Your job contains 1 sequence.
>043928
MGKYELDIQGNNMKVTVVDHAALIDDNVAALKALLKRQRVVGIDVKFNHRCTKKAEMLIL
CAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDGLGRCNLRCKTAVELGHF
AARVLKKPHISSFGLAKLAREVGIHNSLASGFNGYAPSWSARAFSNEQIKFAVHEAFAYY
VIGDRVLSSLDA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043928
(192 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053519 - symbol:AT2G36110 species:3702 "Arabi... 174 2.7e-13 1
TAIR|locus:2092497 - symbol:AT3G12420 species:3702 "Arabi... 135 4.2e-13 2
TAIR|locus:2092482 - symbol:AT3G12410 species:3702 "Arabi... 135 4.6e-08 1
TAIR|locus:2092457 - symbol:AT3G12460 species:3702 "Arabi... 122 4.5e-07 2
TAIR|locus:2092507 - symbol:AT3G12430 species:3702 "Arabi... 124 2.5e-06 1
TAIR|locus:2092472 - symbol:AT3G12470 species:3702 "Arabi... 121 4.9e-06 1
TAIR|locus:2092442 - symbol:AT3G12440 species:3702 "Arabi... 108 7.1e-06 2
TAIR|locus:2095994 - symbol:AT3G62320 species:3702 "Arabi... 105 9.8e-06 2
UNIPROTKB|F1NAR0 - symbol:F1NAR0 "Uncharacterized protein... 119 0.00020 1
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe... 116 0.00049 1
TAIR|locus:2156243 - symbol:AT5G48350 species:3702 "Arabi... 104 0.00062 1
>TAIR|locus:2053519 [details] [associations]
symbol:AT2G36110 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002685 GO:GO:0016740
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:AC007135 EMBL:AY649245 IPI:IPI00518056 PIR:A84777
RefSeq:NP_181155.1 UniGene:At.37587 ProteinModelPortal:Q9SIH3
SMR:Q9SIH3 PRIDE:Q9SIH3 EnsemblPlants:AT2G36110.1 GeneID:818184
KEGG:ath:AT2G36110 TAIR:At2g36110 InParanoid:Q9SIH3 OMA:FRHQLEI
PhylomeDB:Q9SIH3 ProtClustDB:CLSN2913262 Genevestigator:Q9SIH3
Uniprot:Q9SIH3
Length = 239
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 6 LDIQGNNMKVTVVDHAALIDDNVAALKALLKRQR-----VVGIDVKFNHRCTKKA-EMLI 59
+D G + VTV + I + +++ R R VVG+DV++ + ++L
Sbjct: 19 IDFFGERLIVTVTHTTSTIRRWIHSIR-FFSRLRSSHPLVVGLDVQWTPGGSDPPPDILQ 77
Query: 60 LCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGI---EMNGKVDGLGRCNLRCKTAVE 116
LC GNRCLIIQL H +IPE L+ FL DETI FVG+ + GK++ R L ++
Sbjct: 78 LCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERF-RHQLEIWRLLD 136
Query: 117 LGHFA-ARVLKKPHISSFGLAKLAREVGIHNSLASGFNGYAPSWSARAFSNEQIKFAVHE 175
+ H+ R+L SSF K+ E + + +W AR+ S++QI A +
Sbjct: 137 IRHYLPTRLLN----SSF--EKIVEECLGYKGVRKDKEICMSNWGARSLSHDQIVQASDD 190
Query: 176 AFAYYVIG 183
+ +G
Sbjct: 191 VYVCCKLG 198
>TAIR|locus:2092497 [details] [associations]
symbol:AT3G12420 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR012337 EMBL:CP002686
GO:GO:0003676 GO:GO:0004527 SUPFAM:SSF53098 IPI:IPI01020114
RefSeq:NP_187848.2 UniGene:At.74525 ProteinModelPortal:F4J9R7
EnsemblPlants:AT3G12420.1 GeneID:820421 KEGG:ath:AT3G12420
Uniprot:F4J9R7
Length = 185
Score = 135 (52.6 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDGLGRCNLRCKTA 114
A+ L LC GN+CLIIQLCH Q+P SL+ FL D FVG+ N + D G+ R K
Sbjct: 110 ADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGV-WNSQ-DA-GKL-ARSKHQ 165
Query: 115 VELG 118
+E+G
Sbjct: 166 LEIG 169
Score = 50 (22.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 3 KYELDIQGNNMKVTVVDHAALI 24
+Y +D+ GN + VTV A+I
Sbjct: 16 EYSIDVFGNTLSVTVTSDFAII 37
>TAIR|locus:2092482 [details] [associations]
symbol:AT3G12410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 ProtClustDB:CLSN2683821
EMBL:AK176143 IPI:IPI00544772 RefSeq:NP_187847.1 UniGene:At.50891
ProteinModelPortal:Q9LHG7 PRIDE:Q9LHG7 EnsemblPlants:AT3G12410.1
GeneID:820420 KEGG:ath:AT3G12410 TAIR:At3g12410 eggNOG:NOG253679
InParanoid:Q9LHG7 OMA:YNTHLEY PhylomeDB:Q9LHG7
Genevestigator:Q9LHG7 Uniprot:Q9LHG7
Length = 230
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDG-LGRC 107
A++L LC GNRCLIIQL + Q+P +L+ FLAD FVG+ NG+ G L RC
Sbjct: 93 ADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFVGV-WNGQDAGKLARC 145
>TAIR|locus:2092457 [details] [associations]
symbol:AT3G12460 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 eggNOG:KOG4373 HOGENOM:HOG000152188
ProtClustDB:CLSN2683821 IPI:IPI00526836 RefSeq:NP_187852.1
UniGene:At.50599 ProteinModelPortal:Q9LHG2 DNASU:820425
EnsemblPlants:AT3G12460.1 GeneID:820425 KEGG:ath:AT3G12460
TAIR:At3g12460 InParanoid:Q9LHG2 PhylomeDB:Q9LHG2
Genevestigator:Q9LHG2 Uniprot:Q9LHG2
Length = 242
Score = 122 (48.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 55 AEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGI---EMNGKVDGLGRCNLRC 111
A+ L LC GNRC+IIQL + ++P+ L+ FLAD FVGI + GK++ R L
Sbjct: 101 ADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFVGIWNSQDAGKLER-SRHQLEI 159
Query: 112 KTAVELGHFAARVLKKPHISSFGLAKLARE 141
++L F + + + ++ L K+ E
Sbjct: 160 AELMDLREFVSDSSGRRSMYNYSLEKIVEE 189
Score = 38 (18.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 3 KYELDIQGNNMKVTVVDHAALIDD---NVAALKALLKRQRVVGIDVKF 47
+Y +D G + VTV ++I +V L VVG+ V++
Sbjct: 16 RYSVDFFGEELFVTVTPDPSVIGQWIHDVFFHNRLSSHPLVVGVGVQW 63
>TAIR|locus:2092507 [details] [associations]
symbol:AT3G12430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 SMART:SM00474
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AC069474 IPI:IPI00535476
RefSeq:NP_187849.1 UniGene:At.65082 ProteinModelPortal:Q9C7A5
EnsemblPlants:AT3G12430.1 GeneID:820422 KEGG:ath:AT3G12430
TAIR:At3g12430 eggNOG:KOG4373 HOGENOM:HOG000152188
InParanoid:Q9C7A5 OMA:IIIQLSH PhylomeDB:Q9C7A5
ProtClustDB:CLSN2683821 Genevestigator:Q9C7A5 Uniprot:Q9C7A5
Length = 238
Score = 124 (48.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 46 KFNHRCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDGLG 105
+ R A+ L LC GNRC+IIQL H ++P+ L+ FLAD FVGI + L
Sbjct: 92 RVRRRFDPPADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVGIWNSQDAGKLK 151
Query: 106 RCNLRCKTAVEL 117
R + AV L
Sbjct: 152 RSKHELEIAVLL 163
>TAIR|locus:2092472 [details] [associations]
symbol:AT3G12470 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
GO:GO:0004527 SUPFAM:SSF53098 EMBL:AP002047 EMBL:AC069474
EMBL:BT025648 IPI:IPI00521942 RefSeq:NP_566424.1 UniGene:At.39591
ProteinModelPortal:Q9LHG1 SMR:Q9LHG1 IntAct:Q9LHG1
EnsemblPlants:AT3G12470.1 GeneID:820426 KEGG:ath:AT3G12470
TAIR:At3g12470 InParanoid:Q9LHG1 OMA:GSRCLII PhylomeDB:Q9LHG1
ProtClustDB:CLSN2914969 Genevestigator:Q9LHG1 Uniprot:Q9LHG1
Length = 220
Score = 121 (47.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 3 KYELDIQGNNMKVTVVDHAALIDDNVAALKALLKRQRV----VGIDVKFNHRCTKK---A 55
K+ +D G+++ VTV A++I + ++++ + V VGI V++ +
Sbjct: 16 KHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSDPDPPP 75
Query: 56 EMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDGLGRCNLRCKTAV 115
+ L LC G+RCLIIQL + +P+ L+ FLAD FVG+ NG+ + +C+ V
Sbjct: 76 KTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGV-WNGQDQ---KKLEKCRHRV 131
Query: 116 ELG 118
E+G
Sbjct: 132 EIG 134
>TAIR|locus:2092442 [details] [associations]
symbol:AT3G12440 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 IPI:IPI00533131
RefSeq:NP_187850.1 UniGene:At.65083 ProteinModelPortal:Q9LHG4
SMR:Q9LHG4 EnsemblPlants:AT3G12440.1 GeneID:820423
KEGG:ath:AT3G12440 TAIR:At3g12440 eggNOG:NOG282953
InParanoid:Q9LHG4 PhylomeDB:Q9LHG4 Genevestigator:Q9LHG4
Uniprot:Q9LHG4
Length = 353
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 50 RCTKKAEMLILCAGNRCLIIQLCHLGQIPESLKKFLADETICFVGIEMNGKVDGLGRCNL 109
R A L LC GNRC+IIQL + ++P L++FL D FVG + L R
Sbjct: 211 RSDPPANTLQLCVGNRCIIIQLFYCNRVPHVLRRFLGDRNHTFVGFWNSQDAGKLKRSRH 270
Query: 110 RCKTA 114
R + A
Sbjct: 271 RLEIA 275
Score = 53 (23.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 2 GKYELDIQGNNMKVTVVDHAALIDDNVAALKALLKRQRVVGIDVKF 47
GK+ +D G+ VTV ++I + + R VVG+ V++
Sbjct: 15 GKFSVDFFGDEFIVTVTSDPSVIGQWIHDVLRFSSRPLVVGVGVQW 60
>TAIR|locus:2095994 [details] [associations]
symbol:AT3G62320 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL162507 eggNOG:KOG4373 ProtClustDB:CLSN2684128
IPI:IPI00528255 PIR:T48024 RefSeq:NP_191791.1 UniGene:At.50306
ProteinModelPortal:Q9LZQ8 DNASU:825405 EnsemblPlants:AT3G62320.1
GeneID:825405 KEGG:ath:AT3G62320 TAIR:At3g62320
HOGENOM:HOG000153039 OMA:CNKENAN PhylomeDB:Q9LZQ8
Genevestigator:Q9LZQ8 Uniprot:Q9LZQ8
Length = 171
Score = 105 (42.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 2 GKYELDIQGNNMKVTVVDHAALID-DNVAALKALLKRQRVVGIDVKFNHRCTKKAEMLIL 60
G+ + + N+ +T L + +N + L + VVG D ++ K +L L
Sbjct: 12 GRIRVTVARNDRDITSEVRTFLCNKENANKIIGLDTERSVVGGDSEYPPE--SKLVILEL 69
Query: 61 CAGNRCLIIQLCHL--GQIPESLKKFLADETICFVGIEMNGKVDGL-GRCNLRCKTAVEL 117
G CLII L ++ ++P SL FL F G+ +N + L C L CK AV++
Sbjct: 70 SDGQNCLIIPLPYVQGNKLPVSLTNFLNLPDFTFTGVGINKALKMLKSECGLTCKNAVDI 129
Query: 118 G 118
G
Sbjct: 130 G 130
Score = 39 (18.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 159 WSARAFSNEQIKFAVHEAFAYYVIGDRVLSSL 190
W + + +QI A A+ + +G+ + ++
Sbjct: 139 WDNDSLTEDQINLAAANAYLAFKVGNLIREAM 170
>UNIPROTKB|F1NAR0 [details] [associations]
symbol:F1NAR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0000403 "Y-form DNA
binding" evidence=IEA] [GO:0000405 "bubble DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0009378 "four-way junction helicase activity"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IEA] [GO:0032066 "nucleolus
to nucleoplasm transport" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 OMA:GIEGDQW EMBL:AADN02016143 IPI:IPI01017120
Ensembl:ENSGALT00000016720 Uniprot:F1NAR0
Length = 1367
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 31 LKALLKRQRVVGIDVKFNHRCTK----KAEMLILCAGN-RCLIIQLCHLGQIPESLKKFL 85
++ L VG D+++ TK K ++ LC +C + + + P+ LK+ L
Sbjct: 34 IRQTLSDGAAVGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLL 93
Query: 86 ADETICFVGIEMNGKVDGL-GRCNLRCKTAVELGHFAARVLKKPHISSF-GLAK--LARE 141
DETI VG+ + G L G ++ K+ VEL A LK + S GL K ++
Sbjct: 94 EDETIKKVGVGIEGDHWKLMGDFEVKLKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQ 153
Query: 142 VGIHNSLASGFNGYAPSWSARAFSNEQIKFAVHEAFAYYVIGDRV--LSSLD 191
+ S+ G +W EQ +A +A+A ++I ++ ++S+D
Sbjct: 154 LLKDKSIRCG------NWEKFPLDEEQKLYAATDAYAGFIIYQKLKTMNSID 199
>ZFIN|ZDB-GENE-070702-2 [details] [associations]
symbol:wrn "Werner syndrome" species:7955 "Danio
rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
Length = 1436
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 44/160 (27%), Positives = 72/160 (45%)
Query: 31 LKALLKRQRVVGIDVK----FNHRCTKKAEMLILCAG-NRCLIIQLCHLGQIPESLKKFL 85
L++ L VG D++ F TKK M+ LCA ++C + + + P LK FL
Sbjct: 57 LRSALSSGSAVGFDLEWPPSFTKGKTKKVAMVQLCASEDKCYLFHISSMSGFPPGLKMFL 116
Query: 86 ADETICFVGIEMNG-KVDGLGRCNLRCKTAVELGHFAARVLKKPHISSF-GLAK-LAREV 142
DE I VG+ + G K L +++ K V+L A L+ S GL K L ++
Sbjct: 117 EDENIMKVGVGIEGDKWKLLSDYDIKLKNIVDLSDLANEKLRCCEKWSLDGLVKHLLKKQ 176
Query: 143 GIHNSLASGFNGYAPSWSARAFSNEQIKFAVHEAFAYYVI 182
+ L W + + +Q ++A +A+A +I
Sbjct: 177 LFKDKLVR-----CSHWDDFSLTEDQKRYAATDAYAGLLI 211
>TAIR|locus:2156243 [details] [associations]
symbol:AT5G48350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
EMBL:CP002688 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AP000372 EMBL:AY735711 IPI:IPI00543542
RefSeq:NP_199646.1 UniGene:At.55429 ProteinModelPortal:Q9LK79
EnsemblPlants:AT5G48350.1 GeneID:834888 KEGG:ath:AT5G48350
TAIR:At5g48350 OMA:EIGPATW PhylomeDB:Q9LK79 ProtClustDB:CLSN2684128
Genevestigator:Q9LK79 Uniprot:Q9LK79
Length = 199
Score = 104 (41.7 bits), Expect = 0.00062, P = 0.00062
Identities = 48/190 (25%), Positives = 77/190 (40%)
Query: 11 NNMKVTVVDHAALIDDNVAA-LKALLKRQRVVGIDVKFNHRCTK--KAEMLILCAGNRCL 67
+++K TV + I+ V L R++++G+D + + K K +L LC G+ CL
Sbjct: 11 DSIKTTVTEKERDINRLVKTFLSNKNNRKKIIGLDTERVQKGRKLNKTVLLQLCDGDNCL 70
Query: 68 IIQLCHLGQ---------IPESLKKFLADETICFVGIEMNGKVDGL-GRCNLRCKTAVEL 117
I+QL + +P L FL FVGI +N + L L CK VE+
Sbjct: 71 IVQLPDEDEDEGEGEDDNLPLPLFNFLNLPEFTFVGIGINKTMMRLESEFGLTCKNVVEI 130
Query: 118 GHFAARVLKKPHISSFGLAKLAREVGIHNSLASGFNGYAPSWSARAFSNEQIKFAVHEAF 177
G + F ++ + S N W + QIK A A+
Sbjct: 131 GPATWNLTNMTTDVKFRISAIV-------STERPSNAVLEDWEKFVLNKNQIKLAASNAY 183
Query: 178 AYYVIGDRVL 187
+ IG+ +L
Sbjct: 184 FAFGIGNILL 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 192 192 0.00096 110 3 11 22 0.39 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 589 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.40u 0.16s 15.56t Elapsed: 00:00:01
Total cpu time: 15.41u 0.16s 15.57t Elapsed: 00:00:01
Start: Fri May 10 23:22:00 2013 End: Fri May 10 23:22:01 2013