEecCHHHHHHHHHh-------c-ccccCcHHHHHHHHHHhc---CchhhHHHHHHHHHHHHH-
Q 043923 269 SLSKDLGLPG-FRVGAIYSNDDMVVAAATKM-------S-SFGLVSSQTQYLLSALLS---DKKFTQNYISENKKRLKQ- 335 (469)
Q Consensus 269 S~SK~~g~~G-lRiG~li~~~~~~~~~~~~~-------~-~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~l~~- 335 (469)
+++|.+| .| +++|++++++ .+.+.+... . .....+++++.++.+.|+ +.++ .+.+.+..+++++
T Consensus 661 tlsK~L~-gG~~Plgav~~~~-~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l-~~~~~~~~~~l~~~ 737 (831)
T 4a0g_A 661 CFAKLLT-GGMVPLAVTLATD-AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET-NHNITSQGKTLREL 737 (831)
T ss_dssp EECGGGG-TTSSCCEEEEECH-HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT-CTTBCTTSSBBCCC
T ss_pred EEecccc-cCccCcEEEEECH-HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHH
Confidence 7999998 68 8999999954 454444321 1 112356677766666554 2222 1111111111111
Q ss_pred HHHHHHHHHHhcC-CceecCCceEEEEEecccccccC--ChhHHHHHHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeec-
Q 043923 336 RHRKLVSGLEKAG-ISCLKSNAGLFCWVDMRHLLRSN--TFEAEMELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFAN- 411 (469)
Q Consensus 336 ~~~~l~~~L~~~g-~~v~~~~~g~~~~v~~~~~~~~~--~~~~~~~l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~- 411 (469)
..+.+.+.+.++. +..... .|.++.+.+....... .......++..++ ++||.++|+ .+.+|++...
T Consensus 738 l~~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~-------g~~lrl~pp~~ 808 (831)
T 4a0g_A 738 WDEELVQQISSHSAVQRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLR-EDGIFTRPL-------GNVIYLMCGPC 808 (831)
T ss_dssp SCHHHHHHHHHSTTEEEEEE-ETTEEEEEEC---------CHHHHHHHHHHH-HTTEECCCB-------TTEEEEECCTT
T ss_pred HHHHHHHHHhhCCCceeEee-cccEEEEEEecCccccccchHHHHHHHHHHH-HCCcEEEec-------CCEEEEECCCC
Confidence 0122444555553 222233 3467777775321100 1122345556655 679999975 2579999655
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 043923 412 MSEDTLKLSMQRLKAFVDSI 431 (469)
Q Consensus 412 ~~~e~i~~~l~~L~~~l~~~ 431 (469)
++++++++++++|.+++++.
T Consensus 809 ~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 809 TSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp CCHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 59999999999999998765
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.87 E-value=5.5 Score=36.66 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=66.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
-.-++||.|++..=..+...|.+.|-.|++..-.-......++.. |.+...+.+|- -|.+++++.+++...+-.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 344667766666556677778889988888765443344445555 77777777663 266778877776655445
Q ss_pred ceeEEEEecC-CCCCCC--CCCHHHHHHHHHHH
Q 043923 191 KVKGVLVTNP-SNPLGT--TMSRNELNLLVNII 220 (469)
Q Consensus 191 ~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~~ 220 (469)
++.. +++|. .++.+. -++.++++++.++-
T Consensus 103 ~iDi-LVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RIDV-LFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEEE-EEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 7775 44544 333332 35888988888754
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=81.62 E-value=8.5 Score=34.50 Aligned_cols=104 Identities=10% Similarity=0.106 Sum_probs=62.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++....-.......... +.++..+.+|- -|.+.+++.+++.....
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADI-----SDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHC
Confidence 3445677776665555666778888988887665443333444444 66777777653 25677777776654444
Q ss_pred CceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
.++..+|.+--..+.+. -.+.++++++.+.
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46775444322333332 3577777777663
No 239
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=79.40 E-value=12 Score=33.88 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....++||.|+...=..+...|.+.|..|++..-.-......+... ++.++..++. |.+.+++.++......
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dv~-------~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-GAVALYGDFS-------CETGIMAFIDLLKTQT 97 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-TCEEEECCTT-------SHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-CCeEEECCCC-------CHHHHHHHHHHHHHhc
Confidence 4456777777665555666777788877777654433333444444 6655544432 5677777777655444
Q ss_pred CceeEEEEecCC-C-CCCCCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-N-PLGTTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~-N-PtG~~~s~e~l~~l~~ 218 (469)
.++..+| +|.. . +.....+.+++++..+
T Consensus 98 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 98 SSLRAVV-HNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp SCCSEEE-ECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCccCCCCCCCCHHHHHHHHH
Confidence 5677544 4442 1 2223345566555554
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.11 E-value=13 Score=33.96 Aligned_cols=103 Identities=12% Similarity=0.141 Sum_probs=60.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++......
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3445677766665555666778888988887664433333333444 66666666653 25677777776654444
Q ss_pred CceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
.++..+ ++|. ..+.+. ..+.++++++.+.
T Consensus 100 g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDVL-VNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCEE-EECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 466754 4444 233332 3577787776653
No 241
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=78.96 E-value=12 Score=33.51 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=54.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++......
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADV-----TNEADATAALAFAKQEF 79 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 3445677777665555666778888888877655444333333333 55555566552 25677777776654444
Q ss_pred CceeEEEEecC-CCCCCC------CCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLGT------TMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG~------~~s~e~l~~l~~~ 219 (469)
.++..+| +|. ..+.+. ..+.+++++..+.
T Consensus 80 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 80 GHVHGLV-NCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp SCCCEEE-ECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 4667544 444 222222 3566777766653
No 242
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.40 E-value=17 Score=33.01 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=67.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++-..+++|.|++..=..+...|.+.|-.|++..-.-..... .+... |.++..+.+|- -|.+++++.+++.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDV-----TDELAIEAAFSKL 80 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHH
Confidence 444556676666665566667788899888887643222222 23334 77888888763 2678888888877
Q ss_pred HhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNII 220 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~~ 220 (469)
.++..++.. +++|. .++.+. -++.++++++.++-
T Consensus 81 ~~~~G~iDi-LVNNAG~~~~~~~~~~~~e~~~~~~~vN 117 (255)
T 4g81_D 81 DAEGIHVDI-LINNAGIQYRKPMVELELENWQKVIDTN 117 (255)
T ss_dssp HHTTCCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHCCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 666667775 45554 333332 36888888887743
No 243
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=77.01 E-value=16 Score=32.73 Aligned_cols=103 Identities=10% Similarity=0.078 Sum_probs=60.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++.....
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDV-----TRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeC-----CCHHHHHHHHHHHHHHc
Confidence 3445777777666556666778888988887654433333333444 55566666553 26677887777655555
Q ss_pred CceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+|.+-...+.+ .-.+.+++++..+
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5677544432222222 2346777776665
No 244
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=76.78 E-value=13 Score=33.55 Aligned_cols=100 Identities=10% Similarity=0.140 Sum_probs=61.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.++||.|++..=..+...|.+.|-.|++.+-.-....... .. +.++..+.+|- -|.+++++.+++..++-.+.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~-~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA-KE-RPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TT-CTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hh-cCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4677777776666777778889988887664432222222 23 55666666653 25677777776655544567
Q ss_pred eEEEEecC-CCCCCC--CCCHHHHHHHHHHH
Q 043923 193 KGVLVTNP-SNPLGT--TMSRNELNLLVNII 220 (469)
Q Consensus 193 ~~vvl~~P-~NPtG~--~~s~e~l~~l~~~~ 220 (469)
.. +++|. .++.+. -++.++++++.++-
T Consensus 77 Di-LVNNAG~~~~~~~~~~~~e~~~~~~~vN 106 (247)
T 3ged_A 77 DV-LVNNACRGSKGILSSLLYEEFDYILSVG 106 (247)
T ss_dssp CE-EEECCCCCCCCGGGTCCHHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 75 45554 333332 36788888887743
No 245
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=75.82 E-value=17 Score=32.59 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=60.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.++..++......
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDI-----ADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3456777777666666677778888988887765433333333334 56666666653 25677777666544433
Q ss_pred CceeEEEEecCC-CCCCC--CCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~~ 219 (469)
.++.. +++|.. .+.+. -.+.+++++..+.
T Consensus 81 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 81 GAIDL-LHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SSEEE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 46665 444442 22222 3477777776653
No 246
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=75.79 E-value=36 Score=31.02 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=62.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC----------hHHHHhhhCCCEEEEeeccCCCCcccCHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG----------FDRDLKWRTGVEIVPIQCTSLNGFQITETAI 178 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 178 (469)
++...++||.|+...=..+...|.+.|..|++..-.-.. ....+... |.++..+.+|- -|.+.+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v 80 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDI-----RDGDAV 80 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCT-----TSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHH
Confidence 344567777776665566677788889888776543321 12223344 77888887763 256777
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
++.+++......++..+|.+--..+.+. -.+.++++++.+.
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777765444446775444322222232 3577787776653
No 247
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=75.68 E-value=32 Score=30.68 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=57.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.+++.++......
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADV-----TSEKDVQTALALAKGKF 84 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHC
Confidence 3445777766655555666777788877777654434444444444 55566666553 25677777776554333
Q ss_pred CceeEEEEecCCCCCCC--------CCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLGT--------TMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~--------~~s~e~l~~l~~ 218 (469)
.++.++|.+--....+. ..+.+++++..+
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 46665443322222221 246666666554
No 248
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=75.14 E-value=12 Score=34.18 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=58.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++......
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345666666555445566777788988887654433333333444 55555666553 256777777765544444
Q ss_pred ceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
++..+|.+--..+.+. -.+.++++++.+.
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6775443322222222 3577887777664
No 249
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=74.85 E-value=25 Score=31.84 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=61.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++......
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDL-----TNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3445677776665555666778888988887766555555555544 55555555552 25677777776554443
Q ss_pred CceeEEEEecCC-C-C-CC--CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-N-P-LG--TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~-N-P-tG--~~~s~e~l~~l~~~ 219 (469)
.++..+ ++|.. . + .+ .-++.+++++..+.
T Consensus 84 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 84 GRLDIV-DNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp SCCCEE-EECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 466654 44442 2 2 11 13577777776653
No 250
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=74.65 E-value=20 Score=32.05 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=60.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
++...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++....
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADI-----SKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHh
Confidence 34455777776665555666777788888887765433333334444 66666666653 2567777777655444
Q ss_pred CCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 189 ~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
..++..+|.+-.. .+.+ ...+.+++++..+.
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 4466754443222 2122 22477777766653
No 251
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=74.35 E-value=14 Score=32.68 Aligned_cols=101 Identities=14% Similarity=0.188 Sum_probs=56.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.......... +..+..+.+|- -|.+.+++.++.......++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-GNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 4667766665555666777788888887655433333333333 33455666552 25677777776554444466
Q ss_pred eEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 193 KGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 193 ~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
..+|.+--..+.+. ..+.++++++.+.
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 76554422322222 3577777777664
No 252
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=74.13 E-value=20 Score=32.52 Aligned_cols=103 Identities=10% Similarity=0.062 Sum_probs=60.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++.. ...
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~-~~~ 101 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNV-----TSEDSVLAAIEAA-NQL 101 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHH-TTS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHH-HHh
Confidence 3445777777666556666778888988887654433333334444 55666666653 2667888877765 333
Q ss_pred CceeEEEEecC-CCCCC-------CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLG-------TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG-------~~~s~e~l~~l~~~ 219 (469)
.+...+|.++. ..+.+ ...+.+++++..+.
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 46666555423 22222 34677777666653
No 253
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=73.64 E-value=16 Score=33.19 Aligned_cols=102 Identities=12% Similarity=0.154 Sum_probs=58.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++......
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANL-----SDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 3445677766665555666778888988877654433333344444 66777777653 25677777776554444
Q ss_pred CceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+| +|.. .+.+ ...+.+++++..+
T Consensus 100 g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 100 EGIDILV-NNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp TSCCEEE-ECCCCC-----CCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 4677544 4442 2222 2245566666554
No 254
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.59 E-value=15 Score=33.55 Aligned_cols=104 Identities=15% Similarity=0.186 Sum_probs=59.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc------------Ch---HHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP------------GF---DRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~------------~~---~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
+...++||.|+...=..+...|.+.|..|++..-... .. ...+... |.++..+.+|- -|
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDV-----RD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCT-----TC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccC-----CC
Confidence 3445677777665556666778888888877543210 00 1112233 66777777663 25
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHH
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNI 219 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~ 219 (469)
.+.+++.+++......++..+|.+--..+.+...+.+++++..+.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 677777776654444467754433223333344677787776653
No 255
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=72.54 E-value=25 Score=31.26 Aligned_cols=100 Identities=12% Similarity=0.159 Sum_probs=53.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... |+.++.+++. |.+.+++.++.......
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~-------~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVA-------DPASVERGFAEALAHLG 76 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-TCEEEECCTT-------CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCEEEEecCC-------CHHHHHHHHHHHHHHcC
Confidence 345677766655555666777788888877543322222223333 5444443332 56777777765443334
Q ss_pred ceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
++..+| +|.. .+.+ ...+.+++++..+.
T Consensus 77 ~id~lv-n~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 77 RLDGVV-HYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp SCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 567544 4432 2222 23466777766653
No 256
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=72.28 E-value=33 Score=30.47 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC-cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY-PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y-~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
...++||.|+...=..+...|.+.|..|++..-.- ......+... |.++..+++|- -|.+.+++.+++.....
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDV-----SQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 34577776666555566677778888777654322 2222223333 65666666653 25677777766544333
Q ss_pred CceeEEEEecCCCCCC--CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~ 219 (469)
.++..+|.+-...+.+ ...+.++++++.+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4666544332222222 23566777666653
No 257
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=72.23 E-value=19 Score=32.76 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=57.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..++||.|+...=..+...|.+.|..|++....-.......... +.++..+.+|- -|.+.+++.+++......+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDV-----TDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeC-----CCHHHHHHHHHHHHHhCCC
Confidence 34666666555555566777788988887765544444444433 54555555542 2567777777655444446
Q ss_pred eeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 192 VKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
+..+|.+-...+.+. ..+.+++++..+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 675443322222222 356677766655
No 258
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=71.70 E-value=54 Score=29.55 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=60.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-------h---HHHHhhhCCCEEEEeeccCCCCcccCHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-------F---DRDLKWRTGVEIVPIQCTSLNGFQITETAI 178 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-------~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 178 (469)
++...++||.|+...=..+...|.+.|..|++..-.-.. . ...+... |.++..+.+|- -|.+.+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v 77 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDI-----REEDQV 77 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCT-----TCHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCHHHH
Confidence 344557777776655556667787888888776543221 1 1222334 77888887763 256777
Q ss_pred HHHHHHHHhcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
++.+++......++.. +++|.. ...+ ...+.+++++..+
T Consensus 78 ~~~~~~~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 78 RAAVAATVDTFGGIDI-LVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHHSCCCE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCE-EEECCCcccCCCcccCCHHHHHHHHh
Confidence 7777665444446675 444442 2222 2357777776665
No 259
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=71.00 E-value=41 Score=30.86 Aligned_cols=104 Identities=12% Similarity=0.142 Sum_probs=59.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh--CC-CEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR--TG-VEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~--~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... .+ .++..+.+|- -|.+.+++.+++..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHH
Confidence 3445666666655555666778788888887665443333332221 13 4566666653 25677777776654
Q ss_pred hcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
....++..+| +|. ..+.+. -++.+++++..+.
T Consensus 115 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVC-ANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4444667544 444 233332 3577887777664
No 260
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=70.75 E-value=21 Score=31.84 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=57.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...+++|.|+...=..+...|.+.|..|++..-.-.......... +.+...+.+|- -|.+++++.+++.....
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMALNV-----TNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 3445677766665555666778888988887654332222333333 44445555542 25677777777654444
Q ss_pred CceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
.++.. +++|. ..+.+ ...+.+++++..+.
T Consensus 82 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 82 GGVDI-LVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CCCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 46665 44444 22222 23477777776653
No 261
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=69.90 E-value=50 Score=29.80 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=60.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++-.-++||.|++..=..+...|.+.|-.|++..-.-..- ...+... |.++..+++|-. |.+++++.+++..
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR-QPRATYLPVELQ-----DDAQCRDAVAQTI 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH-CTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc-CCCEEEEEeecC-----CHHHHHHHHHHHH
Confidence 4444566666665554566677888887777655432221 2223334 666667776532 5677777776655
Q ss_pred hcCCceeEEEEecC--CCCCCCCCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP--SNPLGTTMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P--~NPtG~~~s~e~l~~l~~~ 219 (469)
++-.+... +++|. +.+...-.+.+++++..+.
T Consensus 79 ~~~G~iDi-LVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLDG-LVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCCE-EEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCCE-EEECCCCCCCCCccCCHHHHHHHHHH
Confidence 44456775 55555 2233445678888877764
No 262
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.19 E-value=62 Score=28.72 Aligned_cols=102 Identities=9% Similarity=0.026 Sum_probs=61.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.++...
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDA-----RNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcC-----CCHHHHHHHHHHHH
Confidence 344577777766655666677878888888766543333222 2333 66777777763 26678888777665
Q ss_pred hcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
.. .++..+| +|. ..+.+. -.+.+++++..+.
T Consensus 80 ~~-g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 80 AH-APLEVTI-FNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp HH-SCEEEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hh-CCceEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 55 5677544 444 233222 3567777766653
No 263
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=68.39 E-value=65 Score=30.37 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC----------hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG----------FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
...++||.|+...=..+...|.+.|..|++..-.-.. ....+... |.++..+.+|- -|.+.+++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~ 118 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDV-----RDEQQISA 118 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHH
Confidence 3456666666555556667778888877776543321 12223334 77888777763 26678888
Q ss_pred HHHHHHhcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHH
Q 043923 181 AYQLAQKRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~ 218 (469)
.+++......++..+| +|. ....+ ...+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilV-nnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILV-NNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 7776554444677544 444 22222 2356677666554
No 264
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.40 E-value=39 Score=31.00 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC------------cCh---HHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY------------PGF---DRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y------------~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
+...++||.|+...=..+...|.+.|..|++.+-.- ... ...+... |.++..+.+|- -|
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDV-----RD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCC-----CC
Confidence 344577777666555566677888898887754220 001 1112333 66777777763 25
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCC-CCCC---CCCCHHHHHHHHHH
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLG---TTMSRNELNLLVNI 219 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG---~~~s~e~l~~l~~~ 219 (469)
.+.+++.+++......++..+ ++|.. .+.+ .-++.+++++..+.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIV-LANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEE-EECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 677777776654444467754 44442 2222 23577887777663
No 265
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=67.19 E-value=37 Score=30.60 Aligned_cols=104 Identities=10% Similarity=0.145 Sum_probs=64.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+-.-+++|.|++..=..+...|.+.|-.|++.+-.-..... .++.. |.++..+.+|- -|.+++++.+++..
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv-----t~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADV-----SKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 34456666666655556666777889888876543222222 23334 78888888763 26788888777665
Q ss_pred hcCCceeEEEEecCC--CCCC--CCCCHHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS--NPLG--TTMSRNELNLLVNII 220 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~--NPtG--~~~s~e~l~~l~~~~ 220 (469)
++-.+... +++|-. .+.+ .-++.++++++.++-
T Consensus 80 ~~~G~iDi-LVNNAGi~~~~~~~~~~~~e~~~~~~~vN 116 (254)
T 4fn4_A 80 ETYSRIDV-LCNNAGIMDGVTPVAEVSDELWERVLAVN 116 (254)
T ss_dssp HHHSCCCE-EEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCcccCCCCChhhCCHHHHHHHHHHH
Confidence 55456774 556552 2334 246888998888754
No 266
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=66.79 E-value=36 Score=30.28 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=55.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++.......
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDV-----SSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345666666555555566677788888877654322222223333 55555666552 256777777765443334
Q ss_pred ceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
++..+| +|. ..+.+. ..+.+++++..+.
T Consensus 80 ~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 80 TLNVLV-NNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp SCCEEE-ECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCcccCCHHHHHHHHHh
Confidence 566544 443 222222 3466777666653
No 267
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=65.82 E-value=46 Score=30.08 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=58.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+.+|- -|.+.+++.+++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDV-----RAPPAVMAAVDQAL 100 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345677777665556667778888988877654432222221 123 66777777663 25677777776654
Q ss_pred hcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
....++..+ ++|.. .+.+ ..++.+++++..+.
T Consensus 101 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 101 KEFGRIDIL-INCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCcCCCCCCcccCCHHHHHHHHHH
Confidence 444467754 44442 2222 23577777776663
No 268
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=65.75 E-value=30 Score=30.73 Aligned_cols=99 Identities=10% Similarity=0.170 Sum_probs=53.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.......... .++..+.+|- -|.+.+++.+++......++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 76 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER--PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC--TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3667766665555666777788988887654332222222222 2233444442 25677777776554444467
Q ss_pred eEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 193 KGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 193 ~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
..+| +|. ..+.+. ..+.+++++..+.
T Consensus 77 d~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 77 DVLV-NNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEE-ECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7544 444 222222 3566777766653
No 269
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=65.23 E-value=27 Score=31.82 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=58.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-----------Cc-----ChH---HHHhhhCCCEEEEeeccCCCC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-----------YP-----GFD---RDLKWRTGVEIVPIQCTSLNG 170 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-----------y~-----~~~---~~~~~~~g~~~~~v~~~~~~~ 170 (469)
+...++||.|+...=..+...|.+.|..|++.+-. +. ... ..+... +.++..+.+|-
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv--- 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVTAEVDV--- 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT---
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEEEEcCC---
Confidence 34557777776655566667788889888775322 00 011 112223 56677777663
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCC-CCCCC---CCCHHHHHHHHHH
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLGT---TMSRNELNLLVNI 219 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG~---~~s~e~l~~l~~~ 219 (469)
-|.+.+++.+++......++.. +++|.. .+.+. ..+.+++++..+.
T Consensus 86 --~~~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 86 --RDYDALKAAVDSGVEQLGRLDI-IVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp --TCHHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHhCCCCE-EEECCcccCCCCccccCCHHHHHHHHHH
Confidence 2567777777665444446675 444442 22222 3577777776653
No 270
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=65.21 E-value=37 Score=30.24 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=54.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++......
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDV-----TIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345677766655555666777788888777543322222222222 44555555542 156777777765443334
Q ss_pred ceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
++..+| +|.. .+.+ ...+.+++++..+
T Consensus 79 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 79 SVDGLV-NNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCCEEE-ECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 566544 4432 2222 1346667666655
No 271
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=65.11 E-value=25 Score=31.77 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=58.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-h---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-F---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+....++||.|+...=..+...|.+.|..|++..-.-.. . ...+... |.++..+.+|- -|.+.+++.+++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~ 99 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADV-----SQESEVEALFAA 99 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHH
Confidence 344456676666655556667788889888764332111 1 1222333 66777777653 256777777766
Q ss_pred HHhcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
......++..+| +|. ..+.+ ...+.+++++..+.
T Consensus 100 ~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 100 VIERWGRLDVLV-NNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 544444667544 444 22222 23577777776663
No 272
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=64.63 E-value=34 Score=31.01 Aligned_cols=100 Identities=11% Similarity=0.161 Sum_probs=55.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++......++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-GDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4556555554445566677788888887654433333334444 55555555552 25677777776554444467
Q ss_pred eEEEEecCC--CCCC--CCCCHHHHHHHHHH
Q 043923 193 KGVLVTNPS--NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 193 ~~vvl~~P~--NPtG--~~~s~e~l~~l~~~ 219 (469)
.. +++|.. .+.+ .-++.+++++..+.
T Consensus 104 D~-lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DV-LFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CE-EEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 75 444442 2222 23577777776663
No 273
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=64.21 E-value=79 Score=28.17 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=60.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC---h---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG---F---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~---~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
++...++||.|+...=..+...|.+.|..|++..-.-.. . ...+... |.++..+.+|- -|.+.+++.+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~ 82 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDL-----SNEEEVAKLF 82 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCC-----CSHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHH
Confidence 344557777776665566777888899888875322111 1 1122233 67787777763 2567777777
Q ss_pred HHHHhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 183 QLAQKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
++......++..+| +|. ..+.+. -.+.+++++..+.
T Consensus 83 ~~~~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 83 DFAEKEFGKVDIAI-NTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHHHCSEEEEE-ECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 66544444677544 444 222232 3577777776653
No 274
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.00 E-value=47 Score=29.89 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=55.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-------Cc-----Ch---HHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-------YP-----GF---DRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-------y~-----~~---~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
....++||.|+...=..+...|.+.|..|++..-. |. .. ...+... |.++..+.+|- -|
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADV-----RD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCC-----CC
Confidence 34457777776655556667788889888765432 10 01 1112233 66777777663 26
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHH
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVN 218 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~ 218 (469)
.+.+++.+++......++..+| +|. ..+.+. +.+++++..+
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVV-ANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCC--CHHHHHHHHH
Confidence 6777777766544444677544 444 222222 5666666655
No 275
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=63.87 E-value=30 Score=31.27 Aligned_cols=103 Identities=11% Similarity=0.112 Sum_probs=57.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC--------C-----cChH---HHHhhhCCCEEEEeeccCCCCccc
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY--------Y-----PGFD---RDLKWRTGVEIVPIQCTSLNGFQI 173 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~--------y-----~~~~---~~~~~~~g~~~~~v~~~~~~~~~~ 173 (469)
+...++||.|+...=..+...|.+.|..|++..-. + .... ..+... +.++..+.+|- -
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVVDT-----R 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----T
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----C
Confidence 34456777766655566667788889888775321 1 0011 112223 66777777663 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
|.+.+++.+++......++..+ ++|. ..+.+. ..+.+++++..+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDII-VANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6677777776654443467754 4444 222222 3577777776663
No 276
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=63.51 E-value=58 Score=28.57 Aligned_cols=104 Identities=12% Similarity=0.139 Sum_probs=59.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++....-..... .+... +.++..+.+|- -|.+.+++.+++..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNI-----SDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 34456777666655556667777888888776543322222 22233 66676676653 26788888877665
Q ss_pred hcCCceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
....++..+|.+--..+.+. -.+.+++++..+.
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 55556776554322222222 3467777666653
No 277
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=62.65 E-value=27 Score=31.55 Aligned_cols=102 Identities=12% Similarity=0.174 Sum_probs=57.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC----hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG----FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-.-.. ....+... |.++..+.+|- -|.+.+++.+++..
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456666666555556667788889888774322111 11222333 66777777663 25677777776654
Q ss_pred hcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
....++..+ ++|. ..+.+. -++.+++++..+.
T Consensus 92 ~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDIA-VSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444466654 4444 223332 3477777776663
No 278
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=62.05 E-value=63 Score=29.18 Aligned_cols=104 Identities=12% Similarity=0.177 Sum_probs=59.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.+++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDV-----TQPDQVRGMLDQM 103 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHH
Confidence 3445677777766555566677888888887765543333222 2223 55666666553 2567777777765
Q ss_pred HhcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+| +|. ..+.+ .-.+.++++++.+.
T Consensus 104 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 104 TGELGGIDIAV-CNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44444677544 444 22222 23577777776653
No 279
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=61.76 E-value=36 Score=30.74 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=59.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC-cCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY-PGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y-~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++...++||.|+...=..+...|.+.|..|++..-.- ... ...+... |.++..+.+|- -|.+.+++.+++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHH
Confidence 4445677777766555666677888898877653211 111 1222333 66777777663 266778877776
Q ss_pred HHhcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
......++..+ ++|.. ...+ .-.+.+++++..+.
T Consensus 103 ~~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDIL-VNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54444466754 44442 2222 23577777776663
No 280
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=61.71 E-value=58 Score=29.34 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=58.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc------------Ch---HHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP------------GF---DRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~------------~~---~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
+...++||.|+...=..+...|.+.|..|++..-.-. .. ...+... |.++..+.+|- -|
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 82 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDV-----KD 82 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCC-----CC
Confidence 3445677766665555666778888988877543210 01 1112233 66777777653 25
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
.+.+++.+++......++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAI-TNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEE-ECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6777777766544444677544 4442 2222 23577777776653
No 281
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=61.68 E-value=65 Score=29.36 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=58.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH----HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD----RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...++||.|+...=..+...|.+.|..|++..-.-..-. ...... |.++..+.+|- -|.+.+++.+++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDL-----SDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 3445777777666556666778888888777643322111 112233 66777777663 2567777777665
Q ss_pred HhcCCceeEEEEecCC--CCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS--NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~--NPtG~--~~s~e~l~~l~~~ 219 (469)
.....++..+| +|.. .+.+. ..+.++++++.+.
T Consensus 120 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 120 VRQLGSLNILV-NNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHHSSCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 44444667544 4432 22221 2477777776663
No 282
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=61.50 E-value=60 Score=29.03 Aligned_cols=106 Identities=11% Similarity=0.101 Sum_probs=59.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---h-hCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---W-RTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++...++||.|+...=..+...|.+.|..|++..-.-........ . ..+.++..+.+|- -|.+.+++.++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 344567777776655566667788889888776543322222211 1 2133466666653 256777777765
Q ss_pred HHhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNII 220 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~~ 220 (469)
......++..+ ++|. ..+.+. -.+.+++++..+.-
T Consensus 81 ~~~~~g~id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~N 118 (265)
T 3lf2_A 81 CERTLGCASIL-VNNAGQGRVSTFAETTDEAWSEELQLK 118 (265)
T ss_dssp HHHHHCSCSEE-EECCCCCCCBCTTTCCHHHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 54443466654 4444 233332 35777877776643
No 283
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=61.37 E-value=57 Score=29.39 Aligned_cols=105 Identities=10% Similarity=0.137 Sum_probs=60.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++....-...... +... |.++..+.+|- -|.+.+++.+++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDV-----TSESEIIEAFARL 97 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 3444566766666555566677888898888765433222222 2223 66777777653 2667888877766
Q ss_pred HhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
.....++..+|.+--..+.+. ..+.+++++..+.
T Consensus 98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 555556775443322222222 3577777776653
No 284
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=60.46 E-value=39 Score=31.40 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=57.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC----------CcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY----------YPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETA 177 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~----------y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 177 (469)
...++||.|+...=..+...|.+.|..|++..-. -... ...+... |.++..+.+|- -|.++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~ 100 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGSNV-----ADWDQ 100 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECCCT-----TSHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHH
Confidence 3446666665555555666777889888775432 1111 1223333 67777777663 25677
Q ss_pred HHHHHHHHHhcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 178 IEEAYQLAQKRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 178 l~~~i~~~~~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
+++.+++......++.. +++|.. ...+ .-.+.+++++..+.
T Consensus 101 v~~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777665444346665 444442 2222 23577777776664
No 285
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=60.09 E-value=36 Score=30.65 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=58.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh----HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF----DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++...++||.|+...=..+...|.+.|..|++..-.-... ...+... |.++..+++|- -|.+.+++.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHH
Confidence 4445677776666555566677778888877655422211 1222333 66677777653 256777777766
Q ss_pred HHhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.....+++..+|.+-...+.+ ...+.+++++..+
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 544445677655432222222 2356777776665
No 286
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=59.47 E-value=39 Score=30.65 Aligned_cols=84 Identities=13% Similarity=0.059 Sum_probs=50.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++....-.......... +.++..+.+|- -|.+.+++.+++.....
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDV-----RSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHhc
Confidence 3445777777666556666778888988887765433333333333 66666676653 25677777776554443
Q ss_pred CceeEEEEecC
Q 043923 190 LKVKGVLVTNP 200 (469)
Q Consensus 190 ~~~~~vvl~~P 200 (469)
.++.. +++|.
T Consensus 78 g~iD~-lvnnA 87 (281)
T 3zv4_A 78 GKIDT-LIPNA 87 (281)
T ss_dssp SCCCE-EECCC
T ss_pred CCCCE-EEECC
Confidence 46665 44444
No 287
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=59.40 E-value=39 Score=30.59 Aligned_cols=103 Identities=13% Similarity=0.160 Sum_probs=57.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC--------Cc--C------hHHHHhhhCCCEEEEeeccCCCCccc
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY--------YP--G------FDRDLKWRTGVEIVPIQCTSLNGFQI 173 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~--------y~--~------~~~~~~~~~g~~~~~v~~~~~~~~~~ 173 (469)
+...++||.|+...=..+...|.+.|..|++..-. |. . ....+... |.++..+.+|- -
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~ 87 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDV-----R 87 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT-----T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCC-----C
Confidence 34456777666655556667788889888775421 11 0 11112233 66777777653 2
Q ss_pred CHHHHHHHHHHHHhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 174 TETAIEEAYQLAQKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 174 d~~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
|.+.+++.+++......++..+| +|. ..+.+. -++.+++++..+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVV-ANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHhh
Confidence 56777777766544444677544 444 222232 3477777776653
No 288
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=59.39 E-value=38 Score=29.58 Aligned_cols=100 Identities=19% Similarity=0.210 Sum_probs=56.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---h-hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---K-WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.+++|.|+...=..+...|.+.|..|++....-....... . .. |.++..+.+|- -|.+.+++.+++....
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDV-----SKAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEecc-----CCHHHHHHHHHHHHHh
Confidence 4667766665555666777788888877654433222221 1 23 66777777663 2567777766554333
Q ss_pred CCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 189 HLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 189 ~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
.+++..+| +|. ..+.+. ..+.+++++..+.
T Consensus 78 ~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 78 FGDVDVVV-ANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp HSSCSEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCccccccCcccCCHHHHHHHHHH
Confidence 34667544 444 233332 3477777776653
No 289
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=59.37 E-value=48 Score=29.36 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=55.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPT-PYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++.. ..-.... ...... +.++..+.+|- -|.+.+++.+++..
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNV-----GDWDSTKQAFDKVK 86 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCC-----CCHHHHHHHHHHHH
Confidence 34556665555544556667778888777643 2222222 222233 55666666552 26677887777665
Q ss_pred hcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
....++..+| +|.. .+.+ .-.+.+++++..+
T Consensus 87 ~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 87 AEVGEIDVLV-NNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HHTCCEEEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 5545677544 4442 2222 2356777776665
No 290
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=59.13 E-value=77 Score=28.64 Aligned_cols=104 Identities=11% Similarity=0.116 Sum_probs=59.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-FDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
....++||.|+...=..+...|.+.|..|++..-.-.. .... +....+.++..+.+|- -|.+++++.+++.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 34457777776665566667788889888876542211 1111 1111145666666653 2567788877765
Q ss_pred HhcCCceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
.....++..+| +|. ..+.+. -++.+++++..+.
T Consensus 99 ~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 99 ADRFGGADILV-NNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHHTSSCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 55445677544 444 222332 3477777776663
No 291
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=59.12 E-value=44 Score=30.02 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=53.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+++++.++.......
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADV-----SDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 345677766655555666777788888777653322222222222 34455555552 256777777765443334
Q ss_pred ceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
++..+|.+--..+.+ ...+.++++++.+
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 567544332222222 1245666666555
No 292
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=59.03 E-value=49 Score=29.66 Aligned_cols=104 Identities=10% Similarity=0.093 Sum_probs=55.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---h-hCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---W-RTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...++||.|+...=..+...|.+.|..|++..-.-........ . . +.++..+.+|-. |.+.+++.++..
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~-----~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLA-----EPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTT-----STTHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 34456666665555556667777888888776543322222211 1 3 666777776532 445666666544
Q ss_pred HhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+|.+--....+ .-.+.+++++..+.
T Consensus 93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 43334677554432222222 23567777766653
No 293
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=58.59 E-value=60 Score=28.95 Aligned_cols=102 Identities=8% Similarity=-0.004 Sum_probs=52.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++......
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345677766655555666777788888777543222122222222 22344455442 256777777765444334
Q ss_pred ceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
++..+|.+-...+.+. -.+.+++++..+
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5665443322222221 246677666655
No 294
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=58.37 E-value=54 Score=29.10 Aligned_cols=102 Identities=9% Similarity=0.029 Sum_probs=54.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---h--CCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---R--TGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
...++||.|+...=..+...|.+.|..|++..-.-......... . .+.++..+++|- -|.+.+++.+++.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHH
Confidence 34566766665555566677778888887765443322222211 1 014455555542 2567777777665
Q ss_pred HhcCCceeEEEEecC-CCCCC-CCCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SNPLG-TTMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG-~~~s~e~l~~l~~ 218 (469)
.....++..+| +|. ....+ ...+.+++++..+
T Consensus 82 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 82 HQKYGAVDILV-NAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHCCEEEEE-ECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHhcCCCCEEE-ECCCcCCCCCCCCCHHHHHHHHH
Confidence 44444677544 444 22222 2345566666555
No 295
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=58.23 E-value=59 Score=28.90 Aligned_cols=103 Identities=15% Similarity=0.249 Sum_probs=58.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+.+|- -|.+.+++.+++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNV-----TDEQHREAVIKAA 83 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 334456676666655556667777888888776543322222 12223 66777777653 2567777777655
Q ss_pred HhcCCceeEEEEecCC-C-CCCCCCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS-N-PLGTTMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~-N-PtG~~~s~e~l~~l~~ 218 (469)
.....++..+ ++|.. . +...-.+.+++++..+
T Consensus 84 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 84 LDQFGKITVL-VNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHHcCCCCEE-EECCCCCCCCCCCCCHHHHHHHHH
Confidence 4444466754 44442 2 2222467777777665
No 296
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=58.14 E-value=79 Score=28.11 Aligned_cols=102 Identities=16% Similarity=0.078 Sum_probs=57.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.++....
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDL-----SHSDAIAAFATGVLA 102 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHH
Confidence 34566666655555556667778888887765443322222 2223 66777777653 256777777766544
Q ss_pred cCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+|.+-.. .+.+. ..+.+++++..+
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 44467765544222 23332 356777766655
No 297
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=57.82 E-value=74 Score=28.46 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
....++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+.+|- -|.+.+++.++..
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDV-----SNYEEVKKLLEAV 93 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHH
Confidence 3445677766665555666777788888877654322111111 223 55666666653 2567777777654
Q ss_pred HhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+|.+-.....+ .-.+.++++++.+.
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 43334566544332222222 12466777666653
No 298
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=57.81 E-value=41 Score=31.25 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=57.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-------Cc-----Ch---HHHHhhhCCCEEEEeeccCCCCcccCH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-------YP-----GF---DRDLKWRTGVEIVPIQCTSLNGFQITE 175 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-------y~-----~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~ 175 (469)
...++||.|+...=..+...|.+.|..|++.+-. +. .. ...+... |.++..+.+|- -|.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADV-----RDL 119 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCH
Confidence 3456666666555556667788889888775322 10 01 1112233 66777777663 256
Q ss_pred HHHHHHHHHHHhcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 176 TAIEEAYQLAQKRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 176 ~~l~~~i~~~~~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
+.+++.+++......++.++ ++|. ..+.+ ..++.++++++.+.
T Consensus 120 ~~v~~~~~~~~~~~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDIL-VSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777776654444467754 4444 22223 23577777776653
No 299
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.46 E-value=62 Score=28.89 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=57.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCC-CEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTG-VEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
....++||.|+...=..+...|.+.|..|++..-.-...... +... + .++..+.+|- -|.+.+++.+++.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQTDV-----SDRAQCDALAGRA 82 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-SSSCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcEEEEEcCC-----CCHHHHHHHHHHH
Confidence 445567776666555566677778888887765433222222 2222 3 4566666653 2567777777655
Q ss_pred HhcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+| +|. ..+.+ ...+.+++++..+.
T Consensus 83 ~~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 83 VEEFGGIDVVC-ANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HHHHSCCSEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44444677544 444 22222 23577777776653
No 300
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=57.26 E-value=60 Score=28.89 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... ..++..+.+|- -|.+.+++.+++.....
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-ENGGFAVEVDV-----TKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-TTCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hcCCeEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 3345777766655555666777788888877543222122222211 22334444442 25677777776544333
Q ss_pred CceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+| +|.. .+.+ .-.+.+++++..+
T Consensus 85 g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 85 GGFDLLC-ANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp TCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 4566544 4432 2222 2346677766655
No 301
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=57.04 E-value=87 Score=27.24 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---h-hCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---W-RTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
....+++|.|+...=..+...|.+.|..|++..-.-........ . . +.++..+..|- -|.+.+++.+++.
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNL-----LSEESINKAFEEI 79 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccC-----CCHHHHHHHHHHH
Confidence 34456676665555555666777788877765432211111111 1 2 55666666552 2667888877765
Q ss_pred HhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.....++..+|.+-...+.+ ...+.+++++..+
T Consensus 80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 44444667655432222222 1245566655554
No 302
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=57.03 E-value=83 Score=27.92 Aligned_cols=103 Identities=14% Similarity=0.090 Sum_probs=57.3
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcCh-HHH---H-hhhCCCEEEEeeccCCCCcccCHHHHHHHH
Q 043923 110 DTSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPGF-DRD---L-KWRTGVEIVPIQCTSLNGFQITETAIEEAY 182 (469)
Q Consensus 110 ~~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~---~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 182 (469)
+...++||.|+ ...=..+...|.+.|..|++..-.-..- ... + ... +.++..+.+|- -|.+.+++.+
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~v~~~~ 92 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQV-----DSYESCEKLV 92 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCC-----CCHHHHHHHH
Confidence 44556776655 3333345566777888887765443322 111 1 223 66777777663 2677888877
Q ss_pred HHHHhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 183 QLAQKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
++......++..+|.+-...+.+ .-.+.+++++..+
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 76655555677654332222222 2346777766665
No 303
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=56.94 E-value=88 Score=27.44 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=56.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC-cCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY-PGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y-~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..+++|.|+...=..+...|.+.|..|++..-.- ... ...+... |.++..+.+|- -|.+.+++.+++...
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANV-----ADADEVKAMIKEVVS 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3466666665555566677788898887643322 111 1222333 66777777653 266777777766544
Q ss_pred cCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
...++..+| +|. ..+.+ ...+.+++++..+.
T Consensus 79 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 79 QFGSLDVLV-NNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp HHSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444667544 444 22222 23577777776653
No 304
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=56.91 E-value=55 Score=29.21 Aligned_cols=102 Identities=14% Similarity=0.198 Sum_probs=57.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...++||.|+...=..+...|.+.|..|++. ...-..... .+... |.++..+.+|- -|.+.+++.+++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADL-----TNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 34457777766655556667787888888775 332222211 12223 55666666553 2567777777665
Q ss_pred HhcCCceeEEEEecC-CC-CCCC--CCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNP-SN-PLGT--TMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~N-PtG~--~~s~e~l~~l~~ 218 (469)
.....++..+| +|. .. +.+. .++.+++++..+
T Consensus 81 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 81 ADKFGEIHGLV-HVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHHCSEEEEE-ECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHhCCCCEEE-ECCCccCCCCChhhCCHHHHHHHHH
Confidence 44444666544 443 22 2222 457777776665
No 305
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=56.59 E-value=64 Score=29.56 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=58.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.++...
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDV-----RHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHH
Confidence 344577776666555566677778888888765443322222 2223 56676676653 25677777776554
Q ss_pred hcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
....++.++| +|.. .+.+. ..+.+++++..+
T Consensus 104 ~~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 104 RLLGGVDVVF-SNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHHSSCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhCCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 4434666544 4442 22232 356777776665
No 306
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=56.14 E-value=52 Score=29.32 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=56.1
Q ss_pred CCCcEEEeCCh-HHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGA-TSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 110 ~~~~i~~t~G~-~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
+...++||.|+ +..=..+...|.+.|..|++..-.-....... ....+.++..+.+|- -|.+.+++.++..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHH
Confidence 34457777764 43334455666778888877654332222222 122134666666653 2567777777665
Q ss_pred HhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~~ 219 (469)
.+...++..+|.+--..+.+. -.+.+++++..+.
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 444446775444322222222 3477777766653
No 307
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=56.07 E-value=87 Score=28.07 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=56.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
.++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+.+|- -|.+.+++.++......
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 45666655554455666777888888776543222222 22233 66777777653 25677777776554444
Q ss_pred CceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
.++..+| +|. ..+.+. -++.+++++..+.
T Consensus 80 g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDVLV-NNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4677544 444 233332 3477777776663
No 308
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=55.37 E-value=80 Score=28.00 Aligned_cols=103 Identities=14% Similarity=0.224 Sum_probs=57.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-....... ... +.++..+.+|- -|.+.+++.+++...
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDV-----RNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TTCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 345666666555445566777788888877654332222222 222 55666666653 256777777766544
Q ss_pred cCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNII 220 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~~ 220 (469)
...++..+| +|.. .+.+ ..++.+++++..+.-
T Consensus 80 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~n 114 (257)
T 3imf_A 80 KFGRIDILI-NNAAGNFICPAEDLSVNGWNSVINIV 114 (257)
T ss_dssp HHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 444667544 4442 2222 235777877776643
No 309
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=55.00 E-value=81 Score=27.64 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=53.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEE-EEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEI-VPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~-~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++ ..+..|- -|.+.+++.++....
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~- 82 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADV-----TDAEAMTAAAAEAEA- 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCT-----TCHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEec-----CCHHHHHHHHHHHHh-
Confidence 3445777766655555666777778887777654322222222222 4344 4455442 256777777765433
Q ss_pred CCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
..++..+|.+-...+.+ ...+.+++++..+
T Consensus 83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 83 VAPVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred hCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 33566544432222222 2345666665554
No 310
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=54.95 E-value=71 Score=28.81 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=57.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.+++....
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDV-----TSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3466776666555566677778898887765432222222 2223 66676776653 2567777777655444
Q ss_pred CCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 189 HLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 189 ~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
..++..+ ++|. ..+.+ ...+.++++++.+.
T Consensus 99 ~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 99 FGPIGIL-VNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp HCSCCEE-EECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3466654 4444 22222 23577777766653
No 311
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=54.72 E-value=74 Score=29.62 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=55.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC--cC------hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY--PG------FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y--~~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
..++||.|+...=..+...|.+.|..|+...-.- .. ....+... +.++..+.+|- -|.+.++++++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dv-----td~~~v~~~~~ 79 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDV-----QSQVSVDRAID 79 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHH
Confidence 3466766666555566677888898887643211 11 11112223 56666666653 25677777777
Q ss_pred HHHhcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
+......++.. +++|.. .+.|. .++.++++++.+
T Consensus 80 ~~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 80 QIIGEDGRIDV-LIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHHSCCSE-EEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHH
Confidence 65444446775 444442 22222 346777766655
No 312
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=54.58 E-value=76 Score=28.27 Aligned_cols=103 Identities=12% Similarity=0.140 Sum_probs=59.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.+++..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDI-----TDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344577777766555566677778888888765433222222 2223 66777777653 25677887777655
Q ss_pred hcCCceeEEEEecC-C-CCCCC--CCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP-S-NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P-~-NPtG~--~~s~e~l~~l~~~ 219 (469)
....++..+| +|. . .+.+. ..+.+++++..+.
T Consensus 84 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 84 KAYGRVDVVI-NNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HHTSCCSEEE-ECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEEE-ECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 5445677544 443 2 12222 3567777776653
No 313
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=54.50 E-value=84 Score=27.65 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=55.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.+++...
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDV-----ADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34577777666655566677778888777654322211111 2222 55666666653 256777777765443
Q ss_pred cCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+|.+--..+.+. -.+.++++++.+
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3346665443322222232 346777776665
No 314
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=54.41 E-value=92 Score=27.59 Aligned_cols=103 Identities=9% Similarity=0.108 Sum_probs=54.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh---CCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR---TGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+++|- -|.+.+++.++...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVR 80 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445777776665555666777788887777543221111111110 044566666552 25677777776544
Q ss_pred hcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
....++..+| +|.. .+.+ .-.+.+++++..+
T Consensus 81 ~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADILV-NNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3334566544 4442 2222 1246667666555
No 315
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=54.14 E-value=61 Score=28.80 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=53.4
Q ss_pred CCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 109 FDTSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 109 ~~~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
.+...++||.|+ ...=..+...|.+.|..|++..-.-..- ....... + ++..+.+|- -|.+++++.++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv-----~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-G-SELVFPCDV-----ADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-T-CCCEEECCT-----TCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-C-CcEEEECCC-----CCHHHHHHHHH
Confidence 345567777765 3433455566777888777664331111 1111222 2 244444442 25677888777
Q ss_pred HHHhcCCceeEEEEecCC-CCC----CC---CCCHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPS-NPL----GT---TMSRNELNLLVN 218 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~-NPt----G~---~~s~e~l~~l~~ 218 (469)
.......++..+| +|.. .+. +. -.+.+++++..+
T Consensus 85 ~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 85 SLKTHWDSLDGLV-HSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHHHCSCEEEEE-ECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCccCccccccCccccccCHHHHHHHHh
Confidence 6655555677544 4442 221 22 256777766655
No 316
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=53.44 E-value=38 Score=34.18 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 204 LGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 204 tG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
.|..++.+|+++|++.|+++|+-||-
T Consensus 249 ~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 249 PGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp CCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 46689999999999999999998875
No 317
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=53.35 E-value=1e+02 Score=27.10 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=53.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc-ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP-GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
..++||.|+...=..+...|.+.|..|++..-.-. .....+... |.++..+++|- -|.+.+++.+++......
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-GVKAVHHPADL-----SDVAQIEALFALAEREFG 78 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT-SCCEEEECCCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhc-CCceEEEeCCC-----CCHHHHHHHHHHHHHHcC
Confidence 34667666555555666677788887776543221 111222223 55666666553 256777777765443334
Q ss_pred ceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
++..+| +|.. .+.+ ...+.++++++.+
T Consensus 79 ~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 79 GVDILV-NNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 566544 4432 2222 2246677666655
No 318
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=52.63 E-value=80 Score=27.31 Aligned_cols=99 Identities=11% Similarity=0.064 Sum_probs=48.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-...........++.++..++. |.+.+++.++.......++
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-------~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVR-------EEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTT-------CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCC-------CHHHHHHHHHHHHHHcCCC
Confidence 466666655544556666777887777654322212222222213444433322 5677777766543333356
Q ss_pred eEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 193 KGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 193 ~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
..+|.+-...+.+ ...+.+++++..+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 6544332222222 1246666665554
No 319
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=52.54 E-value=79 Score=28.78 Aligned_cols=103 Identities=9% Similarity=0.056 Sum_probs=58.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCc-C----hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYP-G----FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~-~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+...++||.|+...=..+...|.+.|..|++..-.-. . ....+... |.++..+.+|- -|.+.+++.+++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GRKAVLLPGDL-----SDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TCCEEECCCCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHH
Confidence 3445777777666556666778888988877543211 1 11122333 67777777653 256777777765
Q ss_pred HHhcCCceeEEEEecCCC--CCC--CCCCHHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPSN--PLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~N--PtG--~~~s~e~l~~l~~~ 219 (469)
......++..+| +|... +.+ .-++.+++++..+.
T Consensus 122 ~~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 122 AREALGGLDILA-LVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHHTCCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 544434677544 44422 222 23577787777664
No 320
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=52.33 E-value=1e+02 Score=27.68 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=50.2
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCC-cChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYY-PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y-~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+ +..=..+...|.+.|..|++..-.- ......+... +.++..+.+|- -|.+.+++.+++...
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAE-FNPAAVLPCDV-----ISDQEIKDLFVELGK 99 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGG-GCCSEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHh-cCCceEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456666644 2233345566667787777654332 1111122222 22344444442 256778877776655
Q ss_pred cCCceeEEEEecCCCCC----CCC---CCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPL----GTT---MSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPt----G~~---~s~e~l~~l~~ 218 (469)
...++..+|.+--..+. +.. .+.+++++..+
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHD 137 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHH
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHH
Confidence 44567765443222222 111 56666666555
No 321
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=52.06 E-value=35 Score=34.32 Aligned_cols=25 Identities=12% Similarity=0.363 Sum_probs=23.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 205 GTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 205 G~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
|-.++.+++++|++.|+++|+-||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6789999999999999999998885
No 322
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=52.03 E-value=89 Score=27.73 Aligned_cols=100 Identities=15% Similarity=0.207 Sum_probs=55.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.++||.|+...=..+...|.+.|..|++. ...-..... .+... |.++..+.+|- -|.+++++.++.....
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANV-----GQPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 46666665555556667777888887764 332221211 12223 66777777653 2667777777665444
Q ss_pred CCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 189 HLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 189 ~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
..++..+| +|. ..+.+ ...+.+++++..+.
T Consensus 80 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 80 FGRLDVFV-NNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HSCCCEEE-ECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44667544 444 22222 23577777766653
No 323
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=51.78 E-value=33 Score=31.25 Aligned_cols=80 Identities=9% Similarity=0.015 Sum_probs=47.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~---- 84 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDL-----QDLSSVRRFADGV---- 84 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCT-----TCHHHHHHHHHTC----
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCC-----CCHHHHHHHHHhc----
Confidence 3445777777665556666778788888887654433333333433 66777777653 2667777777642
Q ss_pred CceeEEEEecC
Q 043923 190 LKVKGVLVTNP 200 (469)
Q Consensus 190 ~~~~~vvl~~P 200 (469)
.++.. +++|.
T Consensus 85 ~~iD~-lv~nA 94 (291)
T 3rd5_A 85 SGADV-LINNA 94 (291)
T ss_dssp CCEEE-EEECC
T ss_pred CCCCE-EEECC
Confidence 24564 44444
No 324
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=51.70 E-value=1.1e+02 Score=27.47 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=57.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++. ...-.... ..+... |.++..+.+|- -|.+.+++.+++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADV-----SDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456777666655556667777888888764 22211111 122333 66777777663 25677777776654
Q ss_pred hcCCceeEEEEecC-CCCCC--CCCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNP-SNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~~ 219 (469)
....++..+ ++|. ..+.+ .-.+.++++++.+.
T Consensus 101 ~~~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 101 EAFGGVDVL-VNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HHHSCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 444467754 4444 22222 23567777766653
No 325
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=51.52 E-value=1e+02 Score=27.87 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=59.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+.+|- -|.+++++.+++..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADV-----SDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 3445677777665555666778888888877654332222222 222 56677777653 26677777777654
Q ss_pred hcCCceeEEEEecCC-C-CCC--CCCCHHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-N-PLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-N-PtG--~~~s~e~l~~l~~~ 219 (469)
....++..+ ++|.. . +.+ .-++.+++++..+.
T Consensus 101 ~~~g~iD~l-VnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 101 LKFGHLDIV-VANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HHHSCCCEE-EECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred HHhCCCCEE-EECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 444467754 44442 1 212 24577777776653
No 326
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=51.44 E-value=97 Score=27.01 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=51.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhC-CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT-GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
...+++|.|+...=..+...|.+.|..|++..-.-........... ..++..+.+|- -|.+.+++.++......
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 3456666665554455666777788777765432221222222110 12344444442 25677777776543333
Q ss_pred CceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+|.+-...+.+ ...+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3567555443222222 2346667666655
No 327
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=51.23 E-value=1.3e+02 Score=26.52 Aligned_cols=98 Identities=16% Similarity=0.100 Sum_probs=52.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...+++|.|+...=..+...|.+.|..|++..-.-.. ....... + + ..+.+|- -|.+++++.++.......
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-G-G-AFFQVDL-----EDERERVRFVEEAAYALG 76 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-T-C-EEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-h-C-CEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 3457777666555556667777888877765433222 3333333 3 2 3344432 156777777765443334
Q ss_pred ceeEEEEecC-CCCCCC--CCCHHHHHHHHH
Q 043923 191 KVKGVLVTNP-SNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~ 218 (469)
++..+| +|. ..+.+. ..+.+++++..+
T Consensus 77 ~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 77 RVDVLV-NNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 566544 444 222222 346667666655
No 328
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=51.22 E-value=80 Score=27.97 Aligned_cols=99 Identities=12% Similarity=0.102 Sum_probs=52.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC--hHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG--FDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
.++||.|+...=..+...|.+.|..|++..-.-.. .... +... |.++..+.+|- -|.+.+++.+++...
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDV-----TDKANFDSAIDEAAE 77 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 35666665554455666677778777765432221 1111 2222 55666666653 256777777765443
Q ss_pred cCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+ ++|.. .+.+. -.+.++++++.+
T Consensus 78 ~~g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 78 KLGGFDVL-VNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HHTCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 33456654 44442 22222 246677766655
No 329
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=51.19 E-value=1.1e+02 Score=26.73 Aligned_cols=104 Identities=10% Similarity=0.101 Sum_probs=58.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++....-...... +... +.++..+.+|- -|.+.+++.+++.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDV-----SDPESAKAMADRT 80 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHH
Confidence 3445577777766555566677778888887765433222222 2223 66777777653 2567777777655
Q ss_pred HhcCCceeEEEEecCCC----CCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSN----PLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~N----PtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+| +|..- +.+ ...+.+++++..+.
T Consensus 81 ~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 81 LAEFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp HHHHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 44444667544 44421 111 23577777666653
No 330
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=51.07 E-value=82 Score=28.28 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=56.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+.+|- -|.+.+++.+++...
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 3456666665555555666777888888776543222221 22233 55555555542 256777777765544
Q ss_pred cCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
...++.. +++|.. .+.+ ...+.+++++..+.
T Consensus 102 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 102 EFGALNV-LVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4446665 444442 2222 23577777776663
No 331
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=50.65 E-value=90 Score=27.94 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=51.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-...........+ +..+.+|- -|.+.+++.+++......
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG--AVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT--EEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34577776666555566677778888877754322112222222213 34444442 156777777765443334
Q ss_pred ceeEEEEecCC-C-CCCC--CCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-N-PLGT--TMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~-N-PtG~--~~s~e~l~~l~~ 218 (469)
++..+| +|.. . +.+. -.+.++++++.+
T Consensus 82 ~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDCVV-NNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 566544 4442 1 2221 246666666555
No 332
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=50.51 E-value=70 Score=28.49 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=56.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEE-E--ccCC------C-----cChHHHHhhhCCCEEEEeeccCCCCcccCHHHH
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFL-L--PTPY------Y-----PGFDRDLKWRTGVEIVPIQCTSLNGFQITETAI 178 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl-~--~~P~------y-----~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 178 (469)
-+++-+|+.....++..+. +.|-.|. + ..|. | ......+... |++.+.+++.... .-..+++
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~L-GIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARAL-GIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHH-TCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHc-CCCEEEEECCCCc--hHHHHHH
Confidence 4667788887777666554 4454442 2 1111 1 1122345555 9988888765321 1235666
Q ss_pred HHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 179 EEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 179 ~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
.+++.+. .+.+++ +|.+++..+...+-+.|.+.|+..+
T Consensus 83 ~~~l~~~-----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 83 KRVLSGL-----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHTTS-----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 6666532 344444 8999998999999999999987654
No 333
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=50.45 E-value=1.1e+02 Score=27.47 Aligned_cols=102 Identities=10% Similarity=0.065 Sum_probs=54.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh--CCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR--TGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
....++||.|+...=..+...|.+.|..|++..-.-.......... .| ++..+.+|- -|.+.+++.+++...
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGE 101 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 3345677766655555666677788888877653322222222211 13 555565552 256777777766544
Q ss_pred cCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
...++..+| +|.. ...+ .-.+.+++++..+
T Consensus 102 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 102 LSARLDILV-NNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp HCSCCSEEE-ECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 444667544 4442 2222 1246667766655
No 334
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=50.32 E-value=99 Score=27.34 Aligned_cols=101 Identities=11% Similarity=0.096 Sum_probs=53.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHHHhhh---CCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPG-FDRDLKWR---TGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..++||.|+...=..+...|.+.|..|++..-.-.. ........ .|.++..+.+|- -|.+.+++.+++...
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 346666665555556666777888888776543222 21111110 144566666553 256777777765443
Q ss_pred cCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
...++..+| +|.. .+.+ ...+.+++++..+
T Consensus 80 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILV-NNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 334566544 4442 2222 1246677766665
No 335
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=49.79 E-value=1.2e+02 Score=26.41 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=54.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---Hhhh--CCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWR--TGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... ....++.++++. -|.+.+++.++..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~-----~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN-----ATAQQYRELAARV 88 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT-----CCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc-----CCHHHHHHHHHHH
Confidence 34566766665555566677778888887765443222222 1212 133444444431 2567777766655
Q ss_pred HhcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
.....++..+|.+-.. .+.+ ...+.+++++..+.
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 4433466754433222 2322 23467777766653
No 336
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=49.74 E-value=1.4e+02 Score=26.68 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=54.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
..++||.|+...=..+...|.+.|..|++..-.-..... .+... +.++..+.+|- -|.+.+++.+++....
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDV-----SKKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCC-----CCHHHHHHHHHHHHHh
Confidence 356777666555556667788889888774322111111 12222 55666666553 2567788877665444
Q ss_pred CCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
..++..+|.+-...+.+ ...+.+++++..+
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 44667554432222222 2246666666554
No 337
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=49.73 E-value=1e+02 Score=27.22 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=53.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
.+++|.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+++|- -|.+.+++.+++.....
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDV-----SDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 35666665554455666777788877775432211111 12222 55566666553 25677777776654444
Q ss_pred CceeEEEEecC-CCCCCC--CCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~ 218 (469)
.++..+| +|. ..+.+. ..+.++++++.+
T Consensus 78 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 78 GGFDVIV-NNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp TCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 4667544 444 222222 246677766655
No 338
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=49.58 E-value=1.4e+02 Score=26.65 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=56.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|-. |.+.++..++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----~~~~~~~~~~~~ 104 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDLS-----EAGAGTDLIERA 104 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCTT-----STTHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecCC-----CHHHHHHHHHHH
Confidence 3445577777666555666677878888887765433332222 2223 666666666532 345566655544
Q ss_pred HhcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
... .++..+| +|.. .+.+. -.+.+++++..+
T Consensus 105 ~~~-g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 105 EAI-APVDILV-INASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HHH-SCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHh-CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 333 3666544 4442 22222 357777776665
No 339
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=48.73 E-value=88 Score=28.90 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=56.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... +. ++..+.+|- -|.+.++++++..
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDV-----ASREGFKMAADEV 81 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCC-----CCHHHHHHHHHHH
Confidence 34567766655554556667778888887765443222222 2222 32 566666653 2567788777765
Q ss_pred HhcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~~ 219 (469)
....+++.++ ++|.. .+.+. ..+.++++++.+.
T Consensus 82 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 82 EARFGPVSIL-CNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HHHTCCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHhCCCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 5544567754 44442 22222 2466777666653
No 340
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=48.61 E-value=71 Score=28.08 Aligned_cols=100 Identities=11% Similarity=0.173 Sum_probs=53.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..+++|.|+...=..+...|.+.|..|++..- .-..... .+... |.++..+++|- -|.+++++.+++...
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADV-----ANAEDVTNMVKQTVD 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34666666555445566677788887776543 2111111 12222 55666666653 256777777765443
Q ss_pred cCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. .+.+. -.+.+++++..+
T Consensus 79 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 79 VFGQVDILV-NNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HHSCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 334566544 4432 22222 246677766665
No 341
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=48.48 E-value=1.2e+02 Score=27.19 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=54.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+.+|- -|.+++++.+++...
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDV-----RSVPEIEALVAAVVE 95 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 3456777666555556666777788777765432221111 12222 55566666553 256777777766544
Q ss_pred cCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. .+.+. -.+.+++++..+
T Consensus 96 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 96 RYGPVDVLV-NNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp HTCSCSEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 444666544 4442 22221 246667666655
No 342
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=48.23 E-value=44 Score=29.71 Aligned_cols=98 Identities=16% Similarity=0.098 Sum_probs=54.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-. -....... +.++..+.+|- -|.+.+++.++.... ..
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~-~g 78 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL-GDRARFAAADV-----TDEAAVASALDLAET-MG 78 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHHHHT-CTTEEEEECCT-----TCHHHHHHHHHHHHH-HS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH-hC
Confidence 3456676666555556667777888877776532 22333334 66666666653 256777776664433 34
Q ss_pred ceeEEEEecCC-CCCCC------CCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLGT------TMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG~------~~s~e~l~~l~~~ 219 (469)
++..+| +|.. .+.+. .++.+++++..+.
T Consensus 79 ~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 79 TLRIVV-NCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp CEEEEE-ECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 666544 4332 11111 2577777776663
No 343
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=47.77 E-value=1.1e+02 Score=27.14 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=53.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---h-CCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---R-TGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-.-......... . .+.++..+.+|- -|.+.+++.+++..
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTATT 87 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHHH
Confidence 34567776665555566677778888777654322211111111 0 044566666552 25677777776544
Q ss_pred hcCCceeEEEEecCC-CCC-C--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPL-G--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPt-G--~~~s~e~l~~l~~ 218 (469)
....++..+ ++|.. .+. + ...+.+++++..+
T Consensus 88 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 88 ERFGRIDGF-FNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHHSCCSEE-EECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCcCCCCCCcccCCHHHHHHHHH
Confidence 333456654 44442 111 2 1246677766655
No 344
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=47.68 E-value=1.2e+02 Score=27.27 Aligned_cols=103 Identities=15% Similarity=0.192 Sum_probs=57.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCC---EEEEeeccCCCCcccCHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
....++||.|+...=..+...|.+.|..|++..-.-...... +... +. ++..+.+|- -|.+++++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 83 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL-GANGGAIRYEPTDI-----TNEDETARAVD 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CCSSCEEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEeCCC-----CCHHHHHHHHH
Confidence 344577777766555566677878888887765432222222 2222 33 666666653 25677777776
Q ss_pred HHHhcCCceeEEEEecCC--CCCC--CCCCHHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPS--NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~--NPtG--~~~s~e~l~~l~~~ 219 (469)
+......++..+| +|.. .+.+ .-.+.+++++..+.
T Consensus 84 ~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 84 AVTAWHGRLHGVV-HCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 6544444666544 4442 2222 23567777766653
No 345
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=47.47 E-value=1.3e+02 Score=27.24 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=54.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh---hCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW---RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-......... ..+.++..+.+|- -|.+.+++.++....
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIK 100 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHH
Confidence 34577776665555566677777888777765432222211111 0144555666552 256778877776544
Q ss_pred cCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
...++..+|.+-...+.+. ..+.+++++..+
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4446676544322222221 346666666555
No 346
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=47.09 E-value=1.3e+02 Score=25.85 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=38.1
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
++.. |.+++.+..+ ...+.+.+++.+. ++.+|.++.-. + .+.+.++++++.+++.+
T Consensus 112 l~~~-G~~v~~LG~~------vp~~~l~~~~~~~-----~~d~v~lS~~~-~----~~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 112 LESG-GFTVYNLGVD------IEPGKFVEAVKKY-----QPDIVGMSALL-T----TTMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHT-TCEEEECCSS------BCHHHHHHHHHHH-----CCSEEEEECCS-G----GGTHHHHHHHHHHHHTT
T ss_pred HHHC-CCEEEECCCC------CCHHHHHHHHHHc-----CCCEEEEeccc-c----ccHHHHHHHHHHHHhcC
Confidence 3444 9999877643 5678888887664 77877776432 2 23567888888888754
No 347
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=46.85 E-value=1.4e+02 Score=26.54 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-.. .. ++.++..++. |.+.+++.++.......
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~-~~~~~~~Dl~-------~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EA-KYDHIECDVT-------NPDQVKASIDHIFKEYG 73 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SC-SSEEEECCTT-------CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CC-ceEEEEecCC-------CHHHHHHHHHHHHHHcC
Confidence 3457777766665566667777888777765422111 11 3444443332 56777777765443334
Q ss_pred ceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
++..+|.+-...+.+. ..+.++++++.+
T Consensus 74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 74 SISVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5675443322222232 246677766665
No 348
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=46.63 E-value=81 Score=28.23 Aligned_cols=99 Identities=19% Similarity=0.197 Sum_probs=53.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.- ..+.......+..+.+|- -|.+.+++.++.......
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH----HHHHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCC
Confidence 34566766666555566677778887777654321 112211122344455442 256777777765544444
Q ss_pred ceeEEEEecC-CCCCCC--CCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNP-SNPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~~ 219 (469)
++..+| +|. ..+.+. ..+.++++++.+.
T Consensus 87 ~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 117 (266)
T 3p19_A 87 PADAIV-NNAGMMLLGQIDTQEANEWQRMFDV 117 (266)
T ss_dssp SEEEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 677544 444 222222 3567777766653
No 349
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=46.39 E-value=82 Score=28.46 Aligned_cols=86 Identities=15% Similarity=0.083 Sum_probs=44.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCC-cChHHH---Hh-hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYY-PGFDRD---LK-WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y-~~~~~~---~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
..++||.|+...=..+...|.+.|..|++..-.- ...... +. .. |.++..+.+|-.+ ..-..+.+++.++...
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~-~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTN-SNVLPASCEEIINSCF 101 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSC-STTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCC-ccCCHHHHHHHHHHHH
Confidence 3466666655555566667777887777654332 212111 11 22 5566666665311 0000677777766544
Q ss_pred hcCCceeEEEEecC
Q 043923 187 KRHLKVKGVLVTNP 200 (469)
Q Consensus 187 ~~~~~~~~vvl~~P 200 (469)
....++.++| +|.
T Consensus 102 ~~~g~iD~lv-nnA 114 (288)
T 2x9g_A 102 RAFGRCDVLV-NNA 114 (288)
T ss_dssp HHHSCCCEEE-ECC
T ss_pred HhcCCCCEEE-ECC
Confidence 3334666544 444
No 350
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=45.94 E-value=1.7e+02 Score=26.45 Aligned_cols=109 Identities=8% Similarity=0.071 Sum_probs=57.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEccCCCcChHHHHhh-hCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPG--EAFLLPTPYYPGFDRDLKW-RTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~P~y~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++++.|++..-++.+...+..++..+. ..|+........-...... .....+..+.-+. +-.+.++..+...+..
T Consensus 154 id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~--D~~Vp~~~~~~~~~~L 231 (285)
T 4fhz_A 154 LPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDA--DPVVPFADMSLAGEAL 231 (285)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETT--CSSSCTHHHHHHHHHH
T ss_pred CCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhhhhhhcCcccceeeCC--CCCcCHHHHHHHHHHH
Confidence 688899886666666555555544443 3455444333222222221 1134444443332 2234555555554444
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
.+.+.++...++. . .|..++.++++.+.++.+++
T Consensus 232 ~~~g~~~~~~~y~--g--~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 232 AEAGFTTYGHVMK--G--TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHTTCCEEEEEET--T--CCSSCCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEEC--C--CCCCCCHHHHHHHHHHHHHH
Confidence 4445555544443 2 35557899999999988874
No 351
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=45.91 E-value=1.6e+02 Score=25.99 Aligned_cols=102 Identities=13% Similarity=0.106 Sum_probs=52.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh----CCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR----TGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+.+|- -|.+.+++.+++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKAR 81 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHHH
Confidence 345677766655555666777778888777543322111111111 022555555542 25677887777654
Q ss_pred hcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
.... +..+|.+-...+.+. ..+.+++++..+
T Consensus 82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4433 665443322222222 246667666554
No 352
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=45.30 E-value=1.7e+02 Score=26.10 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=56.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.++...
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDL-----LSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 344577776666555666677778888777754332212111 2222 55666666653 25677777776554
Q ss_pred hcC-CceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 187 KRH-LKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~-~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
..- .++..+| +|.. .+.+ ...+.++++++.+
T Consensus 94 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 94 HVFDGKLNILV-NNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HHTTSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 433 4667544 4442 2222 2356777776665
No 353
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.18 E-value=95 Score=27.87 Aligned_cols=101 Identities=12% Similarity=0.163 Sum_probs=52.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |. ++..+.+|- -|.+.+++.+++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 79 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADV-----TTEDGQDQIINS 79 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecC-----CCHHHHHHHHHH
Confidence 34566666665555566667778888877754332212211 1112 33 555566553 256777777765
Q ss_pred HHhcCCceeEEEEecCC-CCCC------CCCCHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPS-NPLG------TTMSRNELNLLVN 218 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~-NPtG------~~~s~e~l~~l~~ 218 (469)
......++..+| +|.. .+.+ .-.+.+++++..+
T Consensus 80 ~~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 80 TLKQFGKIDVLV-NNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HHHhcCCCCEEE-ECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 443334566544 4442 2222 1346666666655
No 354
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=44.74 E-value=1.5e+02 Score=25.90 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=54.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++....-.... ..+... +.++..+.+|- -|.+.+++.+++..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDV-----TNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 3445777766655555666677778888777653322111 112222 55566666553 25677777776544
Q ss_pred hcCCceeEEEEecCCCC-CCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNP-LGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NP-tG~--~~s~e~l~~l~~ 218 (469)
....++..+|.+-...+ .+. -.+.+++++..+
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 33345676554422222 222 245666655554
No 355
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=44.61 E-value=41 Score=29.60 Aligned_cols=119 Identities=10% Similarity=0.085 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHhcCCCCEEEEccCCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEE
Q 043923 120 ATSANETLMFCLAEPGEAFLLPTPYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVL 196 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vv 196 (469)
+++++..+.+. ...|..+++..|.-..- ..+.... |.....++++.. +++...+.. +...|+
T Consensus 42 TT~Llr~~~r~-~~~g~kvli~kp~~D~R~~~~~I~Sr~-G~~~~a~~v~~~-------~di~~~i~~------~~dvV~ 106 (219)
T 3e2i_A 42 SEELIRRLRRG-IYAKQKVVVFKPAIDDRYHKEKVVSHN-GNAIEAINISKA-------SEIMTHDLT------NVDVIG 106 (219)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEEEEC-----------CBT-TBCCEEEEESSG-------GGGGGSCCT------TCSEEE
T ss_pred HHHHHHHHHHH-HHcCCceEEEEeccCCcchhhhHHHhc-CCceeeEEeCCH-------HHHHHHHhc------CCCEEE
Confidence 45677766444 45677788888754332 1233333 766665655422 112111111 556667
Q ss_pred EecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhhccccccCCcCCeEEEEcc
Q 043923 197 VTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILKDRNCENTQVWNRVHIVYS 269 (469)
Q Consensus 197 l~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~i~S 269 (469)
+. -++.++.+.++.+.+++ ..|+.||+=.--.+ |.+.+|.....+++ ..+.+.-+.+
T Consensus 107 ID-----EaQFf~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~~F~~~~~Ll~--------~Ad~v~kl~a 163 (219)
T 3e2i_A 107 ID-----EVQFFDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGEPFEPMPKLMA--------VSEQVTKLQA 163 (219)
T ss_dssp EC-----CGGGSCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSCBCTTHHHHHH--------HCSEEEEECE
T ss_pred Ee-----chhcCCHHHHHHHHHHH-HCCCEEEEeecccc--cccCCCccHHHHHH--------hcceEEEeee
Confidence 66 44557777788888888 68999998776665 67777877777776 3355555543
No 356
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=44.57 E-value=86 Score=29.06 Aligned_cols=75 Identities=16% Similarity=0.104 Sum_probs=40.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhh------CCCEEEEeeccCCCCcccCHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWR------TGVEIVPIQCTSLNGFQITETAIEE 180 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~------~g~~~~~v~~~~~~~~~~d~~~l~~ 180 (469)
....|+||.|+.-.=..++..|.+.|..|.+..-.-....... ... .+++++..++. |.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR-------DLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT-------CHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC-------CHHHHHH
Confidence 4567888776544444555667777877766543222222111 110 15555554432 5677777
Q ss_pred HHHHHHhcCCceeEEEEe
Q 043923 181 AYQLAQKRHLKVKGVLVT 198 (469)
Q Consensus 181 ~i~~~~~~~~~~~~vvl~ 198 (469)
+++ ++..||-+
T Consensus 97 ~~~-------~~d~Vih~ 107 (351)
T 3ruf_A 97 VMK-------GVDHVLHQ 107 (351)
T ss_dssp HTT-------TCSEEEEC
T ss_pred Hhc-------CCCEEEEC
Confidence 765 56666544
No 357
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.47 E-value=1.2e+02 Score=26.94 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=46.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.+++..
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 344577776665555566667777888777755332212211 2222 55566666553 25677777776654
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
....++..+|.+
T Consensus 104 ~~~g~iD~li~~ 115 (272)
T 1yb1_A 104 AEIGDVSILVNN 115 (272)
T ss_dssp HHTCCCSEEEEC
T ss_pred HHCCCCcEEEEC
Confidence 444466755443
No 358
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=44.43 E-value=1.1e+02 Score=26.69 Aligned_cols=100 Identities=5% Similarity=0.044 Sum_probs=50.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.+++|.|+...=..+...|.+.|..|++..-.-....... ... +.++..+.+|- -|.+.+++.+++....
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADV-----ADEGDVNAAIAATMEQ 77 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 3566666555445566667777877776553322222111 111 44455555542 2567777777654433
Q ss_pred CCceeEEEEecCCCCCCC-----CCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLGT-----TMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~-----~~s~e~l~~l~~ 218 (469)
..++..+|.+-...+.+. ..+.+++++..+
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 345665444322222221 235666665554
No 359
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=44.40 E-value=1.5e+02 Score=26.77 Aligned_cols=103 Identities=15% Similarity=0.210 Sum_probs=53.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh-------CCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR-------TGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-------~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+.+|- -|.+.++..++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHH
Confidence 345777766655555666677778877777543322111111110 145566666553 25677777776
Q ss_pred HHHhcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.......++..||.+--..+.+ ...+.+++++..+
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 5433333566544332222222 2245666665554
No 360
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=44.34 E-value=1.7e+02 Score=25.81 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=56.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
+...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+++++.++...
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDL-----SSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344577777766555566677778888777654322111111 2223 56676676653 25677777776554
Q ss_pred hcC-CceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 187 KRH-LKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~-~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
... .++..+| +|.. .+.+ ...+.++++++.+
T Consensus 82 ~~~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 82 NHFHGKLNILV-NNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HHTTTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 433 4677544 4442 2222 2356677666655
No 361
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=44.24 E-value=1.6e+02 Score=25.70 Aligned_cols=96 Identities=6% Similarity=0.107 Sum_probs=52.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-. .... ++..+..++. |.+.+++.+++.....
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-----~~~~-~~~~~~~D~~-------d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----QEQY-PFATEVMDVA-------DAAQVAQVCQRLLAET 72 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC-----SSCC-SSEEEECCTT-------CHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh-----hhcC-CceEEEcCCC-------CHHHHHHHHHHHHHHc
Confidence 3345677766655555666777788887776543221 1222 4444433322 5677887777654444
Q ss_pred CceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
.++..+| +|.. .+.+ ...+.+++++..+.
T Consensus 73 g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 2fwm_X 73 ERLDALV-NAAGILRMGATDQLSKEDWQQTFAV 104 (250)
T ss_dssp SCCCEEE-ECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4677544 4432 2222 23467777766653
No 362
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=43.72 E-value=1.5e+02 Score=26.19 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=54.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+++|- -|.+.+++.++....
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDV-----TSEEAVIGTVDSVVR 80 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3456777666655556667777888877765432211111 12222 55666666653 256777777765443
Q ss_pred cCCceeEEEEecCC-C-CCCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-N-PLGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-N-PtG~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. . +.+. -.+.+++++..+
T Consensus 81 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 81 DFGKIDFLF-NNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HHSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCCCCCCCCccccCCHHHHHHHHH
Confidence 334566544 4432 2 2221 246677766655
No 363
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=43.61 E-value=1.6e+02 Score=25.96 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=51.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCC--EEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGV--EIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... +. ++..+.+|- -|.+.+++.+++....
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI-GSPDVISFVHCDV-----TKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CCTTTEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh-CCCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 345777766665555666777778887777643221111122211 11 444555442 2567777777654333
Q ss_pred CCceeEEEEecCCCC---CC--CCCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNP---LG--TTMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NP---tG--~~~s~e~l~~l~~ 218 (469)
..++..+| +|.... .+ ...+.+++++..+
T Consensus 90 ~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 90 HGKLDIMF-GNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp HSCCCEEE-ECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCcccCCCCCChhhCCHHHHHHHHH
Confidence 33566544 333211 11 2345566666555
No 364
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.53 E-value=91 Score=28.81 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=36.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 31 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDK--GLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 3468888888887755443 56665543 333344568888888888877653 355553
No 365
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=43.53 E-value=1.1e+02 Score=27.19 Aligned_cols=98 Identities=6% Similarity=0.062 Sum_probs=53.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
....++||.|+...=..+...|.+.|..|++..-.-... . ..++..+.+|- -|.+.+++.+++.....
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS------A-DPDIHTVAGDI-----SKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC------S-STTEEEEESCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc------c-cCceEEEEccC-----CCHHHHHHHHHHHHHHC
Confidence 344566766665555566677888898887765332211 1 22344455442 25677777776554444
Q ss_pred CceeEEEEecCCCCCC--CCCCHHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~~ 219 (469)
.++..+|.+--..+.+ .-.+.+++++..+.
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 126 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGV 126 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4677544432222222 23577777776653
No 366
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=43.51 E-value=1.7e+02 Score=26.03 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=52.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCC--CEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTG--VEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... | .++..+.+|- -|.+.+++.++..
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTLIPYRCDL-----SNEEDILSMFSAI 105 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-CCCceEEEEEecC-----CCHHHHHHHHHHH
Confidence 34567776655544556667777887777654322211111 1212 2 4555666552 2567777777654
Q ss_pred HhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
.....++..||.+-...+.+. ..+.+++++..+
T Consensus 106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 333335665544322222222 235666665554
No 367
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=43.46 E-value=1.6e+02 Score=26.55 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=54.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+.+++.++...
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDV-----TDEDGIQAMVAQIE 106 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEecC-----CCHHHHHHHHHHHH
Confidence 344577776665555566677778888777754322111111 2222 44555555542 25677777776654
Q ss_pred hcCCceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
....++..+| +|.. .+.+ .-.+.++++++.+
T Consensus 107 ~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 107 SEVGIIDILV-NNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HHTCCCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHcCCCcEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 4444567544 4442 2222 1246677766655
No 368
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=43.44 E-value=1.7e+02 Score=26.05 Aligned_cols=95 Identities=12% Similarity=0.111 Sum_probs=50.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-... .. ....+.+++. |.+.+++.+++.....
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~-~~~~~~~Dv~-------~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----VN-VSDHFKIDVT-------NEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----TT-SSEEEECCTT-------CHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----cC-ceeEEEecCC-------CHHHHHHHHHHHHHHc
Confidence 344566666665555566677778888887654321111 11 2333333322 5677777776554444
Q ss_pred CceeEEEEecC-CCCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNP-SNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P-~NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+| +|. ..+.+ ...+.+++++..+
T Consensus 80 g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 80 GRIDILV-NNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp SCCCEEE-ECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 4667544 444 22222 2356677666554
No 369
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=43.29 E-value=80 Score=28.54 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=53.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-........ ...+..+..+.+|- -|.+++++.++....
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3445666555544455666677888888876543322222221 11122234555542 256777777766544
Q ss_pred cCCceeEEEEecCC-C-CCC--CCCCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-N-PLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-N-PtG--~~~s~e~l~~l~~~ 219 (469)
...++..+ ++|.. . +.+ ...+.++++++.+.
T Consensus 108 ~~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 108 EFARLDLL-VNNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp HHSCCSEE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 44466754 44442 2 212 23577777777663
No 370
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=43.11 E-value=1.4e+02 Score=26.27 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=49.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhh--CC-------CEEEEeeccCCCCcccCHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWR--TG-------VEIVPIQCTSLNGFQITETAIEEA 181 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~--~g-------~~~~~v~~~~~~~~~~d~~~l~~~ 181 (469)
...++||.|+...=..+...|.+.|..|++..-.-.......... .| .++..+..|- -|.+.+++.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 345777766655555566677778877777643322122111111 01 2333444432 156777777
Q ss_pred HHHHHhcCCce-eEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 182 YQLAQKRHLKV-KGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 182 i~~~~~~~~~~-~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
++.......++ ..+ +++.. .+.+. ..+.+++++..+
T Consensus 82 ~~~~~~~~g~i~d~v-i~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 82 LEQVQACFSRPPSVV-VSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHSSCCSEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEE-EECCCcCCCcchhhCCHHHHHHHHh
Confidence 76543322344 554 44442 22221 246666665554
No 371
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=42.82 E-value=1.8e+02 Score=26.05 Aligned_cols=101 Identities=13% Similarity=0.134 Sum_probs=53.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh----HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF----DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-.-... ...+... |.++..+.+|- -|.+.++..+++..
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANV-----GVVEDIVRMFEEAV 102 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34466666555544566677778888777654322111 1112333 66666666653 25677777666543
Q ss_pred hcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
....++..+ ++|.. ...+. -.+.+++++..+
T Consensus 103 ~~~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 103 KIFGKLDIV-CSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 333356654 44442 22222 246677766665
No 372
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=42.66 E-value=93 Score=27.73 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=57.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..++||.|++..=..+...|.+.|-.|++.+-.-.... ... +.++..+.+|- -|.+++++.+++. .+
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~----g~ 78 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---APR-HPRIRREELDI-----TDSQRLQRLFEAL----PR 78 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---SCC-CTTEEEEECCT-----TCHHHHHHHHHHC----SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---hhh-cCCeEEEEecC-----CCHHHHHHHHHhc----CC
Confidence 45667766666556666778889988887654322211 122 55666666653 2567787777653 35
Q ss_pred eeEEEEecC-CCCCCCCCCHHHHHHHHHHH
Q 043923 192 VKGVLVTNP-SNPLGTTMSRNELNLLVNII 220 (469)
Q Consensus 192 ~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~ 220 (469)
... +++|- -+.....++.++++++.++-
T Consensus 79 iDi-LVNNAGi~~~~~~~~~~~w~~~~~vN 107 (242)
T 4b79_A 79 LDV-LVNNAGISRDREEYDLATFERVLRLN 107 (242)
T ss_dssp CSE-EEECCCCCCGGGGGSHHHHHHHHHHH
T ss_pred CCE-EEECCCCCCCcccCCHHHHHHHHHHh
Confidence 664 55554 23334456788888877743
No 373
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=42.55 E-value=1.7e+02 Score=25.93 Aligned_cols=100 Identities=11% Similarity=0.057 Sum_probs=52.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChH-H---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFD-R---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~-~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.++||.|+...=..+...|.+.|..|++..-.-.... . ..... +.++..+.+|- -|.+.+++.++.....
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDV-----ADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-TCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4556555554445566778888988777542221111 1 11222 55565666552 2567777777655444
Q ss_pred CCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
.+++..+|.+--....+. -.+.+++++..+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 346675443322222222 346777766655
No 374
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=42.47 E-value=1.8e+02 Score=25.74 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=54.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPT-PYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++.. ..-.... ..+... +.++..+.+|- -|.+.+++.+++..
T Consensus 26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 99 (267)
T 4iiu_A 26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-GGNGRLLSFDV-----ANREQCREVLEHEI 99 (267)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 34566666665555566677788898875532 2111111 122223 55666666553 25677777776554
Q ss_pred hcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
....++..+ ++|.. ...+. ..+.+++++..+
T Consensus 100 ~~~g~id~l-i~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 100 AQHGAWYGV-VSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HHHCCCSEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCccEE-EECCCCCCCCccccCCHHHHHHHHH
Confidence 444466654 44442 22222 357777776665
No 375
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=42.42 E-value=96 Score=27.66 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=54.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
.++||.|+...=..+...|.+.|..|++. ...-... ...+... +.++..+.+|- -|.+.+++.+++....
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDV-----GNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 45565555554455666777888887654 3222111 1222333 66777777663 2567777777665444
Q ss_pred CCceeEEEEecCC-CCC-C--CCCCHHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPS-NPL-G--TTMSRNELNLLVNI 219 (469)
Q Consensus 189 ~~~~~~vvl~~P~-NPt-G--~~~s~e~l~~l~~~ 219 (469)
.+++..+| +|.. ... + .-.+.+++++..+.
T Consensus 102 ~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 102 FGRLDGLV-NNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp HSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCCEEE-ECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 34666544 4442 211 2 12467777666653
No 376
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=42.38 E-value=82 Score=29.14 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=34.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||+
T Consensus 30 dg~iD~~~l~~lv~~li~~--Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQ--GCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3467888888777654433 45555443 333344567888888888877653 455554
No 377
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.01 E-value=94 Score=28.34 Aligned_cols=101 Identities=9% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCC---EEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGV---EIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |. ++..+.+|- -|.+.+++.+++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 99 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADV-----TEASGQDDIINT 99 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCC-----CCHHHHHHHHHH
Confidence 34566766665555566677778888887764332212111 1122 33 555566552 256777777765
Q ss_pred HHhcCCceeEEEEecCC-CCCCC----CCCHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPS-NPLGT----TMSRNELNLLVN 218 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~-NPtG~----~~s~e~l~~l~~ 218 (469)
......++..+| +|.. .+.+. ..+.+++++..+
T Consensus 100 ~~~~~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 100 TLAKFGKIDILV-NNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HHHhcCCCCEEE-ECCCcCcCCCCccccCCHHHHHHHHh
Confidence 443334566544 4442 22222 356677766655
No 378
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=41.91 E-value=1.7e+02 Score=26.31 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=57.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH---hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL---KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+.+|- -|.+.++..++....
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDV-----GDEALHEALVELAVR 81 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 345666666655555666777788988887654432222222 222 56677776653 256777777765544
Q ss_pred cCCceeEEEEecCC-C-CCCC--CCCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-N-PLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-N-PtG~--~~s~e~l~~l~~~ 219 (469)
...++.. +++|.. . +.+. ..+.+++++..+.
T Consensus 82 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 82 RFGGLDT-AFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp HHSCCCE-EEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 4346665 444442 1 2222 3577777776663
No 379
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=41.59 E-value=2.2e+02 Score=27.68 Aligned_cols=82 Identities=20% Similarity=0.160 Sum_probs=46.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-CCCEEEEccCCCcC---------------hHHHHhhhCCCEEEEeeccCCCCcccC
Q 043923 111 TSKIVLTAGATSANETLMFCLAE-PGEAFLLPTPYYPG---------------FDRDLKWRTGVEIVPIQCTSLNGFQIT 174 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~-~gd~Vl~~~P~y~~---------------~~~~~~~~~g~~~~~v~~~~~~~~~~d 174 (469)
+..++||.|++..=..+...|.. .|-.|++..-.-.. +...+... |.++..+.+|- -|
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dv-----td 134 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDA-----FS 134 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-----TS
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecC-----CC
Confidence 34456665555444445556666 78776654221111 11334445 88888888763 26
Q ss_pred HHHHHHHHHHHHhcC-CceeEEEEec
Q 043923 175 ETAIEEAYQLAQKRH-LKVKGVLVTN 199 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~-~~~~~vvl~~ 199 (469)
.+.+++.++.....- .++.++ ++|
T Consensus 135 ~~~v~~~v~~i~~~~~G~IDiL-VNN 159 (422)
T 3s8m_A 135 DAARAQVIELIKTEMGGQVDLV-VYS 159 (422)
T ss_dssp HHHHHHHHHHHHHHSCSCEEEE-EEC
T ss_pred HHHHHHHHHHHHHHcCCCCCEE-EEc
Confidence 688888877665554 577754 444
No 380
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=41.52 E-value=1.8e+02 Score=25.41 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=53.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHH----hhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDL----KWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..++||.|+...=..+...|.+.|..|++..-.-....... ... +.++..+.+|- -|.+.+++.++....
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDV-----SNTDIVTKTIQQIDA 88 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 35677766555555666677778877776543222222111 122 55566666552 256777777776544
Q ss_pred cCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
...++..+|.+--....+ ...+.+++++..+
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 444566544332222222 1246666665554
No 381
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=41.46 E-value=40 Score=36.23 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=23.7
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 203 PLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 203 PtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
|.|-.++.+++++|++.|+++++-||-
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 346789999999999999999998875
No 382
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=41.01 E-value=2.1e+02 Score=26.10 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=49.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.-.|+||.|+...=..++..|.+.|..|++..-.-...........+++++..++ .|.+.+++++++.
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl-------~d~~~~~~~~~~~----- 87 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSV-------TDAGLLERAFDSF----- 87 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCT-------TCHHHHHHHHHHH-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeC-------CCHHHHHHHHhhc-----
Confidence 3357777664444455666777778777665432211111111111444444332 2567788877643
Q ss_pred ceeEEEEecCCCCCCCCCCHHH---------HHHHHHHHHhcC
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNE---------LNLLVNIITEKN 224 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~---------l~~l~~~~~~~~ 224 (469)
++..||-+-.....+ +.++ ...+++.|.+.+
T Consensus 88 ~~D~vih~A~~~~~~---~~~~~~~~~N~~~~~~l~~a~~~~~ 127 (330)
T 2pzm_A 88 KPTHVVHSAAAYKDP---DDWAEDAATNVQGSINVAKAASKAG 127 (330)
T ss_dssp CCSEEEECCCCCSCT---TCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred CCCEEEECCccCCCc---cccChhHHHHHHHHHHHHHHHHHcC
Confidence 566655443322111 2122 346777777665
No 383
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=40.83 E-value=1.3e+02 Score=23.51 Aligned_cols=79 Identities=16% Similarity=0.069 Sum_probs=48.0
Q ss_pred CCCEEEEccCCCcChHHHHhhhCCCE---EEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCH
Q 043923 134 PGEAFLLPTPYYPGFDRDLKWRTGVE---IVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSR 210 (469)
Q Consensus 134 ~gd~Vl~~~P~y~~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~ 210 (469)
.+..|+.-.|.+..+...+... |+. ++.+...... -.+..+|++++. ....+ |+.-+. .++.
T Consensus 32 ~~r~ilwi~pp~~~~~~~L~~~-Gl~~~rll~v~~~~~~---d~lwa~EqaLrs-----g~~~a-Vl~wl~-----~l~~ 96 (119)
T 1ofu_X 32 DARWLTLIAPPASLTHEWLRRA-GLNRERILLLQAKDNA---AALALSCEALRL-----GRSHT-VVSWLE-----PLSR 96 (119)
T ss_dssp SSSEEEEESCCTTSCHHHHHHT-TCCTTSEEEECCSSHH---HHHHHHHHHHHH-----TCEEE-EEECCS-----SCCH
T ss_pred cCccEEEECCCCCCCHHHHHHc-CCChHHEEEEECCCcH---HHHHHHHHHHhc-----CCccE-EEECCC-----cCCh
Confidence 4556666677777788777766 764 5555543111 124666666665 14454 444432 2788
Q ss_pred HHHHHHHHHHHhcCeEE
Q 043923 211 NELNLLVNIITEKNIHL 227 (469)
Q Consensus 211 e~l~~l~~~~~~~~~~i 227 (469)
.+.++|-..|++.+...
T Consensus 97 ~~~RRLqlAA~~g~~~~ 113 (119)
T 1ofu_X 97 AARKQLSRAAQLGQAQS 113 (119)
T ss_dssp HHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHhCCCeE
Confidence 88999888888766543
No 384
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=40.74 E-value=1.8e+02 Score=25.21 Aligned_cols=103 Identities=11% Similarity=0.151 Sum_probs=53.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... +.++..+.+|- -|.+.+++.++...
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-----TSEQELSALADFAI 83 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34456676665554456667777888877765433211111 12222 44555566542 25677777776544
Q ss_pred hcCCceeEEEEecCCCCCC-CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLG-TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG-~~~s~e~l~~l~~ 218 (469)
....++..||.+-...+.+ .-.+.+++++..+
T Consensus 84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 3334667655432222111 1346666665554
No 385
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=40.72 E-value=54 Score=28.47 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=52.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
++||.|+...=..+...|.+.|..|++....-.......... +.++..+.+|- -|.+.+++.+++... ...
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~---~~d 74 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDL-----ASHQEVEQLFEQLDS---IPS 74 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCT-----TCHHHHHHHHHSCSS---CCS
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecC-----CCHHHHHHHHHHHhh---cCC
Confidence 677777666556666777788877777664433333333333 44555555442 256777777664211 224
Q ss_pred EEEEecCC-CCCCC--CCCHHHHHHHHHH
Q 043923 194 GVLVTNPS-NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 194 ~vvl~~P~-NPtG~--~~s~e~l~~l~~~ 219 (469)
++++|.. .+.+. ..+.+++++..+.
T Consensus 75 -~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 75 -TVVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp -EEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred -EEEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 3455542 23332 3577777776663
No 386
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=40.45 E-value=1.2e+02 Score=26.79 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=52.0
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 114 IVLTAGATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
+++|.|+...=..+...|.+. |..|++....-.......... |.++..+.+|- -|.+.+++.+++......+
T Consensus 5 ~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDI-----TEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp EEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred EEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCC-----CCHHHHHHHHHHHHHhcCC
Confidence 455555444334445556554 456665443332233333333 55666666653 2567777777665444446
Q ss_pred eeEEEEecCC--CCCCC--CCCHHHHHHHHHH
Q 043923 192 VKGVLVTNPS--NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 192 ~~~vvl~~P~--NPtG~--~~s~e~l~~l~~~ 219 (469)
+..+| +|.. .+.+. ..+.+++++..+.
T Consensus 79 id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 79 IDSLV-ANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp CCEEE-EECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred ccEEE-ECCcccCCCCCcccCCHHHHHHHHHH
Confidence 77544 4442 23232 3577777776663
No 387
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=39.85 E-value=85 Score=28.89 Aligned_cols=57 Identities=11% Similarity=0.197 Sum_probs=36.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|++++++.+.+. ++.||+
T Consensus 22 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIEN--GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3468888888877754433 56665543 343344667888888888877653 355554
No 388
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=39.66 E-value=1.2e+02 Score=26.77 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=51.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...+++|.|+...=..+...|.+.|..|++..- .-.... ..+... |.++..+.+|- -|.+.+++.+++..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADI-----SKPSEVVALFDKAV 94 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHH
Confidence 345666666554445566667778877776543 211111 112223 55666666553 25677777776543
Q ss_pred hcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
....++..+|.+-...+.+. ..+.+++++..+
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 33335665443322222221 245566555554
No 389
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=39.22 E-value=89 Score=26.65 Aligned_cols=68 Identities=7% Similarity=0.148 Sum_probs=37.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccC-HHHHHHHHHHHHhcCCce
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQIT-ETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~l~~~i~~~~~~~~~~ 192 (469)
|+||.|+...=..++..|.+.|..|.+..-.-.... ... +++++..++. | .+.+.++++ ++
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~-~~~~~~~D~~-------d~~~~~~~~~~-------~~ 64 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYN-NVKAVHFDVD-------WTPEEMAKQLH-------GM 64 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCT-TEEEEECCTT-------SCHHHHHTTTT-------TC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcC-CceEEEeccc-------CCHHHHHHHHc-------CC
Confidence 667665554455666777788877776543321111 112 5565554432 4 677777664 56
Q ss_pred eEEEEec
Q 043923 193 KGVLVTN 199 (469)
Q Consensus 193 ~~vvl~~ 199 (469)
..||.+-
T Consensus 65 d~vi~~a 71 (219)
T 3dqp_A 65 DAIINVS 71 (219)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 390
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=38.93 E-value=2e+02 Score=25.18 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=55.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHh---hhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLK---WRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-........ ...+.++..+.+|-.. -|.+.+++.++....
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIAV 88 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHHH
Confidence 3456777666655556667777888888876543322222211 1112234444443211 256777777766555
Q ss_pred cCCceeEEEEecCC--CCCC--CCCCHHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS--NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 188 ~~~~~~~vvl~~P~--NPtG--~~~s~e~l~~l~~~ 219 (469)
..+++..+| +|.. .+.+ ...+.+++++..+.
T Consensus 89 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 89 NYPRLDGVL-HNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp HCSCCSEEE-ECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred hCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHhh
Confidence 555677544 4442 2222 23577777776653
No 391
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.93 E-value=1.2e+02 Score=27.00 Aligned_cols=83 Identities=8% Similarity=0.107 Sum_probs=42.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhh-----hCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKW-----RTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~-----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
..++||.|+...=..+...|.+.|..|++..-.-......... ..+.++..+++|- -|.+.+++.++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILSTTL 81 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHHHHH
Confidence 3466665555444556667777888777654322111111111 0133455555542 25677777776544
Q ss_pred hcCCceeEEEEecC
Q 043923 187 KRHLKVKGVLVTNP 200 (469)
Q Consensus 187 ~~~~~~~~vvl~~P 200 (469)
....++..+| +|.
T Consensus 82 ~~~g~id~lv-~~A 94 (278)
T 1spx_A 82 GKFGKLDILV-NNA 94 (278)
T ss_dssp HHHSCCCEEE-ECC
T ss_pred HHcCCCCEEE-ECC
Confidence 3334566544 443
No 392
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=38.85 E-value=1.1e+02 Score=28.26 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=55.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCC--CcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLP-TPY--YPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~--y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
..|+||.|+-..=..++..|.+.|..|.+. ... ...-.. .+... |++++..++. |.+.+.+++++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~-~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK-GAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHT-TCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhC-CcEEEEeecC-------CHHHHHHHHhhC
Confidence 467777763333344555665666544443 322 111111 12233 7777766543 678888888743
Q ss_pred HhcCCceeEEEEecC-CCCCCCCCCHHHHHHHHHHHHhcC-eEEEEeccc
Q 043923 186 QKRHLKVKGVLVTNP-SNPLGTTMSRNELNLLVNIITEKN-IHLISDEIY 233 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P-~NPtG~~~s~e~l~~l~~~~~~~~-~~iI~Deay 233 (469)
++..||.+-. .|.. .-..+++.|++.+ +..++=..|
T Consensus 83 -----~~d~Vi~~a~~~n~~-------~~~~l~~aa~~~g~v~~~v~S~~ 120 (346)
T 3i6i_A 83 -----EIDIVVSTVGGESIL-------DQIALVKAMKAVGTIKRFLPSEF 120 (346)
T ss_dssp -----TCCEEEECCCGGGGG-------GHHHHHHHHHHHCCCSEEECSCC
T ss_pred -----CCCEEEECCchhhHH-------HHHHHHHHHHHcCCceEEeeccc
Confidence 5666665533 2322 3467889998888 544432334
No 393
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=37.87 E-value=74 Score=28.08 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=50.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCcee
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVK 193 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 193 (469)
+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+++|- -|.+.+++.++.......++.
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 456555444444555667778888777543322222222323 34455555552 256778877765433333566
Q ss_pred EEEEecCCC--CCC--CCCCHHHHHHHHH
Q 043923 194 GVLVTNPSN--PLG--TTMSRNELNLLVN 218 (469)
Q Consensus 194 ~vvl~~P~N--PtG--~~~s~e~l~~l~~ 218 (469)
. +++|..- +.+ ...+.+++++..+
T Consensus 77 ~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 77 I-LVNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp E-EEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred E-EEECCCcCCCCCchhhCCHHHHHHHHH
Confidence 5 4444421 112 2356677776665
No 394
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=37.55 E-value=1e+02 Score=26.30 Aligned_cols=70 Identities=11% Similarity=0.050 Sum_probs=38.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..|++|.|+...=..++..|.+.|..|.+..-.-..... .. . +++++..++ .|.+.++++++ +
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~-~-~~~~~~~Dl-------~d~~~~~~~~~-------~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-EN-E-HLKVKKADV-------SSLDEVCEVCK-------G 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-CC-T-TEEEECCCT-------TCHHHHHHHHT-------T
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-cc-C-ceEEEEecC-------CCHHHHHHHhc-------C
Confidence 357777665554455667777888777766543211100 00 2 444443332 26677887775 5
Q ss_pred eeEEEEe
Q 043923 192 VKGVLVT 198 (469)
Q Consensus 192 ~~~vvl~ 198 (469)
+..||.+
T Consensus 68 ~d~vi~~ 74 (227)
T 3dhn_A 68 ADAVISA 74 (227)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 6665544
No 395
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.34 E-value=1.1e+02 Score=28.24 Aligned_cols=57 Identities=19% Similarity=0.288 Sum_probs=36.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 26 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQ--GIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3468888888887755443 56665543 333334568888888888877653 455654
No 396
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=36.99 E-value=96 Score=28.41 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=34.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 16 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQ--GTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3468888888777654333 55555443 333344567888888888877653 344544
No 397
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=36.87 E-value=1.1e+02 Score=28.38 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=51.1
Q ss_pred EEEeCC---hHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAG---ATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G---~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|+++.| ..+++..+-.+---.-|.+++..|.|... +.++.+.+.+.++......
T Consensus 80 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~----------------------~~~s~~~l~~~f~~va~a~- 136 (309)
T 3fkr_A 80 VIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGAT----------------------FRVPEAQIFEFYARVSDAI- 136 (309)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTT----------------------BCCCHHHHHHHHHHHHHHC-
T ss_pred EEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccC----------------------CCCCHHHHHHHHHHHHHhc-
Confidence 565444 55666655444322338888888877210 0112233333333322222
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEeccc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITE-KNIHLISDEIY 233 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~-~~~~iI~Deay 233 (469)
...++++++|. ||..++.+.+.+|++ + .++.=|=||+-
T Consensus 137 ~lPiilYn~P~--tg~~l~~~~~~~La~---~~pnIvgiK~~~~ 175 (309)
T 3fkr_A 137 AIPIMVQDAPA--SGTALSAPFLARMAR---EIEQVAYFXIETP 175 (309)
T ss_dssp SSCEEEEECGG--GCCCCCHHHHHHHHH---HSTTEEEEEECSS
T ss_pred CCCEEEEeCCC--CCCCCCHHHHHHHHh---hCCCEEEEECCCc
Confidence 45677888884 899999888655553 4 36666665554
No 398
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=36.72 E-value=2.1e+02 Score=25.05 Aligned_cols=17 Identities=6% Similarity=0.145 Sum_probs=8.6
Q ss_pred hHHHHhhhCCCEEEEeec
Q 043923 148 FDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 148 ~~~~~~~~~g~~~~~v~~ 165 (469)
|...+... |+..+.++.
T Consensus 79 ~i~~~~~a-Gad~itvH~ 95 (228)
T 3ovp_A 79 WVKPMAVA-GANQYTFHL 95 (228)
T ss_dssp GHHHHHHH-TCSEEEEEG
T ss_pred HHHHHHHc-CCCEEEEcc
Confidence 33444444 666666554
No 399
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=36.44 E-value=23 Score=35.07 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 207 TMSRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 207 ~~s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
.=+.+++++|++.|+++|+-||+|-++-+
T Consensus 73 ~Gt~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 34789999999999999999999998864
No 400
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=36.39 E-value=1.8e+02 Score=25.36 Aligned_cols=7 Identities=14% Similarity=0.126 Sum_probs=3.8
Q ss_pred CeEEEEe
Q 043923 224 NIHLISD 230 (469)
Q Consensus 224 ~~~iI~D 230 (469)
++.|.+|
T Consensus 173 ~~~I~v~ 179 (230)
T 1tqj_A 173 DPWIEVD 179 (230)
T ss_dssp CCEEEEE
T ss_pred CCcEEEE
Confidence 4555555
No 401
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=36.31 E-value=3e+02 Score=26.52 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=55.5
Q ss_pred CCcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEEccCCCcC---------------hH
Q 043923 86 HGLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAE-PGEAFLLPTPYYPG---------------FD 149 (469)
Q Consensus 86 ~g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~Vl~~~P~y~~---------------~~ 149 (469)
.|..+-.+.--+|.+..-. +.-....++||.|++..=..+...|.. .|-.|++..-.-.. ..
T Consensus 24 ~gc~~~v~~qi~~~~~~~~--~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~ 101 (405)
T 3zu3_A 24 TGCEANVKKQIDYVTTEGP--IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFH 101 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCC--CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCC--cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHH
Confidence 4555544444456554322 111233455665555443445556667 78777654321111 12
Q ss_pred HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEec
Q 043923 150 RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTN 199 (469)
Q Consensus 150 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~ 199 (469)
..+... |.++..+..|- -|.+.+++.++.....-.++.+ +++|
T Consensus 102 ~~~~~~-G~~a~~i~~Dv-----td~~~v~~~v~~i~~~~G~IDi-LVNN 144 (405)
T 3zu3_A 102 KFAAQK-GLYAKSINGDA-----FSDEIKQLTIDAIKQDLGQVDQ-VIYS 144 (405)
T ss_dssp HHHHHT-TCCEEEEESCT-----TSHHHHHHHHHHHHHHTSCEEE-EEEC
T ss_pred HHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCE-EEEc
Confidence 233444 77787777763 2667888877766555557775 4454
No 402
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=36.29 E-value=1e+02 Score=28.35 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=32.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 27 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDN--GTTAIVVG-GTTGESPTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3468888888877654433 55655543 333334567888888888877653
No 403
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=36.06 E-value=1.4e+02 Score=26.12 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=52.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..- .-.... ..+... +.++..+.+|- -|.+.+++.+++..
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDV-----TVESDVINLVQSAI 80 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 345667666555445566667777877776543 211111 112223 55666666653 25677777766543
Q ss_pred hcCCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
....++..+|.+-...+.+ ...+.+++++..+
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3333566544432222222 1245666665554
No 404
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.79 E-value=1e+02 Score=28.22 Aligned_cols=51 Identities=6% Similarity=0.077 Sum_probs=32.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 16 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVAS--GTSAIVSV-GTTGESATLNHDEHADVVMMTLDL 66 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHH
Confidence 3468888888877654333 55655543 333334568888888888877653
No 405
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=35.46 E-value=90 Score=29.00 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=37.3
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK--NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~--~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||+
T Consensus 23 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEV--GCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 3468888888888765443 56665543 333334568888988888887765 455555
No 406
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=35.41 E-value=69 Score=28.78 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=48.5
Q ss_pred EEEeCChHHHHHHHHHHhcCC-CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 114 IVLTAGATSANETLMFCLAEP-GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~-gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
|+||.|+...=..++..|.+. |..|.+..-.-... ..+... +++++..++. |.+.+.++++ ++
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~-~v~~~~~D~~-------d~~~l~~~~~-------~~ 66 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRG-KVSVRQLDYF-------NQESMVEAFK-------GM 66 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBT-TBEEEECCTT-------CHHHHHHHTT-------TC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhC-CCEEEEcCCC-------CHHHHHHHHh-------CC
Confidence 666655333333344456554 65555443221111 111223 6777665443 6677887765 56
Q ss_pred eEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 193 KGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 193 ~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
..||.+....... .......+.+++.|++.++
T Consensus 67 d~vi~~a~~~~~~-~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 67 DTVVFIPSIIHPS-FKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp SEEEECCCCCCSH-HHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCCccc-hhhHHHHHHHHHHHHHcCC
Confidence 6666553321111 1123456788999988874
No 407
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=35.37 E-value=1.7e+02 Score=25.93 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=50.8
Q ss_pred CCcEEEeCC--hHHHHHHHHHHhcCCCCEEEEccCCCcC-hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAG--ATSANETLMFCLAEPGEAFLLPTPYYPG-FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G--~~~al~~~~~~l~~~gd~Vl~~~P~y~~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.| +...=..+...|.+.|..|++..-.-.. ........ +.++..+++|- -|.+.+++.+++...
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDV-----QNEEHLASLAGRVTE 80 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccC-----CCHHHHHHHHHHHHH
Confidence 344667665 3333345556677788777765433221 12222222 44444555542 256777777765544
Q ss_pred cCC---ceeEEEEecCC-CC-----CC--CCCCHHHHHHHHH
Q 043923 188 RHL---KVKGVLVTNPS-NP-----LG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~---~~~~vvl~~P~-NP-----tG--~~~s~e~l~~l~~ 218 (469)
... ++.. +++|.. .+ .+ .-.+.+++++..+
T Consensus 81 ~~g~~~~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (269)
T 2h7i_A 81 AIGAGNKLDG-VVHSIGFMPQTGMGINPFFDAPYADVSKGIH 121 (269)
T ss_dssp HHCTTCCEEE-EEECCCCCCGGGSTTSCGGGCCHHHHHHHHH
T ss_pred HhCCCCCceE-EEECCccCccccccccccccCCHHHHHHHHH
Confidence 333 5665 444442 21 11 2246667666555
No 408
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=35.26 E-value=2.2e+02 Score=25.15 Aligned_cols=107 Identities=7% Similarity=-0.022 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHhcCCCCEEEEccCCCcCh--HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEE
Q 043923 120 ATSANETLMFCLAEPGEAFLLPTPYYPGF--DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLV 197 (469)
Q Consensus 120 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl 197 (469)
+++++..+.++. ..|.+|++..|.-..- ..+.... |.++..+++... +++.+.+. +...|++
T Consensus 33 TT~lL~~~~r~~-~~g~kvli~kp~~D~Ryg~~i~sr~-G~~~~a~~i~~~-------~di~~~~~-------~~dvViI 96 (234)
T 2orv_A 33 STELMRRVRRFQ-IAQYKCLVIKYAKDTRYSSSFCTHD-RNTMEALPACLL-------RDVAQEAL-------GVAVIGI 96 (234)
T ss_dssp HHHHHHHHHHHH-TTTCCEEEEEETTCCCC------------CEEEEESSG-------GGGHHHHT-------TCSEEEE
T ss_pred HHHHHHHHHHHH-HCCCeEEEEeecCCccchHHHHhhc-CCeeEEEecCCH-------HHHHHHhc-------cCCEEEE
Confidence 367777776665 6777788877753211 3344444 776666655421 11222221 5677777
Q ss_pred ecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccccccccCCCCccchhhhhh
Q 043923 198 TNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGTVFSSPGFVSIMEILK 251 (469)
Q Consensus 198 ~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~~~~~~~~~s~~~~~~ 251 (469)
.--+.-++ +.++++++...|+.||+=.-..+ |.+..|.....+++
T Consensus 97 DEaQF~~~-------v~el~~~l~~~gi~VI~~GL~~D--F~~~~F~~~~~Ll~ 141 (234)
T 2orv_A 97 DEGQFFPD-------IVEFCEAMANAGKTVIVAALDGT--FQRKPFGAILNLVP 141 (234)
T ss_dssp SSGGGCTT-------HHHHHHHHHHTTCEEEEECCSBC--TTSSBCTTGGGGGG
T ss_pred Echhhhhh-------HHHHHHHHHhCCCEEEEEecccc--cccCCcccHHHHHH
Confidence 75555432 55677777788999999777766 66777777777765
No 409
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=34.82 E-value=1.5e+02 Score=26.23 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=46.7
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 114 IVLTAGATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
|++|.|+...=..++..|.+. |..|.+..-.-.... .+... +++++..++. |.+.+.++++ +
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~-~~~~~~~D~~-------d~~~~~~~~~-------~ 65 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-ALAAQ-GITVRQADYG-------DEAALTSALQ-------G 65 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-HHHHT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-hhhcC-CCeEEEcCCC-------CHHHHHHHHh-------C
Confidence 566655443334555666665 766655432222222 12223 6666654432 5677777765 4
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
+..||.+....+. -...-.+.+++.|++.++
T Consensus 66 ~d~vi~~a~~~~~---~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 66 VEKLLLISSSEVG---QRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp CSEEEECC-----------CHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCch---HHHHHHHHHHHHHHHcCC
Confidence 5666654332221 123345678888887764
No 410
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=34.58 E-value=1.6e+02 Score=25.52 Aligned_cols=93 Identities=11% Similarity=0.073 Sum_probs=45.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCce
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKV 192 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 192 (469)
.+++|.|+...=..+...|.+.|..|++..-.-.. ..... |+..+..++.. -+++.+.+.+. ....++
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-~~~~~~~D~~~-----~~~~~~~~~~~---~~~g~i 71 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-GAVPLPTDLEK-----DDPKGLVKRAL---EALGGL 71 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-TCEEEECCTTT-----SCHHHHHHHHH---HHHTSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-CcEEEecCCch-----HHHHHHHHHHH---HHcCCC
Confidence 36676666555556667777888877765433221 23334 65554444331 13333332222 112256
Q ss_pred eEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 193 KGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 193 ~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
..++ +|.. .+.+ .-.+.++++++.+
T Consensus 72 d~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 2ekp_A 72 HVLV-HAAAVNVRKPALELSYEEWRRVLY 99 (239)
T ss_dssp CEEE-ECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 6544 4432 2222 2356777777665
No 411
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=34.38 E-value=1.7e+02 Score=25.31 Aligned_cols=57 Identities=18% Similarity=0.430 Sum_probs=40.4
Q ss_pred HHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhccccccccccccccccccc
Q 043923 380 WKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLHNQSNHQSIKNSRRR 450 (469)
Q Consensus 380 ~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 450 (469)
.+..+.+.++.+.|-. .+..+||.+..+|+|.-++++..+++..++.+- +|.|.||-
T Consensus 102 IekAI~~S~LglnP~~-----dG~~Iri~iP~LTeErRkelvK~ak~~~E~aKv---------aIRniRrd 158 (209)
T 4gfq_A 102 IEKAILKADLGLNPSN-----DGTVIRIAFPALTEERRRDLVKVVKKYAEEAKV---------AVRNVRRD 158 (209)
T ss_dssp HHHHHHHHTSSCCCEE-----CSSCEEEECCBCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
T ss_pred HHHHHHHcCCCCCCCc-----CCCceeeeCCCccHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
Confidence 4444455577666643 245699999888999999999988888776665 56666653
No 412
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=34.25 E-value=1.4e+02 Score=25.85 Aligned_cols=71 Identities=11% Similarity=0.058 Sum_probs=36.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 112 SKIVLTAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
..|+||.|+...=..++..|...| ..|.+..-.-..... .... +++++..++ .|.+.++++++
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-~~~~-~~~~~~~Dl-------~d~~~~~~~~~------- 87 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-PYPT-NSQIIMGDV-------LNHAALKQAMQ------- 87 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-SCCT-TEEEEECCT-------TCHHHHHHHHT-------
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-cccC-CcEEEEecC-------CCHHHHHHHhc-------
Confidence 357777665555556667788888 566554322111100 1111 444443332 26778887775
Q ss_pred ceeEEEEe
Q 043923 191 KVKGVLVT 198 (469)
Q Consensus 191 ~~~~vvl~ 198 (469)
.+..||.+
T Consensus 88 ~~D~vv~~ 95 (236)
T 3qvo_A 88 GQDIVYAN 95 (236)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEc
Confidence 45665544
No 413
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=34.06 E-value=2.2e+02 Score=24.49 Aligned_cols=99 Identities=8% Similarity=0.165 Sum_probs=50.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC-------EEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 114 IVLTAGATSANETLMFCLAEPGE-------AFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd-------~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
+++|.|+...=..+...|.+.|. .|++..-.-...... +... +.++..+.+|- -|.+.++..++
T Consensus 5 vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecC-----CCHHHHHHHHH
Confidence 56665555444455566666676 666654322111111 1122 55666666653 25677777776
Q ss_pred HHHhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
.......++..+|.+--..+.+. ..+.+++++..+
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 65444446776554322222221 246666666554
No 414
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.03 E-value=2.2e+02 Score=24.35 Aligned_cols=100 Identities=8% Similarity=0.003 Sum_probs=50.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC--CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 113 KIVLTAGATSANETLMFCLAEPG--EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.++||.|+...=..+...|.+.| ..|++..-.-.......... +.++..+.+|- -|.+.+++.++.......
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTV-----TCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCT-----TCHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhcc-CCceEEEEeec-----CCHHHHHHHHHHHHHhcC
Confidence 46676665554456667777888 77776544322222221111 34455555542 155677776665433222
Q ss_pred --ceeEEEEecCCCC-CC--CCCCHHHHHHHHH
Q 043923 191 --KVKGVLVTNPSNP-LG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 --~~~~vvl~~P~NP-tG--~~~s~e~l~~l~~ 218 (469)
++..+|.+-...+ .+ ...+.+++++..+
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 4665544322222 22 2245666665554
No 415
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=34.00 E-value=1.1e+02 Score=26.69 Aligned_cols=80 Identities=6% Similarity=0.019 Sum_probs=43.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.+++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~---- 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNL-----ANKEECSNLISKT---- 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHTC----
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCC-----CCHHHHHHHHHhc----
Confidence 3445677666655555566777788888887665433333333333 33444444442 1556777666532
Q ss_pred CceeEEEEecC
Q 043923 190 LKVKGVLVTNP 200 (469)
Q Consensus 190 ~~~~~vvl~~P 200 (469)
.++..+| +|.
T Consensus 83 ~~id~li-~~A 92 (249)
T 3f9i_A 83 SNLDILV-CNA 92 (249)
T ss_dssp SCCSEEE-ECC
T ss_pred CCCCEEE-ECC
Confidence 2456544 443
No 416
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=33.87 E-value=1.7e+02 Score=25.77 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=41.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
...++||.|+...=..+...|.+.|..|++..-.-.. .. .+..+..++. |.+.+++.++.......
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~-~~~~~~~Dl~-------d~~~v~~~~~~~~~~~g 86 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP------PE-GFLAVKCDIT-------DTEQVEQAYKEIEETHG 86 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CT-TSEEEECCTT-------SHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh------hc-cceEEEecCC-------CHHHHHHHHHHHHHHcC
Confidence 3456776666555556667777888887765432111 11 2333333322 56777777776544444
Q ss_pred ceeEEEEe
Q 043923 191 KVKGVLVT 198 (469)
Q Consensus 191 ~~~~vvl~ 198 (469)
++..+|.+
T Consensus 87 ~iD~lv~n 94 (253)
T 2nm0_A 87 PVEVLIAN 94 (253)
T ss_dssp SCSEEEEE
T ss_pred CCCEEEEC
Confidence 66765543
No 417
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=33.70 E-value=51 Score=33.09 Aligned_cols=27 Identities=7% Similarity=0.322 Sum_probs=23.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 203 PLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 203 PtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
|.|..++.+|+++|++.|+++|+-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 446679999999999999999998885
No 418
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.69 E-value=2.3e+02 Score=24.45 Aligned_cols=102 Identities=8% Similarity=0.043 Sum_probs=53.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCC-CcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPY-YPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~-y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..-. -...... +... +.++..+.+|- -|.+.+++.+++..
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADL-----ATSEACQQLVDEFV 80 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 3456776665554455666677788777765433 2222222 2222 55666666653 25677777776544
Q ss_pred hcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~ 218 (469)
....++..||.+-.. .+.+. -.+.++++++.+
T Consensus 81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 333356655443222 22222 245566555554
No 419
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=33.59 E-value=1.6e+02 Score=26.15 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=48.9
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 114 IVLTAGATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
|++|.|+...=..++..|.+. |..|.+..-.-.... .+... +++++..++. |.+.+.++++ +
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~-~~~~~~~D~~-------d~~~l~~~~~-------~ 66 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQ-GVEVRHGDYN-------QPESLQKAFA-------G 66 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhc-CCeEEEeccC-------CHHHHHHHHh-------c
Confidence 666655443334555667665 765655433222222 12223 6666654432 5677777765 4
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCe
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNI 225 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~ 225 (469)
+..|+.+-..++ +......-...+++.|++.++
T Consensus 67 ~d~vi~~a~~~~-~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 67 VSKLLFISGPHY-DNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CSEEEECCCCCS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCc-CchHHHHHHHHHHHHHHHcCC
Confidence 566665433222 110123345678888887764
No 420
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=33.41 E-value=2.5e+02 Score=24.67 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=40.1
Q ss_pred CcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..++||.|+ ...=..+...|.+.|..|++..-.-.. ....+....+. ...+++|- -|.+.+++.+++...
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS-DIVLQCDV-----AEDASIDTMFAELGK 83 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCC-cEEEEccC-----CCHHHHHHHHHHHHH
Confidence 346666654 333344556666778777765432211 11111111122 13344432 256778877776554
Q ss_pred cCCceeEEEEecC
Q 043923 188 RHLKVKGVLVTNP 200 (469)
Q Consensus 188 ~~~~~~~vvl~~P 200 (469)
...++..+ ++|.
T Consensus 84 ~~g~iD~l-v~~A 95 (265)
T 1qsg_A 84 VWPKFDGF-VHSI 95 (265)
T ss_dssp TCSSEEEE-EECC
T ss_pred HcCCCCEE-EECC
Confidence 44466654 4444
No 421
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=33.40 E-value=2.3e+02 Score=24.30 Aligned_cols=99 Identities=11% Similarity=0.164 Sum_probs=51.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+++|.|+...=..+...|.+.|..|++. ...-.... ..+... +.++..+.+|- -|.+.+++.+++.....
T Consensus 4 vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 5666555444455666677788777763 32211111 112223 55676666653 25677887777654444
Q ss_pred CceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+|.+--..+.+ ...+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 4667554332222222 1245666665554
No 422
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.27 E-value=2.5e+02 Score=24.59 Aligned_cols=97 Identities=13% Similarity=-0.023 Sum_probs=49.0
Q ss_pred CcHHHHHHHHHHHHhHcCCCCCCCCCcEEEeCC-hHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeec
Q 043923 87 GLPAFKKALVEFMSEIRGNKVTFDTSKIVLTAG-ATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQC 165 (469)
Q Consensus 87 g~~~Lr~aia~~l~~~~~~~~~~~~~~i~~t~G-~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (469)
++..|++.+.+... .++ . ...|.+..| -.+++..+-..+-..|..|++..-. ....++...++.|+.++.
T Consensus 20 ~~~~L~~~~~~i~~-e~~----~-~~~I~vi~~~le~av~~a~~~~~~~~~dVIISRGg---ta~~Lr~~~~iPVV~I~v 90 (225)
T 2pju_A 20 SVTRLFELFRDISL-EFD----H-LANITPIQLGFEKAVTYIRKKLANERCDAIIAAGS---NGAYLKSRLSVPVILIKP 90 (225)
T ss_dssp CCHHHHHHHHHHHT-TTT----T-TCEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHH---HHHHHHTTCSSCEEEECC
T ss_pred chHHHHHHHHHHHH-hhC----C-CceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCCh---HHHHHHhhCCCCEEEecC
Confidence 34677664444333 211 1 133555444 5567776655443334446665532 233344444888998886
Q ss_pred cCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCC
Q 043923 166 TSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSN 202 (469)
Q Consensus 166 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~N 202 (469)
. .-++-.+|......+ .+..++..++-
T Consensus 91 s--------~~Dil~aL~~a~~~~--~kIavVg~~~~ 117 (225)
T 2pju_A 91 S--------GYDVLQFLAKAGKLT--SSIGVVTYQET 117 (225)
T ss_dssp C--------HHHHHHHHHHTTCTT--SCEEEEEESSC
T ss_pred C--------HHHHHHHHHHHHhhC--CcEEEEeCchh
Confidence 4 234455555443332 34456665553
No 423
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=33.16 E-value=1.8e+02 Score=25.25 Aligned_cols=101 Identities=12% Similarity=0.135 Sum_probs=52.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++. ...-..... .+... +.++..+..|-. |.+.++..++...
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~ 80 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLE-----SLHGVEALYSSLD 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TCEEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CCceEEEecCcC-----CHHHHHHHHHHHH
Confidence 3456666666555556667777888877764 322222222 22233 667777776532 4566665554432
Q ss_pred hc------CCceeEEEEecC-CCCCCC--CCCHHHHHHHHH
Q 043923 187 KR------HLKVKGVLVTNP-SNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~------~~~~~~vvl~~P-~NPtG~--~~s~e~l~~l~~ 218 (469)
.. ..++..+ ++|. ..+.+. ..+.+++++..+
T Consensus 81 ~~~~~~~~~~~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 81 NELQNRTGSTKFDIL-INNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHHHHHSSSCEEEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhcccccCCcccEE-EECCCCCCCCChhhCCHHHHHHHHh
Confidence 11 1136654 4444 333332 246677666655
No 424
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=33.00 E-value=2.6e+02 Score=25.51 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=49.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
..|+||.|+...=..++..|.+.|..|++..-.-......+....+++++..++. |.+.++++++.. +
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~-------d~~~~~~~~~~~-----~ 89 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIA-------DHALVNQLIGDL-----Q 89 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTT-------CHHHHHHHHHHH-----C
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCC-------CHHHHHHHHhcc-----C
Confidence 3577776544444455566667777776654321111111111014444443322 567777777642 4
Q ss_pred eeEEEEecCCCCCCCCCC-------HHHHHHHHHHHHhcCe
Q 043923 192 VKGVLVTNPSNPLGTTMS-------RNELNLLVNIITEKNI 225 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s-------~e~l~~l~~~~~~~~~ 225 (469)
+..||-+-.....+ ... ..-...+++.|.+.++
T Consensus 90 ~D~vih~A~~~~~~-~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 90 PDAVVHTAASYKDP-DDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CSEEEECCCCCSCT-TCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcEEEECceecCCC-ccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 67666543322221 110 1123567777877653
No 425
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=32.83 E-value=2e+02 Score=24.83 Aligned_cols=81 Identities=14% Similarity=0.244 Sum_probs=44.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...+++|.|+...=..+...|.+.|..|++. ...-..... .+... +.++..+.+|- -|.+.+++.+++..
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 78 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDV-----KNPEDVENMVKTAM 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TCCEEEEESCT-----TSHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 3456776665555555666777788777765 322221211 12223 55666666553 25677777776544
Q ss_pred hcCCceeEEEE
Q 043923 187 KRHLKVKGVLV 197 (469)
Q Consensus 187 ~~~~~~~~vvl 197 (469)
....++..+|.
T Consensus 79 ~~~~~~d~vi~ 89 (247)
T 2hq1_A 79 DAFGRIDILVN 89 (247)
T ss_dssp HHHSCCCEEEE
T ss_pred HhcCCCCEEEE
Confidence 33345665443
No 426
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=32.81 E-value=1.5e+02 Score=28.23 Aligned_cols=57 Identities=19% Similarity=0.250 Sum_probs=34.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 74 dg~ID~~al~~lv~~li~~--Gv~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQN--GAEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3467888888777654433 55665543 333334567888888888766653 355554
No 427
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=32.62 E-value=1.8e+02 Score=25.46 Aligned_cols=100 Identities=12% Similarity=0.069 Sum_probs=52.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH----HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD----LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..++||.|+...=..+...|.+.|..|++..-.-...... .... +.++..+.+|- -|.+.+++.+++..+
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADV-----TKKEDLHKIVEEAMS 81 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3466666655544566677778888777653222111111 1222 44566666553 256777777776544
Q ss_pred cCCceeEEEEecCC--C-CCC--CCCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS--N-PLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~--N-PtG--~~~s~e~l~~l~~ 218 (469)
...++..+| +|.. . +.+ .-.+.+++++..+
T Consensus 82 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 82 HFGKIDFLI-NNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HHSCCCEEE-CCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEE-ECCcccccCCCccccCCHHHHHHHHH
Confidence 444667544 4332 1 111 2346667666655
No 428
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.32 E-value=2.3e+02 Score=24.02 Aligned_cols=75 Identities=15% Similarity=0.046 Sum_probs=42.0
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeE
Q 043923 115 VLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKG 194 (469)
Q Consensus 115 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 194 (469)
+...+-.+++..+-. + +.|..|++..-. ....++...++.++.++.+ .-++-.+|......+ .+.
T Consensus 33 i~~~~l~~~v~~a~~-~-~~~~dVIISRGg---ta~~lr~~~~iPVV~I~~s--------~~Dil~al~~a~~~~--~kI 97 (196)
T 2q5c_A 33 TKTASLTRASKIAFG-L-QDEVDAIISRGA---TSDYIKKSVSIPSISIKVT--------RFDTMRAVYNAKRFG--NEL 97 (196)
T ss_dssp EEECCHHHHHHHHHH-H-TTTCSEEEEEHH---HHHHHHTTCSSCEEEECCC--------HHHHHHHHHHHGGGC--SEE
T ss_pred EEECCHHHHHHHHHH-h-cCCCeEEEECCh---HHHHHHHhCCCCEEEEcCC--------HhHHHHHHHHHHhhC--CcE
Confidence 344556667776654 4 666556666533 2333444448899999864 234555565544433 355
Q ss_pred EEEecCCCCC
Q 043923 195 VLVTNPSNPL 204 (469)
Q Consensus 195 vvl~~P~NPt 204 (469)
.++..++-+.
T Consensus 98 avvg~~~~~~ 107 (196)
T 2q5c_A 98 ALIAYKHSIV 107 (196)
T ss_dssp EEEEESSCSS
T ss_pred EEEeCcchhh
Confidence 5666555433
No 429
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=32.25 E-value=94 Score=28.93 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=35.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||+
T Consensus 37 dg~iD~~~l~~li~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQ--GINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4468888888877755433 55655533 333344567888888888877653 344444
No 430
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=32.16 E-value=25 Score=37.11 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 210 RNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 210 ~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
.++++++++.|++.|+-||.|-+|-+
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH 279 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNH 279 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 79999999999999999999999864
No 431
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=32.13 E-value=94 Score=28.35 Aligned_cols=21 Identities=0% Similarity=0.221 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhcCeEEEEe
Q 043923 210 RNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 210 ~e~l~~l~~~~~~~~~~iI~D 230 (469)
.+.++++++.|.++|+.+|+|
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 466777777777777777777
No 432
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.99 E-value=93 Score=28.93 Aligned_cols=49 Identities=4% Similarity=0.089 Sum_probs=27.0
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 39 g~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~ 87 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQE--GTNAIVAV-GTTGESATLDVEEHIQVIRRVVD 87 (314)
T ss_dssp SCBCHHHHHHHHHHHHHH--TCCEEEES-SGGGTGGGCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 357777777666543332 45554433 22223345677777777776654
No 433
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=31.96 E-value=2.6e+02 Score=24.43 Aligned_cols=102 Identities=9% Similarity=0.091 Sum_probs=51.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... +.++..+..|- -|.+.+++.++....
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDA-----SLRPEREKLMQTVSS 87 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34566666655544566667777887777654332211111 2222 55565666552 256777777665433
Q ss_pred cC-CceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 188 RH-LKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 188 ~~-~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
.- .++..+|.+-...+.+ ...+.+++++..+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22 3667655443222222 2246667666555
No 434
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.89 E-value=68 Score=31.36 Aligned_cols=27 Identities=15% Similarity=0.317 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 209 SRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 209 s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
+.+++++|++.|+++|+-||+|-++-.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH 108 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNH 108 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 679999999999999999999988743
No 435
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=31.88 E-value=1.1e+02 Score=28.00 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=29.0
Q ss_pred cccCHHHHHHHHHHHHh-cCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 171 FQITETAIEEAYQLAQK-RHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~-~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
..+|.+.+++.++.... . .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 19 g~iD~~~l~~lv~~li~~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~ 68 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKM--KVDGLYVG-GSTGENFMLSTEEKKEIFRIAKD 68 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhC--CCcEEEeC-ccccchhhCCHHHHHHHHHHHHH
Confidence 45777777777765443 3 45554443 22222345777777777777665
No 436
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=31.87 E-value=1.5e+02 Score=26.29 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=44.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... +.++..+.+|- -|.+.+++.++...
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNI-----SDPKSVEETISQQE 106 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeec-----CCHHHHHHHHHHHH
Confidence 34456776655544445556676778777765433222222 12223 55566666552 25677777776543
Q ss_pred hcCCceeEEEEe
Q 043923 187 KRHLKVKGVLVT 198 (469)
Q Consensus 187 ~~~~~~~~vvl~ 198 (469)
....++..+|.+
T Consensus 107 ~~~g~id~li~~ 118 (279)
T 3ctm_A 107 KDFGTIDVFVAN 118 (279)
T ss_dssp HHHSCCSEEEEC
T ss_pred HHhCCCCEEEEC
Confidence 333356765543
No 437
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=31.68 E-value=56 Score=30.00 Aligned_cols=75 Identities=13% Similarity=0.197 Sum_probs=43.0
Q ss_pred CCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 143 PYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 143 P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
|.|..+....... .++++-+-.++. .-.+.++++++. .++.+++..+ | ++.++.+++.+.|++
T Consensus 51 ~vy~sl~el~~~~-~~D~viI~tP~~----~~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 51 PVFNTVREAVAAT-GATASVIYVPAP----FCKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLDE 113 (288)
T ss_dssp EEESSHHHHHHHH-CCCEEEECCCGG----GHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHHH
T ss_pred eccCCHHHHhhcC-CCCEEEEecCHH----HHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHH
Confidence 4465555555422 344433322211 234556666554 5665554322 3 366778899999999
Q ss_pred cCeEEEEecccc
Q 043923 223 KNIHLISDEIYS 234 (469)
Q Consensus 223 ~~~~iI~Deay~ 234 (469)
+++.++-..+..
T Consensus 114 ~gv~liGPNc~G 125 (288)
T 2nu8_A 114 AGVRMIGPNTPG 125 (288)
T ss_dssp HTCEEECSSCCE
T ss_pred cCCEEEecCCcc
Confidence 999887666543
No 438
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=31.63 E-value=1.2e+02 Score=28.50 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=23.2
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 51 ~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve 98 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAA--EVDSVGIL-GSTGIYMYLTREERRRAIEAAAT 98 (332)
T ss_dssp CBCHHHHHHHHHHHHHH--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 46666666655543222 34443332 22222344566666666665554
No 439
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=31.55 E-value=95 Score=28.63 Aligned_cols=56 Identities=11% Similarity=0.196 Sum_probs=36.1
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc----CeEEEE
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK----NIHLIS 229 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~----~~~iI~ 229 (469)
..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 23 g~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIEN--GIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TEECHHHHHHHHHHHHHT--TCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 368888888877755433 56665543 333344567888888888877664 456665
No 440
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=31.39 E-value=2.8e+02 Score=24.64 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=55.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
++...++||.|+...=..+...|.+.|..|++..-. ...... +... +.++..+.+|-. |.+.+++..+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv~-----d~~~v~~~~~~~ 101 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLA-----DLEGAANVAEEL 101 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 344567777776665556667788889888776522 212222 2223 667777776632 456665553322
Q ss_pred HhcCCceeEEEEecCC-CCCCC--CCCHHHHHHHHHH
Q 043923 186 QKRHLKVKGVLVTNPS-NPLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~-NPtG~--~~s~e~l~~l~~~ 219 (469)
.. ..++.. +++|.. .+.+. ..+.+++++..+.
T Consensus 102 ~~-~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 102 AA-TRRVDV-LVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HH-HSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred Hh-cCCCcE-EEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 21 235665 444442 22222 3477777776653
No 441
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=31.39 E-value=93 Score=28.88 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=25.1
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 23 g~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~ 71 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAH--HTDGILLA-GTTAESPTLTHDEELELFAAVQK 71 (311)
T ss_dssp SSBCTTHHHHHHHHHHHT--TCCCEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 346666666666543322 34443332 22223345666666666666554
No 442
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.11 E-value=1.9e+02 Score=25.88 Aligned_cols=102 Identities=9% Similarity=0.096 Sum_probs=52.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChH---HHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFD---RDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+...=..+...|.+.|..|++..- .-.... ..+... |.++..+.+|-. |.+.+++.++...
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 102 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLA-----DLSSHQATVDAVV 102 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCTT-----SGGGHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 344667666665555666777788888777542 211111 112223 666777776532 4556666665544
Q ss_pred hcCCceeEEEEecCC--CCCCC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS--NPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~--NPtG~--~~s~e~l~~l~~ 218 (469)
....++..+|.+--. .+.+. -++.+++++..+
T Consensus 103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 4da9_A 103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138 (280)
T ss_dssp HHHSCCCEEEEECC------CCGGGCCHHHHHHHTT
T ss_pred HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHH
Confidence 333467755543222 11121 246666665544
No 443
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=31.04 E-value=1e+02 Score=27.91 Aligned_cols=103 Identities=9% Similarity=0.114 Sum_probs=54.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCC---EEEEccCCCcChHHHHhh---h-CCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGE---AFLLPTPYYPGFDRDLKW---R-TGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd---~Vl~~~P~y~~~~~~~~~---~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
...++||.|+...=..+...|.+.|. .|++..-.-......... . .+.++..+.+|-. |.+++++.++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 107 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIE 107 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHH
Confidence 34566766655544555566666664 666654433222222211 1 1567777776632 5577777776
Q ss_pred HHHhcCCceeEEEEecCC-C-CCCC--CCCHHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPS-N-PLGT--TMSRNELNLLVNI 219 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~-N-PtG~--~~s~e~l~~l~~~ 219 (469)
+......++.. +++|.. . +.+. .++.++++++.+.
T Consensus 108 ~~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 108 NLPQEFKDIDI-LVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp TSCGGGCSCCE-EEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 54333345665 444442 2 1222 3477887777664
No 444
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=30.90 E-value=38 Score=33.41 Aligned_cols=29 Identities=31% Similarity=0.562 Sum_probs=25.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 201 SNPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 201 ~NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
++|.|..++.+++++|++.|+++|+-||-
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 35678899999999999999999998885
No 445
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=30.78 E-value=1.5e+02 Score=27.15 Aligned_cols=88 Identities=15% Similarity=0.264 Sum_probs=49.9
Q ss_pred EEEeCCh---HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGA---TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~---~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|+++.|+ .+++..+-.+---.-|.|++..|.|... +.+.+.+.++......
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~ia~a~- 125 (292)
T 2vc6_A 72 VIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP-------------------------TQEGIYQHFKAIDAAS- 125 (292)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-------------------------CHHHHHHHHHHHHHHC-
T ss_pred EEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-------------------------CHHHHHHHHHHHHHhC-
Confidence 5665554 6666655444322348899989988432 1122333222222111
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc-CeEEEEec
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK-NIHLISDE 231 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~-~~~iI~De 231 (469)
...++++++|. .||..++.+.+.+|+ +++ ++.=|=|.
T Consensus 126 ~lPiilYn~P~-~tg~~l~~~~~~~La---~~~pnIvgiK~s 163 (292)
T 2vc6_A 126 TIPIIVYNIPG-RSAIEIHVETLARIF---EDCPNVKGVXDA 163 (292)
T ss_dssp SSCEEEEECHH-HHSCCCCHHHHHHHH---HHCTTEEEEEEC
T ss_pred CCCEEEEeCcc-ccCcCCCHHHHHHHH---hhCCCEEEEecC
Confidence 45677877776 489999999866665 323 55555553
No 446
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=30.67 E-value=2.6e+02 Score=23.98 Aligned_cols=99 Identities=12% Similarity=0.127 Sum_probs=48.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCcChHHH---HhhhCCCEEEE-eeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLP-TPYYPGFDRD---LKWRTGVEIVP-IQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~~~~~~---~~~~~g~~~~~-v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
+++|.|+...=..+...|.+.|..|++. ...-...... +... +.++.. +..|- -|.+.+++.+++....
T Consensus 4 vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 5666665554455666777888877765 3321111111 2222 444444 44442 2567777776654333
Q ss_pred CCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
..++..+|.+-...+.+ ...+.+++++..+
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 33566554432222222 2345666655544
No 447
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.62 E-value=1.3e+02 Score=27.64 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=31.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRK--GIDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3467888888777654433 45555543 333334567888888888877764
No 448
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=30.46 E-value=33 Score=33.79 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 209 SRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 209 s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
+.+++++|++.|+++|+-||+|-++-+
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 589999999999999999999998854
No 449
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.30 E-value=1.3e+02 Score=27.56 Aligned_cols=51 Identities=8% Similarity=0.034 Sum_probs=35.2
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSN--GCDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 3468989888888765443 56665543 333344678999999999988764
No 450
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=30.14 E-value=1.4e+02 Score=25.27 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=36.1
Q ss_pred EEEeCChHHHHHHHHHHhc-CCCCEEEEccCCCc-ChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 114 IVLTAGATSANETLMFCLA-EPGEAFLLPTPYYP-GFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
|+||.|+...=..+...|. +.|..|.+..-.-. ...... .. +..+..+..|- -|.+.++++++ +
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~-----~d~~~~~~~~~-------~ 73 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-ID-HERVTVIEGSF-----QNPGXLEQAVT-------N 73 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HT-STTEEEEECCT-----TCHHHHHHHHT-------T
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cC-CCceEEEECCC-----CCHHHHHHHHc-------C
Confidence 6776654444445556676 68877776543211 111111 02 33344444432 26677887775 5
Q ss_pred eeEEEEe
Q 043923 192 VKGVLVT 198 (469)
Q Consensus 192 ~~~vvl~ 198 (469)
+..||.+
T Consensus 74 ~d~vv~~ 80 (221)
T 3r6d_A 74 AEVVFVG 80 (221)
T ss_dssp CSEEEES
T ss_pred CCEEEEc
Confidence 5655544
No 451
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=30.02 E-value=2.6e+02 Score=23.91 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=50.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
++...+++|.|+...=..+...|.+.|..|++....-...........+.+++..++. |.+.+++.++.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-------~~~~~~~~~~~---- 73 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLG-------DWDATEKALGG---- 73 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTT-------CHHHHHHHHTT----
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCC-------CHHHHHHHHHH----
Confidence 3445677777665555566677777888777765432222222222225666533322 56777776652
Q ss_pred CCceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 189 HLKVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 189 ~~~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
..++..+|.+-...+.+ ...+.+++++..+
T Consensus 74 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 1cyd_A 74 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFS 105 (244)
T ss_dssp CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCcccCCCCcccCCHHHHHHHHh
Confidence 12456544332222222 1245566655544
No 452
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=29.94 E-value=1.8e+02 Score=29.17 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=55.8
Q ss_pred CCCCcEEEeCChHHHHH-HHHHHhcCCCCE-EEEc-cCC----------------CcChHHHHhhhCCCEEEEeeccCCC
Q 043923 109 FDTSKIVLTAGATSANE-TLMFCLAEPGEA-FLLP-TPY----------------YPGFDRDLKWRTGVEIVPIQCTSLN 169 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~-~~~~~l~~~gd~-Vl~~-~P~----------------y~~~~~~~~~~~g~~~~~v~~~~~~ 169 (469)
+.++.+++..|++.+|- .+...|.+.|.. |++. .-. -......+... |.++..+.+|-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDL-- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCC--
Confidence 34556666556555554 344556666654 4443 221 11122334445 88888888764
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCC--CCCHHHHHHHHH
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGT--TMSRNELNLLVN 218 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~--~~s~e~l~~l~~ 218 (469)
-|.+++++.++... ...++..||-+--....+. -++.++++++.+
T Consensus 325 ---td~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 325 ---TDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ---TSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 26788888887644 3345665544322222232 357777776665
No 453
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.79 E-value=1.6e+02 Score=26.85 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=45.2
Q ss_pred EEEeCCh---HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGA---TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~---~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|+++.|+ .+++..+-.+---.-|.|++..|.|... +.+.+.+..+......
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~va~a~- 125 (294)
T 2ehh_A 72 VIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP-------------------------TQRGLYEHFKTVAQEV- 125 (294)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-------------------------CHHHHHHHHHHHHHHC-
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-------------------------CHHHHHHHHHHHHHhc-
Confidence 6665554 6666655444322348888888888432 1123333332222111
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHH
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLV 217 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~ 217 (469)
...++++++|.. ||..++.+.+.+|+
T Consensus 126 ~lPiilYn~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 126 DIPIIIYNIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp CSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred CCCEEEEeCCcc-cCcCCCHHHHHHHH
Confidence 456778887864 89999999977665
No 454
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.71 E-value=1.1e+02 Score=27.91 Aligned_cols=91 Identities=14% Similarity=0.063 Sum_probs=47.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
.|+||.++...=..++..|.+.|..|.+..-.-..-.. .+... |++++..++. |.+.+.++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~-~v~~v~~Dl~-------d~~~l~~a~~------ 78 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL-GAIIVKGELD-------EHEKLVELMK------ 78 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT-TCEEEECCTT-------CHHHHHHHHT------
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC-CCEEEEecCC-------CHHHHHHHHc------
Confidence 57777653322334445565666555443221111111 12234 7777765543 5678888775
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
.+..||.+-+. .. ....+.+++.|++.+
T Consensus 79 -~~d~vi~~a~~--~~----~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 79 -KVDVVISALAF--PQ----ILDQFKILEAIKVAG 106 (318)
T ss_dssp -TCSEEEECCCG--GG----STTHHHHHHHHHHHC
T ss_pred -CCCEEEECCch--hh----hHHHHHHHHHHHhcC
Confidence 56666554321 11 123466888888876
No 455
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.63 E-value=2.8e+02 Score=25.25 Aligned_cols=77 Identities=18% Similarity=0.318 Sum_probs=45.4
Q ss_pred EEEeCCh---HHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 114 IVLTAGA---TSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 114 i~~t~G~---~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
|+++.|+ .+++..+- ...+-| |.|++..|.|... +.+.+.+..+......
T Consensus 73 viaGvg~~~t~~ai~la~-~a~~~Gadavlv~~P~y~~~-------------------------s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 73 VIAGTGANATAEAISLTQ-RFNDSGIVGCLTVTPYYNRP-------------------------SQEGLYQHFKAIAEHT 126 (292)
T ss_dssp EEEECCCSSHHHHHHHHH-HTTTSSCSEEEEECCCSSCC-------------------------CHHHHHHHHHHHHTTC
T ss_pred EEEecCCccHHHHHHHHH-HHHhcCCCEEEECCCCCCCC-------------------------CHHHHHHHHHHHHHhc
Confidence 6665554 56665553 333444 8888888887422 1233333333332221
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~ 218 (469)
...++++++|. .||..++.+.+.+|++
T Consensus 127 -~lPiilYn~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 127 -DLPQILYNVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp -SSCEEEECCHH-HHSCCCCHHHHHHHHT
T ss_pred -CCCEEEEeCcc-hhccCCCHHHHHHHHc
Confidence 45567777776 5899999999766653
No 456
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=29.60 E-value=85 Score=28.27 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=50.9
Q ss_pred EEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHH
Q 043923 137 AFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLL 216 (469)
Q Consensus 137 ~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l 216 (469)
.|+.+...|.+....+...... +.+|+-. .+|-+|+-++.++-.- ...+|++. -.+++.++++++
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~--v~lPvLr-KDFiid~yQI~eAr~~------GADaILLI------~a~L~~~~l~~l 145 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS--VSIPILM-SDFIVKESQIDDAYNL------GADTVLLI------VKILTERELESL 145 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT--CSSCEEE-ESCCCSHHHHHHHHHH------TCSEEEEE------GGGSCHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHh--cCCCEee-ccccccHHHHHHHHHc------CCCeeehH------HhhcCHHHHHHH
Confidence 4666666676655444322011 1233321 4788998887766433 55556553 245788999999
Q ss_pred HHHHHhcCeEEEEeccc
Q 043923 217 VNIITEKNIHLISDEIY 233 (469)
Q Consensus 217 ~~~~~~~~~~iI~Deay 233 (469)
.+.|++.|+-+++ |++
T Consensus 146 ~~~A~~lGl~~Lv-EVh 161 (258)
T 4a29_A 146 LEYARSYGMEPLI-LIN 161 (258)
T ss_dssp HHHHHHTTCCCEE-EES
T ss_pred HHHHHHHhHHHHH-hcc
Confidence 9999999988777 444
No 457
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=29.54 E-value=3.2e+02 Score=25.34 Aligned_cols=96 Identities=10% Similarity=0.113 Sum_probs=47.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcCh-HHHHhhhCCCEEEEee-ccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGF-DRDLKWRTGVEIVPIQ-CTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~-~~~~~~~~g~~~~~v~-~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
..|+||.++...=..++..|.+.|..|.+..-.-... ...+....+++++..+ +. |.+.+.++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~-------d~~~l~~~~~------ 72 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN-------NVPLMDTLFE------ 72 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTT-------CHHHHHHHHT------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccC-------CHHHHHHHHh------
Confidence 4577776544444455566666676665543221111 1112111145554433 22 5677777765
Q ss_pred CceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 190 LKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 190 ~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
.+..||.+.... +.. ....-+.+++.|++.+
T Consensus 73 -~~d~Vi~~a~~~-~~~--~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 73 -GAHLAFINTTSQ-AGD--EIAIGKDLADAAKRAG 103 (352)
T ss_dssp -TCSEEEECCCST-TSC--HHHHHHHHHHHHHHHS
T ss_pred -cCCEEEEcCCCC-CcH--HHHHHHHHHHHHHHcC
Confidence 456666443221 111 1223377888888877
No 458
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.27 E-value=1.2e+02 Score=27.73 Aligned_cols=50 Identities=14% Similarity=0.247 Sum_probs=30.2
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 15 g~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEK--GIDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp SCBCHHHHHHHHHHHHHT--TCCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 457777777777654333 45554433 333334567777777777777654
No 459
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=29.11 E-value=1.8e+02 Score=27.16 Aligned_cols=37 Identities=19% Similarity=0.059 Sum_probs=31.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 200 PSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 200 P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
-+||.|-..+.+...++++.|+++|+.+++|--|++.
T Consensus 49 ~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~ 85 (334)
T 1fob_A 49 WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDT 85 (334)
T ss_dssp CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 3678888899999999999999999999999766554
No 460
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.01 E-value=1.1e+02 Score=25.95 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=27.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeecc
Q 043923 114 IVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCT 166 (469)
Q Consensus 114 i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (469)
|+||.|+...=..++..|.+.|..|.+..-.-.... .+. . +++++..++.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~-~-~~~~~~~D~~ 52 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT-QTH-K-DINILQKDIF 52 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH-HHC-S-SSEEEECCGG
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh-hcc-C-CCeEEecccc
Confidence 666665444344555666677877776554322111 111 3 7777766654
No 461
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.98 E-value=1.1e+02 Score=27.50 Aligned_cols=92 Identities=18% Similarity=0.136 Sum_probs=47.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEc-cCCCc----ChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLP-TPYYP----GFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~P~y~----~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
..|+||.|+...=..++..|.+.|..|.+. ...-. .-.. .+... |++++..++. |.+.+.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~-~v~~v~~D~~-------d~~~l~~~~~ 76 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS-GANIVHGSID-------DHASLVEAVK 76 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT-TCEEECCCTT-------CHHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC-CCEEEEeccC-------CHHHHHHHHc
Confidence 347777653333334445666666555543 22111 1111 11223 7777655432 5678888776
Q ss_pred HHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 184 LAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
++..||.+-+.. . ......+++.|++.+
T Consensus 77 -------~~d~vi~~a~~~--~----~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 77 -------NVDVVISTVGSL--Q----IESQVNIIKAIKEVG 104 (308)
T ss_dssp -------TCSEEEECCCGG--G----SGGGHHHHHHHHHHC
T ss_pred -------CCCEEEECCcch--h----hhhHHHHHHHHHhcC
Confidence 566666543321 1 122456888888876
No 462
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.95 E-value=81 Score=25.77 Aligned_cols=60 Identities=15% Similarity=0.125 Sum_probs=38.5
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCC-HHHHHHHHH-HHHhcCe-EEEEeccccc
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMS-RNELNLLVN-IITEKNI-HLISDEIYSG 235 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s-~e~l~~l~~-~~~~~~~-~iI~Deay~~ 235 (469)
...+.+.|.+.++++ ++..+++-.|-|..|..-. ....+.++. ++.+.++ ++.+||.|..
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 345678888888764 8899999999766665422 222345554 3334564 4567998863
No 463
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=28.68 E-value=2.8e+02 Score=23.78 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...+++|.|+...=..+...|.+.|..|++..-.-...........+.+++..++. |.+.+++.++. .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-------~~~~~~~~~~~----~ 74 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLG-------DWEATERALGS----V 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTT-------CHHHHHHHHTT----C
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCC-------CHHHHHHHHHH----c
Confidence 445677776665555566667777887777654332222222222225555533322 56777776652 1
Q ss_pred CceeEEEEecCC-CCCC--CCCCHHHHHHHHH
Q 043923 190 LKVKGVLVTNPS-NPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~ 218 (469)
.++..+| ++.. ...+ .-.+.+++++..+
T Consensus 75 ~~id~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 3d3w_A 75 GPVDLLV-NNAAVALLQPFLEVTKEAFDRSFE 105 (244)
T ss_dssp CCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCccCCCcchhhCCHHHHHHHHH
Confidence 2456544 4332 2212 1235566555554
No 464
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=28.64 E-value=3.1e+02 Score=24.34 Aligned_cols=100 Identities=12% Similarity=0.158 Sum_probs=48.5
Q ss_pred CcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 112 SKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 112 ~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
..++||.|+ ...=..+...|.+.|..|++..-.-.. ....+....+. +..+++|- -|.+.+++.++....
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl-----~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGS-DLVVKCDV-----SLDEDIKNLKKFLEE 95 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 346666654 333344556666778777765432220 11111111132 33444442 156777777766544
Q ss_pred cCCceeEEEEecCC-CCC----CC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NPL----GT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NPt----G~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. .+. +. ..+.+++++..+
T Consensus 96 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 132 (285)
T 2p91_A 96 NWGSLDIIV-HSIAYAPKEEFKGGVIDTSREGFKIAMD 132 (285)
T ss_dssp HTSCCCEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 444667544 4442 221 11 356677666655
No 465
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=28.48 E-value=1.2e+02 Score=28.46 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=32.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccccc
Q 043923 200 PSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYSGT 236 (469)
Q Consensus 200 P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~~~ 236 (469)
-++|.|...+.+.+.++++.|+++|+.|++|--|++.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 4778888899999999999999999999999666544
No 466
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=28.34 E-value=3e+02 Score=23.99 Aligned_cols=104 Identities=16% Similarity=0.145 Sum_probs=54.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC---CCCEEEEccCCCcChHHHHhhh----CCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 111 TSKIVLTAGATSANETLMFCLAE---PGEAFLLPTPYYPGFDRDLKWR----TGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~---~gd~Vl~~~P~y~~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
...++||.|+...=..+...|.+ .|..|++..-.-.......... .|.++..+.+|- -|.+.+++.++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 80 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL-----GTEAGVQRLLS 80 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT-----TSHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCC-----CCHHHHHHHHH
Confidence 34466666655554556666776 7888877653322222211111 155677777653 25677887777
Q ss_pred HHHh--cCCcee-EEEEecCCC--CC-CCC---CCHHHHHHHHHH
Q 043923 184 LAQK--RHLKVK-GVLVTNPSN--PL-GTT---MSRNELNLLVNI 219 (469)
Q Consensus 184 ~~~~--~~~~~~-~vvl~~P~N--Pt-G~~---~s~e~l~~l~~~ 219 (469)
.... ...+.. .++++|... +. +.. .+.+++++..+.
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 6543 112233 245555532 21 111 567777776653
No 467
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=28.30 E-value=89 Score=28.93 Aligned_cols=57 Identities=18% Similarity=0.139 Sum_probs=33.6
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc---CeEEEE
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK---NIHLIS 229 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~---~~~iI~ 229 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+. ++.||.
T Consensus 29 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTF--PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 3457888887777654332 45555443 222223567788888888877664 345554
No 468
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=28.16 E-value=1.2e+02 Score=27.51 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=48.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEcc-CCCc---ChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPT-PYYP---GFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLA 185 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-P~y~---~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 185 (469)
.|+||.|+...=..++..|.+.|..|.+.. ..-. .-... +... |++++..++. |.+.+.++++
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~-------d~~~l~~~~~-- 75 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GAKLIEASLD-------DHQRLVDALK-- 75 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT-TCEEECCCSS-------CHHHHHHHHT--
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhC-CeEEEeCCCC-------CHHHHHHHHh--
Confidence 577776533333344455656665555433 2211 11111 1223 6666654432 5678887775
Q ss_pred HhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 186 QKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 186 ~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
++..||.+......+. ....-..+++.|++.+
T Consensus 76 -----~~d~vi~~a~~~~~~~--~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 76 -----QVDVVISALAGGVLSH--HILEQLKLVEAIKEAG 107 (313)
T ss_dssp -----TCSEEEECCCCSSSST--TTTTHHHHHHHHHHSC
T ss_pred -----CCCEEEECCccccchh--hHHHHHHHHHHHHhcC
Confidence 5666665543221111 2223467888898887
No 469
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=28.03 E-value=3e+02 Score=23.97 Aligned_cols=101 Identities=18% Similarity=0.260 Sum_probs=53.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHH---HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHh
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRD---LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQK 187 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 187 (469)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+.+|- -|.+++++.++....
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHV-----GKAEDRERLVAMAVN 87 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34567766655555566667778887777654322212111 2222 55566666552 256777776665433
Q ss_pred cCCceeEEEEecCC-CC-CCC--CCCHHHHHHHHH
Q 043923 188 RHLKVKGVLVTNPS-NP-LGT--TMSRNELNLLVN 218 (469)
Q Consensus 188 ~~~~~~~vvl~~P~-NP-tG~--~~s~e~l~~l~~ 218 (469)
...++..+| +|.. .+ .+. -.+.++++++.+
T Consensus 88 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 88 LHGGVDILV-SNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HHSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 334566544 4432 22 222 246667666655
No 470
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=28.03 E-value=3.9e+02 Score=27.20 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=50.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChHHHHhhhCCCEEEEeeccCCCCcccCH-HHHHHHHHHHHhcCC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFDRDLKWRTGVEIVPIQCTSLNGFQITE-TAIEEAYQLAQKRHL 190 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~i~~~~~~~~ 190 (469)
.++||.|++..=..+...|.+.|-.|++.+- .-......+... |.+++.+.+ |+ ++.++.++.......
T Consensus 324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~-g~~~~~~~~--------Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA-GGEAWPDQH--------DVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCEEEEECC--------CHHHHHHHHHHHHHHHHS
T ss_pred eEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhc-CCeEEEEEc--------ChHHHHHHHHHHHHHhcC
Confidence 4556655555555566667788988887642 111112223333 666665543 44 444444443333333
Q ss_pred ceeEEEEecCC-CCCC--CCCCHHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NPLG--TTMSRNELNLLVNI 219 (469)
Q Consensus 191 ~~~~vvl~~P~-NPtG--~~~s~e~l~~l~~~ 219 (469)
+..+ +++|-. ...+ .-++.++++++.++
T Consensus 395 ~iDi-LVnNAGi~~~~~~~~~~~~~~~~~~~v 425 (604)
T 2et6_A 395 TIDI-LVNNAGILRDRSFAKMSKQEWDSVQQV 425 (604)
T ss_dssp CCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 5664 555542 2222 23678888887764
No 471
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.98 E-value=3.1e+02 Score=24.16 Aligned_cols=101 Identities=13% Similarity=0.062 Sum_probs=50.3
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+ ...=..+...|.+.|..|++..-.-.. ....+....+ .+..+.+|- -|.+.+++.++...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~-----~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDV-----SKEEHFKSLYNSVK 79 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456777665 343445556677888877765433221 1111211113 133344442 25677777776654
Q ss_pred hcCCceeEEEEecCC-CCC----CC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPL----GT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPt----G~--~~s~e~l~~l~~ 218 (469)
....++.. +++|.. .+. +. -.+.+++++..+
T Consensus 80 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T 2pd4_A 80 KDLGSLDF-IVHSVAFAPKEALEGSLLETSKSAFNTAME 117 (275)
T ss_dssp HHTSCEEE-EEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCccCccccCCCCcccCCHHHHHHHHH
Confidence 44446665 444442 211 11 346667666555
No 472
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=27.96 E-value=77 Score=29.41 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=33.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 170 GFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 170 ~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
+..+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+.
T Consensus 23 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDA--GSDGLCIL-ANFSEQFAITDDERDVLTRTILEH 73 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccCcccCCHHHHHHHHHHHHHH
Confidence 3468888888888765443 55555543 233334568888888888887664
No 473
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=27.95 E-value=3e+02 Score=23.98 Aligned_cols=82 Identities=15% Similarity=0.282 Sum_probs=44.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHH---HHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhc
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDR---DLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKR 188 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 188 (469)
..++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+++|- -|.+.+++.++.....
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDS-----SQESEVRSLFEQVDRE 79 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 346666665554456667777888888775433221111 12223 55677777653 2567777777654332
Q ss_pred -CCceeEEEEecC
Q 043923 189 -HLKVKGVLVTNP 200 (469)
Q Consensus 189 -~~~~~~vvl~~P 200 (469)
..++..+ ++|.
T Consensus 80 ~~g~id~l-vnnA 91 (260)
T 2qq5_A 80 QQGRLDVL-VNNA 91 (260)
T ss_dssp HTTCCCEE-EECC
T ss_pred cCCCceEE-EECC
Confidence 3356654 4443
No 474
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=27.92 E-value=2.9e+02 Score=24.81 Aligned_cols=102 Identities=15% Similarity=0.106 Sum_probs=51.9
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhcCCCCEEEEccCCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 110 DTSKIVLTAGAT--SANETLMFCLAEPGEAFLLPTPYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 110 ~~~~i~~t~G~~--~al~~~~~~l~~~gd~Vl~~~P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
+...++||.|+. ..=..+...|.+.|..|++..-.-... ....... +. +..+.+|- -|.+.+++.+++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~Dv-----~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GV-KLTVPCDV-----SDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TC-CEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CC-eEEEEcCC-----CCHHHHHHHHHH
Confidence 344577777653 333345566777888777765432111 1112222 22 34455442 256777777766
Q ss_pred HHhcCCceeEEEEecCC-CCC----C--CCCCHHHHHHHHHH
Q 043923 185 AQKRHLKVKGVLVTNPS-NPL----G--TTMSRNELNLLVNI 219 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P~-NPt----G--~~~s~e~l~~l~~~ 219 (469)
......++..+ ++|.. .+. + .-.+.+++++..+.
T Consensus 102 ~~~~~g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~~~~~v 142 (296)
T 3k31_A 102 LAEEWGSLDFV-VHAVAFSDKNELKGRYVDTSLGNFLTSMHI 142 (296)
T ss_dssp HHHHHSCCSEE-EECCCCCCHHHHTSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCcCCcccccCChhhCCHHHHHHHHHH
Confidence 54443466754 44442 211 1 23566777666653
No 475
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.91 E-value=1.3e+02 Score=27.50 Aligned_cols=48 Identities=10% Similarity=0.184 Sum_probs=25.1
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 17 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~ 64 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDN--GTDAILVC-GTTGESPTLTFEEHEKVIEFAVK 64 (294)
T ss_dssp EECHHHHHHHHHHHHTT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHC--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 46666666666543322 44444432 22222345666666666666554
No 476
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=27.69 E-value=1.4e+02 Score=24.95 Aligned_cols=61 Identities=7% Similarity=-0.150 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHH
Q 043923 119 GATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQL 184 (469)
Q Consensus 119 G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 184 (469)
++.+.+..++..+.+.-|.|++..|............ ....+-+++..+. .+ ..+...++.
T Consensus 60 ~~~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~l~-~ad~viiv~~~~~---~~-~~~~~~~~~ 120 (206)
T 4dzz_A 60 AASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVM-VSDLVIIPVTPSP---LD-FSAAGSVVT 120 (206)
T ss_dssp CCSHHHHHTHHHHTTTSSEEEEECCSSSSHHHHHHHH-HCSEEEEEECSCT---TT-HHHHHHHHH
T ss_pred cCcHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHH-HCCEEEEEecCCH---HH-HHHHHHHHH
Confidence 3346677777777777799999998655433222222 3455555555332 24 445544443
No 477
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=27.68 E-value=36 Score=33.46 Aligned_cols=28 Identities=29% Similarity=0.560 Sum_probs=25.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 202 NPLGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 202 NPtG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
+|.|..++.+++++|++.|+++|+-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4667899999999999999999998885
No 478
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=27.61 E-value=2.6e+02 Score=23.05 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=54.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCC--CCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCLAEP--GEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l~~~--gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++++.+.+..-+..+..++..+...+ -+.++...|.+..............+.-+.-.. +-.+.++..+...+...
T Consensus 99 ~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~--D~~v~~~~~~~~~~~l~ 176 (209)
T 3og9_A 99 LDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPN--DMIVPQKNFGDLKGDLE 176 (209)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTT--CSSSCHHHHHHHHHHHH
T ss_pred CCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccccccccCCCEEEEcCCC--CCccCHHHHHHHHHHHH
Confidence 45677776655555555554444333 356776666554322111111144554444332 22344444443333333
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhc
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEK 223 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~ 223 (469)
..+.++.. ... |.|..++.++++++.++..++
T Consensus 177 ~~~~~~~~--~~~---~~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 177 DSGCQLEI--YES---SLGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp HTTCEEEE--EEC---SSTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCceEE--EEc---CCCCcCCHHHHHHHHHHHHhh
Confidence 33323333 222 357778899999999887764
No 479
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.58 E-value=1.8e+02 Score=21.34 Aligned_cols=90 Identities=11% Similarity=0.136 Sum_probs=49.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCc
Q 043923 113 KIVLTAGATSANETLMFCLAEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLK 191 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 191 (469)
.|+++.++.-+..++ ..|...| ..|.+.+..-... ..+... ++..+..... +.+.+++.+. +
T Consensus 7 ~v~I~G~G~iG~~~~-~~l~~~g~~~v~~~~r~~~~~-~~~~~~-~~~~~~~d~~-------~~~~~~~~~~-------~ 69 (118)
T 3ic5_A 7 NICVVGAGKIGQMIA-ALLKTSSNYSVTVADHDLAAL-AVLNRM-GVATKQVDAK-------DEAGLAKALG-------G 69 (118)
T ss_dssp EEEEECCSHHHHHHH-HHHHHCSSEEEEEEESCHHHH-HHHHTT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred eEEEECCCHHHHHHH-HHHHhCCCceEEEEeCCHHHH-HHHHhC-CCcEEEecCC-------CHHHHHHHHc-------C
Confidence 566665555555444 4455566 5666655433222 222233 6666554432 4566666654 5
Q ss_pred eeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q 043923 192 VKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLI 228 (469)
Q Consensus 192 ~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI 228 (469)
+..|+.+-|.. .-..+++.|.+.++..+
T Consensus 70 ~d~vi~~~~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 70 FDAVISAAPFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CSEEEECSCGG---------GHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCch---------hhHHHHHHHHHhCCCEE
Confidence 67777665421 13567888888887654
No 480
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=27.50 E-value=3e+02 Score=24.05 Aligned_cols=101 Identities=14% Similarity=0.094 Sum_probs=48.5
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcC--hHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 111 TSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPG--FDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 111 ~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
...++||.|+ ...=..+...|.+.|..|++..-.-.. ....+....+. +..+++|- -|.+.+++.++...
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG-ALLFRADV-----TQDEELDALFAGVK 81 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTC-CEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEECCC-----CCHHHHHHHHHHHH
Confidence 3457777665 333344555666778777765432210 11111111132 33444442 25677777776544
Q ss_pred hcCCceeEEEEecCC-CCC----CC--CCCHHHHHHHHH
Q 043923 187 KRHLKVKGVLVTNPS-NPL----GT--TMSRNELNLLVN 218 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~-NPt----G~--~~s~e~l~~l~~ 218 (469)
....++.. +++|.. .+. +. ..+.+++++..+
T Consensus 82 ~~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (261)
T 2wyu_A 82 EAFGGLDY-LVHAIAFAPREAMEGRYIDTRRQDWLLALE 119 (261)
T ss_dssp HHHSSEEE-EEECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 33346665 444442 221 21 346667666655
No 481
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=27.44 E-value=2.4e+02 Score=27.62 Aligned_cols=98 Identities=14% Similarity=0.135 Sum_probs=49.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccCC--CcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTPY--YPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~--y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
.++||.|+...=..+...|.+.|-.|++..-. -.......... +..++.+++. |.+++++.++.......
T Consensus 215 ~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-~~~~~~~Dvt-------d~~~v~~~~~~~~~~~g 286 (454)
T 3u0b_A 215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-GGTALTLDVT-------ADDAVDKITAHVTEHHG 286 (454)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-TCEEEECCTT-------STTHHHHHHHHHHHHST
T ss_pred EEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-CCeEEEEecC-------CHHHHHHHHHHHHHHcC
Confidence 35555554444445556677778777765321 11112223334 6666555443 44566666655433332
Q ss_pred -ceeEEEEecCCCCCC--CCCCHHHHHHHHH
Q 043923 191 -KVKGVLVTNPSNPLG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 -~~~~vvl~~P~NPtG--~~~s~e~l~~l~~ 218 (469)
++..+|-+--....+ .-++.+++++..+
T Consensus 287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~ 317 (454)
T 3u0b_A 287 GKVDILVNNAGITRDKLLANMDEKRWDAVIA 317 (454)
T ss_dssp TCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCcccCCCccccCCHHHHHHHHH
Confidence 367544332222223 2357777777665
No 482
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=27.39 E-value=2.3e+02 Score=25.72 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCC
Q 043923 91 FKKALVEFMSEIRGNKVTFDTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNG 170 (469)
Q Consensus 91 Lr~aia~~l~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~ 170 (469)
|++.|.-+.. -+|.+..|+|-+=.++ ..| .+..|...++.. |.+.+.+.- +.
T Consensus 82 l~ekI~l~~~-----------~gV~v~~GGTlfE~~l-----~qg--------~~~~yl~~~k~l-GF~~IEISd---Gt 133 (276)
T 1u83_A 82 LEEKISTLKE-----------HDITFFFGGTLFEKYV-----SQK--------KVNEFHRYCTYF-GCEYIEISN---GT 133 (276)
T ss_dssp HHHHHHHHHH-----------TTCEEEECHHHHHHHH-----HTT--------CHHHHHHHHHHT-TCSEEEECC---SS
T ss_pred HHHHHHHHHH-----------cCCeEeCCcHHHHHHH-----HcC--------cHHHHHHHHHHc-CCCEEEECC---Cc
Confidence 7777766543 3478889987433322 233 466788889888 999999973 45
Q ss_pred cccCHHHHHHHHHHHHhcCCceeEEEEecC--CCC-CCCCCCHHHHHHHHHHHHhcCeEEEEeccc
Q 043923 171 FQITETAIEEAYQLAQKRHLKVKGVLVTNP--SNP-LGTTMSRNELNLLVNIITEKNIHLISDEIY 233 (469)
Q Consensus 171 ~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P--~NP-tG~~~s~e~l~~l~~~~~~~~~~iI~Deay 233 (469)
..++.++..+.|+.. +..+.+++.- -+| .....+++++.+.++.+-+.|+..|+=|+-
T Consensus 134 i~l~~~~~~~lI~~a-----~~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaR 194 (276)
T 1u83_A 134 LPMTNKEKAAYIADF-----SDEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEAR 194 (276)
T ss_dssp SCCCHHHHHHHHHHH-----TTTSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC--
T ss_pred ccCCHHHHHHHHHHH-----HhhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 567888888888764 2223344433 233 345678888888888888889888877774
No 483
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=27.37 E-value=1.1e+02 Score=28.26 Aligned_cols=27 Identities=7% Similarity=0.017 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 208 MSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 208 ~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
.+.++.++|+++++++|..+.+-.-+.
T Consensus 107 ~~~~ea~~l~~~a~~~g~~~~v~~~~R 133 (312)
T 3o9z_A 107 LWPEEIARLKELEARTGRRVYTVLQLR 133 (312)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEECCGGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeehh
Confidence 578999999999999999887765543
No 484
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=27.33 E-value=3.1e+02 Score=23.92 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcCh---HHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHH
Q 043923 109 FDTSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPGF---DRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQ 183 (469)
Q Consensus 109 ~~~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 183 (469)
+....++||.|+ +..=..+...|.+.|..|++..-.-..- ........+.++..+.+|-. |.+.+++.++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 79 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-----NDAEIETCFA 79 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-----SSHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-----CHHHHHHHHH
Confidence 344557777765 3244445566777888877764332111 11122221214555555421 4566776666
Q ss_pred HHHhcCCceeEEEEecCCC-C----CC--CCCCHHHHHHHHH
Q 043923 184 LAQKRHLKVKGVLVTNPSN-P----LG--TTMSRNELNLLVN 218 (469)
Q Consensus 184 ~~~~~~~~~~~vvl~~P~N-P----tG--~~~s~e~l~~l~~ 218 (469)
+......++..+ ++|... + .+ .-.+.+++++..+
T Consensus 80 ~~~~~~g~id~l-i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 120 (266)
T 3oig_A 80 SIKEQVGVIHGI-AHCIAFANKEELVGEYLNTNRDGFLLAHN 120 (266)
T ss_dssp HHHHHHSCCCEE-EECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HHHHHhCCeeEE-EEccccccccccccchhhccHHHHHHHHH
Confidence 544433456654 444422 2 12 1246666655544
No 485
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.27 E-value=1.7e+02 Score=26.76 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=48.7
Q ss_pred EEEeCCh---HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 114 IVLTAGA---TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 114 i~~t~G~---~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
|+++.|+ .+++..+-.+---.-|.|++..|.|.... .+.+.+..+......
T Consensus 76 viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~-------------------------~~~l~~~f~~va~a~- 129 (293)
T 1f6k_A 76 LIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFS-------------------------FPEIKHYYDTIIAET- 129 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-------------------------HHHHHHHHHHHHHHH-
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-------------------------HHHHHHHHHHHHHhC-
Confidence 6665554 66666554433223388888888874321 122222222211111
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDE 231 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~De 231 (469)
...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 130 ~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 166 (293)
T 1f6k_A 130 GSNMIVYSIPF-LTGVNMGIEQFGELYK---NPKVLGVKFT 166 (293)
T ss_dssp CCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCEEEEECcc-ccCcCCCHHHHHHHhc---CCCEEEEEEC
Confidence 44677888776 4899999998766653 2355555554
No 486
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=27.24 E-value=2.3e+02 Score=25.07 Aligned_cols=82 Identities=13% Similarity=0.063 Sum_probs=41.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEccC-CCcChHHHHhh---hCCCEEEEeeccCCCCcccCH----HHHHHHHHH
Q 043923 113 KIVLTAGATSANETLMFCLAEPGEAFLLPTP-YYPGFDRDLKW---RTGVEIVPIQCTSLNGFQITE----TAIEEAYQL 184 (469)
Q Consensus 113 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P-~y~~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~----~~l~~~i~~ 184 (469)
.++||.|+...=..+...|.+.|..|++..- .-......... ..|.++..+.+|-. |. +.+++.++.
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIIDC 87 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHHH
Confidence 4666666555445666677788887777543 21111111111 11445555555421 34 666666655
Q ss_pred HHhcCCceeEEEEecC
Q 043923 185 AQKRHLKVKGVLVTNP 200 (469)
Q Consensus 185 ~~~~~~~~~~vvl~~P 200 (469)
......++..+ ++|.
T Consensus 88 ~~~~~g~id~l-v~nA 102 (276)
T 1mxh_A 88 SFRAFGRCDVL-VNNA 102 (276)
T ss_dssp HHHHHSCCCEE-EECC
T ss_pred HHHhcCCCCEE-EECC
Confidence 43333356654 4444
No 487
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=27.15 E-value=1.4e+02 Score=25.40 Aligned_cols=58 Identities=21% Similarity=0.337 Sum_probs=41.9
Q ss_pred HHHHHHHhCCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhccccccccccccccccccc
Q 043923 379 LWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLKLSMQRLKAFVDSITTTLHNQSNHQSIKNSRRR 450 (469)
Q Consensus 379 l~~~ll~~~GI~v~pg~~f~~~~~~~iRi~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 450 (469)
..+..+.+.++.+.|-. ....+||.+..+|+|.-++++...++..++.+- +|.|+||-
T Consensus 77 ~IekAI~~SdLglnP~~-----dG~~Iri~iP~lTeErRkelvK~~k~~~E~aKv---------aiRniRrd 134 (185)
T 1dd5_A 77 LIEKAINASDLGLNPIN-----DGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKI---------AIRNIRRE 134 (185)
T ss_dssp HHHHHHHHSSSCCCCEE-----CSSCEEEECCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
T ss_pred HHHHHHHHcCCCCCccc-----CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
Confidence 34555556677776653 245799999878999999999999888777664 66666653
No 488
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=27.12 E-value=2.2e+02 Score=25.54 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=20.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcc
Q 043923 111 TSKIVLTAGATSANETLMFCLAEPGEAFLLPT 142 (469)
Q Consensus 111 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~ 142 (469)
...++||.|+...=..+...|.+.|..|++..
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEc
Confidence 34566666665555566667778888777654
No 489
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=27.08 E-value=79 Score=29.13 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 175 ETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 175 ~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
.+.++++++. +++.+++.. +| ++.++.+++.+.|+++++.++-..+..
T Consensus 85 ~~~v~ea~~~------Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~viGPNc~G 132 (297)
T 2yv2_A 85 PDAVYEAVDA------GIRLVVVIT----EG--IPVHDTMRFVNYARQKGATIIGPNCPG 132 (297)
T ss_dssp HHHHHHHHHT------TCSEEEECC----CC--CCHHHHHHHHHHHHHHTCEEECSSSCE
T ss_pred HHHHHHHHHC------CCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEcCCCCe
Confidence 4555555554 677555432 34 366778899999999999888777554
No 490
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=26.95 E-value=5.3e+02 Score=26.44 Aligned_cols=107 Identities=7% Similarity=0.036 Sum_probs=59.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHh----cCCC-CEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCC-cccCHHHHHHHH
Q 043923 109 FDTSKIVLTAGATSANETLMFCL----AEPG-EAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNG-FQITETAIEEAY 182 (469)
Q Consensus 109 ~~~~~i~~t~G~~~al~~~~~~l----~~~g-d~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~-~~~d~~~l~~~i 182 (469)
++++.|.++.++..++...++.| ...+ ...+...|.|. + . |+ -+++ ... | +.++.+++.|
T Consensus 43 i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~-~------R-G~---mlD~--sR~~f-~~~~~ik~~i 108 (627)
T 2epl_X 43 GRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYE-D------L-AY---MADC--SRNAV-LNLSSAKKMI 108 (627)
T ss_dssp EETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCS-E------E-EE---EEEC--SSSCC-BCHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCC-c------c-ce---EEec--CCCCC-CCHHHHHHHH
Confidence 56777888766665555555544 2222 34455555553 1 1 22 2222 122 2 4677777777
Q ss_pred HHHHhcCCceeEEEEe----cCCCC----CCCCCCHHHHHHHHHHHHhcCeEEEE
Q 043923 183 QLAQKRHLKVKGVLVT----NPSNP----LGTTMSRNELNLLVNIITEKNIHLIS 229 (469)
Q Consensus 183 ~~~~~~~~~~~~vvl~----~P~NP----tG~~~s~e~l~~l~~~~~~~~~~iI~ 229 (469)
+......-++=.+-++ .+..| .|..++.+++++|++.|+++|+-||-
T Consensus 109 d~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 109 EVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 6432221122112222 22333 46789999999999999999998875
No 491
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.94 E-value=1.2e+02 Score=27.66 Aligned_cols=48 Identities=15% Similarity=0.286 Sum_probs=24.4
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 17 ~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~ 64 (289)
T 2yxg_A 17 EVDFDGLEENINFLIEN--GVSGIVAV-GTTGESPTLSHEEHKKVIEKVVD 64 (289)
T ss_dssp EECHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHC--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 46666666665543332 34444432 22223345666666666665554
No 492
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.94 E-value=1.1e+02 Score=28.99 Aligned_cols=48 Identities=13% Similarity=0.114 Sum_probs=23.1
Q ss_pred ccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 172 QITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 172 ~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
.+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 48 ~ID~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve 95 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKA--GVDGLFFL-GSGGEFSQLGAEERKAIARFAID 95 (343)
T ss_dssp SBCHHHHHHHHHHHHHT--TCSCEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEeC-ccccChhhCCHHHHHHHHHHHHH
Confidence 46666666655543322 34433332 22222344566666666665544
No 493
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=26.83 E-value=57 Score=30.07 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=27.1
Q ss_pred ceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecccc
Q 043923 191 KVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISDEIYS 234 (469)
Q Consensus 191 ~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~Deay~ 234 (469)
+++.+++.. +| ++.++.+++.+.|+++++.++-..+..
T Consensus 94 Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~viGPNc~G 131 (294)
T 2yv1_A 94 GIELIVVIT----EH--IPVHDTMEFVNYAEDVGVKIIGPNTPG 131 (294)
T ss_dssp TCSEEEECC----SC--CCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred CCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEcCCCce
Confidence 677555432 34 366778899999999999888777554
No 494
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=26.68 E-value=2.5e+02 Score=25.62 Aligned_cols=94 Identities=16% Similarity=0.097 Sum_probs=48.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcC
Q 043923 110 DTSKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRH 189 (469)
Q Consensus 110 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 189 (469)
+...|+||.|+...=..++..|.+.|..|++..-.-.. . +++++..++. |.+.+.+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~-~~~~~~~Dl~-------d~~~~~~~~~------ 76 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------T-GGEEVVGSLE-------DGQALSDAIM------ 76 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------S-CCSEEESCTT-------CHHHHHHHHT------
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------C-CccEEecCcC-------CHHHHHHHHh------
Confidence 34568887775444455666677777666654322211 2 5666554432 5677777765
Q ss_pred CceeEEEEecCC-CCCCCCC------CHHHHHHHHHHHHhcCe
Q 043923 190 LKVKGVLVTNPS-NPLGTTM------SRNELNLLVNIITEKNI 225 (469)
Q Consensus 190 ~~~~~vvl~~P~-NPtG~~~------s~e~l~~l~~~~~~~~~ 225 (469)
++..|+-+-.. .++.... ...-...+++.|.+.++
T Consensus 77 -~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 77 -GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp -TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred -CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56666644322 2111110 01123567888888764
No 495
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.65 E-value=1.5e+02 Score=24.25 Aligned_cols=56 Identities=18% Similarity=0.089 Sum_probs=36.8
Q ss_pred HhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcC
Q 043923 152 LKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKN 224 (469)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~ 224 (469)
++.. |.+++.+..+ ..++++.+++.+. ++.+|.++.-.. ...+.+.++++.+++.+
T Consensus 42 l~~~-G~eVi~lG~~------~p~e~lv~aa~~~-----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 42 LRDA-GFEVVYTGLR------QTPEQVAMAAVQE-----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHT-TCEEECCCSB------CCHHHHHHHHHHT-----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHC-CCEEEECCCC------CCHHHHHHHHHhc-----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 3444 8888876543 4667777776653 777777764432 34567888888887754
No 496
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.61 E-value=1.6e+02 Score=26.32 Aligned_cols=101 Identities=13% Similarity=0.183 Sum_probs=50.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhC-CCEEEEeeccCCCCcccCHHHHHHHHHHHHhcCC
Q 043923 112 SKIVLTAGATSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRT-GVEIVPIQCTSLNGFQITETAIEEAYQLAQKRHL 190 (469)
Q Consensus 112 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 190 (469)
..++||.|+...=..+...|.+.|..|++..-.-........... ..++..+.+|- -|.+.+++.++.......
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHhC
Confidence 345666555444445556677788887775433222222222210 12455555542 256788887765433333
Q ss_pred ceeEEEEecCC-CC-CC--CCCCHHHHHHHHH
Q 043923 191 KVKGVLVTNPS-NP-LG--TTMSRNELNLLVN 218 (469)
Q Consensus 191 ~~~~vvl~~P~-NP-tG--~~~s~e~l~~l~~ 218 (469)
++..+ ++|.. .+ .+ .-.+.++++++.+
T Consensus 97 ~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~~ 127 (272)
T 2nwq_A 97 TLRGL-INNAGLALGTDPAQSCDLDDWDTMVD 127 (272)
T ss_dssp SCCEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCCcccCCHHHHHHHHH
Confidence 56654 44442 11 12 1346677666655
No 497
>3l2f_A Glycocyamine kinase beta chain; phosphagen kinase, transition state ANA kinase, transferase; HET: ADP; 2.30A {Namalycastis SP} PDB: 3l2e_B 3l2d_A* 3l2g_A* 3l2e_A
Probab=26.58 E-value=2.7e+02 Score=26.73 Aligned_cols=74 Identities=8% Similarity=0.090 Sum_probs=42.7
Q ss_pred EEEEecccccccCChhHHHHHHHHHHHhCCeEEeCCCCCCCC-CCCeEEEEeec---CCH-HHHHHHHHHHHHHHHhhcc
Q 043923 359 FCWVDMRHLLRSNTFEAEMELWKKIVYDVKLNISPGSSCHCT-EPGWFRVCFAN---MSE-DTLKLSMQRLKAFVDSITT 433 (469)
Q Consensus 359 ~~~v~~~~~~~~~~~~~~~~l~~~ll~~~GI~v~pg~~f~~~-~~~~iRi~~~~---~~~-e~i~~~l~~L~~~l~~~~~ 433 (469)
-+.+.+|....... +..++.+.|+.++.-..=+.. ..+.+.||=.. .++ +.++.+.+.++++++..++
T Consensus 305 SV~lhLP~L~~~~~-------~~~il~klgLqvRG~~Ge~s~a~G~iydISN~~~LG~SE~eiV~~l~~~v~~LIe~Ek~ 377 (390)
T 3l2f_A 305 SVHLRLAFLEKHPR-------FDEMLGKLRLGKRGTGGESSLATDSTYDISNWARLGKSERELVQVLVDGVNLLIACDKK 377 (390)
T ss_dssp EEEEECTTGGGCTT-------HHHHHHHTTEEEEBTTBTTSCCBTTEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccchhhH-------HHHHHHHcCeEEecCCCCCCcccCCEEEEecccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46677886544322 344567889999843211111 13456665422 255 5556666777888887777
Q ss_pred cccccc
Q 043923 434 TLHNQS 439 (469)
Q Consensus 434 ~~~~~~ 439 (469)
.-.+|+
T Consensus 378 le~g~~ 383 (390)
T 3l2f_A 378 LEAGQS 383 (390)
T ss_dssp HHTTCC
T ss_pred HhcCCC
Confidence 655553
No 498
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.51 E-value=43 Score=32.80 Aligned_cols=27 Identities=15% Similarity=0.258 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccccc
Q 043923 209 SRNELNLLVNIITEKNIHLISDEIYSG 235 (469)
Q Consensus 209 s~e~l~~l~~~~~~~~~~iI~Deay~~ 235 (469)
+.+++++|++.|+++|+-||+|-++-+
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH 94 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHH 94 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 589999999999999999999998753
No 499
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=26.48 E-value=2.5e+02 Score=22.46 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=61.9
Q ss_pred CCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEccCCCcChHHHHhhhCCCEEEEeeccCCCCcccCHHHHHHHHHHHH
Q 043923 109 FDTSKIVLTAGA--TSANETLMFCLAEPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIQCTSLNGFQITETAIEEAYQLAQ 186 (469)
Q Consensus 109 ~~~~~i~~t~G~--~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 186 (469)
++...++++-+. ...+.-+...|.+-|-+++....+. ..++.. |+.+..+.--.+++-.-+...+.+.|.+
T Consensus 22 lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GTa----~~L~~~-Gi~v~~v~k~~egg~~~~~~~i~d~i~~-- 94 (143)
T 2yvq_A 22 IPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATS----DWLNAN-NVPATPVAWPSQEGQNPSLSSIRKLIRD-- 94 (143)
T ss_dssp CCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHH----HHHHHT-TCCCEEECCGGGC-----CBCHHHHHHT--
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchHH----HHHHHc-CCeEEEEEeccCCCcccccccHHHHHHC--
Confidence 444457777665 5555556677777888877766443 344455 8888777532222100000124444443
Q ss_pred hcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q 043923 187 KRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITEKNIHLISD 230 (469)
Q Consensus 187 ~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~~~~~iI~D 230 (469)
.++.+|| +.|. +..-+..+-..|.+.|-+|++.++..
T Consensus 95 ---g~i~lVI-nt~~---~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 95 ---GSIDLVI-NLPN---NNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ---TSCCEEE-ECCC---CCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ---CCceEEE-ECCC---CCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 2677644 4443 21223667778888999999988754
No 500
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.44 E-value=1.4e+02 Score=27.31 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHHHhcCCceeEEEEecCCCCCCCCCCHHHHHHHHHHHHh
Q 043923 173 ITETAIEEAYQLAQKRHLKVKGVLVTNPSNPLGTTMSRNELNLLVNIITE 222 (469)
Q Consensus 173 ~d~~~l~~~i~~~~~~~~~~~~vvl~~P~NPtG~~~s~e~l~~l~~~~~~ 222 (469)
+|.+.+++.++..... .+..++++ -++=-+..++.+|.+++++.+.+
T Consensus 19 iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~ 65 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKS--KTDAIIVC-GTTGEATTMTETERKETIKFVID 65 (291)
T ss_dssp BCHHHHHHHHHHHHHT--TCCEEEES-SGGGTGGGSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 6666666665543332 34444432 22222334666666666665554
Done!