Query 043932
Match_columns 1017
No_of_seqs 1124 out of 6532
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:43:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.1E-83 3.8E-88 799.4 43.8 603 28-642 4-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.2E-65 7.5E-70 635.2 30.9 518 77-605 126-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.4E-61 4.9E-66 596.2 40.1 563 65-631 4-627 (680)
4 4eco_A Uncharacterized protein 100.0 5.3E-60 1.8E-64 573.2 26.0 514 31-630 25-630 (636)
5 1ziw_A TOLL-like receptor 3; i 100.0 9.8E-58 3.4E-62 562.0 40.4 524 77-608 49-627 (680)
6 3t6q_A CD180 antigen; protein- 100.0 5.9E-58 2E-62 556.4 35.9 526 67-607 14-564 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 3.2E-58 1.1E-62 564.6 30.8 503 30-603 263-864 (876)
8 3vq2_A TLR4, TOLL-like recepto 100.0 8.8E-58 3E-62 554.8 33.2 512 77-631 32-563 (606)
9 3t6q_A CD180 antigen; protein- 100.0 1.3E-57 4.6E-62 553.2 33.5 533 81-631 16-565 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 1E-56 3.5E-61 563.2 36.7 520 65-630 14-564 (844)
11 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-55 5.1E-60 552.7 38.7 508 81-626 8-539 (844)
12 2z81_A CD282 antigen, TOLL-lik 100.0 2.7E-53 9.1E-58 509.2 31.2 495 64-608 3-515 (549)
13 3vq2_A TLR4, TOLL-like recepto 100.0 1E-52 3.5E-57 510.3 31.3 492 76-609 55-564 (606)
14 2z63_A TOLL-like receptor 4, v 100.0 5.3E-52 1.8E-56 500.6 30.2 492 78-610 29-538 (570)
15 3omv_A RAF proto-oncogene seri 100.0 1.1E-51 3.7E-56 446.0 17.3 264 703-1012 34-302 (307)
16 2z63_A TOLL-like receptor 4, v 100.0 2.6E-50 8.9E-55 485.8 31.3 513 82-631 12-536 (570)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-51 4.3E-56 446.0 14.3 264 705-1010 13-289 (299)
18 4fih_A Serine/threonine-protei 100.0 4.9E-51 1.7E-55 446.0 18.5 251 705-1004 74-324 (346)
19 4aoj_A High affinity nerve gro 100.0 4.4E-51 1.5E-55 448.2 17.9 265 705-1011 41-320 (329)
20 4b9d_A Serine/threonine-protei 100.0 7.9E-51 2.7E-55 445.1 16.8 253 704-1004 23-277 (350)
21 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-50 4.6E-55 441.4 18.5 261 703-1011 56-317 (336)
22 2z81_A CD282 antigen, TOLL-lik 100.0 1E-49 3.4E-54 478.1 27.2 489 57-583 5-514 (549)
23 3fpq_A Serine/threonine-protei 100.0 2.7E-50 9.3E-55 431.9 19.8 251 707-1004 28-283 (290)
24 4gt4_A Tyrosine-protein kinase 100.0 1.4E-50 4.7E-55 439.9 17.1 263 705-1009 26-305 (308)
25 4g8a_A TOLL-like receptor 4; l 100.0 5.6E-49 1.9E-53 480.9 33.1 516 102-631 53-585 (635)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.9E-51 3.1E-55 437.1 14.9 252 704-1004 31-285 (311)
27 2z7x_B TOLL-like receptor 1, v 100.0 2.6E-49 9.1E-54 470.8 27.4 465 80-630 3-485 (520)
28 4eco_A Uncharacterized protein 100.0 4.9E-50 1.7E-54 485.9 20.5 495 32-629 23-603 (636)
29 4fie_A Serine/threonine-protei 100.0 7.2E-50 2.5E-54 447.6 19.3 251 705-1004 151-401 (423)
30 3hyh_A Carbon catabolite-derep 100.0 1.8E-49 6E-54 421.6 18.5 248 704-1004 12-263 (275)
31 4ecn_A Leucine-rich repeat pro 100.0 1.8E-48 6.3E-53 478.1 29.3 461 101-630 323-870 (876)
32 4ase_A Vascular endothelial gr 100.0 2.8E-49 9.5E-54 437.2 14.8 275 697-1011 56-348 (353)
33 3hmm_A TGF-beta receptor type- 100.0 1.7E-48 5.9E-53 425.1 20.2 275 705-1011 3-298 (303)
34 4g31_A Eukaryotic translation 100.0 2.1E-48 7.3E-53 421.8 19.1 265 704-1004 4-280 (299)
35 3ubd_A Ribosomal protein S6 ki 100.0 6.3E-49 2.2E-53 423.2 11.6 249 705-1004 24-282 (304)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.8E-46 1.6E-50 446.3 32.6 465 80-630 34-514 (562)
37 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-46 3.8E-51 448.1 21.9 437 77-607 21-485 (520)
38 4b99_A Mitogen-activated prote 100.0 1E-46 3.5E-51 424.3 18.6 286 704-1004 53-345 (398)
39 4f9c_A Cell division cycle 7-r 100.0 8.8E-46 3E-50 412.6 17.1 286 700-1004 16-353 (361)
40 1ogq_A PGIP-2, polygalacturona 100.0 5.7E-45 1.9E-49 401.8 19.1 293 32-329 2-302 (313)
41 3v5w_A G-protein coupled recep 100.0 2.7E-44 9.3E-49 419.6 19.6 251 704-1004 188-450 (689)
42 4g8a_A TOLL-like receptor 4; l 100.0 4.7E-43 1.6E-47 428.5 31.3 528 64-608 26-585 (635)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.1E-43 7.3E-48 423.4 24.3 439 77-608 52-515 (562)
44 3uto_A Twitchin; kinase, muscl 100.0 3.6E-44 1.2E-48 424.2 17.2 254 704-1004 156-411 (573)
45 3v47_A TOLL-like receptor 5B a 100.0 1.9E-42 6.6E-47 404.6 28.2 397 104-609 13-414 (455)
46 1jl5_A Outer protein YOPM; leu 100.0 7.3E-43 2.5E-47 404.1 23.0 422 95-627 5-430 (454)
47 3v47_A TOLL-like receptor 5B a 100.0 1.2E-41 4E-46 397.9 25.9 396 63-583 6-412 (455)
48 1jl5_A Outer protein YOPM; leu 100.0 4.5E-42 1.6E-46 397.5 21.3 399 123-627 9-410 (454)
49 3fxz_A Serine/threonine-protei 100.0 8.2E-42 2.8E-46 374.1 20.9 253 704-1005 19-271 (297)
50 2qkw_B Protein kinase; three-h 100.0 8.3E-42 2.8E-46 379.2 18.5 285 695-1010 29-315 (321)
51 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-41 4.5E-46 375.6 19.7 268 704-1014 9-286 (310)
52 3uim_A Brassinosteroid insensi 100.0 1.7E-41 5.7E-46 377.8 18.7 290 690-1008 15-309 (326)
53 3fe3_A MAP/microtubule affinit 100.0 1.5E-41 5.1E-46 376.4 17.5 252 701-1004 11-265 (328)
54 3ugc_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46 373.2 15.2 283 704-1014 9-295 (295)
55 3zgw_A Maternal embryonic leuc 100.0 2E-41 6.8E-46 377.3 16.2 255 702-1006 7-263 (347)
56 3soc_A Activin receptor type-2 100.0 3.3E-41 1.1E-45 374.1 16.8 288 701-1011 20-319 (322)
57 2yab_A Death-associated protei 100.0 8.6E-41 2.9E-45 374.6 19.9 255 703-1005 10-274 (361)
58 1tki_A Titin; serine kinase, m 100.0 6.6E-41 2.3E-45 370.7 18.1 255 704-1006 4-260 (321)
59 2nru_A Interleukin-1 receptor- 100.0 4.7E-40 1.6E-44 362.8 24.8 285 691-1011 11-307 (307)
60 2c30_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45 367.4 21.7 266 693-1007 23-298 (321)
61 3p86_A Serine/threonine-protei 100.0 3.8E-41 1.3E-45 370.7 15.9 269 697-1013 29-301 (309)
62 3kul_A Ephrin type-A receptor 100.0 4.5E-41 1.5E-45 373.2 15.8 267 704-1016 48-319 (325)
63 3q4u_A Activin receptor type-1 100.0 2.4E-40 8.2E-45 364.1 21.5 269 703-1008 6-300 (301)
64 1o6l_A RAC-beta serine/threoni 100.0 1.9E-40 6.5E-45 368.4 20.2 251 704-1005 4-262 (337)
65 2psq_A Fibroblast growth facto 100.0 1.3E-40 4.4E-45 376.0 19.2 266 704-1011 80-365 (370)
66 4eqm_A Protein kinase; transfe 100.0 7.7E-41 2.6E-45 366.0 16.8 263 704-1011 10-276 (294)
67 3lb7_A RAF proto-oncogene seri 100.0 1.6E-40 5.6E-45 365.5 19.1 264 703-1012 34-302 (307)
68 4euu_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 368.5 18.6 282 704-1009 8-308 (319)
69 3tki_A Serine/threonine-protei 100.0 1.2E-40 4.3E-45 369.1 17.3 257 704-1006 6-264 (323)
70 2y0a_A Death-associated protei 100.0 2.8E-40 9.6E-45 366.9 20.1 254 704-1005 10-273 (326)
71 3soa_A Calcium/calmodulin-depe 100.0 3.1E-40 1.1E-44 379.8 20.0 256 702-1004 8-268 (444)
72 4hcu_A Tyrosine-protein kinase 100.0 2.6E-40 8.8E-45 357.3 17.6 258 704-1011 9-267 (269)
73 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.6E-40 1.2E-44 356.0 18.7 259 703-1011 6-265 (268)
74 2bdw_A Hypothetical protein K1 100.0 2.7E-40 9.2E-45 371.9 17.6 255 702-1004 26-285 (362)
75 3vhe_A Vascular endothelial gr 100.0 1.9E-40 6.4E-45 374.8 16.4 277 695-1011 12-356 (359)
76 3niz_A Rhodanese family protei 100.0 5.6E-40 1.9E-44 362.1 19.6 279 702-1004 18-301 (311)
77 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-40 3.8E-45 378.0 14.2 264 702-1012 111-376 (377)
78 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-39 5.8E-44 376.2 24.4 358 94-608 35-392 (457)
79 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.5E-40 5.2E-45 371.7 14.8 251 703-1004 21-281 (353)
80 2izr_A Casein kinase I isoform 100.0 8.2E-40 2.8E-44 364.5 20.6 269 704-1011 8-282 (330)
81 4dc2_A Protein kinase C IOTA t 100.0 3E-40 1E-44 373.2 17.1 255 704-1004 51-319 (396)
82 3op5_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 373.0 17.1 281 703-1012 33-331 (364)
83 3c0i_A Peripheral plasma membr 100.0 3.1E-40 1.1E-44 370.4 16.8 257 704-1004 23-287 (351)
84 4fr4_A YANK1, serine/threonine 100.0 1E-39 3.5E-44 367.6 20.9 252 704-1004 14-272 (384)
85 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-40 6.3E-45 368.0 14.3 249 704-1005 8-260 (336)
86 1csn_A Casein kinase-1; phosph 100.0 1.5E-39 5.2E-44 357.2 21.4 271 704-1012 9-285 (298)
87 3g33_A Cell division protein k 100.0 4.4E-40 1.5E-44 363.1 17.1 283 703-1004 7-297 (308)
88 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-40 1.1E-44 365.1 16.1 283 704-1004 4-294 (317)
89 3ttj_A Mitogen-activated prote 100.0 8.6E-40 3E-44 379.5 20.2 280 703-1005 60-357 (464)
90 4f0f_A Serine/threonine-protei 100.0 9.6E-40 3.3E-44 356.5 19.0 254 704-1008 18-287 (287)
91 1kob_A Twitchin; kinase, intra 100.0 4.9E-40 1.7E-44 371.8 17.0 254 704-1004 50-305 (387)
92 1fot_A TPK1 delta, CAMP-depend 100.0 1.3E-39 4.4E-44 359.1 19.8 247 704-1004 5-259 (318)
93 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-40 7.2E-45 374.0 13.6 266 704-1011 70-346 (367)
94 2qol_A Ephrin receptor; recept 100.0 3.1E-40 1E-44 373.1 14.9 263 704-1012 44-311 (373)
95 3gni_B Strad alpha; kinase fol 100.0 1.2E-39 4E-44 372.0 19.7 288 703-1004 23-334 (389)
96 3qd2_B Eukaryotic translation 100.0 1.4E-39 4.7E-44 363.5 19.9 267 702-1004 3-326 (332)
97 1xjd_A Protein kinase C, theta 100.0 4.4E-40 1.5E-44 366.4 15.6 252 702-1004 14-270 (345)
98 3o0g_A Cell division protein k 100.0 4.2E-40 1.4E-44 360.2 15.1 278 705-1004 2-283 (292)
99 3rp9_A Mitogen-activated prote 100.0 8E-40 2.7E-44 381.7 18.4 291 704-1004 52-397 (458)
100 2w4o_A Calcium/calmodulin-depe 100.0 5.4E-40 1.8E-44 368.0 16.3 253 703-1004 51-306 (349)
101 3g2f_A Bone morphogenetic prot 100.0 2.7E-40 9.2E-45 369.8 13.8 296 704-1016 12-324 (336)
102 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 358.1 18.3 253 704-1004 12-293 (298)
103 3ork_A Serine/threonine protei 100.0 2.2E-40 7.4E-45 365.9 12.8 265 703-1007 10-278 (311)
104 3uc3_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 366.1 19.7 256 703-1005 18-276 (361)
105 3qup_A Tyrosine-protein kinase 100.0 2.4E-40 8E-45 368.0 13.1 276 700-1012 18-300 (323)
106 1luf_A Muscle-specific tyrosin 100.0 3.1E-40 1.1E-44 370.5 14.1 275 699-1015 41-340 (343)
107 4aw2_A Serine/threonine-protei 100.0 1.6E-40 5.6E-45 380.4 12.0 265 697-1005 66-340 (437)
108 3a8x_A Protein kinase C IOTA t 100.0 1.1E-39 3.6E-44 364.2 18.0 255 704-1004 8-276 (345)
109 3gen_A Tyrosine-protein kinase 100.0 6.9E-40 2.3E-44 356.9 15.9 262 700-1011 19-281 (283)
110 3v8s_A RHO-associated protein 100.0 5.6E-40 1.9E-44 373.2 15.5 262 698-1006 62-332 (410)
111 3f3z_A Calcium/calmodulin-depe 100.0 1.9E-39 6.4E-44 352.3 19.0 253 703-1004 7-262 (277)
112 2x4f_A Myosin light chain kina 100.0 9.4E-40 3.2E-44 368.8 17.1 250 708-1004 92-343 (373)
113 3poz_A Epidermal growth factor 100.0 8E-40 2.7E-44 363.8 16.1 259 704-1010 14-278 (327)
114 4fvq_A Tyrosine-protein kinase 100.0 4.6E-40 1.6E-44 359.5 13.8 257 704-1014 7-279 (289)
115 3brb_A Proto-oncogene tyrosine 100.0 7.7E-40 2.6E-44 362.1 15.7 278 698-1012 27-310 (313)
116 3bz5_A Internalin-J, INLJ; leu 100.0 8E-39 2.7E-43 370.6 24.8 358 111-624 28-385 (457)
117 3n9x_A Phosphotransferase; mal 100.0 1.7E-39 5.8E-44 374.9 19.0 291 704-1004 25-362 (432)
118 3oz6_A Mitogen-activated prote 100.0 1.1E-39 3.6E-44 372.1 16.9 288 702-1004 6-329 (388)
119 1ob3_A PFPK5, cell division co 100.0 5.8E-40 2E-44 358.2 14.1 276 705-1004 2-281 (288)
120 3og7_A AKAP9-BRAF fusion prote 100.0 9.7E-40 3.3E-44 356.7 15.7 263 702-1010 21-288 (289)
121 2i0e_A Protein kinase C-beta I 100.0 1.8E-39 6.2E-44 362.7 17.9 250 704-1004 19-277 (353)
122 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.3E-39 7.9E-44 362.0 18.4 248 704-1005 40-295 (350)
123 3qyz_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 364.6 19.8 289 699-1005 21-315 (364)
124 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-39 7.3E-44 358.9 17.8 268 702-1011 20-312 (314)
125 4eut_A Serine/threonine-protei 100.0 8E-40 2.7E-44 373.6 14.7 285 704-1011 8-310 (396)
126 2a2a_A Death-associated protei 100.0 3.6E-39 1.2E-43 357.8 19.6 255 703-1005 10-274 (321)
127 3lxl_A Tyrosine-protein kinase 100.0 1.6E-39 5.5E-44 361.8 16.6 280 704-1012 22-305 (327)
128 1mp8_A Focal adhesion kinase 1 100.0 5.9E-40 2E-44 356.9 12.7 262 701-1011 11-277 (281)
129 1rjb_A FL cytokine receptor; k 100.0 2.2E-39 7.6E-44 363.6 17.5 274 700-1014 40-338 (344)
130 2ac3_A MAP kinase-interacting 100.0 5.5E-39 1.9E-43 355.8 20.3 277 704-1005 11-297 (316)
131 3uzp_A CKI-delta, CKID, casein 100.0 9.6E-39 3.3E-43 350.4 22.0 271 703-1012 7-282 (296)
132 2vd5_A DMPK protein; serine/th 100.0 1.1E-39 3.7E-44 371.1 14.9 264 697-1005 53-329 (412)
133 3kfa_A Tyrosine-protein kinase 100.0 2.4E-39 8.3E-44 353.6 16.9 265 699-1011 7-272 (288)
134 4hgt_A Casein kinase I isoform 100.0 9.2E-39 3.1E-43 350.5 21.5 271 703-1012 7-282 (296)
135 2eva_A TAK1 kinase - TAB1 chim 100.0 6.7E-39 2.3E-43 353.0 20.4 259 704-1013 7-266 (307)
136 3kex_A Receptor tyrosine-prote 100.0 2.6E-39 8.8E-44 359.5 17.3 259 704-1010 12-276 (325)
137 1cm8_A Phosphorylated MAP kina 100.0 3.1E-39 1.1E-43 364.2 18.1 278 704-1004 24-308 (367)
138 3mdy_A Bone morphogenetic prot 100.0 2.2E-38 7.5E-43 354.6 24.9 281 698-1012 30-333 (337)
139 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-39 9.3E-44 357.9 17.1 272 700-1012 18-309 (313)
140 3hko_A Calcium/calmodulin-depe 100.0 2E-39 6.9E-44 364.1 16.3 269 699-1004 20-331 (345)
141 2v62_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 361.4 18.2 276 704-1011 36-329 (345)
142 3llt_A Serine/threonine kinase 100.0 3.9E-39 1.3E-43 363.9 18.6 287 692-1004 22-356 (360)
143 2buj_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 359.7 15.7 280 703-1014 27-310 (317)
144 4agu_A Cyclin-dependent kinase 100.0 2.4E-39 8.2E-44 357.9 16.4 278 704-1004 2-285 (311)
145 3kmu_A ILK, integrin-linked ki 100.0 3.6E-39 1.2E-43 348.8 17.4 256 704-1011 9-271 (271)
146 3tt0_A Basic fibroblast growth 100.0 7E-39 2.4E-43 364.1 20.5 269 703-1013 67-355 (382)
147 2y94_A 5'-AMP-activated protei 100.0 3.9E-39 1.3E-43 372.9 18.6 249 704-1004 15-267 (476)
148 3kn6_A Ribosomal protein S6 ki 100.0 2.1E-39 7.2E-44 359.6 15.7 255 705-1004 8-271 (325)
149 1o6v_A Internalin A; bacterial 100.0 7.8E-38 2.7E-42 365.7 29.8 344 101-556 46-389 (466)
150 2qr7_A Ribosomal protein S6 ki 100.0 4E-39 1.4E-43 359.1 17.9 256 703-1006 20-280 (342)
151 1o6v_A Internalin A; bacterial 100.0 6.1E-38 2.1E-42 366.6 28.7 347 122-604 43-389 (466)
152 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-39 1.4E-43 355.3 17.8 247 704-1004 56-305 (311)
153 4e5w_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 354.6 17.4 277 704-1009 20-301 (302)
154 2w1i_A JAK2; chromosomal rearr 100.0 2.6E-39 9E-44 359.8 16.2 283 704-1014 40-326 (326)
155 2h34_A Serine/threonine-protei 100.0 8.7E-39 3E-43 352.5 20.1 267 703-1016 32-302 (309)
156 3c1x_A Hepatocyte growth facto 100.0 1.5E-39 5.2E-44 366.8 14.3 267 705-1015 89-360 (373)
157 2yex_A Serine/threonine-protei 100.0 7.8E-39 2.7E-43 347.2 19.4 257 703-1005 5-263 (276)
158 3kk8_A Calcium/calmodulin depe 100.0 4.4E-39 1.5E-43 350.8 17.4 255 703-1005 4-263 (284)
159 3dtc_A Mitogen-activated prote 100.0 3E-39 1E-43 349.4 16.0 251 704-1008 6-271 (271)
160 1t4h_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 349.0 20.2 254 704-1004 25-283 (290)
161 3i6u_A CDS1, serine/threonine- 100.0 4.2E-39 1.4E-43 369.8 18.0 256 702-1005 132-401 (419)
162 1opk_A P150, C-ABL, proto-onco 100.0 5.9E-39 2E-43 376.3 19.3 261 703-1011 218-479 (495)
163 2eue_A Carbon catabolite derep 100.0 4.7E-39 1.6E-43 348.6 17.0 248 704-1004 12-263 (275)
164 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-39 6E-44 361.4 13.9 280 700-1005 29-320 (329)
165 3mtl_A Cell division protein k 100.0 1.1E-39 3.7E-44 362.3 11.9 276 705-1004 2-282 (324)
166 3f66_A Hepatocyte growth facto 100.0 9.9E-39 3.4E-43 350.6 19.4 268 704-1015 24-296 (298)
167 1qcf_A Haematopoetic cell kina 100.0 2.7E-39 9.2E-44 375.8 15.7 264 698-1011 181-445 (454)
168 3t9t_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43 347.0 16.6 258 704-1011 7-265 (267)
169 2wqm_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 353.5 18.4 268 703-1013 30-300 (310)
170 3dls_A PAS domain-containing s 100.0 2.1E-39 7.1E-44 361.0 13.8 245 703-1005 22-276 (335)
171 3fdn_A Serine/threonine-protei 100.0 6E-39 2E-43 348.6 17.1 251 703-1006 7-260 (279)
172 2acx_A G protein-coupled recep 100.0 4.7E-39 1.6E-43 376.3 17.3 253 704-1004 183-445 (576)
173 3a62_A Ribosomal protein S6 ki 100.0 6.9E-39 2.4E-43 355.9 17.8 251 704-1005 16-278 (327)
174 1p4o_A Insulin-like growth fac 100.0 1.9E-39 6.4E-44 360.6 13.1 277 695-1013 15-302 (322)
175 1b6c_B TGF-B superfamily recep 100.0 3E-38 1E-42 354.1 22.9 280 696-1012 33-338 (342)
176 1nxk_A MAP kinase-activated pr 100.0 1.1E-38 3.7E-43 363.7 19.4 257 704-1006 60-324 (400)
177 2xir_A Vascular endothelial gr 100.0 5E-39 1.7E-43 356.2 16.2 277 696-1012 18-312 (316)
178 3pls_A Macrophage-stimulating 100.0 1.3E-38 4.4E-43 349.7 19.3 268 705-1015 21-292 (298)
179 3cc6_A Protein tyrosine kinase 100.0 6.8E-39 2.3E-43 348.6 16.7 260 703-1011 10-274 (281)
180 3lzb_A Epidermal growth factor 100.0 4.6E-39 1.6E-43 357.3 15.6 260 704-1011 14-279 (327)
181 3is5_A Calcium-dependent prote 100.0 7.5E-39 2.6E-43 348.7 16.9 255 704-1004 21-279 (285)
182 4ejn_A RAC-alpha serine/threon 100.0 3.4E-39 1.2E-43 374.6 14.9 251 704-1005 147-406 (446)
183 1k9a_A Carboxyl-terminal SRC k 100.0 9.1E-39 3.1E-43 370.6 18.4 256 703-1012 191-447 (450)
184 1ua2_A CAK, cell division prot 100.0 2.6E-39 9E-44 362.7 13.4 283 701-1006 6-294 (346)
185 2r5t_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 361.3 15.8 246 704-1000 37-286 (373)
186 3gxj_A TGF-beta receptor type- 100.0 2.6E-40 8.9E-45 364.2 4.9 272 704-1012 2-299 (303)
187 1u5q_A Serine/threonine protei 100.0 7E-39 2.4E-43 358.3 16.5 251 704-1007 53-309 (348)
188 3bhy_A Death-associated protei 100.0 1.3E-38 4.5E-43 346.8 18.0 253 704-1004 4-266 (283)
189 3dbq_A Dual specificity protei 100.0 8E-39 2.7E-43 358.3 16.4 255 703-1006 7-276 (343)
190 3cok_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 347.5 15.8 253 703-1005 9-264 (278)
191 4aaa_A Cyclin-dependent kinase 100.0 4.8E-39 1.6E-43 358.5 14.3 279 704-1005 24-308 (331)
192 2fst_X Mitogen-activated prote 100.0 4.9E-39 1.7E-43 362.1 14.4 279 703-1004 27-312 (367)
193 3nsz_A CK II alpha, casein kin 100.0 2.4E-38 8.1E-43 353.1 19.7 274 704-1004 35-320 (330)
194 2zmd_A Dual specificity protei 100.0 1.2E-38 4E-43 362.5 17.3 253 704-1005 55-322 (390)
195 2y7j_A Phosphorylase B kinase 100.0 2.3E-38 7.8E-43 357.1 19.5 259 698-1004 87-360 (365)
196 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.4E-38 4.9E-43 371.9 18.4 258 704-1004 184-449 (543)
197 2jam_A Calcium/calmodulin-depe 100.0 1E-38 3.5E-43 351.4 16.2 254 703-1005 7-263 (304)
198 2pvf_A Fibroblast growth facto 100.0 1E-38 3.6E-43 356.2 16.4 268 703-1012 33-320 (334)
199 3mi9_A Cell division protein k 100.0 2.5E-38 8.6E-43 355.9 19.5 288 704-1005 16-313 (351)
200 1mqb_A Ephrin type-A receptor 100.0 1.3E-38 4.4E-43 354.9 16.9 263 704-1012 43-311 (333)
201 2i1m_A Macrophage colony-stimu 100.0 5E-39 1.7E-43 359.0 13.4 276 699-1015 40-331 (333)
202 3mwu_A Calmodulin-domain prote 100.0 2.2E-38 7.4E-43 372.1 19.0 253 703-1004 20-277 (486)
203 3eb0_A Putative uncharacterize 100.0 7.6E-39 2.6E-43 364.2 14.7 283 701-1004 3-322 (383)
204 3lxp_A Non-receptor tyrosine-p 100.0 6.1E-39 2.1E-43 355.4 13.3 280 704-1014 29-314 (318)
205 2xrw_A Mitogen-activated prote 100.0 2.6E-38 8.8E-43 357.9 18.6 280 704-1005 24-320 (371)
206 1xbb_A Tyrosine-protein kinase 100.0 1.9E-38 6.4E-43 346.9 16.9 264 701-1012 12-281 (291)
207 1u59_A Tyrosine-protein kinase 100.0 3.3E-38 1.1E-42 344.3 18.7 263 704-1013 8-275 (287)
208 2a19_B Interferon-induced, dou 100.0 2E-38 7E-43 345.5 17.0 258 703-1013 9-277 (284)
209 2i6l_A Mitogen-activated prote 100.0 1.9E-38 6.6E-43 352.2 17.1 283 704-1004 10-306 (320)
210 2id5_A Lingo-1, leucine rich r 100.0 7.2E-38 2.5E-42 367.8 22.9 330 271-632 33-362 (477)
211 2clq_A Mitogen-activated prote 100.0 4.5E-38 1.5E-42 344.8 19.7 255 705-1004 22-279 (295)
212 3eqc_A Dual specificity mitoge 100.0 1.6E-38 5.4E-43 358.8 16.5 277 704-1005 32-326 (360)
213 3ll6_A Cyclin G-associated kin 100.0 9.2E-39 3.1E-43 357.6 14.2 274 700-1011 23-309 (337)
214 3lij_A Calcium/calmodulin depe 100.0 2.4E-38 8.1E-43 372.3 18.2 253 703-1004 35-292 (494)
215 2vgo_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 344.0 17.7 248 704-1004 13-263 (284)
216 3lm5_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 354.5 14.5 267 693-1005 16-289 (327)
217 2b9h_A MAP kinase FUS3, mitoge 100.0 2.6E-38 8.9E-43 356.3 17.4 290 703-1004 9-306 (353)
218 2ycf_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 350.5 17.8 254 703-1004 8-275 (322)
219 3sv0_A Casein kinase I-like; t 100.0 9E-38 3.1E-42 362.1 22.3 270 704-1010 6-278 (483)
220 1qpc_A LCK kinase; alpha beta 100.0 2.4E-38 8E-43 344.0 16.4 265 700-1014 8-273 (279)
221 2j7t_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 349.3 15.6 255 703-1004 17-276 (302)
222 3pg1_A Mitogen-activated prote 100.0 3.2E-38 1.1E-42 356.7 18.0 287 697-1004 14-317 (362)
223 2x7f_A TRAF2 and NCK-interacti 100.0 2.3E-38 8E-43 352.5 16.5 269 693-1004 12-287 (326)
224 2rku_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 346.1 16.9 252 703-1005 13-267 (294)
225 2w5a_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 349.8 10.3 263 704-1010 5-274 (279)
226 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.3E-39 2.5E-43 371.7 12.8 263 700-1012 179-442 (452)
227 2r3i_A Cell division protein k 100.0 1.9E-38 6.4E-43 348.6 15.4 278 705-1004 3-284 (299)
228 2jii_A Serine/threonine-protei 100.0 8.8E-39 3E-43 359.5 13.0 273 704-1012 41-338 (352)
229 3q5i_A Protein kinase; CDPK, m 100.0 4.5E-38 1.6E-42 370.8 19.7 254 703-1005 34-303 (504)
230 2owb_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 352.7 16.8 251 703-1004 39-292 (335)
231 3nyv_A Calmodulin-domain prote 100.0 1.4E-38 4.8E-43 373.9 15.1 254 703-1005 24-283 (484)
232 3a7i_A MST3 kinase, serine/thr 100.0 8.3E-38 2.8E-42 344.0 19.7 252 704-1006 21-273 (303)
233 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.3E-38 8E-43 357.9 15.7 264 699-1013 59-342 (365)
234 3byv_A Rhoptry kinase; malaria 100.0 1.7E-39 5.8E-44 368.7 6.4 253 703-1004 71-360 (377)
235 3com_A Serine/threonine-protei 100.0 8E-38 2.8E-42 346.1 19.5 253 703-1004 27-279 (314)
236 3kvw_A DYRK2, dual specificity 100.0 4.1E-38 1.4E-42 362.5 17.7 201 703-928 95-303 (429)
237 2yfx_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 350.5 16.9 267 703-1011 28-305 (327)
238 1fvr_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 350.5 16.7 262 705-1011 25-301 (327)
239 2h6d_A 5'-AMP-activated protei 100.0 5.8E-38 2E-42 340.3 17.4 249 704-1004 10-262 (276)
240 4exu_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 355.4 17.4 278 703-1004 40-324 (371)
241 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-38 7.9E-43 355.8 14.0 258 704-1007 53-325 (355)
242 3e3p_A Protein kinase, putativ 100.0 7.5E-38 2.6E-42 353.6 17.5 290 698-1004 16-315 (360)
243 1x8b_A WEE1HU, WEE1-like prote 100.0 4E-38 1.4E-42 344.1 14.5 250 703-1005 9-281 (289)
244 1phk_A Phosphorylase kinase; g 100.0 8.8E-38 3E-42 343.1 17.2 254 703-1004 15-284 (298)
245 1byg_A CSK, protein (C-termina 100.0 5.8E-38 2E-42 340.7 15.5 256 703-1012 19-275 (278)
246 1j1b_A Glycogen synthase kinas 100.0 7.3E-38 2.5E-42 359.6 17.0 281 704-1005 53-338 (420)
247 1z57_A Dual specificity protei 100.0 2E-37 6.7E-42 347.1 20.0 281 704-1010 13-337 (339)
248 2ozo_A Tyrosine-protein kinase 100.0 5.5E-38 1.9E-42 376.7 16.3 261 705-1012 335-600 (613)
249 2wtk_C Serine/threonine-protei 100.0 1.2E-37 4.3E-42 343.1 17.8 257 703-1005 3-265 (305)
250 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-37 3.6E-42 377.6 18.3 251 703-1004 339-598 (674)
251 2vwi_A Serine/threonine-protei 100.0 1.8E-38 6.3E-43 349.4 10.6 273 702-1004 12-288 (303)
252 4e7w_A Glycogen synthase kinas 100.0 4.1E-38 1.4E-42 358.7 13.4 279 704-1004 39-322 (394)
253 3fme_A Dual specificity mitoge 100.0 7.7E-38 2.6E-42 342.1 15.0 257 703-1004 5-267 (290)
254 1u46_A ACK-1, activated CDC42 100.0 1E-37 3.5E-42 341.2 15.9 264 704-1013 17-287 (291)
255 4fl3_A Tyrosine-protein kinase 100.0 5.3E-38 1.8E-42 377.5 14.5 254 711-1012 375-633 (635)
256 1zy4_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 342.8 16.1 267 703-1005 4-285 (303)
257 1blx_A Cyclin-dependent kinase 100.0 1.1E-37 3.8E-42 347.0 15.9 283 702-1004 8-297 (326)
258 2h8h_A Proto-oncogene tyrosine 100.0 2.8E-38 9.7E-43 374.0 11.6 264 699-1012 261-525 (535)
259 3rgf_A Cyclin-dependent kinase 100.0 8.4E-38 2.9E-42 358.4 14.5 289 704-1006 19-336 (405)
260 3q60_A ROP5B; pseudokinase, tr 100.0 3.2E-38 1.1E-42 357.5 10.9 261 704-1004 61-353 (371)
261 3an0_A Dual specificity mitoge 100.0 2.2E-37 7.6E-42 346.6 17.0 258 702-1004 48-311 (340)
262 1wak_A Serine/threonine-protei 100.0 2.5E-37 8.4E-42 354.5 17.6 279 704-1004 36-392 (397)
263 3coi_A Mitogen-activated prote 100.0 1.9E-37 6.6E-42 348.8 15.0 277 704-1004 23-306 (353)
264 2wei_A Calmodulin-domain prote 100.0 3E-37 1E-41 336.6 16.0 254 702-1004 19-277 (287)
265 3oja_B Anopheles plasmodium-re 100.0 1.1E-36 3.9E-41 366.8 22.6 174 53-258 7-184 (597)
266 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-37 4.4E-42 345.4 12.9 269 697-1012 25-304 (319)
267 2vx3_A Dual specificity tyrosi 100.0 5.7E-37 1.9E-41 348.6 18.4 206 700-928 49-262 (382)
268 3cek_A Dual specificity protei 100.0 2.7E-37 9.2E-42 341.6 14.7 263 694-1005 17-294 (313)
269 2id5_A Lingo-1, leucine rich r 100.0 4.3E-36 1.5E-40 352.7 25.3 180 101-281 32-211 (477)
270 3o6n_A APL1; leucine-rich repe 100.0 3.9E-36 1.3E-40 343.1 23.7 175 55-234 3-178 (390)
271 2pml_X PFPK7, Ser/Thr protein 100.0 3.6E-37 1.2E-41 346.2 14.2 266 704-1004 30-323 (348)
272 3fhr_A MAP kinase-activated pr 100.0 6.1E-37 2.1E-41 341.6 15.6 261 703-1006 26-290 (336)
273 2j0j_A Focal adhesion kinase 1 100.0 5.1E-37 1.7E-41 370.4 16.1 265 698-1011 383-652 (656)
274 3a99_A Proto-oncogene serine/t 100.0 1.9E-37 6.5E-42 343.5 10.2 245 701-1004 39-294 (320)
275 2eu9_A Dual specificity protei 100.0 2.6E-36 9E-41 340.3 19.1 274 704-1004 18-334 (355)
276 2iwi_A Serine/threonine-protei 100.0 3.4E-37 1.1E-41 340.7 10.9 248 699-1005 25-285 (312)
277 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-36 8.9E-41 332.6 17.5 256 374-631 51-309 (313)
278 1q8y_A SR protein kinase; tran 100.0 2.7E-36 9.3E-41 342.6 17.6 280 704-1005 18-335 (373)
279 2dyl_A Dual specificity mitoge 100.0 3E-36 1E-40 334.2 16.1 255 702-1004 22-284 (318)
280 3aln_A Dual specificity mitoge 100.0 1.2E-36 4.1E-41 338.7 12.3 260 704-1004 21-286 (327)
281 4fcg_A Uncharacterized protein 100.0 3.2E-36 1.1E-40 333.8 14.7 269 31-305 22-312 (328)
282 2rio_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 346.9 15.7 259 705-1004 15-296 (434)
283 3o6n_A APL1; leucine-rich repe 100.0 3E-35 1E-39 335.8 21.1 114 512-631 266-379 (390)
284 3qa8_A MGC80376 protein; kinas 100.0 4.6E-36 1.6E-40 353.9 13.4 277 704-1001 13-295 (676)
285 3uqc_A Probable conserved tran 100.0 1.6E-35 5.5E-40 321.5 15.8 235 704-1012 30-267 (286)
286 3p23_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 337.9 16.5 253 703-1004 22-284 (432)
287 3dzo_A Rhoptry kinase domain; 100.0 1.8E-35 6.2E-40 338.9 10.2 253 703-1004 76-364 (413)
288 2pzi_A Probable serine/threoni 100.0 8.1E-35 2.8E-39 355.3 15.3 246 704-1009 79-327 (681)
289 3m2w_A MAP kinase-activated pr 100.0 3.4E-34 1.2E-38 314.3 17.2 239 704-1006 16-259 (299)
290 4fmz_A Internalin; leucine ric 100.0 2.5E-33 8.6E-38 314.7 24.3 214 99-330 42-255 (347)
291 3oja_B Anopheles plasmodium-re 100.0 1E-33 3.4E-38 341.1 22.1 336 245-632 51-386 (597)
292 4fmz_A Internalin; leucine ric 100.0 5E-33 1.7E-37 312.3 26.3 308 216-603 39-346 (347)
293 2vuw_A Serine/threonine-protei 100.0 6.3E-35 2.1E-39 325.9 8.9 249 704-1004 19-332 (336)
294 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-35 5E-40 346.9 -0.7 362 197-580 3-412 (461)
295 2ft3_A Biglycan; proteoglycan, 100.0 3.8E-32 1.3E-36 302.7 24.2 288 246-601 34-331 (332)
296 2ft3_A Biglycan; proteoglycan, 100.0 3.3E-32 1.1E-36 303.2 23.1 218 102-330 34-253 (332)
297 1z7x_W Ribonuclease inhibitor; 100.0 8.4E-36 2.9E-40 349.0 -7.7 336 122-459 25-412 (461)
298 1xku_A Decorin; proteoglycan, 100.0 6.3E-32 2.1E-36 300.8 23.3 199 101-330 52-252 (330)
299 1xku_A Decorin; proteoglycan, 100.0 1E-31 3.5E-36 299.0 22.8 289 246-601 32-330 (330)
300 2z80_A TOLL-like receptor 2, v 100.0 9.7E-31 3.3E-35 294.0 17.1 288 57-365 22-318 (353)
301 3ogk_B Coronatine-insensitive 100.0 1.4E-32 4.8E-37 332.5 -1.6 406 34-482 16-476 (592)
302 4fcg_A Uncharacterized protein 100.0 6.9E-31 2.4E-35 290.9 9.4 277 45-332 22-315 (328)
303 3ogk_B Coronatine-insensitive 100.0 3.1E-31 1.1E-35 320.7 7.1 428 116-600 64-548 (592)
304 2z66_A Variable lymphocyte rec 100.0 6.3E-30 2.2E-34 281.4 15.5 253 63-332 5-262 (306)
305 2z66_A Variable lymphocyte rec 100.0 9.5E-30 3.2E-34 280.0 13.3 276 351-632 10-293 (306)
306 1wwl_A Monocyte differentiatio 100.0 3.4E-31 1.2E-35 291.8 1.2 250 97-362 39-310 (312)
307 1ozn_A Reticulon 4 receptor; N 100.0 3.7E-29 1.3E-33 272.1 14.0 253 351-632 14-267 (285)
308 3oja_A Leucine-rich immune mol 100.0 1.1E-29 3.9E-34 296.6 9.5 215 374-603 35-250 (487)
309 1wwl_A Monocyte differentiatio 100.0 7E-30 2.4E-34 281.3 7.3 268 55-332 21-310 (312)
310 2z80_A TOLL-like receptor 2, v 100.0 1.4E-28 4.8E-33 276.3 17.6 204 124-361 30-235 (353)
311 3zyi_A Leucine-rich repeat-con 100.0 2.3E-28 7.9E-33 284.3 18.9 252 350-631 56-308 (452)
312 3zyj_A Leucine-rich repeat-con 100.0 2.6E-28 8.8E-33 282.8 19.1 252 350-631 45-297 (440)
313 3g06_A SSPH2 (leucine-rich rep 100.0 9.1E-29 3.1E-33 294.3 14.3 294 52-445 9-308 (622)
314 3zyi_A Leucine-rich repeat-con 100.0 7.3E-28 2.5E-32 280.0 19.9 221 375-625 56-278 (452)
315 3zyj_A Leucine-rich repeat-con 100.0 7.8E-28 2.7E-32 278.8 20.0 222 375-626 45-268 (440)
316 1ozn_A Reticulon 4 receptor; N 100.0 4.2E-28 1.4E-32 263.7 15.8 223 80-330 14-237 (285)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.7E-28 5.8E-33 270.9 8.2 249 266-584 30-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1E-26 3.4E-31 276.7 23.2 168 397-590 141-308 (622)
319 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-28 5.3E-33 271.3 5.9 171 77-257 10-181 (317)
320 2p1m_B Transport inhibitor res 99.9 5.2E-30 1.8E-34 310.1 -7.5 458 64-579 34-544 (594)
321 2p1m_B Transport inhibitor res 99.9 1.1E-29 3.9E-34 307.1 -6.7 86 517-602 455-543 (594)
322 4azs_A Methyltransferase WBDD; 99.9 2.1E-28 7.2E-33 289.5 3.6 187 712-924 241-438 (569)
323 2o6q_A Variable lymphocyte rec 99.9 1.9E-26 6.3E-31 248.3 16.6 217 62-283 2-218 (270)
324 3oja_A Leucine-rich immune mol 99.9 4.2E-27 1.5E-31 274.8 11.0 235 349-598 35-270 (487)
325 2z62_A TOLL-like receptor 4, v 99.9 5.2E-26 1.8E-30 245.9 17.0 228 353-609 12-243 (276)
326 1p9a_G Platelet glycoprotein I 99.9 1.5E-25 5.1E-30 243.2 17.5 209 392-631 5-213 (290)
327 2z62_A TOLL-like receptor 4, v 99.9 8.1E-25 2.8E-29 236.5 16.8 205 101-307 28-237 (276)
328 2o6q_A Variable lymphocyte rec 99.9 2.2E-24 7.6E-29 232.1 19.8 183 398-605 38-220 (270)
329 1p9a_G Platelet glycoprotein I 99.9 5E-24 1.7E-28 231.2 16.9 203 97-307 6-208 (290)
330 3rfs_A Internalin B, repeat mo 99.9 2.3E-24 7.8E-29 232.2 13.4 210 97-318 37-246 (272)
331 3rfs_A Internalin B, repeat mo 99.9 4.7E-24 1.6E-28 229.7 15.0 208 77-296 41-248 (272)
332 3m19_A Variable lymphocyte rec 99.9 4.9E-24 1.7E-28 226.6 14.1 192 63-260 3-194 (251)
333 3goz_A Leucine-rich repeat-con 99.9 3.7E-25 1.3E-29 249.1 5.6 266 105-414 2-301 (362)
334 3en9_A Glycoprotease, O-sialog 99.9 1.1E-24 3.7E-29 256.3 9.3 193 706-925 337-539 (540)
335 3goz_A Leucine-rich repeat-con 99.9 3.5E-25 1.2E-29 249.2 3.2 267 81-370 2-306 (362)
336 2ca6_A RAN GTPase-activating p 99.9 1.5E-25 5E-30 255.0 0.1 258 285-607 23-320 (386)
337 4glp_A Monocyte differentiatio 99.9 6.3E-24 2.1E-28 233.6 13.0 203 374-604 92-308 (310)
338 2xwt_C Thyrotropin receptor; s 99.9 1.1E-23 3.6E-28 222.4 13.4 197 373-600 31-236 (239)
339 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.6E-28 221.6 13.1 198 102-327 32-235 (239)
340 2ast_B S-phase kinase-associat 99.9 8E-25 2.7E-29 244.2 3.6 235 63-328 35-282 (336)
341 2ca6_A RAN GTPase-activating p 99.9 7.2E-25 2.4E-29 249.4 0.6 246 117-364 24-319 (386)
342 3m19_A Variable lymphocyte rec 99.9 1.2E-22 4.2E-27 215.8 17.6 179 399-605 16-194 (251)
343 4glp_A Monocyte differentiatio 99.9 1.5E-23 5.2E-28 230.5 10.4 223 102-330 65-306 (310)
344 4ay9_X Follicle-stimulating ho 99.9 1.2E-22 4.1E-27 227.3 14.9 246 351-630 12-262 (350)
345 3cvr_A Invasion plasmid antige 99.9 2.2E-23 7.6E-28 244.7 7.7 208 55-293 33-253 (571)
346 1h6u_A Internalin H; cell adhe 99.9 4.9E-22 1.7E-26 217.8 16.9 191 375-606 43-233 (308)
347 1h6u_A Internalin H; cell adhe 99.9 3.9E-22 1.3E-26 218.6 14.4 196 97-309 37-232 (308)
348 4ay9_X Follicle-stimulating ho 99.9 5.4E-22 1.8E-26 222.0 14.7 214 65-294 9-226 (350)
349 1zar_A RIO2 kinase; serine kin 99.9 2.4E-22 8.3E-27 216.3 11.1 162 700-909 85-274 (282)
350 2ast_B S-phase kinase-associat 99.9 3E-23 1E-27 231.4 3.8 222 127-358 49-282 (336)
351 2o6s_A Variable lymphocyte rec 99.9 9.5E-22 3.2E-26 202.6 11.8 181 63-265 5-185 (208)
352 2o6s_A Variable lymphocyte rec 99.8 5E-21 1.7E-25 197.1 14.3 181 104-295 10-190 (208)
353 4b8c_D Glucose-repressible alc 99.8 4.4E-22 1.5E-26 243.0 3.0 219 32-262 128-358 (727)
354 3cvr_A Invasion plasmid antige 99.8 9.3E-21 3.2E-25 222.5 13.9 187 102-317 60-253 (571)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 7.3E-21 2.5E-25 197.2 8.5 137 447-608 34-171 (220)
356 3e6j_A Variable lymphocyte rec 99.8 3.9E-20 1.3E-24 193.2 13.9 163 57-235 11-173 (229)
357 2v9t_B SLIT homolog 2 protein 99.8 1.4E-20 4.8E-25 195.1 8.9 96 511-606 73-168 (220)
358 1dce_A Protein (RAB geranylger 99.8 3E-22 1E-26 236.8 -5.8 222 66-311 286-550 (567)
359 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.6E-24 196.5 14.0 173 393-604 42-214 (291)
360 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.9E-26 230.9 -1.7 192 394-609 346-552 (567)
361 2xot_A Amphoterin-induced prot 99.8 6.9E-20 2.3E-24 205.7 11.8 177 400-604 21-203 (361)
362 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.4E-24 196.7 13.1 149 98-258 43-191 (291)
363 1m9s_A Internalin B; cell inva 99.8 2.7E-19 9.2E-24 212.7 15.1 198 103-317 23-220 (605)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.3E-19 7.7E-24 186.0 12.6 151 81-234 15-166 (220)
365 1m9s_A Internalin B; cell inva 99.8 2.3E-19 7.9E-24 213.2 13.6 166 79-258 45-210 (605)
366 3e6j_A Variable lymphocyte rec 99.8 6.4E-19 2.2E-23 183.9 15.0 137 445-607 40-176 (229)
367 2v9t_B SLIT homolog 2 protein 99.8 4.3E-19 1.5E-23 183.9 13.5 155 65-234 11-165 (220)
368 2xot_A Amphoterin-induced prot 99.8 2.5E-19 8.5E-24 201.1 11.9 150 82-234 23-176 (361)
369 1xeu_A Internalin C; cellular 99.8 2E-19 6.8E-24 191.9 9.6 172 395-606 17-188 (263)
370 4b8c_D Glucose-repressible alc 99.8 1.9E-19 6.6E-24 219.7 7.4 189 380-604 208-405 (727)
371 1w8a_A SLIT protein; signaling 99.8 5.4E-19 1.9E-23 178.9 7.9 135 498-632 33-168 (192)
372 4ezg_A Putative uncharacterize 99.8 2.6E-18 8.8E-23 175.0 12.1 154 418-604 41-195 (197)
373 1zth_A RIO1 serine protein kin 99.8 1.5E-18 5.2E-23 184.5 10.3 138 706-866 48-219 (258)
374 1xeu_A Internalin C; cellular 99.7 2.1E-18 7.3E-23 183.9 9.4 172 123-310 17-188 (263)
375 4ezg_A Putative uncharacterize 99.7 3.2E-18 1.1E-22 174.3 9.5 151 124-283 43-194 (197)
376 1w8a_A SLIT protein; signaling 99.7 9E-18 3.1E-22 169.9 10.8 176 424-631 11-188 (192)
377 3sb4_A Hypothetical leucine ri 99.7 1.6E-17 5.3E-22 184.0 10.3 288 172-476 24-328 (329)
378 2wfh_A SLIT homolog 2 protein 99.7 1.5E-17 5.3E-22 168.1 8.4 108 499-607 36-143 (193)
379 3sb4_A Hypothetical leucine ri 99.7 2.4E-17 8.2E-22 182.5 10.7 222 220-452 100-328 (329)
380 2wfh_A SLIT homolog 2 protein 99.7 1.2E-16 4.1E-21 161.5 12.2 130 498-631 14-144 (193)
381 2ell_A Acidic leucine-rich nuc 99.7 1.9E-16 6.5E-21 156.6 11.2 134 445-605 24-162 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 158.4 8.9 133 101-258 24-160 (168)
383 2je0_A Acidic leucine-rich nuc 99.6 2.6E-16 8.8E-21 152.2 8.8 128 445-599 17-149 (149)
384 2o6r_A Variable lymphocyte rec 99.6 6.4E-16 2.2E-20 154.2 11.6 111 498-608 32-142 (177)
385 2o6r_A Variable lymphocyte rec 99.6 6.2E-16 2.1E-20 154.3 11.1 135 63-212 5-139 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 151.4 7.4 125 126-252 18-147 (149)
387 1ds9_A Outer arm dynein; leuci 99.6 2.1E-17 7.1E-22 168.3 -2.6 156 417-604 14-186 (198)
388 4gyi_A RIO2 kinase; protein ki 99.6 4.2E-16 1.4E-20 171.0 5.2 136 706-866 96-265 (397)
389 1ds9_A Outer arm dynein; leuci 99.6 1.3E-16 4.5E-21 162.4 -0.3 136 121-261 14-156 (198)
390 4fdw_A Leucine rich hypothetic 99.6 2E-14 7E-19 162.2 16.7 271 244-603 112-383 (401)
391 4fdw_A Leucine rich hypothetic 99.6 3.4E-14 1.2E-18 160.3 17.6 270 173-482 113-383 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.6 4.3E-15 1.5E-19 147.9 8.6 133 441-604 15-154 (176)
393 4fs7_A Uncharacterized protein 99.5 7.5E-14 2.6E-18 158.5 18.7 79 512-594 314-392 (394)
394 4fs7_A Uncharacterized protein 99.5 6E-14 2.1E-18 159.3 17.8 333 91-474 61-393 (394)
395 3g39_A Variable lymphocyte rec 99.5 1.2E-14 4.2E-19 143.4 10.5 107 499-608 14-120 (170)
396 2r9u_A Variable lymphocyte rec 99.5 2.5E-14 8.6E-19 141.7 10.6 108 498-608 16-123 (174)
397 1a9n_A U2A', U2A'; complex (nu 99.5 9.2E-15 3.2E-19 145.5 7.1 135 96-258 14-153 (176)
398 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.7E-18 136.7 10.5 109 519-630 10-119 (170)
399 2r9u_A Variable lymphocyte rec 99.4 2E-13 6.9E-18 135.1 10.7 108 520-630 14-122 (174)
400 2ifg_A High affinity nerve gro 99.4 4.7E-13 1.6E-17 149.3 7.9 130 499-631 13-146 (347)
401 3un9_A NLR family member X1; l 99.3 3.6E-14 1.2E-18 158.6 -2.7 169 398-587 73-260 (372)
402 4gt6_A Cell surface protein; l 99.3 2.9E-11 9.9E-16 137.1 18.4 113 162-278 52-168 (394)
403 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 141.8 9.3 109 521-631 11-121 (347)
404 4gt6_A Cell surface protein; l 99.3 1E-10 3.6E-15 132.5 20.0 152 144-302 58-213 (394)
405 3un9_A NLR family member X1; l 99.3 2.8E-13 9.4E-18 151.4 -1.5 62 197-258 72-139 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 6.7E-11 2.3E-15 126.0 12.4 147 700-864 9-212 (263)
407 2ra8_A Uncharacterized protein 99.0 1E-10 3.4E-15 129.4 4.3 207 76-305 106-341 (362)
408 4h09_A Hypothetical leucine ri 99.0 9.5E-09 3.3E-13 115.7 20.2 148 412-589 208-355 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 7.1E-10 2.4E-14 118.0 9.3 140 702-864 17-213 (264)
410 2ra8_A Uncharacterized protein 98.9 3.6E-10 1.2E-14 124.9 4.7 161 165-329 164-341 (362)
411 4h09_A Hypothetical leucine ri 98.9 3.8E-08 1.3E-12 110.8 21.2 149 389-567 209-357 (379)
412 3rw6_A Nuclear RNA export fact 98.9 1.1E-11 3.8E-16 129.6 -9.1 23 64-86 77-99 (267)
413 3sg8_A APH(2'')-ID; antibiotic 98.9 1.6E-09 5.3E-14 118.0 6.1 196 710-925 25-288 (304)
414 3dxp_A Putative acyl-COA dehyd 98.8 6.9E-09 2.4E-13 115.9 9.8 144 710-865 43-248 (359)
415 3rw6_A Nuclear RNA export fact 98.6 1.1E-08 3.7E-13 106.9 1.5 80 515-596 167-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 3.7E-09 1.2E-13 105.4 -3.6 123 92-234 27-164 (185)
417 3r70_A Aminoglycoside phosphot 98.4 6.9E-07 2.4E-11 97.6 11.1 136 706-865 38-237 (320)
418 1io0_A Tropomodulin; LRR prote 98.4 6.1E-08 2.1E-12 96.5 0.9 113 145-257 32-163 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 1.6E-06 5.6E-11 92.3 11.2 135 712-864 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.2 4.5E-06 1.5E-10 90.4 10.6 136 711-865 25-224 (306)
421 3d1u_A Putative fructosamine-3 98.2 3.7E-06 1.3E-10 89.9 9.8 76 709-794 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.2E-05 7.6E-10 87.0 10.9 76 709-795 45-122 (362)
423 3ats_A Putative uncharacterize 97.9 1.3E-05 4.5E-10 89.0 8.5 84 710-795 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.8 4.5E-05 1.6E-09 86.0 10.0 76 710-792 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.8 8.9E-06 3E-10 78.5 3.3 34 150-183 62-95 (176)
426 3e4g_A ATP synthase subunit S, 97.8 1.2E-05 4.1E-10 77.6 3.7 84 173-256 61-150 (176)
427 2q83_A YTAA protein; 2635576, 97.5 0.00031 1.1E-08 77.3 11.2 148 711-864 38-251 (346)
428 3f7w_A Putative fructosamine-3 97.5 0.00025 8.4E-09 75.9 9.5 78 706-793 16-96 (288)
429 3jr1_A Putative fructosamine-3 97.3 0.00096 3.3E-08 71.6 10.9 141 710-861 41-232 (312)
430 1pgv_A TMD-1, tropomodulin TMD 97.2 9.2E-05 3.1E-09 72.9 1.9 72 289-360 93-169 (197)
431 2pyw_A Uncharacterized protein 97.2 0.0012 4E-08 74.9 10.6 80 834-921 231-313 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00011 3.8E-09 72.3 1.6 17 240-256 152-168 (197)
433 3dxq_A Choline/ethanolamine ki 97.0 0.0015 5.3E-08 70.1 8.9 71 710-794 23-95 (301)
434 1zyl_A Hypothetical protein YI 96.9 0.0063 2.2E-07 66.2 13.4 167 692-865 8-223 (328)
435 2ppq_A HSK, HK, homoserine kin 96.9 0.0051 1.8E-07 66.7 12.3 168 693-864 5-216 (322)
436 3rfe_A Platelet glycoprotein I 96.9 0.0014 4.9E-08 60.1 6.6 54 546-601 12-66 (130)
437 2qg7_A Ethanolamine kinase PV0 96.9 0.0034 1.2E-07 71.3 11.0 75 710-794 113-188 (458)
438 2yle_A Protein spire homolog 1 96.8 0.0077 2.6E-07 59.3 11.5 102 793-923 34-135 (229)
439 1nw1_A Choline kinase (49.2 KD 96.8 0.0025 8.6E-08 72.0 8.9 73 710-793 78-158 (429)
440 3feg_A Choline/ethanolamine ki 96.7 0.0031 1E-07 69.6 9.0 145 711-865 56-254 (379)
441 3rfe_A Platelet glycoprotein I 96.7 0.002 6.8E-08 59.2 6.0 57 522-580 12-69 (130)
442 3csv_A Aminoglycoside phosphot 96.7 0.0089 3.1E-07 65.1 12.2 32 834-865 182-217 (333)
443 3c5i_A Choline kinase; choline 96.0 0.006 2.1E-07 67.6 6.0 73 711-793 39-120 (369)
444 3i1a_A Spectinomycin phosphotr 95.9 0.01 3.6E-07 64.7 7.2 31 835-865 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.8 0.021 7.1E-07 63.2 9.0 145 711-864 58-279 (401)
446 3mes_A Choline kinase; malaria 94.7 0.039 1.3E-06 61.7 6.8 75 710-794 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.2 0.24 8.3E-06 55.2 8.0 30 836-865 245-280 (401)
448 4ano_A ESSB; membrane protein, 77.3 6.1 0.00021 39.0 8.0 83 809-926 81-164 (219)
449 2ks1_B Epidermal growth factor 77.3 2.2 7.7E-05 29.8 3.4 22 659-680 21-42 (44)
450 3cxl_A N-chimerin; SH2, RHO-GA 72.8 0.46 1.6E-05 53.8 -1.6 62 708-772 145-214 (463)
451 4ann_A ESSB; membrane protein, 71.4 4.9 0.00017 39.5 5.5 83 809-926 77-159 (215)
452 2jwa_A Receptor tyrosine-prote 70.9 2.5 8.4E-05 29.5 2.3 21 659-679 21-41 (44)
453 2l2t_A Receptor tyrosine-prote 50.1 12 0.00041 26.2 2.7 19 662-680 23-41 (44)
454 3eps_A Isocitrate dehydrogenas 39.5 3.2E+02 0.011 30.6 13.3 143 712-869 313-485 (578)
455 2lz0_A Uncharacterized protein 39.1 47 0.0016 28.0 5.5 42 533-575 11-52 (100)
456 2lz0_A Uncharacterized protein 34.6 63 0.0021 27.2 5.6 46 384-430 7-52 (100)
457 3ox7_P MH027; urokinase-type p 24.6 17 0.00058 20.3 0.1 9 63-71 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-83 Score=799.45 Aligned_cols=603 Identities=30% Similarity=0.483 Sum_probs=449.8
Q ss_pred CcCCCCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeeEEECCCCCeEEEEEcCCCCCccc---cC----------
Q 043932 28 FSAGQTNETDRLALLAIKSQLHDTSGVTSSWNNTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGI---LS---------- 94 (1017)
Q Consensus 28 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~---~~---------- 94 (1017)
++++.+.++|++||++||+++.||. .++||+.++|||+|.||+|+ .++|+.|||++++++|. ++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3445568899999999999999998 89999888899999999997 68999999999999886 43
Q ss_pred -------------cccCCCCCCCEEEccCCCCCCCCCc--ccccccccccccCCCCcccccCCCcc-cCCCcceEeeccc
Q 043932 95 -------------PYVGNLSFLRYINLSDNSFHGEIPQ--EIGNLLRLEKLALPNNSFSGTIPTNL-SRCSNLIQLRVSN 158 (1017)
Q Consensus 95 -------------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~ 158 (1017)
+.++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|||++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 4678889999999999999988888 89999999999999999998888776 7888888888888
Q ss_pred ccccccCccc---ccccCCccEEEeccccccC----------------------CCCccccCCCcccEEEEecCCCCCCC
Q 043932 159 NKLEGQIPAE---IGSLLKLQTLAVGKNYLTG----------------------RLPDFVGNLSALEVFSITGNSLGGKI 213 (1017)
Q Consensus 159 n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~----------------------~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (1017)
|++++..|.. +.++++|++|++++|.+++ .+|. ++++++|++|++++|.+++.+
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 8888777665 5555555555555555544 3333 444445555555555554444
Q ss_pred CcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccC
Q 043932 214 PTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNA 293 (1017)
Q Consensus 214 ~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 293 (1017)
|..++.+++|++|++++|++++.+|.. .+++|++|+|++|+++|.+|..++..+++|++|+|++|++++.+|..++.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 444445555555555555444444433 444555555555555555555544444677777777777776777777777
Q ss_pred CccceeecccCcccceeecc-ccccCccceEecccCcCCCCCCCChhhH-------------------hhhcc--cCccc
Q 043932 294 SNVEILDLGFNQFKGKVSID-FSSLKNLSWLNLEQNNLGMGTANDLDFV-------------------TFLTN--CSSLK 351 (1017)
Q Consensus 294 ~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~-------------------~~l~~--l~~L~ 351 (1017)
++|++|++++|++.+.+|.. |..+++|++|++++|.+....+..+... ..+.. +++|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777776555544 6777777777777776653222221111 01111 44566
Q ss_pred EEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceecccc
Q 043932 352 ILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKN 431 (1017)
Q Consensus 352 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 431 (1017)
+|++++|++++.+|..+..+ ++|+.|++++|++++..|..+..+++|++|++++|++++.+|..+..+++|++|+|++|
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp EEECCSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 66666666666666666554 35777777777777777777777777777777777777777777777777777777777
Q ss_pred ccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcc
Q 043932 432 VLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLP 511 (1017)
Q Consensus 432 ~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p 511 (1017)
++++.+|..+.++++|++|+|++|++++.+|.+++.+++|+.|++++|++++.+|..+..+..+. +|+|++|.++|.+|
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI-WLDLNTNLFNGTIP 555 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCC-EEECCSSEEESBCC
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCC-EEECCCCccCCcCC
Confidence 77777777777777777777777777777777777777777777777777777777777666554 57788777776666
Q ss_pred cc----------------------------------------------------------------------ccccccce
Q 043932 512 LQ----------------------------------------------------------------------IGNLKNLV 521 (1017)
Q Consensus 512 ~~----------------------------------------------------------------------~~~l~~L~ 521 (1017)
.. ++.+++|+
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~ 635 (768)
T 3rgz_A 556 AAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635 (768)
T ss_dssp GGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCC
T ss_pred hHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccccc
Confidence 54 34467899
Q ss_pred EEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCC
Q 043932 522 KLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 522 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
.|||++|+++|.+|..|+++++|+.|||++|+++|.+|..|+.+++|+.||||+|+++|.+|..+.++++|++|||++|+
T Consensus 636 ~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp EEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred EEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcCCCCCCCCCCCcccccCcccccCCcCCCCCCCCCCCC
Q 043932 602 LEGEVPTKGVFSSKTKLSLQGNVKLCGGTDELHLPTCPSKG 642 (1017)
Q Consensus 602 l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~c~~~~ 642 (1017)
|+|.+|..+++.++...++.|||++||.|+ ++|+...
T Consensus 716 l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~~~~ 752 (768)
T 3rgz_A 716 LSGPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCDPSN 752 (768)
T ss_dssp EEEECCSSSSGGGSCGGGGCSCTEEESTTS----CCCCSCC
T ss_pred ccccCCCchhhccCCHHHhcCCchhcCCCC----cCCCCCc
Confidence 999999999999999999999999999886 4786543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-65 Score=635.22 Aligned_cols=518 Identities=33% Similarity=0.503 Sum_probs=439.8
Q ss_pred CeEEEEEcCCCCCccccCccc-CCCCCCCEEEccCCCCCCCCCcc---c----------------------ccccccccc
Q 043932 77 QRVTRLDLSNQRIGGILSPYV-GNLSFLRYINLSDNSFHGEIPQE---I----------------------GNLLRLEKL 130 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l-~~l~~L~~L~L~~n~l~~~~p~~---~----------------------~~l~~L~~L 130 (1017)
.+++.|||++|.+++.++..+ .++++|++|||++|.+++..|.. + +.+++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 356777777777776665554 56666666666666666555544 3 455666666
Q ss_pred cCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCC
Q 043932 131 ALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLG 210 (1017)
Q Consensus 131 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 210 (1017)
+|++|++++.+|. ++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|.. .+++|++|++++|.++
T Consensus 206 ~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~ 282 (768)
T 3rgz_A 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282 (768)
T ss_dssp ECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEE
T ss_pred ECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccC
Confidence 6666666665555 677777777777777777777777777777777777777777666654 6777777777777777
Q ss_pred CCCCcccccc-cCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCc
Q 043932 211 GKIPTTLGLL-RNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDS 289 (1017)
Q Consensus 211 ~~~~~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 289 (1017)
+.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|+|++|.++|.+|...+..+++|++|++++|++++.+|..
T Consensus 283 ~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp ESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred CccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 7888887765 899999999999998999999999999999999999988899887888999999999999999889999
Q ss_pred cccCC-ccceeecccCcccceeeccccc--cCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccch
Q 043932 290 LSNAS-NVEILDLGFNQFKGKVSIDFSS--LKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPH 366 (1017)
Q Consensus 290 l~~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 366 (1017)
+..++ +|++|++++|++++..+..+.. +++|++|++++|.+.... +..+.++++|++|++++|++++.+|.
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------PPTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------CGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------CHHHhcCCCCCEEECcCCcccCcccH
Confidence 98887 8999999999999888888776 889999999999886432 34578899999999999999999999
Q ss_pred hHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccc
Q 043932 367 SIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTK 446 (1017)
Q Consensus 367 ~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 446 (1017)
.+..+. +|+.|++++|.+++.+|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..|+++++
T Consensus 437 ~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 515 (768)
T 3rgz_A 437 SLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515 (768)
T ss_dssp GGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCC
Confidence 988874 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcc---------------------------------
Q 043932 447 LAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSIT--------------------------------- 493 (1017)
Q Consensus 447 L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~--------------------------------- 493 (1017)
|++|+|++|++++.+|..++++++|+.|++++|+++|.+|..++...
T Consensus 516 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (768)
T 3rgz_A 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595 (768)
T ss_dssp CCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEE
T ss_pred CCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999998765421
Q ss_pred ------------------------------------cccceeccCCCcCCCCccccccccccceEEEccCCccccccccc
Q 043932 494 ------------------------------------TLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVT 537 (1017)
Q Consensus 494 ------------------------------------~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 537 (1017)
..+++|||++|+++|.+|..++++++|+.|+|++|+++|.+|..
T Consensus 596 ~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~ 675 (768)
T 3rgz_A 596 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675 (768)
T ss_dssp CTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChH
Confidence 22457999999999999999999999999999999999999999
Q ss_pred ccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCC-CcCc
Q 043932 538 LSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHND-LEGE 605 (1017)
Q Consensus 538 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~ 605 (1017)
|+++++|+.|||++|+++|.+|..|+.+++|++||||+|+++|.+|.. ..+.++....+.+|+ |.|.
T Consensus 676 l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 676 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 999999999999999999999999999999999999999999999964 344555566677886 6663
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.4e-61 Score=596.24 Aligned_cols=563 Identities=20% Similarity=0.220 Sum_probs=481.3
Q ss_pred CceeeEEECCC---------CCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCC
Q 043932 65 CQWTGVTCGHR---------HQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNN 135 (1017)
Q Consensus 65 c~w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 135 (1017)
|.++.|.|+.. ..+++.|+|++|.+++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 55666777532 247999999999999998889999999999999999999999999999999999999999
Q ss_pred cccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCc
Q 043932 136 SFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPT 215 (1017)
Q Consensus 136 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 215 (1017)
++++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99965555799999999999999999988888999999999999999999999999999999999999999999988887
Q ss_pred ccc--cccCcceeEeecCccccccchhhccc---------------------------CcCcEEeCCCccCccccCchhh
Q 043932 216 TLG--LLRNLVDLHVGGNQFSGTFPQSICNI---------------------------SSLERIYLPFNRFSGTLPFDIV 266 (1017)
Q Consensus 216 ~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l---------------------------~~L~~L~Ls~N~l~~~l~~~~~ 266 (1017)
.++ .+++|++|++++|++++..|..+..+ ++|+.|++++|.+++..| ..+
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~-~~~ 242 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN-TTF 242 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT-TTT
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh-hHh
Confidence 765 45899999999999998888877765 456777777777774444 445
Q ss_pred ccCCc--cceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCC----CCChhh
Q 043932 267 VNLPN--LKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGT----ANDLDF 340 (1017)
Q Consensus 267 ~~l~~--L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~ 340 (1017)
.+++. |++|+|++|++++..|..+..+++|++|++++|++.+..+..|..+++|++|++++|...... ...+.
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~- 321 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID- 321 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC-
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC-
Confidence 55544 999999999988888888888899999999999998888888889999999999876543110 00000
Q ss_pred HhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccc--cccCcccccc--ccccEEeccccCCCCCcchh
Q 043932 341 VTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIF--GIIPSGIRNL--VNLIALGMQSNQLHGTIPDV 416 (1017)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~--~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~ 416 (1017)
...+..+++|++|++++|++.+..+..+..+ ++|++|++++|.+. .+....|..+ ++|+.|++++|++++..|..
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 0136678999999999999998777666665 56999999999743 3344455544 58999999999999999999
Q ss_pred hcccccccceeccccccccccC-cccccccccceeeccCcccCCCCccccccccCCceeecCCCccc--CCccchhhhcc
Q 043932 417 IGELKNLQGLFLYKNVLQGSIP-SGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLT--GALPQQLLSIT 493 (1017)
Q Consensus 417 ~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~~~~ 493 (1017)
|..+++|+.|+|++|.+++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..+..+.
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 9999999999999999987666 68999999999999999999888999999999999999999987 56788888777
Q ss_pred cccceeccCCCcCCCCccccccccccceEEEccCCccccccc--------ccccccccceEEeccCCccCCCCCcccccc
Q 043932 494 TLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIP--------VTLSTCVSLEYLDISSNSFHGVIPHSLGFL 565 (1017)
Q Consensus 494 ~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 565 (1017)
++. +|+|++|++++..|..|..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+++.+.+..|..+
T Consensus 481 ~L~-~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 481 NLT-ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCC-EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 764 69999999998888889999999999999999986532 237899999999999999997767789999
Q ss_pred ccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCC-C-CCCCCCcccccCcccccCCcC
Q 043932 566 KSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTK-G-VFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 566 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
++|+.|+|++|++++..+..|.++++|+.|+|++|++++.+|.. + .+.+++.+++.+|||.|+|..
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999999877788899999999999999999987752 2 578899999999999999874
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.3e-60 Score=573.20 Aligned_cols=514 Identities=20% Similarity=0.269 Sum_probs=298.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCC-CC-------CCCCCCCCCCCCce---eeEEECCCCCeEEEEEcCCCCCccccCcccCC
Q 043932 31 GQTNETDRLALLAIKSQLHDT-SG-------VTSSWNNTINLCQW---TGVTCGHRHQRVTRLDLSNQRIGGILSPYVGN 99 (1017)
Q Consensus 31 ~~~~~~~~~aLl~~k~~~~~~-~~-------~~~sw~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~ 99 (1017)
+.....|++||.+||.++.++ +. ..++|+.+.+||.| .||+|+.. +||+.|+|++++++|.+|+.+++
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 344567999999999998644 22 23489988999999 99999765 89999999999999999999999
Q ss_pred CCCCCEEEccCCCC------CC------CCCcccccccccccccCCCCcccccCCCcccC-CCcceEeecc---------
Q 043932 100 LSFLRYINLSDNSF------HG------EIPQEIGNLLRLEKLALPNNSFSGTIPTNLSR-CSNLIQLRVS--------- 157 (1017)
Q Consensus 100 l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~--------- 157 (1017)
|++|++|||++|.+ .| .+|.+. +.+|+ +++++|.+.+.+|..+.. +..+..+++.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 99999999999976 33 566555 66777 888999888888877763 2233333333
Q ss_pred -----------cccccccCcccccccCCccEEEeccccccCC-----------------CCcccc--CCCcccEEEEecC
Q 043932 158 -----------NNKLEGQIPAEIGSLLKLQTLAVGKNYLTGR-----------------LPDFVG--NLSALEVFSITGN 207 (1017)
Q Consensus 158 -----------~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~L~~N 207 (1017)
.|+++| +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 455555 566666666666666666666653 555555 5666666666666
Q ss_pred CCCCCCCcccccccCcceeEeecCc-ccc-ccchhhccc------CcCcEEeCCCccCccccCc-hhhccCCccceeeec
Q 043932 208 SLGGKIPTTLGLLRNLVDLHVGGNQ-FSG-TFPQSICNI------SSLERIYLPFNRFSGTLPF-DIVVNLPNLKSLAIG 278 (1017)
Q Consensus 208 ~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~l~~-~~~~~l~~L~~L~L~ 278 (1017)
.+.+.+|..|+++++|++|++++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. ..+.++++|++|+++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCc
Confidence 6555556556566666666666665 555 555555544 55555555555555 4443 133445555555555
Q ss_pred ccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCc
Q 043932 279 GNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAAN 358 (1017)
Q Consensus 279 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 358 (1017)
+|+++|.+| .+..+++|++|++++|+++ .+|..|..+++ +|++|++++|
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~-----------------------------~L~~L~Ls~N 387 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTE-----------------------------QVENLSFAHN 387 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECT-----------------------------TCCEEECCSS
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcc-----------------------------cCcEEEccCC
Confidence 555554444 4455555555555555544 33333333333 0444444444
Q ss_pred ccccccchhHHhhc-ccceEEEecCCccccccCcccc-------ccccccEEeccccCCCCCcchhhcccccccceeccc
Q 043932 359 QFVGELPHSIANLS-SSMIEFRIGGNQIFGIIPSGIR-------NLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYK 430 (1017)
Q Consensus 359 ~l~~~~p~~~~~~~-~~L~~L~l~~N~i~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 430 (1017)
+++ .+|..+.... .+|+.|++++|.+++..|..|. .+++|++|+|++|++++..+..+..+++|++|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 433 2332221110 1233333333333333333333 344444444444444433333333344444444444
Q ss_pred cccccccCccccc-ccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCC
Q 043932 431 NVLQGSIPSGVGN-LTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGS 509 (1017)
Q Consensus 431 N~l~~~~p~~~~~-l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~ 509 (1017)
|+++ .+|..+.. +. ..+.++++|+.|++++|+++ .
T Consensus 467 N~l~-~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~--------------------------~ 502 (636)
T 4eco_A 467 NMLT-EIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLT--------------------------K 502 (636)
T ss_dssp SCCS-BCCSSSSEETT-----------------EECTTGGGCCEEECCSSCCC--------------------------B
T ss_pred CCCC-CcCHHHhcccc-----------------ccccccCCccEEECcCCcCC--------------------------c
Confidence 4444 22222111 10 00011113444444444333 2
Q ss_pred cccccc--ccccceEEEccCCcccccccccccccccceEEec------cCCccCCCCCccccccccCcEEeccCCcccCC
Q 043932 510 LPLQIG--NLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDI------SSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQ 581 (1017)
Q Consensus 510 ~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 581 (1017)
+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..|+.+++|++|+|++|++ +.
T Consensus 503 lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ 580 (636)
T 4eco_A 503 LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RK 580 (636)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CB
T ss_pred cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-Cc
Confidence 333443 45555555555555554 4555555555555555 67888888898899999999999999999 57
Q ss_pred ChhhhcccCCCcEEEcccCCCcCcCCCCC---CCCCCCcccccCcccccCCc
Q 043932 582 IPEFLENLSFLEFLNFSHNDLEGEVPTKG---VFSSKTKLSLQGNVKLCGGT 630 (1017)
Q Consensus 582 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~~~~~~~~~~~n~~~c~~~ 630 (1017)
+|..+. ++|+.||+++|++....+... .......+.+..+...|||+
T Consensus 581 ip~~~~--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~C~ 630 (636)
T 4eco_A 581 VNEKIT--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQDIRGCD 630 (636)
T ss_dssp CCSCCC--TTCCEEECCSCTTCEEECTTTHHHHHTTCCEEECCTTSEEESCG
T ss_pred cCHhHh--CcCCEEECcCCCCccccHHhcchhhhcccceeecCCccccCCCc
Confidence 787765 789999999998775433210 11223344555566666665
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.8e-58 Score=562.02 Aligned_cols=524 Identities=22% Similarity=0.249 Sum_probs=462.4
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
.+++.|+|++|.+++..+..++++++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999999999999999999999999999655557999999999999999999777789999999999999
Q ss_pred ccccccccCcccccccCCccEEEeccccccCCCCcccc--CCCcccEEEEecCCCCCCCCcccccc--------------
Q 043932 157 SNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVG--NLSALEVFSITGNSLGGKIPTTLGLL-------------- 220 (1017)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l-------------- 220 (1017)
++|.+++..|..++++++|++|++++|.+++..+..++ .+++|+.|++++|.+++..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999988777665 56899999999999998888877654
Q ss_pred -------------cCcceeEeecCccccccchhhcccCc--CcEEeCCCccCccccCchhhccCCccceeeecccccCCC
Q 043932 221 -------------RNLVDLHVGGNQFSGTFPQSICNISS--LERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGS 285 (1017)
Q Consensus 221 -------------~~L~~L~L~~n~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~ 285 (1017)
++|+.|++++|.+++..|.+|..++. |++|+|++|.++ .++...+..+++|++|++++|++++.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLN-VVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcC-ccCcccccCcccccEeeCCCCccCcc
Confidence 56788889999999889999998865 999999999998 45556678899999999999999999
Q ss_pred CCCccccCCccceeecccCcccc---------eeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEecc
Q 043932 286 IPDSLSNASNVEILDLGFNQFKG---------KVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLA 356 (1017)
Q Consensus 286 ~p~~l~~l~~L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls 356 (1017)
.|..+..+++|++|++++|...+ +....|..+++|++|++++|.+...... .+.++++|++|+++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN------MFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT------TTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh------HhccccCCcEEECC
Confidence 99999999999999999886553 2233788999999999999999875543 36789999999999
Q ss_pred Ccccccc-cch-hHHhhc-ccceEEEecCCccccccCccccccccccEEeccccCCCCCcc-hhhcccccccceeccccc
Q 043932 357 ANQFVGE-LPH-SIANLS-SSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIP-DVIGELKNLQGLFLYKNV 432 (1017)
Q Consensus 357 ~N~l~~~-~p~-~~~~~~-~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~ 432 (1017)
+|.+... ++. .+..+. ..++.|++++|+++++.|..|..+++|+.|+|++|++++.+| ..|.++++|++|++++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9986532 222 232222 479999999999999999999999999999999999987555 789999999999999999
Q ss_pred cccccCcccccccccceeeccCcccC--CCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCc
Q 043932 433 LQGSIPSGVGNLTKLAKLVMSYNSLQ--GNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSL 510 (1017)
Q Consensus 433 l~~~~p~~~~~l~~L~~L~Ls~N~i~--~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~ 510 (1017)
+++..+..|..+++|++|++++|.++ +.+|..|.++++|+.|++++|++++..|..+..+..+ ++|+|++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccc
Confidence 99999999999999999999999997 5789999999999999999999996666666666665 57999999998642
Q ss_pred c--------ccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCC
Q 043932 511 P--------LQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQI 582 (1017)
Q Consensus 511 p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 582 (1017)
+ ..|.++++|+.|+|++|+++.+.+..|.++++|+.|||++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 23789999999999999999666678999999999999999999988888999999999999999999999
Q ss_pred hhhhc-ccCCCcEEEcccCCCcCcCCC
Q 043932 583 PEFLE-NLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 583 p~~~~-~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
|..+. .+++|+.|++++|++.+.++.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 88887 899999999999999999885
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.9e-58 Score=556.38 Aligned_cols=526 Identities=21% Similarity=0.196 Sum_probs=385.8
Q ss_pred eeeEEECCC---------CCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcc
Q 043932 67 WTGVTCGHR---------HQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSF 137 (1017)
Q Consensus 67 w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 137 (1017)
+..|.|... ...++.|||++|.+++..+..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456888642 24678888888888888888888888888888888888877788888888888888888888
Q ss_pred cccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCccc
Q 043932 138 SGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTL 217 (1017)
Q Consensus 138 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l 217 (1017)
++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++..+..+.++++|++|++++|.+++..+..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 88888888888888888888888887767788888888888888888887554455558888888888888887778888
Q ss_pred ccccCcc--eeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccC-----CCCCCcc
Q 043932 218 GLLRNLV--DLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFF-----GSIPDSL 290 (1017)
Q Consensus 218 ~~l~~L~--~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~-----~~~p~~l 290 (1017)
+.+++|+ .|++++|++++..|..+.. .+|++|++++|... + ..+..+.+++...+.-+.+. ...+..+
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~---~-~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNL---L-VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCH---H-HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhH---H-HHhhhccccchhheechhhccccccccChhHh
Confidence 8888888 7888888888777766654 67888888887622 1 22333444333333322222 1122233
Q ss_pred ccCC--ccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhH
Q 043932 291 SNAS--NVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSI 368 (1017)
Q Consensus 291 ~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 368 (1017)
..+. +|+.|++++|.+++..+..|..+++|++|++++|+++..+. .+..+++|++|++++|++.+..|..+
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~-------~l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS-------GLVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS-------SCCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh-------hhcccccCCEEECccCCcCcCchhhh
Confidence 3333 78899999999988888888999999999999998875432 36778889999999999887777677
Q ss_pred HhhcccceEEEecCCccccccC-ccccccccccEEeccccCCCCCc--chhhcccccccceeccccccccccCccccccc
Q 043932 369 ANLSSSMIEFRIGGNQIFGIIP-SGIRNLVNLIALGMQSNQLHGTI--PDVIGELKNLQGLFLYKNVLQGSIPSGVGNLT 445 (1017)
Q Consensus 369 ~~~~~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 445 (1017)
..+ ++|++|++++|.+.+.++ ..+..+++|++|++++|++++.. +..+..+++|++|++++|.+++..|..|.+++
T Consensus 322 ~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 322 SNF-PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGC-TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hcc-CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 666 468999999998885444 45889999999999999998766 77889999999999999999988888899999
Q ss_pred ccceeeccCcccCCCCccc-cccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCC---ccccccccccce
Q 043932 446 KLAKLVMSYNSLQGNIPSS-LGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGS---LPLQIGNLKNLV 521 (1017)
Q Consensus 446 ~L~~L~Ls~N~i~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~---~p~~~~~l~~L~ 521 (1017)
+|++|++++|++++..|.. +.++++|+.|++++|++++..|..+..+..+ ++|+|++|.+++. .+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCcc
Confidence 9999999999998776554 8889999999999998885555444444333 2355555555442 123455556666
Q ss_pred EEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCC
Q 043932 522 KLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 522 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
+|+|++|++++..|..|+++++|+.|+|++|++++.+|..|..+++| +|+|++|++++.+|..+..+++|+.|++++|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 66666666665555556666666666666666665555666666666 66666666665555555556666666666555
Q ss_pred CcCcCC
Q 043932 602 LEGEVP 607 (1017)
Q Consensus 602 l~~~~~ 607 (1017)
+++.++
T Consensus 559 ~~c~c~ 564 (606)
T 3t6q_A 559 LDCTCS 564 (606)
T ss_dssp EECSGG
T ss_pred ccccCC
Confidence 555444
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-58 Score=564.64 Aligned_cols=503 Identities=18% Similarity=0.230 Sum_probs=309.8
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--Cce------------eeEEECCCCCeEEEEEcCCCCCc
Q 043932 30 AGQTNETDRLALLAIKSQLHDTSGVTSSWNNTI-----NL--CQW------------TGVTCGHRHQRVTRLDLSNQRIG 90 (1017)
Q Consensus 30 ~~~~~~~~~~aLl~~k~~~~~~~~~~~sw~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~ 90 (1017)
++.+..+|++||++||+++.|| +|+.+. +| |.| .||+|+. .+||+.|+|++++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 3445678999999999999887 786543 55 999 9999976 689999999999999
Q ss_pred cccCcccCCCCCCCEEEc-cCCCCCCCCCcccccc----c-----cccc------ccC-CCCccccc-----------CC
Q 043932 91 GILSPYVGNLSFLRYINL-SDNSFHGEIPQEIGNL----L-----RLEK------LAL-PNNSFSGT-----------IP 142 (1017)
Q Consensus 91 ~~~~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l----~-----~L~~------L~L-~~n~l~~~-----------~p 142 (1017)
|.+|+.+++|++|++||| ++|.++|..|...... . .++. ++. ....+++. .+
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 8998887755331111 0 0000 000 00000000 01
Q ss_pred CcccCCCcceEeeccc--ccccccCcccccccCCccEEEeccccccC-----------------CCCcccc--CCCcccE
Q 043932 143 TNLSRCSNLIQLRVSN--NKLEGQIPAEIGSLLKLQTLAVGKNYLTG-----------------RLPDFVG--NLSALEV 201 (1017)
Q Consensus 143 ~~l~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~ 201 (1017)
........++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|+.
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 1111222333333333 55555 55556666666666666666655 3777766 7777888
Q ss_pred EEEecCCCCCCCCcccccccCcceeEeecCc-ccc-ccchhhcccC-------cCcEEeCCCccCccccCc-hhhccCCc
Q 043932 202 FSITGNSLGGKIPTTLGLLRNLVDLHVGGNQ-FSG-TFPQSICNIS-------SLERIYLPFNRFSGTLPF-DIVVNLPN 271 (1017)
Q Consensus 202 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~Ls~N~l~~~l~~-~~~~~l~~ 271 (1017)
|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. ..+.++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 8887777777777777777788888888777 777 6777666655 7888888888877 6775 35567778
Q ss_pred cceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCc-cceEecccCcCCCCCCCChhhHhhhccc--C
Q 043932 272 LKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKN-LSWLNLEQNNLGMGTANDLDFVTFLTNC--S 348 (1017)
Q Consensus 272 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~l~~l--~ 348 (1017)
|+.|+|++|+++ .+| .++.+++|+.|+|++|+++ .+|..+..+++ |++|+|++|.+...+. .+..+ +
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~-------~~~~~~~~ 644 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPN-------IFNAKSVY 644 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCS-------CCCTTCSS
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCch-------hhhccccC
Confidence 888888888877 667 7777888888888888877 66666777777 8888888887763321 12333 3
Q ss_pred cccEEeccCcccccccchhHHhhcccceEEEecCCccccccCcccc--ccccccEEeccccCCCCCcchhhcccccccce
Q 043932 349 SLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIR--NLVNLIALGMQSNQLHGTIPDVIGELKNLQGL 426 (1017)
Q Consensus 349 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 426 (1017)
+|+.|+|++|++.+.+|... ..+. .+.+|+.|+|++|+++...+..+..+++|+.|
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~----------------------~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L 702 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNIS----------------------CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTI 702 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCS----------------------SCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEE
T ss_pred CCCEEECcCCcCCCccccch----------------------hhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEE
Confidence 37777777777766544211 1111 22345555555555553333333455555555
Q ss_pred eccccccccccCccccc--------ccccceeeccCcccCCCCccccc--cccCCceeecCCCcccCCccchhhhccccc
Q 043932 427 FLYKNVLQGSIPSGVGN--------LTKLAKLVMSYNSLQGNIPSSLG--NCQNLIGFNASHNKLTGALPQQLLSITTLS 496 (1017)
Q Consensus 427 ~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~i~~~~p~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~ 496 (1017)
+|++|+++ .+|..+.. +++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++
T Consensus 703 ~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~------------- 767 (876)
T 4ecn_A 703 ILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS------------- 767 (876)
T ss_dssp ECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-------------
T ss_pred ECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-------------
Confidence 55555555 33333222 225666666666665 4555554 55556555555555552
Q ss_pred ceeccCCCcCCCCccccccccccceEEEcc------CCcccccccccccccccceEEeccCCccCCCCCccccccccCcE
Q 043932 497 VYLDLSNNNLNGSLPLQIGNLKNLVKLIIS------SNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKV 570 (1017)
Q Consensus 497 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 570 (1017)
+|..+..+++|+.|+|+ +|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.
T Consensus 768 -------------lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~ 831 (876)
T 4ecn_A 768 -------------FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYI 831 (876)
T ss_dssp -------------CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCE
T ss_pred -------------cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCE
Confidence 22233333344444443 3555555566666666666666666666 34555443 46666
Q ss_pred EeccCCcccCCChhhhcccCCCcEEEcccCCCc
Q 043932 571 LNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLE 603 (1017)
Q Consensus 571 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 603 (1017)
|||++|++....+..+.....+..+.|++|++.
T Consensus 832 LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 832 LDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred EECCCCCCCccChHHccccccchheeecCCCcc
Confidence 666666665555455544444555555555544
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.8e-58 Score=554.84 Aligned_cols=512 Identities=21% Similarity=0.191 Sum_probs=310.8
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
.+++.|+|++|.+++..+..++++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 34666666666666666666666666666666666666555666666666666666666666655666666666666666
Q ss_pred ccccccccCcccccccCCccEEEeccccccC-CCCccccCCCcccEEEEecCCCCCCCCcccccccCcc----eeEeecC
Q 043932 157 SNNKLEGQIPAEIGSLLKLQTLAVGKNYLTG-RLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLV----DLHVGGN 231 (1017)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~----~L~L~~n 231 (1017)
++|++++..|..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..+..|+.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 6666665555666666666666666666664 4466666666666666666666666666666655554 5666666
Q ss_pred ccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCC---------CCCccccCCccceeec-
Q 043932 232 QFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGS---------IPDSLSNASNVEILDL- 301 (1017)
Q Consensus 232 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~---------~p~~l~~l~~L~~L~L- 301 (1017)
++++..+..+... +|++|++++|.+.+......+.+++.|+.+++..+.+.+. .+..+..+ .++.+++
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l-~l~~l~l~ 269 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV-TIDEFRLT 269 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS-EEEEEEEC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhc-cHhheecc
Confidence 6665444444433 6666666666665444445556666666666654443321 11111222 3455555
Q ss_pred ccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEec
Q 043932 302 GFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIG 381 (1017)
Q Consensus 302 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~ 381 (1017)
..|.+.+..+. +..+++|+.|++++|.+...+ .+..+++|+.|++++|++ +.+|. + ..++|++|+++
T Consensus 270 ~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp~-~--~l~~L~~L~l~ 336 (606)
T 3vq2_A 270 YTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFPT-L--DLPFLKSLTLT 336 (606)
T ss_dssp CCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCCC-C--CCSSCCEEEEE
T ss_pred ccccccccccc-cccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-ccccc-C--CCCccceeecc
Confidence 55666666655 667777777777777665433 245566677777777766 45552 2 33456666666
Q ss_pred CCccccccCccccccccccEEeccccCCCCCc--chhhcccccccceeccccccccccCcccccccccceeeccCcccCC
Q 043932 382 GNQIFGIIPSGIRNLVNLIALGMQSNQLHGTI--PDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQG 459 (1017)
Q Consensus 382 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~ 459 (1017)
+|...+.. .+..+++|++|++++|++++.. |..+..+++|++|++++|.+++ +|..|.++++|++|++++|++++
T Consensus 337 ~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~ 413 (606)
T 3vq2_A 337 MNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKR 413 (606)
T ss_dssp SCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEES
T ss_pred CCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCC
Confidence 66443322 4556666666666666665442 5566666666666666666663 44556666666666666666665
Q ss_pred CCc-cccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccc-ccccc
Q 043932 460 NIP-SSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSG-VIPVT 537 (1017)
Q Consensus 460 ~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~ 537 (1017)
..| ..+.++++|+.|++++|+++ +..|..+..+++|++|+|++|++++ .+|..
T Consensus 414 ~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 414 VTEFSAFLSLEKLLYLDISYTNTK-------------------------IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp TTTTTTTTTCTTCCEEECTTSCCE-------------------------ECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred ccChhhhhccccCCEEECcCCCCC-------------------------ccchhhhcCCCCCCEEECCCCcCCCcchHHh
Confidence 555 45566666666666666665 4445555566666666666666665 35556
Q ss_pred ccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCCCCC-CCC
Q 043932 538 LSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKGVFS-SKT 616 (1017)
Q Consensus 538 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~~~ 616 (1017)
|+.+++|+.|+|++|++++.+|..|..+++|++|+|++|++++.+|..+.++++|++|++++|+++..++....+. +++
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLA 548 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCC
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCc
Confidence 6666666666666666666666666666666666666666666666666666666666666666664333333343 356
Q ss_pred cccccCcccccCCcC
Q 043932 617 KLSLQGNVKLCGGTD 631 (1017)
Q Consensus 617 ~~~~~~n~~~c~~~~ 631 (1017)
.+++.+||+.|+|+.
T Consensus 549 ~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 549 FFNLTNNSVACICEH 563 (606)
T ss_dssp EEECCSCCCCCSSTT
T ss_pred EEEccCCCcccCCcc
Confidence 666666666666553
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.3e-57 Score=553.21 Aligned_cols=533 Identities=19% Similarity=0.199 Sum_probs=464.5
Q ss_pred EEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeeccccc
Q 043932 81 RLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNK 160 (1017)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 160 (1017)
.++.++.+++.. |..+. +++++|||++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~~i-P~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLNEI-PGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCSSC-CTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcccC-cCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 578888888754 45554 379999999999998889999999999999999999999899999999999999999999
Q ss_pred ccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchh
Q 043932 161 LEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQS 240 (1017)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~ 240 (1017)
+++..|..|+++++|++|++++|++++..|..++++++|++|++++|.+++..+..+..+++|++|++++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99999999999999999999999999887889999999999999999999865555666999999999999999888999
Q ss_pred hcccCcCc--EEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcc-----cceeecc
Q 043932 241 ICNISSLE--RIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQF-----KGKVSID 313 (1017)
Q Consensus 241 l~~l~~L~--~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l-----~~~~~~~ 313 (1017)
++.+++|+ .|++++|.+++..| ..+ ...+|+.|++++|. .++..+..+.++....+..+.+ ..+.+..
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~-~~~-~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~ 247 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEP-GAF-DSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAV 247 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECT-TTT-TTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGG
T ss_pred hhhhcccceeEEecCCCccCccCh-hHh-hhccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhH
Confidence 99999999 89999999985444 444 34689999999997 3444555555544444333222 2333445
Q ss_pred ccccC--ccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCc
Q 043932 314 FSSLK--NLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPS 391 (1017)
Q Consensus 314 ~~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~ 391 (1017)
|..+. +|+.|++++|.+...... .+..+++|++|++++|+++ .+|..+..+ ++|++|++++|.+++..|.
T Consensus 248 ~~~l~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~ 319 (606)
T 3t6q_A 248 FEGLCEMSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQI 319 (606)
T ss_dssp GGGGGGSEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGG
T ss_pred hchhhcCceeEEEeecCccCccCHH------HhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchh
Confidence 55554 799999999999876654 3678999999999999998 788877665 5799999999999999999
Q ss_pred cccccccccEEeccccCCCCCcc-hhhcccccccceecccccccccc--CcccccccccceeeccCcccCCCCccccccc
Q 043932 392 GIRNLVNLIALGMQSNQLHGTIP-DVIGELKNLQGLFLYKNVLQGSI--PSGVGNLTKLAKLVMSYNSLQGNIPSSLGNC 468 (1017)
Q Consensus 392 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l 468 (1017)
.+.++++|++|++++|.+.+.+| ..+..+++|++|++++|.+++.. |..+.++++|++|++++|++++..|..|..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 99999999999999999986655 45999999999999999999776 7889999999999999999998889999999
Q ss_pred cCCceeecCCCcccCCccch-hhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccc---ccccccccccc
Q 043932 469 QNLIGFNASHNKLTGALPQQ-LLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGV---IPVTLSTCVSL 544 (1017)
Q Consensus 469 ~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L 544 (1017)
++|+.|++++|++++..|.. +..+.. +++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHL-LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTT-CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred ccCCeEECCCCcCCCcccchhhhCccc-CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 99999999999999877765 444444 45799999999999999999999999999999999873 33679999999
Q ss_pred eEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCc
Q 043932 545 EYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGN 623 (1017)
Q Consensus 545 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n 623 (1017)
+.|+|++|++++.+|..|+.+++|+.|+|++|++++.+|..+.++++| .|++++|++++.+|. ...+.+++.+++.+|
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 557 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN 557 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCC
Confidence 999999999999999999999999999999999999999999999999 999999999998876 356788899999999
Q ss_pred ccccCCcC
Q 043932 624 VKLCGGTD 631 (1017)
Q Consensus 624 ~~~c~~~~ 631 (1017)
|+.|+|+.
T Consensus 558 ~~~c~c~~ 565 (606)
T 3t6q_A 558 PLDCTCSN 565 (606)
T ss_dssp CEECSGGG
T ss_pred CccccCCc
Confidence 99999875
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1e-56 Score=563.24 Aligned_cols=520 Identities=20% Similarity=0.196 Sum_probs=315.8
Q ss_pred CceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCC-CcccccccccccccCCCCcccccCCC
Q 043932 65 CQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEI-PQEIGNLLRLEKLALPNNSFSGTIPT 143 (1017)
Q Consensus 65 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~ 143 (1017)
|.|.+|-+ ...+++.|||++|.|++..+..++++++|++|||++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 45666655 3456788888888888877778888888888888888666666 67788888888888888888877788
Q ss_pred cccCCCcceEeecccccccccCccc--ccccCCccEEEeccccccCCCC-ccccCCCcccEEEEecCCCCCCCCcccccc
Q 043932 144 NLSRCSNLIQLRVSNNKLEGQIPAE--IGSLLKLQTLAVGKNYLTGRLP-DFVGNLSALEVFSITGNSLGGKIPTTLGLL 220 (1017)
Q Consensus 144 ~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l 220 (1017)
.|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 8888888888888888887766654 7788888888888888876654 467888888888888888887777777777
Q ss_pred --cCcceeEeecCccccccchhhcccCc------CcEEeCCCccCccccCchhhccC--Cccceeeeccc---------c
Q 043932 221 --RNLVDLHVGGNQFSGTFPQSICNISS------LERIYLPFNRFSGTLPFDIVVNL--PNLKSLAIGGN---------N 281 (1017)
Q Consensus 221 --~~L~~L~L~~n~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~l~~~~~~~l--~~L~~L~L~~n---------~ 281 (1017)
++|+.|++++|.+++..|..+..+++ |++|+|++|.+++.++..+...+ .+++.|.++.+ .
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 77888888888887777776666555 78888888877766665554332 45666666533 2
Q ss_pred cCCCCCCccccC--CccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcc
Q 043932 282 FFGSIPDSLSNA--SNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQ 359 (1017)
Q Consensus 282 l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 359 (1017)
+.+..+..+..+ ++|+.|++++|.+.+..+..|..+++|+.|+|++|++...... .+..+++|++|+|++|+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------AFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------TTTTCSSCCEEEEESCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------HhcCCCCCCEEECCCCC
Confidence 332333334433 5677777777777766666667777777777777766544332 24455666666666666
Q ss_pred cccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCc
Q 043932 360 FVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPS 439 (1017)
Q Consensus 360 l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 439 (1017)
+++..|..+..+ ++|+.|++++|++..+.+..|.++++|++|+|++|.+++.. .+++|+.|++++|+++ .+|.
T Consensus 326 l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 326 LGELYSSNFYGL-PKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CSCCCSCSCSSC-TTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC-CCCC
T ss_pred CCccCHHHhcCC-CCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc-cccc
Confidence 654444444443 23555555555555555555555555555555555555321 2455555555555555 3333
Q ss_pred ccccccccceeeccCcccCCCC-ccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccc
Q 043932 440 GVGNLTKLAKLVMSYNSLQGNI-PSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLK 518 (1017)
Q Consensus 440 ~~~~l~~L~~L~Ls~N~i~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~ 518 (1017)
. ..+++.|++++|++++.. +..+.++++|+.|++++|++++..+... +..++
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------------------------~~~~~ 451 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQT------------------------PSENP 451 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSS------------------------SCSCT
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccc------------------------cccCC
Confidence 2 234555555555555321 1123355555555555555553322222 23344
Q ss_pred cceEEEccCCccc-----ccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCc
Q 043932 519 NLVKLIISSNQFS-----GVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLE 593 (1017)
Q Consensus 519 ~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 593 (1017)
+|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+
T Consensus 452 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~ 529 (844)
T 3j0a_A 452 SLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLE 529 (844)
T ss_dssp TCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCC
T ss_pred ccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cccc
Confidence 4555555555544 22233444555555555555555555555555555555555555555544443333 4455
Q ss_pred EEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCc
Q 043932 594 FLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGT 630 (1017)
Q Consensus 594 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 630 (1017)
.|||++|+|++.+|.. +.++..+++.||||.|+|+
T Consensus 530 ~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 530 ILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp EEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred EEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 5555555555544432 3344445555555555443
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-55 Score=552.73 Aligned_cols=508 Identities=21% Similarity=0.161 Sum_probs=414.2
Q ss_pred EEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccC-CCcccCCCcceEeecccc
Q 043932 81 RLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTI-PTNLSRCSNLIQLRVSNN 159 (1017)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n 159 (1017)
..|.++++++.++. ..++|++|||++|.+++..|.+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSCCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCCCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 34566788887643 4578999999999999888999999999999999999776666 788999999999999999
Q ss_pred cccccCcccccccCCccEEEeccccccCCCCcc--ccCCCcccEEEEecCCCCCCCC-cccccccCcceeEeecCccccc
Q 043932 160 KLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDF--VGNLSALEVFSITGNSLGGKIP-TTLGLLRNLVDLHVGGNQFSGT 236 (1017)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~ 236 (1017)
.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877665 9999999999999999988765 6799999999999999999998
Q ss_pred cchhhccc--CcCcEEeCCCccCccccCchhhccCC------ccceeeecccccCCCCCCccccC---CccceeecccCc
Q 043932 237 FPQSICNI--SSLERIYLPFNRFSGTLPFDIVVNLP------NLKSLAIGGNNFFGSIPDSLSNA---SNVEILDLGFNQ 305 (1017)
Q Consensus 237 ~p~~l~~l--~~L~~L~Ls~N~l~~~l~~~~~~~l~------~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N~ 305 (1017)
.+..+..+ ++|+.|+|+.|.+.+..|..+ ..++ .|+.|++++|.+++..+..+... .+++.|+++.+.
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDW-GKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCC-CSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred CHHHcccccCCccceEECCCCccccccccch-hhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 99999887 899999999999987766543 2233 38888888888887777766543 456667666443
Q ss_pred ccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcc--cCcccEEeccCcccccccchhHHhhcccceEEEecCC
Q 043932 306 FKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTN--CSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGN 383 (1017)
Q Consensus 306 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N 383 (1017)
+... +..+.+....... +.. .++|+.|++++|.+.+..|..+..+ ++|+.|++++|
T Consensus 243 ~~~~---------------~~~~~l~~~~~~~------f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n 300 (844)
T 3j0a_A 243 MGAG---------------FGFHNIKDPDQNT------FAGLARSSVRHLDLSHGFVFSLNSRVFETL-KDLKVLNLAYN 300 (844)
T ss_dssp CBCS---------------SSCSSSTTGGGTT------TTTTTTSCCCEEECTTCCCCEECSCCSSSC-CCCCEEEEESC
T ss_pred cccc---------------ccccccCCCChhh------hhccccCCccEEECCCCcccccChhhhhcC-CCCCEEECCCC
Confidence 3210 1122222111111 122 3678888888888876666555544 46888888888
Q ss_pred ccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCcc
Q 043932 384 QIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPS 463 (1017)
Q Consensus 384 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~ 463 (1017)
+++++.+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|.+++ ++
T Consensus 301 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~- 378 (844)
T 3j0a_A 301 KINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH- 378 (844)
T ss_dssp CCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS-
T ss_pred cCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc-
Confidence 8888888899999999999999999998889999999999999999999998778889999999999999999984 33
Q ss_pred ccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCc-cccccccccceEEEccCCcccccccc-ccccc
Q 043932 464 SLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSL-PLQIGNLKNLVKLIISSNQFSGVIPV-TLSTC 541 (1017)
Q Consensus 464 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l 541 (1017)
.+++|+.|++++|+++ .+|.... ...+|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+
T Consensus 379 ---~~~~L~~L~l~~N~l~-~l~~~~~----~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 450 (844)
T 3j0a_A 379 ---FIPSIPDIFLSGNKLV-TLPKINL----TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN 450 (844)
T ss_dssp ---SCCSCSEEEEESCCCC-CCCCCCT----TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSC
T ss_pred ---CCCCcchhccCCCCcc-ccccccc----ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccC
Confidence 3788999999999998 6665432 2356999999998642 23456899999999999999976544 46778
Q ss_pred ccceEEeccCCccC-----CCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCCCCCCCC
Q 043932 542 VSLEYLDISSNSFH-----GVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKGVFSSKT 616 (1017)
Q Consensus 542 ~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 616 (1017)
++|+.|+|++|.++ +..|..|..+++|+.|+|++|++++.+|..|.++++|+.|+|++|+|++.+|.... .+++
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~ 529 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLE 529 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCC
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-cccc
Confidence 99999999999997 45567899999999999999999999999999999999999999999987776433 7889
Q ss_pred cccccCcccc
Q 043932 617 KLSLQGNVKL 626 (1017)
Q Consensus 617 ~~~~~~n~~~ 626 (1017)
.+++++|...
T Consensus 530 ~L~Ls~N~l~ 539 (844)
T 3j0a_A 530 ILDISRNQLL 539 (844)
T ss_dssp EEEEEEECCC
T ss_pred EEECCCCcCC
Confidence 9999998643
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.7e-53 Score=509.17 Aligned_cols=495 Identities=17% Similarity=0.174 Sum_probs=378.2
Q ss_pred CCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCC
Q 043932 64 LCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPT 143 (1017)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 143 (1017)
.|.|.|| | |.++++++.+ |+.+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c----------~~~~~~l~~i-p~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-C----------DGRSRSFTSI-PSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-E----------ECTTSCCSSC-CSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-E----------ECCCCccccc-cccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 8 4566777754 44443 7899999999999988889999999999999999999988889
Q ss_pred cccCCCcceEeecccccccccCcccccccCCccEEEeccccccC-CCCccccCCCcccEEEEecCCCCCCCC-ccccccc
Q 043932 144 NLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTG-RLPDFVGNLSALEVFSITGNSLGGKIP-TTLGLLR 221 (1017)
Q Consensus 144 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~ 221 (1017)
.|+++++|++|+|++|++++..|..|+++++|++|++++|++++ ..|..++++++|++|++++|.+.+.+| ..|+.++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 99999999999999999998888889999999999999999987 357889999999999999999555554 6899999
Q ss_pred CcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCC--C-CccccCCccce
Q 043932 222 NLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSI--P-DSLSNASNVEI 298 (1017)
Q Consensus 222 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~--p-~~l~~l~~L~~ 298 (1017)
+|++|++++|++++..|..+..+++|++|+++.|.+. .+|..++..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999986 777777778999999999999998742 2 23345789999
Q ss_pred eecccCcccceeecc----ccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccc----hhHHh
Q 043932 299 LDLGFNQFKGKVSID----FSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELP----HSIAN 370 (1017)
Q Consensus 299 L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 370 (1017)
|++++|++++..+.. +..+++|+.+++++|.+.....-.......+..+.+|+.|+++++.+..... ..+..
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~ 307 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYS 307 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHH
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhh
Confidence 999999998755443 4667899999999998765332111112234567788888888887653210 11223
Q ss_pred hcccceEEEecCCccccccCccccccccccEEeccccCCCCCcch---hhcccccccceeccccccccccC--ccccccc
Q 043932 371 LSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPD---VIGELKNLQGLFLYKNVLQGSIP--SGVGNLT 445 (1017)
Q Consensus 371 ~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~ 445 (1017)
...++++|++++|.+..++...+.++++|++|+|++|++++..|. .++.+++|++|+|++|++++..+ ..+..++
T Consensus 308 ~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 308 LLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp HSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred hcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 345677777777776643333335677777777777777665532 35666777777777777764322 3466667
Q ss_pred ccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEc
Q 043932 446 KLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLII 525 (1017)
Q Consensus 446 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 525 (1017)
+|++|++++|+++ .+|..+..+++|+.|++++|+++ .+|..+ .++|++|+|
T Consensus 388 ~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~--------------------------~l~~~~--~~~L~~L~L 438 (549)
T 2z81_A 388 NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR--------------------------VVKTCI--PQTLEVLDV 438 (549)
T ss_dssp TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS--------------------------CCCTTS--CTTCSEEEC
T ss_pred CCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc--------------------------cccchh--cCCceEEEC
Confidence 7777777777776 46666666667777777766665 122222 146788888
Q ss_pred cCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCc
Q 043932 526 SSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGE 605 (1017)
Q Consensus 526 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 605 (1017)
++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 888887643 46788888888888888 4555 46788888888888888888888888888888888888888887
Q ss_pred CCC
Q 043932 606 VPT 608 (1017)
Q Consensus 606 ~~~ 608 (1017)
+|.
T Consensus 513 ~~~ 515 (549)
T 2z81_A 513 CPR 515 (549)
T ss_dssp HHH
T ss_pred Ccc
Confidence 774
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-52 Score=510.27 Aligned_cols=492 Identities=19% Similarity=0.167 Sum_probs=432.2
Q ss_pred CCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEee
Q 043932 76 HQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLR 155 (1017)
Q Consensus 76 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 155 (1017)
-.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..|..++++++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 35799999999999999899999999999999999999988899999999999999999999987778999999999999
Q ss_pred cccccccc-cCcccccccCCccEEEeccccccCCCCccccCCCccc----EEEEecCCCCCCCCcccccccCcceeEeec
Q 043932 156 VSNNKLEG-QIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALE----VFSITGNSLGGKIPTTLGLLRNLVDLHVGG 230 (1017)
Q Consensus 156 L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 230 (1017)
|++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++|+ +|++++|.+++..+..+... +|++|++++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~ 213 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG 213 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEES
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccC
Confidence 99999986 6799999999999999999999999899999888776 89999999997666666655 999999999
Q ss_pred Cccc-cccchhhcccCcCcEEeCCCccCcc-----ccCchhhccCC--ccceeee-cccccCCCCCCccccCCccceeec
Q 043932 231 NQFS-GTFPQSICNISSLERIYLPFNRFSG-----TLPFDIVVNLP--NLKSLAI-GGNNFFGSIPDSLSNASNVEILDL 301 (1017)
Q Consensus 231 n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~-----~l~~~~~~~l~--~L~~L~L-~~n~l~~~~p~~l~~l~~L~~L~L 301 (1017)
|.++ +..|..+.++++|+.+++..+.+.+ .++...+..+. .++.+++ ..|.+.+.+|. +..+++|+.|++
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 9997 4678899999999999987665532 12233333332 4566677 77888888887 999999999999
Q ss_pred ccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEec
Q 043932 302 GFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIG 381 (1017)
Q Consensus 302 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~ 381 (1017)
++|.+.... .+..+++|++|++++|.++..+ .+ .+++|+.|++++|+..+.+ .+. ..++|++|+++
T Consensus 293 ~~~~~~~l~--~l~~~~~L~~L~l~~n~l~~lp--------~~-~l~~L~~L~l~~n~~~~~~--~~~-~l~~L~~L~ls 358 (606)
T 3vq2_A 293 AGVSIKYLE--DVPKHFKWQSLSIIRCQLKQFP--------TL-DLPFLKSLTLTMNKGSISF--KKV-ALPSLSYLDLS 358 (606)
T ss_dssp ESCCCCCCC--CCCTTCCCSEEEEESCCCSSCC--------CC-CCSSCCEEEEESCSSCEEC--CCC-CCTTCCEEECC
T ss_pred cCccchhhh--hccccccCCEEEcccccCcccc--------cC-CCCccceeeccCCcCccch--hhc-cCCCCCEEECc
Confidence 999997654 8899999999999999995443 13 7899999999999665544 233 33579999999
Q ss_pred CCcccccc--CccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccC-cccccccccceeeccCcccC
Q 043932 382 GNQIFGII--PSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIP-SGVGNLTKLAKLVMSYNSLQ 458 (1017)
Q Consensus 382 ~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~i~ 458 (1017)
+|.+++.. +..+..+++|++|++++|.+++ .|..|..+++|+.|++++|++++..| ..+.++++|++|++++|+++
T Consensus 359 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 437 (606)
T 3vq2_A 359 RNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437 (606)
T ss_dssp SSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCE
T ss_pred CCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCC
Confidence 99999874 8889999999999999999985 66889999999999999999998877 68999999999999999999
Q ss_pred CCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccc
Q 043932 459 GNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTL 538 (1017)
Q Consensus 459 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 538 (1017)
+..|..+.++++|+.|++++|++++. .+|..+..+++|+.|+|++|++++.+|..|
T Consensus 438 ~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 438 IDFDGIFLGLTSLNTLKMAGNSFKDN------------------------TLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGG------------------------EECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCc------------------------chHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 99999999999999999999998721 356778899999999999999999999999
Q ss_pred cccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccC-CCcEEEcccCCCcCcCCCC
Q 043932 539 STCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLS-FLEFLNFSHNDLEGEVPTK 609 (1017)
Q Consensus 539 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~ 609 (1017)
+++++|+.|+|++|++++.+|..|+.+++|++|+|++|+++ .+|..+..++ +|+.|++++|++.+.++..
T Consensus 494 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred cccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 99999999999999999999999999999999999999999 6787799997 5999999999999988863
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-52 Score=500.56 Aligned_cols=492 Identities=22% Similarity=0.252 Sum_probs=296.4
Q ss_pred eEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecc
Q 043932 78 RVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVS 157 (1017)
Q Consensus 78 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 157 (1017)
+++.|||++|.+++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 45666666666666655566666666666666666665555556666666666666666665555666666666666666
Q ss_pred cccccccCcccccccCCccEEEeccccccC-CCCccccCCCcccEEEEecCCCCCCCCcccccccCc----ceeEeecCc
Q 043932 158 NNKLEGQIPAEIGSLLKLQTLAVGKNYLTG-RLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNL----VDLHVGGNQ 232 (1017)
Q Consensus 158 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L----~~L~L~~n~ 232 (1017)
+|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..+..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 666664444456666666666666666654 346666666666666666666665555566666665 566666666
Q ss_pred cccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCC------CCCCccccCC--ccceeecccC
Q 043932 233 FSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFG------SIPDSLSNAS--NVEILDLGFN 304 (1017)
Q Consensus 233 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~------~~p~~l~~l~--~L~~L~Ls~N 304 (1017)
+++..|..+..+ +|++|++++|..........+..+++++.+.+..+.+.. .....+..+. .++.+++++|
T Consensus 189 l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 189 MNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred ceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 665555555544 566666666543322222333444444444443322211 1111122221 2344444444
Q ss_pred -cccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCC
Q 043932 305 -QFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGN 383 (1017)
Q Consensus 305 -~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N 383 (1017)
.+.+..+..|..+++|++|++++|.+..... .+..+ +|+.|++++|.+. .+|.
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~-------~~~~~-~L~~L~l~~n~~~-~l~~----------------- 321 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD-------FSYNF-GWQHLELVNCKFG-QFPT----------------- 321 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECSCCB-------CCSCC-CCSEEEEESCBCS-SCCB-----------------
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchhhhh-------hhccC-CccEEeeccCccc-ccCc-----------------
Confidence 4444445555555555555555555442221 12333 4555555555444 3332
Q ss_pred ccccccCccccccccccEEeccccCCCCCcchhhcccccccceecccccccccc--CcccccccccceeeccCcccCCCC
Q 043932 384 QIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSI--PSGVGNLTKLAKLVMSYNSLQGNI 461 (1017)
Q Consensus 384 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~i~~~~ 461 (1017)
..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|++++|++++.
T Consensus 322 ----------~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~- 388 (570)
T 2z63_A 322 ----------LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM- 388 (570)
T ss_dssp ----------CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-
T ss_pred ----------ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-
Confidence 2344455555555554433332 44455555555555554332 34444555555555555555432
Q ss_pred ccccccccCCceeecCCCcccCCccc-hhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccc-cccccccc
Q 043932 462 PSSLGNCQNLIGFNASHNKLTGALPQ-QLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFS-GVIPVTLS 539 (1017)
Q Consensus 462 p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 539 (1017)
|..+..+++|+.|++++|++++..|. .+..+.. +++|++++|.+.+..|..+..+++|++|+|++|+++ +.+|..|.
T Consensus 389 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 389 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN-LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTT-CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred cccccccCCCCEEEccCCccccccchhhhhcCCC-CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 22245555555555555555543332 2222222 234555555555677788899999999999999998 57899999
Q ss_pred ccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCC
Q 043932 540 TCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKG 610 (1017)
Q Consensus 540 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 610 (1017)
.+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..+.++++|+.|++++|+++|.+|...
T Consensus 468 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 99999999999999999989999999999999999999999888889999999999999999999998753
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=445.98 Aligned_cols=264 Identities=30% Similarity=0.458 Sum_probs=207.0
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..+++++.++||+|+||+||+|++.. .||||+++... ....+.|.+|++++++++|||||+++++|.. +
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~ 104 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------D 104 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------C
Confidence 44678889999999999999999853 48999987443 3345789999999999999999999998743 3
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.+++..... .+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+||
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCC
T ss_pred eEEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeec
Confidence 47999999999999999976543 799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccC---CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG---SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|+|+....... ........||+.|||||++.+ ..|+.++|||||||++|||+||+.||........ ....
T Consensus 177 Gla~~~~~~~~------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~ 249 (307)
T 3omv_A 177 GLATVKSRWSG------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFM 249 (307)
T ss_dssp SSCBC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHH
T ss_pred cCceecccCCc------ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHH
Confidence 99986543221 112234679999999999864 3589999999999999999999999975422211 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
...... .| .......++++++.+++.+||+.||++|||+.||+++|+.++..+
T Consensus 250 ~~~~~~-------~p---------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 250 VGRGYA-------SP---------------DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHTTCC-------CC---------------CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HhcCCC-------CC---------------CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111000 00 001122345678999999999999999999999999999887665
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-50 Score=485.79 Aligned_cols=513 Identities=19% Similarity=0.204 Sum_probs=414.6
Q ss_pred EEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccc
Q 043932 82 LDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKL 161 (1017)
Q Consensus 82 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 161 (1017)
++-++.+++.+ |..+. +++++|||++|.+++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 12 ~~c~~~~l~~i-p~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFYKI-PDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCSSC-CSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcccc-CCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 34445556543 33332 5799999999999987788899999999999999999987788899999999999999999
Q ss_pred cccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCC-CCCcccccccCcceeEeecCccccccchh
Q 043932 162 EGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGG-KIPTTLGLLRNLVDLHVGGNQFSGTFPQS 240 (1017)
Q Consensus 162 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~ 240 (1017)
++..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 98888899999999999999999997766679999999999999999987 46888999999999999999998888888
Q ss_pred hcccCcC----cEEeCCCccCccccCchhhccCCccceeeecccccCC-CCCCccccCCccceeecccCcccceeecccc
Q 043932 241 ICNISSL----ERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFG-SIPDSLSNASNVEILDLGFNQFKGKVSIDFS 315 (1017)
Q Consensus 241 l~~l~~L----~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 315 (1017)
++.+++| +.|++++|.++ .++...+... +|+.|++++|.... .++..+..+++++.+++..+.+.
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~-~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~-------- 238 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR-------- 238 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECC--------
T ss_pred ccchhccchhhhhcccCCCCce-ecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeecccccc--------
Confidence 8888888 78888888887 4444555444 78888888775432 23445556666666555433221
Q ss_pred ccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCc-ccccccchhHHhhcccceEEEecCCccccccCcccc
Q 043932 316 SLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAAN-QFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIR 394 (1017)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~ 394 (1017)
...+++.+ ....+ ..+.++ .++.++++++ .+.+.+|..+..+ ++++.|++++|.+++ +|..+.
T Consensus 239 ~~~~l~~~----------~~~~~---~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~~-l~~~~~ 302 (570)
T 2z63_A 239 NEGNLEKF----------DKSAL---EGLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIER-VKDFSY 302 (570)
T ss_dssp CCSSCEEC----------CTTTT---GGGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEECS-CCBCCS
T ss_pred Cchhhhhc----------chhhh---cccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccchh-hhhhhc
Confidence 11111111 11111 111222 3667777777 6777777776665 568999999999884 677888
Q ss_pred ccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCC--ccccccccCCc
Q 043932 395 NLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNI--PSSLGNCQNLI 472 (1017)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~--p~~~~~l~~L~ 472 (1017)
.+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|+
T Consensus 303 ~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~ 376 (570)
T 2z63_A 303 NF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376 (570)
T ss_dssp CC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCC
T ss_pred cC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccC
Confidence 88 9999999999998 4554 5789999999999999877665 78999999999999998654 77889999999
Q ss_pred eeecCCCcccCCccchhhhcccccceeccCCCcCCCCcc-ccccccccceEEEccCCcccccccccccccccceEEeccC
Q 043932 473 GFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLP-LQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISS 551 (1017)
Q Consensus 473 ~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 551 (1017)
.|++++|++++ +|..+..+..+ ++|++++|.+.+..| ..+.++++|++|++++|++++..|..|.++++|+.|+|++
T Consensus 377 ~L~l~~n~l~~-~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 454 (570)
T 2z63_A 377 YLDLSFNGVIT-MSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454 (570)
T ss_dssp EEECCSCSEEE-EEEEEETCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred EEECCCCcccc-ccccccccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcC
Confidence 99999999985 44446666555 579999999998766 5789999999999999999999999999999999999999
Q ss_pred CccC-CCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCcccccCC
Q 043932 552 NSFH-GVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGNVKLCGG 629 (1017)
Q Consensus 552 N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~ 629 (1017)
|+++ +.+|..|..+++|++|+|++|++++..|..+.++++|+.|++++|++++.+|. ...+.+++.+++.+|++.|+|
T Consensus 455 n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9998 67899999999999999999999999999999999999999999999998875 467889999999999999988
Q ss_pred cC
Q 043932 630 TD 631 (1017)
Q Consensus 630 ~~ 631 (1017)
+.
T Consensus 535 ~~ 536 (570)
T 2z63_A 535 PR 536 (570)
T ss_dssp TT
T ss_pred cc
Confidence 75
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-51 Score=446.03 Aligned_cols=264 Identities=25% Similarity=0.420 Sum_probs=212.5
Q ss_pred ccccccCcccccCCceEEEEEeC-----CCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 705 SEFASSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++++|.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----
Confidence 57888999999999999999975 35789999999866666678899999999999999999999999765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCC-------CccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC
Q 043932 780 DFKALVFECMKNGSLEDWLHQSND-------HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 852 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 852 (1017)
+..++||||+++|+|.++++..+. ......+++.+++.|+.|||+||+|||++ +||||||||+|||++.+
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 568999999999999999986531 11234799999999999999999999999 99999999999999999
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccC
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEG 931 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~ 931 (1017)
+.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......+
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~------~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~ 238 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEE------ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred CcEEECCcccceecCCCCcee------ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 999999999998664332111 1122468999999999999999999999999999999999 899997642211
Q ss_pred ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 932 LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
.......... ...+..+++++.+++.+||+.||++|||++||.+.|+.+.+
T Consensus 239 -~~~~i~~~~~---------------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 239 -VIECITQGRV---------------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp -HHHHHHHTCC---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHcCCC---------------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111111000 01122356788999999999999999999999999988764
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.9e-51 Score=445.98 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=210.6
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
+.|++.++||+|+||+||+|+++.+|+.||||++........+.+.+|++++++++|||||++++++.+. +..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEEE
Confidence 4689999999999999999999999999999999876666667789999999999999999999999765 67999
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
||||++||+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 99999999999999753 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCc
Q 043932 865 FLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPE 944 (1017)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 944 (1017)
.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|++||....... .+... ....+.
T Consensus 219 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i-~~~~~~ 288 (346)
T 4fih_A 219 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI-RDNLPP 288 (346)
T ss_dssp ECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH-HHSSCC
T ss_pred ecCCCC--------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHH-HcCCCC
Confidence 764322 12234689999999999999999999999999999999999999997642211 11111 111110
Q ss_pred hhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 945 KVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 945 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. .....+++++.+++.+||+.||++|||+.|+++|
T Consensus 289 ~~------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RL------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CC------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 0111235678999999999999999999999886
No 19
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-51 Score=448.16 Aligned_cols=265 Identities=25% Similarity=0.416 Sum_probs=208.3
Q ss_pred ccccccCcccccCCceEEEEEeC-----CCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 705 SEFASSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++++|.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG----- 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 46788899999999999999875 36889999999876666678899999999999999999999999765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCC---------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDH---------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 850 (1017)
+..|+||||+++|+|.++++..... ....++++.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 5689999999999999999865421 1224699999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccc
Q 043932 851 HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFT 929 (1017)
Q Consensus 851 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~ 929 (1017)
+++.+||+|||+|+........ .......||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred CCCcEEEcccccceeccCCCcc------eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999866433211 11223579999999999999999999999999999999999 8999976422
Q ss_pred cCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcc
Q 043932 930 EGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTR 1009 (1017)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 1009 (1017)
.. .......... ...+..+++++.+++.+||+.||++|||+.||+++|+.+.
T Consensus 267 ~~-~~~~i~~g~~---------------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 267 TE-AIDCITQGRE---------------------------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HH-HHHHHHHTCC---------------------------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HH-HHHHHHcCCC---------------------------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11 0111100000 0111235678899999999999999999999999999887
Q ss_pred cc
Q 043932 1010 ET 1011 (1017)
Q Consensus 1010 ~~ 1011 (1017)
+.
T Consensus 319 ~~ 320 (329)
T 4aoj_A 319 QA 320 (329)
T ss_dssp HS
T ss_pred hC
Confidence 53
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.9e-51 Score=445.10 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=204.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+++.+|++++++++|||||++++++.+. +.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-----~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN-----GS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-----CE
Confidence 368999999999999999999999999999999997543 23457889999999999999999999998765 77
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.|+|||||+||+|.+++...+. ..+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTT
T ss_pred EEEEEeCCCCCcHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccc
Confidence 9999999999999999976532 3678999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|++||....... .........
T Consensus 171 la~~~~~~~--------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~ 241 (350)
T 4b9d_A 171 IARVLNSTV--------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGS 241 (350)
T ss_dssp EESCCCHHH--------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTC
T ss_pred cceeecCCc--------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCC
Confidence 998764321 11223579999999999999999999999999999999999999997642211 111111111
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.+. ....+++++.+++.+||+.||++|||+.|+++|
T Consensus 242 ~~~---------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 FPP---------------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCC---------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC---------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 110 111235678999999999999999999999876
No 21
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-50 Score=441.37 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=210.4
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.++++++|||||++++++.+. +..
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~-----~~~ 125 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREG-----PWV 125 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEEC-----CEE
Confidence 34578889999999999999999999999999999975432 24799999999999999999998765 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC-CeEEeecc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VSHVGDFG 861 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG 861 (1017)
|+||||++||+|.++++..+ .+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFG 196 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFG 196 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCT
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCC
Confidence 99999999999999998654 689999999999999999999999 999999999999999987 69999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+|+.+........ ......++||+.|||||++.+..|+.++||||+||++|||++|++||........ ........
T Consensus 197 la~~~~~~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~ 272 (336)
T 4g3f_A 197 HALCLQPDGLGKS---LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP 272 (336)
T ss_dssp TCEEC---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC
T ss_pred CCeEccCCCcccc---eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC
Confidence 9987754322111 1112235799999999999999999999999999999999999999986543322 22221111
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
. .. ...+..+++.+.+++.+||+.||++|||+.|++++|..+.+.
T Consensus 273 ~--~~-----------------------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 273 P--PI-----------------------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp C--GG-----------------------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--Cc-----------------------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 0 00 011223466789999999999999999999999998876544
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1e-49 Score=478.09 Aligned_cols=489 Identities=18% Similarity=0.147 Sum_probs=408.1
Q ss_pred CCCCCCCCCceeeEEECC--CCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCC
Q 043932 57 SWNNTINLCQWTGVTCGH--RHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPN 134 (1017)
Q Consensus 57 sw~~~~~~c~w~gv~c~~--~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 134 (1017)
.|.+. ..|++.+++.-+ ....++.|+|++|++++..+..++++++|++|+|++|.+++..|.+|+++++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 45433 225566665432 235799999999999999999999999999999999999988889999999999999999
Q ss_pred CcccccCCCcccCCCcceEeecccccccc-cCcccccccCCccEEEeccccccCCCC-ccccCCCcccEEEEecCCCCCC
Q 043932 135 NSFSGTIPTNLSRCSNLIQLRVSNNKLEG-QIPAEIGSLLKLQTLAVGKNYLTGRLP-DFVGNLSALEVFSITGNSLGGK 212 (1017)
Q Consensus 135 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 212 (1017)
|++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+.+.+| ..|+++++|++|++++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998777779999999999999999987 467889999999999999999554554 6899999999999999999999
Q ss_pred CCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCcccc--CchhhccCCccceeeecccccCCCCC---
Q 043932 213 IPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTL--PFDIVVNLPNLKSLAIGGNNFFGSIP--- 287 (1017)
Q Consensus 213 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l--~~~~~~~l~~L~~L~L~~n~l~~~~p--- 287 (1017)
.|..++.+++|++|++++|.+....+..+..+++|++|++++|++++.. |......+++|+.|++++|.+++..+
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 9999999999999999999987443334467999999999999998532 33445567899999999999986543
Q ss_pred -CccccCCccceeecccCcccceee------ccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCccc
Q 043932 288 -DSLSNASNVEILDLGFNQFKGKVS------IDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQF 360 (1017)
Q Consensus 288 -~~l~~l~~L~~L~Ls~N~l~~~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 360 (1017)
..+..+++|+.+++++|.+.+... ..+..+++|+.|++.++.+...... .+....+....+|+.|++++|++
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~-~~l~~~~~~~~~L~~L~l~~n~l 322 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLF-YDLSTVYSLLEKVKRITVENSKV 322 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGS-CCCCHHHHHSTTCCEEEEESSCC
T ss_pred HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhc-ccchhhhhhcccceEEEeccCcc
Confidence 445677899999999999887532 2357788999999999987543210 01112234567899999999998
Q ss_pred ccccchhHHhhcccceEEEecCCccccccC---ccccccccccEEeccccCCCCCcc--hhhcccccccceecccccccc
Q 043932 361 VGELPHSIANLSSSMIEFRIGGNQIFGIIP---SGIRNLVNLIALGMQSNQLHGTIP--DVIGELKNLQGLFLYKNVLQG 435 (1017)
Q Consensus 361 ~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~ 435 (1017)
. .+|..++...++|++|++++|++++..| ..++.+++|++|+|++|++++..+ ..+..+++|++|+|++|+++
T Consensus 323 ~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 400 (549)
T 2z81_A 323 F-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH- 400 (549)
T ss_dssp C-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-
T ss_pred c-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-
Confidence 7 7888887666789999999999998764 458899999999999999997653 67999999999999999999
Q ss_pred ccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcccccc
Q 043932 436 SIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIG 515 (1017)
Q Consensus 436 ~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~ 515 (1017)
.+|..+..+++|++|++++|+|+ .+|..+ .++|+.|++++|+++ +. +.
T Consensus 401 ~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~-------------------------~~----~~ 448 (549)
T 2z81_A 401 PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD-------------------------SF----SL 448 (549)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCS-------------------------CC----CC
T ss_pred cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChh-------------------------hh----cc
Confidence 68989999999999999999998 445433 256777777777766 22 14
Q ss_pred ccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCCh
Q 043932 516 NLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIP 583 (1017)
Q Consensus 516 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (1017)
.+++|++|+|++|+|+ .+|. ...+++|+.|||++|+|++.+|+.|..+++|+.|+|++|++++..|
T Consensus 449 ~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 449 FLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 6789999999999999 5665 5789999999999999999999999999999999999999999887
No 23
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-50 Score=431.93 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=201.2
Q ss_pred ccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEE
Q 043932 707 FASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 707 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
|++.++||+|+||+||+|++..+++.||+|++.... ....+++.+|++++++++|||||+++++|.... .+.+..|+
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEE
Confidence 366778999999999999999999999999997543 334577999999999999999999999986531 22367899
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeCC-CCCeEEeecc
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDH-DMVSHVGDFG 861 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~DfG 861 (1017)
||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||
T Consensus 107 vmEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFG 177 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTT
T ss_pred EEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCc
Confidence 999999999999998654 789999999999999999999998 6 999999999999974 7999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||++||.................
T Consensus 178 la~~~~~~----------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~ 246 (290)
T 3fpq_A 178 LATLKRAS----------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV 246 (290)
T ss_dssp GGGGCCTT----------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC
T ss_pred CCEeCCCC----------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCC
Confidence 99754321 2234689999999999876 699999999999999999999999965322111111110000
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.+.. ....+++++.+++.+||+.||++|||+.|+++|
T Consensus 247 ~~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 KPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCC--------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 011124568899999999999999999999876
No 24
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.4e-50 Score=439.90 Aligned_cols=263 Identities=23% Similarity=0.354 Sum_probs=210.1
Q ss_pred ccccccCcccccCCceEEEEEeC-----CCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 705 SEFASSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
+++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|...
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD---- 101 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC----
Confidence 45677889999999999999974 357889999997443 33457899999999999999999999999764
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceE
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 848 (1017)
+..++||||+++|+|.+++...... .....+++.+++.|+.|||+||+|||++ +||||||||+|||
T Consensus 102 -~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 102 -QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp -SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred -CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 5679999999999999999764321 1234689999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcc
Q 043932 849 LDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAA 927 (1017)
Q Consensus 849 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~ 927 (1017)
+++++.+||+|||+|+........ .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYY------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCB------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred ECCCCCEEECCcccceeccCCCce------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999866433211 11223579999999999999999999999999999999999 89999764
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCH 1007 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1007 (1017)
... .+........ ..+.+.++++++.+++.+||+.||++||||+||+++|+.
T Consensus 252 ~~~--~~~~~i~~~~--------------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 252 SNQ--DVVEMIRNRQ--------------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CHH--HHHHHHHTTC--------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CHH--HHHHHHHcCC--------------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 221 1111110000 001123457789999999999999999999999999987
Q ss_pred cc
Q 043932 1008 TR 1009 (1017)
Q Consensus 1008 ~~ 1009 (1017)
..
T Consensus 304 ~~ 305 (308)
T 4gt4_A 304 WG 305 (308)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 25
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.6e-49 Score=480.95 Aligned_cols=516 Identities=18% Similarity=0.177 Sum_probs=349.9
Q ss_pred CCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEec
Q 043932 102 FLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVG 181 (1017)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1017)
++++|||++|+|++..|.+|.++++|++|+|++|+|++..|.+|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 56677777777765555566777777777777777765555666777777777777777765555666777777777777
Q ss_pred cccccCCCCccccCCCcccEEEEecCCCCC-CCCcccccccCcceeEeecCccccccchhhcccCcCc----EEeCCCcc
Q 043932 182 KNYLTGRLPDFVGNLSALEVFSITGNSLGG-KIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLE----RIYLPFNR 256 (1017)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~Ls~N~ 256 (1017)
+|++++..+..|+++++|++|+|++|.+++ ..|..++.+++|++|++++|+|++..+..+..+.+++ .++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 777766666666777777777777776654 3456666677777777777777666666665554433 56666666
Q ss_pred CccccCchhhccCCccceeeecccccCCC-CCCccccCCccceeecccCc------ccceeeccccccCccceEecccCc
Q 043932 257 FSGTLPFDIVVNLPNLKSLAIGGNNFFGS-IPDSLSNASNVEILDLGFNQ------FKGKVSIDFSSLKNLSWLNLEQNN 329 (1017)
Q Consensus 257 l~~~l~~~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~------l~~~~~~~~~~l~~L~~L~L~~N~ 329 (1017)
+. .++...+. ...++.+++.+|..... .+..+..+..++...+..+. +.......+..+..+....+..+.
T Consensus 213 l~-~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 213 MN-FIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CC-EECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cc-ccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 65 34444332 23455666666654322 22334445555554443222 222233344455555555554443
Q ss_pred CCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCC
Q 043932 330 LGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQL 409 (1017)
Q Consensus 330 l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 409 (1017)
....... ....+..+.+++.+++.+|.+....+. .....++.|++.+|.+....+. .+..|+.+++.+|.+
T Consensus 291 ~~~~~~~---~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~ 361 (635)
T 4g8a_A 291 LDYYLDG---IIDLFNCLTNVSSFSLVSVTIERVKDF---SYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKG 361 (635)
T ss_dssp CCSCEEE---CTTTTGGGTTCSEEEEESCEEEECGGG---GSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCS
T ss_pred hcccccc---hhhhhhhhccccccccccccccccccc---ccchhhhhhhcccccccCcCcc---cchhhhhcccccccC
Confidence 3221111 112244556677777777766543221 1223577777777777665443 345677778887776
Q ss_pred CCCcchhhcccccccceecccccccc--ccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccc
Q 043932 410 HGTIPDVIGELKNLQGLFLYKNVLQG--SIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQ 487 (1017)
Q Consensus 410 ~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 487 (1017)
... ..+..+++|+.|++++|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.+++++|......+.
T Consensus 362 ~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~ 438 (635)
T 4g8a_A 362 GNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEF 438 (635)
T ss_dssp CCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSS
T ss_pred CCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccc
Confidence 633 234567888888888887753 34555667778888888888877 4556677788888888888877766655
Q ss_pred hhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcc-cccccccccccccceEEeccCCccCCCCCccccccc
Q 043932 488 QLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQF-SGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLK 566 (1017)
Q Consensus 488 ~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 566 (1017)
..+.......++++++|.+.+..|..+..+++|+.|+|++|++ .+.+|..|..+++|++|||++|+|++++|.+|..++
T Consensus 439 ~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~ 518 (635)
T 4g8a_A 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 518 (635)
T ss_dssp CTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCC
Confidence 5444444455688888888888888888999999999999975 446788899999999999999999999999999999
Q ss_pred cCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCC-CCC-CCCCcccccCcccccCCcC
Q 043932 567 SIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTK-GVF-SSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 567 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~~~~ 631 (1017)
+|++|+|++|+|++..|..|.++++|++|||++|+|++.+|.. ..+ .+++.+++.+|||.|+|..
T Consensus 519 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 519 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp TCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999999999888888999999999999999999988863 334 6788899999999999875
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.9e-51 Score=437.12 Aligned_cols=252 Identities=21% Similarity=0.336 Sum_probs=209.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.++||+|+||+||+|++..+++.||||++... .....+.+.+|++++++++|||||++++++.+. +
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~-----~ 105 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD-----E 105 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 35799999999999999999999999999999999743 234457899999999999999999999998765 7
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||++||+|.+++++.+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 106 ~~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DF 176 (311)
T 4aw0_A 106 KLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF 176 (311)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEc
Confidence 7999999999999999998654 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+|+.+..... ......++||+.|||||++.+..|+.++||||+||++|||++|++||...... .........
T Consensus 177 Gla~~~~~~~~------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~ 249 (311)
T 4aw0_A 177 GTAKVLSPESK------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKL 249 (311)
T ss_dssp TTCEECCTTTT------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT
T ss_pred CCceecCCCCC------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcC
Confidence 99987653321 12233468999999999999999999999999999999999999999764221 111111111
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... .+...++++.+++.+||+.||++|||++|++.+
T Consensus 250 ~~~----------------------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 250 EYD----------------------------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCC----------------------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCC----------------------------CCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 000 001224568899999999999999999987544
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=470.78 Aligned_cols=465 Identities=20% Similarity=0.166 Sum_probs=301.9
Q ss_pred EEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccc
Q 043932 80 TRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNN 159 (1017)
Q Consensus 80 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (1017)
+.||+++|+++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 368999999985 555555 88999999999999877888999999999999999999888889999999999999999
Q ss_pred cccccCcccccccCCccEEEeccccccC-CCCccccCCCcccEEEEecCCCCCCCCcccccccCc--ceeEeecCcc--c
Q 043932 160 KLEGQIPAEIGSLLKLQTLAVGKNYLTG-RLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNL--VDLHVGGNQF--S 234 (1017)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~n~l--~ 234 (1017)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|++ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56666 78899999999999987 468889999999999999998875 456777777 8899999888 7
Q ss_pred cccchhhcccC-cCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeecc
Q 043932 235 GTFPQSICNIS-SLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSID 313 (1017)
Q Consensus 235 ~~~p~~l~~l~-~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~ 313 (1017)
+..|..+..+. ....+++++|.+.+.++...+..+++|+.|++++|.-.... ..+.+.++ .
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~-----------------~~~~~~~~-~ 215 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKC-----------------SYFLSILA-K 215 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTT-----------------HHHHHHHH-G
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccc-----------------ceeecchh-h
Confidence 77777777665 33456667777666555555555555555555555410000 00333222 3
Q ss_pred ccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHh--hcccceEEEecCCccccccCc
Q 043932 314 FSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIAN--LSSSMIEFRIGGNQIFGIIPS 391 (1017)
Q Consensus 314 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~~~L~~L~l~~N~i~~~~~~ 391 (1017)
|..+++|+.|++++|.+. +..+..+.. ...+|++|++++|++++.+|.
T Consensus 216 l~~l~~L~~L~l~~~~l~------------------------------~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~ 265 (520)
T 2z7x_B 216 LQTNPKLSNLTLNNIETT------------------------------WNSFIRILQLVWHTTVWYFSISNVKLQGQLDF 265 (520)
T ss_dssp GGGCTTCCEEEEEEEEEE------------------------------HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCC
T ss_pred hccccchhhccccccccC------------------------------HHHHHHHHHHhhhCcccEEEeecccccCcccc
Confidence 334444444444433332 111111110 012344555555555545555
Q ss_pred cc-----cccccccEEeccccCCCCCcchhhccc---ccccceeccccccccccCcccccccccceeeccCcccCCCCcc
Q 043932 392 GI-----RNLVNLIALGMQSNQLHGTIPDVIGEL---KNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPS 463 (1017)
Q Consensus 392 ~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~ 463 (1017)
.+ .++++|+.+++++|.+ ......+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|.
T Consensus 266 ~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~ 342 (520)
T 2z7x_B 266 RDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFE 342 (520)
T ss_dssp CCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTT
T ss_pred chhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhh
Confidence 55 7788888888888888 2333566655 67888888888886432 125778888888888888887888
Q ss_pred ccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccc-cccccc
Q 043932 464 SLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPV-TLSTCV 542 (1017)
Q Consensus 464 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~ 542 (1017)
.+.++++|+.|++++|++++ ++ .+|..+..+++|++|+|++|++++.+|. .+..++
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~-l~----------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKE-LS----------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCB-HH----------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhccCCCCCEEEccCCccCc-cc----------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 88888888888888888873 11 1233444555555555555555542332 245555
Q ss_pred cceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCCCCCCccccc
Q 043932 543 SLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQ 621 (1017)
Q Consensus 543 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~ 621 (1017)
+|+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|++++|++++.++. ...+.+++.+++.
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECc
Confidence 555555555555554444432 45555555555555 4454444555555555555555533332 3344455555555
Q ss_pred CcccccCCc
Q 043932 622 GNVKLCGGT 630 (1017)
Q Consensus 622 ~n~~~c~~~ 630 (1017)
+|++.|+|+
T Consensus 477 ~N~~~c~c~ 485 (520)
T 2z7x_B 477 TNPWDCSCP 485 (520)
T ss_dssp SSCBCCCHH
T ss_pred CCCCcccCC
Confidence 555555544
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.9e-50 Score=485.88 Aligned_cols=495 Identities=20% Similarity=0.239 Sum_probs=378.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCC----CCceee-EEECCC--CCeEEEEEcCCCCCccccCcccCCCCCCC
Q 043932 32 QTNETDRLALLAIKSQLHDTSGVTSSWNNTIN----LCQWTG-VTCGHR--HQRVTRLDLSNQRIGGILSPYVGNLSFLR 104 (1017)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~----~c~w~g-v~c~~~--~~~v~~l~l~~~~l~~~~~~~l~~l~~L~ 104 (1017)
...+++.+.-.++++-...-.+ .+|....+ .|.|.. ..|..- ...|+- . .-.+++
T Consensus 23 ~~~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-------------~---~~~~V~ 84 (636)
T 4eco_A 23 SRTAEYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-------------N---SNGRVT 84 (636)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTCCTTEEE-------------C---TTCCEE
T ss_pred hhhhhHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccCCCCeEE-------------c---CCCCEE
Confidence 3445666667777766555544 47874332 247952 112111 011221 0 114789
Q ss_pred EEEccCCCCCCCCCcccccccccccccCCCCcc------cc------cCCCcccCCCcceEeecccccccccCccccccc
Q 043932 105 YINLSDNSFHGEIPQEIGNLLRLEKLALPNNSF------SG------TIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSL 172 (1017)
Q Consensus 105 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l------~~------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 172 (1017)
.|+|++|+++|.+|.+|++|++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..+..+
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHH
Confidence 999999999999999999999999999999987 33 344433 66788 9999999999888877632
Q ss_pred -C------------------CccEEEec--cccccCCCCccccCCCcccEEEEecCCCCCC-----------------CC
Q 043932 173 -L------------------KLQTLAVG--KNYLTGRLPDFVGNLSALEVFSITGNSLGGK-----------------IP 214 (1017)
Q Consensus 173 -~------------------~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~~ 214 (1017)
. .++.+.+. .|+++| +|..++++++|++|+|++|.+++. +|
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip 240 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCc
Confidence 1 22222222 688988 899999999999999999999986 88
Q ss_pred cccc--cccCcceeEeecCccccccchhhcccCcCcEEeCCCcc-Ccc-ccCchhhc-----cCCccceeeecccccCCC
Q 043932 215 TTLG--LLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNR-FSG-TLPFDIVV-----NLPNLKSLAIGGNNFFGS 285 (1017)
Q Consensus 215 ~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~l~~~~~~-----~l~~L~~L~L~~n~l~~~ 285 (1017)
..++ ++++|++|+|++|++.+.+|..++++++|++|+|++|+ ++| .+|..+.. .+++|++|+|++|+++ .
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ 319 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-T 319 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-S
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-c
Confidence 9988 99999999999999999999999999999999999998 887 78866532 2388888888888888 7
Q ss_pred CCC--ccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccc
Q 043932 286 IPD--SLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGE 363 (1017)
Q Consensus 286 ~p~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 363 (1017)
+|. .++.+++|++|++++|+++|.+| .|..+++|++|+|+ +|+++
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~------------------------------~N~l~-- 366 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA------------------------------YNQIT-- 366 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC------------------------------SSEEE--
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC------------------------------CCccc--
Confidence 787 88888888888888888886666 55554444444444 44333
Q ss_pred cchhHHhhcccceEEEecCCccccccCcccccccc-ccEEeccccCCCCCcchhhcccc--cccceeccccccccccCcc
Q 043932 364 LPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVN-LIALGMQSNQLHGTIPDVIGELK--NLQGLFLYKNVLQGSIPSG 440 (1017)
Q Consensus 364 ~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~ 440 (1017)
.+|..+.++++ |++|++++|+++ .+|..+..++ +|++|++++|.+++.+|..
T Consensus 367 ------------------------~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 421 (636)
T 4eco_A 367 ------------------------EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421 (636)
T ss_dssp ------------------------ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCS
T ss_pred ------------------------cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhh
Confidence 23455667777 888888888887 6677776654 7888888888888888877
Q ss_pred cc-------cccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcccc
Q 043932 441 VG-------NLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQ 513 (1017)
Q Consensus 441 ~~-------~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~ 513 (1017)
|. .+++|++|+|++|+|+...+..+..+++|+.|++++|+++ .+|..++.. .+..
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~-----------------~~~~ 483 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKD-----------------ENEN 483 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEE-----------------TTEE
T ss_pred hcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcc-----------------cccc
Confidence 77 7778888888888888444444556888888888888887 555443221 1122
Q ss_pred ccccccceEEEccCCccccccccccc--ccccceEEeccCCccCCCCCccccccccCcEEec------cCCcccCCChhh
Q 043932 514 IGNLKNLVKLIISSNQFSGVIPVTLS--TCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNF------SSNNLSGQIPEF 585 (1017)
Q Consensus 514 ~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~ 585 (1017)
+.++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..
T Consensus 484 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~ 561 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEG 561 (636)
T ss_dssp CTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTT
T ss_pred ccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHH
Confidence 445679999999999999 6788886 99999999999999998 8999999999999999 568899999999
Q ss_pred hcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCC
Q 043932 586 LENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGG 629 (1017)
Q Consensus 586 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 629 (1017)
+.++++|++|+|++|++ +.+|.. ...+++.+++.+|+..|-.
T Consensus 562 l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 562 ITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp GGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred HhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 99999999999999999 677764 3488999999999988753
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.2e-50 Score=447.61 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=210.9
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
+.|++.++||+|+||+||+|+++.+|+.||||++........+.+.+|+.+|++++|||||++++++.+. +..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-----CEEEE
Confidence 5699999999999999999999999999999999877666667889999999999999999999999765 67999
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
|||||+||+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 226 VmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 99999999999999754 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCc
Q 043932 865 FLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPE 944 (1017)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 944 (1017)
.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|++||....... .+.. .....+.
T Consensus 296 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~-i~~~~~~ 365 (423)
T 4fie_A 296 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKM-IRDNLPP 365 (423)
T ss_dssp ECCSSC--------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHH-HHHSCCC
T ss_pred ECCCCC--------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHH-HHcCCCC
Confidence 764322 12234689999999999999999999999999999999999999997642211 1111 1111110
Q ss_pred hhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 945 KVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 945 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. .....+++++.+++.+||+.||++|||+.|+++|
T Consensus 366 ~~------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 RL------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CC------------------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 0011235678999999999999999999999886
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-49 Score=421.59 Aligned_cols=248 Identities=25% Similarity=0.373 Sum_probs=192.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+++.+|++++++++|||||++++++.+. +
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~-----~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-----D 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----C
Confidence 368999999999999999999999999999999997432 33456789999999999999999999998765 7
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+ +|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 789999999 679999998764 789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+|+...... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||...... ........
T Consensus 157 Gla~~~~~~~---------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~ 226 (275)
T 3hyh_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISN 226 (275)
T ss_dssp SCC------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred CCCeecCCCC---------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHc
Confidence 9998654322 1223679999999999998876 58999999999999999999999753211 00111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...+ .+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 227 ~~~~----------------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 227 GVYT----------------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TCCC----------------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCC----------------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0000 001235668899999999999999999999986
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-48 Score=478.14 Aligned_cols=461 Identities=19% Similarity=0.232 Sum_probs=363.7
Q ss_pred CCCCEEEccCCCCCCCCCcccccccccccccC-CCCcccccCCCcccCC----CcceEeec------------ccccccc
Q 043932 101 SFLRYINLSDNSFHGEIPQEIGNLLRLEKLAL-PNNSFSGTIPTNLSRC----SNLIQLRV------------SNNKLEG 163 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-~~n~l~~~~p~~l~~l----~~L~~L~L------------~~n~l~~ 163 (1017)
.+++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|-..... +.++...+ ....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999998855332211 10000000 0011111
Q ss_pred cC-----------cccccccCCccEEEecc--ccccCCCCccccCCCcccEEEEecCCCCC-----------------CC
Q 043932 164 QI-----------PAEIGSLLKLQTLAVGK--NYLTGRLPDFVGNLSALEVFSITGNSLGG-----------------KI 213 (1017)
Q Consensus 164 ~~-----------p~~~~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 213 (1017)
.+ +........++.+.++. |++++ +|..|+++++|+.|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 11 11112333455555554 89998 89999999999999999999998 38
Q ss_pred Ccccc--cccCcceeEeecCccccccchhhcccCcCcEEeCCCcc-Ccc-ccCchhh------ccCCccceeeecccccC
Q 043932 214 PTTLG--LLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNR-FSG-TLPFDIV------VNLPNLKSLAIGGNNFF 283 (1017)
Q Consensus 214 ~~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~l~~~~~------~~l~~L~~L~L~~n~l~ 283 (1017)
|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+. ..+++|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99987 99999999999999999999999999999999999998 988 7886542 24459999999999999
Q ss_pred CCCCC--ccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCc-ccEEeccCccc
Q 043932 284 GSIPD--SLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSS-LKILSLAANQF 360 (1017)
Q Consensus 284 ~~~p~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l 360 (1017)
.+|. .++.+++|+.|+|++|+++ .+| .|..+++|+.|+|++|++...+ ..+.++++ |+.|+|++|++
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp-------~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP-------EDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC-------TTSCEECTTCCEEECCSSCC
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch-------HHHhhccccCCEEECcCCCC
Confidence 8898 9999999999999999999 666 8999999999999999997433 33778888 99999999998
Q ss_pred ccccchhHHhhcccceEEEecCCccccccCcccccc--ccccEEeccccCCCCCcchhh---c--ccccccceecccccc
Q 043932 361 VGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNL--VNLIALGMQSNQLHGTIPDVI---G--ELKNLQGLFLYKNVL 433 (1017)
Q Consensus 361 ~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l 433 (1017)
+ .+|. .+..+ ++|+.|+|++|++.+.+|... . .+++|+.|+|++|++
T Consensus 632 ~-~lp~-------------------------~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L 685 (876)
T 4ecn_A 632 K-YIPN-------------------------IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEI 685 (876)
T ss_dssp C-SCCS-------------------------CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCC
T ss_pred C-cCch-------------------------hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcC
Confidence 7 4443 33333 348888888888887665332 2 345899999999999
Q ss_pred ccccCccc-ccccccceeeccCcccCCCCcccccc--------ccCCceeecCCCcccCCccchhhhcccccceeccCCC
Q 043932 434 QGSIPSGV-GNLTKLAKLVMSYNSLQGNIPSSLGN--------CQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNN 504 (1017)
Q Consensus 434 ~~~~p~~~-~~l~~L~~L~Ls~N~i~~~~p~~~~~--------l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N 504 (1017)
+ .+|..+ ..+++|++|+|++|+|+ .+|..+.. +++|+.|+|++|+++
T Consensus 686 ~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~---------------------- 741 (876)
T 4ecn_A 686 Q-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT---------------------- 741 (876)
T ss_dssp C-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC----------------------
T ss_pred C-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc----------------------
Confidence 9 566654 58999999999999999 56665443 237888888888776
Q ss_pred cCCCCcccccc--ccccceEEEccCCcccccccccccccccceEEeccC------CccCCCCCccccccccCcEEeccCC
Q 043932 505 NLNGSLPLQIG--NLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISS------NSFHGVIPHSLGFLKSIKVLNFSSN 576 (1017)
Q Consensus 505 ~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (1017)
.+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|
T Consensus 742 ----~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N 816 (876)
T 4ecn_A 742 ----SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSN 816 (876)
T ss_dssp ----CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSS
T ss_pred ----cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCC
Confidence 4556665 88999999999999997 798999999999999976 8899999999999999999999999
Q ss_pred cccCCChhhhcccCCCcEEEcccCCCcCcCCCC-CCCCCCCcccccCcccc--cCCc
Q 043932 577 NLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTK-GVFSSKTKLSLQGNVKL--CGGT 630 (1017)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~--c~~~ 630 (1017)
++ +.+|..+. ++|+.|||++|++....+.. ..........+.+|+.. |||+
T Consensus 817 ~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 817 DI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp CC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred CC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 99 68898876 69999999999998654431 11122344556666554 4766
No 32
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.8e-49 Score=437.19 Aligned_cols=275 Identities=23% Similarity=0.314 Sum_probs=217.6
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCC-----cEEEEEEEeeecCc-chHHHHHHHHHHHHhcCC-CCceeeee
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGED-----EMIVAVKVINLKQK-GAFKSFMAECKALRNIRH-RNLIKIIT 769 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~ 769 (1017)
..+++...++|++.++||+|+||+||+|++... ++.||||++..... ...+.+.+|++++++++| ||||++++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 345566678999999999999999999997543 47899999975433 345679999999999965 89999999
Q ss_pred eeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCcee
Q 043932 770 ICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVH 839 (1017)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 839 (1017)
+|... .+..++|||||++|+|.++++..... .....+++.++..++.|||+||+|||++ +|||
T Consensus 136 ~~~~~----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiH 208 (353)
T 4ase_A 136 ACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 208 (353)
T ss_dssp EECCT----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEEec----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ceec
Confidence 98643 14579999999999999999865321 1124589999999999999999999999 9999
Q ss_pred ecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh
Q 043932 840 GDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT 919 (1017)
Q Consensus 840 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt 919 (1017)
|||||+|||+++++.+||+|||+|+........ .......||+.|||||++.+..|+.++|||||||++|||+|
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t 282 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCCc------eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHh
Confidence 999999999999999999999999866432211 11223578999999999999999999999999999999998
Q ss_pred -CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 043932 920 -GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM 998 (1017)
Q Consensus 920 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 998 (1017)
|+.||........ +.......... ..+..+++++.+++.+||+.||++|||+
T Consensus 283 ~G~~Pf~~~~~~~~-~~~~i~~g~~~--------------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~ 335 (353)
T 4ase_A 283 LGASPYPGVKIDEE-FCRRLKEGTRM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTF 335 (353)
T ss_dssp TSCCSSTTCCCSHH-HHHHHHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCCCCCHHHH-HHHHHHcCCCC--------------------------CCCccCCHHHHHHHHHHcCcChhHCcCH
Confidence 9999976432211 11111110000 0112346678999999999999999999
Q ss_pred HHHHHHHhhcccc
Q 043932 999 RDVVAKLCHTRET 1011 (1017)
Q Consensus 999 ~evl~~L~~~~~~ 1011 (1017)
.||+++|+.+.+.
T Consensus 336 ~eil~~L~~llq~ 348 (353)
T 4ase_A 336 SELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-48 Score=425.11 Aligned_cols=275 Identities=24% Similarity=0.301 Sum_probs=204.8
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
++|.+.++||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++++|...+. .....|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEEE
Confidence 5688899999999999999998 4889999998644322 1223456666678899999999999976422 2246799
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhC-----CCCCceeecCCCCceEeCCCCCeEEee
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHH-----CQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
||||+++|+|.++++.. .+++.++.+++.|++.||+|||++ ..++||||||||+|||++.++.+||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999764 589999999999999999999976 245899999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCC------CcCccccchhHHHHHHHHHhCCCCCCcccccC--
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS------EASMTGDVYSFGILLLELFTGRRPTDAAFTEG-- 931 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~pf~~~~~~~-- 931 (1017)
||+|+......... ........||+.|||||++.+. .++.++|||||||++|||+||++||.......
T Consensus 152 FGla~~~~~~~~~~----~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 152 LGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CTTCEEEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred CCCCccccCCCCce----eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 99998764332111 1112235799999999998764 46789999999999999999998875432211
Q ss_pred --------ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 043932 932 --------LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVA 1003 (1017)
Q Consensus 932 --------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1003 (1017)
.............. .+|.. .......++++.+.+++.+||+.||++||||.||++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~----~rp~~-------------p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQK----LRPNI-------------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC----CCCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred chhcccccchHHHHHHHHhccc----CCCCC-------------CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 11111111111100 00000 001112356778999999999999999999999999
Q ss_pred HHhhcccc
Q 043932 1004 KLCHTRET 1011 (1017)
Q Consensus 1004 ~L~~~~~~ 1011 (1017)
.|+.+.+.
T Consensus 291 ~L~~l~~~ 298 (303)
T 3hmm_A 291 TLSQLSQQ 298 (303)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99998764
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.1e-48 Score=421.76 Aligned_cols=265 Identities=24% Similarity=0.397 Sum_probs=195.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCC------
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDS------ 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 776 (1017)
.++|++.+.||+|+||+||+|+++.+++.||||+++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 4579999999999999999999999999999999976543 345678999999999999999999999865432
Q ss_pred -CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCe
Q 043932 777 -KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 777 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
....+.|+||||+++|+|.+++..... ....++..++.++.||++||+|||++ +||||||||+|||++.++.+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCT---IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCS---GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCC---CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 123457999999999999999986542 12456677889999999999999999 99999999999999999999
Q ss_pred EEeecccccccccccccccc----cCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccC
Q 043932 856 HVGDFGLAKFLSSHQLDTAS----KTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEG 931 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~ 931 (1017)
||+|||+|+........... .........+||+.|||||++.+..|+.++||||+||++|||++ ||.......
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~ 234 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH
Confidence 99999999877543321111 11122334679999999999999999999999999999999996 775432110
Q ss_pred ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 932 LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........... +....+..+...+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~---------------------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 RTLTDVRNLKF---------------------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHTTCC---------------------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCC---------------------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00000000000 11122334556789999999999999999999985
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.3e-49 Score=423.19 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=197.0
Q ss_pred ccccccCcccccCCceEEEEEeC---CCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 705 SEFASSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++.+.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE----- 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET-----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 57999999999999999999874 467899999997432 22335688999999999999999999999765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||||++||+|.+++.+.+ .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 77999999999999999998654 789999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||+||++||.+..... .......
T Consensus 170 FGla~~~~~~~--------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~ 240 (304)
T 3ubd_A 170 FGLSKESIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILK 240 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cccceeccCCC--------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHc
Confidence 99998653321 11234679999999999999999999999999999999999999997642211 1111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM-----RDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 1004 (1017)
...+ .+..+++++.+++.+||+.||++|||+ +|+++|
T Consensus 241 ~~~~----------------------------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 241 AKLG----------------------------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CCCC----------------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCCC----------------------------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0000 011235678899999999999999985 677765
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.8e-46 Score=446.32 Aligned_cols=465 Identities=18% Similarity=0.125 Sum_probs=308.3
Q ss_pred EEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccc
Q 043932 80 TRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNN 159 (1017)
Q Consensus 80 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (1017)
..+|++++++++ +|..+. ++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999997 455454 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCcccccccCCccEEEeccccccCC-CCccccCCCcccEEEEecCCCCCCCCcccccccCc--ceeEeecCcc--c
Q 043932 160 KLEGQIPAEIGSLLKLQTLAVGKNYLTGR-LPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNL--VDLHVGGNQF--S 234 (1017)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~n~l--~ 234 (1017)
+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|++++. .+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 999 66766 899999999999999873 468999999999999999999763 45555555 9999999998 7
Q ss_pred cccchhhcccC-cCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeecc
Q 043932 235 GTFPQSICNIS-SLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSID 313 (1017)
Q Consensus 235 ~~~p~~l~~l~-~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~ 313 (1017)
+..|..+..+. ..-.++++.|.+.+.++...+..+++|+.|++++|+.... .+.+. ...
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~-------------------~l~~~-~~~ 244 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ-------------------RLMTF-LSE 244 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH-------------------HHHHH-HHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc-------------------hHHHH-HHH
Confidence 77887777654 1224566777766555555555555555555555531100 01111 112
Q ss_pred ccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccc
Q 043932 314 FSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGI 393 (1017)
Q Consensus 314 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~ 393 (1017)
|..+++|+.|+++++.+. +|.+.+ ++..+. ..++++|++++|.+++.+|..+
T Consensus 245 l~~l~~L~~L~L~~~~l~-------------------------~~~~~~-~~~~~~--~~~L~~L~l~~n~l~~~ip~~~ 296 (562)
T 3a79_B 245 LTRGPTLLNVTLQHIETT-------------------------WKCSVK-LFQFFW--PRPVEYLNIYNLTITERIDREE 296 (562)
T ss_dssp HHSCSSCEEEEEEEEEEC-------------------------HHHHHH-HHHHHT--TSSEEEEEEEEEEECSCCCCCC
T ss_pred HhccCcceEEEecCCcCc-------------------------HHHHHH-HHHhhh--cccccEEEEeccEeeccccchh
Confidence 333444444444433321 111110 111111 1245556666666655555555
Q ss_pred -----cccccccEEeccccCCCCCcchhhccc---ccccceeccccccccccCcccccccccceeeccCcccCCCCcccc
Q 043932 394 -----RNLVNLIALGMQSNQLHGTIPDVIGEL---KNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSL 465 (1017)
Q Consensus 394 -----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~ 465 (1017)
.+++.|+.++++.|.+ ......+..+ .+|++|++++|.+.... ....+++|++|++++|++++.+|..+
T Consensus 297 ~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~ 373 (562)
T 3a79_B 297 FTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGC 373 (562)
T ss_dssp CCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred hhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhh
Confidence 6777788888888877 2332444433 56888888888876322 12677888888888888888888888
Q ss_pred ccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccccc-ccccccccc
Q 043932 466 GNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIP-VTLSTCVSL 544 (1017)
Q Consensus 466 ~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L 544 (1017)
.++++|+.|++++|++++ ++ .+|..+..+++|++|+|++|++++.+| ..+..+++|
T Consensus 374 ~~l~~L~~L~L~~N~l~~-~~----------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKN-FF----------------------KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CSCSSCCEEECCSSCCCB-TT----------------------HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred cccCCCCEEECCCCCcCC-cc----------------------cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 888888888888888873 11 123345555666666666666665233 335556666
Q ss_pred eEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCc
Q 043932 545 EYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGN 623 (1017)
Q Consensus 545 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n 623 (1017)
+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|++++.++. ...+.+++.+++.+|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCC
Confidence 6666666666555444433 45666666666665 4555455666666666666666643333 344555556666666
Q ss_pred ccccCCc
Q 043932 624 VKLCGGT 630 (1017)
Q Consensus 624 ~~~c~~~ 630 (1017)
||.|+|+
T Consensus 508 ~~~c~c~ 514 (562)
T 3a79_B 508 PWDCTCP 514 (562)
T ss_dssp CBCCCHH
T ss_pred CcCCCcc
Confidence 6666554
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-46 Score=448.14 Aligned_cols=437 Identities=21% Similarity=0.253 Sum_probs=302.1
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57999999999999988889999999999999999999888999999999999999999999 67776 8999999999
Q ss_pred ccccccc-cCcccccccCCccEEEeccccccCCCCccccCCCcc--cEEEEecCCC--CCCCCccccccc-CcceeEeec
Q 043932 157 SNNKLEG-QIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSAL--EVFSITGNSL--GGKIPTTLGLLR-NLVDLHVGG 230 (1017)
Q Consensus 157 ~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~l~~l~-~L~~L~L~~ 230 (1017)
++|++++ .+|..|+++++|++|++++|++++ ..++.+++| +.|++++|.+ ++..|..+..+. +...+++++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999997 578999999999999999999986 567888888 9999999999 888898888876 455678899
Q ss_pred Cccccccc-hhhcccCcCcEEeCCCcc-------CccccCchhhccCCccceeeecccccCCCCCCccc---cCCcccee
Q 043932 231 NQFSGTFP-QSICNISSLERIYLPFNR-------FSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLS---NASNVEIL 299 (1017)
Q Consensus 231 n~l~~~~p-~~l~~l~~L~~L~Ls~N~-------l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~---~l~~L~~L 299 (1017)
|++.+.++ ..+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~--~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA--KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH--GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh--hhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 99887655 467889999999999997 665555 456788999999998888754322221 23578888
Q ss_pred ecccCcccceeeccc-----cccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccc-hhHHhhc-
Q 043932 300 DLGFNQFKGKVSIDF-----SSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELP-HSIANLS- 372 (1017)
Q Consensus 300 ~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~- 372 (1017)
++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+.
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--------------------------------~~p~~~~~~~~~ 300 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--------------------------------GFPQSYIYEIFS 300 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--------------------------------CSCTHHHHHHHH
T ss_pred EeecccccCccccchhhcccccCceeEeccccccce--------------------------------ecchhhhhcccc
Confidence 888888887777666 5555555555555544 222 2222221
Q ss_pred -ccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceee
Q 043932 373 -SSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLV 451 (1017)
Q Consensus 373 -~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 451 (1017)
.+++.|++++|.+.... .+..+++|++|++++|++++ .+|..++++++|++|+
T Consensus 301 ~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~------------------------~~~~~~~~l~~L~~L~ 354 (520)
T 2z7x_B 301 NMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTD------------------------TVFENCGHLTELETLI 354 (520)
T ss_dssp TCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCT------------------------TTTTTCCCCSSCCEEE
T ss_pred cCceeEEEcCCCcccccc--chhhCCcccEEEeECCccCh------------------------hhhhhhccCCCCCEEE
Confidence 12333333333332211 11344444445555444444 4444445555555555
Q ss_pred ccCcccCC--CCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCc
Q 043932 452 MSYNSLQG--NIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQ 529 (1017)
Q Consensus 452 Ls~N~i~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 529 (1017)
+++|+|++ .+|..+..+++|+.|++++|++++.+|. ..+..+++|++|+|++|+
T Consensus 355 L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~------------------------~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 355 LQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK------------------------GDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG------------------------CSCCCCTTCCEEECCSSC
T ss_pred ccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc------------------------chhccCccCCEEECcCCC
Confidence 55555543 2344455555555555555555521221 123445556666666666
Q ss_pred ccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChh-hhcccCCCcEEEcccCCCcCcCC
Q 043932 530 FSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPE-FLENLSFLEFLNFSHNDLEGEVP 607 (1017)
Q Consensus 530 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~ 607 (1017)
+++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|++++ +|. .+..+++|++|++++|++++.++
T Consensus 411 l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 411 LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 6555554443 56666666666666 455555566666666666666663 343 36666677777777777766555
No 38
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=424.31 Aligned_cols=286 Identities=21% Similarity=0.233 Sum_probs=210.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCC-CCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSID-SKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 780 (1017)
.++|++.++||+|+||+||+|++..+|+.||||+++.... ...+++.+|+++|++++|||||++++++.... ....+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 3579999999999999999999999999999999964432 33467889999999999999999999886542 12346
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||++ |+|.+++...+ .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeec
Confidence 7899999996 58999997654 799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+|+.+...... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+....+ .+..+..
T Consensus 203 Gla~~~~~~~~~----~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~ 277 (398)
T 4b99_A 203 GMARGLCTSPAE----HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMM 277 (398)
T ss_dssp TTCBCC-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHH
T ss_pred ceeeecccCccc----cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHH
Confidence 999876432211 11223347899999999998875 46999999999999999999999998643221 2222222
Q ss_pred hhcCc--hhhhhccchhhHHHHhhc-chhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPE--KVIEIVDPLLLIEVMANN-SMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~--~~~~~~d~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..... .............+.... ..............++++.+++.+||+.||++|||+.|+++|
T Consensus 278 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 278 VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 22111 111111110000100000 000000111122335678899999999999999999999886
No 39
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.8e-46 Score=412.56 Aligned_cols=286 Identities=20% Similarity=0.257 Sum_probs=206.1
Q ss_pred HHHhhccccccCcccccCCceEEEEEeC---CCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSID 775 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1017)
+....++|++.++||+|+||+||+|+++ .+++.||+|++.... ...++.+|+++++.+ +||||+++++++.+.
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~- 92 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN- 92 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET-
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC-
Confidence 3445678999999999999999999874 467899999986443 335678999999998 699999999998765
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC-CC
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD-MV 854 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 854 (1017)
++.|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ ||+||||||+|||++.+ +.
T Consensus 93 ----~~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~ 156 (361)
T 4f9c_A 93 ----DHVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKK 156 (361)
T ss_dssp ----TEEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTE
T ss_pred ----CEEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCe
Confidence 78999999999999999984 478999999999999999999999 99999999999999877 89
Q ss_pred eEEeecccccccccccccccc--------------------cCCCcccccccCccccCcccccCC-CcCccccchhHHHH
Q 043932 855 SHVGDFGLAKFLSSHQLDTAS--------------------KTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGIL 913 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~--------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~i 913 (1017)
+||+|||+|+........... .........+||+.|+|||++.+. .|+.++||||+||+
T Consensus 157 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~i 236 (361)
T 4f9c_A 157 YALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236 (361)
T ss_dssp EEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred EEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHH
Confidence 999999999866433211100 011122345799999999999875 58999999999999
Q ss_pred HHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhc---c----------chhhHHHHhhcch-------hHHH-----
Q 043932 914 LLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIV---D----------PLLLIEVMANNSM-------IQED----- 968 (1017)
Q Consensus 914 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---d----------~~l~~~~~~~~~~-------~~~~----- 968 (1017)
+|||++|+.||.....+...+................ . ............. ....
T Consensus 237 l~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 316 (361)
T 4f9c_A 237 FLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHA 316 (361)
T ss_dssp HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------------
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccc
Confidence 9999999999976544333333332221111100000 0 0000000000000 0000
Q ss_pred -hHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 969 -IRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 969 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........+++..+++.+||+.||++|||++|+++|
T Consensus 317 ~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 317 TNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp -----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 001112345678899999999999999999999876
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.7e-45 Score=401.82 Aligned_cols=293 Identities=30% Similarity=0.488 Sum_probs=274.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc--eeeEEECCCC--CeEEEEEcCCCCCcc--ccCcccCCCCCCCE
Q 043932 32 QTNETDRLALLAIKSQLHDTSGVTSSWNNTINLCQ--WTGVTCGHRH--QRVTRLDLSNQRIGG--ILSPYVGNLSFLRY 105 (1017)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~ 105 (1017)
.|.++|++||++||+++.||. .+++|+.+.+||. |.||+|+..+ ++|+.|+|+++++++ .+++.++++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 489999999999999999887 7899988889998 9999998655 899999999999999 89999999999999
Q ss_pred EEccC-CCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEecccc
Q 043932 106 INLSD-NSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNY 184 (1017)
Q Consensus 106 L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 184 (1017)
|+|++ |.+++.+|.+|+++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++++++|++|++++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccCCC-cccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCc
Q 043932 185 LTGRLPDFVGNLS-ALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPF 263 (1017)
Q Consensus 185 l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~ 263 (1017)
+++.+|..+++++ +|+.|++++|++++.+|..+..++ |++|++++|++++..|..+..+++|++|+|++|.+++.+|.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc
Confidence 9999999999998 999999999999999999999997 99999999999999999999999999999999999876665
Q ss_pred hhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCc
Q 043932 264 DIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNN 329 (1017)
Q Consensus 264 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 329 (1017)
+..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|.
T Consensus 240 --~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 240 --VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp --CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred --ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 567899999999999999999999999999999999999999888875 777788888777776
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.7e-44 Score=419.61 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=201.4
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHH---HHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSF---MAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++|++.++||+|+||+||+|+++.+|+.||||++.... ....... ..++.+++.++|||||++++++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~--- 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--- 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS---
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC---
Confidence 357999999999999999999999999999999997432 1222233 3446667778999999999999765
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
+..|+||||++||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||
T Consensus 265 --~~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 265 --DKLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred --CEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 78999999999999999998654 789999999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
+|||+|+.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||........ .+
T Consensus 334 ~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~ 401 (689)
T 3v5w_A 334 SDLGLACDFSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE 401 (689)
T ss_dssp CCCTTCEECSSCC----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HH
T ss_pred cccceeeecCCCC----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HH
Confidence 9999998764322 223689999999999964 5799999999999999999999999976433221 11
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME-----MRDVVAK 1004 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 1004 (1017)
......... ...+...++++.+++.+||+.||.+|++ +.||++|
T Consensus 402 i~~~i~~~~------------------------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 402 IDRMTLTMA------------------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHCC------------------------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHhhcCCC------------------------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111100000 0001123566889999999999999998 6888765
No 42
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.7e-43 Score=428.47 Aligned_cols=528 Identities=21% Similarity=0.203 Sum_probs=440.1
Q ss_pred CCcee----eEEECCCC---------CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccc
Q 043932 64 LCQWT----GVTCGHRH---------QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKL 130 (1017)
Q Consensus 64 ~c~w~----gv~c~~~~---------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 130 (1017)
+|.|. .|.|.+.. ..++.|||++|.|++..+.+|.++++|++|||++|+|++..|.+|+++++|++|
T Consensus 26 ~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L 105 (635)
T 4g8a_A 26 PCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL 105 (635)
T ss_dssp CSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEE
Confidence 46543 47896432 368999999999999988999999999999999999997778889999999999
Q ss_pred cCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccC-CCCccccCCCcccEEEEecCCC
Q 043932 131 ALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTG-RLPDFVGNLSALEVFSITGNSL 209 (1017)
Q Consensus 131 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l 209 (1017)
+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|++++|++
T Consensus 106 ~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 106 ILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp ECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred EccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 999999997767789999999999999999998877889999999999999999986 4688899999999999999999
Q ss_pred CCCCCcccccccCcc----eeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeeccccc---
Q 043932 210 GGKIPTTLGLLRNLV----DLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNF--- 282 (1017)
Q Consensus 210 ~~~~~~~l~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l--- 282 (1017)
++..+..|..+.+++ .++++.|.++...+..+ ....++.++++.|.....++...+..+..++...+..+..
T Consensus 186 ~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~ 264 (635)
T 4g8a_A 186 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 264 (635)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTS
T ss_pred cccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccc
Confidence 998899988877654 68899999986555544 4456788999999877666667777888888777755433
Q ss_pred ---CCCCCCccccCCccceeecccCcccc---eeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEecc
Q 043932 283 ---FGSIPDSLSNASNVEILDLGFNQFKG---KVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLA 356 (1017)
Q Consensus 283 ---~~~~p~~l~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls 356 (1017)
.......+.....+...++..+.... .....+..+.+++.+.+.+|.+.... .+.....|+.|+++
T Consensus 265 ~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~~~~~L~~L~l~ 336 (635)
T 4g8a_A 265 GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--------DFSYNFGWQHLELV 336 (635)
T ss_dssp CCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--------GGGSCCCCSEEEEE
T ss_pred cccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--------ccccchhhhhhhcc
Confidence 23344456666677777766655432 23345677888999999988875432 24566789999999
Q ss_pred CcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCC--Ccchhhcccccccceeccccccc
Q 043932 357 ANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHG--TIPDVIGELKNLQGLFLYKNVLQ 434 (1017)
Q Consensus 357 ~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~ 434 (1017)
+|.+.+..+.. ...++.+.+.+|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.
T Consensus 337 ~~~~~~~~~~~----l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~ 410 (635)
T 4g8a_A 337 NCKFGQFPTLK----LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI 410 (635)
T ss_dssp SCEESSCCCCB----CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE
T ss_pred cccccCcCccc----chhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc
Confidence 99987544432 24688899999988754 345679999999999999864 45677788999999999999998
Q ss_pred cccCcccccccccceeeccCcccCCCCc-cccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCC-CCccc
Q 043932 435 GSIPSGVGNLTKLAKLVMSYNSLQGNIP-SSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLN-GSLPL 512 (1017)
Q Consensus 435 ~~~p~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~-~~~p~ 512 (1017)
..+..+..+++|+.++++.|++....+ ..|..+++++.+++++|++.+..|..+.....+ +.|+|++|.+. +..|.
T Consensus 411 -~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L-~~L~Ls~N~~~~~~~~~ 488 (635)
T 4g8a_A 411 -TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPD 488 (635)
T ss_dssp -EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECS
T ss_pred -cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh-hhhhhhhcccccccCch
Confidence 456678899999999999988776554 567899999999999999997766666655555 56999999754 45788
Q ss_pred cccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhccc-CC
Q 043932 513 QIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENL-SF 591 (1017)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~ 591 (1017)
.|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..|..+++|++|||++|+|++.+|..+..+ ++
T Consensus 489 ~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~ 568 (635)
T 4g8a_A 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568 (635)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTT
T ss_pred hhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999998 68
Q ss_pred CcEEEcccCCCcCcCCC
Q 043932 592 LEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 592 L~~L~l~~N~l~~~~~~ 608 (1017)
|++|+|++|+|.+.+..
T Consensus 569 L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 569 LAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CCEEECTTCCBCCSGGG
T ss_pred CCEEEeeCCCCcccCCc
Confidence 99999999999998764
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.1e-43 Score=423.35 Aligned_cols=439 Identities=20% Similarity=0.227 Sum_probs=290.7
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
..++.|+|++|.+++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999998899999999999999999999888999999999999999999999 78877 8999999999
Q ss_pred ccccccc-cCcccccccCCccEEEeccccccCCCCccccCCCcc--cEEEEecCCC--CCCCCccccccc-CcceeEeec
Q 043932 157 SNNKLEG-QIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSAL--EVFSITGNSL--GGKIPTTLGLLR-NLVDLHVGG 230 (1017)
Q Consensus 157 ~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~l~~l~-~L~~L~L~~ 230 (1017)
++|++++ .+|..|+++++|++|++++|++++. .+.++++| +.|++++|.+ ++..|..+..+. ..-.+++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999997 4578999999999999999999863 45566666 9999999999 889999988765 223668899
Q ss_pred Cccccccch-hhcccCcCcEEeCCCccC-----ccccCchhhccCCccceeeecccccCCCC----CCccccCCccceee
Q 043932 231 NQFSGTFPQ-SICNISSLERIYLPFNRF-----SGTLPFDIVVNLPNLKSLAIGGNNFFGSI----PDSLSNASNVEILD 300 (1017)
Q Consensus 231 n~l~~~~p~-~l~~l~~L~~L~Ls~N~l-----~~~l~~~~~~~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~ 300 (1017)
|.+.+.++. .+..+++|+.|++++|+. .+.+ ..+..+++|+.|+++++.+.+.. +..+ ..++|++|+
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~--~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL--SELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH--HHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHH--HHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 998876554 567889999999999862 2222 23567788888888888776421 1111 234788888
Q ss_pred cccCcccceeeccc-----cccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccc-hhHHhhccc
Q 043932 301 LGFNQFKGKVSIDF-----SSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELP-HSIANLSSS 374 (1017)
Q Consensus 301 Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~ 374 (1017)
+++|++++.+|..+ ..++.|+.+++.. |.+ .+| ..+......
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~------------------------------~~~--~~p~~~~~~~~~~ 330 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKN------------------------------QVF--LFSKEALYSVFAE 330 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEE------------------------------CCC--SSCHHHHHHHHHT
T ss_pred EeccEeeccccchhhhcccccchheehhhccc------------------------------cee--ecChhhhhhhhcc
Confidence 88888887666655 3344444444333 333 222 222221110
Q ss_pred ceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccC
Q 043932 375 MIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSY 454 (1017)
Q Consensus 375 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (1017)
.+|+.|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|+|++
T Consensus 331 ----------------------~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 386 (562)
T 3a79_B 331 ----------------------MNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQR 386 (562)
T ss_dssp ----------------------CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCS
T ss_pred ----------------------CcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCC
Confidence 12333444444332111 013444455555555555544455555555555555555
Q ss_pred cccCCC--CccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccc
Q 043932 455 NSLQGN--IPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSG 532 (1017)
Q Consensus 455 N~i~~~--~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 532 (1017)
|++++. +|..+.++++|+.|++++|++++.+|. ..+..+++|++|+|++|++++
T Consensus 387 N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~ 442 (562)
T 3a79_B 387 NGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD------------------------RTCAWAESILVLNLSSNMLTG 442 (562)
T ss_dssp SCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS------------------------CCCCCCTTCCEEECCSSCCCG
T ss_pred CCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh------------------------hhhcCcccCCEEECCCCCCCc
Confidence 555532 234455556666655555555522221 123445556666666666655
Q ss_pred cccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhh-hcccCCCcEEEcccCCCcCcCCC
Q 043932 533 VIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEF-LENLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 533 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++ +|.. +..+++|+.|++++|+++|.+|.
T Consensus 443 ~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 443 SVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred chhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 5444433 45666666666666 344444466666666666666663 3333 66666666666666666665553
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.6e-44 Score=424.24 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=210.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||++++++.+. +..|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD-----NEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS-----SEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEE
Confidence 46899999999999999999999999999999999866655667889999999999999999999998765 7899
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC--CCeEEeecc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD--MVSHVGDFG 861 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfG 861 (1017)
+||||++||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 99999999999999975432 689999999999999999999999 99999999999999854 899999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|++||.+..... .+.......
T Consensus 303 ~a~~~~~~~---------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~ 372 (573)
T 3uto_A 303 LTAHLDPKQ---------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCD 372 (573)
T ss_dssp SCEECCTTS---------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTC
T ss_pred ceeEccCCC---------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCC
Confidence 998765322 1223579999999999999999999999999999999999999997643221 111111110
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... . ......+++++.+++.+||+.||.+|||+.|+++|
T Consensus 373 ~~~------~------------------~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 373 WNM------D------------------DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CCC------C------------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCC------C------------------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0 00111235667899999999999999999999986
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-42 Score=404.55 Aligned_cols=397 Identities=18% Similarity=0.173 Sum_probs=244.4
Q ss_pred CEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccC-cccccccCCccEEEecc
Q 043932 104 RYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQI-PAEIGSLLKLQTLAVGK 182 (1017)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 182 (1017)
+.++.++++++ .+|. +. ++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 35666666666 4554 22 55666666666666555666666666666666666665433 33455555555555555
Q ss_pred ccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccC
Q 043932 183 NYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLP 262 (1017)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~ 262 (1017)
|++++..|..|+++++|++|+|++|.+++..+.. ..+..+++|++|+|++|++++..|
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------~~~~~l~~L~~L~L~~n~l~~~~~ 146 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------NFFKPLTSLEMLVLRDNNIKKIQP 146 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS----------------------STTTTCTTCCEEECCSSBCCSCCC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCc----------------------ccccCcccCCEEECCCCccCccCc
Confidence 5555544555555555555555554444322222 114455555555555555554434
Q ss_pred chhhccCCccceeeecccccCCCCCCccccC--CccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhh
Q 043932 263 FDIVVNLPNLKSLAIGGNNFFGSIPDSLSNA--SNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDF 340 (1017)
Q Consensus 263 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (1017)
..++.++++|++|++++|++++..|..+..+ .+|+.|++++|.+.+..+..+.. ..
T Consensus 147 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------------~~ 204 (455)
T 3v47_A 147 ASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------------EK 204 (455)
T ss_dssp CGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------------HH
T ss_pred ccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc----------------------cc
Confidence 4444555555555555555555555555544 45666666666655433322110 01
Q ss_pred HhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhccc
Q 043932 341 VTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGEL 420 (1017)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 420 (1017)
...+..+++|++|++++|++.+..|..+.... ...+|+.|++++|.+.+..
T Consensus 205 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~----------------------~~~~L~~L~l~~~~~~~~~------- 255 (455)
T 3v47_A 205 CGNPFKNTSITTLDLSGNGFKESMAKRFFDAI----------------------AGTKIQSLILSNSYNMGSS------- 255 (455)
T ss_dssp HCCTTTTCEEEEEECTTSCCCHHHHHHHHHHT----------------------TTCCEEEEECTTCTTTSCC-------
T ss_pred cccccccceeeeEecCCCcccccchhhhhccc----------------------cccceeeEeeccccccccc-------
Confidence 11123456677777777777766666655442 1134555555555443221
Q ss_pred ccccceeccccccccccCcccccc--cccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccce
Q 043932 421 KNLQGLFLYKNVLQGSIPSGVGNL--TKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVY 498 (1017)
Q Consensus 421 ~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~ 498 (1017)
+..+.+.+..+..+..+ ++|++|++++|++++..|..|..+++|+.|++++|+++
T Consensus 256 -------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~---------------- 312 (455)
T 3v47_A 256 -------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN---------------- 312 (455)
T ss_dssp -------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC----------------
T ss_pred -------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccc----------------
Confidence 11122222222223322 56777777777777777777777777777777777766
Q ss_pred eccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcc
Q 043932 499 LDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNL 578 (1017)
Q Consensus 499 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 578 (1017)
+..|..|.++++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 313 ---------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 313 ---------KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp ---------EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ---------ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcc
Confidence 34455677788888888888888877788888888888999998888888888888889999999999998
Q ss_pred cCCChhhhcccCCCcEEEcccCCCcCcCCCC
Q 043932 579 SGQIPEFLENLSFLEFLNFSHNDLEGEVPTK 609 (1017)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 609 (1017)
++..+..+..+++|+.|++++|++++.+|..
T Consensus 384 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 384 KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 8777777788889999999999999888854
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.3e-43 Score=404.12 Aligned_cols=422 Identities=23% Similarity=0.291 Sum_probs=218.3
Q ss_pred cccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCC
Q 043932 95 PYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLK 174 (1017)
Q Consensus 95 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 174 (1017)
+.-...++|++|++++|.+ |.+|++|+++++|++|++++|.++|.+|..++++++|++++++.|.. .+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~ 72 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQ 72 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HT
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cC
Confidence 3444568899999999999 79999999999999999999999999999999999987777766643 35
Q ss_pred ccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCC
Q 043932 175 LQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPF 254 (1017)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 254 (1017)
|++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++
T Consensus 73 l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~ 140 (454)
T 1jl5_A 73 AHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSN 140 (454)
T ss_dssp CSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCS
T ss_pred CCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcC
Confidence 6777777777774 3332 2567777777777765 4432 3566777777776663 2221 14666666666
Q ss_pred ccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCC
Q 043932 255 NRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGT 334 (1017)
Q Consensus 255 N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 334 (1017)
|++++ +| + +.++++|++|++++|++++ +|..+ .+|++|++++|++++. | .|..+++|++|++++|+++..+
T Consensus 141 n~l~~-lp-~-~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l~ 211 (454)
T 1jl5_A 141 NQLEK-LP-E-LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKLP 211 (454)
T ss_dssp SCCSS-CC-C-CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCC
T ss_pred CCCCC-Cc-c-cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcCC
Confidence 66663 55 2 5566666666666666663 44332 3666666666666653 2 3555555555555555554321
Q ss_pred CCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcc
Q 043932 335 ANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIP 414 (1017)
Q Consensus 335 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 414 (1017)
.. ..+|++|++++|.++. +| .+..+++|++|++++|++++ +|
T Consensus 212 -------------------------------~~----~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l~ 253 (454)
T 1jl5_A 212 -------------------------------DL----PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKT-LP 253 (454)
T ss_dssp -------------------------------CC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CC
T ss_pred -------------------------------CC----cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCc-cc
Confidence 10 1234555555555542 33 36667777777777777764 33
Q ss_pred hhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhccc
Q 043932 415 DVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITT 494 (1017)
Q Consensus 415 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 494 (1017)
+. +++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++ ++. ...
T Consensus 254 ~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~----~~~ 317 (454)
T 1jl5_A 254 DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCD----LPP 317 (454)
T ss_dssp SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECC----CCT
T ss_pred cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccC----CcC
Confidence 32 3667777777777774 4443 3667777777777764 2211 1567777777777763 221 122
Q ss_pred ccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCC--CCCccccccccCcEEe
Q 043932 495 LSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHG--VIPHSLGFLKSIKVLN 572 (1017)
Q Consensus 495 ~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 572 (1017)
.+++|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|+|++|++++ .+|.+++.
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~-------- 381 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED-------- 381 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------
Confidence 33457777777765 5543 4677888888888874 554 46778888888888887 56665543
Q ss_pred ccCCcccCCChhhhcccCCCcEEEcccCCCcC--cCCCCCCCCCCCcccccCccccc
Q 043932 573 FSSNNLSGQIPEFLENLSFLEFLNFSHNDLEG--EVPTKGVFSSKTKLSLQGNVKLC 627 (1017)
Q Consensus 573 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~~~~~~~~~~n~~~c 627 (1017)
|+.|++.|.+|.. +++|+.|++++|++++ .+|. ++..+.+.+|...|
T Consensus 382 L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 382 LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVD 430 (454)
T ss_dssp EECCC----------------------------------------------------
T ss_pred hhhcccccccccc---cCcCCEEECCCCcCCccccchh-----hHhheeCcCcccCC
Confidence 2346666667663 4678888999999887 5553 45566666665444
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-41 Score=397.90 Aligned_cols=396 Identities=18% Similarity=0.190 Sum_probs=291.1
Q ss_pred CCCceee--EEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCccccc
Q 043932 63 NLCQWTG--VTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGT 140 (1017)
Q Consensus 63 ~~c~w~g--v~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 140 (1017)
..|.|.+ |.|++ ++++.. |. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.
T Consensus 6 ~~c~~~~~~~~c~~------------~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 6 SECSVIGYNAICIN------------RGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp -CCEEETTEEECCS------------SCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ceeEEEccccCcCC------------CCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 4577766 77743 445443 32 2 27899999999999988899999999999999999999866
Q ss_pred C-CCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCcc--ccCCCcccEEEEecCCCCCCCCcc-
Q 043932 141 I-PTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDF--VGNLSALEVFSITGNSLGGKIPTT- 216 (1017)
Q Consensus 141 ~-p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~~- 216 (1017)
+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|.. |+++++|++|+|++|.+++..|..
T Consensus 70 i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 149 (455)
T 3v47_A 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGG
T ss_pred ECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccc
Confidence 6 567999999999999999999899999999999999999999999865544 999999999999999999887876
Q ss_pred cccccCcceeEeecCccccccchhhccc--CcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCC
Q 043932 217 LGLLRNLVDLHVGGNQFSGTFPQSICNI--SSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNAS 294 (1017)
Q Consensus 217 l~~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 294 (1017)
+..+++|++|++++|++++..|..+..+ .+|+.|++++|.+.+ ++...+. ......+..++
T Consensus 150 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~-~~~~~~~----------------~~~~~~~~~~~ 212 (455)
T 3v47_A 150 FLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQD-MNEYWLG----------------WEKCGNPFKNT 212 (455)
T ss_dssp GGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTT-CSTTCTT----------------HHHHCCTTTTC
T ss_pred cCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccc-cchhhcc----------------ccccccccccc
Confidence 8899999999999999998888888776 677788888887763 2221110 01112234556
Q ss_pred ccceeecccCcccceeecccccc---CccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhh
Q 043932 295 NVEILDLGFNQFKGKVSIDFSSL---KNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANL 371 (1017)
Q Consensus 295 ~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 371 (1017)
+|+.|++++|++++..+..+..+ ++|+.|++++|. +.+..
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~------------------------------~~~~~------- 255 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY------------------------------NMGSS------- 255 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT------------------------------TTSCC-------
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeecccc------------------------------ccccc-------
Confidence 77777777777776666554332 344444444443 22110
Q ss_pred cccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceee
Q 043932 372 SSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLV 451 (1017)
Q Consensus 372 ~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 451 (1017)
+..+.+....+..+..+ ..++|+.|++++|.+++.+|..|.++++|++|+
T Consensus 256 --------~~~~~~~~~~~~~~~~~----------------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 305 (455)
T 3v47_A 256 --------FGHTNFKDPDNFTFKGL----------------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLT 305 (455)
T ss_dssp --------TTCCSSCCCCTTTTGGG----------------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred --------cchhhhccCcccccccc----------------------cccCceEEEecCccccccchhhcccCCCCCEEE
Confidence 00111111111111111 124566666666666666666666777777777
Q ss_pred ccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccc
Q 043932 452 MSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFS 531 (1017)
Q Consensus 452 Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 531 (1017)
|++|++++..|..|.++++|+.|++++|+++ +..|..|..+++|++|+|++|+++
T Consensus 306 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~ 360 (455)
T 3v47_A 306 LAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-------------------------SIDSRMFENLDKLEVLDLSYNHIR 360 (455)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCC-------------------------EECGGGGTTCTTCCEEECCSSCCC
T ss_pred CCCCcccccChhHhcCcccCCEEECCCCccC-------------------------CcChhHhcCcccCCEEECCCCccc
Confidence 7777777666667777777777777777765 234556677888888999999988
Q ss_pred ccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCCh
Q 043932 532 GVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIP 583 (1017)
Q Consensus 532 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 583 (1017)
+..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 361 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 361 ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8888889999999999999999998777888999999999999999998887
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.5e-42 Score=397.47 Aligned_cols=399 Identities=21% Similarity=0.262 Sum_probs=253.1
Q ss_pred cccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEE
Q 043932 123 NLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVF 202 (1017)
Q Consensus 123 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (1017)
+.++|++|++++|.+ |.+|..++++++|++|++++|.++|.+|..++++++|+.+++..|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 468899999999999 68999999999999999999999999999999988888888877753 467888
Q ss_pred EEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeeccccc
Q 043932 203 SITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNF 282 (1017)
Q Consensus 203 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l 282 (1017)
++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|+++ .+|. ..++|++|++++|++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~----~~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSD----LPPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCS----CCTTCCEEECCSSCC
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccC----CCCCCCEEECcCCCC
Confidence 888888875 3331 3678888888888875 5543 367788888888776 3332 125677777777777
Q ss_pred CCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCccccc
Q 043932 283 FGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVG 362 (1017)
Q Consensus 283 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 362 (1017)
++ +| .++.+++|++|++++|++++. |.. ..+|++|++++|++...+ .+.++++
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~------------- 196 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEELP--------ELQNLPF------------- 196 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC--------CCTTCTT-------------
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcCc--------cccCCCC-------------
Confidence 74 55 477777777777777777652 221 235555555555554321 1233344
Q ss_pred ccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccc
Q 043932 363 ELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVG 442 (1017)
Q Consensus 363 ~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 442 (1017)
|++|++++|++++ +|... .+|++|++++|+++ .+| .++.+++|++|++++|++++ +|..
T Consensus 197 ------------L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~-- 255 (454)
T 1jl5_A 197 ------------LTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL-- 255 (454)
T ss_dssp ------------CCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--
T ss_pred ------------CCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--
Confidence 5555555555554 23322 58999999999998 566 48999999999999999985 5543
Q ss_pred cccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcccccccc-ccce
Q 043932 443 NLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNL-KNLV 521 (1017)
Q Consensus 443 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l-~~L~ 521 (1017)
+++|++|++++|++++ +|.. +++|+.|++++|++++ +|. .....++|++++|.+++ ++ .+ ++|+
T Consensus 256 -~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~ 320 (454)
T 1jl5_A 256 -PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRS-LC----DLPPSLE 320 (454)
T ss_dssp -CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSE-EC----CCCTTCC
T ss_pred -ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCc-cc----CCcCcCC
Confidence 4789999999999995 5654 4789999999999985 221 11334579999999985 33 23 5899
Q ss_pred EEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccC--CChhhhcccCCCcEEEccc
Q 043932 522 KLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSG--QIPEFLENLSFLEFLNFSH 599 (1017)
Q Consensus 522 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~ 599 (1017)
+|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|++|+|++|++++ .+|..+.+ ++.
T Consensus 321 ~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~ 384 (454)
T 1jl5_A 321 ELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRM 384 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EEC
T ss_pred EEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhh
Confidence 99999999996 5544 5889999999999995 565 47899999999999998 67776543 456
Q ss_pred CCCcCcCCCCCCCCCCCcccccCccccc
Q 043932 600 NDLEGEVPTKGVFSSKTKLSLQGNVKLC 627 (1017)
Q Consensus 600 N~l~~~~~~~~~~~~~~~~~~~~n~~~c 627 (1017)
|.+.|.+|.. +.+++.+++.+|+...
T Consensus 385 n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 385 NSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp CC--------------------------
T ss_pred cccccccccc--cCcCCEEECCCCcCCc
Confidence 8888888873 5789999999997654
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.2e-42 Score=374.13 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=209.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|+.++++++||||+++++++... +..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-----CEEE
Confidence 46899999999999999999999999999999999876666667889999999999999999999998765 6789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLA 863 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 863 (1017)
+||||+++|+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 94 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999999999764 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcC
Q 043932 864 KFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALP 943 (1017)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~ 943 (1017)
........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .........+
T Consensus 164 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 234 (297)
T 3fxz_A 164 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 234 (297)
T ss_dssp EECCSTTC--------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSC
T ss_pred eecCCccc--------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC
Confidence 86543221 12235799999999999999999999999999999999999999975422111 1111100000
Q ss_pred chhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 944 EKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 944 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
. . .....+++.+.+++.+||+.||++|||+.|++++-
T Consensus 235 ~----~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 235 E----L---------------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp C----C---------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred C----C---------------------CCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 0 0 00112356688999999999999999999998763
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.3e-42 Score=379.17 Aligned_cols=285 Identities=32% Similarity=0.506 Sum_probs=225.7
Q ss_pred cCHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 695 VSYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 695 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
+++.++...+++|++.+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 344456667889999999999999999999975 6889999998876666678899999999999999999999998654
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
+..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 108 -----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 108 -----NEMILIYKYMENGNLKRHLYGSDL--PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp -----TCCEEEEECCTTCBTGGGSSSSCC--CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred -----CeEEEEEEcCCCCcHHHHHhccCC--CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 568999999999999999876432 223689999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccC-cc
Q 043932 855 SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEG-LT 933 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~-~~ 933 (1017)
+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 178 ~kl~Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~ 251 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQ------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251 (321)
T ss_dssp EEECCCTTCEECSSSSC------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC
T ss_pred EEEeecccccccccccc------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH
Confidence 99999999986532221 111223468999999999988899999999999999999999999997654332 22
Q ss_pred HHHHHHhh-cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 934 LHEFAKIA-LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 934 ~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
...+.... ........+++... .....+++..+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 252 LAEWAVESHNNGQLEQIVDPNLA--------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHHTHHHHTTTCCCSSSSSSCT--------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhhhccccccHHHhcChhhc--------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 22221111 11111122222110 11234567889999999999999999999999999998865
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=375.64 Aligned_cols=268 Identities=24% Similarity=0.380 Sum_probs=218.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.++||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++... +..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----CeeE
Confidence 46899999999999999999999999999999998766666678899999999999999999999998765 6789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLA 863 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 863 (1017)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999987543 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccc------cCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc----
Q 043932 864 KFLSSHQLDTAS------KTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT---- 933 (1017)
Q Consensus 864 ~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~---- 933 (1017)
+........... ..........||+.|+|||++.+..++.++||||||+++|||++|..||.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 235 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN 235 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence 876543321110 0011112457999999999999999999999999999999999999998754322111
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccc
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFF 1013 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1013 (1017)
....... .....+++.+.+++.+||+.||++|||+.|+++.|+.+++...
T Consensus 236 ~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 236 VRGFLDR------------------------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp HHHHHHH------------------------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhccccc------------------------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1110000 0112345678899999999999999999999999999987654
Q ss_pred c
Q 043932 1014 G 1014 (1017)
Q Consensus 1014 ~ 1014 (1017)
+
T Consensus 286 ~ 286 (310)
T 3s95_A 286 G 286 (310)
T ss_dssp H
T ss_pred C
Confidence 3
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-41 Score=377.80 Aligned_cols=290 Identities=35% Similarity=0.601 Sum_probs=229.6
Q ss_pred CCCCCcCHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeee
Q 043932 690 KQFPTVSYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKII 768 (1017)
Q Consensus 690 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 768 (1017)
.....+++.++....++|++.+.||+|+||+||+|++. +++.||||++..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 34556888999999999999999999999999999865 688999999875432 2234788999999999999999999
Q ss_pred eeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceE
Q 043932 769 TICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 848 (1017)
+++... +..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+++.++|+||||||+||+
T Consensus 94 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil 166 (326)
T 3uim_A 94 GFCMTP-----TERLLVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166 (326)
T ss_dssp EEECCS-----SCCEEEEECCTTCBHHHHHHCCST--TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred EEEecC-----CceEEEEEeccCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence 998654 567899999999999999987543 2345899999999999999999999987778999999999999
Q ss_pred eCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 849 LDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 849 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||+...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (326)
T 3uim_A 167 LDEEFEAVVGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239 (326)
T ss_dssp ECTTCCEEECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHH
T ss_pred ECCCCCEEeccCccccccCcccc-------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccc
Confidence 99999999999999986643221 11223469999999999988889999999999999999999999997432
Q ss_pred ---ccCccHHHHHHhhcCch-hhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 929 ---TEGLTLHEFAKIALPEK-VIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 929 ---~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........+........ .....+.... .....++++.+.+++.+||+.||.+|||+.||+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 305 (326)
T 3uim_A 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQ--------------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305 (326)
T ss_dssp HTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT--------------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred cccccchhHHHHHHHHhhchhhhhhcChhhc--------------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence 22233333433322221 2222222111 11234567889999999999999999999999999
Q ss_pred Hhhc
Q 043932 1005 LCHT 1008 (1017)
Q Consensus 1005 L~~~ 1008 (1017)
|+..
T Consensus 306 L~~~ 309 (326)
T 3uim_A 306 LEGD 309 (326)
T ss_dssp HHTS
T ss_pred hcCc
Confidence 9764
No 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-41 Score=376.39 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=207.4
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
....++|++.+.||+|+||.||+|++..+|+.||||++.... ....+++.+|+++++.++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~---- 86 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE---- 86 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC----
Confidence 344678999999999999999999999999999999997543 33456788999999999999999999998654
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..|+||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 -~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~ 156 (328)
T 3fe3_A 87 -KTLYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIA 156 (328)
T ss_dssp -SEEEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred -CEEEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEe
Confidence 67899999999999999997653 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcC-ccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEAS-MTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|||++....... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||...... ..
T Consensus 157 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~ 222 (328)
T 3fe3_A 157 DFGFSNEFTVGG---------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-----EL 222 (328)
T ss_dssp STTCCGGGSSSC---------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH
T ss_pred eccCceecCCCC---------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-----HH
Confidence 999997654321 12335799999999999887764 8999999999999999999999764221 11
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........ .. .+..+++.+.+++.+||+.||.+|||+.|+++|
T Consensus 223 ~~~i~~~~-----------------~~-------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 223 RERVLRGK-----------------YR-------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHCC-----------------CC-------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHhCC-----------------CC-------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11000000 00 001124567899999999999999999999886
No 54
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-41 Score=373.19 Aligned_cols=283 Identities=25% Similarity=0.393 Sum_probs=213.6
Q ss_pred hccccccCcccccCCceEEEEE----eCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.+.||+|+||+||+|+ +..+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 4689999999999999999999 56689999999998666666678999999999999999999999985432 2
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 457999999999999999987642 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++......... ........+|..|+|||++.+..++.++||||+|+++|||++|..||...... +..
T Consensus 158 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~------~~~ 226 (295)
T 3ugc_A 158 FGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMR 226 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH------HHH
T ss_pred CcccccccCCcce-----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH------HHh
Confidence 9999876433211 11112245788899999999889999999999999999999999998653211 111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1014 (1017)
....................... .......+++++.+++.+||+.||++|||+.|+++.|+.+++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~g 295 (295)
T 3ugc_A 227 MIGNDKQGQMIVFHLIELLKNNG------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295 (295)
T ss_dssp HHCTTCCTHHHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred hhcCccccchhHHHHHHHHhccC------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhccC
Confidence 00000000000000000000000 0111234567899999999999999999999999999999887643
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=377.25 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=200.4
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
...++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~ 81 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA-----N 81 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----C
Confidence 44678999999999999999999999999999999997543 23346788999999999999999999998665 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 82 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DF 152 (347)
T 3zgw_A 82 KIFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDF 152 (347)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEec
Confidence 7899999999999999997653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|++........ .......||+.|+|||++.+..+ +.++||||+||++|||++|..||....... .......
T Consensus 153 G~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~ 224 (347)
T 3zgw_A 153 GLCAKPKGNKD-------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMR 224 (347)
T ss_dssp TTCBC---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cCcccccCCCC-------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHc
Confidence 99875542211 11223579999999999988775 899999999999999999999997632110 0111110
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
.... ....+++.+.+++.+||+.||++|||+.|++++-.
T Consensus 225 ~~~~----------------------------~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 225 GKYD----------------------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp TCCC----------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred CCCC----------------------------CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 0000 00112456788999999999999999999998643
No 56
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.3e-41 Score=374.11 Aligned_cols=288 Identities=23% Similarity=0.285 Sum_probs=212.8
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.-..++|++.++||+|+||+||+|++. ++.||||++..... ......+|+.++++++||||+++++++..... ...
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~ 95 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDV 95 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSE
T ss_pred ccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCc
Confidence 344679999999999999999999985 78999999975433 23455678999999999999999999876422 134
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhC-------CCCCceeecCCCCceEeCCCC
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHH-------CQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
..++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+. +.++|+||||||+||+++.++
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~ 168 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL 168 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred eEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence 579999999999999999764 589999999999999999999976 133899999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccC-----CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-----SEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 ~~kL~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 169 TACIADFGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp CEEECCCTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred eEEEccCCcccccccccC------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 999999999987653321 111223579999999999976 356778999999999999999999997654
Q ss_pred ccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhc
Q 043932 929 TEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHT 1008 (1017)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 1008 (1017)
..............+. ..++.+ ...................+++++.+++.+||+.||++|||+.||++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 243 DEYMLPFEEEIGQHPS-LEDMQE-----VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp CCCCCTTHHHHCSSCC-HHHHHH-----HHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chhccchhhhhccCCc-hhhhhh-----hhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3321111000000000 000000 0000000000000011224567799999999999999999999999999998
Q ss_pred ccc
Q 043932 1009 RET 1011 (1017)
Q Consensus 1009 ~~~ 1011 (1017)
.+.
T Consensus 317 ~~~ 319 (322)
T 3soc_A 317 QRL 319 (322)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 57
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.6e-41 Score=374.59 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=208.1
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc------hHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
..++|++.+.||+|+||+||+|++..+|+.||+|++...... ..+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-- 87 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR-- 87 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC--
Confidence 356899999999999999999999999999999999754322 346789999999999999999999998654
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC---
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--- 853 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 853 (1017)
+..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 88 ---~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~ 155 (361)
T 2yab_A 88 ---TDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPI 155 (361)
T ss_dssp ---SEEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSS
T ss_pred ---CEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCc
Confidence 67899999999999999997653 689999999999999999999999 999999999999998877
Q ss_pred -CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc
Q 043932 854 -VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL 932 (1017)
Q Consensus 854 -~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~ 932 (1017)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.......
T Consensus 156 ~~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~- 225 (361)
T 2yab_A 156 PHIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE- 225 (361)
T ss_dssp CCEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-
T ss_pred cCEEEEecCCceEcCCCC---------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 79999999998664321 1123579999999999999899999999999999999999999997642211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
........... .+ ......+++.+.+++.+||..||.+|||+.|+++|-
T Consensus 226 ~~~~i~~~~~~------~~------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 226 TLANITAVSYD------FD------------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp HHHHHHTTCCC------CC------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHHhcCCC------CC------------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11111110000 00 011123356789999999999999999999998753
No 58
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-41 Score=370.71 Aligned_cols=255 Identities=19% Similarity=0.265 Sum_probs=208.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+++++.++||||+++++++... +..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESM-----EELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-----CEEE
Confidence 468999999999999999999999999999999987443 3346788999999999999999999998765 6789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC--CCCeEEeecc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH--DMVSHVGDFG 861 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG 861 (1017)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA-----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 9999999999999997653 2689999999999999999999999 9999999999999987 7899999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||....... .........
T Consensus 150 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~ 219 (321)
T 1tki_A 150 QARQLKPGD---------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAE 219 (321)
T ss_dssp TCEECCTTC---------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTC
T ss_pred CCeECCCCC---------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCC
Confidence 998764322 1123568999999999999889999999999999999999999997642211 111111110
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
... + ......+++++.+++.+||..||.+|||+.|+++|-.
T Consensus 220 ~~~------~------------------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 220 YTF------D------------------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp CCC------C------------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred CCC------C------------------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 000 0 0112234667899999999999999999999998643
No 59
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.7e-40 Score=362.78 Aligned_cols=285 Identities=29% Similarity=0.462 Sum_probs=223.7
Q ss_pred CCCCcCHHHHHHhhcccccc------CcccccCCceEEEEEeCCCcEEEEEEEeeecC----cchHHHHHHHHHHHHhcC
Q 043932 691 QFPTVSYAELSKATSEFASS------NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----KGAFKSFMAECKALRNIR 760 (1017)
Q Consensus 691 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~ 760 (1017)
....+++.++..++++|... +.||+|+||.||+|++ +++.||+|++.... ....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678899999999988877 8999999999999997 57789999986432 234577899999999999
Q ss_pred CCCceeeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceee
Q 043932 761 HRNLIKIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHG 840 (1017)
Q Consensus 761 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 840 (1017)
||||+++++++... +..++||||+++++|.+++.... ....+++..++.++.|++.||+|||++ +|+||
T Consensus 89 h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~ 157 (307)
T 2nru_A 89 HENLVELLGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLD---GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHR 157 (307)
T ss_dssp CTTBCCEEEEECSS-----SSCEEEEECCTTCBHHHHHHTGG---GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeEEEEEEEecC-----CceEEEEEecCCCcHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence 99999999998654 56899999999999999997543 123689999999999999999999999 99999
Q ss_pred cCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhC
Q 043932 841 DLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTG 920 (1017)
Q Consensus 841 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg 920 (1017)
||||+||+++.++.+||+|||++......... .......||+.|+|||++.+ .++.++||||||+++|+|++|
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g 230 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQT------VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSSC------EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHEEEcCCCcEEEeeccccccccccccc------ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC
Confidence 99999999999999999999999865432211 11123568999999998876 588999999999999999999
Q ss_pred CCCCCcccccCccHHHHHHh--hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 043932 921 RRPTDAAFTEGLTLHEFAKI--ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM 998 (1017)
Q Consensus 921 ~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 998 (1017)
+.||......... ..+... .....+.+.+++.. ......+++.+.+++.+||+.||.+|||+
T Consensus 231 ~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 294 (307)
T 2nru_A 231 LPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKM---------------NDADSTSVEAMYSVASQCLHEKKNKRPDI 294 (307)
T ss_dssp CCSBCTTBSSSBT-THHHHHHHTTSCCHHHHSCSSC---------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred CCCcccCcchHHH-HHHHHHhhhhhhhhhhhccccc---------------cccchHHHHHHHHHHHHHcCCCcccCcCH
Confidence 9999865433221 111111 11111222222111 11234557789999999999999999999
Q ss_pred HHHHHHHhhcccc
Q 043932 999 RDVVAKLCHTRET 1011 (1017)
Q Consensus 999 ~evl~~L~~~~~~ 1011 (1017)
.|++++|+++.++
T Consensus 295 ~~l~~~L~~l~~s 307 (307)
T 2nru_A 295 KKVQQLLQEMTAS 307 (307)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998764
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-40 Score=367.41 Aligned_cols=266 Identities=22% Similarity=0.315 Sum_probs=215.1
Q ss_pred CCcCHHHHHHhhcc----------ccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCC
Q 043932 693 PTVSYAELSKATSE----------FASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHR 762 (1017)
Q Consensus 693 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 762 (1017)
+.++++++..+++. |...++||+|+||.||+|++..+|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677777766653 77778999999999999999989999999999876666678899999999999999
Q ss_pred CceeeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecC
Q 043932 763 NLIKIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDL 842 (1017)
Q Consensus 763 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 842 (1017)
||+++++++... +..++||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||
T Consensus 103 niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 103 NVVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp TBCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred CcceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 999999998765 6789999999999999998643 589999999999999999999999 9999999
Q ss_pred CCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCC
Q 043932 843 KPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRR 922 (1017)
Q Consensus 843 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~ 922 (1017)
||+||+++.++.+||+|||++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 239 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKDV--------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccCc--------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998654321 11123579999999999999899999999999999999999999
Q ss_pred CCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 043932 923 PTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV 1002 (1017)
Q Consensus 923 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1002 (1017)
||....... ....... ..+ +.. .....+++.+.+++.+||+.||++|||+.|++
T Consensus 240 pf~~~~~~~-~~~~~~~-~~~--------~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 293 (321)
T 2c30_A 240 PYFSDSPVQ-AMKRLRD-SPP--------PKL----------------KNSHKVSPVLRDFLERMLVRDPQERATAQELL 293 (321)
T ss_dssp TTTTSCHHH-HHHHHHH-SSC--------CCC----------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCHHH-HHHHHhc-CCC--------CCc----------------CccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 997532210 0111100 000 000 00112355688999999999999999999999
Q ss_pred HHHhh
Q 043932 1003 AKLCH 1007 (1017)
Q Consensus 1003 ~~L~~ 1007 (1017)
++-.-
T Consensus 294 ~hp~~ 298 (321)
T 2c30_A 294 DHPFL 298 (321)
T ss_dssp TSGGG
T ss_pred cChhh
Confidence 87543
No 61
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.8e-41 Score=370.67 Aligned_cols=269 Identities=26% Similarity=0.363 Sum_probs=204.5
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
..++....++|++.+.||+|+||+||+|++ +++.||||++.... ....+++.+|++++++++||||+++++++...
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 334445567899999999999999999988 47889999987543 23346788999999999999999999998654
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHD 852 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~ 852 (1017)
+..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ + |+||||||+||+++.+
T Consensus 107 -----~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~ 175 (309)
T 3p86_A 107 -----PNLSIVTEYLSRGSLYRLLHKSG---AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKK 175 (309)
T ss_dssp -----TCCEEEEECCTTCBHHHHHHSTT---HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTT
T ss_pred -----CceEEEEecCCCCcHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCC
Confidence 56899999999999999998653 123489999999999999999999999 8 9999999999999999
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL 932 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~ 932 (1017)
+.+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 176 ~~~kL~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~- 246 (309)
T 3p86_A 176 YTVKVCDFGLSRLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ- 246 (309)
T ss_dssp CCEEECCCC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH-
T ss_pred CcEEECCCCCCccccccc--------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999999999997543221 11123568999999999999999999999999999999999999997542211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
........... ......+++++.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 247 -~~~~~~~~~~~-------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 247 -VVAAVGFKCKR-------------------------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp -HHHHHHHSCCC-------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred -HHHHHHhcCCC-------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 00000000000 0011123567899999999999999999999999999987764
Q ss_pred c
Q 043932 1013 F 1013 (1017)
Q Consensus 1013 ~ 1013 (1017)
.
T Consensus 301 ~ 301 (309)
T 3p86_A 301 V 301 (309)
T ss_dssp -
T ss_pred C
Confidence 4
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=373.21 Aligned_cols=267 Identities=25% Similarity=0.386 Sum_probs=210.7
Q ss_pred hccccccCcccccCCceEEEEEeCCC---cEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.++||+|+||+||+|++..+ +..||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG----- 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 46899999999999999999999754 4569999997542 33456789999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++|+|.++++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 668999999999999999976542 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .....
T Consensus 195 fg~a~~~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~ 267 (325)
T 3kul_A 195 FGLSRVLEDDPDAAY-----TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSV 267 (325)
T ss_dssp CSSCEECC----CCE-----ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHH
T ss_pred CCcccccccCcccee-----eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH
Confidence 999987654321111 1112346889999999998899999999999999999999 999996542211 00000
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccccC
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFGRR 1016 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 1016 (1017)
..... ......+++.+.+++.+||+.||++|||+.||++.|+.+.+...+-|
T Consensus 268 ~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~ 319 (325)
T 3kul_A 268 EEGYR--------------------------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLR 319 (325)
T ss_dssp HTTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC---
T ss_pred HcCCC--------------------------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccc
Confidence 00000 00111345678999999999999999999999999999987655443
No 63
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-40 Score=364.10 Aligned_cols=269 Identities=22% Similarity=0.349 Sum_probs=208.0
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHh--cCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRN--IRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.+.||+|+||+||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++... .....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCc
Confidence 356899999999999999999998 5889999998643 23455667777766 7999999999987553 22236
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeecCCCCceEeCCC
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDHD 852 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~ 852 (1017)
..++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~ 149 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKN 149 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTT
T ss_pred eeEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCC
Confidence 689999999999999999643 6899999999999999999999 77 99999999999999999
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC------CcCccccchhHHHHHHHHHhC------
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS------EASMTGDVYSFGILLLELFTG------ 920 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg------ 920 (1017)
+.+||+|||+|+.......... .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 150 ~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 150 GQCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp SCEEECCCTTCEEEETTTTEEE----CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred CCEEEeeCCCeeeccccccccc----ccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 9999999999976543321111 111234799999999999876 456799999999999999999
Q ss_pred ----CCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC
Q 043932 921 ----RRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM 996 (1017)
Q Consensus 921 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 996 (1017)
+.||............................ ......+++.+.+++.+||+.||++||
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~Rp 288 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN-----------------RWFSDPTLTSLAKLMKECWYQNPSARL 288 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-----------------GGGGSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccccccCCCCcchhhhhHHHhccCCCCCCCh-----------------hhccCccHHHHHHHHHHHhhcChhhCC
Confidence 88887654444444333332211110000000 111234577899999999999999999
Q ss_pred CHHHHHHHHhhc
Q 043932 997 EMRDVVAKLCHT 1008 (1017)
Q Consensus 997 s~~evl~~L~~~ 1008 (1017)
|+.||++.|+++
T Consensus 289 s~~~i~~~L~~i 300 (301)
T 3q4u_A 289 TALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHhcc
Confidence 999999999875
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.9e-40 Score=368.40 Aligned_cols=251 Identities=24% Similarity=0.302 Sum_probs=206.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++... +
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----D 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-----C
Confidence 46899999999999999999999999999999999754 234457788999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 7899999999999999997653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 150 G~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~ 216 (337)
T 1o6l_A 150 GLCKEGISDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFEL 216 (337)
T ss_dssp TTCBCSCCTT--------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH
T ss_pred cchhhcccCC--------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-----HHHHH
Confidence 9997532211 1123367999999999999999999999999999999999999999753221 11100
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAKL 1005 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 1005 (1017)
..... .. ....+++++.+++.+||+.||++|| ++.|+++|-
T Consensus 217 i~~~~-----------------~~-------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 217 ILMEE-----------------IR-------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHCC-----------------CC-------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHcCC-----------------CC-------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 00000 00 0012356788999999999999999 899998863
No 65
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-40 Score=375.97 Aligned_cols=266 Identities=24% Similarity=0.397 Sum_probs=212.7
Q ss_pred hccccccCcccccCCceEEEEEeC-------CCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeeeeeeecC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILG-------EDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKIITICSSI 774 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1017)
.++|++.+.||+|+||+||+|++. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999863 3567899999975432 3456789999999999 899999999998654
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 844 (1017)
+..|+||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 160 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 -----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred -----CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 5689999999999999999875421 1223589999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCC
Q 043932 845 SNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRP 923 (1017)
Q Consensus 845 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p 923 (1017)
+||+++.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p 305 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhEEECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999866432211 11122457889999999999999999999999999999999 9999
Q ss_pred CCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 043932 924 TDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVA 1003 (1017)
Q Consensus 924 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1003 (1017)
|....... .......... ......+++++.+++.+||+.||++||++.|+++
T Consensus 306 ~~~~~~~~--~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 306 YPGIPVEE--LFKLLKEGHR--------------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp STTCCGGG--HHHHHHTTCC--------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHH--HHHHHhcCCC--------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 97642221 1111110000 0011234567899999999999999999999999
Q ss_pred HHhhcccc
Q 043932 1004 KLCHTRET 1011 (1017)
Q Consensus 1004 ~L~~~~~~ 1011 (1017)
+|+.+.+.
T Consensus 358 ~L~~il~~ 365 (370)
T 2psq_A 358 DLDRILTL 365 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 66
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.7e-41 Score=365.97 Aligned_cols=263 Identities=22% Similarity=0.400 Sum_probs=209.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... +
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED-----D 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-----S
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-----C
Confidence 468999999999999999999999999999999986433 23356788999999999999999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeC
Confidence 7899999999999999998653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||........... ....
T Consensus 156 g~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~~ 227 (294)
T 4eqm_A 156 GIAKALSETSL-------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK-HIQD 227 (294)
T ss_dssp SSSTTC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH-HHSS
T ss_pred CCccccccccc-------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-Hhhc
Confidence 99986643221 111235699999999999998999999999999999999999999976422111000 0000
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhcccc
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-EMRDVVAKLCHTRET 1011 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~ 1011 (1017)
..+. . .......+++.+.+++.+|++.||++|| ++.++.+.|+.+...
T Consensus 228 ~~~~---------~--------------~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 228 SVPN---------V--------------TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp CCCC---------H--------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cCCC---------c--------------chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0000 0 0011123467789999999999999999 899999999887654
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-40 Score=365.47 Aligned_cols=264 Identities=29% Similarity=0.446 Sum_probs=205.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.++||+|+||+||+|++.. .+|+|+++... ....+.+.+|++++++++||||+++++++.. +
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------D 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred cccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------C
Confidence 45689999999999999999999853 48888887543 2345778999999999999999999998743 3
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DF 176 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccC
Confidence 47899999999999999976543 789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCccccc---CCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM---GSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|+++....... ........||+.|+|||++. +..++.++|||||||++|||++|+.||......+......
T Consensus 177 g~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~ 250 (307)
T 3lb7_A 177 GLATVKSRWSG------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250 (307)
T ss_dssp CSSCC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred CCceecccccc------cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHH
Confidence 99976542111 11122346999999999986 5568899999999999999999999997643221111111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
......... ......+++.+.+++.+||+.||++||++.|++++|+.+.+.+
T Consensus 251 ~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 251 GRGYASPDL-----------------------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHTCCCCCS-----------------------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hcCCCCcch-----------------------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111111100 0111234677899999999999999999999999999988765
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=368.52 Aligned_cols=282 Identities=20% Similarity=0.251 Sum_probs=215.0
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---CceE
Confidence 468999999999999999999999999999999997443 234577889999999999999999999886542 2467
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe----CCCCCeEEe
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDMVSHVG 858 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 858 (1017)
++||||+++++|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEc
Confidence 999999999999999986532 12489999999999999999999999 99999999999999 788889999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCccccc--------CCCcCccccchhHHHHHHHHHhCCCCCCccccc
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM--------GSEASMTGDVYSFGILLLELFTGRRPTDAAFTE 930 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~pf~~~~~~ 930 (1017)
|||+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 159 Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 159 DFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp CCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred cCCCceecCCCC---------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999998664322 112356899999999986 567899999999999999999999999754332
Q ss_pred CccHHHHHHhh--cCch-hhhhccchhhHHHHhhcchhHH---HhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 931 GLTLHEFAKIA--LPEK-VIEIVDPLLLIEVMANNSMIQE---DIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 931 ~~~~~~~~~~~--~~~~-~~~~~d~~l~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........... .+.. ...+.... .....+.. .........+..+.+++.+||+.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAE------NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECST------TCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhccc------CCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 22222221111 1111 00000000 00000000 0012234567789999999999999999999999999
Q ss_pred Hhhcc
Q 043932 1005 LCHTR 1009 (1017)
Q Consensus 1005 L~~~~ 1009 (1017)
..+..
T Consensus 304 ~~d~~ 308 (319)
T 4euu_A 304 TSDIL 308 (319)
T ss_dssp HHHHT
T ss_pred cHHHh
Confidence 98754
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-40 Score=369.08 Aligned_cols=257 Identities=22% Similarity=0.304 Sum_probs=206.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++... +..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----CeE
Confidence 4689999999999999999999999999999999974432 2346688999999999999999999998754 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999987553 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++.+...... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+....
T Consensus 152 a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 225 (323)
T 3tki_A 152 ATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (323)
T ss_dssp CEECEETTEE------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC
T ss_pred cceeccCCcc------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc
Confidence 9865432211 11223579999999999987765 7899999999999999999999976543322222221111
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
... .....+++.+.+++.+||+.||++|||+.|++++-.
T Consensus 226 ~~~--------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 226 TYL--------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp TTS--------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred ccC--------------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 000 001123566789999999999999999999988643
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=366.94 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=207.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc------hHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 86 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK--- 86 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence 46799999999999999999999999999999999754321 357789999999999999999999998654
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC----
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---- 853 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 853 (1017)
...++||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 87 --~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 87 --TDVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp --SEEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred --CEEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 67899999999999999997643 689999999999999999999999 999999999999999887
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT 933 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~ 933 (1017)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... .
T Consensus 156 ~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~ 225 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 225 (326)
T ss_dssp CEEECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CEEEEECCCCeECCCCC---------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-H
Confidence 89999999998664221 1123569999999999998899999999999999999999999997542211 1
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.......... .. ......+++.+.+++.+||+.||++|||+.|+++|-
T Consensus 226 ~~~~~~~~~~----------~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 226 LANVSAVNYE----------FE--------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp HHHHHHTCCC----------CC--------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred HHHHHhcCCC----------cC--------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 1111110000 00 011123356788999999999999999999999863
No 71
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=379.75 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=206.9
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.+.||+|+||+||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE----- 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS-----
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC-----
Confidence 456789999999999999999999999999999999975432 3346788999999999999999999998755
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC---CCCCeE
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVSH 856 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~k 856 (1017)
+..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred CEEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 67899999999999999998754 689999999999999999999999 999999999999998 568899
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|.+||...... .....
T Consensus 154 L~DFG~a~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~ 224 (444)
T 3soa_A 154 LADFGLAIEVEGEQ--------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQ 224 (444)
T ss_dssp ECCCSSCBCCCTTC--------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHH
T ss_pred EccCceeEEecCCC--------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHH
Confidence 99999997654322 1122357999999999999989999999999999999999999999764221 11111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........ .. .....+++++.+++.+||+.||++|||+.|+++|
T Consensus 225 i~~~~~~~-----~~-------------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 225 IKAGAYDF-----PS-------------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHTCCCC-----CT-------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCCCCC-----Cc-------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11111000 00 0111235678899999999999999999999986
No 72
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-40 Score=357.30 Aligned_cols=258 Identities=27% Similarity=0.442 Sum_probs=210.0
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|++. ++..||+|++..... ..+++.+|++++++++||||+++++++... +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CceE
Confidence 468999999999999999999997 577899999975433 347789999999999999999999998654 5689
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLA 863 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 863 (1017)
+||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 99999999999999976543 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhhc
Q 043932 864 KFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ..... ....
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~-~~~~ 224 (269)
T 4hcu_A 154 RFVLDDQYT-------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDI-STGF 224 (269)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHH-HTTC
T ss_pred ccccccccc-------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHH-hcCc
Confidence 866433211 1122457889999999998899999999999999999999 999997532211 00000 0000
Q ss_pred CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 943 PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 943 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
.. . ....+++.+.+++.+||+.||++|||+.|++++|+++.++
T Consensus 225 ~~-----~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 RL-----Y---------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CC-----C---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cC-----C---------------------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00 0 0011245688999999999999999999999999998764
No 73
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.6e-40 Score=355.98 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=210.0
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++. ++..||+|++..... ..+++.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKE-----YPI 78 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSE
T ss_pred chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----Cce
Confidence 3568999999999999999999987 677899999975443 347789999999999999999999998654 568
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 150 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSHG-----KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGM 150 (268)
T ss_dssp EEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTC
T ss_pred EEEEEccCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCcc
Confidence 99999999999999998653 2689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+.......... .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ .......
T Consensus 151 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~- 221 (268)
T 3sxs_A 151 TRYVLDDQYVS-------SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKVSQG- 221 (268)
T ss_dssp EEECCTTCEEE-------CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTT-
T ss_pred ceecchhhhhc-------ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHHHHcC-
Confidence 98665432111 122456788999999998889999999999999999999 9999975422110 0000000
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
... .. ...+++.+.+++.+||+.||++|||+.|++++|+.++++
T Consensus 222 ~~~-----~~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 222 HRL-----YR---------------------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCC-----CC---------------------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCC-----CC---------------------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 000 00 011245688999999999999999999999999999875
No 74
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.7e-40 Score=371.91 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=207.0
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 100 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----- 100 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----
Confidence 345789999999999999999999999999999999975432 3456788999999999999999999998755
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC---CCeE
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVSH 856 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 856 (1017)
+..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~k 171 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVK 171 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEE
T ss_pred CEEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEE
Confidence 67899999999999999997653 689999999999999999999999 99999999999999865 4599
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....
T Consensus 172 l~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~ 241 (362)
T 2bdw_A 172 LADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQ 241 (362)
T ss_dssp ECCCTTCBCCTTCC---------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EeecCcceEecCCc---------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 99999998654321 112357999999999999989999999999999999999999999764221 01111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........ . ......+++++.+++.+||+.||++|||+.|++++
T Consensus 242 i~~~~~~~-----~-------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 242 IKAGAYDY-----P-------------------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHTCCCC-----C-------------------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHhCCCCC-----C-------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 0 00112235678999999999999999999999876
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-40 Score=374.78 Aligned_cols=277 Identities=22% Similarity=0.323 Sum_probs=218.3
Q ss_pred cCHHHHHHhhccccccCcccccCCceEEEEE-----eCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceee
Q 043932 695 VSYAELSKATSEFASSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKI 767 (1017)
Q Consensus 695 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 767 (1017)
+...++....++|++.+.||+|+||.||+|+ ...+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 4456667778899999999999999999999 556779999999975432 3446789999999999 79999999
Q ss_pred eeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCc------------------------------------------
Q 043932 768 ITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHL------------------------------------------ 805 (1017)
Q Consensus 768 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------ 805 (1017)
++++... ....++||||+++|+|.+++.......
T Consensus 92 ~~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 9998653 244799999999999999998754210
Q ss_pred ------------------cccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccccccc
Q 043932 806 ------------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLS 867 (1017)
Q Consensus 806 ------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 867 (1017)
....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 012289999999999999999999999 99999999999999999999999999998654
Q ss_pred cccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhhcCchh
Q 043932 868 SHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIALPEKV 946 (1017)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 946 (1017)
..... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||............ ........
T Consensus 245 ~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~- 316 (359)
T 3vhe_A 245 KDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMR- 316 (359)
T ss_dssp SCTTC------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-HHHTCCCC-
T ss_pred ccccc------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH-HHcCCCCC-
Confidence 32211 11223568999999999998899999999999999999998 99999764332111111 11100000
Q ss_pred hhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 947 IEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 947 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
....+++++.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 317 -------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 317 -------------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 0112355788999999999999999999999999998754
No 76
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.6e-40 Score=362.09 Aligned_cols=279 Identities=24% Similarity=0.294 Sum_probs=206.3
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.++||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE----- 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS-----
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC-----
Confidence 44679999999999999999999996 58899999987443 23346788999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++ +|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 162 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLAD 162 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred CEEEEEEcCCCC-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEcc
Confidence 678999999975 88888876542 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. .....
T Consensus 163 fg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~ 233 (311)
T 3niz_A 163 FGLARAFGIPV--------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIF 233 (311)
T ss_dssp CTTCEETTSCC--------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHH
T ss_pred CcCceecCCCc--------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence 99998654221 11122468999999999876 5689999999999999999999999987544322 22222
Q ss_pred HhhcCchhhhhccchhhHHHHhhcch--hHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSM--IQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..........+........+...... ...........+++++.+++.+||+.||++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 22111111110000000000000000 0000011122345678999999999999999999999985
No 77
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-40 Score=378.03 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=212.4
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
...++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++... +
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 185 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----Q 185 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-----S
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-----C
Confidence 345689999999999999999999998999999999874432 3345688999999999999999999998654 5
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.++++... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~Df 257 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDF 257 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcC
Confidence 6799999999999999998643 3689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .......
T Consensus 258 G~s~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~ 329 (377)
T 3cbl_A 258 GMSREEADGVYAA------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVE 329 (377)
T ss_dssp GGCEECTTSEEEC------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHH
T ss_pred CCceecCCCceee------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 9998643322111 0111235778999999988889999999999999999998 99999764221 1111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.... ......+++++.+++.+||+.||++|||+.|+++.|+.+++++
T Consensus 330 ~~~~--------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 330 KGGR--------------------------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp TTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCC--------------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0000 0011224567899999999999999999999999999988654
No 78
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-39 Score=376.25 Aligned_cols=358 Identities=20% Similarity=0.208 Sum_probs=195.6
Q ss_pred CcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccC
Q 043932 94 SPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLL 173 (1017)
Q Consensus 94 ~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 173 (1017)
+..++++++|++|+|++|.+++ +| +++.+++|++|+|++|++++ +| ++.+++|++|+|++|++++. | +++++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~ 106 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLT 106 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCT
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCC
Confidence 3455566666677777666664 34 56666666666666666664 33 66666666666666666643 2 56666
Q ss_pred CccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCC
Q 043932 174 KLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLP 253 (1017)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 253 (1017)
+|++|++++|++++. | ++++++|++|++++|++++. .++.+++|++|++++|+..+.+ .+..+++|++|+++
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCS 178 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECC
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECC
Confidence 666666666666642 2 55666666666666666542 2555555555555555433333 24445555555555
Q ss_pred CccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCC
Q 043932 254 FNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMG 333 (1017)
Q Consensus 254 ~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 333 (1017)
+|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|+++++ | +
T Consensus 179 ~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~------------------- 229 (457)
T 3bz5_A 179 FNKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--V------------------- 229 (457)
T ss_dssp SSCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--C-------------------
T ss_pred CCccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--c-------------------
Confidence 555542 33 33444455555555554432 244444444444444444432 1 3
Q ss_pred CCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCc
Q 043932 334 TANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTI 413 (1017)
Q Consensus 334 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 413 (1017)
..+++|++|++++|++++. . +..+++|+.|++++|
T Consensus 230 -----------~~l~~L~~L~l~~N~l~~~-------------------------~---~~~l~~L~~L~l~~n------ 264 (457)
T 3bz5_A 230 -----------TPLTQLTYFDCSVNPLTEL-------------------------D---VSTLSKLTTLHCIQT------ 264 (457)
T ss_dssp -----------TTCTTCSEEECCSSCCSCC-------------------------C---CTTCTTCCEEECTTC------
T ss_pred -----------cccCCCCEEEeeCCcCCCc-------------------------C---HHHCCCCCEEeccCC------
Confidence 3344555555555554421 1 223445566665554
Q ss_pred chhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcc
Q 043932 414 PDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSIT 493 (1017)
Q Consensus 414 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 493 (1017)
+|+.|++++|.+.+.+| ++++++|+.|++++|.+.+.+|. ...+|+.|++++|
T Consensus 265 --------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------- 317 (457)
T 3bz5_A 265 --------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------- 317 (457)
T ss_dssp --------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC--------------
T ss_pred --------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc--------------
Confidence 34556666666665555 34566666666666665555543 2233333333322
Q ss_pred cccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEec
Q 043932 494 TLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNF 573 (1017)
Q Consensus 494 ~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 573 (1017)
++|+.|+|++|+|++. + ++.+++|+.||+++|+|++. +.|..|++
T Consensus 318 ------------------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~l--------~~L~~L~l 362 (457)
T 3bz5_A 318 ------------------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQDF--------SSVGKIPA 362 (457)
T ss_dssp ------------------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCBC--------TTGGGSSG
T ss_pred ------------------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCCc--------cccccccc
Confidence 3455666666666653 2 56666666666666666641 34455566
Q ss_pred cCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC
Q 043932 574 SSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 574 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
++|+++|. .++..|..+++++|+|+|.+|.
T Consensus 363 ~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 363 LNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp GGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred cCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 66666654 2344556666777777766664
No 79
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=371.69 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=201.6
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.++||+|+||+||+|++..+++.||||++... .....+.+.+|..+++.+ +||||+++++++...
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~---- 96 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP---- 96 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC----
Confidence 356899999999999999999999999999999999743 233456788999999988 799999999998765
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 97 -~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 97 -DRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred -CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 67899999999999999998654 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......
T Consensus 167 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~ 237 (353)
T 3txo_A 167 DFGMCKEGICNG--------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAIL 237 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred cccceeecccCC--------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 999997533211 12233579999999999998889999999999999999999999997642211 111111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM------RDVVAK 1004 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 1004 (1017)
.... . .....++.+.+++.+||+.||++||++ .|+++|
T Consensus 238 ~~~~---------------------~-------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 238 NDEV---------------------V-------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HCCC---------------------C-------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred cCCC---------------------C-------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 1000 0 001124567899999999999999998 777765
No 80
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.2e-40 Score=364.49 Aligned_cols=269 Identities=20% Similarity=0.282 Sum_probs=211.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++... +..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-----~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCG-----KYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEET-----TEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecC-----Ccc
Confidence 4689999999999999999999999999999999875432 24678999999999 999999999998764 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC-----eEE
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-----SHV 857 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl 857 (1017)
++||||+ +++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl 151 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHI 151 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEE
T ss_pred EEEEEeC-CCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEE
Confidence 9999999 899999998753 2789999999999999999999999 9999999999999998887 999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+
T Consensus 152 ~DFg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~ 229 (330)
T 2izr_A 152 IDFALAKEYIDPETKKHI-PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERY 229 (330)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHH
T ss_pred EEcccceeeecCCCCccc-cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHH
Confidence 999999876543221111 11122346799999999999999999999999999999999999999986432211 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
.... .... ..........++ ++.+++..|++.||.+||++.+|.+.|+++.++
T Consensus 230 ~~i~-~~~~-------------------~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 230 QKIG-DTKR-------------------ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHH-HHHH-------------------HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHH-hhhc-------------------cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 1000 0000 000000011124 899999999999999999999999999987654
No 81
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3e-40 Score=373.16 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=202.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.++||+|+||+||+|++..+++.||+|+++... ....+.+.+|..+++++ +||||+++++++...
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~----- 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----- 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS-----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC-----
Confidence 468999999999999999999999999999999997542 23345678899999887 899999999998765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 67899999999999999998653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc----cHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL----TLH 935 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~----~~~ 935 (1017)
||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 197 FGla~~~~~~~--------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~ 268 (396)
T 4dc2_A 197 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268 (396)
T ss_dssp CTTCBCCCCTT--------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH
T ss_pred cceeeecccCC--------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH
Confidence 99997532111 122346799999999999999999999999999999999999999965322110 000
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM------RDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 1004 (1017)
....... .... ..+..++.++.+++.+||+.||.+||++ .|+++|
T Consensus 269 ~~~~~i~-----------------~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 269 YLFQVIL-----------------EKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHHHHHH-----------------HCCC-------CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred HHHHHHh-----------------cccc-------CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0000000 0000 0111235678899999999999999996 566665
No 82
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.1e-40 Score=373.04 Aligned_cols=281 Identities=18% Similarity=0.273 Sum_probs=211.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCC-----cEEEEEEEeeecCcch-----------HHHHHHHHHHHHhcCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGED-----EMIVAVKVINLKQKGA-----------FKSFMAECKALRNIRHRNLIK 766 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 766 (1017)
..++|++.++||+|+||+||+|.+..+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999999764 4789999987543211 123345666677788999999
Q ss_pred eeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCc
Q 043932 767 IITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 846 (1017)
Q Consensus 767 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 846 (1017)
+++++... ..+..+.++||||+ +++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+|
T Consensus 113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 99998664 22346689999999 9999999987542 789999999999999999999999 99999999999
Q ss_pred eEeC--CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCC
Q 043932 847 VLLD--HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPT 924 (1017)
Q Consensus 847 Ill~--~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf 924 (1017)
|+++ .++.+||+|||+++.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf 261 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred EEEecCCCCeEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999 8899999999999876543322111 111223456999999999999989999999999999999999999999
Q ss_pred CcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 925 DAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
....... .............+.++.++.+ ....+++++.+++..||+.||.+||++.++++.
T Consensus 262 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 262 EDNLKDP-KYVRDSKIRYRENIASLMDKCF-----------------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp GGGTTCH-HHHHHHHHHHHHCHHHHHHHHS-----------------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred cccccCH-HHHHHHHHHhhhhHHHHHHHhc-----------------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 8643221 1111111111111111111100 002336789999999999999999999999999
Q ss_pred Hhhccccc
Q 043932 1005 LCHTRETF 1012 (1017)
Q Consensus 1005 L~~~~~~~ 1012 (1017)
|+.+.+..
T Consensus 324 l~~~~~~~ 331 (364)
T 3op5_A 324 LLQGLKAI 331 (364)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99887643
No 83
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.1e-40 Score=370.44 Aligned_cols=257 Identities=21% Similarity=0.284 Sum_probs=205.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-----cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-----KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---- 98 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD---- 98 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 468999999999999999999999999999999996432 12357789999999999999999999998765
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC---e
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---S 855 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~ 855 (1017)
+..|+||||+++|+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +
T Consensus 99 -~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 99 -GMLYMVFEFMDGADLCFEIVKRAD--AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp -TEEEEEEECCSSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred -CEEEEEEeCCCCCCHHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 678999999999999988865321 112589999999999999999999999 9999999999999987654 9
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHH
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLH 935 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~ 935 (1017)
||+|||++........ ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ...
T Consensus 173 kl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~ 242 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGL--------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--LFE 242 (351)
T ss_dssp EECCCTTCEECCTTSC--------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--HHH
T ss_pred EEecCcceeEecCCCe--------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--HHH
Confidence 9999999987643221 112357999999999999989999999999999999999999999763210 111
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......... . ......+++++.+++.+||+.||++|||+.|+++|
T Consensus 243 ~i~~~~~~~------~------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 243 GIIKGKYKM------N------------------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHHTCCCC------C------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCCC------C------------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111100000 0 01112345678999999999999999999999875
No 84
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=367.63 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=204.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.++||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... +
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE-----E 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 468999999999999999999999999999999997432 34457788999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 7899999999999999998653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccC---CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG---SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....
T Consensus 160 G~a~~~~~~~---------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~ 228 (384)
T 4fr4_A 160 NIAAMLPRET---------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEI 228 (384)
T ss_dssp TTCEECCTTC---------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHH
T ss_pred ceeeeccCCC---------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHH
Confidence 9998654221 1233679999999999864 458999999999999999999999997543221 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME-MRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 1004 (1017)
....... .......+++.+.+++.+||+.||.+||+ +.++++|
T Consensus 229 ~~~~~~~------------------------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 229 VHTFETT------------------------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHC------------------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHhhc------------------------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 1100000 00001123567899999999999999998 7777653
No 85
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-40 Score=368.01 Aligned_cols=249 Identities=26% Similarity=0.378 Sum_probs=203.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++... +
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 468999999999999999999999999999999997432 22346788999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+ +|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 789999999 679999887653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|++....... ......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||.........
T Consensus 153 G~s~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------ 217 (336)
T 3h4j_B 153 GLSNIMTDGN---------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF------ 217 (336)
T ss_dssp SCTBTTTTSB---------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB------
T ss_pred ccceeccCCc---------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH------
Confidence 9998654322 1123569999999999988776 78999999999999999999999764322110
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
..+ .... .......++.+.+++.+||+.||.+|||+.|++++-
T Consensus 218 ----~~i---~~~~----------------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 218 ----KKV---NSCV----------------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp ----CCC---CSSC----------------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred ----HHH---HcCC----------------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 000 0000 000011245688999999999999999999998763
No 86
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-39 Score=357.17 Aligned_cols=271 Identities=17% Similarity=0.234 Sum_probs=214.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .+.+.+|+.+++++ +|+|++++++++... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEG-----LHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEET-----TEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCC-----cee
Confidence 4689999999999999999999998999999999864432 35678899999999 799999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC-----eEE
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-----SHV 857 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl 857 (1017)
++||||+ +++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 8999999987542 689999999999999999999999 9999999999999987776 999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+
T Consensus 153 ~Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~ 230 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHI-PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKY 230 (298)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHH
T ss_pred EECccccccccccccccc-cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHH
Confidence 999999876543321111 11123346799999999999998999999999999999999999999976432211 1110
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.... .. ............+++++.+++.+||+.||++||++.+|++.|+++.++.
T Consensus 231 ~~~~---------~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 231 ERIG---------EK-----------KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHH---------HH-----------HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHH---------hh-----------ccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 0000 00 0000001112234678999999999999999999999999999987654
No 87
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=363.08 Aligned_cols=283 Identities=22% Similarity=0.285 Sum_probs=208.1
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-----chHHHHHHHHHHHHhcC---CCCceeeeeeeecC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-----GAFKSFMAECKALRNIR---HRNLIKIITICSSI 774 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 774 (1017)
..++|++.++||+|+||+||+|++..+++.||+|++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35799999999999999999999999999999999974331 22346677887777764 99999999999776
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
........++||||++ |+|.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 5444457899999997 599999987642 2489999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccH
Q 043932 855 SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTL 934 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~ 934 (1017)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|++||........ .
T Consensus 159 ~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~ 228 (308)
T 3g33_A 159 VKLADFGLARIYSYQM---------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-L 228 (308)
T ss_dssp EEECSCSCTTTSTTCC---------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-H
T ss_pred EEEeeCccccccCCCc---------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence 9999999998654221 12235789999999999998999999999999999999999999976433221 1
Q ss_pred HHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 935 HEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 935 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..............+........ ................++++.+.+++.+||+.||++|||+.|+++|
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 229 GKIFDLIGLPPEDDWPRDVSLPR-GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHHHCCCCTTTSCSSCSSCG-GGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhCCCChhhccchhhccc-cccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 12211111100000000000000 0000000001111222346778999999999999999999999876
No 88
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-40 Score=365.14 Aligned_cols=283 Identities=22% Similarity=0.325 Sum_probs=194.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE-----NKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT-----TEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC-----CeE
Confidence 4689999999999999999999999999999999975432 3446788999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||++ |+|.+++...........+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999998 59999987643222234689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .........
T Consensus 155 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 225 (317)
T 2pmi_A 155 ARAFGIPV--------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIM 225 (317)
T ss_dssp CEETTSCC--------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ceecCCCc--------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 98654221 111234689999999998764 68999999999999999999999997643321 111221111
Q ss_pred c-C-chhhhhccc--hhhHHHHh-hcchhHHHh-HHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 L-P-EKVIEIVDP--LLLIEVMA-NNSMIQEDI-RAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~-~-~~~~~~~d~--~l~~~~~~-~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
. + +........ ........ ......... .......+.++.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 1 0 000000000 00000000 000000000 00111245678999999999999999999999876
No 89
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.6e-40 Score=379.47 Aligned_cols=280 Identities=18% Similarity=0.207 Sum_probs=205.1
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec--CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 779 (1017)
..++|++.++||+|+||+||+|++..+++.||||++... .....+++.+|+.+++.++||||+++++++..... ...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999999999999999999754 33445778899999999999999999999865432 233
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...|+||||+++ ++.+.+.. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~D 207 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 207 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CeEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEE
Confidence 578999999976 57766642 478999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+|+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+ .+.....
T Consensus 208 FG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~ 277 (464)
T 3ttj_A 208 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIE 277 (464)
T ss_dssp CCCC-----CC---------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EEeeeecCCCc---------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 99998654321 1233579999999999999999999999999999999999999997643221 1222221
Q ss_pred hhcCc--hhhhhccchhhHHHHhhc-----chhHH--------HhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPE--KVIEIVDPLLLIEVMANN-----SMIQE--------DIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~--~~~~~~d~~l~~~~~~~~-----~~~~~--------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..... .....+.+... .+.... ..+.. ..........+++.+++.+||+.||++|||+.|+++|
T Consensus 278 ~lg~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 278 QLGTPCPEFMKKLQPTVR-NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHCSCCHHHHTTSCHHHH-HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcCCCCHHHHHHcchhhh-hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111 01111111100 000000 00000 0011223346778999999999999999999999987
Q ss_pred H
Q 043932 1005 L 1005 (1017)
Q Consensus 1005 L 1005 (1017)
-
T Consensus 357 p 357 (464)
T 3ttj_A 357 P 357 (464)
T ss_dssp T
T ss_pred h
Confidence 3
No 90
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.6e-40 Score=356.55 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=204.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc-------hHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-------AFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 46899999999999999999999999999999998644322 126788999999999999999999998543
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeCCCCC
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~ 854 (1017)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred -----CeEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 2699999999999999876542 789999999999999999999999 8 999999999999988776
Q ss_pred -----eEEeecccccccccccccccccCCCcccccccCccccCccccc--CCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 855 -----SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM--GSEASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 855 -----~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
+||+|||+++.... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp TCSCCEEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCceeEEeCCCCccccccc-----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999874332 122356899999999984 456789999999999999999999999764
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCH 1007 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1007 (1017)
................ .+ .....+++.+.+++.+||+.||++|||+.|+++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~-------~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 232 SYGKIKFINMIREEGL-------RP------------------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCHHHHHHHHHHSCC-------CC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cccHHHHHHHHhccCC-------CC------------------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 3322111111111000 00 0112335678999999999999999999999999986
Q ss_pred c
Q 043932 1008 T 1008 (1017)
Q Consensus 1008 ~ 1008 (1017)
+
T Consensus 287 l 287 (287)
T 4f0f_A 287 L 287 (287)
T ss_dssp C
T ss_pred C
Confidence 4
No 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-40 Score=371.82 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=207.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|.+..+++.||+|++..........+.+|++++++++||||+++++++... ...+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK-----YEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-----SEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC-----CEEE
Confidence 46899999999999999999999999999999999866555556789999999999999999999998654 6789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC--CCCeEEeecc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH--DMVSHVGDFG 861 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG 861 (1017)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 9999999999999997653 2689999999999999999999999 9999999999999974 5789999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..........
T Consensus 197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~ 266 (387)
T 1kob_A 197 LATKLNPDE---------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCD 266 (387)
T ss_dssp TCEECCTTS---------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCC
T ss_pred cceecCCCc---------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC
Confidence 998764322 112246899999999999989999999999999999999999999764221 1111111100
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. .++ .....+++++.+++.+||+.||++|||+.|++++
T Consensus 267 ~~------~~~------------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 267 WE------FDE------------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CC------CCS------------------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CC------CCc------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00 000 0111235678999999999999999999999986
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=359.13 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=205.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-----~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA-----Q 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS-----S
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC-----C
Confidence 468999999999999999999999999999999997432 23456788999999999999999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 7899999999999999998754 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 151 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~ 218 (318)
T 1fot_A 151 GFAKYVPDV-----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNA 218 (318)
T ss_dssp SSCEECSSC-----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHC
T ss_pred CcceecCCc-----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC
Confidence 999865321 123579999999999999999999999999999999999999997532210 01111100
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1004 (1017)
.. . .....++++.+++.+|++.||++|| ++.|+++|
T Consensus 219 ~~---------------------~-------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 EL---------------------R-------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CC---------------------C-------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CC---------------------C-------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00 0 0011245688999999999999999 89999876
No 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=374.02 Aligned_cols=266 Identities=23% Similarity=0.388 Sum_probs=208.9
Q ss_pred hccccccCcccccCCceEEEEEe-----CCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++|++.++||+|+||+||+|++ ..+++.||||++.... .....++.+|+.++++++||||+++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--- 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 46899999999999999999994 4567899999986432 33446788999999999999999999998654
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCC-ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC---
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDH-LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--- 853 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 853 (1017)
...++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 147 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 147 --LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred --CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 5579999999999999999875421 1224689999999999999999999999 999999999999999555
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGL 932 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~ 932 (1017)
.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 222 ~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~- 294 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGY------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE- 294 (367)
T ss_dssp CEEECCCHHHHHHHHHSS------CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred eEEECCCccccccccccc------cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 599999999986533221 111223468999999999988899999999999999999998 999997642211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
.......... ......++..+.+++.+||+.||++|||+.||+++|+.+.+.
T Consensus 295 -~~~~i~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 295 -VLEFVTSGGR--------------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -HHHHHHTTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -HHHHHHcCCC--------------------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1111100000 000112356789999999999999999999999999988764
No 94
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.1e-40 Score=373.08 Aligned_cols=263 Identities=25% Similarity=0.428 Sum_probs=199.5
Q ss_pred hccccccCcccccCCceEEEEEeC---CCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS----- 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----
Confidence 458999999999999999999986 467789999997543 33456789999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CceEEEEeCCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECc
Confidence 56899999999999999998654 2689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .....
T Consensus 191 fg~a~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i 263 (373)
T 2qol_A 191 FGLGRVLEDDPEAAY-----TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAV 263 (373)
T ss_dssp C---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHH
T ss_pred CccccccccCCccce-----eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence 999987653221110 1112345788999999998899999999999999999998 999996542210 00000
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
..... ......++..+.+++.+||+.||++||++.||++.|+.+.+..
T Consensus 264 ~~~~~--------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 264 DEGYR--------------------------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HTTEE--------------------------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HcCCC--------------------------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00000 0001134567899999999999999999999999999886543
No 95
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-39 Score=372.02 Aligned_cols=288 Identities=17% Similarity=0.146 Sum_probs=209.4
Q ss_pred hhccccccCccccc--CCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQG--SFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.++||+| +||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 98 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD---- 98 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC----
Confidence 35789999999999 99999999999999999999997543 23456788899999999999999999998765
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 99 -~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 170 (389)
T 3gni_B 99 -NELWVVTSFMAYGSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLS 170 (389)
T ss_dssp -TEEEEEEECCTTCBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred -CEEEEEEEccCCCCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEc
Confidence 678999999999999999987532 3689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC--CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG--SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|||.+............ .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 171 dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~- 248 (389)
T 3gni_B 171 GLRSNLSMISHGQRQRV-VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE- 248 (389)
T ss_dssp CGGGCEECEETTEECSC-BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-
T ss_pred ccccceeeccccccccc-cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-
Confidence 99998755332211111 1112223478999999999987 5789999999999999999999999976433221111
Q ss_pred HHHhhcCchhhhhc---------------cchhhHHHH---hhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 043932 937 FAKIALPEKVIEIV---------------DPLLLIEVM---ANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM 998 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~---------------d~~l~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 998 (1017)
......+....... ......... ................+++.+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta 328 (389)
T 3gni_B 249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328 (389)
T ss_dssp C--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence 11110000000000 000000000 000000000111233456779999999999999999999
Q ss_pred HHHHHH
Q 043932 999 RDVVAK 1004 (1017)
Q Consensus 999 ~evl~~ 1004 (1017)
.|+++|
T Consensus 329 ~ell~h 334 (389)
T 3gni_B 329 STLLNH 334 (389)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999976
No 96
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=363.48 Aligned_cols=267 Identities=24% Similarity=0.374 Sum_probs=205.4
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCC----
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDS---- 776 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 776 (1017)
+..++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++.+...
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 345789999999999999999999999999999999975443 345788999999999999999999998865422
Q ss_pred ------------------------------------------------CCCceeEEEEEeccCCCHHHHHhhCCCCcccc
Q 043932 777 ------------------------------------------------KGADFKALVFECMKNGSLEDWLHQSNDHLEVC 808 (1017)
Q Consensus 777 ------------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 808 (1017)
....+.++||||+++|+|.+++..... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~ 159 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS---LE 159 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS---GG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC---cc
Confidence 112358999999999999999987643 23
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccccccccccccccc----cCCCccccc
Q 043932 809 KLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTAS----KTSSSSIGI 884 (1017)
Q Consensus 809 ~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~~ 884 (1017)
..++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........... .........
T Consensus 160 ~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T 3qd2_B 160 DREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ 236 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence 457778899999999999999999 9999999999999999999999999999876543211110 001122335
Q ss_pred ccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcch
Q 043932 885 KGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSM 964 (1017)
Q Consensus 885 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 964 (1017)
.||+.|+|||++.+..++.++||||+||++|||++|..|+..... ....... .
T Consensus 237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~---~~~~~~~---------~--------------- 289 (332)
T 3qd2_B 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR---IITDVRN---------L--------------- 289 (332)
T ss_dssp C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH---HHHHHHT---------T---------------
T ss_pred CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH---HHHHhhc---------c---------------
Confidence 799999999999999999999999999999999998776432100 0000000 0
Q ss_pred hHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 965 IQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 965 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.........++.+.+++.+||+.||++|||+.|++++
T Consensus 290 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 290 ---KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp ---CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ---CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 0011223345667899999999999999999999975
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.4e-40 Score=366.38 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=204.2
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1017)
...++|++.++||+|+||+||+|+++.+++.||+|+++... ....+.+..|..+++.+ +||||+++++++...
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~--- 90 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK--- 90 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS---
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC---
Confidence 34578999999999999999999999999999999997542 33456778899999887 899999999998765
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
+..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 91 --~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 91 --ENLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp --SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 67899999999999999998643 689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....
T Consensus 160 ~DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i 230 (345)
T 1xjd_A 160 ADFGMCKENMLGD--------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-LFHSI 230 (345)
T ss_dssp CCCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred eEChhhhhcccCC--------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH
Confidence 9999997543211 11234679999999999999899999999999999999999999997642211 01110
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHH-HHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMR-DVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~ 1004 (1017)
... .+ . ....+++++.+++.+||+.||++||++. |+++|
T Consensus 231 ~~~-~~-~--------------------------~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 231 RMD-NP-F--------------------------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHC-CC-C--------------------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HhC-CC-C--------------------------CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 000 00 0 0011245688999999999999999997 66544
No 98
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.2e-40 Score=360.25 Aligned_cols=278 Identities=19% Similarity=0.264 Sum_probs=205.1
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++... +..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-----CEE
Confidence 579999999999999999999999999999999975432 3347788999999999999999999998765 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++ ++.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999976 6666665543 2689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCC-cCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE-ASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++...... .......||+.|+|||++.+.. ++.++||||+||++|||++|..||.................
T Consensus 148 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 148 ARAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp CEECCSCC--------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred ceecCCcc--------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 98654221 1122346899999999997765 79999999999999999999888644333222222222221
Q ss_pred cCchhhhhccchhhHHHHhh-cchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMAN-NSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.......+........+... ...............++.+.+++.+||+.||++|||++|+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11110000000000000000 0000000011112345678899999999999999999999875
No 99
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8e-40 Score=381.66 Aligned_cols=291 Identities=21% Similarity=0.266 Sum_probs=195.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.++||+|+||+||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++..........
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999999999999999986432 234577899999999999999999999987655455577
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.|+||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecc-ccchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 89999998 469999997653 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccc-------------------cCCCcccccccCccccCcccc-cCCCcCccccchhHHHHHHHHHh--
Q 043932 862 LAKFLSSHQLDTAS-------------------KTSSSSIGIKGTVGYVAPEYC-MGSEASMTGDVYSFGILLLELFT-- 919 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~-------------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt-- 919 (1017)
+|+........... .........+||+.|+|||++ .+..++.++||||+||++|||++
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 99876432211000 001123446789999999976 45679999999999999999999
Q ss_pred ---------CCCCCCcccccCc-------------------cHHHHHHhhc--CchhhhhccchhhHHHHhh-cchhHHH
Q 043932 920 ---------GRRPTDAAFTEGL-------------------TLHEFAKIAL--PEKVIEIVDPLLLIEVMAN-NSMIQED 968 (1017)
Q Consensus 920 ---------g~~pf~~~~~~~~-------------------~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~-~~~~~~~ 968 (1017)
|+++|.+...... .+..+..... +......+.......+... .......
T Consensus 282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (458)
T 3rp9_A 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD 361 (458)
T ss_dssp TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence 5666654321000 0000000000 0000000110000000000 0000001
Q ss_pred hHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 969 IRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 969 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.......+++++.+++.+||+.||++|||++|+++|
T Consensus 362 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111223346778999999999999999999999987
No 100
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=368.00 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=192.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++... +..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETP-----TEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecC-----CeE
Confidence 4568999999999999999999999999999999997543 236678999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC---CCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 859 (1017)
++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 99999999999999997653 689999999999999999999999 9999999999999975 88999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 195 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~ 265 (349)
T 2w4o_A 195 FGLSKIVEHQV---------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265 (349)
T ss_dssp CC-------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred CccccccCccc---------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence 99998654221 112356899999999999989999999999999999999999999754322111111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.... .. .....+++..+.+++.+||+.||++|||+.|++++
T Consensus 266 ~~~~-----~~-------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 266 CEYY-----FI-------------------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TCCC-----CC-------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCc-----cC-------------------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1000 00 00111235678899999999999999999999986
No 101
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=369.81 Aligned_cols=296 Identities=23% Similarity=0.350 Sum_probs=207.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHH--HHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKA--LRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||+||+|++ +++.||||++..... ..+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 56899999999999999999987 588999999974432 334444444 45579999999998776554555567
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC------CCCceeecCCCCceEeCCCCCe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------QPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
.++||||+++|+|.+++... ..++..++.++.||+.||+|||+.. .++|+||||||+||+++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 89999999999999999765 4588899999999999999999873 2389999999999999999999
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccC-------CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-------SEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
||+|||+++.....................||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 9999999987654332221112222334579999999999977 456789999999999999999977764432
Q ss_pred ccCccHHHHHH-hhcCchhhhhccchhhHHHHhhcc-hhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 929 TEGLTLHEFAK-IALPEKVIEIVDPLLLIEVMANNS-MIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 929 ~~~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
........+.. ........+. . ........ ...+........+++++.+++.+||+.||++|||+.|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDM-Q----VLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHH-H----HHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHH-H----hhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 21110000000 0000000000 0 00000000 0000000112235678999999999999999999999999999
Q ss_pred hccccccccC
Q 043932 1007 HTRETFFGRR 1016 (1017)
Q Consensus 1007 ~~~~~~~~~~ 1016 (1017)
++.+.|..++
T Consensus 315 ~ll~~~~~~~ 324 (336)
T 3g2f_A 315 ELMMIWERNK 324 (336)
T ss_dssp HHHHCCCC--
T ss_pred HHHHHHHhcc
Confidence 9998886553
No 102
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=358.14 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=197.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--------------------------chHHHHHHHHHHHH
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------------------------GAFKSFMAECKALR 757 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 757 (1017)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999874421 12356889999999
Q ss_pred hcCCCCceeeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 043932 758 NIRHRNLIKIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPM 837 (1017)
Q Consensus 758 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 837 (1017)
+++||||+++++++.... .+..++||||+++++|.++... ..+++.+++.++.||+.||+|||++ +|
T Consensus 92 ~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPN---EDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSS---SSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcCC---CCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 999999999999986532 3678999999999999876432 2689999999999999999999999 99
Q ss_pred eeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCC---cCccccchhHHHHH
Q 043932 838 VHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE---ASMTGDVYSFGILL 914 (1017)
Q Consensus 838 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il 914 (1017)
+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC--------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccc--------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 9999999999999999999999999986643221 112356999999999997754 47889999999999
Q ss_pred HHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCC
Q 043932 915 LELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFE 994 (1017)
Q Consensus 915 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 994 (1017)
|||++|+.||...... ........... ... ....+++.+.+++.+||+.||++
T Consensus 231 ~~l~~g~~pf~~~~~~--~~~~~~~~~~~----~~~---------------------~~~~~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 231 YCFVFGQCPFMDERIM--CLHSKIKSQAL----EFP---------------------DQPDIAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp HHHHHSSCSSCCSSHH--HHHHHHHHCCC----CCC---------------------SSSCCCHHHHHHHHHHTCSCTTT
T ss_pred HHHHHCCCCCCCccHH--HHHHHHhcccC----CCC---------------------CccccCHHHHHHHHHHhhcChhh
Confidence 9999999999753211 00000000000 000 00123567899999999999999
Q ss_pred CCCHHHHHHH
Q 043932 995 RMEMRDVVAK 1004 (1017)
Q Consensus 995 RPs~~evl~~ 1004 (1017)
|||+.|+++|
T Consensus 284 R~s~~e~l~h 293 (298)
T 2zv2_A 284 RIVVPEIKLH 293 (298)
T ss_dssp SCCHHHHTTC
T ss_pred CCCHHHHhcC
Confidence 9999999875
No 103
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-40 Score=365.89 Aligned_cols=265 Identities=20% Similarity=0.348 Sum_probs=200.6
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-~~ 88 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP-AG 88 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET-TE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC-CC
Confidence 3568999999999999999999999999999999997543 2334678899999999999999999999865422 22
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...|+||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 159 (311)
T 3ork_A 89 PLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159 (311)
T ss_dssp EEEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECC
T ss_pred cccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEee
Confidence 45699999999999999997653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+++........ ........||+.|+|||++.+..++.++||||+||++|||++|+.||...............
T Consensus 160 fg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 234 (311)
T 3ork_A 160 FGIARAIADSGNS-----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234 (311)
T ss_dssp CSCC-----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC
T ss_pred ccCcccccccccc-----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC
Confidence 9999866432211 11122356899999999999999999999999999999999999999764322111000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH-HHhh
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVA-KLCH 1007 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~ 1007 (1017)
...+ .......+++++.+++.+||+.||++||++.++++ .+..
T Consensus 235 ~~~~-------------------------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 235 DPIP-------------------------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp CCCC-------------------------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCC-------------------------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 0000 00111224667899999999999999997666554 4433
No 104
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-39 Score=366.08 Aligned_cols=256 Identities=21% Similarity=0.274 Sum_probs=196.4
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||+||+|++..+++.||+|++..... ..+.+.+|+.++++++||||+++++++... +..
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~ 91 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTP-----THL 91 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----CEE
Confidence 35689999999999999999999999999999999975433 236788999999999999999999998765 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC--eEEeec
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV--SHVGDF 860 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Df 860 (1017)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+||
T Consensus 92 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp EEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeec
Confidence 99999999999999997643 689999999999999999999999 9999999999999987765 999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCcc-ccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMT-GDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++...... ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...............
T Consensus 163 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~ 233 (361)
T 3uc3_A 163 GYSKSSVLHS---------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233 (361)
T ss_dssp CCC------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH
T ss_pred CccccccccC---------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence 9987432211 1123569999999999988777655 89999999999999999999765332221111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
. ..... ... ....+++.+.+++.+||+.||++|||+.|+++|-
T Consensus 234 ~-~~~~~-----------------~~~-----~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 234 I-LSVKY-----------------SIP-----DDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp H-HTTCC-----------------CCC-----TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred H-hcCCC-----------------CCC-----CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 1 00000 000 0001245688999999999999999999999873
No 105
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-40 Score=368.01 Aligned_cols=276 Identities=23% Similarity=0.380 Sum_probs=199.6
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcE---EEEEEEeeec--CcchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEM---IVAVKVINLK--QKGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
+....++|++.+.||+|+||+||+|++..++. .||||++... .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 33446789999999999999999999887665 7999999754 344567899999999999999999999998665
Q ss_pred CCCC-CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 775 DSKG-ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 775 ~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
...+ ....++||||+++|+|.+++...........+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 3221 123489999999999999997643322333689999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGL 932 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~ 932 (1017)
.+||+|||+++........ .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||.......
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~- 247 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE- 247 (323)
T ss_dssp CEEECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-
T ss_pred CEEEeeccccccccccccc------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-
Confidence 9999999999866433211 11122457889999999999899999999999999999999 999997643221
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
........... .....+++.+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 248 ~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 248 IYNYLIGGNRL---------------------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHTTCCC---------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCC---------------------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111100000 001123567899999999999999999999999999987643
No 106
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=370.50 Aligned_cols=275 Identities=24% Similarity=0.381 Sum_probs=214.4
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeC-----CCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeee
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICS 772 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 772 (1017)
++....++|++.+.||+|+||.||+|++. .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34445679999999999999999999986 3568999999975433 34567899999999999999999999986
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCCc------------------cccccCHHHHHHHHHHHHHHHHHHhhCCC
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDHL------------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQ 834 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 834 (1017)
.. +..++||||+++|+|.+++....... ....+++.+++.++.||++||+|||++
T Consensus 121 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-- 193 (343)
T 1luf_A 121 VG-----KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-- 193 (343)
T ss_dssp SS-----SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cC-----CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 54 56899999999999999998753210 114789999999999999999999999
Q ss_pred CCceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHH
Q 043932 835 PPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILL 914 (1017)
Q Consensus 835 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il 914 (1017)
+|+||||||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++
T Consensus 194 -~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 266 (343)
T 1luf_A 194 -KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266 (343)
T ss_dssp -TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -CeecCCCCcceEEECCCCeEEEeecCCCcccccCccc------cccCCCcccceecChhhhccCCcCcccccHHHHHHH
Confidence 9999999999999999999999999999866432211 111234688999999999888899999999999999
Q ss_pred HHHHh-CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCC
Q 043932 915 LELFT-GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPF 993 (1017)
Q Consensus 915 ~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 993 (1017)
|||++ |..||...... +.......... ......+++.+.+++.+||+.||+
T Consensus 267 ~el~t~g~~p~~~~~~~-----~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~ 318 (343)
T 1luf_A 267 WEIFSYGLQPYYGMAHE-----EVIYYVRDGNI-----------------------LACPENCPLELYNLMRLCWSKLPA 318 (343)
T ss_dssp HHHHTTTCCTTTTSCHH-----HHHHHHHTTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred HHHHhcCCCcCCCCChH-----HHHHHHhCCCc-----------------------CCCCCCCCHHHHHHHHHHcccCcc
Confidence 99999 99999754221 11110000000 001112356789999999999999
Q ss_pred CCCCHHHHHHHHhhcccccccc
Q 043932 994 ERMEMRDVVAKLCHTRETFFGR 1015 (1017)
Q Consensus 994 ~RPs~~evl~~L~~~~~~~~~~ 1015 (1017)
+||++.|++++|+++.+++.++
T Consensus 319 ~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 319 DRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp GSCCHHHHHHHHHHTTC-----
T ss_pred cCCCHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999887653
No 107
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-40 Score=380.44 Aligned_cols=265 Identities=19% Similarity=0.210 Sum_probs=209.4
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeec
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSS 773 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1017)
+.++....++|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|..+++.++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999999999999999997432 2223458899999999999999999999876
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
. +..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +||||||||+|||++.++
T Consensus 146 ~-----~~~~lV~Ey~~gg~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 146 D-----NNLYLVMDYYVGGDLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp S-----SEEEEEECCCTTCBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred C-----CEEEEEEecCCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 5 67899999999999999998743 2689999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCccccc-----CCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM-----GSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
.+||+|||+|+........ ......||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 213 ~vkL~DFGla~~~~~~~~~-------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTV-------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp CEEECCCTTCEECCTTSCE-------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CEEEcchhhhhhcccCCCc-------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999765432211 112357999999999986 4578999999999999999999999997642
Q ss_pred ccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHH
Q 043932 929 TEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFE--RMEMRDVVAKL 1005 (1017)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 1005 (1017)
..+ ......... ....- +.....+++++.+++.+|++.+|++ ||+++|+++|-
T Consensus 286 ~~~-~~~~i~~~~-----~~~~~------------------p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 286 LVE-TYGKIMNHK-----ERFQF------------------PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp HHH-HHHHHHTHH-----HHCCC------------------CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred hhH-HHHhhhhcc-----ccccC------------------CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 211 111110000 00000 0000123567889999999999988 99999998863
No 108
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-39 Score=364.20 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=203.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|..+++++ +||||+++++++...
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----- 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----- 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC-----
Confidence 357999999999999999999999999999999997543 23446688999999988 899999999998664
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 67899999999999999997653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc----cHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL----TLH 935 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~----~~~ 935 (1017)
||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 154 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 225 (345)
T 3a8x_A 154 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225 (345)
T ss_dssp GGGCBCSCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH
T ss_pred ccccccccCCC--------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH
Confidence 99997532211 112335799999999999999999999999999999999999999965321110 000
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM------RDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 1004 (1017)
...... ..... ......+.++.+++.+||+.||.+||++ .|+++|
T Consensus 226 ~~~~~i-----------------~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 226 YLFQVI-----------------LEKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HHHHHH-----------------HHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred HHHHHH-----------------HcCCC-------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 000000 00000 0011235678899999999999999996 677655
No 109
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.9e-40 Score=356.90 Aligned_cols=262 Identities=25% Similarity=0.424 Sum_probs=208.6
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
+....++|++.+.||+|+||+||+|++. ++..||+|++..... ..+++.+|++++++++||||+++++++...
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 91 (283)
T 3gen_A 19 WEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ----- 91 (283)
T ss_dssp TBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred ccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecC-----
Confidence 3345678999999999999999999987 677899999975433 347789999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 163 (283)
T 3gen_A 92 RPIFIITEYMANGCLLNYLREMR-----HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 163 (283)
T ss_dssp SSEEEEECCCTTCBHHHHHHCGG-----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECS
T ss_pred CCeEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcc
Confidence 66899999999999999997643 2689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ......
T Consensus 164 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~ 235 (283)
T 3gen_A 164 FGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAEHIA 235 (283)
T ss_dssp TTGGGGBCCHHHH-------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHH
T ss_pred ccccccccccccc-------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-HHHHHh
Confidence 9999866433211 1122457889999999998889999999999999999998 999997642211 011100
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
. .... . ....+++.+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 236 ~-~~~~-----~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 236 Q-GLRL-----Y---------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp T-TCCC-----C---------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c-ccCC-----C---------------------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0 0000 0 0011245688999999999999999999999999988653
No 110
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.6e-40 Score=373.22 Aligned_cols=262 Identities=18% Similarity=0.255 Sum_probs=209.0
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
.++....++|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 345556789999999999999999999999999999999997422 22335678999999999999999999998764
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
+..|+||||+++|+|.++++.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 142 -----~~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 142 -----RYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp -----SEEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred -----CEEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 6789999999999999999754 578999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccccccccccccCCCcccccccCccccCcccccCCC----cCccccchhHHHHHHHHHhCCCCCCccccc
Q 043932 855 SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE----ASMTGDVYSFGILLLELFTGRRPTDAAFTE 930 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~pf~~~~~~ 930 (1017)
+||+|||+|+........ ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||......
T Consensus 207 ikL~DFG~a~~~~~~~~~-------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 279 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279 (410)
T ss_dssp EEECCCTTCEECCTTSEE-------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred EEEeccceeEeeccCCcc-------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh
Confidence 999999999866432211 112357999999999997655 789999999999999999999999764221
Q ss_pred CccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHHh
Q 043932 931 GLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFE--RMEMRDVVAKLC 1006 (1017)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~ 1006 (1017)
. .......... ...- +....+++++.+++.+||+.+|.+ ||++.||++|-.
T Consensus 280 ~-~~~~i~~~~~-----~~~~-------------------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 280 G-TYSKIMNHKN-----SLTF-------------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp H-HHHHHHTHHH-----HCCC-------------------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred h-HHHHHHhccc-----cccC-------------------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 1 1111110000 0000 000123567889999999999998 999999998754
No 111
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.9e-39 Score=352.26 Aligned_cols=253 Identities=22% Similarity=0.254 Sum_probs=207.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++..++..||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-----TDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CeE
Confidence 356899999999999999999999999999999999876666678899999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 859 (1017)
++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 99999999999999987653 689999999999999999999999 99999999999999 7889999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++....... ......||+.|+|||++.+ .++.++||||+|+++|||++|+.||....... .......
T Consensus 153 fg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~ 221 (277)
T 3f3z_A 153 FGLAARFKPGK---------MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIRE 221 (277)
T ss_dssp CTTCEECCTTS---------CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cccceeccCcc---------chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHh
Confidence 99998654322 1123468999999999876 48999999999999999999999997642211 1111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...... ......+++.+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 222 GTFTFP------------------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CCCCCC------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCCC------------------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00111345678999999999999999999999875
No 112
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.4e-40 Score=368.82 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=199.3
Q ss_pred cccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEEEEE
Q 043932 708 ASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKALVFE 787 (1017)
Q Consensus 708 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 787 (1017)
...++||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++... +..++|||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~lv~E 166 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-----NDIVLVME 166 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEEEEEEE
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEEEEEe
Confidence 3367899999999999999999999999999876655667899999999999999999999998764 67899999
Q ss_pred eccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe--CCCCCeEEeecccccc
Q 043932 788 CMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL--DHDMVSHVGDFGLAKF 865 (1017)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfG~a~~ 865 (1017)
|+++|+|.+++.... ..+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 167 ~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 167 YVDGGELFDRIIDES-----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp CCTTCEEHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred CCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 999999999987643 3689999999999999999999999 99999999999999 6678999999999987
Q ss_pred cccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCch
Q 043932 866 LSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEK 945 (1017)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 945 (1017)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 239 ~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~ 308 (373)
T 2x4f_A 239 YKPRE---------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDLE 308 (373)
T ss_dssp CCTTC---------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCSC
T ss_pred cCCcc---------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCC
Confidence 64322 112246999999999999889999999999999999999999999764221 11111111111000
Q ss_pred hhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 946 VIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 946 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......+++++.+++.+||+.||.+|||+.|++++
T Consensus 309 ------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 309 ------------------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ------------------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------------------------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00112235678999999999999999999999985
No 113
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8e-40 Score=363.79 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=202.4
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEE----EEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMI----VAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
.++|++.++||+|+||+||+|++..+++. ||+|.+.... ....+++.+|+.++++++||||++++++|...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 89 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----
Confidence 46899999999999999999999877765 4777765332 34457899999999999999999999998653
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
..++|+||+++|+|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 --~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 90 --TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp --SEEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred --CeEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEc
Confidence 36899999999999999987543 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||+|+........ .......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 160 Dfg~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~ 231 (327)
T 3poz_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 231 (327)
T ss_dssp CTTHHHHHTTTCC-------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred cCcceeEccCCccc------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHH
Confidence 99999876533211 11122457889999999999999999999999999999999 999997643221 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
....... .....++..+.+++.+||+.||++||++.|++++|+.+.+
T Consensus 232 ~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 232 LEKGERL--------------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHTTCCC--------------------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HHcCCCC--------------------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111000 0011235568899999999999999999999999988764
No 114
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.6e-40 Score=359.55 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=205.0
Q ss_pred hccccccCcccccCCceEEEEEeCCCc-------EEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDE-------MIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
.++|++.+.||+|+||+||+|++..++ ..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG-- 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC--
Confidence 468999999999999999999987665 57999999766666678899999999999999999999998654
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC--
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-- 854 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-- 854 (1017)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 85 ---~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 85 ---DENILVQEFVKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp ---TCCEEEEECCTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred ---CCCEEEEECCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 56789999999999999998754 2589999999999999999999999 9999999999999998887
Q ss_pred ------eEEeecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 855 ------SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 855 ------~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
+||+|||.+...... ....||+.|+|||++.+ ..++.++||||+||++|||++|..|+...
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPK------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCH------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccceeeeccCcccccccCc------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 999999998754321 12357899999999987 67899999999999999999965554332
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCH 1007 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1007 (1017)
....... ..... ... .....++++.+++.+||+.||++|||+.|++++|+.
T Consensus 222 ~~~~~~~-~~~~~--~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 222 LDSQRKL-QFYED--RHQ--------------------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp SCHHHHH-HHHHT--TCC--------------------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred cchHHHH-HHhhc--cCC--------------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2111100 00000 000 000113457899999999999999999999999999
Q ss_pred ccccccc
Q 043932 1008 TRETFFG 1014 (1017)
Q Consensus 1008 ~~~~~~~ 1014 (1017)
+.....+
T Consensus 273 l~~p~~~ 279 (289)
T 4fvq_A 273 LFTPDLV 279 (289)
T ss_dssp CC-----
T ss_pred hcCCCCC
Confidence 8765443
No 115
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.7e-40 Score=362.09 Aligned_cols=278 Identities=24% Similarity=0.415 Sum_probs=207.9
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCC---CcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeee
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICS 772 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 772 (1017)
.++....++|.+.+.||+|+||.||+|++.. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3444556789999999999999999998754 56789999987543 334567899999999999999999999987
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 852 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 852 (1017)
.....+....++||||+++|+|.+++...........+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 765444456799999999999999996543322335799999999999999999999999 99999999999999999
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccC
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEG 931 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~ 931 (1017)
+.+||+|||++......... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 257 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257 (313)
T ss_dssp SCEEECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred CcEEEeecCcceeccccccc------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH
Confidence 99999999999866432211 11122457889999999999899999999999999999999 889987643221
Q ss_pred ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 932 LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
........... .....+++.+.+++.+||+.||++|||+.|++++|+.+.++
T Consensus 258 --~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 258 --MYDYLLHGHRL--------------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --HHHHHHTTCCC--------------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHcCCCC--------------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11111100000 00112356789999999999999999999999999998876
Q ss_pred c
Q 043932 1012 F 1012 (1017)
Q Consensus 1012 ~ 1012 (1017)
.
T Consensus 310 l 310 (313)
T 3brb_A 310 L 310 (313)
T ss_dssp C
T ss_pred c
Confidence 4
No 116
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8e-39 Score=370.61 Aligned_cols=358 Identities=19% Similarity=0.231 Sum_probs=227.1
Q ss_pred CCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCC
Q 043932 111 NSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLP 190 (1017)
Q Consensus 111 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 190 (1017)
....+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|++++. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 34444555667777777777777777774 34 567777777777777777653 3 66666777777777776653 2
Q ss_pred ccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCC
Q 043932 191 DFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLP 270 (1017)
Q Consensus 191 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 270 (1017)
++++++|++|++++|++++. + ++.+++|++|++++|++++. + ++.+++|++|++++|+..
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~------------ 161 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKI------------ 161 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCC------------
T ss_pred --cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcc------------
Confidence 56666666666666666542 2 55555566666666555542 1 444555555555555333
Q ss_pred ccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcc
Q 043932 271 NLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSL 350 (1017)
Q Consensus 271 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 350 (1017)
+.+ .+..+++|+.|++++|++++.. +..+++|+.|++++|+++... +..+++|
T Consensus 162 -------------~~~--~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~~---------l~~l~~L 214 (457)
T 3bz5_A 162 -------------TKL--DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKLD---------LNQNIQL 214 (457)
T ss_dssp -------------CCC--CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCCC---------CTTCTTC
T ss_pred -------------ccc--ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCeec---------cccCCCC
Confidence 233 2445555666666666555431 445555555555555554321 2334455
Q ss_pred cEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccc
Q 043932 351 KILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYK 430 (1017)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 430 (1017)
++|++++|+++ + +| +..+++|+.|++++|++++.. ++.+++|+.|+++.
T Consensus 215 ~~L~Ls~N~l~-------------------------~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 215 TFLDCSSNKLT-------------------------E-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQ 263 (457)
T ss_dssp SEEECCSSCCS-------------------------C-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTT
T ss_pred CEEECcCCccc-------------------------c-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccC
Confidence 55555555444 2 12 456677788888888777653 34566677777665
Q ss_pred cccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCc
Q 043932 431 NVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSL 510 (1017)
Q Consensus 431 N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~ 510 (1017)
| +|+.|++++|++.+.+| ++.+++|+.|++++|+.. +.+
T Consensus 264 n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l-------------------------~~l 302 (457)
T 3bz5_A 264 T--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQL-------------------------YLL 302 (457)
T ss_dssp C--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTC-------------------------CEE
T ss_pred C--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCccc-------------------------cee
Confidence 4 35566777777766665 456677777777776655 344
Q ss_pred cccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccC
Q 043932 511 PLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLS 590 (1017)
Q Consensus 511 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 590 (1017)
|. ...+|+.|++++| ++|+.|+|++|+|++. + ++.+++|+.|++++|++++ ++
T Consensus 303 ~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~ 355 (457)
T 3bz5_A 303 DC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FS 355 (457)
T ss_dssp EC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CT
T ss_pred cc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------cc
Confidence 42 2345666666665 6899999999999985 3 9999999999999999996 24
Q ss_pred CCcEEEcccCCCcCcCCCCCCCCCCCcccccCcc
Q 043932 591 FLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNV 624 (1017)
Q Consensus 591 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 624 (1017)
.|..|++++|.++|. +.+..++.+.+..|.
T Consensus 356 ~L~~L~l~~n~l~g~----~~~~~l~~l~l~~N~ 385 (457)
T 3bz5_A 356 SVGKIPALNNNFEAE----GQTITMPKETLTNNS 385 (457)
T ss_dssp TGGGSSGGGTSEEEE----EEEEECCCBCCBTTB
T ss_pred ccccccccCCcEEec----ceeeecCccccccCc
Confidence 677788999999997 245567778888774
No 117
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-39 Score=374.92 Aligned_cols=291 Identities=21% Similarity=0.229 Sum_probs=206.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.++||+|+||.||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999999999999999997432 234578899999999999999999999987654444467
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999986 59999997653 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccc--------------cCCCcccccccCccccCcccc-cCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 862 LAKFLSSHQLDTAS--------------KTSSSSIGIKGTVGYVAPEYC-MGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
+|+........... .........+||+.|+|||++ .+..++.++||||+||++|||++|..||..
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 99876533211000 000123456899999999986 556799999999999999999986555543
Q ss_pred ccccC---------------------------ccHHHHHHhhcCc--h-hhhhccchhhHHHHhhcchhHHHhHHhHHHH
Q 043932 927 AFTEG---------------------------LTLHEFAKIALPE--K-VIEIVDPLLLIEVMANNSMIQEDIRAKTQEC 976 (1017)
Q Consensus 927 ~~~~~---------------------------~~~~~~~~~~~~~--~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~ 976 (1017)
..... ..+.........+ . +..+..+.......................+
T Consensus 255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T 3n9x_A 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334 (432)
T ss_dssp SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence 21110 0001111111100 0 1111111111000000000001111122345
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 977 LNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 977 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
++++.+++.+||+.||++|||+.|+++|
T Consensus 335 s~~~~dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 335 SDDGINLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 6788999999999999999999999986
No 118
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=372.11 Aligned_cols=288 Identities=21% Similarity=0.326 Sum_probs=200.6
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec--CcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK--QKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 778 (1017)
...++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--- 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--- 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---
Confidence 3457899999999999999999999999999999998533 2344567889999999997 999999999986532
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
....|+||||++ ++|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 256899999997 5999999763 688999999999999999999999 99999999999999999999999
Q ss_pred eccccccccccccccc-------------ccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCC
Q 043932 859 DFGLAKFLSSHQLDTA-------------SKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPT 924 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf 924 (1017)
|||+|+.+........ ...........||+.|+|||++.+ ..++.++||||+||++|||++|++||
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 9999986643111000 001122334689999999999977 57899999999999999999999999
Q ss_pred CcccccCccHHHHHHhh-cCch-hhhhccchhhHHHHhh----c-------chhHHHhHH------hHHHHHHHHHHHHh
Q 043932 925 DAAFTEGLTLHEFAKIA-LPEK-VIEIVDPLLLIEVMAN----N-------SMIQEDIRA------KTQECLNAIIRIGV 985 (1017)
Q Consensus 925 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~d~~l~~~~~~~----~-------~~~~~~~~~------~~~~~~~~l~~li~ 985 (1017)
.+..... .+....... .|.. ....+.......+... . ....+.... ....+++++.+++.
T Consensus 232 ~~~~~~~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 232 PGSSTMN-QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CCSSHHH-HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCCCHHH-HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 8653221 122221111 1111 0000000000000000 0 000000000 00134667899999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 043932 986 LCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 986 ~cl~~dP~~RPs~~evl~~ 1004 (1017)
+||+.||++|||+.|+++|
T Consensus 311 ~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HhhccCcccCCCHHHHhCC
Confidence 9999999999999999987
No 119
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.8e-40 Score=358.24 Aligned_cols=276 Identities=22% Similarity=0.299 Sum_probs=201.1
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
++|++.+.||+|+||+||+|++ .+++.||+|++..... ...+.+.+|++++++++||||+++++++... +..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-----KRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-----SCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-----CeE
Confidence 5799999999999999999999 5788999999864432 2346788999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++ +|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999976 99999876542 688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .........
T Consensus 147 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 217 (288)
T 1ob3_A 147 ARAFGIPV--------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRIL 217 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ccccCccc--------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHH
Confidence 98654221 111224689999999998764 58999999999999999999999997643221 111111111
Q ss_pred cCchhhhhccchhhHHHHhhcch-hHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSM-IQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.......+........+...... ............++++.+++.+||+.||++|||+.|+++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000000000000000000000 0000001112345678899999999999999999999875
No 120
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.7e-40 Score=356.66 Aligned_cols=263 Identities=29% Similarity=0.446 Sum_probs=198.7
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.++||+|+||+||+|++.. .||+|++..... ...+.+.+|++++++++||||+++++++..
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 91 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------ 91 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------
Confidence 345789999999999999999999753 499999875433 345778999999999999999999997532
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 163 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHASE-----TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGD 163 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CccEEEEEecCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEcc
Confidence 45789999999999999997654 3689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCccccc---CCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM---GSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
||++........ ........||+.|+|||++. +..++.++||||+|+++|||++|+.||............
T Consensus 164 fg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 237 (289)
T 3og7_A 164 FGLATEKSRWSG------SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237 (289)
T ss_dssp CC------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH
T ss_pred ceeccccccccc------cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence 999976542211 11122356899999999986 567888999999999999999999999764322111111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
.......... ......+++.+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus 238 ~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 238 VGRGSLSPDL-----------------------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHTSCCCCT-----------------------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hcccccCcch-----------------------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111111110 01112346778999999999999999999999999998865
No 121
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-39 Score=362.67 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=204.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.++||+|+||+||+|++..+++.||+|++... .....+.+.+|..+++.+ +||+|+++++++...
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----- 93 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----- 93 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC-----
Confidence 46899999999999999999999999999999999754 234456788999999988 799999999998664
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~D 164 (353)
T 2i0e_A 94 DRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIAD 164 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEe
Confidence 67899999999999999998653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 165 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~ 235 (353)
T 2i0e_A 165 FGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIME 235 (353)
T ss_dssp CTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred CCcccccccCC--------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHh
Confidence 99997532211 11233679999999999999999999999999999999999999997642210 1111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME-----MRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 1004 (1017)
... . .....++++.+++.+||+.||.+||+ +.|+++|
T Consensus 236 ~~~---------------------~-------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 236 HNV---------------------A-------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCC---------------------C-------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCC---------------------C-------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 000 0 00123567889999999999999995 5777765
No 122
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.3e-39 Score=361.95 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=206.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... +
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN-----S 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-----C
Confidence 468999999999999999999999999999999997432 23456788999999999999999999998754 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 7899999999999999998653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .........
T Consensus 186 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~ 253 (350)
T 1rdq_E 186 GFAKRVKGR-----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSG 253 (350)
T ss_dssp TTCEECSSC-----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC
T ss_pred ccceeccCC-----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcC
Confidence 999865321 12357999999999999989999999999999999999999999754221 001111110
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME-----MRDVVAKL 1005 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L 1005 (1017)
... ....+++.+.+++.+||+.||.+||+ +.|+++|-
T Consensus 254 ~~~----------------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 254 KVR----------------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp CCC----------------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCC----------------------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 000 00123567889999999999999998 88888764
No 123
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.3e-39 Score=364.62 Aligned_cols=289 Identities=20% Similarity=0.235 Sum_probs=214.6
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
+.....++|++.++||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 100 (364)
T 3qyz_A 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE 100 (364)
T ss_dssp CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred EeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence 333445789999999999999999999999999999999975433 3347788999999999999999999998766545
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
.....++||||+++ +|.+++... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 101 ~~~~~~iv~e~~~~-~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 169 (364)
T 3qyz_A 101 QMKDVYIVQDLMET-DLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKI 169 (364)
T ss_dssp TCCCEEEEEECCSE-EHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred ccceEEEEEcccCc-CHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEE
Confidence 55678999999975 999998754 589999999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
+|||++......... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....
T Consensus 170 ~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~ 243 (364)
T 3qyz_A 170 CDFGLARVADPDHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNH 243 (364)
T ss_dssp CCCTTCEECCGGGCB-----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHH
T ss_pred EeCcceEecCCCCCc-----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHH
Confidence 999999876533211 111233579999999998755 458999999999999999999999997653332 2222
Q ss_pred HHHhhcCch---hhhhccchhhHHHHhh-cchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 937 FAKIALPEK---VIEIVDPLLLIEVMAN-NSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 937 ~~~~~~~~~---~~~~~d~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
......... +....+.. ...+... ..............+++++.+++.+||+.||++|||+.|+++|-
T Consensus 244 i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 244 ILGILGSPSQEDLNCIINLK-ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp HHHHHCSCCHHHHHTCCCHH-HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred HHHHhCCCCHHHHHHhhhhh-HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 222111111 11111100 0000000 00000000111223456789999999999999999999999863
No 124
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.1e-39 Score=358.87 Aligned_cols=268 Identities=24% Similarity=0.370 Sum_probs=213.4
Q ss_pred HhhccccccCcccccCCceEEEEEe-----CCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSID 775 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1017)
...++|.+.+.||+|+||.||+|++ ..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~- 98 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD- 98 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC-
Confidence 3467899999999999999999998 3456899999997543 33457789999999999999999999998654
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCC------------------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDH------------------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPM 837 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 837 (1017)
+..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|
T Consensus 99 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i 171 (314)
T 2ivs_A 99 ----GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KL 171 (314)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ----CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CC
Confidence 5689999999999999999875421 0123589999999999999999999999 99
Q ss_pred eeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHH
Q 043932 838 VHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLEL 917 (1017)
Q Consensus 838 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 917 (1017)
+||||||+||+++.++.+||+|||++.......... ......+|+.|+|||++.+..++.++||||+||++|||
T Consensus 172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 245 (314)
T 2ivs_A 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245 (314)
T ss_dssp ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE------CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred cccccchheEEEcCCCCEEEccccccccccccccce------eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHH
Confidence 999999999999999999999999998664332111 11224578899999999988899999999999999999
Q ss_pred Hh-CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC
Q 043932 918 FT-GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM 996 (1017)
Q Consensus 918 lt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 996 (1017)
++ |+.||....... ........... .....+++.+.+++.+||+.||++||
T Consensus 246 ~t~g~~p~~~~~~~~--~~~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~Rp 297 (314)
T 2ivs_A 246 VTLGGNPYPGIPPER--LFNLLKTGHRM--------------------------ERPDNCSEEMYRLMLQCWKQEPDKRP 297 (314)
T ss_dssp HTTSCCSSTTCCGGG--HHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhCCCCCCCCCCHHH--HHHHhhcCCcC--------------------------CCCccCCHHHHHHHHHHccCChhhCc
Confidence 99 999997643221 11111110000 00112356789999999999999999
Q ss_pred CHHHHHHHHhhcccc
Q 043932 997 EMRDVVAKLCHTRET 1011 (1017)
Q Consensus 997 s~~evl~~L~~~~~~ 1011 (1017)
++.|++++|+++.++
T Consensus 298 s~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 298 VFADISKDLEKMMVK 312 (314)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999998764
No 125
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=373.56 Aligned_cols=285 Identities=20% Similarity=0.248 Sum_probs=216.4
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCee
Confidence 468999999999999999999999999999999997443 234577889999999999999999999986542 2467
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe----CCCCCeEEe
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDMVSHVG 858 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 858 (1017)
++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCCHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEe
Confidence 999999999999999976531 12489999999999999999999999 99999999999999 778889999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC--------CCcCccccchhHHHHHHHHHhCCCCCCccccc
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG--------SEASMTGDVYSFGILLLELFTGRRPTDAAFTE 930 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~pf~~~~~~ 930 (1017)
|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 159 DFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp CGGGCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred cCCCceEccCCC---------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 999998664322 1122569999999999865 46788999999999999999999999754333
Q ss_pred CccHHHHHHhh--cCchhhhhccchhhHHHHhhcchhH---HHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 931 GLTLHEFAKIA--LPEKVIEIVDPLLLIEVMANNSMIQ---EDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 931 ~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
......+.... .+......+.... .....+. +.........+..+.+++.+||+.||++||++.|+++.+
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l 304 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAE-----NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECST-----TCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheecc-----CCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHH
Confidence 22222222211 1111000000000 0000000 000112345677899999999999999999999999999
Q ss_pred hhcccc
Q 043932 1006 CHTRET 1011 (1017)
Q Consensus 1006 ~~~~~~ 1011 (1017)
+++.++
T Consensus 305 ~~il~~ 310 (396)
T 4eut_A 305 SDILHR 310 (396)
T ss_dssp HHHHTC
T ss_pred HHHhhc
Confidence 887654
No 126
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.6e-39 Score=357.78 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=207.6
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc------hHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 87 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR-- 87 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 356899999999999999999999999999999999754321 357789999999999999999999998654
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC---
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--- 853 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 853 (1017)
+..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 88 ---~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~ 155 (321)
T 2a2a_A 88 ---TDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPI 155 (321)
T ss_dssp ---SEEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSS
T ss_pred ---CEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCc
Confidence 67899999999999999997653 689999999999999999999999 999999999999999888
Q ss_pred -CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc
Q 043932 854 -VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL 932 (1017)
Q Consensus 854 -~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~ 932 (1017)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.......
T Consensus 156 ~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~- 225 (321)
T 2a2a_A 156 PHIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE- 225 (321)
T ss_dssp CCEEECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-
T ss_pred CCEEEccCccceecCccc---------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-
Confidence 79999999998654321 1123468999999999999899999999999999999999999997642211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
........... .+ .......++.+.+++.+||+.||++|||+.|++++-
T Consensus 226 ~~~~i~~~~~~------~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 226 TLANITSVSYD------FD------------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp HHHHHHTTCCC------CC------------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred HHHHHHhcccc------cC------------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 01110000000 00 011123356789999999999999999999999863
No 127
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.6e-39 Score=361.79 Aligned_cols=280 Identities=23% Similarity=0.313 Sum_probs=213.9
Q ss_pred hccccccCcccccCCceEEEEE----eCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++... +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CC
Confidence 3689999999999999999999 4668999999999876666667899999999999999999999988643 23
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~D 170 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIAD 170 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEeecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcc
Confidence 67899999999999999998643 2689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++........... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ...
T Consensus 171 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-----~~~ 240 (327)
T 3lxl_A 171 FGLAKLLPLDKDYYV-----VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-----LRM 240 (327)
T ss_dssp GGGCEECCTTCSEEE-----CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-----HHH
T ss_pred cccceecccCCccce-----eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh-----hhh
Confidence 999987643321111 1122468889999999998889999999999999999999999986532210 000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.......... ... ........ .......+++.+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 241 ~~~~~~~~~~--~~~-~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 241 MGCERDVPAL--SRL-LELLEEGQ-----RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CC----CCHH--HHH-HHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cccccccccH--HHH-HHHhhccc-----CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 0000000000 000 00000000 00112244678999999999999999999999999999987644
No 128
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.9e-40 Score=356.89 Aligned_cols=262 Identities=21% Similarity=0.364 Sum_probs=200.6
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCC---cEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
....++|++.+.||+|+||.||+|++..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--- 87 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--- 87 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc---
Confidence 33457899999999999999999998643 5679999986433 3345678999999999999999999998732
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeE
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSH 856 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 856 (1017)
+..++||||+++++|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 88 ---~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 156 (281)
T 1mp8_A 88 ---NPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 156 (281)
T ss_dssp ---SSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEE
T ss_pred ---CccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEE
Confidence 457899999999999999986542 689999999999999999999999 999999999999999999999
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLH 935 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~ 935 (1017)
|+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||......+ ...
T Consensus 157 l~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-~~~ 228 (281)
T 1mp8_A 157 LGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIG 228 (281)
T ss_dssp ECC--------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHH
T ss_pred ECccccccccCccccc-------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-HHH
Confidence 9999999876432211 1112356889999999988889999999999999999997 999997643221 111
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
........ .....+++.+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 229 ~i~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 229 RIENGERL---------------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHTTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCC---------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11100000 01112356789999999999999999999999999998764
No 129
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=363.60 Aligned_cols=274 Identities=23% Similarity=0.343 Sum_probs=211.0
Q ss_pred HHHhhccccccCcccccCCceEEEEEe-----CCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhc-CCCCceeeeeeee
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNI-RHRNLIKIITICS 772 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 772 (1017)
+....++|++.+.||+|+||.||+|++ ..+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 344567899999999999999999997 3467889999997442 33457889999999999 8999999999986
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCCc-----------------cccccCHHHHHHHHHHHHHHHHHHhhCCCC
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDHL-----------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQP 835 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 835 (1017)
.. +..++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||++
T Consensus 120 ~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 191 (344)
T 1rjb_A 120 LS-----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--- 191 (344)
T ss_dssp SS-----SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eC-----CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 54 56899999999999999998754211 113479999999999999999999999
Q ss_pred CceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHH
Q 043932 836 PMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLL 915 (1017)
Q Consensus 836 ~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ 915 (1017)
+|+||||||+||+++.++.+||+|||++......... .......||+.|+|||++.+..++.++|||||||++|
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 265 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccc------eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHH
Confidence 9999999999999999999999999999866432211 1112345788999999998888999999999999999
Q ss_pred HHHh-CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCC
Q 043932 916 ELFT-GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFE 994 (1017)
Q Consensus 916 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 994 (1017)
||++ |..||....... ............. ....+++++.+++.+||+.||.+
T Consensus 266 el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~ 318 (344)
T 1rjb_A 266 EIFSLGVNPYPGIPVDA-NFYKLIQNGFKMD--------------------------QPFYATEEIYIIMQSCWAFDSRK 318 (344)
T ss_dssp HHTTTSCCSSTTCCCSH-HHHHHHHTTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHcCCCCCcccCCcHH-HHHHHHhcCCCCC--------------------------CCCCCCHHHHHHHHHHcCCCchh
Confidence 9998 999997643221 1111111110000 01123567899999999999999
Q ss_pred CCCHHHHHHHHhhccccccc
Q 043932 995 RMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 995 RPs~~evl~~L~~~~~~~~~ 1014 (1017)
|||+.|++++|+.+.+...+
T Consensus 319 Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 319 RPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp SCCHHHHHHHHHHHC-----
T ss_pred CcCHHHHHHHHHHHHHHHHH
Confidence 99999999999998876543
No 130
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.5e-39 Score=355.83 Aligned_cols=277 Identities=22% Similarity=0.282 Sum_probs=203.1
Q ss_pred hcccccc-CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++. ++||+|+||+||+|++..+++.||||++........+.+.+|+++++++ +||||+++++++... +.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-----~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-----DR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-----CE
Confidence 4578885 7899999999999999989999999999866666668899999999985 799999999998765 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC---eEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---SHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 858 (1017)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~ 156 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKIC 156 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred EEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEE
Confidence 899999999999999998653 689999999999999999999999 9999999999999998776 9999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC-----CCcCccccchhHHHHHHHHHhCCCCCCcccccCcc
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-----SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT 933 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~ 933 (1017)
|||++............ .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..
T Consensus 157 Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 235 (316)
T 2ac3_A 157 DFDLGSGIKLNGDCSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235 (316)
T ss_dssp CTTCCC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred EccCccccccCCccccc-cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence 99999765422211100 1111223469999999999875 45889999999999999999999999765432211
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
..... ..+... ..+............ ......+++++.+++.+||+.||++|||+.|+++|-
T Consensus 236 ~~~~~--~~~~~~-----~~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 236 WDRGE--ACPACQ-----NMLFESIQEGKYEFP---DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp C------CCHHHH-----HHHHHHHHHCCCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred ccccc--cchhHH-----HHHHHHHhccCcccC---chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 00000 000000 000000000000000 011123466789999999999999999999999863
No 131
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=9.6e-39 Score=350.38 Aligned_cols=271 Identities=22% Similarity=0.290 Sum_probs=213.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++..... .+.+.+|+.+++.++|++++..+.++... .+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCC----CCce
Confidence 35789999999999999999999998999999999875433 25688999999999998888777766443 2568
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 859 (1017)
++||||+ +++|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 151 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred EEEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEee
Confidence 9999999 8899999985442 689999999999999999999999 99999999999999 4889999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccC--ccHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEG--LTLHEF 937 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~--~~~~~~ 937 (1017)
||++............ .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 152 fg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 3uzp_A 152 FGLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CTTCEECBCTTTCCBC-CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred CCCccccccccccccc-ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhh
Confidence 9999876543321111 1112234679999999999999899999999999999999999999998643221 111111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
....... ........+++++.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 231 ~~~~~~~-----------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 231 SEKKMST-----------------------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHS-----------------------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cccccCC-----------------------chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 1100000 001111234677999999999999999999999999999987654
No 132
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=371.05 Aligned_cols=264 Identities=21% Similarity=0.246 Sum_probs=208.0
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeec
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSS 773 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1017)
+.+.....++|++.++||+|+||+||+|+++.+++.||+|++.... ....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3445556789999999999999999999999999999999997432 2234567899999999999999999999876
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
. +..|+||||+++|+|.+++...+ ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 133 ~-----~~~~lVmE~~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 133 E-----NYLYLVMEYYVGGDLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp S-----SEEEEEECCCCSCBHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred C-----CEEEEEEcCCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 5 67899999999999999998643 2689999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCccccc-------CCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM-------GSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
++||+|||+++....... .......||+.|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 200 ~vkL~DFGla~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp CEEECCCTTCEECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CEEEeechhheeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 999999999986643221 1112357999999999987 35689999999999999999999999976
Q ss_pred ccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 043932 927 AFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFER---MEMRDVVA 1003 (1017)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 1003 (1017)
..... ......... ..... +.....+++++.+++.+||+ +|.+| |+++|+++
T Consensus 273 ~~~~~-~~~~i~~~~-----~~~~~------------------p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 273 DSTAE-TYGKIVHYK-----EHLSL------------------PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp SSHHH-HHHHHHTHH-----HHCCC------------------C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCHHH-HHHHHHhcc-----cCcCC------------------CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 42211 011110000 00000 00112246678999999999 99998 58999987
Q ss_pred HH
Q 043932 1004 KL 1005 (1017)
Q Consensus 1004 ~L 1005 (1017)
|=
T Consensus 328 Hp 329 (412)
T 2vd5_A 328 HP 329 (412)
T ss_dssp SG
T ss_pred CC
Confidence 63
No 133
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.4e-39 Score=353.59 Aligned_cols=265 Identities=23% Similarity=0.440 Sum_probs=216.3
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
++....++|++.+.||+|+||+||+|.+..++..||+|++... ....+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 81 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE---- 81 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC----
Confidence 4445677899999999999999999999989999999999743 34457889999999999999999999998654
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 82 -~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 82 -PPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred -CCEEEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 568999999999999999987532 3689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||.+........ .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||...... .....
T Consensus 154 Dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~ 224 (288)
T 3kfa_A 154 DFGLSRLMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYEL 224 (288)
T ss_dssp CCCGGGTSCSSSS-------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH
T ss_pred cCccceeccCCcc-------ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 9999986653321 11122457889999999988899999999999999999999 99999764322 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
....... .....+++.+.+++.+|++.||.+|||+.|+++.|+.+.+.
T Consensus 225 ~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 225 LEKDYRM--------------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccCCC--------------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1110000 00112356789999999999999999999999999987653
No 134
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.2e-39 Score=350.55 Aligned_cols=271 Identities=22% Similarity=0.288 Sum_probs=209.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||+||+|++..+++.||||++...... +.+.+|+++++.++|++++..++++... .+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCC----CCce
Confidence 457899999999999999999999999999999987644322 4578899999999998888887776443 2678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 859 (1017)
++||||+ +++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 8899999986542 689999999999999999999999 99999999999999 7889999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCc--cHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL--TLHEF 937 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~--~~~~~ 937 (1017)
||+++........... .........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....
T Consensus 152 fg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CTTCEECBCTTTCCBC-CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred CccceeccCcccCccC-CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence 9999876543321111 11122346799999999999999999999999999999999999999976433211 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.....+ .........+++++.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 231 ~~~~~~-----------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 231 SEKKMS-----------------------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHH-----------------------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hccccc-----------------------chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 110000 0001111233678999999999999999999999999999987653
No 135
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=352.97 Aligned_cols=259 Identities=27% Similarity=0.407 Sum_probs=201.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||+||+|++. ++.||+|++.. ....+.+.+|++++++++||||+++++++.. ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 457899999999999999999985 67899999863 3345788999999999999999999998752 368
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC-eEEeeccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-SHVGDFGL 862 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfG~ 862 (1017)
+||||+++|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred EEEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence 99999999999999986542 235788999999999999999999932229999999999999998886 79999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhc
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..................
T Consensus 153 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 221 (307)
T 2eva_A 153 ACDIQTHM-----------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221 (307)
T ss_dssp -----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC
T ss_pred cccccccc-----------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC
Confidence 97543211 1235899999999999989999999999999999999999999753222111110000000
Q ss_pred CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccc
Q 043932 943 PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFF 1013 (1017)
Q Consensus 943 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1013 (1017)
.. .....+++.+.+++.+||+.||++|||+.|++++|+.+.+.+.
T Consensus 222 ~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 222 RP--------------------------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp CC--------------------------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred CC--------------------------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 0011235678899999999999999999999999999887654
No 136
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-39 Score=359.52 Aligned_cols=259 Identities=24% Similarity=0.371 Sum_probs=204.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEE----EEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMI----VAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
.++|++.++||+|+||+||+|++..+++. ||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG----- 86 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----
Confidence 35799999999999999999999877765 7777765332 2334567789999999999999999998842
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 -~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~ 157 (325)
T 3kex_A 87 -SSLQLVTQYLPLGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVA 157 (325)
T ss_dssp -SSEEEEEECCTTCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEEC
T ss_pred -CccEEEEEeCCCCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEEC
Confidence 45789999999999999998653 2688899999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||+++........ .......||..|+|||++.+..++.++||||+||++|||++ |+.||...... .....
T Consensus 158 Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~ 229 (325)
T 3kex_A 158 DFGVADLLPPDDKQ------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDL 229 (325)
T ss_dssp SCSGGGGSCCCTTC------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHH
T ss_pred CCCcccccCccccc------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHH
Confidence 99999876543211 11223567889999999998899999999999999999999 99999764322 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
........ ....++..+.+++.+||+.||.+||++.|++++|+.+..
T Consensus 230 ~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 230 LEKGERLA--------------------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp HHTTCBCC--------------------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHcCCCCC--------------------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11100000 001124457889999999999999999999999998764
No 137
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=364.25 Aligned_cols=278 Identities=21% Similarity=0.284 Sum_probs=203.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 780 (1017)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+++.+|+++++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 468999999999999999999999999999999986432 2335678899999999999999999999865422 1224
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+ +++|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 569999999 77999999763 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..... .+.....
T Consensus 173 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 240 (367)
T 1cm8_A 173 GLARQADSE-----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK 240 (367)
T ss_dssp TTCEECCSS-----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred ecccccccc-----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999865321 123578999999999877 679999999999999999999999997643221 1222221
Q ss_pred hhc--CchhhhhccchhhHHHHhhcc-hhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IAL--PEKVIEIVDPLLLIEVMANNS-MIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~--~~~~~~~~d~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... +......+.......+..... ............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 111 111111111111111111000 00001111223346778999999999999999999999986
No 138
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=354.56 Aligned_cols=281 Identities=24% Similarity=0.328 Sum_probs=208.6
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc--CCCCceeeeeeeecCC
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI--RHRNLIKIITICSSID 775 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~ 775 (1017)
.......++|++.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++....
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 334455679999999999999999999985 8899999986432 23445566666554 8999999999986542
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC-----CCCceeecCCCCceEeC
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC-----QPPMVHGDLKPSNVLLD 850 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~ 850 (1017)
. .....++||||+++|+|.++++.. .+++.+++.++.|++.||+|||++. .++|+||||||+||+++
T Consensus 105 ~-~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 105 G-SWTQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp G-GGCEEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred C-CCCceEEEEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 2 225689999999999999999754 5899999999999999999999762 34899999999999999
Q ss_pred CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCcc------ccchhHHHHHHHHHhC----
Q 043932 851 HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMT------GDVYSFGILLLELFTG---- 920 (1017)
Q Consensus 851 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg---- 920 (1017)
.++.+||+|||+++.......... .......||+.|+|||++.+..++.+ +|||||||++|||++|
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~ 252 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVD----IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252 (337)
T ss_dssp TTSCEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred CCCCEEEEeCCCceeecccccccc----CCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence 999999999999976643321111 11123579999999999987766554 9999999999999999
Q ss_pred ------CCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCC
Q 043932 921 ------RRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFE 994 (1017)
Q Consensus 921 ------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 994 (1017)
+.||........................... ......++++++.+++.+||+.||++
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~ 315 (337)
T 3mdy_A 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP-----------------NRWSSDECLRQMGKLMTECWAHNPAS 315 (337)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC-----------------GGGGGSHHHHHHHHHHHHHSCSSGGG
T ss_pred cccccccccHhhhcCCCCchhhhHHHHhhhccCcccc-----------------ccchhhHHHHHHHHHHHHhhhhChhh
Confidence 5565543333333322222211111000000 01112356888999999999999999
Q ss_pred CCCHHHHHHHHhhccccc
Q 043932 995 RMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 995 RPs~~evl~~L~~~~~~~ 1012 (1017)
|||+.||+++|+.+.++.
T Consensus 316 Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 316 RLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHhhc
Confidence 999999999999988753
No 139
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-39 Score=357.86 Aligned_cols=272 Identities=22% Similarity=0.363 Sum_probs=215.3
Q ss_pred HHHhhccccccCcccccCCceEEEEEe-----CCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeeeeeee
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKIITICS 772 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 772 (1017)
+....++|++.+.||+|+||+||+|++ ..+++.||+|++..... ...+.+.+|+++++++ +||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 344467899999999999999999985 45788999999975433 3457789999999999 9999999999986
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCC------------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceee
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDH------------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHG 840 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 840 (1017)
.. +..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||
T Consensus 98 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~ 169 (313)
T 1t46_A 98 IG-----GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 169 (313)
T ss_dssp SS-----SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred cC-----CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence 54 5679999999999999999876421 1123589999999999999999999999 99999
Q ss_pred cCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-
Q 043932 841 DLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT- 919 (1017)
Q Consensus 841 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt- 919 (1017)
||||+||+++.++.+||+|||++.......... ......||+.|+|||++.+..++.++||||+|+++|||++
T Consensus 170 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 243 (313)
T 1t46_A 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243 (313)
T ss_dssp CCSGGGEEEETTTEEEECCCGGGSCTTSCTTSE------ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCccceEEEcCCCCEEEccccccccccccccce------eccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998665332111 1122457889999999988899999999999999999999
Q ss_pred CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 043932 920 GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMR 999 (1017)
Q Consensus 920 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 999 (1017)
|+.||........ ........... .....+++.+.+++.+||+.||.+|||+.
T Consensus 244 g~~p~~~~~~~~~-~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 296 (313)
T 1t46_A 244 GSSPYPGMPVDSK-FYKMIKEGFRM--------------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFK 296 (313)
T ss_dssp TCCSSTTCCSSHH-HHHHHHHTCCC--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCcccchhH-HHHHhccCCCC--------------------------CCcccCCHHHHHHHHHHcCCCchhCcCHH
Confidence 9999976432211 11111111000 00112356789999999999999999999
Q ss_pred HHHHHHhhccccc
Q 043932 1000 DVVAKLCHTRETF 1012 (1017)
Q Consensus 1000 evl~~L~~~~~~~ 1012 (1017)
|++++|+++.++.
T Consensus 297 ell~~L~~~~~~~ 309 (313)
T 1t46_A 297 QIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887653
No 140
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-39 Score=364.15 Aligned_cols=269 Identities=22% Similarity=0.253 Sum_probs=205.9
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec-----CcchHHHHHHHHHHHHhcCCCCceeeeeeeec
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-----QKGAFKSFMAECKALRNIRHRNLIKIITICSS 773 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1017)
++....++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4456678999999999999999999999999999999998743 23456789999999999999999999999865
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCC----------------------------------ccccccCHHHHHHHH
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDH----------------------------------LEVCKLTLIQRVNIA 819 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------~~~~~l~~~~~~~i~ 819 (1017)
. +..++||||+++|+|.+++...... .....+++..++.++
T Consensus 100 ~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 100 E-----QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp S-----SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred C-----CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 4 6789999999999999998631110 001234677889999
Q ss_pred HHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC--CeEEeecccccccccccccccccCCCcccccccCccccCccccc
Q 043932 820 IDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM--VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM 897 (1017)
Q Consensus 820 ~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 897 (1017)
.||+.||+|||++ +|+||||||+||+++.++ .+||+|||+++.+....... ........||+.|+|||++.
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE----YYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHT
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccc----cccccccCCCccccCchhhc
Confidence 9999999999999 999999999999998776 89999999998654322111 11122356999999999986
Q ss_pred C--CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHH
Q 043932 898 G--SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQE 975 (1017)
Q Consensus 898 ~--~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~ 975 (1017)
+ ..++.++|||||||++|||++|+.||....... ............ . ......
T Consensus 248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~-----~-------------------~~~~~~ 302 (345)
T 3hko_A 248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCF-----E-------------------NPNYNV 302 (345)
T ss_dssp CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCT-----T-------------------SGGGGG
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhccccc-----C-------------------Cccccc
Confidence 5 578999999999999999999999997643221 111111100000 0 001112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 976 CLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 976 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+++.+.+++.+||+.||.+||++.|++++
T Consensus 303 ~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 303 LSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 35678999999999999999999999986
No 141
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=361.43 Aligned_cols=276 Identities=17% Similarity=0.231 Sum_probs=206.6
Q ss_pred hccccccCcccccCCceEEEEEeCC---CcEEEEEEEeeecCcc-----------hHHHHHHHHHHHHhcCCCCceeeee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQKG-----------AFKSFMAECKALRNIRHRNLIKIIT 769 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1017)
.++|++.+.||+|+||+||+|++.. ++..||+|++...... ..+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4689999999999999999999987 7889999998754321 1234667888999999999999999
Q ss_pred eeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe
Q 043932 770 ICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (1017)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 849 (1017)
++.... .+....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 116 ~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 116 SGLTEF-KGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEES-SSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred cccccc-CCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 987632 2347889999999 899999997653 789999999999999999999999 99999999999999
Q ss_pred CCCC--CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 850 DHDM--VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 850 ~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
+.++ .+||+|||+++.+........ ..........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 263 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQ-YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN 263 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCC-CCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred ccCCCCcEEEEeCCCceeccccccccc-chhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 8887 999999999987654321111 1112223467999999999999989999999999999999999999999653
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHh--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAK--TQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
............. .... +. ...... ...+++++.+++.+||+.||++||++.||++.|
T Consensus 264 ~~~~~~~~~~~~~-~~~~----~~---------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 264 LKDPVAVQTAKTN-LLDE----LP---------------QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp TTCHHHHHHHHHH-HHHT----TT---------------HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred ccccHHHHHHHHh-hccc----cc---------------HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 2221111111110 0000 00 000000 013466899999999999999999999999999
Q ss_pred hhcccc
Q 043932 1006 CHTRET 1011 (1017)
Q Consensus 1006 ~~~~~~ 1011 (1017)
+.+...
T Consensus 324 ~~~~~~ 329 (345)
T 2v62_A 324 NPHGIP 329 (345)
T ss_dssp CTTCCC
T ss_pred hccCCc
Confidence 987643
No 142
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.9e-39 Score=363.91 Aligned_cols=287 Identities=23% Similarity=0.258 Sum_probs=213.0
Q ss_pred CCCcCHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-----CCCcee
Q 043932 692 FPTVSYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-----HRNLIK 766 (1017)
Q Consensus 692 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 766 (1017)
...+++.+.....++|++.++||+|+||+||+|++..+++.||||++... ....+.+..|+++++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34556666667788999999999999999999999999999999998632 233466778999999986 999999
Q ss_pred eeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCc
Q 043932 767 IITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSN 846 (1017)
Q Consensus 767 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 846 (1017)
+++++... +..++||||+ +++|.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+|
T Consensus 101 ~~~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 167 (360)
T 3llt_A 101 YHGKFMYY-----DHMCLIFEPL-GPSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPEN 167 (360)
T ss_dssp EEEEEEET-----TEEEEEECCC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccceeeEC-----CeeEEEEcCC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCccc
Confidence 99998765 6789999999 8899999987542 2589999999999999999999999 99999999999
Q ss_pred eEeCC-------------------------CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCc
Q 043932 847 VLLDH-------------------------DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA 901 (1017)
Q Consensus 847 Ill~~-------------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 901 (1017)
|+++. ++.+||+|||+|+..... .....||+.|+|||++.+..+
T Consensus 168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCC
T ss_pred EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCC
Confidence 99975 789999999999754321 123568999999999999999
Q ss_pred CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh--cCchhhhhccchhhHHHH----------hhcch-----
Q 043932 902 SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA--LPEKVIEIVDPLLLIEVM----------ANNSM----- 964 (1017)
Q Consensus 902 ~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~----------~~~~~----- 964 (1017)
+.++||||+||++|||++|+.||....... ......... .+..............+. .....
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 999999999999999999999997643221 111111111 111110000000000000 00000
Q ss_pred -hHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 965 -IQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 965 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.............+.+.+++.+||+.||++|||+.|+++|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000111123678899999999999999999999875
No 143
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=359.70 Aligned_cols=280 Identities=20% Similarity=0.233 Sum_probs=215.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.... ......
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCcee
Confidence 4578999999999999999999999899999999998766666788999999999999999999999986431 223578
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKD--KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred EEEEEeCCCCcHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 999999999999999986321 123689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccc-cCCCcccccccCccccCcccccCCC---cCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 863 AKFLSSHQLDTAS-KTSSSSIGIKGTVGYVAPEYCMGSE---ASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 863 a~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
+............ ..........||+.|+|||++.+.. ++.++||||||+++|||++|+.||..............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8765321110000 0000112245799999999987653 68999999999999999999999965332222221111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1014 (1017)
...... .....+++.+.+++.+||+.||.+|||+.|++++|+.+....-+
T Consensus 261 ~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 261 QNQLSI--------------------------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp HCC--C--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred hccCCC--------------------------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 110000 00112356789999999999999999999999999998765443
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=357.87 Aligned_cols=278 Identities=21% Similarity=0.279 Sum_probs=202.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++... +.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK-----RR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC-----Ce
Confidence 3589999999999999999999999999999999865433 2346678999999999999999999998765 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp EEEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 899999999999999887553 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
.+........ ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......+. .......
T Consensus 148 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~ 218 (311)
T 4agu_A 148 FARLLTGPSD--------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKT 218 (311)
T ss_dssp TCEECC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CchhccCccc--------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Confidence 9986542211 1123468999999999876 5689999999999999999999999976433211 1111111
Q ss_pred h--cCchhhhhc-cchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 A--LPEKVIEIV-DPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~--~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
. ..+...... .........................+++.+.+++.+||+.||++|||++|+++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred hcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 000000000 000000000000000000011122456678999999999999999999999976
No 145
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.6e-39 Score=348.82 Aligned_cols=256 Identities=23% Similarity=0.334 Sum_probs=205.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||+||+|++. ++.||+|++.... ....+.+.+|+.++++++||||+++++++.... .+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence 468999999999999999999995 7889999997553 234567899999999999999999999986542 256
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeCCCCCeEEee
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.++++|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 7999999999999999986542 3589999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCc---cccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASM---TGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
||++..... ....||+.|+|||++.+..++. ++||||+||++|||++|+.||......... ..
T Consensus 157 ~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~ 222 (271)
T 3kmu_A 157 ADVKFSFQS-------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG-MK 222 (271)
T ss_dssp GGSCCTTSC-------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH-HH
T ss_pred ccceeeecc-------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH-HH
Confidence 998754221 1246899999999998765544 799999999999999999999754221110 00
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
........ .....+++.+.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 223 ~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 223 VALEGLRP--------------------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp HHHSCCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred HHhcCCCC--------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 00000000 00112356789999999999999999999999999998763
No 146
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=364.11 Aligned_cols=269 Identities=25% Similarity=0.373 Sum_probs=213.6
Q ss_pred hhccccccCcccccCCceEEEEEeC-------CCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeeeeeeec
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILG-------EDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKIITICSS 773 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 773 (1017)
..++|.+.++||+|+||+||+|++. ..+..||||++..... ...+++.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 4578999999999999999999974 3447899999975432 3457788999999999 89999999999865
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 843 (1017)
. +..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 147 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 218 (382)
T 3tt0_A 147 D-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 218 (382)
T ss_dssp S-----SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCC
T ss_pred C-----CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCC
Confidence 4 5689999999999999999875421 1123689999999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCC
Q 043932 844 PSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRR 922 (1017)
Q Consensus 844 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~ 922 (1017)
|+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus 219 p~NIll~~~~~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~ 292 (382)
T 3tt0_A 219 ARNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292 (382)
T ss_dssp GGGEEECTTCCEEECSCSCCCCSSCCCTT------CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cceEEEcCCCcEEEcccCccccccccccc------ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999866432211 11222457889999999999999999999999999999999 999
Q ss_pred CCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 043932 923 PTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV 1002 (1017)
Q Consensus 923 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1002 (1017)
||...... ............ .....+++++.+++.+||+.||++|||+.||+
T Consensus 293 p~~~~~~~--~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 344 (382)
T 3tt0_A 293 PYPGVPVE--ELFKLLKEGHRM--------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344 (382)
T ss_dssp SSTTCCHH--HHHHHHHTTCCC--------------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCCHH--HHHHHHHcCCCC--------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 99754221 011111100000 00112356789999999999999999999999
Q ss_pred HHHhhcccccc
Q 043932 1003 AKLCHTRETFF 1013 (1017)
Q Consensus 1003 ~~L~~~~~~~~ 1013 (1017)
++|+.+.+...
T Consensus 345 ~~L~~~~~~~~ 355 (382)
T 3tt0_A 345 EDLDRIVALTS 355 (382)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHHh
Confidence 99999876543
No 147
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-39 Score=372.86 Aligned_cols=249 Identities=26% Similarity=0.392 Sum_probs=205.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++... +
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-----~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----S 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----C
Confidence 468999999999999999999999999999999997442 23456789999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 7899999999999999997653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|++....... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... .......
T Consensus 161 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~ 230 (476)
T 2y94_A 161 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICD 230 (476)
T ss_dssp SSCEECCTTC---------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHT
T ss_pred cchhhccccc---------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhc
Confidence 9998664322 1123569999999999988765 789999999999999999999997642210 0111100
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.... ....+++.+.+++.+||+.||++|||+.|+++|
T Consensus 231 ~~~~----------------------------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 231 GIFY----------------------------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TCCC----------------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCcC----------------------------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0000 001124568899999999999999999999985
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.1e-39 Score=359.56 Aligned_cols=255 Identities=20% Similarity=0.260 Sum_probs=184.2
Q ss_pred ccccc---cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCCCc
Q 043932 705 SEFAS---SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 705 ~~y~~---~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 780 (1017)
.+|++ .++||+|+||+||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++... .
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~ 79 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQ-----L 79 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC-----C
Confidence 34554 47899999999999999999999999998643 3466788999999996 99999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC---CeEE
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---VSHV 857 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 857 (1017)
..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEE
T ss_pred EEEEEEEccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEE
Confidence 7899999999999999998754 689999999999999999999999 999999999999998766 8999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccC--ccHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEG--LTLH 935 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~--~~~~ 935 (1017)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....
T Consensus 151 ~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 222 (325)
T 3kn6_A 151 IDFGFARLKPPDN--------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222 (325)
T ss_dssp CCCTTCEECCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH
T ss_pred eccccceecCCCC--------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH
Confidence 9999998654322 11123468999999999999899999999999999999999999997643211 1111
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+......... ... .......+++++.+++.+||+.||.+|||+.|++++
T Consensus 223 ~~~~~i~~~~-----------------~~~---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 223 EIMKKIKKGD-----------------FSF---EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHTTTC-----------------CCC---CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHHHcCC-----------------CCC---CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1111100000 000 011123346778999999999999999999999865
No 149
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.8e-38 Score=365.67 Aligned_cols=344 Identities=25% Similarity=0.383 Sum_probs=159.0
Q ss_pred CCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEe
Q 043932 101 SFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAV 180 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 180 (1017)
++|+.|+++++.++ .+| .+..+++|++|+|++|.+++.. . +.++++|++|+|++|++++..| ++++++|++|++
T Consensus 46 ~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDIT-P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCch-h-hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 34444444444444 233 2444445555555555444322 2 4455555555555555543322 445555555555
Q ss_pred ccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccc
Q 043932 181 GKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGT 260 (1017)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (1017)
++|.+++..+ ++++++|++|++++|.+++. + .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~- 191 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD- 191 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC-
Confidence 5555543322 44555555555555554432 1 24455555555554 2333221 14555555555555555542
Q ss_pred cCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhh
Q 043932 261 LPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDF 340 (1017)
Q Consensus 261 l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 340 (1017)
++ .+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..
T Consensus 192 ~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~--------------------------- 238 (466)
T 1o6v_A 192 IS--VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GT--------------------------- 238 (466)
T ss_dssp CG--GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GG---------------------------
T ss_pred Ch--hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hh---------------------------
Confidence 21 13344444444444444443322 33344444444444444321 11
Q ss_pred HhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhccc
Q 043932 341 VTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGEL 420 (1017)
Q Consensus 341 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 420 (1017)
+..+++|+.|++++|++.+. .+ +..+++|+.|++++|++++..+ +..+
T Consensus 239 ---l~~l~~L~~L~l~~n~l~~~-------------------------~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 239 ---LASLTNLTDLDLANNQISNL-------------------------AP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp ---GGGCTTCSEEECCSSCCCCC-------------------------GG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred ---hhcCCCCCEEECCCCccccc-------------------------hh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 22333444444444433321 11 3344455555555555554333 4455
Q ss_pred ccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceec
Q 043932 421 KNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLD 500 (1017)
Q Consensus 421 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~ 500 (1017)
++|+.|++++|++++..| +..+++|++|++++|++++..| +..+++|+.|++++|++++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~----------------- 345 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD----------------- 345 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-----------------
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC-----------------
Confidence 555555555555553322 4455555555555555554433 4455555555555555441
Q ss_pred cCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCC
Q 043932 501 LSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHG 556 (1017)
Q Consensus 501 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 556 (1017)
. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 346 --------~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 346 --------V--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp --------C--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred --------c--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 1 123445555555555555555444 5555555555555555554
No 150
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4e-39 Score=359.06 Aligned_cols=256 Identities=24% Similarity=0.309 Sum_probs=201.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCce
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
..++|++.+.||+|+||+||+|++..+++.||+|++...... ..+|++++.++ +||||+++++++.+. +.
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDG-----KY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECS-----SE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcC-----CE
Confidence 457899999999999999999999999999999999754332 34688888888 799999999998654 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC----CCeEE
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD----MVSHV 857 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl 857 (1017)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||++..+ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 899999999999999997653 689999999999999999999999 99999999999998543 35999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.
T Consensus 162 ~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~ 231 (342)
T 2qr7_A 162 CDFGFAKQLRAEN--------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEI 231 (342)
T ss_dssp CCCTTCEECBCTT--------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHH
T ss_pred EECCCcccCcCCC--------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHH
Confidence 9999998654321 1122357899999999998888999999999999999999999999753221 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
......... ... ......+++++.+++.+||+.||++||++.|+++|-.
T Consensus 232 ~~~i~~~~~-~~~-------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 232 LARIGSGKF-SLS-------------------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp HHHHHHCCC-CCC-------------------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHccCCc-ccC-------------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 111000000 000 0001123567899999999999999999999988644
No 151
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.1e-38 Score=366.59 Aligned_cols=347 Identities=28% Similarity=0.372 Sum_probs=186.7
Q ss_pred ccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccE
Q 043932 122 GNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEV 201 (1017)
Q Consensus 122 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 201 (1017)
..+++|+.|++++|.++ .+|. +..+++|++|+|++|.+++..| +.++++|++|++++|++++..+ ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34667777777777776 4553 6677777777777777775433 6777777777777777765443 666777777
Q ss_pred EEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccc
Q 043932 202 FSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNN 281 (1017)
Q Consensus 202 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~ 281 (1017)
|++++|.+++..+ +..+++|++|++++|.+++ ++ .+..+++|++|+++ |.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~------------------------- 166 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQ------------------------- 166 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ES-------------------------
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Cc-------------------------
Confidence 7777776664432 6666666666666666653 22 25555555555553 22
Q ss_pred cCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccc
Q 043932 282 FFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFV 361 (1017)
Q Consensus 282 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (1017)
+.+.. .+..+++|+.|++++|++++.. .+..+++|++|++++|.+..... +..+++|+.|++++|+++
T Consensus 167 ~~~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--------~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 167 VTDLK--PLANLTTLERLDISSNKVSDIS--VLAKLTNLESLIATNNQISDITP--------LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp CCCCG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--------GGGCTTCCEEECCSSCCC
T ss_pred ccCch--hhccCCCCCEEECcCCcCCCCh--hhccCCCCCEEEecCCccccccc--------ccccCCCCEEECCCCCcc
Confidence 22221 2555556666666666655432 24444455555555444432110 222333334444333332
Q ss_pred cccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCccc
Q 043932 362 GELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGV 441 (1017)
Q Consensus 362 ~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 441 (1017)
++ ..+..+++|+.|++++|++++..+ +
T Consensus 235 -------------------------~~--~~l~~l~~L~~L~l~~n~l~~~~~--------------------------~ 261 (466)
T 1o6v_A 235 -------------------------DI--GTLASLTNLTDLDLANNQISNLAP--------------------------L 261 (466)
T ss_dssp -------------------------CC--GGGGGCTTCSEEECCSSCCCCCGG--------------------------G
T ss_pred -------------------------cc--hhhhcCCCCCEEECCCCccccchh--------------------------h
Confidence 11 123444555555555555544332 4
Q ss_pred ccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccce
Q 043932 442 GNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLV 521 (1017)
Q Consensus 442 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~ 521 (1017)
..+++|++|++++|++++..+ +..+++|+.|++++|++++ ..| +..+++|+
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~-------------------------~~~--~~~l~~L~ 312 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLED-------------------------ISP--ISNLKNLT 312 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSC-------------------------CGG--GGGCTTCS
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccC-------------------------chh--hcCCCCCC
Confidence 444555555555555553322 4455555555555555541 111 34445555
Q ss_pred EEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCC
Q 043932 522 KLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 522 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
.|+|++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| +..+++|+.|++++|+
T Consensus 313 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 386 (466)
T 1o6v_A 313 YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQA 386 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEE
T ss_pred EEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCc
Confidence 55555555554443 45555555555555555543 245555666666666666655544 5555666666666666
Q ss_pred CcC
Q 043932 602 LEG 604 (1017)
Q Consensus 602 l~~ 604 (1017)
+++
T Consensus 387 ~~~ 389 (466)
T 1o6v_A 387 WTN 389 (466)
T ss_dssp EEC
T ss_pred ccC
Confidence 655
No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=355.32 Aligned_cols=247 Identities=23% Similarity=0.257 Sum_probs=195.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.++||+|+||+||+|++..+++.||||++..... ....+...|+..+.++ +||||++++++|... +
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~-----~ 130 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG-----G 130 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----T
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-----C
Confidence 3689999999999999999999999999999999864332 2334455666666655 899999999999765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCC
T ss_pred EEEEEEecc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccc
Confidence 789999999 669999987654 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... .......
T Consensus 202 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~ 267 (311)
T 3p1a_A 202 GLLVELGTAG---------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQG 267 (311)
T ss_dssp TTCEECC---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTT
T ss_pred eeeeecccCC---------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhcc
Confidence 9987654322 1122468999999999887 789999999999999999999777644211 1111000
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..+ ......+++++.+++.+||+.||++|||+.|++++
T Consensus 268 ~~~--------------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 268 YLP--------------------------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp CCC--------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCC--------------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 000 01112346778999999999999999999999975
No 153
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.8e-39 Score=354.64 Aligned_cols=277 Identities=24% Similarity=0.364 Sum_probs=209.3
Q ss_pred hccccccCcccccCCceEEEEE----eCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
..+|++.+.||+|+||.||+|+ +..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--- 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---
Confidence 3568999999999999999999 56689999999997443 344578899999999999999999999986542
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
....++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~ 168 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIG 168 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred CceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEEC
Confidence 2567999999999999999965442 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||++.......... .......||..|+|||++.+..++.++||||+|+++|||++|..|+..... ...
T Consensus 169 Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~ 237 (302)
T 4e5w_A 169 DFGLTKAIETDKEYY-----TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA------LFL 237 (302)
T ss_dssp CCTTCEECCTTCCEE-----ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHH
T ss_pred cccccccccCCCcce-----eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh------HHh
Confidence 999998765432111 112234688899999999988999999999999999999999998654211 111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTR 1009 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 1009 (1017)
....+... ............... .......+++.+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 238 KMIGPTHG-QMTVTRLVNTLKEGK------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHCSCCG-GGHHHHHHHHHHTTC------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCccc-ccCHHHHHHHHhccC------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111000 000000000000000 00112234678999999999999999999999999999875
No 154
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=359.77 Aligned_cols=283 Identities=25% Similarity=0.397 Sum_probs=216.1
Q ss_pred hccccccCcccccCCceEEEEE----eCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGI----LGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.+.||+|+||.||+|+ ...+++.||+|++........+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---C
Confidence 4579999999999999999999 45689999999998766666788999999999999999999999886532 2
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 467999999999999999987642 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++........... ......++..|+|||++.+..++.++||||||+++|||++|..||...... +..
T Consensus 189 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~------~~~ 257 (326)
T 2w1i_A 189 FGLTKVLPQDKEYYK-----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMR 257 (326)
T ss_dssp CTTCEECCSSCSEEE-----CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH------HHH
T ss_pred Ccchhhccccccccc-----cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH------HHH
Confidence 999987653321111 111235788899999998888999999999999999999999997643111 111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1014 (1017)
..............+......... ......+++++.+++.+||+.||++|||+.|+++.|+.+++++.|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~g 326 (326)
T 2w1i_A 258 MIGNDKQGQMIVFHLIELLKNNGR------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326 (326)
T ss_dssp HHCTTCCTHHHHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hhccccchhhhHHHHHHHhhcCCC------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcC
Confidence 000000000000000000000000 011223567899999999999999999999999999999887643
No 155
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.7e-39 Score=352.54 Aligned_cols=267 Identities=21% Similarity=0.253 Sum_probs=202.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----- 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-----
Confidence 35789999999999999999999999999999999874422 2346788999999999999999999998764
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred CeEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 67899999999999999998653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......
T Consensus 178 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 248 (309)
T 2h34_A 178 FGIASATTDEKLT-------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN 248 (309)
T ss_dssp CCC-----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH
T ss_pred CccCccccccccc-------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc
Confidence 9999765432211 112346899999999999989999999999999999999999999764221 1111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHhhccccccccC
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-EMRDVVAKLCHTRETFFGRR 1016 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~~~ 1016 (1017)
...+. .......+++++.+++.+||+.||++|| +++++++.|+.+.+.....+
T Consensus 249 ~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~ 302 (309)
T 2h34_A 249 QAIPR------------------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR 302 (309)
T ss_dssp SCCCC------------------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred cCCCC------------------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence 00000 0011123356788999999999999999 99999999998877655433
No 156
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=366.84 Aligned_cols=267 Identities=25% Similarity=0.446 Sum_probs=201.2
Q ss_pred ccccccCcccccCCceEEEEEeCCC---cEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..|++.++||+|+||+||+|++..+ +..||+|.+.... ....+++.+|+.++++++||||+++++++... .+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~ 164 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EG 164 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC----SS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CC
Confidence 3577788999999999999997432 3568999986433 34567899999999999999999999987543 24
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.++++.... .+++.+++.++.||++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 165 ~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 165 SPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred CeEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 57899999999999999986542 678999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++......... ........+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+ ......
T Consensus 237 G~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~ 310 (373)
T 3c1x_A 237 GLARDMYDKEFDS----VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLL 310 (373)
T ss_dssp -------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHH
T ss_pred ccccccccccccc----ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHH
Confidence 9998664332111 111223457889999999998899999999999999999999 677776543221 111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFGR 1015 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1015 (1017)
..... . ....+++.+.+++.+||+.||++|||+.|++++|+.+...+.+.
T Consensus 311 ~~~~~-----~---------------------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 311 QGRRL-----L---------------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp TTCCC-----C---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred cCCCC-----C---------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 00000 0 01123567899999999999999999999999999998877654
No 157
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.8e-39 Score=347.23 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=208.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++... +.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NI 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-----CE
Confidence 4578999999999999999999999899999999997543 33457789999999999999999999998764 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 899999999999999987543 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
.+......... .......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||............+...
T Consensus 151 ~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (276)
T 2yex_A 151 LATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224 (276)
T ss_dssp TCEECEETTEE------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT
T ss_pred CccccCCCcch------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc
Confidence 99865432211 11223568999999999987665 789999999999999999999997654332222222111
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.... ......++.+.+++.+||+.||++|||+.|++++-
T Consensus 225 ~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 225 KTYL--------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp CTTS--------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred cccc--------------------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 0000 00112356688999999999999999999998753
No 158
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.4e-39 Score=350.76 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=206.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 78 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----S 78 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC-----C
Confidence 3578999999999999999999999999999999997543 23456788999999999999999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC---eEE
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---SHV 857 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl 857 (1017)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 79 ~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl 149 (284)
T 3kk8_A 79 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 149 (284)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEE
Confidence 7899999999999999887653 689999999999999999999999 9999999999999986655 999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .....
T Consensus 150 ~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~ 219 (284)
T 3kk8_A 150 ADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQI 219 (284)
T ss_dssp CCCTTCEECCSSC---------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred eeceeeEEcccCc---------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHH
Confidence 9999997654322 1123568999999999999899999999999999999999999997542211 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
....... .. .....+++++.+++.+||+.||++|||+.|++++-
T Consensus 220 ~~~~~~~-----~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 220 KAGAYDY-----PS-------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp HHTCCCC-----CT-------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred HhccccC-----Cc-------------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 1110000 00 00112356788999999999999999999998863
No 159
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3e-39 Score=349.44 Aligned_cols=251 Identities=27% Similarity=0.413 Sum_probs=193.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc----chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK----GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.++||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE----- 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-----
Confidence 468999999999999999999985 78899999874432 2346788999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC---ceeecCCCCceEeCC-----
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP---MVHGDLKPSNVLLDH----- 851 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~---ivH~Dlkp~NIll~~----- 851 (1017)
+..++||||+++++|.+++... .+++..++.++.|++.||+|||++ + |+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~ 148 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENG 148 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSS
T ss_pred CceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccc
Confidence 5689999999999999998643 689999999999999999999999 7 999999999999986
Q ss_pred ---CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 852 ---DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 852 ---~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
++.+||+|||.+....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 149 ~~~~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 218 (271)
T 3dtc_A 149 DLSNKILKITDFGLAREWHRTT----------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218 (271)
T ss_dssp CCSSCCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccCcceEEccCCccccccccc----------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 7789999999997654321 112468999999999998889999999999999999999999997642
Q ss_pred ccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhc
Q 043932 929 TEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHT 1008 (1017)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 1008 (1017)
..... .......... .....+++.+.+++.+||+.||++|||+.|++++|+.+
T Consensus 219 ~~~~~-~~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 219 GLAVA-YGVAMNKLAL--------------------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHH-HHHHTSCCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHH-HhhhcCCCCC--------------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 21100 0000000000 00112356789999999999999999999999999864
No 160
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.9e-39 Score=349.02 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=203.4
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
...|++.+.||+|+||+||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++.... .+...
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 103 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKC 103 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCce
Confidence 346888899999999999999999999999999997543 334577899999999999999999999886542 23467
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeC-CCCCeEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLD-HDMVSHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~ 858 (1017)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~ 174 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred EEEEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEe
Confidence 899999999999999998643 689999999999999999999999 7 99999999999997 78999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||++...... ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||..............
T Consensus 175 Dfg~~~~~~~~----------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 243 (290)
T 1t4h_A 175 DLGLATLKRAS----------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT 243 (290)
T ss_dssp CTTGGGGCCTT----------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred eCCCccccccc----------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh
Confidence 99999754321 1123568999999998875 589999999999999999999999975322211111110
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
....+.. .....++++.+++.+||+.||.+|||+.|+++|
T Consensus 244 ~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 244 SGVKPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TTCCCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCccc--------------------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0000000 011124568999999999999999999999976
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.2e-39 Score=369.84 Aligned_cols=256 Identities=22% Similarity=0.299 Sum_probs=197.6
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--------cchHHHHHHHHHHHHhcCCCCceeeeeeeec
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--------KGAFKSFMAECKALRNIRHRNLIKIITICSS 773 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1017)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999999999999999997432 1122357899999999999999999999743
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
+..++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 212 ------~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 212 ------EDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp ------SEEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred ------CceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 34689999999999999887553 689999999999999999999999 999999999999997544
Q ss_pred ---CeEEeecccccccccccccccccCCCcccccccCccccCcccccC---CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 854 ---VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG---SEASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 854 ---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
.+||+|||+|+...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 277 ~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CcceEEEeecccceecCCCc---------cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 59999999998664321 1123579999999999853 56788999999999999999999999764
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
................. .......+++.+.+++.+||+.||++|||+.|+++|-
T Consensus 348 ~~~~~~~~~i~~~~~~~------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 348 RTQVSLKDQITSGKYNF------------------------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp SSSCCHHHHHHTTCCCC------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cchHHHHHHHhcCCCCC------------------------CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 33222111111111000 0111223466789999999999999999999999864
No 162
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.9e-39 Score=376.33 Aligned_cols=261 Identities=23% Similarity=0.443 Sum_probs=213.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
...+|++.++||+|+||.||+|++..++..||||+++... ...+.+.+|++++++++||||++++++|... +..
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 291 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPF 291 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSC
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecC-----CcE
Confidence 3567999999999999999999999889999999997543 3457899999999999999999999998654 567
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred EEEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccc
Confidence 999999999999999986532 3689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++........ ......+|..|+|||++.+..++.++|||||||++|||++ |..||...... .........
T Consensus 365 a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~ 435 (495)
T 1opk_A 365 SRLMTGDTYT-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKD 435 (495)
T ss_dssp EECCTTCCEE-------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT
T ss_pred ceeccCCcee-------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 9876432211 1112356789999999998899999999999999999999 99999764322 111111100
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
.. ......+++.+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 436 ~~--------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 436 YR--------------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CC--------------------------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 00 001123467789999999999999999999999999987643
No 163
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.7e-39 Score=348.64 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=182.6
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-----D 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----C
Confidence 468999999999999999999999999999999987432 23356788999999999999999999998754 5
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+ ++++.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 156 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCS
T ss_pred eEEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeec
Confidence 689999999 668888887653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|++....... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... .......
T Consensus 157 g~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 226 (275)
T 2eue_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISN 226 (275)
T ss_dssp SCC------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred ccceeccCcc---------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Confidence 9997654322 1122468999999999988765 789999999999999999999997532110 0000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... .....+++.+.+++.+||+.||.+|||+.|++++
T Consensus 227 ~~~----------------------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 227 GVY----------------------------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TCC----------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCC----------------------------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 000 0011235568899999999999999999999875
No 164
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-39 Score=361.38 Aligned_cols=280 Identities=20% Similarity=0.321 Sum_probs=199.0
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.....++|++.++||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN--- 105 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET---
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC---
Confidence 34456799999999999999999999999999999999974432 2345678999999999999999999998765
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe-----CCC
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL-----DHD 852 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~ 852 (1017)
+..++||||+++ +|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||++ +.+
T Consensus 106 --~~~~lv~e~~~~-~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 173 (329)
T 3gbz_A 106 --HRLHLIFEYAEN-DLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASET 173 (329)
T ss_dssp --TEEEEEEECCSE-EHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----C
T ss_pred --CEEEEEEecCCC-CHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCcc
Confidence 678999999975 9999998764 689999999999999999999999 99999999999999 455
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccC
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEG 931 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~ 931 (1017)
+.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.......
T Consensus 174 ~~~kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 245 (329)
T 3gbz_A 174 PVLKIGDFGLARAFGIPI--------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245 (329)
T ss_dssp CEEEECCTTHHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ceEEECcCCCccccCCcc--------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH
Confidence 569999999998664221 111224689999999999874 48999999999999999999999997643322
Q ss_pred ccHHHHHHhhcCch--hhhhcc-chhhHHHHh-hcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 932 LTLHEFAKIALPEK--VIEIVD-PLLLIEVMA-NNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~--~~~~~d-~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
...........+.. ...... +.....+.. ...... ......+++++.+++.+||+.||++|||+.|+++|-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 320 (329)
T 3gbz_A 246 QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLK---RVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320 (329)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHH---HHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHh---hhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence 11111111111111 000000 000000000 000000 011112456789999999999999999999999763
No 165
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=362.28 Aligned_cols=276 Identities=21% Similarity=0.295 Sum_probs=200.5
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc-hHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-AFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
++|++.+.||+|+||+||+|++..+++.||+|++...... ....+.+|++++++++||||+++++++... +..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-----SCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC-----CEEE
Confidence 5799999999999999999999999999999998644322 122455799999999999999999998654 6689
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLA 863 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 863 (1017)
+||||+++ +|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLDK-DLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEeccccc-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 99999975 99999887643 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhc
Q 043932 864 KFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ..........
T Consensus 148 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 218 (324)
T 3mtl_A 148 RAKSIPT--------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILG 218 (324)
T ss_dssp ECC--------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred ccccCCc--------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 7543221 11122468999999999876 568999999999999999999999997643321 1222222111
Q ss_pred ---CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 943 ---PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 943 ---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+..+...........+. ...............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTYN-YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHTC-CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCChHhchhhhcchhhcccc-cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 11111111111000000 00000001111222346678999999999999999999999885
No 166
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=9.9e-39 Score=350.57 Aligned_cols=268 Identities=25% Similarity=0.421 Sum_probs=209.0
Q ss_pred hccccccCcccccCCceEEEEEeCCC---cEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..+|++.++||+|+||+||+|++..+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----E 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----S
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC----C
Confidence 45789999999999999999997543 3468999887433 34457789999999999999999999987543 2
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 171 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVAD 171 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECS
T ss_pred CceEEEEeCCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECc
Confidence 46789999999999999997644 2678999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++......... ........||+.|+|||.+.+..++.++||||+|+++|||++ |.+||....... ......
T Consensus 172 fg~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~ 246 (298)
T 3f66_A 172 FGLARDMYDKEYYS----VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLL 246 (298)
T ss_dssp CGGGCCCSCGGGCB----C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHH
T ss_pred ccccccccccchhc----cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHh
Confidence 99998765433211 112233568899999999998899999999999999999999 555665432221 111111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFGR 1015 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1015 (1017)
..... .....+++.+.+++.+||+.||++|||+.|+++.|+.+.+.+.+.
T Consensus 247 ~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 247 QGRRL---------------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred cCCCC---------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 10000 001112456899999999999999999999999999999887764
No 167
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.7e-39 Score=375.81 Aligned_cols=264 Identities=23% Similarity=0.415 Sum_probs=212.6
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++....++|++.+.||+|+||+||+|++. ++..||||+++... ...+.+.+|+.++++++||||+++++++..
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---- 254 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---- 254 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC----
Confidence 344556678999999999999999999996 57789999997543 346789999999999999999999999752
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
+..++||||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 255 --~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl 325 (454)
T 1qcf_A 255 --EPIYIITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKI 325 (454)
T ss_dssp --SSCEEEECCCTTCBHHHHHHSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEE
T ss_pred --CccEEEEeecCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEE
Confidence 45799999999999999997542 13678899999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~ 936 (1017)
+|||+++......... .....+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 326 ~DFG~a~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~ 396 (454)
T 1qcf_A 326 ADFGLARVIEDNEYTA-------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIR 396 (454)
T ss_dssp CSTTGGGGBCCHHHHT-------TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHH
T ss_pred eeCCCceEcCCCceec-------cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHH
Confidence 9999998764322111 112346889999999988889999999999999999999 999997532211 000
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
....... ......+++++.+++.+||+.||++|||+.+|++.|+++...
T Consensus 397 ~i~~~~~--------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 397 ALERGYR--------------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHTCC--------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHcCCC--------------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 0000000 001123467789999999999999999999999999998754
No 168
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.9e-39 Score=346.95 Aligned_cols=258 Identities=27% Similarity=0.430 Sum_probs=209.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.+.||+|+||.||+|++. ++..||+|++..... ..+.+.+|++++++++||||+++++++... +..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CCeE
Confidence 468999999999999999999997 677899999975443 347789999999999999999999998654 5689
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccc
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLA 863 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 863 (1017)
+||||+++++|.+++..... .+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 99999999999999987542 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhhc
Q 043932 864 KFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
......... ......||+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ..... ....
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~i-~~~~ 222 (267)
T 3t9t_A 152 RFVLDDQYT-------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDI-STGF 222 (267)
T ss_dssp GGBCCHHHH-------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHH-HTTC
T ss_pred ccccccccc-------ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-HHHHH-hcCC
Confidence 866432211 1112457889999999988889999999999999999999 899987532210 00000 0000
Q ss_pred CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 943 PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 943 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
.. . ....+++.+.+++.+||+.||++||++.|++++|+++.++
T Consensus 223 ~~-----~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 RL-----Y---------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CC-----C---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cC-----C---------------------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00 0 0011255688999999999999999999999999998764
No 169
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.7e-39 Score=353.55 Aligned_cols=268 Identities=21% Similarity=0.298 Sum_probs=202.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 104 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----- 104 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----
Confidence 3468999999999999999999999899999999997432 33456788999999999999999999998765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHFKK--QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CcEEEEEecCCCCCHHHHHHHhcc--cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEe
Confidence 678999999999999999875321 123689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++........ ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...............
T Consensus 180 fg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 251 (310)
T 2wqm_A 180 LGLGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE 251 (310)
T ss_dssp C--------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH
T ss_pred ccceeeecCCCc--------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh
Confidence 999876543211 112346899999999999989999999999999999999999999754222111111100
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFF 1013 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1013 (1017)
. ...... ....+++++.+++.+||+.||++|||+.||++.|+++++...
T Consensus 252 ~---~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 252 Q---CDYPPL----------------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp T---TCSCCC----------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred c---ccCCCC----------------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 0 000000 001235678999999999999999999999999999887543
No 170
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=361.02 Aligned_cols=245 Identities=23% Similarity=0.339 Sum_probs=203.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--------chHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
..++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999999999999999999975431 1234577899999999999999999998654
Q ss_pred CCCCCceeEEEEEeccCC-CHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 775 DSKGADFKALVFECMKNG-SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
+..++||||+.+| +|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 102 -----~~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 102 -----GFFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp -----SEEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred -----CEEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 6789999999777 9999998654 689999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGL 932 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~ 932 (1017)
.+||+|||+++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.......
T Consensus 168 ~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~- 237 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV- 237 (335)
T ss_dssp CEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-
T ss_pred cEEEeecccceECCCCC---------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-
Confidence 99999999998664322 1123568999999999988776 889999999999999999999996532110
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.....+ ...+++++.+++.+||+.||++|||+.|++++-
T Consensus 238 --------------~~~~~~--------------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 238 --------------EAAIHP--------------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp --------------TTCCCC--------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred --------------hhccCC--------------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 000000 001245688999999999999999999999874
No 171
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6e-39 Score=348.62 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=203.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-----
Confidence 3568999999999999999999999999999999986432 22346788999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred CEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 67899999999999999997653 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .......
T Consensus 153 fg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 221 (279)
T 3fdn_A 153 FGWSVHAPSSR----------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISR 221 (279)
T ss_dssp CCEESCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHH
T ss_pred ccccccCCccc----------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHHHh
Confidence 99986543211 123468999999999999899999999999999999999999997532110 0000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
... .....+++.+.+++.+||+.||++|||+.|+++|-.
T Consensus 222 ~~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 222 VEF----------------------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp TCC----------------------------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred CCC----------------------------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 000 000113456889999999999999999999998743
No 172
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.7e-39 Score=376.35 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=207.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.++||+|+||.||+|++..+|+.||+|++.... ......+.+|++++++++||||+++++++.+. +
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-----~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-----D 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC-----C
Confidence 467999999999999999999999999999999997432 23446788999999999999999999998664 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 78999999999999999976532 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+|+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......
T Consensus 331 Gla~~~~~~~---------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~ 400 (576)
T 2acx_A 331 GLAVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERL 400 (576)
T ss_dssp TTCEECCTTC---------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHH
T ss_pred ccceecccCc---------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHH
Confidence 9998664322 11235799999999999998999999999999999999999999976432211 1111110
Q ss_pred h--cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 043932 941 A--LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAK 1004 (1017)
Q Consensus 941 ~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1004 (1017)
. .+.. ....+++++.+++.+||+.||.+|| ++.||++|
T Consensus 401 i~~~~~~--------------------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 401 VKEVPEE--------------------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHCCCC--------------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred hhccccc--------------------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 0000 0112356789999999999999999 78999876
No 173
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.9e-39 Score=355.90 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=195.2
Q ss_pred hccccccCcccccCCceEEEEEeC---CCcEEEEEEEeeecC----cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ----KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
.++|++.++||+|+||.||+|++. .+++.||+|++.... ......+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 468999999999999999999985 578999999997442 23345678899999999999999999998664
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeE
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSH 856 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 856 (1017)
+..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 94 ---~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 94 ---GKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ---SCEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 67899999999999999997653 688999999999999999999999 999999999999999999999
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....
T Consensus 162 l~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~ 232 (327)
T 3a62_A 162 LTDFGLCKESIHDG--------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDK 232 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred EEeCCcccccccCC--------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence 99999987543211 11223579999999999999899999999999999999999999997642211 1111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAKL 1005 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 1005 (1017)
...... . .....++.+.+++.+||+.||++|| ++.|+++|-
T Consensus 233 i~~~~~---------------------~-------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 233 ILKCKL---------------------N-------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHTCC---------------------C-------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHhCCC---------------------C-------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 111000 0 0012256688999999999999999 788888764
No 174
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.9e-39 Score=360.62 Aligned_cols=277 Identities=22% Similarity=0.378 Sum_probs=216.9
Q ss_pred cCHHHHHHhhccccccCcccccCCceEEEEEeC-----CCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeee
Q 043932 695 VSYAELSKATSEFASSNMIGQGSFGSVYKGILG-----EDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKII 768 (1017)
Q Consensus 695 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 768 (1017)
+..+++....++|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344556667789999999999999999999876 3578899999974432 3345788999999999999999999
Q ss_pred eeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCC----ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCC
Q 043932 769 TICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDH----LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKP 844 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 844 (1017)
+++... +..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 95 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp 166 (322)
T 1p4o_A 95 GVVSQG-----QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 166 (322)
T ss_dssp EEECSS-----SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSG
T ss_pred EEEccC-----CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCcc
Confidence 998654 5679999999999999999764210 0113568999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCC
Q 043932 845 SNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRP 923 (1017)
Q Consensus 845 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p 923 (1017)
+||+++.++.+||+|||+++......... ......||+.|+|||++.+..++.++||||+|+++|||++ |+.|
T Consensus 167 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 240 (322)
T 1p4o_A 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240 (322)
T ss_dssp GGEEECTTCCEEECCTTCCCGGGGGGCEE------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred ceEEEcCCCeEEECcCccccccccccccc------cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999998654332111 1122457889999999988889999999999999999999 8999
Q ss_pred CCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 043932 924 TDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVA 1003 (1017)
Q Consensus 924 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1003 (1017)
|...... ........... ......+++.+.+++.+||+.||.+|||+.|+++
T Consensus 241 ~~~~~~~-----~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~ 292 (322)
T 1p4o_A 241 YQGLSNE-----QVLRFVMEGGL-----------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292 (322)
T ss_dssp TTTSCHH-----HHHHHHHTTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccCCHH-----HHHHHHHcCCc-----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 8653221 11110000000 0011123567899999999999999999999999
Q ss_pred HHhhcccccc
Q 043932 1004 KLCHTRETFF 1013 (1017)
Q Consensus 1004 ~L~~~~~~~~ 1013 (1017)
+|+++.+..+
T Consensus 293 ~L~~~~~~~~ 302 (322)
T 1p4o_A 293 SIKEEMEPGF 302 (322)
T ss_dssp HHGGGSCTTH
T ss_pred HHHHhhccCC
Confidence 9999876544
No 175
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3e-38 Score=354.13 Aligned_cols=280 Identities=23% Similarity=0.320 Sum_probs=215.2
Q ss_pred CHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHh--cCCCCceeeeeeeec
Q 043932 696 SYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRN--IRHRNLIKIITICSS 773 (1017)
Q Consensus 696 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 773 (1017)
...--....++|++.+.||+|+||+||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3333445667999999999999999999998 4889999998633 33567788888887 689999999999866
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeecCCCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPMVHGDLKPS 845 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~ 845 (1017)
... .....++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+
T Consensus 108 ~~~-~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~ 176 (342)
T 1b6c_B 108 DNG-TWTQLWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSK 176 (342)
T ss_dssp CCS-SCCCEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGG
T ss_pred cCC-ccceeEEEEeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHH
Confidence 522 123689999999999999999754 5899999999999999999999 77 9999999999
Q ss_pred ceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC------CcCccccchhHHHHHHHHHh
Q 043932 846 NVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS------EASMTGDVYSFGILLLELFT 919 (1017)
Q Consensus 846 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~ellt 919 (1017)
||+++.++.+||+|||++........... .......||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEE----ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HEEECCCCCEEEEECCCceeccccccccc----cccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 99999999999999999986643321110 011235699999999998775 34478999999999999999
Q ss_pred C----------CCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccC
Q 043932 920 G----------RRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSM 989 (1017)
Q Consensus 920 g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 989 (1017)
| ..||............+............+.. .....++++.+.+++.+||+
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~ 315 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN-----------------RWQSCEALRVMAKIMRECWY 315 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-----------------GGGTSHHHHHHHHHHHHHCC
T ss_pred ccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcc-----------------cccchhHHHHHHHHHHHHhc
Confidence 9 67876654433333333332211111000000 01123567789999999999
Q ss_pred CCCCCCCCHHHHHHHHhhccccc
Q 043932 990 ESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 990 ~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.||++|||+.||+++|+.+.++.
T Consensus 316 ~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 316 ANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cChhhCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999988754
No 176
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-38 Score=363.74 Aligned_cols=257 Identities=20% Similarity=0.289 Sum_probs=196.9
Q ss_pred hcccccc-CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHh-cCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRN-IRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|.+. ++||+|+||+||+|++..+++.||||++... ..+.+|++++.+ .+||||+++++++... ..+..+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 4567766 6899999999999999999999999998632 456788888754 4899999999988642 122367
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC---CCCeEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVSHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 858 (1017)
.|+||||+++|+|.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 8999999999999999986532 3689999999999999999999999 9999999999999987 7899999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc--H-H
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT--L-H 935 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~--~-~ 935 (1017)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... . .
T Consensus 207 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~ 277 (400)
T 1nxk_A 207 DFGFAKETTSHN---------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277 (400)
T ss_dssp CCTTCEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH
T ss_pred ecccccccCCCC---------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH
Confidence 999998654221 112357899999999999989999999999999999999999999765332211 1 1
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
......... . ......+++++.+++.+||+.||++|||+.|+++|-.
T Consensus 278 ~i~~~~~~~-----~-------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 278 RIRMGQYEF-----P-------------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp HHHHTCCCC-----C-------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHcCcccC-----C-------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 111100000 0 0011223567899999999999999999999998743
No 177
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5e-39 Score=356.24 Aligned_cols=277 Identities=22% Similarity=0.321 Sum_probs=217.1
Q ss_pred CHHHHHHhhccccccCcccccCCceEEEEEe-----CCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeee
Q 043932 696 SYAELSKATSEFASSNMIGQGSFGSVYKGIL-----GEDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKII 768 (1017)
Q Consensus 696 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~ 768 (1017)
...++....++|++.+.||+|+||+||+|++ ..+++.||||++..... ...+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 4455666678999999999999999999985 45778999999975433 3446788999999999 799999999
Q ss_pred eeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCcc----------ccccCHHHHHHHHHHHHHHHHHHhhCCCCCce
Q 043932 769 TICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLE----------VCKLTLIQRVNIAIDVASAIEYLHHHCQPPMV 838 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 838 (1017)
+++... ....++||||+++|+|.+++........ ...+++.+++.++.|++.||+|||++ +|+
T Consensus 98 ~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 998643 2457999999999999999987643110 12388999999999999999999999 999
Q ss_pred eecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHH
Q 043932 839 HGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELF 918 (1017)
Q Consensus 839 H~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 918 (1017)
||||||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.++||||+||++|||+
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 244 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccc------eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999865432211 1112346789999999998889999999999999999999
Q ss_pred h-CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC
Q 043932 919 T-GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME 997 (1017)
Q Consensus 919 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 997 (1017)
+ |..||................ .... ....+++.+.+++.+||+.||.+|||
T Consensus 245 t~g~~p~~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps 297 (316)
T 2xir_A 245 SLGASPYPGVKIDEEFCRRLKEG-TRMR--------------------------APDYTTPEMYQTMLDCWHGEPSQRPT 297 (316)
T ss_dssp TTSCCSSTTCCCSHHHHHHHHHT-CCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hCCCCCCcccchhHHHHHHhccC-ccCC--------------------------CCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 8 999997643221111111110 0000 00112556889999999999999999
Q ss_pred HHHHHHHHhhccccc
Q 043932 998 MRDVVAKLCHTRETF 1012 (1017)
Q Consensus 998 ~~evl~~L~~~~~~~ 1012 (1017)
+.|++++|+.+.+..
T Consensus 298 ~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 298 FSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999987654
No 178
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=349.71 Aligned_cols=268 Identities=24% Similarity=0.373 Sum_probs=209.8
Q ss_pred ccccccCcccccCCceEEEEEeCCC---cEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGED---EMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
-.|...++||+|+||+||+|++..+ +..||+|++..... ...+.+.+|+.++++++||||+++++++...+ .
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 96 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----G 96 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----S
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----C
Confidence 3566779999999999999996443 44799999874333 34577899999999999999999999986541 3
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+.+|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Df 168 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADF 168 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCT
T ss_pred CcEEEEecccCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcC
Confidence 4589999999999999998644 2688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++......... ........+|+.|+|||.+.+..++.++||||+|+++|+|++|..|+........ .......
T Consensus 169 g~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~ 243 (298)
T 3pls_A 169 GLARDILDREYYS----VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLAQ 243 (298)
T ss_dssp TSSCTTTTGGGGC----SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHHT
T ss_pred CCcccccCCcccc----cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhhc
Confidence 9998664332111 1122235688999999999999999999999999999999996666543222211 1111111
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccccc
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFGR 1015 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 1015 (1017)
..... ....+++.+.+++.+||+.||.+|||+.|+++.|+++.+.+.+.
T Consensus 244 ~~~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 244 GRRLP--------------------------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp TCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CCCCC--------------------------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 11000 01123557899999999999999999999999999998877654
No 179
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.8e-39 Score=348.57 Aligned_cols=260 Identities=21% Similarity=0.380 Sum_probs=206.1
Q ss_pred hhccccccCcccccCCceEEEEEeCC---CcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.+.||+|+||+||+|++.. ++..||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 35689999999999999999998643 45679999987543 2345778999999999999999999998753
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 85 -~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (281)
T 3cc6_A 85 -EPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLG 155 (281)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEEC
T ss_pred -CCCEEEEecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeC
Confidence 23589999999999999997654 2689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||.+......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 156 Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~ 226 (281)
T 3cc6_A 156 DFGLSRYIEDEDYY-------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGV 226 (281)
T ss_dssp CCCGGGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHH
T ss_pred ccCCCccccccccc-------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHH
Confidence 99999866432211 1122457889999999988889999999999999999998 999997532221 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
....... .....+++.+.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 227 ~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 227 LEKGDRL--------------------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCCCC--------------------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1100000 00112356789999999999999999999999999988653
No 180
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=357.34 Aligned_cols=260 Identities=24% Similarity=0.401 Sum_probs=202.6
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEE----EEEEeeec-CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIV----AVKVINLK-QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
.++|++.++||+|+||+||+|++..+++.| |+|.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 468999999999999999999998777654 66666433 334567899999999999999999999998653
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
..++|+||+++|+|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred --CceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEc
Confidence 36899999999999999987643 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||+++........ .......||+.|+|||++.+..++.++||||+||++|||++ |+.||....... ....
T Consensus 160 DfG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~ 231 (327)
T 3lzb_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 231 (327)
T ss_dssp CTTC----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred cCcceeEccCcccc------ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH
Confidence 99999876433211 11122457889999999999899999999999999999999 999997643221 1111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
....... .....++..+.+++.+||+.||.+||++.|+++.|+.+.+.
T Consensus 232 ~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 232 LEKGERL--------------------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHTTCCC--------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHcCCCC--------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111000 00112355688999999999999999999999999988743
No 181
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.5e-39 Score=348.75 Aligned_cols=255 Identities=23% Similarity=0.335 Sum_probs=199.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|.+.++||+|+||+||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY-----HNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC-----CeE
Confidence 468999999999999999999999999999999997554 33457889999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 859 (1017)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQA--RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHhhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 999999999999999865321 123689999999999999999999999 99999999999999 4568899999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++....... ......||+.|+|||++.+ .++.++||||+|+++|||++|+.||........ .....
T Consensus 171 fg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~ 238 (285)
T 3is5_A 171 FGLAELFKSDE---------HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKAT 238 (285)
T ss_dssp CCCCCC-------------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred eecceecCCcc---------cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--Hhhhc
Confidence 99997654322 1123468999999998864 689999999999999999999999976422110 00000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...+. . .......++.+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~---------~---------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 239 YKEPN---------Y---------------AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HCCCC---------C---------------CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cCCcc---------c---------------ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0 00001124568899999999999999999999875
No 182
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-39 Score=374.56 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=196.6
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.++||+|+||.||+|++..+++.||||++... .......+.+|+.+++.++||||+++++++... +
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----D 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----T
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----C
Confidence 46899999999999999999999999999999999743 233446778899999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhh-CCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999997653 68999999999999999999998 8 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 293 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~ 363 (446)
T 4ejn_A 293 FGLCKEGIKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELILM 363 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred CCCceeccCCC--------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-HHHHHHh
Confidence 99997543211 11223679999999999999999999999999999999999999997542210 0000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 1005 (1017)
... . .....++++.+++.+||+.||.+|| ++.|+++|-
T Consensus 364 ~~~---------------------~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 364 EEI---------------------R-------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp CCC---------------------C-------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred CCC---------------------C-------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 000 0 0112356788999999999999999 999998763
No 183
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.1e-39 Score=370.60 Aligned_cols=256 Identities=30% Similarity=0.388 Sum_probs=208.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++... ....
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCce
Confidence 3568999999999999999999985 7799999997543 457899999999999999999999998653 1358
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 335 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 335 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCC
Confidence 999999999999999986532 2478999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
++...... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ........
T Consensus 336 a~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~ 402 (450)
T 1k9a_A 336 TKEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG 402 (450)
T ss_dssp CEECC-----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTT
T ss_pred cccccccc-----------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC
Confidence 97543211 11246889999999999999999999999999999998 999997643221 11111100
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.. ......+++++.+++.+||+.||++|||+.|+++.|+.+...-
T Consensus 403 ~~--------------------------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 403 YK--------------------------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CC--------------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 00 0011234678899999999999999999999999999987653
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=362.68 Aligned_cols=283 Identities=23% Similarity=0.291 Sum_probs=201.5
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-----chHHHHHHHHHHHHhcCCCCceeeeeeeecCC
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-----GAFKSFMAECKALRNIRHRNLIKIITICSSID 775 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1017)
....++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 84 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK- 84 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC-
Confidence 3446789999999999999999999998999999999874322 1235678999999999999999999998654
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCe
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
+..++||||+++ +|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 85 ----~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 85 ----SNISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp ----TCCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ----CceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 568999999986 89999876542 678889999999999999999999 99999999999999999999
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccH
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTL 934 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~ 934 (1017)
||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|.+||....... ..
T Consensus 152 kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~ 222 (346)
T 1ua2_A 152 KLADFGLAKSFGSPN--------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QL 222 (346)
T ss_dssp EECCCGGGSTTTSCC--------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred EEEecccceeccCCc--------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HH
Confidence 999999998654321 111235689999999998764 58999999999999999999999987643221 11
Q ss_pred HHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 935 HEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 935 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
..............+.+.....++.................+++++.+++.+||+.||++|||+.|++++-.
T Consensus 223 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp HHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred HHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 111111111000000000000000000000000001112334577999999999999999999999998743
No 185
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.4e-39 Score=361.35 Aligned_cols=246 Identities=28% Similarity=0.329 Sum_probs=192.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHH-HHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKA-LRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|..+ ++.++||||+++++++...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~----- 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----- 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC-----
Confidence 4689999999999999999999999999999999975432 233456667776 5678999999999998765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 67899999999999999998653 688999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 183 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~ 253 (373)
T 2r5t_A 183 FGLCKENIEHN--------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILN 253 (373)
T ss_dssp CCBCGGGBCCC--------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHH
T ss_pred CccccccccCC--------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHh
Confidence 99997533211 12234679999999999999999999999999999999999999997642211 0111110
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRD 1000 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1000 (1017)
... . ....++..+.+++.+||+.||.+||++.+
T Consensus 254 ~~~---------------------~-------~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 254 KPL---------------------Q-------LKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp SCC---------------------C-------CCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ccc---------------------C-------CCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 000 0 00122456889999999999999999853
No 186
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-40 Score=364.20 Aligned_cols=272 Identities=24% Similarity=0.345 Sum_probs=190.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHh--cCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRN--IRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++..... ....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS-SSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC-ccce
Confidence 468999999999999999999874 778999998643 23567778888887 689999999999876522 1236
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeecCCCCceEeCCCC
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
.++||||+++|+|.++++.. .+++.+++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTC
T ss_pred eEEEEeccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCC
Confidence 89999999999999999754 5778889999999999999999 77 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCC------CcCccccchhHHHHHHHHHhC-------
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS------EASMTGDVYSFGILLLELFTG------- 920 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg------- 920 (1017)
.+||+|||+++......... ........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 146 ~~kl~DFg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CC-BCCCCC-CCEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CEEEeecCcceeccCCCccc----ccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 99999999997654332111 1111234699999999999776 455789999999999999999
Q ss_pred ---CCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC
Q 043932 921 ---RRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME 997 (1017)
Q Consensus 921 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 997 (1017)
+.||...................... .+.. .......++++.+.+++.+||+.||++|||
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKL----RPNI-------------PNRWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHHTTSCC----CCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred ceeeccccccCCCCccHHHHHHHHHHhhc----CCCc-------------cccccchhhHHHHHHHHHHHhccCcccCCC
Confidence 55554432221111111111100000 0000 001112356778999999999999999999
Q ss_pred HHHHHHHHhhccccc
Q 043932 998 MRDVVAKLCHTRETF 1012 (1017)
Q Consensus 998 ~~evl~~L~~~~~~~ 1012 (1017)
+.|+++.|+.+.+..
T Consensus 285 ~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHHC-CCC-
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999998754
No 187
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7e-39 Score=358.28 Aligned_cols=251 Identities=25% Similarity=0.341 Sum_probs=202.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.+.|+..+.||+|+||+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++... +
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 127 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----H 127 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----T
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----C
Confidence 3568999999999999999999999999999999975432 2346788999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||++ |++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 198 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 198 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred eEEEEEecCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeec
Confidence 7899999997 58888886543 2789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCccccc---CCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM---GSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|++...... ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .....
T Consensus 199 G~a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~ 265 (348)
T 1u5q_A 199 GSASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHI 265 (348)
T ss_dssp TTCBSSSSB------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred cCceecCCC------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 999765321 1246899999999984 4578999999999999999999999996532211 01111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhh
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCH 1007 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1007 (1017)
.....+. . ....+++.+.+++.+||+.||++|||+.|++++..-
T Consensus 266 ~~~~~~~---------~-----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 266 AQNESPA---------L-----------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp HHSCCCC---------C-----------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred HhcCCCC---------C-----------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 1100000 0 001224568899999999999999999999876543
No 188
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.3e-38 Score=346.83 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=203.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc------chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 80 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK--- 80 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC---
Confidence 4579999999999999999999999999999999975432 1357889999999999999999999998654
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC----
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM---- 853 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 853 (1017)
+..++||||+++++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 81 --~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~ 149 (283)
T 3bhy_A 81 --TDVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNP 149 (283)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSC
T ss_pred --CeEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCC
Confidence 67899999999999999997643 689999999999999999999999 999999999999998877
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT 933 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~ 933 (1017)
.+||+|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .
T Consensus 150 ~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~ 219 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-T 219 (283)
T ss_dssp CEEECCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-H
T ss_pred ceEEEecccceeccCCC---------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-H
Confidence 89999999998654321 1122468999999999998899999999999999999999999997642210 0
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......... ... ......+++.+.+++.+||+.||++|||+.|++++
T Consensus 220 ~~~~~~~~~----------~~~--------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 220 LTNISAVNY----------DFD--------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHTTCC----------CCC--------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHhHhccc----------CCc--------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 100000000 000 01112335678999999999999999999999985
No 189
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=358.31 Aligned_cols=255 Identities=23% Similarity=0.367 Sum_probs=195.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCC--CCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRH--RNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++| |||+++++++...
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~---- 81 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD---- 81 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC----
Confidence 3467999999999999999999985 688999999975433 334678899999999976 9999999998755
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
...++|||+ .+++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+||+
T Consensus 82 -~~~~lv~e~-~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~ 149 (343)
T 3dbq_A 82 -QYIYMVMEC-GNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLI 149 (343)
T ss_dssp -SEEEEEECC-CSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEEC
T ss_pred -CEEEEEEeC-CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEe
Confidence 678999995 5779999998754 689999999999999999999999 999999999999997 6789999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC-----------CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-----------SEASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 150 DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 223 (343)
T 3dbq_A 150 DFGIANQMQPDTT------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223 (343)
T ss_dssp CCSSSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ecccccccCcccc------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence 9999986643221 111223579999999999864 57889999999999999999999999753
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
.................. .....+..+.+++.+||+.||.+|||+.|+++|-.
T Consensus 224 ~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 224 INQISKLHAIIDPNHEIE--------------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CSHHHHHHHHHCTTSCCC--------------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred hhHHHHHHHHhcCCcccC--------------------------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 221111111110000000 00011346789999999999999999999998743
No 190
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=347.46 Aligned_cols=253 Identities=24% Similarity=0.396 Sum_probs=186.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS----- 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-----
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-----
Confidence 3468999999999999999999998899999999997432 23347789999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 155 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIAD 155 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEecCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEe
Confidence 67899999999999999998654 2689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||.+........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ . ..
T Consensus 156 fg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~---~~ 223 (278)
T 3cok_A 156 FGLATQLKMPHE--------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L---NK 223 (278)
T ss_dssp CTTCEECC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------
T ss_pred ecceeeccCCCC--------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H---HH
Confidence 999986542211 11224689999999999988899999999999999999999999976432211 0 00
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
. .... .. ....++.++.+++.+||+.||++|||+.|++++-
T Consensus 224 ~-~~~~---~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 264 (278)
T 3cok_A 224 V-VLAD---YE---------------------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHP 264 (278)
T ss_dssp C-CSSC---CC---------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred H-hhcc---cC---------------------CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCc
Confidence 0 0000 00 0011245688999999999999999999998753
No 191
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.8e-39 Score=358.46 Aligned_cols=279 Identities=23% Similarity=0.314 Sum_probs=204.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc--hHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.++||+|+||.||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++... +.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK-----KR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-----CE
Confidence 46899999999999999999999999999999998654432 345678999999999999999999998765 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.++||||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 899999999999988876543 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
++........ ......||+.|+|||++.+. .++.++||||+||++|+|++|+.||......... ......
T Consensus 170 ~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~ 240 (331)
T 4aaa_A 170 FARTLAAPGE--------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL-YHIMMC 240 (331)
T ss_dssp TC--------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHH
T ss_pred CceeecCCcc--------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHH
Confidence 9976543211 11224689999999999775 6899999999999999999999999765332111 111111
Q ss_pred h--cCchhhhhccch-hhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 941 A--LPEKVIEIVDPL-LLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 941 ~--~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
. ..+......... ......................+++.+.+++.+||+.||++|||+.|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 308 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 000000000000 0000000000000001112224567899999999999999999999998763
No 192
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.9e-39 Score=362.07 Aligned_cols=279 Identities=20% Similarity=0.261 Sum_probs=192.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 779 (1017)
..++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+++.+|+++++.++||||+++++++..... ...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3578999999999999999999999999999999986432 2345678899999999999999999999865321 122
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp CCCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEee
Confidence 5579999999 67999988652 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+....
T Consensus 176 FG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~ 243 (367)
T 2fst_X 176 FGLARHTADE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLIL 243 (367)
T ss_dssp --------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred cccccccccc-----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 9999764321 123578999999999877 67899999999999999999999999764322 1122222
Q ss_pred HhhcCc--hhhhhccchhhHHHHhhcc-hhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 939 KIALPE--KVIEIVDPLLLIEVMANNS-MIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 939 ~~~~~~--~~~~~~d~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...... .....+.......+..... ............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 244 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 244 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 211111 1111111111111111000 00001111222346778999999999999999999999986
No 193
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.4e-38 Score=353.08 Aligned_cols=274 Identities=20% Similarity=0.272 Sum_probs=206.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++... ..+.+.+|++++++++ ||||+++++++.... ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCce
Confidence 46899999999999999999999999999999998633 3467889999999997 999999999986532 2568
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC-CeEEeecc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-VSHVGDFG 861 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG 861 (1017)
++||||+++++|.+++. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 109 ~lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg 176 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWG 176 (330)
T ss_dssp EEEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCC
Confidence 99999999999999885 478889999999999999999999 999999999999999776 89999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||................
T Consensus 177 ~a~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~ 247 (330)
T 3nsz_A 177 LAEFYHPGQ---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247 (330)
T ss_dssp TCEECCTTC---------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred CceEcCCCC---------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh
Confidence 998654322 1122468999999999877 678999999999999999999999996543332222222222
Q ss_pred hcCchhhhhccchh---h---HHHHhhc--chhHHHh-HHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 ALPEKVIEIVDPLL---L---IEVMANN--SMIQEDI-RAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l---~---~~~~~~~--~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...+...+.++... . .+..... ..+.... ......+++++.+++.+||+.||++|||++|+++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22222111111000 0 0000000 0000000 00111246788999999999999999999999986
No 194
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.2e-38 Score=362.46 Aligned_cols=253 Identities=23% Similarity=0.385 Sum_probs=195.4
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcC--CCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIR--HRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~ 779 (1017)
..+|++.+.||+|+||+||+|.+.. ++.||||++.... ....+.+.+|++++++++ ||||+++++++...
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~----- 128 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----- 128 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----
Confidence 3569999999999999999999874 8899999997543 234577899999999996 59999999998765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..|+||| +.+++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++ ++.+||+|
T Consensus 129 ~~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~D 197 (390)
T 2zmd_A 129 QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 197 (390)
T ss_dssp SEEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECC
T ss_pred CEEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEe
Confidence 66899999 56789999998754 678899999999999999999999 999999999999995 58999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccC-----------CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-----------SEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 198 FG~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 198 FGIANQMQPDTTS------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp CSSSCCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cCccccccCCCcc------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 9999866432211 11223579999999999865 368899999999999999999999997532
Q ss_pred ccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 929 TEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.. ...... ++++..... .....+..+.+++.+||+.||.+|||+.|++++-
T Consensus 272 ~~---~~~~~~---------~~~~~~~~~--------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 272 NQ---ISKLHA---------IIDPNHEIE--------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CH---HHHHHH---------HHCTTSCCC--------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HH---HHHHHH---------HhCccccCC--------------CCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 21 111111 111000000 0001134678999999999999999999998764
No 195
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.3e-38 Score=357.11 Aligned_cols=259 Identities=24% Similarity=0.349 Sum_probs=206.9
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--------chHHHHHHHHHHHHhc-CCCCceeee
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFKSFMAECKALRNI-RHRNLIKII 768 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~ 768 (1017)
.......++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 3445566789999999999999999999998999999999975432 1245678999999999 799999999
Q ss_pred eeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceE
Q 043932 769 TICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 848 (1017)
+++... ...++||||+++++|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+
T Consensus 167 ~~~~~~-----~~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl 232 (365)
T 2y7j_A 167 DSYESS-----SFMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENIL 232 (365)
T ss_dssp EEEEBS-----SEEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred EEEeeC-----CEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 998654 67899999999999999997543 689999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccC------CCcCccccchhHHHHHHHHHhCCC
Q 043932 849 LDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG------SEASMTGDVYSFGILLLELFTGRR 922 (1017)
Q Consensus 849 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~elltg~~ 922 (1017)
++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 233 ~~~~~~ikl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 233 LDDNMQIRLSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp ECTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred ECCCCCEEEEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 9999999999999998664322 1123579999999999863 358899999999999999999999
Q ss_pred CCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 043932 923 PTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV 1002 (1017)
Q Consensus 923 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1002 (1017)
||...... .............. ......++..+.+++.+||+.||++|||+.|++
T Consensus 304 pf~~~~~~-~~~~~i~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell 358 (365)
T 2y7j_A 304 PFWHRRQI-LMLRMIMEGQYQFS------------------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358 (365)
T ss_dssp SSCCSSHH-HHHHHHHHTCCCCC------------------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCHH-HHHHHHHhCCCCCC------------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 99753211 00000000000000 001122356789999999999999999999999
Q ss_pred HH
Q 043932 1003 AK 1004 (1017)
Q Consensus 1003 ~~ 1004 (1017)
++
T Consensus 359 ~h 360 (365)
T 2y7j_A 359 QH 360 (365)
T ss_dssp HS
T ss_pred cC
Confidence 75
No 196
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.4e-38 Score=371.88 Aligned_cols=258 Identities=23% Similarity=0.350 Sum_probs=207.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|.+.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-----~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK-----T 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC-----C
Confidence 367999999999999999999999999999999997432 23456788999999999999999999998664 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||++||+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~--~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSST--TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeccCCCHHHHHHHhhc--ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 78999999999999999976532 123689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 334 Gla~~~~~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~ 404 (543)
T 3c4z_A 334 GLAVELKAGQT--------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR 404 (543)
T ss_dssp TTCEECCTTCC--------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH
T ss_pred ceeeeccCCCc--------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH
Confidence 99986543221 1223579999999999999999999999999999999999999997643221 11111111
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM-----RDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 1004 (1017)
..... . .....+++.+.+++.+||+.||++||++ .|+++|
T Consensus 405 i~~~~-----------------~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 405 VLEQA-----------------V-------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHCC-----------------C-------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred Hhhcc-----------------c-------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 00000 0 0011235678899999999999999964 677654
No 197
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1e-38 Score=351.45 Aligned_cols=254 Identities=23% Similarity=0.290 Sum_probs=203.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|.+.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST-----THY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC-----CEE
Confidence 356899999999999999999999999999999999865544456788999999999999999999998654 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEee
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGD 859 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 859 (1017)
++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred EEEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEcc
Confidence 99999999999999987643 689999999999999999999999 99999999999999 7889999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... .......
T Consensus 153 fg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~ 221 (304)
T 2jam_A 153 FGLSKMEQNG----------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKE 221 (304)
T ss_dssp CSTTCCCCCB----------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred CCcceecCCC----------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHc
Confidence 9998754321 1122468999999999999899999999999999999999999997542210 0111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.... . . ......+++.+.+++.+||+.||++|||+.|++++-
T Consensus 222 ~~~~-----~-~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 222 GYYE-----F-E------------------SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp CCCC-----C-C------------------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCC-----C-C------------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0000 0 0 001112356789999999999999999999998753
No 198
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1e-38 Score=356.22 Aligned_cols=268 Identities=24% Similarity=0.392 Sum_probs=210.2
Q ss_pred hhccccccCcccccCCceEEEEEeC-------CCcEEEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeeeeeeec
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILG-------EDEMIVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKIITICSS 773 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 773 (1017)
..++|++.+.||+|+||+||+|++. .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4578999999999999999999975 3567899999975432 3456788999999999 89999999999865
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 843 (1017)
. +..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 113 ~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 184 (334)
T 2pvf_A 113 D-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 184 (334)
T ss_dssp S-----SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred C-----CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCc
Confidence 4 5689999999999999999875421 1123589999999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCC
Q 043932 844 PSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRR 922 (1017)
Q Consensus 844 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~ 922 (1017)
|+||+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~ 258 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSSEE------CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred cceEEEcCCCCEEEcccccccccccccccc------ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998665332111 1122457889999999988889999999999999999999 999
Q ss_pred CCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 043932 923 PTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV 1002 (1017)
Q Consensus 923 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1002 (1017)
||....... ........... .....++..+.+++.+||+.||.+|||+.|++
T Consensus 259 p~~~~~~~~--~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 310 (334)
T 2pvf_A 259 PYPGIPVEE--LFKLLKEGHRM--------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310 (334)
T ss_dssp SSTTCCHHH--HHHHHHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CcCcCCHHH--HHHHHhcCCCC--------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 997542210 00000000000 01112356789999999999999999999999
Q ss_pred HHHhhccccc
Q 043932 1003 AKLCHTRETF 1012 (1017)
Q Consensus 1003 ~~L~~~~~~~ 1012 (1017)
++|+.+.+..
T Consensus 311 ~~L~~l~~~~ 320 (334)
T 2pvf_A 311 EDLDRILTLT 320 (334)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999987543
No 199
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.5e-38 Score=355.88 Aligned_cols=288 Identities=23% Similarity=0.307 Sum_probs=207.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCC---CC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDS---KG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 778 (1017)
.++|++.++||+|+||+||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4689999999999999999999999999999999864432 234678899999999999999999999876432 11
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
.+..++||||+++ +|.+.+..... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 3568999999976 88888766542 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|||+++.+....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .....
T Consensus 167 Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQ----PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp CCTTCEECCCCSSSS----CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred cchhccccccccccc----ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 999998765322111 112233578999999999876 458999999999999999999999998643221 11111
Q ss_pred HHhh--cCchhhhhccchhhHHHHhhc--chhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 938 AKIA--LPEKVIEIVDPLLLIEVMANN--SMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 938 ~~~~--~~~~~~~~~d~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
.... .+.......+........... ...............+.+.+++.+||+.||++|||+.|+++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 1111 111111111100000000000 0000000001111246689999999999999999999999874
No 200
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=354.89 Aligned_cols=263 Identities=27% Similarity=0.442 Sum_probs=202.4
Q ss_pred hccccccCcccccCCceEEEEEeCCC----cEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGED----EMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
.++|++.+.||+|+||+||+|++..+ +..||+|++..... .....+.+|++++++++||||+++++++...
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 118 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY---- 118 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS----
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC----
Confidence 35788889999999999999998644 35699999975432 3346788999999999999999999998654
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++|+|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 119 -~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~ 189 (333)
T 1mqb_A 119 -KPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVS 189 (333)
T ss_dssp -SSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred -CCcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEEC
Confidence 668999999999999999986542 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||+++......... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 190 Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~ 262 (333)
T 1mqb_A 190 DFGLSRVLEDDPEAT-----YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKA 262 (333)
T ss_dssp CCCC----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH
T ss_pred CCCcchhhccccccc-----cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHH
Confidence 999998764322111 11112346889999999998899999999999999999999 999996532210 0000
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
...... ......+++.+.+++.+||+.||++||++.|++++|+.+.+..
T Consensus 263 ~~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 263 INDGFR--------------------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHTTCC--------------------------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHCCCc--------------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 000000 0001123567899999999999999999999999999876543
No 201
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5e-39 Score=358.97 Aligned_cols=276 Identities=21% Similarity=0.314 Sum_probs=215.5
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcE-----EEEEEEeeecCc-chHHHHHHHHHHHHhc-CCCCceeeeeee
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEM-----IVAVKVINLKQK-GAFKSFMAECKALRNI-RHRNLIKIITIC 771 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 771 (1017)
++....++|++.+.||+|+||.||+|.+..++. .||+|++..... ...+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344556789999999999999999999876553 799999975432 3456789999999999 899999999998
Q ss_pred ecCCCCCCceeEEEEEeccCCCHHHHHhhCCCC--------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCC
Q 043932 772 SSIDSKGADFKALVFECMKNGSLEDWLHQSNDH--------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLK 843 (1017)
Q Consensus 772 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 843 (1017)
... +..++||||+++|+|.+++...... .....+++..++.++.||+.||+|||++ +|+|||||
T Consensus 120 ~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 191 (333)
T 2i1m_A 120 THG-----GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191 (333)
T ss_dssp CSS-----SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred ecC-----CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcc
Confidence 654 5689999999999999999754210 0123579999999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCC
Q 043932 844 PSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRR 922 (1017)
Q Consensus 844 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~ 922 (1017)
|+||+++.++.+||+|||++......... .......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 265 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred cceEEECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999865432211 11122457889999999988889999999999999999999 999
Q ss_pred CCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 043932 923 PTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV 1002 (1017)
Q Consensus 923 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1002 (1017)
||........ ............ ....+++.+.+++.+||+.||.+|||+.|++
T Consensus 266 p~~~~~~~~~-~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~ 318 (333)
T 2i1m_A 266 PYPGILVNSK-FYKLVKDGYQMA--------------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQIC 318 (333)
T ss_dssp SSTTCCSSHH-HHHHHHHTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCcccchhHH-HHHHHhcCCCCC--------------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 9976432211 111111111000 0011245788999999999999999999999
Q ss_pred HHHhhcccccccc
Q 043932 1003 AKLCHTRETFFGR 1015 (1017)
Q Consensus 1003 ~~L~~~~~~~~~~ 1015 (1017)
++|+++.+.....
T Consensus 319 ~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 319 SFLQEQAQEDRRE 331 (333)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc
Confidence 9999987765443
No 202
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.2e-38 Score=372.07 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=204.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.++||+|+||+||+|++..+++.||||++.... ......+.+|++++++++||||+++++++... .
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----S 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC-----C
Confidence 3568999999999999999999999999999999996432 33457889999999999999999999998754 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC---CCCCeEE
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD---HDMVSHV 857 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl 857 (1017)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999987653 689999999999999999999999 999999999999995 4568999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||....... .....
T Consensus 166 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i 234 (486)
T 3mwu_A 166 IDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRV 234 (486)
T ss_dssp CSCSCTTTBCCC-------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred EECCcCeECCCCC---------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 9999998654321 1223569999999999876 58999999999999999999999997642211 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.....+.. ......+++.+.+++.+||+.||.+|||+.|+++|
T Consensus 235 ~~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 235 ETGKYAFD------------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHTCCCSC------------------------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HhCCCCCC------------------------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111000 00112235678899999999999999999999987
No 203
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-39 Score=364.17 Aligned_cols=283 Identities=18% Similarity=0.220 Sum_probs=201.6
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC----
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS---- 776 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 776 (1017)
....++|++.++||+|+||+||+|++..+++.||||++...... ..+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999999999999999998644322 2479999999999999999999865432
Q ss_pred -----------------------------CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHH
Q 043932 777 -----------------------------KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIE 827 (1017)
Q Consensus 777 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~ 827 (1017)
.+..+.++||||+++ +|.+.+..... ....+++..+..++.||+.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR--SGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHH
Confidence 234568899999985 88877764211 1237899999999999999999
Q ss_pred HHhhCCCCCceeecCCCCceEeC-CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCccc
Q 043932 828 YLHHHCQPPMVHGDLKPSNVLLD-HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTG 905 (1017)
Q Consensus 828 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 905 (1017)
|||++ +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+. .++.++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~ 223 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATEYTPSI 223 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSSCCTHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCCCCcch
Confidence 99999 999999999999997 68999999999998664322 11235689999999998775 489999
Q ss_pred cchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhh--ccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHH
Q 043932 906 DVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEI--VDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRI 983 (1017)
Q Consensus 906 DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 983 (1017)
||||+||++|||++|+.||......+ ................+ .++..... .................+++.+.++
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEV-RFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--C-CCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccc-cCCccCcccHHhhCCCCCCHHHHHH
Confidence 99999999999999999998643322 12222221111110000 00000000 0000000000011122346678999
Q ss_pred HhhccCCCCCCCCCHHHHHHH
Q 043932 984 GVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 984 i~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+.+||+.||++|||+.|+++|
T Consensus 302 i~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHccCChhhCCCHHHHhcC
Confidence 999999999999999999865
No 204
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.1e-39 Score=355.35 Aligned_cols=280 Identities=25% Similarity=0.363 Sum_probs=212.3
Q ss_pred hccc-cccCcccccCCceEEEEEe----CCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEF-ASSNMIGQGSFGSVYKGIL----GEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++| ++.+.||+|+||+||+|.+ ..+++.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (318)
T 3lxp_A 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG-- 106 (318)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--
T ss_pred cHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC--
Confidence 3455 9999999999999988764 34789999999975432 34567899999999999999999999987542
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
....++||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 107 -~~~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 107 -AASLQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp -TTEEEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred -CceEEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 36789999999999999999764 489999999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||++.......... .......||..|+|||++.+..++.++||||+|+++|||++|+.||....... .
T Consensus 176 ~Dfg~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-----~ 245 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYY-----RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-----L 245 (318)
T ss_dssp CCGGGCEECCTTCSEE-----EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-----H
T ss_pred CCcccccccccccccc-----ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-----h
Confidence 9999998765432111 11122458889999999998889999999999999999999999986532110 0
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1014 (1017)
............. .......... .......+++++.+++.+||+.||++|||+.|+++.|+.+.+++.+
T Consensus 246 ~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 246 ELIGIAQGQMTVL---RLTELLERGE-----RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHCSCCHHHHHH---HHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hhhcccccchhHH---HHHHHHhccc-----CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 0000000000000 0000000000 0011223567899999999999999999999999999999887754
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-38 Score=357.94 Aligned_cols=280 Identities=18% Similarity=0.192 Sum_probs=200.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999999999999999997532 2345678899999999999999999999865432 2234
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++ +|.+++.. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 78999999975 88888852 578899999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 172 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 241 (371)
T 2xrw_A 172 GLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQ 241 (371)
T ss_dssp CC-------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-
T ss_pred eccccccccc---------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 9998654221 1123578999999999999899999999999999999999999997643211 11111111
Q ss_pred hcC--chhhhhccchhhHHHHhhcc----hhH--------HHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 941 ALP--EKVIEIVDPLLLIEVMANNS----MIQ--------EDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 941 ~~~--~~~~~~~d~~l~~~~~~~~~----~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
... ......+.+........... .+. +.........++.+.+++.+||+.||++|||+.|+++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000 00111111111000000000 000 000112234567899999999999999999999999864
No 206
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.9e-38 Score=346.92 Aligned_cols=264 Identities=23% Similarity=0.345 Sum_probs=208.3
Q ss_pred HHhhccccccC-cccccCCceEEEEE--eCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCC
Q 043932 701 SKATSEFASSN-MIGQGSFGSVYKGI--LGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSID 775 (1017)
Q Consensus 701 ~~~~~~y~~~~-~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1017)
....++|++.+ .||+|+||+||+|. ...+++.||||++.... ....+++.+|++++++++||||+++++++..
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 89 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-- 89 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC--
Confidence 33456888888 99999999999995 45678899999997543 2335788999999999999999999999832
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCe
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
+..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 90 ----~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~ 156 (291)
T 1xbb_A 90 ----ESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYA 156 (291)
T ss_dssp ----SSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ----CCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcE
Confidence 45789999999999999998753 689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccH
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTL 934 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~ 934 (1017)
||+|||++........... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 157 kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~ 229 (291)
T 1xbb_A 157 KISDFGLSKALRADENYYK-----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EV 229 (291)
T ss_dssp EECCCTTCEECCTTCSEEE-----C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH
T ss_pred EEccCCcceeeccCCCccc-----ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HH
Confidence 9999999987643321111 1112346789999999988889999999999999999999 99999764221 11
Q ss_pred HHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 935 HEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 935 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.......... .....+++.+.+++.+||+.||++||++.|+++.|+.+..+.
T Consensus 230 ~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 230 TAMLEKGERM--------------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCC--------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1111100000 001133567899999999999999999999999999887654
No 207
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=344.27 Aligned_cols=263 Identities=22% Similarity=0.354 Sum_probs=209.6
Q ss_pred hccccccC-cccccCCceEEEEEeC--CCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 704 TSEFASSN-MIGQGSFGSVYKGILG--EDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 704 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
.++|.+.+ .||+|+||.||+|.+. .++..||+|++.... ....+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------
Confidence 45677766 9999999999999864 467889999997543 3345778999999999999999999999832
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~D 153 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISD 153 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECC
T ss_pred CCcEEEEEeCCCCCHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECc
Confidence 44799999999999999997543 2689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||++.......... .......||+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ......
T Consensus 154 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i 226 (287)
T 1u59_A 154 FGLSKALGADDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFI 226 (287)
T ss_dssp CTTCEECTTCSCEE-----CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHH
T ss_pred ccceeeeccCccee-----eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHH
Confidence 99998764332111 11122357899999999988889999999999999999998 99999764221 111111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFF 1013 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1013 (1017)
...... .....+++.+.+++.+||+.||++||++.|++++|+.+..+..
T Consensus 227 ~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 227 EQGKRM--------------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp HTTCCC--------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hcCCcC--------------------------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 100000 0111346678999999999999999999999999999876554
No 208
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2e-38 Score=345.53 Aligned_cols=258 Identities=22% Similarity=0.343 Sum_probs=207.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC------
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS------ 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 776 (1017)
...+|++.+.||+|+||.||+|++..+++.||+|++.... +.+.+|++++++++||||+++++++...+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4568999999999999999999999899999999997543 346789999999999999999998754211
Q ss_pred -----CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC
Q 043932 777 -----KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH 851 (1017)
Q Consensus 777 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 851 (1017)
......++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR----GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG----GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 12356899999999999999997643 13689999999999999999999999 9999999999999999
Q ss_pred CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccC
Q 043932 852 DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEG 931 (1017)
Q Consensus 852 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~ 931 (1017)
++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|..|+....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--- 225 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--- 225 (284)
T ss_dssp TTEEEECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---
T ss_pred CCCEEECcchhheeccccc---------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---
Confidence 9999999999998664322 1122468999999999999899999999999999999999998864311
Q ss_pred ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 932 LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
..... ..+.. ....++..+.+++.+||+.||.+|||+.|++++|+.++++
T Consensus 226 ----~~~~~--------~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 226 ----KFFTD--------LRDGI------------------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ----HHHHH--------HHTTC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ----HHHHH--------hhccc------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 00000 00000 0011245678999999999999999999999999998876
Q ss_pred cc
Q 043932 1012 FF 1013 (1017)
Q Consensus 1012 ~~ 1013 (1017)
..
T Consensus 276 ~~ 277 (284)
T 2a19_B 276 PE 277 (284)
T ss_dssp --
T ss_pred CC
Confidence 43
No 209
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=352.25 Aligned_cols=283 Identities=20% Similarity=0.294 Sum_probs=202.0
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-------
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS------- 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 776 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++........+++.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 4689999999999999999999999999999999987766667889999999999999999999998754311
Q ss_pred --CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC-CCC
Q 043932 777 --KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDM 853 (1017)
Q Consensus 777 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 853 (1017)
......++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 22367899999997 5999998653 588999999999999999999999 999999999999997 567
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGL 932 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~ 932 (1017)
.+||+|||+++........ ........||..|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 232 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSH-----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE- 232 (320)
T ss_dssp EEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred eEEEccCccccccCCCccc-----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 9999999999866432111 111223467999999998865 678999999999999999999999997643221
Q ss_pred cHHHHHHhhc-Cc--hhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 933 TLHEFAKIAL-PE--KVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 933 ~~~~~~~~~~-~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.......... .. ...+.... ......................+++++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSV-IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTT-SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhcCCCchhhhhhhhhc-CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 1111111100 00 00000000 000000000000000111222456789999999999999999999999876
No 210
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=367.80 Aligned_cols=330 Identities=22% Similarity=0.221 Sum_probs=222.1
Q ss_pred ccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcc
Q 043932 271 NLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSL 350 (1017)
Q Consensus 271 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 350 (1017)
+++.|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|+++..... .+.++++|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L 106 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG------VFTGLSNL 106 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT------SSTTCTTC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc------cccCCCCC
Confidence 445555555555544445555555555555555555555555555555555555555555433322 13345555
Q ss_pred cEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccc
Q 043932 351 KILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYK 430 (1017)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 430 (1017)
++|+|++|++.+..|..+..+ .+|++|++++|.++++.+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 185 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDL-YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTC-TTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEES
T ss_pred CEEECCCCccccCChhHcccc-ccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCC
Confidence 555555555554333333332 2355555555555555566666666677777777766666666666666666666666
Q ss_pred cccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCc
Q 043932 431 NVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSL 510 (1017)
Q Consensus 431 N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~ 510 (1017)
|.+++..+..|.++++|++|++++|.+.+.+|.......+|+.|++++|+++ +..
T Consensus 186 n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-------------------------~~~ 240 (477)
T 2id5_A 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-------------------------AVP 240 (477)
T ss_dssp CCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-------------------------SCC
T ss_pred CcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-------------------------ccC
Confidence 6666655566666666666666666655555555444445555555555554 333
Q ss_pred cccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccC
Q 043932 511 PLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLS 590 (1017)
Q Consensus 511 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 590 (1017)
+..+..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..++
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 35678889999999999999988888899999999999999999999999999999999999999999988888889999
Q ss_pred CCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcCC
Q 043932 591 FLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTDE 632 (1017)
Q Consensus 591 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 632 (1017)
+|+.|+|++|++.+.++..+.+.......+.++...|+.|..
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 999999999999988775444444555678888889987764
No 211
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=344.85 Aligned_cols=255 Identities=22% Similarity=0.330 Sum_probs=200.5
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
++|....+||+|+||.||+|++..+++.||+|++........+.+.+|+.+++.++||||+++++++... +..++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 96 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-----GFIKI 96 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-----CcEEE
Confidence 3455566999999999999999999999999999876666668899999999999999999999998765 67899
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC-CCCeEEeecccc
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-DMVSHVGDFGLA 863 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a 863 (1017)
||||+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||.+
T Consensus 97 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~ 170 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTS 170 (295)
T ss_dssp EEECCSEEEHHHHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred EEEeCCCCCHHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccc
Confidence 9999999999999987532 23567889999999999999999999 9999999999999987 899999999999
Q ss_pred cccccccccccccCCCcccccccCccccCcccccCCC--cCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 864 KFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE--ASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
....... .......||+.|+|||++.+.. ++.++||||||+++|+|++|+.||.................
T Consensus 171 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 242 (295)
T 2clq_A 171 KRLAGIN--------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242 (295)
T ss_dssp EESCC-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC
T ss_pred cccCCCC--------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc
Confidence 8654321 1112356899999999987643 78999999999999999999999965322111000000000
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. + .....+++++.+++.+||+.||++||++.|++++
T Consensus 243 ~~--------~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 VH--------P------------------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CC--------C------------------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cc--------c------------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0 0111235678899999999999999999999875
No 212
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-38 Score=358.85 Aligned_cols=277 Identities=21% Similarity=0.316 Sum_probs=205.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... +..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-----TEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-----CEE
Confidence 458999999999999999999999999999999997553 33456789999999999999999999998765 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 178 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 178 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred EEEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCC
Confidence 99999999999999998653 6899999999999999999999831 799999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhc
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........
T Consensus 179 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~ 246 (360)
T 3eqc_A 179 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQV 246 (360)
T ss_dssp CHHHHHHC--------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC---
T ss_pred Cccccccc----------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccc
Confidence 97553211 1224689999999999999999999999999999999999999976432211 00000000
Q ss_pred Cchhhhhc-cchh----hHHHH--h-hcchhHHHhH---------HhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 943 PEKVIEIV-DPLL----LIEVM--A-NNSMIQEDIR---------AKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 943 ~~~~~~~~-d~~l----~~~~~--~-~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
........ .... ...+. . .......... .....++.++.+++.+||+.||++|||+.|+++|-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 247 EGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00000000 0000 00000 0 0000000000 00112356789999999999999999999998864
No 213
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=357.65 Aligned_cols=274 Identities=18% Similarity=0.209 Sum_probs=196.8
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCC--
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDS-- 776 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-- 776 (1017)
+.....+|++.++||+|+||.||+|++..+++.||+|++........+.+.+|+.+++++. ||||+++++++.....
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3344568999999999999999999999999999999997666666678899999999996 9999999999853322
Q ss_pred -CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeecCCCCceEeCCCC
Q 043932 777 -KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--MVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 777 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~ 853 (1017)
......++||||++ |+|.+++.... ....+++.+++.++.||+.||+|||++ + |+||||||+||+++.++
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKME---SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHH---TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTS
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCC
Confidence 33466899999996 69999987522 113689999999999999999999999 8 99999999999999999
Q ss_pred CeEEeeccccccccccccccccc----CCCcccccccCccccCcccc---cCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASK----TSSSSIGIKGTVGYVAPEYC---MGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
.+||+|||+++............ .........||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 99999999998765432111000 00111234689999999998 566789999999999999999999999965
Q ss_pred ccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 927 AFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
..... .......... ...++..+.+++.+||+.||++|||+.|++++|+
T Consensus 256 ~~~~~-----~~~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 256 GAKLR-----IVNGKYSIPP--------------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------CCCCT--------------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhHHH-----hhcCcccCCc--------------------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 32210 0000000000 0011334778999999999999999999999999
Q ss_pred hcccc
Q 043932 1007 HTRET 1011 (1017)
Q Consensus 1007 ~~~~~ 1011 (1017)
.+.+.
T Consensus 305 ~~~~~ 309 (337)
T 3ll6_A 305 EIAAA 309 (337)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88754
No 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.4e-38 Score=372.28 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=200.4
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.++||+|+||+||+|++..++..||+|++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 109 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK-----R 109 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 3568999999999999999999999999999999997543 33457789999999999999999999998754 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC---CCeEE
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVSHV 857 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 857 (1017)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.. +.+||
T Consensus 110 ~~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 180 (494)
T 3lij_A 110 NYYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKI 180 (494)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEE
Confidence 7899999999999999887653 689999999999999999999999 99999999999999764 55999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||....... .....
T Consensus 181 ~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i 249 (494)
T 3lij_A 181 VDFGLSAVFENQK---------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKV 249 (494)
T ss_dssp CCCTTCEECBTTB---------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred EECCCCeECCCCc---------cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 9999998664322 1223569999999998864 69999999999999999999999997643211 11111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
........ ......+++.+.+++.+||+.||.+|||+.|+++|
T Consensus 250 ~~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 250 EKGKYTFD------------------------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHTCCCCC------------------------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HhCCCCCC------------------------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111000 00112235678899999999999999999999876
No 215
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.1e-38 Score=343.96 Aligned_cols=248 Identities=22% Similarity=0.349 Sum_probs=204.6
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... +
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR-----K 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-----C
Confidence 468999999999999999999999999999999996432 23346788999999999999999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 7899999999999999998653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|++....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ........
T Consensus 159 g~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 227 (284)
T 2vgo_A 159 GWSVHAPSLR----------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVNV 227 (284)
T ss_dssp TTCEECSSSC----------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTT
T ss_pred cccccCcccc----------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhcc
Confidence 9987543211 123568999999999999899999999999999999999999997542211 00000000
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+. . .....+..+.+++.+|++.||.+||++.|++++
T Consensus 228 ----------~~-----------~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 ----------DL-----------K-------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----------CC-----------C-------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----------cc-----------C-------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 00 0 001224568899999999999999999999875
No 216
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-38 Score=354.52 Aligned_cols=267 Identities=16% Similarity=0.212 Sum_probs=209.8
Q ss_pred CCcCHHHHHHhhcccccc-CcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhc-CCCCceeee
Q 043932 693 PTVSYAELSKATSEFASS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNI-RHRNLIKII 768 (1017)
Q Consensus 693 ~~~~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~ 768 (1017)
+.+.+.......++|.+. +.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++++ .||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344555556677788887 89999999999999999999999999997433 33457889999999999 579999999
Q ss_pred eeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceE
Q 043932 769 TICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVL 848 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 848 (1017)
+++... +..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+
T Consensus 96 ~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl 163 (327)
T 3lm5_A 96 EVYENT-----SEIILILEYAAGGEIFSLCLPEL----AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNIL 163 (327)
T ss_dssp EEEECS-----SEEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred EEEEeC-----CeEEEEEEecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEE
Confidence 998654 67899999999999999986542 13689999999999999999999999 9999999999999
Q ss_pred eCC---CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCC
Q 043932 849 LDH---DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 849 l~~---~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~ 925 (1017)
++. ++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 164 ~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (327)
T 3lm5_A 164 LSSIYPLGDIKIVDFGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234 (327)
T ss_dssp ESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EecCCCCCcEEEeeCccccccCCcc---------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 988 7899999999998664321 1122569999999999999899999999999999999999999997
Q ss_pred cccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 926 AAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
....... ............ ......+++.+.+++.+||+.||++|||+.|++++-
T Consensus 235 ~~~~~~~-~~~i~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 235 GEDNQET-YLNISQVNVDYS------------------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp CSSHHHH-HHHHHHTCCCCC------------------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred CCCchHH-HHHHHhcccccC------------------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 6422111 111111000000 001122356788999999999999999999998763
No 217
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.6e-38 Score=356.30 Aligned_cols=290 Identities=22% Similarity=0.257 Sum_probs=209.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
..++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|++++++++||||+++++++..........
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 35689999999999999999999999999999999964433 33467889999999999999999999986654444567
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.++||||++ ++|.+++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeccC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 899999997 5999998763 689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccc--CCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 862 LAKFLSSHQLDTASK--TSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
++............. .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .....
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~ 236 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIF 236 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHH
Confidence 998765332111110 1111223578999999998765 6789999999999999999999999976432211 11111
Q ss_pred Hhhc-Cc--hhhhhccchhhHHHHhhc-chhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 939 KIAL-PE--KVIEIVDPLLLIEVMANN-SMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 939 ~~~~-~~--~~~~~~d~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.... +. ............++.... .............+++++.+++.+||+.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1111 10 000001100000100000 000000111223456788999999999999999999999986
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.1e-38 Score=350.54 Aligned_cols=254 Identities=23% Similarity=0.291 Sum_probs=200.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--------cchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--------KGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
..++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3568999999999999999999999999999999986432 12234578999999999999999999998542
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
..++||||+++++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 88 ------~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 88 ------DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp ------SEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred ------ceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 3799999999999999987653 689999999999999999999999 9999999999999987664
Q ss_pred ---eEEeecccccccccccccccccCCCcccccccCccccCccccc---CCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 855 ---SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM---GSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 855 ---~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
+||+|||+++...... ......||+.|+|||++. +..++.++||||+||++|+|++|+.||....
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp SCCEEECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred CCeEEEccCccceeccccc---------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9999999998654321 112246899999999873 4578999999999999999999999997643
Q ss_pred ccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 929 TEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
................ .......+++.+.+++.+||+.||++||++.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 224 TQVSLKDQITSGKYNF------------------------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CSSCHHHHHHHTCCCC------------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHHHHHHHHHhCcccc------------------------CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 3222111111111000 001112345678999999999999999999999875
No 219
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9e-38 Score=362.10 Aligned_cols=270 Identities=23% Similarity=0.305 Sum_probs=208.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeE
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
.++|++.++||+|+||.||+|++..+++.||||++...... +++.+|+++++.++|++.+..+.++... .+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~----~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVE----GDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEE----TTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEee----CCEEE
Confidence 46899999999999999999999989999999998754332 4578899999999875544444443322 26789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeEEeec
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSHVGDF 860 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 860 (1017)
+||||+ +++|.+++..... .+++.+++.|+.||+.||+|||++ +||||||||+|||+ +.++.+||+||
T Consensus 80 lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999999 8899999986442 789999999999999999999999 99999999999999 68899999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
|+++.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 151 Gla~~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i 228 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHI-PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKI 228 (483)
T ss_dssp TTCEECBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHH
T ss_pred CcceeccCCcccccc-ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHH
Confidence 999876543321111 11122346799999999999999999999999999999999999999976432211 1111000
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
.... ...........+++++.+++..||+.||++||++.+|++.|+++..
T Consensus 229 -~~~~-------------------~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 229 -SEKK-------------------VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -HHHH-------------------HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -hhcc-------------------ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0000 0000111123446789999999999999999999999999998865
No 220
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.4e-38 Score=343.98 Aligned_cols=265 Identities=24% Similarity=0.425 Sum_probs=210.7
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
+....++|++.+.||+|+||.||+|++. ++..||+|++.... ...+.+.+|++++++++||||+++++++..
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 79 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------ 79 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC------
Confidence 3444578999999999999999999986 67789999987543 335788999999999999999999998753
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred CCcEEEEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECC
Confidence 34789999999999999997532 13689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||.+.......... .....++..|+|||++.+..++.++||||+|+++|||++ |+.||....... .....
T Consensus 153 fg~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~ 223 (279)
T 1qpc_A 153 FGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNL 223 (279)
T ss_dssp CTTCEECSSSCEEC-------CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH
T ss_pred CcccccccCccccc-------ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHH
Confidence 99998765332111 112457889999999988889999999999999999999 999987532210 00000
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFFG 1014 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 1014 (1017)
...... .....+++.+.+++.+|++.||++|||+.++++.|+++.....+
T Consensus 224 ~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 224 ERGYRM--------------------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp HTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred hcccCC--------------------------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 000000 00112356789999999999999999999999999998766543
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.8e-38 Score=349.27 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=201.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 91 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----GKL 91 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----CeE
Confidence 356899999999999999999999999999999999876666678899999999999999999999998754 568
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 92 ~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 163 (302)
T 2j7t_A 92 WIMIEFCPGGAVDAIMLELD-----RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 163 (302)
T ss_dssp EEEEECCTTEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHH
T ss_pred EEEEEeCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCC
Confidence 99999999999999987643 2689999999999999999999999 999999999999999999999999998
Q ss_pred ccccccccccccccCCCcccccccCccccCcccc-----cCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYC-----MGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+....... .......||+.|+|||++ .+..++.++||||+|+++|+|++|+.||....... .....
T Consensus 164 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~ 234 (302)
T 2j7t_A 164 SAKNLKTL--------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKI 234 (302)
T ss_dssp HHHHHHHH--------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred Cccccccc--------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHH
Confidence 76432111 011224689999999998 35678999999999999999999999997642211 01111
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.....+. . .....++..+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~----~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 235 AKSDPPT----L---------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHSCCCC----C---------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred hccCCcc----c---------------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1100000 0 0011235578899999999999999999999875
No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.2e-38 Score=356.71 Aligned_cols=287 Identities=20% Similarity=0.263 Sum_probs=208.1
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc-----------hHHHHHHHHHHHHhcCCCCce
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG-----------AFKSFMAECKALRNIRHRNLI 765 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv 765 (1017)
..++....++|++.+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4577788899999999999999999999987 4889999998643221 237789999999999999999
Q ss_pred eeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCC
Q 043932 766 KIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPS 845 (1017)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 845 (1017)
++++++...+.......++||||++ |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 163 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPG 163 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChH
Confidence 9999987765555678899999997 58988887554 2689999999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCC
Q 043932 846 NVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPT 924 (1017)
Q Consensus 846 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf 924 (1017)
||+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 234 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA---------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234 (362)
T ss_dssp GEEECTTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred HEEEcCCCCEEEEecCccccccccc---------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCC
Confidence 9999999999999999997543221 1123568999999999877 67899999999999999999999999
Q ss_pred CcccccCccHHHHHHhhcCchhhhh---ccchhhHHHHhhc-c-hhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 043932 925 DAAFTEGLTLHEFAKIALPEKVIEI---VDPLLLIEVMANN-S-MIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMR 999 (1017)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 999 (1017)
....... ................. ..+.. .++.... . ............+++.+.+++.+||+.||++|||+.
T Consensus 235 ~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 312 (362)
T 3pg1_A 235 RGSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSA-RDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312 (362)
T ss_dssp CCSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHH-HHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCHHH-HHHHHHHHcCCCChHHhhhccchhh-hHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 7643221 11111111111111110 00000 0000000 0 000001111223456789999999999999999999
Q ss_pred HHHHH
Q 043932 1000 DVVAK 1004 (1017)
Q Consensus 1000 evl~~ 1004 (1017)
|+++|
T Consensus 313 ell~h 317 (362)
T 3pg1_A 313 QALRH 317 (362)
T ss_dssp HHHTS
T ss_pred HHHcC
Confidence 99986
No 223
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=352.46 Aligned_cols=269 Identities=22% Similarity=0.335 Sum_probs=204.3
Q ss_pred CCcCHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeee
Q 043932 693 PTVSYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITIC 771 (1017)
Q Consensus 693 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 771 (1017)
..+++.++....++|++.+.||+|+||.||+|++..+++.||+|++..... ..+.+.+|+.+++++ +||||+++++++
T Consensus 12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 344555566678899999999999999999999998999999999975433 347788999999999 799999999998
Q ss_pred ecCCCCC-CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC
Q 043932 772 SSIDSKG-ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (1017)
Q Consensus 772 ~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 850 (1017)
......+ .+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~ 163 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLT 163 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEc
Confidence 7643211 367899999999999999998653 23689999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccccccccccccCCCcccccccCccccCccccc-----CCCcCccccchhHHHHHHHHHhCCCCCC
Q 043932 851 HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM-----GSEASMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 851 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~pf~ 925 (1017)
.++.+||+|||++....... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||.
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 235 (326)
T 2x7f_A 164 ENAEVKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235 (326)
T ss_dssp TTCCEEECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred CCCCEEEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 99999999999987654221 1112346899999999986 4568999999999999999999999996
Q ss_pred cccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 926 AAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...... ..........+ .. ....+++.+.+++.+||+.||.+||++.|++++
T Consensus 236 ~~~~~~-~~~~~~~~~~~---------~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 236 DMHPMR-ALFLIPRNPAP---------RL-----------------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp TSCHHH-HHHHHHHSCCC---------CC-----------------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCcHHH-HHHHhhcCccc---------cC-----------------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 532210 00000000000 00 001224678899999999999999999999885
No 224
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.9e-38 Score=346.11 Aligned_cols=252 Identities=20% Similarity=0.314 Sum_probs=206.6
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN----- 87 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC-----
Confidence 3568999999999999999999999999999999987542 23456788999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 158 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGD 158 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEe
Confidence 67899999999999999987643 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||.+....... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... .+..
T Consensus 159 fg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~ 226 (294)
T 2rku_A 159 FGLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLR 226 (294)
T ss_dssp CTTCEECCSTT--------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHH
T ss_pred ccCceecccCc--------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHH
Confidence 99998654221 11123568999999999998889999999999999999999999997642211 1110
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
..... .. ....+++.+.+++.+||+.||++|||+.|++++-
T Consensus 227 ~~~~~------------------~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 227 IKKNE------------------YS-------IPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHTTC------------------CC-------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred Hhhcc------------------CC-------CccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00000 00 0012245688999999999999999999998864
No 225
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.4e-39 Score=349.80 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=207.9
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT---NTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG---GTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC---Cce
Confidence 568999999999999999999999999999999997543 234567889999999999999999999875431 257
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCC-----ceeecCCCCceEeCCCCCeE
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP-----MVHGDLKPSNVLLDHDMVSH 856 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~k 856 (1017)
.++||||+++++|.+++..... ....+++.+++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 8999999999999999976421 123589999999999999999999999 7 99999999999999999999
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||.++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... ....
T Consensus 157 l~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~ 227 (279)
T 2w5a_A 157 LGDFGLARILNHDTS--------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-LAGK 227 (279)
T ss_dssp ECCCCHHHHC---CH--------HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred EecCchheeeccccc--------cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH-HHHH
Confidence 999999986543211 1122468999999999998889999999999999999999999997642210 0001
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccc
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRE 1010 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 1010 (1017)
......+ .....+++++.+++.+||+.||++||++.|+++++.....
T Consensus 228 i~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 228 IREGKFR---------------------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp HHHTCCC---------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred Hhhcccc---------------------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1000000 0011235678999999999999999999999998765543
No 226
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.3e-39 Score=371.65 Aligned_cols=263 Identities=27% Similarity=0.432 Sum_probs=206.1
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
+....++|++.++||+|+||+||+|.+.. +..||||+++.... ..+.+.+|++++++++||||+++++++..
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 250 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 250 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34456789999999999999999999974 56799999975433 34789999999999999999999999853
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 323 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 323 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred CceEEEehhhcCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECC
Confidence 34789999999999999997532 13589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++........ ......+|..|+|||++.+..++.++|||||||++|||++ |+.||......+ .....
T Consensus 324 fG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i 394 (452)
T 1fmk_A 324 FGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQV 394 (452)
T ss_dssp CCTTC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH
T ss_pred CccceecCCCcee-------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence 9999866432211 1122357889999999988899999999999999999999 999997542210 00000
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
..... ......+++.+.+++.+||+.||++|||+.++++.|+.+....
T Consensus 395 ~~~~~--------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 395 ERGYR--------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HTTCC--------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HcCCC--------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 00000 0011234677899999999999999999999999999987543
No 227
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.9e-38 Score=348.60 Aligned_cols=278 Identities=22% Similarity=0.317 Sum_probs=203.9
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++... +..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-----Cce
Confidence 579999999999999999999999999999999874432 2346788999999999999999999998765 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||++ ++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred EEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 99999997 599999986532 3688999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCC-cCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE-ASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+........ ......||+.|+|||++.+.. ++.++||||+||++|+|++|+.||......+..........
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (299)
T 2r3i_A 150 ARAFGVPVR--------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221 (299)
T ss_dssp HHHHCCCSB--------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred hhhccCCcc--------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC
Confidence 986542211 112246899999999998765 79999999999999999999999976533211111111111
Q ss_pred cCchhhhhccchhhHHHHhh-cchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 942 LPEKVIEIVDPLLLIEVMAN-NSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.+... .+........+... ...............++++.+++.+|++.||++|||+.|+++|
T Consensus 222 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 222 TPDEV-VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCCTT-TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCchh-hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11100 00000000000000 0000001111122345678999999999999999999999984
No 228
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=359.49 Aligned_cols=273 Identities=14% Similarity=0.171 Sum_probs=208.0
Q ss_pred hccccccCcccccCCceEEEEEeCC--------CcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCcee---------
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGE--------DEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIK--------- 766 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 766 (1017)
.++|++.+.||+|+||.||+|++.. +++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999987 4789999998743 45789999999999999998
Q ss_pred ------eeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceee
Q 043932 767 ------IITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHG 840 (1017)
Q Consensus 767 ------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 840 (1017)
+++++... ....++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||++ +|+||
T Consensus 116 ~~~i~~~~~~~~~~----~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~ 183 (352)
T 2jii_A 116 LLAIPTCMGFGVHQ----DKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHEN---EYVHG 183 (352)
T ss_dssp TCSCCCCCEEEEET----TTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred ccCccchhhccccC----CcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCC
Confidence 44454331 36789999999 999999998752 23789999999999999999999999 99999
Q ss_pred cCCCCceEeCCCC--CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHH
Q 043932 841 DLKPSNVLLDHDM--VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELF 918 (1017)
Q Consensus 841 Dlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 918 (1017)
||||+||+++.++ .+||+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 262 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY-VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL 262 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC-CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc-cccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999998 9999999999876543221111 111223357999999999999989999999999999999999
Q ss_pred hCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 043932 919 TGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM 998 (1017)
Q Consensus 919 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 998 (1017)
+|+.||................. ........+.. .....+++++.+++.+||+.||++||++
T Consensus 263 ~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~ 324 (352)
T 2jii_A 263 YGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPC-----------------GHWIRPSETLQKYLKVVMALTYEEKPPY 324 (352)
T ss_dssp HSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTT-----------------SCEECCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred hCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhc-----------------cccCCCcHHHHHHHHHHHhCChhhCCCH
Confidence 99999976532211111111100 00000000000 0001125678999999999999999999
Q ss_pred HHHHHHHhhccccc
Q 043932 999 RDVVAKLCHTRETF 1012 (1017)
Q Consensus 999 ~evl~~L~~~~~~~ 1012 (1017)
.|+++.|+.+.++.
T Consensus 325 ~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 325 AMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
No 229
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.5e-38 Score=370.85 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=203.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-------------chHHHHHHHHHHHHhcCCCCceeeee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-------------GAFKSFMAECKALRNIRHRNLIKIIT 769 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1017)
..++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45789999999999999999999999999999999974321 23467889999999999999999999
Q ss_pred eeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe
Q 043932 770 ICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (1017)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 849 (1017)
++... ...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 114 ~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFEDK-----KYFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEECS-----SEEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEEcC-----CEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 98754 67899999999999999987653 689999999999999999999999 99999999999999
Q ss_pred CCCC---CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 850 DHDM---VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 850 ~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
+.++ .+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||..
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 8776 69999999998664321 1223569999999999875 689999999999999999999999976
Q ss_pred ccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 927 AFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
..... ............. ......+++++.+++.+||+.||.+|||+.|+++|-
T Consensus 250 ~~~~~-~~~~i~~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 250 QNDQD-IIKKVEKGKYYFD------------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp SSHHH-HHHHHHHCCCCCC------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCHHH-HHHHHHcCCCCCC------------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 42211 1111111000000 011123456789999999999999999999998763
No 230
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.7e-38 Score=352.73 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=206.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 113 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN----- 113 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 3568999999999999999999999999999999987542 23456788999999999999999999998754
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 114 ~~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 184 (335)
T 2owb_A 114 DFVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGD 184 (335)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEee
Confidence 67899999999999999987643 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......
T Consensus 185 fg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 255 (335)
T 2owb_A 185 FGLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKK 255 (335)
T ss_dssp CTTCEECCSTT--------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHH
T ss_pred ccCceecccCc--------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhc
Confidence 99998654221 11123568999999999999889999999999999999999999997532111 0000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... . ....+++.+.+++.+||+.||++|||+.|++++
T Consensus 256 ~~~---------------------~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 256 NEY---------------------S-------IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TCC---------------------C-------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCC---------------------C-------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0 001224567899999999999999999999875
No 231
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.4e-38 Score=373.91 Aligned_cols=254 Identities=26% Similarity=0.354 Sum_probs=206.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 98 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK----- 98 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 3468999999999999999999999999999999997442 34457889999999999999999999998764
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe---CCCCCeE
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL---DHDMVSH 856 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 856 (1017)
+..++||||+.+|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 169 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIR 169 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEE
T ss_pred CEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEE
Confidence 67899999999999999997654 689999999999999999999999 99999999999999 5678999
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||....... ....
T Consensus 170 l~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~ 238 (484)
T 3nyv_A 170 IIDFGLSTHFEASK---------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKK 238 (484)
T ss_dssp ECCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred EEeeeeeEEccccc---------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence 99999998664322 1223469999999999877 68999999999999999999999997642211 1111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
......... ......+++.+.+++.+||+.||.+|||+.|+++|-
T Consensus 239 i~~~~~~~~------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 239 VEKGKYTFE------------------------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHCCCCCC------------------------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHcCCCCCC------------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 111111000 001122356789999999999999999999998764
No 232
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.3e-38 Score=344.04 Aligned_cols=252 Identities=24% Similarity=0.344 Sum_probs=207.2
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
.+.|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeE
Confidence 457999999999999999999999899999999997554 34467889999999999999999999998764 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 96 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 9999999999999998653 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhc
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+........ ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 166 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 235 (303)
T 3a7i_A 166 AGQLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNN 235 (303)
T ss_dssp CEECBTTBC--------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC
T ss_pred ceecCcccc--------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCC
Confidence 986643221 1123568999999999999899999999999999999999999997532210 000000000
Q ss_pred CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 943 PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 943 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
+. .....++..+.+++.+||+.||++|||+.|++++..
T Consensus 236 ~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 236 PP--------------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CC--------------------------CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred CC--------------------------CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 00 001123556899999999999999999999988654
No 233
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=357.93 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=205.2
Q ss_pred HHHHhhccccccCcccccCCceEEEEE-----eCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC---CCCceeeeee
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR---HRNLIKIITI 770 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~ 770 (1017)
++....++|.+.++||+|+||+||+|. +..+++.||+|++.... ..++.+|++++++++ |+||++++++
T Consensus 59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 344456789999999999999999994 56678899999986443 356777888887776 9999999999
Q ss_pred eecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC
Q 043932 771 CSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (1017)
Q Consensus 771 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 850 (1017)
+... +..++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||++ +||||||||+|||++
T Consensus 136 ~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~ 206 (365)
T 3e7e_A 136 HLFQ-----NGSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILG 206 (365)
T ss_dssp EECS-----SCEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC
T ss_pred eecC-----CCcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEec
Confidence 8765 6689999999999999999753211 123699999999999999999999999 999999999999999
Q ss_pred C-----------CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh
Q 043932 851 H-----------DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT 919 (1017)
Q Consensus 851 ~-----------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt 919 (1017)
. ++.+||+|||+|+.+.... .........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt 280 (365)
T 3e7e_A 207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFP------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280 (365)
T ss_dssp GGGTCC------CTTEEECCCTTCEEGGGSC------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH
T ss_pred ccccCccccccccCCEEEeeCchhhhhhccC------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 8 8999999999997653221 1112233579999999999999999999999999999999999
Q ss_pred CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCC-CCH
Q 043932 920 GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFER-MEM 998 (1017)
Q Consensus 920 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~ 998 (1017)
|+.||......... ........ ...+.+.+++..|++.+|.+| |++
T Consensus 281 g~~pf~~~~~~~~~------------~~~~~~~~---------------------~~~~~~~~~~~~~l~~~p~~r~~~~ 327 (365)
T 3e7e_A 281 GTYMKVKNEGGECK------------PEGLFRRL---------------------PHLDMWNEFFHVMLNIPDCHHLPSL 327 (365)
T ss_dssp SSCCCEEEETTEEE------------ECSCCTTC---------------------SSHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred CCCccccCCCCcee------------echhcccc---------------------CcHHHHHHHHHHHcCCCCCCcchHH
Confidence 99999654322110 00000000 013456788899999999998 578
Q ss_pred HHHHHHHhhcccccc
Q 043932 999 RDVVAKLCHTRETFF 1013 (1017)
Q Consensus 999 ~evl~~L~~~~~~~~ 1013 (1017)
.++.+.|++..+...
T Consensus 328 ~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 328 DLLRQKLKKVFQQHY 342 (365)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888888765543
No 234
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.7e-39 Score=368.69 Aligned_cols=253 Identities=15% Similarity=0.171 Sum_probs=191.9
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHH---HHHhcCCCCceeee-------e
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECK---ALRNIRHRNLIKII-------T 769 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~ 769 (1017)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+.+.+|+. .+++++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 357899999999999999999999889999999999743 3345578889994 55555899999998 4
Q ss_pred eeecCCC---------CCC---ceeEEEEEeccCCCHHHHHhhCCCCc-cccccCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 043932 770 ICSSIDS---------KGA---DFKALVFECMKNGSLEDWLHQSNDHL-EVCKLTLIQRVNIAIDVASAIEYLHHHCQPP 836 (1017)
Q Consensus 770 ~~~~~~~---------~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 836 (1017)
++..... .+. ...|+||||+ +|+|.+++....... ....+++..++.|+.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4433211 000 0378999999 579999998643111 123455688899999999999999999 9
Q ss_pred ceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-----------CcCccc
Q 043932 837 MVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-----------EASMTG 905 (1017)
Q Consensus 837 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~ 905 (1017)
|+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 99999999999999999999999999985322 1123467 999999999887 799999
Q ss_pred cchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHh
Q 043932 906 DVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGV 985 (1017)
Q Consensus 906 DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 985 (1017)
|||||||++|||++|+.||......... .. +.. ....+++++.+++.
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~~----------~~---~~~--------------------~~~~~~~~~~~li~ 341 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGGS----------EW---IFR--------------------SCKNIPQPVRALLE 341 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CCS----------GG---GGS--------------------SCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccch----------hh---hhh--------------------hccCCCHHHHHHHH
Confidence 9999999999999999999754322110 00 000 00122567889999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 043932 986 LCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 986 ~cl~~dP~~RPs~~evl~~ 1004 (1017)
+||+.||++|||+.|++++
T Consensus 342 ~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTS
T ss_pred HHcCCCchhCCCHHHHhhC
Confidence 9999999999999999874
No 235
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=346.12 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=200.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+.+|+.++++++||||+++++++... +..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN-----TDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEE
Confidence 4568999999999999999999999999999999997543 346789999999999999999999998764 678
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 99999999999999997433 2689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhc
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIAL 942 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 942 (1017)
+....... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ . .......
T Consensus 172 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~-~~~~~~~ 241 (314)
T 3com_A 172 AGQLTDTM--------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA-I-FMIPTNP 241 (314)
T ss_dssp CEECBTTB--------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-H-HHHHHSC
T ss_pred chhhhhhc--------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH-H-HHHhcCC
Confidence 97654321 111235689999999999998999999999999999999999999975322100 0 0000000
Q ss_pred CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 943 PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 943 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
+.. . .....++..+.+++.+||+.||.+|||+.|++++
T Consensus 242 ~~~--------~----------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 242 PPT--------F----------------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCC--------C----------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred Ccc--------c----------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000 0 0011225678899999999999999999999875
No 236
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.1e-38 Score=362.47 Aligned_cols=201 Identities=24% Similarity=0.339 Sum_probs=173.4
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc------CCCCceeeeeeeecCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI------RHRNLIKIITICSSIDS 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~ 776 (1017)
...+|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|+++++.+ .|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~-- 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR-- 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET--
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC--
Confidence 346799999999999999999999999999999999743 23345677888888877 577999999998765
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC--
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV-- 854 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-- 854 (1017)
+..++||||++ ++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 172 ---~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~ 240 (429)
T 3kvw_A 172 ---NHICMTFELLS-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240 (429)
T ss_dssp ---TEEEEEECCCC-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCC
T ss_pred ---CeEEEEEeccC-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcc
Confidence 67899999996 599999987542 3589999999999999999999999 9999999999999999987
Q ss_pred eEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 855 SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|++||....
T Consensus 241 vkL~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQR-----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eEEeecccceecCCc-----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999999999754321 123578999999999999999999999999999999999999997653
No 237
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4e-38 Score=350.52 Aligned_cols=267 Identities=22% Similarity=0.384 Sum_probs=204.5
Q ss_pred hhccccccCcccccCCceEEEEE-----eCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGI-----LGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDS 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1017)
..++|++.+.||+|+||.||+|+ ...+++.||||++.... .....++.+|+.++++++||||+++++++...
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 105 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS-- 105 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC--
Confidence 35689999999999999999999 44567889999996432 33456788999999999999999999998654
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCC-ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC---C
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDH-LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---D 852 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~ 852 (1017)
...++||||+++++|.+++...... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++. +
T Consensus 106 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~ 179 (327)
T 2yfx_A 106 ---LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG 179 (327)
T ss_dssp ---SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred ---CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCc
Confidence 5679999999999999999876421 1224589999999999999999999999 9999999999999984 4
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccC
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEG 931 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~ 931 (1017)
..+||+|||++......... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 180 ~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 252 (327)
T 2yfx_A 180 RVAKIGDFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ- 252 (327)
T ss_dssp CCEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred ceEEECcccccccccccccc------ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-
Confidence 56999999999765432211 11123467899999999988889999999999999999998 99998753221
Q ss_pred ccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 932 LTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
............ .....+++.+.+++.+||+.||.+||++.|++++|+.+.+.
T Consensus 253 -~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 253 -EVLEFVTSGGRM--------------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -HHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -HHHHHHhcCCCC--------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 011111000000 00112356789999999999999999999999999987654
No 238
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-38 Score=350.53 Aligned_cols=262 Identities=25% Similarity=0.405 Sum_probs=205.8
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEE--EEEEeeec-CcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCc
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIV--AVKVINLK-QKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1017)
++|++.+.||+|+||.||+|++..++..+ |+|.+... .....+.+.+|+++++++ +||||+++++++... +
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----G 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-----T
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC-----C
Confidence 57999999999999999999998888755 99988743 233456789999999999 899999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCC----------ccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD 850 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 850 (1017)
..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 789999999999999999865310 1123689999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccc
Q 043932 851 HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFT 929 (1017)
Q Consensus 851 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~ 929 (1017)
.++.+||+|||+++...... ......+++.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC---------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred CCCeEEEcccCcCccccccc---------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH
Confidence 99999999999987432111 1112357889999999988889999999999999999998 9999975422
Q ss_pred cCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcc
Q 043932 930 EGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTR 1009 (1017)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 1009 (1017)
. +...... .. ... .....+++.+.+++.+||+.||.+|||+.|++++|+.+.
T Consensus 248 ~-----~~~~~~~-~~----~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 248 A-----ELYEKLP-QG----YRL------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp H-----HHHHHGG-GT----CCC------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H-----HHHHHhh-cC----CCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1111000 00 000 001123567899999999999999999999999999876
Q ss_pred cc
Q 043932 1010 ET 1011 (1017)
Q Consensus 1010 ~~ 1011 (1017)
+.
T Consensus 300 ~~ 301 (327)
T 1fvr_A 300 EE 301 (327)
T ss_dssp HS
T ss_pred Hh
Confidence 54
No 239
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.8e-38 Score=340.33 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=197.0
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC---cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ---KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... +
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-----T 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 468999999999999999999999899999999997432 23456788999999999999999999998654 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 7899999999999999997653 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|.+........ .....||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||....... ......
T Consensus 156 g~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~ 224 (276)
T 2h6d_A 156 GLSNMMSDGEF---------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIR 224 (276)
T ss_dssp CGGGCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred ccccccCCCcc---------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhh
Confidence 99986543221 122468999999999988765 689999999999999999999997532110 000000
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.... .....++..+.+++.+|++.||++|||+.|++++
T Consensus 225 ~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 225 GGVF---------------------------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HCCC---------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCcc---------------------------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 0001124568899999999999999999999986
No 240
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.2e-38 Score=355.44 Aligned_cols=278 Identities=19% Similarity=0.253 Sum_probs=204.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC-CC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK-GA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 779 (1017)
..++|.+.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++...... ..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 34689999999999999999999999999999999975432 3357788999999999999999999998665321 12
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
...++||||++ ++|.+++.. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECS
T ss_pred eeEEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEe
Confidence 23489999997 589888742 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
||+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. .....
T Consensus 188 fg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~ 255 (371)
T 4exu_A 188 FGLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQIL 255 (371)
T ss_dssp TTCC-------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred cCcccccccC-----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence 9999754321 123568999999999877 6789999999999999999999999976432211 11111
Q ss_pred Hhh-cC-chhhhhccchhhHHHHhhc-chhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 939 KIA-LP-EKVIEIVDPLLLIEVMANN-SMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 939 ~~~-~~-~~~~~~~d~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
... .+ ......+.......+.... .............+++.+.+++.+||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 111 11 1111111111111111000 000011111223346789999999999999999999999987
No 241
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=355.84 Aligned_cols=258 Identities=22% Similarity=0.305 Sum_probs=203.4
Q ss_pred hccccccCcccccCCceEEEEEeC---CCcEEEEEEEeeecC----cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILG---EDEMIVAVKVINLKQ----KGAFKSFMAECKALRNI-RHRNLIKIITICSSID 775 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1017)
.++|++.++||+|+||+||+|++. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 468999999999999999999984 478999999986432 23345677899999999 699999999998665
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCe
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
+..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 132 ----~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 132 ----TKLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp ----TEEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred ----ceEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 67899999999999999998653 689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccC--CCcCccccchhHHHHHHHHHhCCCCCCcccccCcc
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG--SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT 933 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~ 933 (1017)
||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 199 kl~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~- 270 (355)
T 1vzo_A 199 VLTDFGLSKEFVADET-------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS- 270 (355)
T ss_dssp EESCSSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-
T ss_pred EEeeCCCCeecccCCC-------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-
Confidence 9999999986543221 11223579999999999986 3478999999999999999999999975432221
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHHhh
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERM-----EMRDVVAKLCH 1007 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~ 1007 (1017)
...+....... . .....+++..+.+++.+||+.||.+|| ++.|++++..-
T Consensus 271 ~~~~~~~~~~~------~------------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 271 QAEISRRILKS------E------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp HHHHHHHHHHC------C------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred HHHHHHHHhcc------C------------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 11111110000 0 001112355688999999999999999 99999987644
No 242
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.5e-38 Score=353.60 Aligned_cols=290 Identities=21% Similarity=0.293 Sum_probs=198.4
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS- 776 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 776 (1017)
.+.....++|++.+.||+|+||+||+|++..+++.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677889999999999999999999999999999999986443 333567788888999999999999999866433
Q ss_pred -CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHh--hCCCCCceeecCCCCceEeCC-C
Q 043932 777 -KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--HHCQPPMVHGDLKPSNVLLDH-D 852 (1017)
Q Consensus 777 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~ 852 (1017)
....+.++||||+++ +|.+.+..... ....+++..+..++.|++.||+||| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 223457899999976 65554442110 1236889999999999999999999 87 9999999999999997 8
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCC-cCccccchhHHHHHHHHHhCCCCCCcccccC
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE-ASMTGDVYSFGILLLELFTGRRPTDAAFTEG 931 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~pf~~~~~~~ 931 (1017)
+.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 169 ~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 239 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG 239 (360)
T ss_dssp TEEEECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CcEEEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH
Confidence 999999999998664322 112356899999999986654 8999999999999999999999997643221
Q ss_pred ccHHHHHHhh-cCc-hhhhhccchhh-HHHH-hhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 932 LTLHEFAKIA-LPE-KVIEIVDPLLL-IEVM-ANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 932 ~~~~~~~~~~-~~~-~~~~~~d~~l~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......... .+. ......++... .... .....+..........+++++.+++.+||+.||.+|||+.|+++|
T Consensus 240 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 240 -QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp -HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 122222111 111 11111111000 0000 000001111111122246789999999999999999999999986
No 243
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4e-38 Score=344.06 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=200.7
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1017)
..++|++.+.||+|+||+||+|++..+++.||+|++.... .....++.+|+..+.++ +||||+++++++...
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 4578999999999999999999999999999999997542 33456788999999999 999999999998765
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC-------
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD------- 852 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------- 852 (1017)
+..++||||+++++|.+++..... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred CeEEEEEEecCCCcHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 678999999999999999976421 113689999999999999999999999 99999999999999844
Q ss_pred ------------CCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHh
Q 043932 853 ------------MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFT 919 (1017)
Q Consensus 853 ------------~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ellt 919 (1017)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||+||++|||++
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ------------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 226 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC------------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCCceEEEEcccccccccCCcc------------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc
Confidence 479999999998654321 13589999999999775 56789999999999999999
Q ss_pred CCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 043932 920 GRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMR 999 (1017)
Q Consensus 920 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 999 (1017)
|.+|+.... ..........+. ....+++.+.+++.+||+.||++|||+.
T Consensus 227 ~~~~~~~~~----~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 275 (289)
T 1x8b_A 227 AEPLPRNGD----QWHEIRQGRLPR---------------------------IPQVLSQEFTELLKVMIHPDPERRPSAM 275 (289)
T ss_dssp CCCCCSSSH----HHHHHHTTCCCC---------------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCcchh----HHHHHHcCCCCC---------------------------CCcccCHHHHHHHHHHhCCCcccCCCHH
Confidence 998764321 111111111100 0112356789999999999999999999
Q ss_pred HHHHHH
Q 043932 1000 DVVAKL 1005 (1017)
Q Consensus 1000 evl~~L 1005 (1017)
|++++-
T Consensus 276 ~ll~h~ 281 (289)
T 1x8b_A 276 ALVKHS 281 (289)
T ss_dssp HHHTCT
T ss_pred HHhhCh
Confidence 998764
No 244
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.8e-38 Score=343.07 Aligned_cols=254 Identities=24% Similarity=0.311 Sum_probs=204.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---------chHHHHHHHHHHHHhcC-CCCceeeeeeee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---------GAFKSFMAECKALRNIR-HRNLIKIITICS 772 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 772 (1017)
..++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 45789999999999999999999999999999999975431 22456789999999995 999999999986
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD 852 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 852 (1017)
.. ...++||||+++++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 95 ~~-----~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 TN-----TFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp CS-----SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred cC-----CeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 54 67899999999999999998643 689999999999999999999999 99999999999999999
Q ss_pred CCeEEeecccccccccccccccccCCCcccccccCccccCccccc------CCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 853 MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM------GSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 853 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
+.+||+|||.+....... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||..
T Consensus 161 ~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 999999999998654322 112346899999999885 44688999999999999999999999965
Q ss_pred ccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 927 AFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..... ............ . ......+++.+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~-~~~~~~~~~~~~-----~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 232 RKQML-MLRMIMSGNYQF-----G-------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp SSHHH-HHHHHHHTCCCC-----C-------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ccHHH-HHHHHhcCCccc-----C-------------------cccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 32210 011111100000 0 00112335678999999999999999999999875
No 245
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.8e-38 Score=340.66 Aligned_cols=256 Identities=30% Similarity=0.382 Sum_probs=201.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCcee
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
..++|++.+.||+|+||+||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++... .+..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~ 90 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGL 90 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CCce
Confidence 3578999999999999999999984 7899999986432 457789999999999999999999987543 2467
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGL 862 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 862 (1017)
++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 163 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 163 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEecCCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccc
Confidence 99999999999999997642 12478999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhh
Q 043932 863 AKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 863 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+....... ....+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ........
T Consensus 164 ~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~ 230 (278)
T 1byg_A 164 TKEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG 230 (278)
T ss_dssp -----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTT
T ss_pred cccccccc-----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhcC
Confidence 87543211 11357889999999988889999999999999999998 999997642211 11100000
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.. ......+++.+.+++.+||+.||++|||+.|+++.|+.++...
T Consensus 231 ~~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 231 YK--------------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CC--------------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 0001123567899999999999999999999999999987654
No 246
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.3e-38 Score=359.60 Aligned_cols=281 Identities=22% Similarity=0.283 Sum_probs=200.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 782 (1017)
..+|++.++||+|+||+||+|++..+++.||||++..... ...+|++++++++||||+++++++..... .+..+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 4579999999999999999999998999999999864332 23479999999999999999998855322 233457
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC-CCeEEeecc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD-MVSHVGDFG 861 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG 861 (1017)
++||||+++ ++.+.+..... ....+++..++.++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred Eeehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 799999976 67766653210 123789999999999999999999999 99999999999999965 578999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
+++...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+.+..+.
T Consensus 203 ~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~ 272 (420)
T 1j1b_A 203 SAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKV 272 (420)
T ss_dssp TCEECCTTC---------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred hhhhcccCC---------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 998654322 11235789999999998764 78999999999999999999999998643221 22222221
Q ss_pred hcCchhhhh--ccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 941 ALPEKVIEI--VDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 941 ~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
........+ ..+........ ...............++++.+++.+||+.||++|||+.|+++|-
T Consensus 273 lg~p~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 273 LGTPTREQIREMNPNYTEFKFP-QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HCSCCHHHHHHHCSCCCCCCCC-CCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hCCCCHHHHHhhChhhhhhccC-ccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 111100000 00000000000 00000000001122356789999999999999999999998763
No 247
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2e-37 Score=347.14 Aligned_cols=281 Identities=20% Similarity=0.290 Sum_probs=207.6
Q ss_pred hccccccCcccccCCceEEEEEe-CCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCC------ceeeeeeeecCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGIL-GEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRN------LIKIITICSSIDS 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1017)
.++|++.+.||+|+||+||+|.+ ..+++.||||++... ....+.+.+|+++++.++|++ ++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-- 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-- 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET--
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC--
Confidence 46899999999999999999998 568899999998643 234467889999999887654 99999998765
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC-----
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH----- 851 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 851 (1017)
+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 90 ---~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 90 ---GHICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred ---CcEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 6789999999 8899999987542 3688999999999999999999999 9999999999999987
Q ss_pred --------------CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHH
Q 043932 852 --------------DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLEL 917 (1017)
Q Consensus 852 --------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 917 (1017)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccCCccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 678999999999754321 1224689999999999998999999999999999999
Q ss_pred HhCCCCCCcccccCccHHHHHHh--hcCchhhhhccch--------------hhHHHHhhcchhHHHhHHhHHHHHHHHH
Q 043932 918 FTGRRPTDAAFTEGLTLHEFAKI--ALPEKVIEIVDPL--------------LLIEVMANNSMIQEDIRAKTQECLNAII 981 (1017)
Q Consensus 918 ltg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~--------------l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 981 (1017)
++|+.||....... ........ ..+..+....... ......................+++++.
T Consensus 228 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (339)
T 1z57_A 228 YLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306 (339)
T ss_dssp HHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHH
Confidence 99999997643221 11111111 1111111100000 0000000000000000011234577899
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH--Hhhccc
Q 043932 982 RIGVLCSMESPFERMEMRDVVAK--LCHTRE 1010 (1017)
Q Consensus 982 ~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 1010 (1017)
+++.+||+.||.+|||+.|++++ ++.+++
T Consensus 307 ~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 307 DLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred HHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 99999999999999999999976 444443
No 248
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=376.65 Aligned_cols=261 Identities=21% Similarity=0.356 Sum_probs=204.1
Q ss_pred ccccccC-cccccCCceEEEEEeC--CCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 705 SEFASSN-MIGQGSFGSVYKGILG--EDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 705 ~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
+++.+.+ .||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||++++++|.. +
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~ 408 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 408 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------S
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------C
Confidence 3444444 7999999999999875 456789999997543 3456789999999999999999999999854 3
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++|+|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DF 480 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDF 480 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred CeEEEEEeCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeec
Confidence 4799999999999999997654 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++......... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ......
T Consensus 481 Gla~~~~~~~~~~-----~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~ 553 (613)
T 2ozo_A 481 GLSKALGADDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIE 553 (613)
T ss_dssp STTTTCC-------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHH
T ss_pred cCcccccCCCcee-----eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHH
Confidence 9998764322111 11112346789999999998899999999999999999998 999997643211 111111
Q ss_pred hhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 940 IALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 940 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
.... ......+++++.+++.+||+.||++||++.+|++.|+.+..+.
T Consensus 554 ~~~~--------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 554 QGKR--------------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp TTCC--------------------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred cCCC--------------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0000 0011234678999999999999999999999999999876554
No 249
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=343.08 Aligned_cols=257 Identities=21% Similarity=0.335 Sum_probs=201.6
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC----cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---E 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---C
Confidence 3578999999999999999999999999999999997432 23457889999999999999999999998533 2
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
....++||||++++ +.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~ 151 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKIS 151 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred CCeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEee
Confidence 25689999999876 8787776432 3689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCC--cCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSE--ASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|||.+......... .......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||...... .
T Consensus 152 dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~ 220 (305)
T 2wtk_C 152 ALGVAEALHPFAAD------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-----K 220 (305)
T ss_dssp CCTTCEECCTTCSS------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----H
T ss_pred ccccccccCccccc------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-----H
Confidence 99999865432211 1112346899999999987643 478999999999999999999999753211 1
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
........ .. .....+++.+.+++.+||+.||.+|||+.|++++-
T Consensus 221 ~~~~i~~~-----------------~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 221 LFENIGKG-----------------SY-------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp HHHHHHHC-----------------CC-------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred HHHHHhcC-----------------CC-------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11000000 00 00112356788999999999999999999999863
No 250
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-37 Score=377.61 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=205.1
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec---CcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCC
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK---QKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1017)
..++|++.++||+|+||+||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~---- 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 414 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC----
Confidence 356899999999999999999999999999999999743 234456788899999988 799999999988654
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 415 -~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 415 -DRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred -CEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 67899999999999999998654 689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +..
T Consensus 485 DFGla~~~~~~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~~ 551 (674)
T 3pfq_A 485 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELF 551 (674)
T ss_dssp CCTTCEECCCTT--------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred ecceeeccccCC--------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HHH
Confidence 999998543211 1123467999999999999999999999999999999999999999764221 111
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM-----RDVVAK 1004 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 1004 (1017)
....... .. .....++++.+++.+||+.||++||++ +||++|
T Consensus 552 ~~i~~~~-----------------~~-------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 552 QSIMEHN-----------------VA-------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHSSC-----------------CC-------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHhCC-----------------CC-------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1100000 00 001235678999999999999999997 777654
No 251
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.8e-38 Score=349.43 Aligned_cols=273 Identities=23% Similarity=0.310 Sum_probs=187.2
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
...++|++.+.||+|+||.||+|++..+++.||||++.... ....+++.+|+.++++++||||+++++++... +
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-----D 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS-----S
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec-----C
Confidence 34578999999999999999999998889999999986443 23456788999999999999999999998765 5
Q ss_pred eeEEEEEeccCCCHHHHHhhCCC--CccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 781 FKALVFECMKNGSLEDWLHQSND--HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
..++||||+++++|.+++..... ......+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 68999999999999999874210 01123689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
|||.+.......... .........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ..
T Consensus 164 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~ 239 (303)
T 2vwi_A 164 DFGVSAFLATGGDIT---RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LT 239 (303)
T ss_dssp CCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HH
T ss_pred eccchheeccCCCcc---chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HH
Confidence 999997664322110 1111223568999999999866 468999999999999999999999997643221111 00
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. ..+........ .......+++.+.+++.+||+.||.+|||+.|++++
T Consensus 240 ~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 240 LQ-NDPPSLETGVQ-----------------DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HT-SSCCCTTC----------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hc-cCCCccccccc-----------------cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 00000000000 000111235678899999999999999999999975
No 252
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.1e-38 Score=358.68 Aligned_cols=279 Identities=21% Similarity=0.267 Sum_probs=197.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGADFK 782 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 782 (1017)
..+|++.++||+|+||+||+|++..+++ ||+|++...... ..+|+++++.++||||+++++++..... .+..+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 4579999999999999999999986666 888877543221 2369999999999999999999866533 334567
Q ss_pred EEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC-CCCCeEEeecc
Q 043932 783 ALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-HDMVSHVGDFG 861 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG 861 (1017)
++||||++++ +.+.+..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 114 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 114 NLVLEYVPET-VYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEECCSEE-HHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEeeccCcc-HHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 8999999874 4443332110 113789999999999999999999999 999999999999999 79999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
+|+...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+ .+....+.
T Consensus 188 ~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~ 257 (394)
T 4e7w_A 188 SAKILIAGE---------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKV 257 (394)
T ss_dssp TCEECCTTC---------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred CcccccCCC---------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 998664322 11235689999999998765 58999999999999999999999998753221 12222221
Q ss_pred hcCchh--hhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 941 ALPEKV--IEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 941 ~~~~~~--~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
...... .....+......... ....+........+++++.+++.+||+.||.+|||+.|+++|
T Consensus 258 ~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 258 LGTPSREQIKTMNPNYMEHKFPQ-IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCCCCHHHHHHHCGGGSSSCCCC-CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hCCCCHHHHHhhChhhhhhcccc-ccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 111110 000000000000000 000000001112245688999999999999999999999987
No 253
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.7e-38 Score=342.10 Aligned_cols=257 Identities=22% Similarity=0.252 Sum_probs=188.5
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.++...++.++||||+++++++... +
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~-----~ 79 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----G 79 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc-----C
Confidence 35789999999999999999999999999999999975432 2223344555567888999999999998754 5
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||+++ +|.+++..... ....+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 80 DVWICMELMDT-SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp SEEEEEECCSE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred CEEEEEehhcc-chHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeec
Confidence 68999999975 88888764211 1237899999999999999999999842 8999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccc----cCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYC----MGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+++....... .....||+.|+|||++ .+..++.++||||+||++|||++|+.||............
T Consensus 155 g~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 225 (290)
T 3fme_A 155 GISGYLVDDVA---------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225 (290)
T ss_dssp ------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred CCccccccccc---------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH
Confidence 99986543221 1123689999999996 4567899999999999999999999999753222111111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......+.. ....+++++.+++.+||+.||++|||+.|+++|
T Consensus 226 ~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 226 VVEEPSPQL--------------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHSCCCCC--------------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhccCCCCc--------------------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 111111100 001235678999999999999999999999875
No 254
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1e-37 Score=341.24 Aligned_cols=264 Identities=27% Similarity=0.381 Sum_probs=198.3
Q ss_pred hccccccCcccccCCceEEEEEeCC-C--cEEEEEEEeeec---CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGE-D--EMIVAVKVINLK---QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.++|++.+.||+|+||+||+|++.. + +..||+|+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 4689999999999999999998632 2 346999998744 234567889999999999999999999998643
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred ---CceeeEecccCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 2689999999999999998643 2689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHH
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~ 936 (1017)
+|||++........... ......+|..|+|||++.+..++.++||||+|+++|||++ |+.||....... ....
T Consensus 163 ~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~ 236 (291)
T 1u46_A 163 GDFGLMRALPQNDDHYV-----MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHK 236 (291)
T ss_dssp CCCTTCEECCC-CCEEE-----C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHH
T ss_pred ccccccccccccccchh-----hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHH
Confidence 99999987643321111 1122457889999999988889999999999999999999 999997642210 0000
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccccc
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETFF 1013 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1013 (1017)
........ .....+++.+.+++.+||+.||++|||+.|++++|+++...-.
T Consensus 237 ~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 237 IDKEGERL--------------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp HHTSCCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred HHccCCCC--------------------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 00000000 0011235678999999999999999999999999999876543
No 255
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.3e-38 Score=377.53 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=200.9
Q ss_pred CcccccCCceEEEEEe--CCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCceeEEEE
Q 043932 711 NMIGQGSFGSVYKGIL--GEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADFKALVF 786 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 786 (1017)
++||+|+||+||+|.+ ..+++.||||+++... ....+++.+|++++++++||||+++++++.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999955 4567899999997543 2345789999999999999999999999853 3478999
Q ss_pred EeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccccccc
Q 043932 787 ECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFL 866 (1017)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 866 (1017)
||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999997653 689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHHHHhhcCch
Q 043932 867 SSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEFAKIALPEK 945 (1017)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 945 (1017)
....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..........
T Consensus 520 ~~~~~~~-----~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~-- 590 (635)
T 4fl3_A 520 RADENYY-----KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGER-- 590 (635)
T ss_dssp TC------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC--
T ss_pred ccCcccc-----ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--
Confidence 5332111 11122357889999999998899999999999999999998 999997642211 1111110000
Q ss_pred hhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 946 VIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 946 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
......+++++.+++.+||+.||++||++.+|++.|+++..+.
T Consensus 591 ------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 ------------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp ------------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0011234677899999999999999999999999999876654
No 256
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-37 Score=342.81 Aligned_cols=267 Identities=23% Similarity=0.332 Sum_probs=198.2
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC------
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS------ 776 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 776 (1017)
..++|++.+.||+|+||.||+|++..+++.||+|++... ....+.+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457899999999999999999999989999999999643 3345778899999999999999999998865321
Q ss_pred --CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 777 --KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 777 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
......++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 23467899999999999999998654 3678899999999999999999999 9999999999999999999
Q ss_pred eEEeeccccccccccccccc------ccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 043932 855 SHVGDFGLAKFLSSHQLDTA------SKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAA 927 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~ 927 (1017)
+||+|||.+........... ...........||+.|+|||++.+. .++.++||||+||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 99999999986543210000 0001122335689999999999764 68999999999999999998 55432
Q ss_pred cccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 928 FTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
............... .. . ......+++.+.+++.+||+.||.+|||+.|++++-
T Consensus 232 ~~~~~~~~~~~~~~~--~~----~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 232 MERVNILKKLRSVSI--EF----P------------------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp HHHHHHHHHHHSTTC--CC----C------------------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred hhHHHHHHhcccccc--cc----C------------------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 111111111000000 00 0 001112355688999999999999999999999863
No 257
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-37 Score=346.99 Aligned_cols=283 Identities=21% Similarity=0.325 Sum_probs=207.2
Q ss_pred HhhccccccCcccccCCceEEEEEeC-CCcEEEEEEEeeecCc--chHHHHHHHHHHHHhc---CCCCceeeeeeeecCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILG-EDEMIVAVKVINLKQK--GAFKSFMAECKALRNI---RHRNLIKIITICSSID 775 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 775 (1017)
...++|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999995 6789999999875432 2234566777777766 8999999999986433
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCe
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVS 855 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 855 (1017)
.......++||||++ |+|.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~ 159 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 159 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCE
Confidence 334477899999997 599999987542 2589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHH
Q 043932 856 HVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLH 935 (1017)
Q Consensus 856 kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~ 935 (1017)
||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 160 kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~ 229 (326)
T 1blx_A 160 KLADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLG 229 (326)
T ss_dssp EECSCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred EEecCcccccccCCC---------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHH
Confidence 999999997654221 1123568999999999998899999999999999999999999997643221 111
Q ss_pred HHHHhhcCchhhhhccch-hhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPL-LLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.............+.... ...... ..............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVALPRQAF--HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGS--CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcCCCCcccCccccccchhhh--cccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111111100000000000 000000 0000000111122346678999999999999999999999975
No 258
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=373.97 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=211.1
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCC
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1017)
++....++|++.++||+|+||+||+|++.. +..||||+++.... ..+.+.+|++++++++||||+++++++..
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 333 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE----- 333 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-----
Confidence 344456789999999999999999999974 56799999975443 34789999999999999999999999853
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 334 -~~~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 405 (535)
T 2h8h_A 334 -EPIYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 405 (535)
T ss_dssp -SSCEEEECCCTTEEHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred -ccceEeeehhcCCcHHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEc
Confidence 34789999999999999997532 13589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCccHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~~~~~~ 937 (1017)
|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ....
T Consensus 406 DFG~a~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~ 476 (535)
T 2h8h_A 406 DFGLARLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQ 476 (535)
T ss_dssp CTTSTTTCCCHHHHT-------TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHH
T ss_pred ccccceecCCCceec-------ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence 999998664322111 112356889999999988899999999999999999999 999997542210 0000
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
...... ......+++.+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 477 i~~~~~--------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 477 VERGYR--------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHTTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHcCCC--------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 000000 0011234667899999999999999999999999999987643
No 259
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=358.40 Aligned_cols=289 Identities=19% Similarity=0.224 Sum_probs=189.8
Q ss_pred hccccc-cCcccccCCceEEEEEeC--CCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFAS-SNMIGQGSFGSVYKGILG--EDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.+.|.+ +++||+|+||+||+|++. .+++.||||++..... .+.+.+|++++++++||||+++++++.... ..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHA---DR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETT---TT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCC---CC
Confidence 345666 568999999999999976 4678899999864432 357889999999999999999999985432 26
Q ss_pred eeEEEEEeccCCCHHHHHhhCCC---CccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe----CCCC
Q 043932 781 FKALVFECMKNGSLEDWLHQSND---HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL----DHDM 853 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~ 853 (1017)
..++||||+++ +|.+++..... ......+++..++.++.||+.||+|||++ +|+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 78999999965 88888764321 11123589999999999999999999999 99999999999999 6778
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCccccchhHHHHHHHHHhCCCCCCcccccC-
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASMTGDVYSFGILLLELFTGRRPTDAAFTEG- 931 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~pf~~~~~~~- 931 (1017)
.+||+|||+|+....... .........||+.|+|||++.+. .++.++||||+||++|||++|++||.......
T Consensus 170 ~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 244 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244 (405)
T ss_dssp CEEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC----
T ss_pred cEEEEECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccc
Confidence 999999999987643211 11122335799999999999874 58999999999999999999999997643221
Q ss_pred -------ccHHHHHHhhc-Cc--hhhhhccchhhHHHHhhcch-------hHHHhHHhHHHHHHHHHHHHhhccCCCCCC
Q 043932 932 -------LTLHEFAKIAL-PE--KVIEIVDPLLLIEVMANNSM-------IQEDIRAKTQECLNAIIRIGVLCSMESPFE 994 (1017)
Q Consensus 932 -------~~~~~~~~~~~-~~--~~~~~~d~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 994 (1017)
..+........ +. .+..+..-............ .............+.+.+++.+||+.||.+
T Consensus 245 ~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~ 324 (405)
T 3rgf_A 245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 324 (405)
T ss_dssp --CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGG
T ss_pred ccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCccc
Confidence 11111111111 10 01000000000000000000 000000000112456889999999999999
Q ss_pred CCCHHHHHHHHh
Q 043932 995 RMEMRDVVAKLC 1006 (1017)
Q Consensus 995 RPs~~evl~~L~ 1006 (1017)
|||+.|+++|-.
T Consensus 325 R~ta~e~L~hp~ 336 (405)
T 3rgf_A 325 RITSEQAMQDPY 336 (405)
T ss_dssp SCCHHHHHTSGG
T ss_pred CCCHHHHhcChh
Confidence 999999998754
No 260
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.2e-38 Score=357.49 Aligned_cols=261 Identities=10% Similarity=0.025 Sum_probs=184.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHHHHhc--CCCCceeee-------eee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKALRNI--RHRNLIKII-------TIC 771 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~ 771 (1017)
..+|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4569999999999999999999999999999999986543 3345677785555444 699988855 333
Q ss_pred ecCCCC------------CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHH------HHHHHHHHHHHHHHhhCC
Q 043932 772 SSIDSK------------GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQR------VNIAIDVASAIEYLHHHC 833 (1017)
Q Consensus 772 ~~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~ 833 (1017)
...... .....|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 221110 0145799999998 799999986432 3344445 67889999999999999
Q ss_pred CCCceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccC--CCcCccccchhHH
Q 043932 834 QPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG--SEASMTGDVYSFG 911 (1017)
Q Consensus 834 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG 911 (1017)
+|+||||||+|||++.++.+||+|||+|+...... ....||+.|+|||++.+ ..++.++||||||
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----------PASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----------cCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 99999999999999999999999999998653211 12457799999999987 6799999999999
Q ss_pred HHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCC
Q 043932 912 ILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMES 991 (1017)
Q Consensus 912 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 991 (1017)
|++|||++|+.||.......... +.... ......... . ......+++.+.+++.+||+.|
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~~--~~~~~----~~~~~~~~~---------~-----~~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKGS--WKRPS----LRVPGTDSL---------A-----FGSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTTC--CCBCC----TTSCCCCSC---------C-----CTTSSCCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHhCCCCCCCcCcccccc--hhhhh----hhhcccccc---------c-----hhhccCCCHHHHHHHHHHcCCC
Confidence 99999999999998753321100 00000 000000000 0 0001123567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 043932 992 PFERMEMRDVVAK 1004 (1017)
Q Consensus 992 P~~RPs~~evl~~ 1004 (1017)
|++|||+.|+++|
T Consensus 341 P~~Rpt~~e~l~h 353 (371)
T 3q60_A 341 RRRRLLPLEAMET 353 (371)
T ss_dssp TTTCCCHHHHTTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999764
No 261
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.2e-37 Score=346.61 Aligned_cols=258 Identities=22% Similarity=0.271 Sum_probs=199.1
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHHH-HHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECKA-LRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.+.||+|+||+||+|++..+++.||||++..... ....++..|..+ ++.++||||+++++++...
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~----- 122 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE----- 122 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-----
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-----
Confidence 345689999999999999999999999999999999975432 233455566655 6778999999999998764
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEee
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGD 859 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 859 (1017)
+..++||||+++ +|.+++..... ....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECC
T ss_pred CcEEEEHHHhhC-cHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEee
Confidence 568999999976 99998874211 1237899999999999999999999732 899999999999999999999999
Q ss_pred cccccccccccccccccCCCcccccccCccccCcccccC----CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHH
Q 043932 860 FGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG----SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLH 935 (1017)
Q Consensus 860 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~ 935 (1017)
||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 198 fg~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~ 268 (340)
T 3an0_A 198 FGISGYLVDSVA---------KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 268 (340)
T ss_dssp CSHHHHHSCHHH---------HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred CCCceecccccc---------cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH
Confidence 999986643211 112368999999999643 4689999999999999999999999975322111111
Q ss_pred HHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 936 EFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 936 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.......+. . ....+++++.+++.+||+.||++|||+.|++++
T Consensus 269 ~~~~~~~~~---------~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 269 QVVEEPSPQ---------L-----------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHHSCCCC---------C-----------------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhcCCCCC---------C-----------------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111110000 0 001235678999999999999999999999875
No 262
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-37 Score=354.51 Aligned_cols=279 Identities=21% Similarity=0.277 Sum_probs=205.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC--------CCCceeeeeeeecCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR--------HRNLIKIITICSSID 775 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 775 (1017)
.++|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999999999999999999743 334567889999999985 788999999886431
Q ss_pred CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC--
Q 043932 776 SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM-- 853 (1017)
Q Consensus 776 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 853 (1017)
......++||||+ ++++.+++..... ..+++.+++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 1236789999999 5577776655421 36899999999999999999999853 799999999999999775
Q ss_pred -----------------------------------------------CeEEeecccccccccccccccccCCCccccccc
Q 043932 854 -----------------------------------------------VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKG 886 (1017)
Q Consensus 854 -----------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~g 886 (1017)
.+||+|||.++..... .....|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCC
Confidence 8999999999865421 122468
Q ss_pred CccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc-----HHHHHHhhc--CchhhhhccchhhHHHH
Q 043932 887 TVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT-----LHEFAKIAL--PEKVIEIVDPLLLIEVM 959 (1017)
Q Consensus 887 t~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~-----~~~~~~~~~--~~~~~~~~d~~l~~~~~ 959 (1017)
|+.|+|||++.+..++.++|||||||++|||++|+.||......... ......... +.... ........+.
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~ 333 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYSKEFF 333 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHH--HHCTTGGGTB
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHh--hccccccccc
Confidence 99999999999989999999999999999999999999765433221 111111110 11000 0000000000
Q ss_pred hh-----------cchhH---HHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 960 AN-----------NSMIQ---EDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 960 ~~-----------~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. ..... ........+++..+.+++.+||+.||++|||+.|+++|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00 00000 00011234567889999999999999999999999976
No 263
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=348.84 Aligned_cols=277 Identities=20% Similarity=0.258 Sum_probs=202.7
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC-CCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSK-GAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 780 (1017)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ....+++.+|+.++++++||||+++++++...... ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999999999999999996533 23346788999999999999999999998654221 113
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..++||||++ ++|.+++.. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred eEEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 4589999997 588877642 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccC-CCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHH
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-SEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAK 939 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 939 (1017)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .......
T Consensus 171 g~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~ 238 (353)
T 3coi_A 171 GLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 238 (353)
T ss_dssp TCTTC-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHH
T ss_pred ccccCCCCC-----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999754321 123468999999999877 678999999999999999999999997643221 1111111
Q ss_pred hh-cC-chhhhhccchhhHHHHhhc-chhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 940 IA-LP-EKVIEIVDPLLLIEVMANN-SMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 940 ~~-~~-~~~~~~~d~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.. .+ ......+.......+.... .............+++.+.+++.+||+.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11 11 1111111111111111000 000001111122446789999999999999999999999976
No 264
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3e-37 Score=336.60 Aligned_cols=254 Identities=25% Similarity=0.309 Sum_probs=203.7
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS----- 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-----
Confidence 44578999999999999999999999899999999997443 23457889999999999999999999998654
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC---CCeE
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---MVSH 856 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 856 (1017)
+..++||||+++++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ +.+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CeEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 67899999999999999987643 689999999999999999999999 99999999999999764 4799
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHH
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHE 936 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~ 936 (1017)
|+|||++....... ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||....... ....
T Consensus 165 L~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~ 233 (287)
T 2wei_A 165 IIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKR 233 (287)
T ss_dssp ECSTTGGGTBCCCS---------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred EeccCcceeecCCC---------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 99999998654321 1112458999999999876 48999999999999999999999997642211 0111
Q ss_pred HHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 937 FAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 937 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
......+.. ......+++++.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 234 VETGKYAFD------------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHCCCCCC------------------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHcCCCCCC------------------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111000000 00112235678999999999999999999999985
No 265
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=366.76 Aligned_cols=174 Identities=13% Similarity=0.114 Sum_probs=97.6
Q ss_pred CCCCCCCCCCCCCc----eeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccc
Q 043932 53 GVTSSWNNTINLCQ----WTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLE 128 (1017)
Q Consensus 53 ~~~~sw~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 128 (1017)
..+++|.++.+||. |.++.|+. .++-....... ...-..+++++.|++++|.+++..+..|+++++|+
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~~--~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVYF--GFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSC------EECSSCCCCEE--SCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred ccccCCCCCCcCcccCcCceeEecCc------eeccccccccc--CcccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 34689998878884 77776642 11111111111 11112356677777777777644344456667777
Q ss_pred cccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCC
Q 043932 129 KLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNS 208 (1017)
Q Consensus 129 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 208 (1017)
+|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l------------ 146 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNT------------ 146 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC------------
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccC------------
Confidence 77777777766656666666666666666666666555556666666666666666554434444444
Q ss_pred CCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCc
Q 043932 209 LGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFS 258 (1017)
Q Consensus 209 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (1017)
++|++|+|++|.+++..|..|..+++|++|+|++|.++
T Consensus 147 ------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 147 ------------PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp ------------TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ------------CCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 45555555555555555555555555555555555554
No 266
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=345.36 Aligned_cols=269 Identities=23% Similarity=0.334 Sum_probs=202.0
Q ss_pred HHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeeecC
Q 043932 697 YAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICSSI 774 (1017)
Q Consensus 697 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1017)
..++....++|++.+.||+|+||.||+|++.. .||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 34455556899999999999999999999864 38999987442 23345677899999999999999999998754
Q ss_pred CCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC
Q 043932 775 DSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV 854 (1017)
Q Consensus 775 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 854 (1017)
+..++||||+++++|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++ ++.
T Consensus 102 -----~~~~iv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~ 167 (319)
T 2y4i_B 102 -----PHLAIITSLCKGRTLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGK 167 (319)
T ss_dssp -----SCEEEECBCCCSEEHHHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---C
T ss_pred -----CceEEEeecccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCC
Confidence 56899999999999999997654 2688999999999999999999999 999999999999998 689
Q ss_pred eEEeecccccccccccccccccCCCcccccccCccccCcccccC---------CCcCccccchhHHHHHHHHHhCCCCCC
Q 043932 855 SHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG---------SEASMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 855 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~pf~ 925 (1017)
+||+|||+++......... .........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 168 ~~l~Dfg~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 244 (319)
T 2y4i_B 168 VVITDFGLFSISGVLQAGR---REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244 (319)
T ss_dssp CEECCCSCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSS
T ss_pred EEEeecCCccccccccccc---cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999987653221111 1112223468999999999864 357889999999999999999999997
Q ss_pred cccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 926 AAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
....... ....... . .+.. ....++.++.+++.+||+.||++|||+.|+++.|
T Consensus 245 ~~~~~~~-~~~~~~~-~--------~~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 245 TQPAEAI-IWQMGTG-M--------KPNL-----------------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp SCCHHHH-HHHHHTT-C--------CCCC-----------------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred CCCHHHH-HHHhccC-C--------CCCC-----------------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 5422110 0000000 0 0000 0001245688999999999999999999999999
Q ss_pred hhccccc
Q 043932 1006 CHTRETF 1012 (1017)
Q Consensus 1006 ~~~~~~~ 1012 (1017)
+.+.++.
T Consensus 298 ~~l~~~~ 304 (319)
T 2y4i_B 298 EKLPKRN 304 (319)
T ss_dssp TTC----
T ss_pred HHHHHhh
Confidence 9998754
No 267
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.7e-37 Score=348.56 Aligned_cols=206 Identities=26% Similarity=0.346 Sum_probs=173.1
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CC-----Cceeeeeeeec
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HR-----NLIKIITICSS 773 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~ 773 (1017)
.....++|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|+.+++.++ |+ +|+++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 344568999999999999999999999999999999999733 233466778888888884 44 48999998876
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC--C
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD--H 851 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~ 851 (1017)
. +..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .
T Consensus 128 ~-----~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~ 196 (382)
T 2vx3_A 128 R-----NHLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPK 196 (382)
T ss_dssp T-----TEEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTT
T ss_pred C-----CceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCC
Confidence 5 67899999996 599999987532 3589999999999999999999953 22899999999999995 4
Q ss_pred CCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 043932 852 DMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAF 928 (1017)
Q Consensus 852 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~ 928 (1017)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 197 ~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 197 RSAIKIVDFGSSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp SCCEEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCcEEEEeccCceecccc-----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 788999999999865321 123568999999999999899999999999999999999999998643
No 268
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.7e-37 Score=341.59 Aligned_cols=263 Identities=23% Similarity=0.367 Sum_probs=198.7
Q ss_pred CcCHHHHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--cchHHHHHHHHHHHHhcC--CCCceeeee
Q 043932 694 TVSYAELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--KGAFKSFMAECKALRNIR--HRNLIKIIT 769 (1017)
Q Consensus 694 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~ 769 (1017)
.+.+..+....++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++ ||||+++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~ 95 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence 4445555566788999999999999999999996 58889999997543 234577899999999997 599999999
Q ss_pred eeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe
Q 043932 770 ICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL 849 (1017)
Q Consensus 770 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 849 (1017)
++... +..++||| +.+++|.+++.... .+++.+++.++.|+++||+|||++ +|+||||||+||++
T Consensus 96 ~~~~~-----~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~ 160 (313)
T 3cek_A 96 YEITD-----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLI 160 (313)
T ss_dssp EEECS-----SEEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred EeecC-----CEEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEE
Confidence 98664 67899999 55789999998754 688999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccC-----------CCcCccccchhHHHHHHHHH
Q 043932 850 DHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-----------SEASMTGDVYSFGILLLELF 918 (1017)
Q Consensus 850 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~ell 918 (1017)
+ ++.+||+|||+++........ .......||+.|+|||++.+ ..++.++||||||+++|||+
T Consensus 161 ~-~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 233 (313)
T 3cek_A 161 V-DGMLKLIDFGIANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233 (313)
T ss_dssp E-TTEEEECCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred E-CCeEEEeeccccccccCcccc------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence 6 489999999999866432211 11123468999999999875 46888999999999999999
Q ss_pred hCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCH
Q 043932 919 TGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEM 998 (1017)
Q Consensus 919 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 998 (1017)
+|+.||........ ..... .++.... .....+++.+.+++.+||+.||++||++
T Consensus 234 ~g~~pf~~~~~~~~---~~~~~---------~~~~~~~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps~ 287 (313)
T 3cek_A 234 YGKTPFQQIINQIS---KLHAI---------IDPNHEI--------------EFPDIPEKDLQDVLKCCLKRDPKQRISI 287 (313)
T ss_dssp HSSCTTTTCCSHHH---HHHHH---------HCTTSCC--------------CCCCCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hCCCchhhHHHHHH---HHHHH---------Hhccccc--------------CCcccchHHHHHHHHHHccCCcccCcCH
Confidence 99999975422111 11110 0100000 0000114568899999999999999999
Q ss_pred HHHHHHH
Q 043932 999 RDVVAKL 1005 (1017)
Q Consensus 999 ~evl~~L 1005 (1017)
.|++++-
T Consensus 288 ~ell~h~ 294 (313)
T 3cek_A 288 PELLAHP 294 (313)
T ss_dssp HHHHTSH
T ss_pred HHHhcCc
Confidence 9999864
No 269
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=352.71 Aligned_cols=180 Identities=19% Similarity=0.181 Sum_probs=116.9
Q ss_pred CCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEe
Q 043932 101 SFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAV 180 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 180 (1017)
++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46788888888888766777777777888888777777777777777777777777777777555556677777777777
Q ss_pred ccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccc
Q 043932 181 GKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGT 260 (1017)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (1017)
++|++++..|..|.++++|+.|++++|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+. .
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-~ 190 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-A 190 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC-E
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc-E
Confidence 777777666666777777777777766666655666666666666666666665444444555555555555555544 2
Q ss_pred cCchhhccCCccceeeecccc
Q 043932 261 LPFDIVVNLPNLKSLAIGGNN 281 (1017)
Q Consensus 261 l~~~~~~~l~~L~~L~L~~n~ 281 (1017)
++...+..+++|++|++++|.
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCT
T ss_pred eChhhcccCcccceeeCCCCc
Confidence 222233333344444443333
No 270
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.9e-36 Score=343.09 Aligned_cols=175 Identities=13% Similarity=0.110 Sum_probs=107.2
Q ss_pred CCCCCCCCCCCc-eeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCC
Q 043932 55 TSSWNNTINLCQ-WTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALP 133 (1017)
Q Consensus 55 ~~sw~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 133 (1017)
+++|....+||. |.+..|.....++ ............-..++++++|++++|.++...+..+..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 578988878875 4444442111111 2211111112222346788888888888874333346778888888888
Q ss_pred CCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCC
Q 043932 134 NNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKI 213 (1017)
Q Consensus 134 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 213 (1017)
+|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|++++|+++...+..|+++++|++|++++|.+++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 88888766677888888888888888887777777777777777777777777544444566666666666666666555
Q ss_pred CcccccccCcceeEeecCccc
Q 043932 214 PTTLGLLRNLVDLHVGGNQFS 234 (1017)
Q Consensus 214 ~~~l~~l~~L~~L~L~~n~l~ 234 (1017)
+..|+.+++|++|++++|+++
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCS
T ss_pred hhhccCCCCCCEEECCCCcCC
Confidence 555555555555555555554
No 271
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.6e-37 Score=346.22 Aligned_cols=266 Identities=20% Similarity=0.333 Sum_probs=203.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcch-----------------HHHHHHHHHHHHhcCCCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGA-----------------FKSFMAECKALRNIRHRNLIK 766 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 766 (1017)
.++|++.+.||+|+||.||+|++ +++.||+|++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 56899999999999999999999 89999999997432211 178899999999999999999
Q ss_pred eeeeeecCCCCCCceeEEEEEeccCCCHHHH------HhhCCCCccccccCHHHHHHHHHHHHHHHHHHhh-CCCCCcee
Q 043932 767 IITICSSIDSKGADFKALVFECMKNGSLEDW------LHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPMVH 839 (1017)
Q Consensus 767 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH 839 (1017)
+++++... +..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +|+|
T Consensus 108 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITNY-----DEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEESS-----SEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEeeC-----CeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 99998764 678999999999999998 44321 2478999999999999999999999 8 9999
Q ss_pred ecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC-CcCc-cccchhHHHHHHHH
Q 043932 840 GDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS-EASM-TGDVYSFGILLLEL 917 (1017)
Q Consensus 840 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~el 917 (1017)
|||||+||+++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++||||+||++|||
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 245 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999999999865432 11234689999999999887 5665 99999999999999
Q ss_pred HhCCCCCCcccccCccHHHHHHhhc--CchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCC
Q 043932 918 FTGRRPTDAAFTEGLTLHEFAKIAL--PEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFER 995 (1017)
Q Consensus 918 ltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 995 (1017)
++|+.||.................. +........+.. ..........+++.+.+++.+||+.||.+|
T Consensus 246 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 246 FYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT-----------NKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp HHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTC-----------C--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred HhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhcccc-----------ccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 9999999764332111111111100 000000000000 000011113346778999999999999999
Q ss_pred CCHHHHHHH
Q 043932 996 MEMRDVVAK 1004 (1017)
Q Consensus 996 Ps~~evl~~ 1004 (1017)
||+.|++++
T Consensus 315 ps~~e~l~h 323 (348)
T 2pml_X 315 ITSEDALKH 323 (348)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999885
No 272
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.1e-37 Score=341.63 Aligned_cols=261 Identities=22% Similarity=0.306 Sum_probs=178.4
Q ss_pred hhccccccC-cccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 703 ATSEFASSN-MIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 703 ~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
..++|.+.+ +||+|+||+||+|++..+++.||||++.... +...+....++.+.||||+++++++.... .+...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 356898855 6999999999999999999999999986431 22222333456679999999999986532 22366
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC---CCCeEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVSHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 858 (1017)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 8999999999999999986532 3689999999999999999999999 9999999999999976 4569999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||+++...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||..............
T Consensus 174 Dfg~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (336)
T 3fhr_A 174 DFGFAKETTQNA----------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243 (336)
T ss_dssp CCTTCEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccceeccccc----------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH
Confidence 999997654221 1124689999999999888899999999999999999999999976433211100000
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
.... ...... ......+++.+.+++.+||+.||.+|||+.|++++-.
T Consensus 244 ~~~~--~~~~~~-------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 244 RIRL--GQYGFP-------------------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp ---------CCC-------------------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hhhc--cccccC-------------------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 0000 000000 0011234567899999999999999999999998643
No 273
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.1e-37 Score=370.40 Aligned_cols=265 Identities=22% Similarity=0.364 Sum_probs=208.8
Q ss_pred HHHHHhhccccccCcccccCCceEEEEEeCC---CcEEEEEEEeeecCc-chHHHHHHHHHHHHhcCCCCceeeeeeeec
Q 043932 698 AELSKATSEFASSNMIGQGSFGSVYKGILGE---DEMIVAVKVINLKQK-GAFKSFMAECKALRNIRHRNLIKIITICSS 773 (1017)
Q Consensus 698 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1017)
.+.....++|++.+.||+|+||+||+|++.. .+..||+|++..... ...+.+.+|+.++++++||||+++++++..
T Consensus 383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 462 (656)
T 2j0j_A 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462 (656)
T ss_dssp GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 3444556789999999999999999999864 356799999875433 344778999999999999999999999742
Q ss_pred CCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCC
Q 043932 774 IDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDM 853 (1017)
Q Consensus 774 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 853 (1017)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 463 ------~~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~ 528 (656)
T 2j0j_A 463 ------NPVWIIMELCTLGELRSFLQVRKF-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 528 (656)
T ss_dssp ------SSCEEEEECCTTCBHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETT
T ss_pred ------CceEEEEEcCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCC
Confidence 347899999999999999986542 689999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHh-CCCCCCcccccCc
Q 043932 854 VSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGL 932 (1017)
Q Consensus 854 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~ 932 (1017)
.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 529 ~vkL~DFG~a~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 600 (656)
T 2j0j_A 529 CVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND- 600 (656)
T ss_dssp EEEECCCCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-
T ss_pred CEEEEecCCCeecCCCcce-------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-
Confidence 9999999999876432211 1112357889999999988899999999999999999997 999997642211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhcccc
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRET 1011 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 1011 (1017)
......... . ......+++.+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 601 ~~~~i~~~~-~--------------------------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 601 VIGRIENGE-R--------------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHHHHHHTC-C--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-C--------------------------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 000100000 0 001123456789999999999999999999999999988653
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.9e-37 Score=343.49 Aligned_cols=245 Identities=22% Similarity=0.314 Sum_probs=200.2
Q ss_pred HHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc------hHHHHHHHHHHHHhcC--CCCceeeeeeee
Q 043932 701 SKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFKSFMAECKALRNIR--HRNLIKIITICS 772 (1017)
Q Consensus 701 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~ 772 (1017)
....++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999999999999999999999754321 2245678999999996 599999999987
Q ss_pred cCCCCCCceeEEEEEeccC-CCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC-
Q 043932 773 SIDSKGADFKALVFECMKN-GSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD- 850 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~- 850 (1017)
.. +..++|||++.+ ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 119 ~~-----~~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~ 184 (320)
T 3a99_A 119 RP-----DSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDL 184 (320)
T ss_dssp CS-----SEEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEET
T ss_pred cC-----CcEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeC
Confidence 54 678999999976 89999998643 689999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCCcccc
Q 043932 851 HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTDAAFT 929 (1017)
Q Consensus 851 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~~~~~ 929 (1017)
.++.+||+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 185 ~~~~~kL~Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 254 (320)
T 3a99_A 185 NRGELKLIDFGSGALLKDTV----------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254 (320)
T ss_dssp TTTEEEECCCTTCEECCSSC----------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred CCCCEEEeeCcccccccccc----------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh
Confidence 78999999999998664321 122468999999999877665 7889999999999999999999965311
Q ss_pred cCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 930 EGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
....... . ...+++++.+++.+||+.||++|||+.|++++
T Consensus 255 -------~~~~~~~------~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 255 -------IIRGQVF------F----------------------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -------HHHCCCC------C----------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------hhccccc------c----------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1100000 0 01124568899999999999999999999885
No 275
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-36 Score=340.31 Aligned_cols=274 Identities=20% Similarity=0.271 Sum_probs=201.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCc-EEEEEEEeeecCcchHHHHHHHHHHHHhcCCCC------ceeeeeeeecCCC
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDE-MIVAVKVINLKQKGAFKSFMAECKALRNIRHRN------LIKIITICSSIDS 776 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1017)
.++|++.+.||+|+||+||+|++..++ +.||+|++... ....+.+.+|+.++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~-- 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-- 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET--
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC--
Confidence 568999999999999999999998766 79999999643 234467888999999997766 88888887655
Q ss_pred CCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEe-------
Q 043932 777 KGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLL------- 849 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll------- 849 (1017)
+..++||||+ ++++.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 95 ---~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 95 ---GHMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred ---CeEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 6789999999 6677777765432 3689999999999999999999999 99999999999999
Q ss_pred ------------CCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHH
Q 043932 850 ------------DHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLEL 917 (1017)
Q Consensus 850 ------------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 917 (1017)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 56789999999999754321 1235689999999999998999999999999999999
Q ss_pred HhCCCCCCcccccCccHHHHHHh--hcCchhhhhccch-------------h-hHHHH-hhcchhHHHhHHhHHHHHHHH
Q 043932 918 FTGRRPTDAAFTEGLTLHEFAKI--ALPEKVIEIVDPL-------------L-LIEVM-ANNSMIQEDIRAKTQECLNAI 980 (1017)
Q Consensus 918 ltg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~-------------l-~~~~~-~~~~~~~~~~~~~~~~~~~~l 980 (1017)
++|+.||....... ........ ..+..+....... . ..... ...... .........++.++
T Consensus 233 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 310 (355)
T 2eu9_A 233 YRGFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQL 310 (355)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCG-GGGCSCCSHHHHHH
T ss_pred HhCCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcc-cccccccchhHHHH
Confidence 99999997643221 11111111 1111111100000 0 00000 000000 00001112346689
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 043932 981 IRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 981 ~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.+++.+||+.||++|||+.|+++|
T Consensus 311 ~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 311 FDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHhcCChhhCcCHHHHhcC
Confidence 999999999999999999999865
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=340.73 Aligned_cols=248 Identities=23% Similarity=0.327 Sum_probs=193.5
Q ss_pred HHHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc------hHHHHHHHHHHHHhc----CCCCceeee
Q 043932 699 ELSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG------AFKSFMAECKALRNI----RHRNLIKII 768 (1017)
Q Consensus 699 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~ 768 (1017)
+.....++|++.+.||+|+||.||+|++..+++.||+|++...... ....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 4455677899999999999999999999989999999999754321 223456799999988 899999999
Q ss_pred eeeecCCCCCCceeEEEEEe-ccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCce
Q 043932 769 TICSSIDSKGADFKALVFEC-MKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNV 847 (1017)
Q Consensus 769 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 847 (1017)
+++... +..++|||| +.+++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||
T Consensus 105 ~~~~~~-----~~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 170 (312)
T 2iwi_A 105 DWFETQ-----EGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENI 170 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGE
T ss_pred EEEecC-----CeEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhE
Confidence 998654 567899999 78999999998643 689999999999999999999999 999999999999
Q ss_pred EeC-CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCc-CccccchhHHHHHHHHHhCCCCCC
Q 043932 848 LLD-HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEA-SMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 848 ll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~pf~ 925 (1017)
+++ .++.+||+|||++....... .....||..|+|||++.+..+ +.++||||+|+++|||++|+.||.
T Consensus 171 l~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 171 LIDLRRGCAKLIDFGSGALLHDEP----------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EEETTTTEEEECCCSSCEECCSSC----------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeCCCCeEEEEEcchhhhcccCc----------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 999 88999999999998664322 123468999999999877665 458999999999999999999996
Q ss_pred cccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 043932 926 AAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1005 (1017)
... ........ ....++..+.+++.+||+.||++|||+.|++++-
T Consensus 241 ~~~-------~~~~~~~~----------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 241 RDQ-------EILEAELH----------------------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp SHH-------HHHHTCCC----------------------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred ChH-------HHhhhccC----------------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 531 11100000 0012245688999999999999999999999853
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.6e-36 Score=332.56 Aligned_cols=256 Identities=29% Similarity=0.474 Sum_probs=233.4
Q ss_pred cceEEEecCCcccc--ccCccccccccccEEeccc-cCCCCCcchhhcccccccceeccccccccccCccccccccccee
Q 043932 374 SMIEFRIGGNQIFG--IIPSGIRNLVNLIALGMQS-NQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKL 450 (1017)
Q Consensus 374 ~L~~L~l~~N~i~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 450 (1017)
+++.|++++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 46777777777777 7788888889999999995 88888889889999999999999999988889889999999999
Q ss_pred eccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcc
Q 043932 451 VMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQF 530 (1017)
Q Consensus 451 ~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 530 (1017)
+|++|+|++.+|..+..+++|++|++++|++++.+|..+..+...+++|+|++|.+++.+|..+..++ |+.|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 99999999888989999999999999999998888988888875566799999999989999999987 99999999999
Q ss_pred cccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCC
Q 043932 531 SGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKG 610 (1017)
Q Consensus 531 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 610 (1017)
++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+.++++|+.|+|++|+++|.+|..+
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999987776 8899999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccCcccccCCcC
Q 043932 611 VFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 611 ~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
.+.+++.+++.+|+++||.|+
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cccccChHHhcCCCCccCCCC
Confidence 899999999999999999876
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.7e-36 Score=342.64 Aligned_cols=280 Identities=18% Similarity=0.271 Sum_probs=203.8
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-----------CCCceeeeeeee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-----------HRNLIKIITICS 772 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 772 (1017)
.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999999999999999998733 233467788999998886 899999999986
Q ss_pred cCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeC--
Q 043932 773 SIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLD-- 850 (1017)
Q Consensus 773 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-- 850 (1017)
... .+....++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 542 2234789999999 8899999987532 35899999999999999999999843 899999999999994
Q ss_pred ----CCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 851 ----HDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 851 ----~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CCCcCcceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4458999999999865421 1124689999999999998999999999999999999999999976
Q ss_pred ccccC-----ccHHHHHHhh--cCchhhhhccchhhHHHHhh-----------cchhH---HHhHHhHHHHHHHHHHHHh
Q 043932 927 AFTEG-----LTLHEFAKIA--LPEKVIEIVDPLLLIEVMAN-----------NSMIQ---EDIRAKTQECLNAIIRIGV 985 (1017)
Q Consensus 927 ~~~~~-----~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~-----------~~~~~---~~~~~~~~~~~~~l~~li~ 985 (1017)
..... .......... .+..... +......+... ..... .........+++++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 315 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHH--HCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHh--ccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHH
Confidence 43221 1111111111 1110000 00000000000 00000 0001123466888999999
Q ss_pred hccCCCCCCCCCHHHHHHHH
Q 043932 986 LCSMESPFERMEMRDVVAKL 1005 (1017)
Q Consensus 986 ~cl~~dP~~RPs~~evl~~L 1005 (1017)
+||+.||++|||+.|+++|-
T Consensus 316 ~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp GGGCSSTTTCBCHHHHHTCG
T ss_pred HHhccCccccCCHHHHhhCh
Confidence 99999999999999999863
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=334.16 Aligned_cols=255 Identities=20% Similarity=0.265 Sum_probs=182.5
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcc--hHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKG--AFKSFMAECKALRNIRHRNLIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1017)
...++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.++..+++.++||||+++++++...
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~----- 96 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN----- 96 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----
Confidence 3457899999999999999999999989999999999754332 223344555667888999999999998764
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhh-CCCCCceeecCCCCceEeCCCCCeEEe
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVSHVG 858 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~ 858 (1017)
+..++||||+ ++.+..+..... ..+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~ 167 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLC 167 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEEC
T ss_pred CcEEEEEecc-CCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEE
Confidence 6789999999 556666655432 268999999999999999999998 6 89999999999999999999999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCccccc-----CCCcCccccchhHHHHHHHHHhCCCCCCcccccCcc
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM-----GSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLT 933 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~ 933 (1017)
|||++....... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.........
T Consensus 168 dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 238 (318)
T 2dyl_A 168 DFGISGRLVDDK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238 (318)
T ss_dssp CCTTC-----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred ECCCchhccCCc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH
Confidence 999997654322 112246899999999984 456889999999999999999999999753221111
Q ss_pred HHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 934 LHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 934 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
.........+. . .....+++++.+++.+||+.||.+||++.|++++
T Consensus 239 ~~~~~~~~~~~-~------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 239 LTKVLQEEPPL-L------------------------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHSCCCC-C------------------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHhccCCCC-C------------------------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11111110000 0 0001135678899999999999999999999875
No 280
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-36 Score=338.69 Aligned_cols=260 Identities=22% Similarity=0.267 Sum_probs=179.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-chHHHHHHHHH-HHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-GAFKSFMAECK-ALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ....++..|+. +++.++||||+++++++... +.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----Cc
Confidence 4689999999999999999999999999999999975432 23345556666 66777999999999998764 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.++||||+++ +|.+++...... ....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 8999999976 888887641100 1136899999999999999999999842 79999999999999999999999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccc----cCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHH
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYC----MGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEF 937 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~ 937 (1017)
+++...... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||..........
T Consensus 172 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--- 239 (327)
T 3aln_A 172 ISGQLVDSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL--- 239 (327)
T ss_dssp SSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred Cceeccccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH---
Confidence 997654321 11123689999999998 45668999999999999999999999997532111000
Q ss_pred HHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 938 AKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 938 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
............. .....+++.+.+++.+||+.||++|||+.|++++
T Consensus 240 -~~~~~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 240 -TQVVKGDPPQLSN-------------------SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCCCCSCCCCCCC-------------------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -HHHhcCCCCCCCC-------------------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000000000000 0001235678999999999999999999999875
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.2e-36 Score=333.76 Aligned_cols=269 Identities=20% Similarity=0.286 Sum_probs=170.7
Q ss_pred CCCCHHHHHHHHHHHHhc-CCCCCCCCCC----CCCCCCCceeeEEECC--------CCCeEEEEEcCCCCCccccCccc
Q 043932 31 GQTNETDRLALLAIKSQL-HDTSGVTSSW----NNTINLCQWTGVTCGH--------RHQRVTRLDLSNQRIGGILSPYV 97 (1017)
Q Consensus 31 ~~~~~~~~~aLl~~k~~~-~~~~~~~~sw----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~~~~~~~l 97 (1017)
..+.++|++||++||+++ .|+.+.+++| ....++|.|.||+|.. ...+|+.|+|++|+++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 345678999999999999 5888888999 5567899999999942 3456777888887777 456667
Q ss_pred CCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccc------
Q 043932 98 GNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGS------ 171 (1017)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~------ 171 (1017)
+++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 77777888888777777 77777777777777777777777 67777777777777777777777777766554
Q ss_pred ---cCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCc
Q 043932 172 ---LLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLE 248 (1017)
Q Consensus 172 ---l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 248 (1017)
+++|++|+|++|+++ .+|..++++++|++|+|++|.+++ +|..++.+++|++|+|++|++.+.+|..+..+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 555555555555555 445555555555555555555542 333455555555555555555555555555555555
Q ss_pred EEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCc
Q 043932 249 RIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQ 305 (1017)
Q Consensus 249 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 305 (1017)
+|+|++|.+.+.+|.. +.++++|++|+|++|++.+.+|..++.+++|+.+++..|.
T Consensus 257 ~L~L~~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLD-IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EEECTTCTTCCBCCTT-GGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EEECCCCCchhhcchh-hhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 5555554444444433 2344444444444444444444444444444444444433
No 282
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.7e-36 Score=346.93 Aligned_cols=259 Identities=21% Similarity=0.266 Sum_probs=185.2
Q ss_pred ccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCceeE
Q 043932 705 SEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADFKA 783 (1017)
Q Consensus 705 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 783 (1017)
+.|...++||+|+||+||.+.. .+|+.||||++... ..+.+.+|+++++++ +||||+++++++... +..+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~-----~~~~ 85 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTD-----RFLY 85 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECS-----SEEE
T ss_pred heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecC-----CeEE
Confidence 3456678899999999987654 47889999998643 235678899999887 899999999988654 6789
Q ss_pred EEEEeccCCCHHHHHhhCCCCccc-cccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCC----------
Q 043932 784 LVFECMKNGSLEDWLHQSNDHLEV-CKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHD---------- 852 (1017)
Q Consensus 784 lv~e~~~~gsL~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---------- 852 (1017)
+||||++ |+|.+++......... ...++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999996 5999999875432111 1123445678999999999999999 99999999999999754
Q ss_pred ---CCeEEeecccccccccccccccccCCCcccccccCccccCcccccC-------CCcCccccchhHHHHHHHHHh-CC
Q 043932 853 ---MVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG-------SEASMTGDVYSFGILLLELFT-GR 921 (1017)
Q Consensus 853 ---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~ 921 (1017)
+.+||+|||+++......... ........||+.|+|||++.+ ..++.++||||+||++|||++ |+
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~ 237 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237 (434)
T ss_dssp CCSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSC
T ss_pred CCceEEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCC
Confidence 489999999998765432111 111223579999999999865 568999999999999999999 99
Q ss_pred CCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 043932 922 RPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDV 1001 (1017)
Q Consensus 922 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1001 (1017)
.||....... .............. ......+++++.+++.+||+.||.+|||+.|+
T Consensus 238 ~Pf~~~~~~~---~~i~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 293 (434)
T 2rio_A 238 HPFGDKYSRE---SNIIRGIFSLDEMK---------------------CLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293 (434)
T ss_dssp CTTCSTTTHH---HHHHHTCCCCCCCT---------------------TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCchhhH---HHHhcCCCCccccc---------------------ccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence 9996542211 11111111000000 00112346778999999999999999999999
Q ss_pred HHH
Q 043932 1002 VAK 1004 (1017)
Q Consensus 1002 l~~ 1004 (1017)
++|
T Consensus 294 l~h 296 (434)
T 2rio_A 294 LRH 296 (434)
T ss_dssp HTS
T ss_pred HhC
Confidence 875
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3e-35 Score=335.75 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=62.2
Q ss_pred ccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCC
Q 043932 512 LQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSF 591 (1017)
Q Consensus 512 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 591 (1017)
..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++. | +..+++
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~ 340 (390)
T 3o6n_A 266 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 340 (390)
T ss_dssp GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhcc
Confidence 334444555555555555542 33344455555555555555553 344455556666666666666533 2 445566
Q ss_pred CcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcC
Q 043932 592 LEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 592 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
|+.|++++|++++.... ..+..+....+.+++..|.++.
T Consensus 341 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 341 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTC
T ss_pred CCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccc
Confidence 66666666666654322 2334455556677877887654
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.6e-36 Score=353.89 Aligned_cols=277 Identities=23% Similarity=0.287 Sum_probs=199.3
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeec-CcchHHHHHHHHHHHHhcCCCCceeeeeeeecCCC-CCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLK-QKGAFKSFMAECKALRNIRHRNLIKIITICSSIDS-KGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 781 (1017)
.++|++.++||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++..... ...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999999989999999998754 23345678999999999999999999998755221 22467
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCC---eEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMV---SHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 858 (1017)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 7999999999999999986542 23588889999999999999999999 9999999999999997765 9999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||.+....... ......||+.|+|||++.+..++.++||||+||++|||++|..||...... ..+.
T Consensus 167 DFG~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~ 233 (676)
T 3qa8_A 167 DLGYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWH 233 (676)
T ss_dssp SCCCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSS
T ss_pred cccccccccccc---------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhh
Confidence 999998664322 112357899999999999999999999999999999999999999753211 0000
Q ss_pred HhhcCchhhh-hccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 043932 939 KIALPEKVIE-IVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDV 1001 (1017)
Q Consensus 939 ~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1001 (1017)
.......... ........... .....+.........++.+.+++.+||++||++|||+.|+
T Consensus 234 ~~i~~~~~~~~~~~~~l~g~~~--~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 234 GKVREKSNEHIVVYDDLTGAVK--FSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp TTCC------CCSCCCCSSSCC--CCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhcccchhhhhhhhhccccc--cccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000000000 00000000000 0000000001122346789999999999999999999884
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-35 Score=321.54 Aligned_cols=235 Identities=12% Similarity=0.075 Sum_probs=186.1
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCc
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1017)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+..+++++||||+++++++... +
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~ 104 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-----A 104 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----T
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-----C
Confidence 4689999999999999999999998999999999975432 3347789999999999999999999998765 6
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..|+||||+++++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC
T ss_pred cEEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec
Confidence 789999999999999999642 24557889999999999999999 9999999999999999999999744
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHh
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKI 940 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~ 940 (1017)
| |++ .++.++|||||||++|||++|+.||.............
T Consensus 174 ~----------------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~--- 215 (286)
T 3uqc_A 174 A----------------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE--- 215 (286)
T ss_dssp C----------------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---
T ss_pred c----------------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---
Confidence 3 333 36889999999999999999999998753321100000
Q ss_pred hcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhhccccc
Q 043932 941 ALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLCHTRETF 1012 (1017)
Q Consensus 941 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1012 (1017)
........ ........+++++.+++.+||+.||++| |+.|+++.|+.+....
T Consensus 216 ---~~~~~~~~----------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 216 ---RDTAGQPI----------------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp ---BCTTSCBC----------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred ---HHhccCCC----------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00000000 0001112346678999999999999999 9999999999987543
No 286
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=337.94 Aligned_cols=253 Identities=22% Similarity=0.311 Sum_probs=184.3
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCce
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
...+|.+.++||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++... ..
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~-----~~ 92 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDR-----QF 92 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEET-----TE
T ss_pred ccEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecC-----CE
Confidence 345799999999999999664433 4688999999864332 2356899999999 799999999988654 67
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC-----CCCeE
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH-----DMVSH 856 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~k 856 (1017)
.|+||||++ |+|.+++..... .....+++.++.||+.||+|||++ +|+||||||+||+++. ...+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~k 163 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAM 163 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEE
T ss_pred EEEEEECCC-CCHHHHHHhcCC-----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEE
Confidence 899999996 599999986643 344445678999999999999999 9999999999999953 23688
Q ss_pred EeecccccccccccccccccCCCcccccccCccccCccccc---CCCcCccccchhHHHHHHHHHh-CCCCCCcccccCc
Q 043932 857 VGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCM---GSEASMTGDVYSFGILLLELFT-GRRPTDAAFTEGL 932 (1017)
Q Consensus 857 l~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~pf~~~~~~~~ 932 (1017)
|+|||+|+........ ........||+.|+|||++. +..++.++||||+||++|||++ |..||......
T Consensus 164 L~DFG~a~~~~~~~~~-----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-- 236 (432)
T 3p23_A 164 ISDFGLCKKLAVGRHS-----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-- 236 (432)
T ss_dssp ECCTTEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--
T ss_pred EecccceeeccCCCcc-----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--
Confidence 9999999876432211 11123357999999999997 3567889999999999999999 99998543211
Q ss_pred cHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 043932 933 TLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1004 (1017)
..... .......... ........+.+++.+||+.||++|||+.||++|
T Consensus 237 -~~~~~---~~~~~~~~~~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 237 -QANIL---LGACSLDCLH--------------------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -HHHHH---TTCCCCTTSC--------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -HHHHH---hccCCccccC--------------------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00000 0000000000 001224557899999999999999999999965
No 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-35 Score=338.88 Aligned_cols=253 Identities=15% Similarity=0.147 Sum_probs=185.4
Q ss_pred hhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc---chHHHHHHHHHHHHhcCC-CCceeee---------e
Q 043932 703 ATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK---GAFKSFMAECKALRNIRH-RNLIKII---------T 769 (1017)
Q Consensus 703 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~---------~ 769 (1017)
....|...++||+|+||+||+|++..+|+.||||++..... ...+.+.+|+.+++.++| +|..... +
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 44568888999999999999999999999999999874332 235788999999999976 3221111 1
Q ss_pred e------------eecCCCCCCceeEEEEEeccCCCHHHHHhhCCC-CccccccCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 043932 770 I------------CSSIDSKGADFKALVFECMKNGSLEDWLHQSND-HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP 836 (1017)
Q Consensus 770 ~------------~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 836 (1017)
. +...........+++|+++ +++|.++++.... ......+++..++.++.||++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1 1110000123456777766 6799999852210 00124688889999999999999999999 9
Q ss_pred ceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccc----------cCCCcCcccc
Q 043932 837 MVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYC----------MGSEASMTGD 906 (1017)
Q Consensus 837 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~D 906 (1017)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 999999999999999999999999998764322 123467 999999999 5556889999
Q ss_pred chhHHHHHHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhh
Q 043932 907 VYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVL 986 (1017)
Q Consensus 907 vwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 986 (1017)
||||||++|||++|+.||......... ..+.. ....+++.+.+++.+
T Consensus 300 vwSlGvil~elltg~~Pf~~~~~~~~~-------------~~~~~--------------------~~~~~~~~~~~li~~ 346 (413)
T 3dzo_A 300 TWTLGLAIYWIWCADLPNTDDAALGGS-------------EWIFR--------------------SCKNIPQPVRALLEG 346 (413)
T ss_dssp HHHHHHHHHHHHHSSCCCCTTGGGSCS-------------GGGGS--------------------SCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhhhH-------------HHHHh--------------------hcccCCHHHHHHHHH
Confidence 999999999999999999764322110 00000 000224678999999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 043932 987 CSMESPFERMEMRDVVAK 1004 (1017)
Q Consensus 987 cl~~dP~~RPs~~evl~~ 1004 (1017)
||+.||++||++.|++++
T Consensus 347 ~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 347 FLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HTCSSGGGSCCHHHHTTS
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999998887654
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-35 Score=355.34 Aligned_cols=246 Identities=23% Similarity=0.345 Sum_probs=197.0
Q ss_pred hccccccCcccccCCceEEEEEeCC-CcEEEEEEEeeecC-cchHHHHHHHHHHHHhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGE-DEMIVAVKVINLKQ-KGAFKSFMAECKALRNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|++.++||+|+||+||+|++.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 4789999999999999999999975 78999999986443 234567889999999999999999999998764444444
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||
T Consensus 159 ~~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eEEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 7999999999999987643 589999999999999999999999 99999999999999875 99999999
Q ss_pred cccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHHHhh
Q 043932 862 LAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFAKIA 941 (1017)
Q Consensus 862 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 941 (1017)
+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+||........
T Consensus 227 ~a~~~~~~------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------- 284 (681)
T 2pzi_A 227 AVSRINSF------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------- 284 (681)
T ss_dssp TCEETTCC------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------
T ss_pred cchhcccC------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc---------
Confidence 99865421 225699999999998764 48899999999999999999998865332211
Q ss_pred cCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHHhhcc
Q 043932 942 LPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERME-MRDVVAKLCHTR 1009 (1017)
Q Consensus 942 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~ 1009 (1017)
+.. ......++.+.+++.+||+.||++||+ ++++.+.+..+.
T Consensus 285 -~~~-------------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 285 -PED-------------------------DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -CTT-------------------------CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -ccc-------------------------ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000 001123456889999999999999995 666666666543
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.4e-34 Score=314.27 Aligned_cols=239 Identities=19% Similarity=0.304 Sum_probs=183.7
Q ss_pred hcccccc-CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHH-HhcCCCCceeeeeeeecCCCCCCce
Q 043932 704 TSEFASS-NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKAL-RNIRHRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 704 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.++|.+. ++||+|+||.||+|.+..+++.||+|++... ..+.+|++++ +..+||||+++++++.... .+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY-AGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCce
Confidence 4567776 7899999999999999999999999998632 4567888888 5558999999999986521 22367
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCC---CCCeEEe
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDH---DMVSHVG 858 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 858 (1017)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 8999999999999999987532 3689999999999999999999999 9999999999999998 7899999
Q ss_pred ecccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCcccccCccHHHHH
Q 043932 859 DFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDAAFTEGLTLHEFA 938 (1017)
Q Consensus 859 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~~~~~~~~~~~~~ 938 (1017)
|||++.... +..++.++||||+||++|||++|+.||.........
T Consensus 163 Dfg~a~~~~------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----- 207 (299)
T 3m2w_A 163 DFGFAKETT------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----- 207 (299)
T ss_dssp CCTTCEECT------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------
T ss_pred ccccccccc------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----
Confidence 999986432 135678999999999999999999999754221100
Q ss_pred HhhcCchhhhhccchhhHHHHhhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHh
Q 043932 939 KIALPEKVIEIVDPLLLIEVMANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVVAKLC 1006 (1017)
Q Consensus 939 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1006 (1017)
....... .... .. ........+++++.+++.+||+.||++|||+.|+++|-.
T Consensus 208 -~~~~~~~---~~~~---------~~---~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 208 -PGMKTRI---RMGQ---------YE---FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp -CCSCCSS---CTTC---------CS---SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred -HHHHHHH---hhcc---------cc---CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 0000000 0000 00 000111234677899999999999999999999998643
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.5e-33 Score=314.66 Aligned_cols=214 Identities=22% Similarity=0.366 Sum_probs=114.2
Q ss_pred CCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEE
Q 043932 99 NLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTL 178 (1017)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 178 (1017)
.+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|. +..+++|++|+|++|.+++ +| .+.++++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred hcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEE
Confidence 4555666666666555 233 25556666666666666553 332 5566666666666666553 22 45556666666
Q ss_pred EeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCc
Q 043932 179 AVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFS 258 (1017)
Q Consensus 179 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (1017)
++++|.+++..+ +.++++|+.|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+.
T Consensus 116 ~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 666666553322 5555566666666554433322 25555666666666666553322 555566666666666555
Q ss_pred cccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcC
Q 043932 259 GTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNL 330 (1017)
Q Consensus 259 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (1017)
.++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+
T Consensus 191 -~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 191 -DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp -CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred -cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 2222 3455555566666555553322 5555556666666665554433 44444555555544444
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-33 Score=341.06 Aligned_cols=336 Identities=20% Similarity=0.236 Sum_probs=220.6
Q ss_pred CcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEe
Q 043932 245 SSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLN 324 (1017)
Q Consensus 245 ~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 324 (1017)
++++.|++++|.+. .+|..++.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..|+.+++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34444444444443 34444444445555555555555544444555555555555555555555555555555555555
Q ss_pred cccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEec
Q 043932 325 LEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGM 404 (1017)
Q Consensus 325 L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L 404 (1017)
|++|.++..... .+.++++|++|+|++|. ++++.|..|.++++|++|+|
T Consensus 130 L~~n~l~~l~~~------~~~~l~~L~~L~Ls~N~-------------------------l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 130 LERNDLSSLPRG------IFHNTPKLTTLSMSNNN-------------------------LERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp CCSSCCCCCCTT------TTTTCTTCCEEECCSSC-------------------------CCBCCTTTTTTCTTCCEEEC
T ss_pred eeCCCCCCCCHH------HhccCCCCCEEEeeCCc-------------------------CCCCChhhhhcCCcCcEEEC
Confidence 555544322221 12333444444444443 34456677888899999999
Q ss_pred cccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCC
Q 043932 405 QSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGA 484 (1017)
Q Consensus 405 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~ 484 (1017)
++|.+++.. ++.+++|+.|++++|.+++ +...++|++|++++|.++. +|..+ .++|+.|++++|.+++
T Consensus 179 ~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~- 246 (597)
T 3oja_B 179 SSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHNNLTD- 246 (597)
T ss_dssp TTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCC-
T ss_pred cCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccc-ccccc--CCCCCEEECCCCCCCC-
Confidence 999998653 5667889999999998874 3345679999999999884 34333 3688899999998885
Q ss_pred ccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccc
Q 043932 485 LPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGF 564 (1017)
Q Consensus 485 ~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 564 (1017)
+..+..+..+ ++|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 247 -~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~ 322 (597)
T 3oja_B 247 -TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 322 (597)
T ss_dssp -CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred -ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCccccc
Confidence 3445555544 468888888888778888888888888888888885 5666777888888888888888 46667788
Q ss_pred cccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcCC
Q 043932 565 LKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTDE 632 (1017)
Q Consensus 565 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 632 (1017)
+++|++|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|+.+..
T Consensus 323 l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 323 FDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp HTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCE
T ss_pred CCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchh
Confidence 88888888888888754 2 56677888888888888876432 23455556667777778876543
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5e-33 Score=312.26 Aligned_cols=308 Identities=25% Similarity=0.364 Sum_probs=197.4
Q ss_pred ccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCc
Q 043932 216 TLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASN 295 (1017)
Q Consensus 216 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 295 (1017)
.+..+++|++|++++|.++. ++ .+..+++|++|++++|.++ .++. +..+++|++|++++|.+++ + +.+..+++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTT
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCc
Confidence 34566777777777777763 33 3666777777777777776 3443 5566677777777776663 2 24666666
Q ss_pred cceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccc
Q 043932 296 VEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSM 375 (1017)
Q Consensus 296 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L 375 (1017)
|++|++++|++.+..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-------~~~~~l~~L~~L~l~~~~~~-------------- 168 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-------SPLSNMTGLNYLTVTESKVK-------------- 168 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-------GGGTTCTTCCEEECCSSCCC--------------
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-------cchhhCCCCcEEEecCCCcC--------------
Confidence 6666666666665433 555555666655555322110 11334444444444444433
Q ss_pred eEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCc
Q 043932 376 IEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYN 455 (1017)
Q Consensus 376 ~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 455 (1017)
+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|
T Consensus 169 -----------~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 169 -----------DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp -----------CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred -----------Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 2222 5556666666776666664433 6666666666776666664333 566666777777777
Q ss_pred ccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccccc
Q 043932 456 SLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIP 535 (1017)
Q Consensus 456 ~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 535 (1017)
++++..+ +..+++|+.|++++|+++ + + ..+..+++|+.|++++|++++.
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~-------------------------~-~-~~~~~l~~L~~L~l~~n~l~~~-- 280 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQIS-------------------------D-I-NAVKDLTKLKMLNVGSNQISDI-- 280 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCC-------------------------C-C-GGGTTCTTCCEEECCSSCCCCC--
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccC-------------------------C-C-hhHhcCCCcCEEEccCCccCCC--
Confidence 6664333 666666666666666665 2 1 2466778888888888888864
Q ss_pred ccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCc
Q 043932 536 VTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLE 603 (1017)
Q Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 603 (1017)
..+..+++|+.|+|++|++++..|..|+.+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 357888888888888888888888888888888888888888887666 778888888888888875
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.3e-35 Score=325.92 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=185.5
Q ss_pred hccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecC--------cchHHHHHHHHHHHHhcC---------CCCcee
Q 043932 704 TSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQ--------KGAFKSFMAECKALRNIR---------HRNLIK 766 (1017)
Q Consensus 704 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 766 (1017)
.++|++.+.||+|+||+||+|++ +++.||||++.... ....+.+.+|+.+++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46899999999999999999998 67999999998553 223477889999998886 666666
Q ss_pred eeeee-----------------ecCC--------CCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHH
Q 043932 767 IITIC-----------------SSID--------SKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAID 821 (1017)
Q Consensus 767 ~~~~~-----------------~~~~--------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~q 821 (1017)
+.+++ .... ..+.+..|+||||+++|++.+.+.+ ..+++.+++.++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHH
Confidence 65543 2200 0124678999999999976666643 25799999999999
Q ss_pred HHHHHHHHh-hCCCCCceeecCCCCceEeCCCC--------------------CeEEeecccccccccccccccccCCCc
Q 043932 822 VASAIEYLH-HHCQPPMVHGDLKPSNVLLDHDM--------------------VSHVGDFGLAKFLSSHQLDTASKTSSS 880 (1017)
Q Consensus 822 i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~ 880 (1017)
|+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999 89 999999999999999887 8999999999865421
Q ss_pred ccccccCccccCcccccCCCcCccccchhHHHH-HHHHHhCCCCCCcccccCccHHHHHHhhcCchhhhhccchhhHHHH
Q 043932 881 SIGIKGTVGYVAPEYCMGSEASMTGDVYSFGIL-LLELFTGRRPTDAAFTEGLTLHEFAKIALPEKVIEIVDPLLLIEVM 959 (1017)
Q Consensus 881 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 959 (1017)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||..................
T Consensus 236 --~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 295 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMT----------------- 295 (336)
T ss_dssp --EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCC-----------------
T ss_pred --cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhc-----------------
Confidence 246999999999998766 899999998777 78899999998431000000000000000
Q ss_pred hhcchhHHHhHHhHHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HH
Q 043932 960 ANNSMIQEDIRAKTQECLNAIIRIGVLCSMESPFERMEMRDVV-AK 1004 (1017)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~ 1004 (1017)
............+++++.+++.+||+.| |+.|++ +|
T Consensus 296 ----~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 296 ----FKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp ----CSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred ----cCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 0000001223456788999999999977 999998 65
No 294
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.5e-35 Score=346.90 Aligned_cols=362 Identities=15% Similarity=0.139 Sum_probs=203.8
Q ss_pred CcccEEEEecCCCCCCCCcc-cccccCcceeEeecCcccc----ccchhhcccCcCcEEeCCCccCccccCchhhccCC-
Q 043932 197 SALEVFSITGNSLGGKIPTT-LGLLRNLVDLHVGGNQFSG----TFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLP- 270 (1017)
Q Consensus 197 ~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~- 270 (1017)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+.+..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45666666666665433333 6667777777777777764 34566777788888888888876544444555555
Q ss_pred ---ccceeeecccccCC----CCCCccccCCccceeecccCcccceeecccc-----ccCccceEecccCcCCCCCCCCh
Q 043932 271 ---NLKSLAIGGNNFFG----SIPDSLSNASNVEILDLGFNQFKGKVSIDFS-----SLKNLSWLNLEQNNLGMGTANDL 338 (1017)
Q Consensus 271 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~ 338 (1017)
+|++|+|++|+++. .++..+..+++|++|++++|++++..+..+. ..++|++|+|++|+++.....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 68888888888874 4577788888888888888888765554433 345788888888877653322
Q ss_pred hhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCC----cc
Q 043932 339 DFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGT----IP 414 (1017)
Q Consensus 339 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~ 414 (1017)
.+...+..+++|++|++++|.+.+..+..+..... ..+++|++|+|++|.+++. ++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~--------------------~~~~~L~~L~L~~n~l~~~~~~~l~ 220 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK--------------------DSPCQLEALKLESCGVTSDNCRDLC 220 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH--------------------HSCCCCCEEECTTSCCBTTHHHHHH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh--------------------cCCCCceEEEccCCCCcHHHHHHHH
Confidence 33455667788888888888877554444433211 1123455555555555432 34
Q ss_pred hhhcccccccceecccccccccc-----CcccccccccceeeccCcccCCC----CccccccccCCceeecCCCcccCCc
Q 043932 415 DVIGELKNLQGLFLYKNVLQGSI-----PSGVGNLTKLAKLVMSYNSLQGN----IPSSLGNCQNLIGFNASHNKLTGAL 485 (1017)
Q Consensus 415 ~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~i~~~----~p~~~~~l~~L~~L~ls~N~l~~~~ 485 (1017)
..+..+++|++|+|++|.+++.. +..+..+++|++|++++|+++.. ++..+..+++|+.|++++|++++..
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 300 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG 300 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH
T ss_pred HHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH
Confidence 44455555555555555554321 11222355566666666665532 3445555666666666666654322
Q ss_pred cchhhhc----ccccceeccCCCcCCCC----ccccccccccceEEEccCCcccccccccccc-----cccceEEeccCC
Q 043932 486 PQQLLSI----TTLSVYLDLSNNNLNGS----LPLQIGNLKNLVKLIISSNQFSGVIPVTLST-----CVSLEYLDISSN 552 (1017)
Q Consensus 486 p~~~~~~----~~~~~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N 552 (1017)
+..+... ...+++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|+|++|
T Consensus 301 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 301 ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 2222111 01112233333333222 2334444555555555555555443333332 345555555555
Q ss_pred ccCC----CCCccccccccCcEEeccCCcccC
Q 043932 553 SFHG----VIPHSLGFLKSIKVLNFSSNNLSG 580 (1017)
Q Consensus 553 ~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 580 (1017)
++++ .+|..+..+++|++|+|++|++++
T Consensus 381 ~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 381 DVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 5553 445555555555555555555553
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.8e-32 Score=302.69 Aligned_cols=288 Identities=20% Similarity=0.232 Sum_probs=212.6
Q ss_pred cCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEec
Q 043932 246 SLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNL 325 (1017)
Q Consensus 246 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 325 (1017)
+++.+++++|.++ .+|..+. ++|++|++++|++++..|..+..+++|++|++++|++++..+..|..+++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5677777777776 6665442 56777778877777666677788888888888888888777777777777777777
Q ss_pred ccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEecc
Q 043932 326 EQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQ 405 (1017)
Q Consensus 326 ~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~ 405 (1017)
++|.+...+. .+. ++|++|++++|+++++.+..|.++++|+.|+++
T Consensus 110 ~~n~l~~l~~-------------------------------~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 110 SKNHLVEIPP-------------------------------NLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CSSCCCSCCS-------------------------------SCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC
T ss_pred CCCcCCccCc-------------------------------ccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECC
Confidence 7776653322 111 245555566666666666677888888888888
Q ss_pred ccCCC--CCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccC
Q 043932 406 SNQLH--GTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTG 483 (1017)
Q Consensus 406 ~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~ 483 (1017)
+|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..|.++++|+.|++++|+++
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~- 230 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR- 230 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC-
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC-
Confidence 88885 3667777777 88888888888874 555544 67888888888888777777888888877777777776
Q ss_pred CccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCcccc
Q 043932 484 ALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLG 563 (1017)
Q Consensus 484 ~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 563 (1017)
+..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+..|.
T Consensus 231 ------------------------~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 231 ------------------------MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp ------------------------CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ------------------------cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 344456777888889999999888 6777788888999999999999887777776
Q ss_pred cc------ccCcEEeccCCccc--CCChhhhcccCCCcEEEcccCC
Q 043932 564 FL------KSIKVLNFSSNNLS--GQIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 564 ~l------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
.+ ..|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 53 67889999999887 6778888889999999998885
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.3e-32 Score=303.17 Aligned_cols=218 Identities=27% Similarity=0.330 Sum_probs=137.8
Q ss_pred CCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEec
Q 043932 102 FLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVG 181 (1017)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1017)
+|+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4556666666665 5555543 466666666666665555666667777777777777766666667777777777777
Q ss_pred cccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccc--cccchhhcccCcCcEEeCCCccCcc
Q 043932 182 KNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFS--GTFPQSICNISSLERIYLPFNRFSG 259 (1017)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~ 259 (1017)
+|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~- 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT- 185 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-
Confidence 77766 3444443 56777777777776655566677777777777777764 2555666666 7777777777776
Q ss_pred ccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcC
Q 043932 260 TLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNL 330 (1017)
Q Consensus 260 ~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (1017)
.+|..++ ++|++|++++|++++..+..+..+++|+.|++++|++++..+..|..+++|++|+|++|++
T Consensus 186 ~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 186 GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 4554432 5666677777766666556666666666666666666655555555555555555444444
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=8.4e-36 Score=348.98 Aligned_cols=336 Identities=18% Similarity=0.147 Sum_probs=186.6
Q ss_pred ccccccccccCCCCcccc----cCCCcccCCCcceEeecccccccccCccccc-ccC----CccEEEeccccccC----C
Q 043932 122 GNLLRLEKLALPNNSFSG----TIPTNLSRCSNLIQLRVSNNKLEGQIPAEIG-SLL----KLQTLAVGKNYLTG----R 188 (1017)
Q Consensus 122 ~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~----~L~~L~L~~n~l~~----~ 188 (1017)
..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+. .++ +|++|+|++|+++. .
T Consensus 25 ~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~ 104 (461)
T 1z7x_W 25 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 104 (461)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHH
Confidence 334444444444444432 1233344444444444444444432222221 122 35555555554442 2
Q ss_pred CCccccCCCcccEEEEecCCCCCCCCccccc-----ccCcceeEeecCccccc----cchhhcccCcCcEEeCCCccCcc
Q 043932 189 LPDFVGNLSALEVFSITGNSLGGKIPTTLGL-----LRNLVDLHVGGNQFSGT----FPQSICNISSLERIYLPFNRFSG 259 (1017)
Q Consensus 189 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 259 (1017)
++..+.++++|++|++++|.+++..+..+.. .++|++|++++|++++. ++..+..+++|++|+|++|.+.+
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 3444555555555555555554333332222 34566666666666543 24455556667777777766653
Q ss_pred ccCchhhc----cCCccceeeecccccCCC----CCCccccCCccceeecccCccccee-----eccccccCccceEecc
Q 043932 260 TLPFDIVV----NLPNLKSLAIGGNNFFGS----IPDSLSNASNVEILDLGFNQFKGKV-----SIDFSSLKNLSWLNLE 326 (1017)
Q Consensus 260 ~l~~~~~~----~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~L~ 326 (1017)
..+..+.. ..++|++|++++|.+++. ++..+..+++|+.|++++|++++.. +..+..+++|++|+++
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~ 264 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECc
Confidence 22222211 244777777777777653 4566667777888888888776543 2223357788888888
Q ss_pred cCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhc----ccceEEEecCCccccc----cCcccccccc
Q 043932 327 QNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLS----SSMIEFRIGGNQIFGI----IPSGIRNLVN 398 (1017)
Q Consensus 327 ~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~----~~L~~L~l~~N~i~~~----~~~~~~~l~~ 398 (1017)
+|.++..+.. .++..+..+++|++|++++|.+.+..+..+.... ++|++|++++|.+++. ++..+..+++
T Consensus 265 ~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 342 (461)
T 1z7x_W 265 ECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342 (461)
T ss_dssp TSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred CCCCCHHHHH--HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCC
Confidence 8877542221 2445566788888888888888765555554432 3566666666666654 3444555666
Q ss_pred ccEEeccccCCCCCcchhhcc-----cccccceecccccccc----ccCcccccccccceeeccCcccCC
Q 043932 399 LIALGMQSNQLHGTIPDVIGE-----LKNLQGLFLYKNVLQG----SIPSGVGNLTKLAKLVMSYNSLQG 459 (1017)
Q Consensus 399 L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~i~~ 459 (1017)
|++|+|++|++++..+..+.. .++|++|+|++|.+++ .+|..+..+++|++|++++|+|++
T Consensus 343 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 343 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 777777777666544444432 4566666666666664 555666666666666666666653
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.3e-32 Score=300.76 Aligned_cols=199 Identities=22% Similarity=0.308 Sum_probs=107.2
Q ss_pred CCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEe
Q 043932 101 SFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAV 180 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 180 (1017)
+.|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+.
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---------- 120 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---------- 120 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC----------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc----------
Confidence 45666666666666544445555555555555555555544555555555555555555555 3333322
Q ss_pred ccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCcccc--ccchhhcccCcCcEEeCCCccCc
Q 043932 181 GKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSG--TFPQSICNISSLERIYLPFNRFS 258 (1017)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~ 258 (1017)
++|++|++++|.+++..+..|..+++|++|++++|+++. ..+..+..+++|++|++++|.++
T Consensus 121 ----------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 121 ----------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp ----------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred ----------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 344444444444444444444555555555555555532 44555666666666666666665
Q ss_pred cccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcC
Q 043932 259 GTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNL 330 (1017)
Q Consensus 259 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (1017)
.+|..++ ++|++|++++|++++..|..+..+++|+.|++++|++++..+..|..+++|++|+|++|++
T Consensus 185 -~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 252 (330)
T 1xku_A 185 -TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252 (330)
T ss_dssp -SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred -cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcC
Confidence 4444332 4566666666666655555666666666666666666555544444444444444444444
No 299
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=1e-31 Score=298.99 Aligned_cols=289 Identities=18% Similarity=0.207 Sum_probs=187.6
Q ss_pred cCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEec
Q 043932 246 SLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNL 325 (1017)
Q Consensus 246 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 325 (1017)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..+..+++|++|++++|++++..|..|..+++|++|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4555666666555 4554332 45666666666666555556667777777777777777666666666666666666
Q ss_pred ccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEecc
Q 043932 326 EQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQ 405 (1017)
Q Consensus 326 ~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~ 405 (1017)
++|.++..+.. +. ++|++|++++|.++++.+..|.++++|+.|+++
T Consensus 108 s~n~l~~l~~~-------------------------------~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 108 SKNQLKELPEK-------------------------------MP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CSSCCSBCCSS-------------------------------CC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCcCCccChh-------------------------------hc---ccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 66665432221 11 234444444444444555556667777777777
Q ss_pred ccCCCC--CcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccC
Q 043932 406 SNQLHG--TIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTG 483 (1017)
Q Consensus 406 ~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~ 483 (1017)
+|.+.. ..+..|.++++|++|++++|.++ .+|..+. ++|++|++++|++++..|..|.++++|+.|++++|+++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~- 229 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS- 229 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc-
Confidence 777753 55666777777777777777776 3454443 66777777777777666667777777777777766665
Q ss_pred CccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCcccc
Q 043932 484 ALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLG 563 (1017)
Q Consensus 484 ~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 563 (1017)
+..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|.
T Consensus 230 ------------------------~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 230 ------------------------AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp ------------------------EECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ------------------------eeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 233445667777888888888887 6677777888888888888888877666665
Q ss_pred cc------ccCcEEeccCCcccC--CChhhhcccCCCcEEEcccCC
Q 043932 564 FL------KSIKVLNFSSNNLSG--QIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 564 ~l------~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
.. +.|+.|++++|++.. ..|..|..+.+++.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 33 677888888888753 566777888888888888874
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=9.7e-31 Score=294.00 Aligned_cols=288 Identities=17% Similarity=0.188 Sum_probs=231.7
Q ss_pred CCCCCCCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCc
Q 043932 57 SWNNTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNS 136 (1017)
Q Consensus 57 sw~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 136 (1017)
.|.....+|.|.|+ | |.++++++.. |..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c----------~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-C----------KGSSGSLNSI-PSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-E----------ECCSTTCSSC-CTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-e----------eCCCCCcccc-ccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 34444578999988 7 4567778765 44443 589999999999997666689999999999999999
Q ss_pred ccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCC-ccccCCCcccEEEEecC-CCCCCCC
Q 043932 137 FSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLP-DFVGNLSALEVFSITGN-SLGGKIP 214 (1017)
Q Consensus 137 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~~ 214 (1017)
+++..|..|+++++|++|+|++|++++..+..|+++++|++|++++|++++..+ ..++++++|++|++++| .+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 998888899999999999999999997666669999999999999999996544 58999999999999999 5776677
Q ss_pred cccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccc---
Q 043932 215 TTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLS--- 291 (1017)
Q Consensus 215 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~--- 291 (1017)
..|+.+++|++|++++|++++..|..+..+++|++|++++|.+. .+|..++..+++|+.|++++|++++..+..+.
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccccccccccc
Confidence 89999999999999999999988999999999999999999996 78877777899999999999999976555443
Q ss_pred cCCccceeecccCcccc----eeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccc
Q 043932 292 NASNVEILDLGFNQFKG----KVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELP 365 (1017)
Q Consensus 292 ~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 365 (1017)
....++.+++++|.+.+ .+|..+..+++|++|+|++|+++..+.. .+..+++|++|+|++|++.+..|
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~------~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDG------IFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTT------TTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHH------HHhcCCCCCEEEeeCCCccCcCC
Confidence 34567777777777765 2455667777888888888877654432 23567777777777777776544
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.4e-32 Score=332.47 Aligned_cols=406 Identities=16% Similarity=0.154 Sum_probs=205.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCC
Q 043932 34 NETDRLALLAIKSQLHDTSGVTSSWNNTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSF 113 (1017)
Q Consensus 34 ~~~~~~aLl~~k~~~~~~~~~~~sw~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l 113 (1017)
-|+| .|..+-+.+.++.. ...+ ..-|++|.++.+... + .+.+.+ .....++..+..+++|++|+|+++..
T Consensus 16 LPde--il~~I~~~L~~~~d-~~~~--s~vck~W~~~~~~~~--~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~ 85 (592)
T 3ogk_B 16 TVDD--VIEQVMTYITDPKD-RDSA--SLVCRRWFKIDSETR--E--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPR 85 (592)
T ss_dssp CGGG--THHHHHTTCCCHHH-HHHH--TTSCHHHHHHHHHHC--C--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCG
T ss_pred CCHH--HHHHHHHhcCCHHH-HHHH--HHHhHHHHHhhhccc--c--EEEEee-ccccChHHHHHhCCCCeEEEecCCcc
Confidence 4555 45666655532211 1111 122457998854321 1 222332 23334455667888999999988532
Q ss_pred ---CCCCCcccc------------cccccccccCCCCcccccCCCcccCC--CcceEeeccccc-ccc-cCcccccccCC
Q 043932 114 ---HGEIPQEIG------------NLLRLEKLALPNNSFSGTIPTNLSRC--SNLIQLRVSNNK-LEG-QIPAEIGSLLK 174 (1017)
Q Consensus 114 ---~~~~p~~~~------------~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~-l~~-~~p~~~~~l~~ 174 (1017)
.+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 165 (592)
T 3ogk_B 86 AAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRK 165 (592)
T ss_dssp GGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTT
T ss_pred hhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCC
Confidence 134554443 56677777777777766655555553 337777777665 211 12222345667
Q ss_pred ccEEEeccccccCC----CCccccCCCcccEEEEecCCCCC----CCCcccccccCcceeEeecCccccccchhhcccCc
Q 043932 175 LQTLAVGKNYLTGR----LPDFVGNLSALEVFSITGNSLGG----KIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISS 246 (1017)
Q Consensus 175 L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 246 (1017)
|++|+|++|.+++. ++..+.++++|+.|++++|.+++ .++..+.++++|++|++++|.+.+ +|..+..+++
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 77777777776654 22334556666666666666652 223334455666666666666653 4556666666
Q ss_pred CcEEeCCCccCc---cccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceee-ccccccCccce
Q 043932 247 LERIYLPFNRFS---GTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVS-IDFSSLKNLSW 322 (1017)
Q Consensus 247 L~~L~Ls~N~l~---~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~ 322 (1017)
|++|+++.+... +..+ ..+..+++|+.|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|++
T Consensus 245 L~~L~l~~~~~~~~~~~~~-~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~ 322 (592)
T 3ogk_B 245 LEEFCGGSLNEDIGMPEKY-MNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEV 322 (592)
T ss_dssp CCEEEECBCCCCTTCTTSS-SCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCE
T ss_pred HHhhcccccccccchHHHH-HHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCE
Confidence 666666542221 0111 1223445555555555432 2444455555555555555555443322 22344555555
Q ss_pred EecccCcCCCCCCCChhhHhhhcccCcccEEecc-----------CcccccccchhHHhhcccceEEEecCCccccccCc
Q 043932 323 LNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLA-----------ANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPS 391 (1017)
Q Consensus 323 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls-----------~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~ 391 (1017)
|+++ +.+.. .........+++|++|+++ .|.+++.....+
T Consensus 323 L~L~-~~~~~-----~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l----------------------- 373 (592)
T 3ogk_B 323 LETR-NVIGD-----RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIAL----------------------- 373 (592)
T ss_dssp EEEE-GGGHH-----HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHH-----------------------
T ss_pred Eecc-CccCH-----HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHH-----------------------
Confidence 5555 22211 1112222344445555555 233332222222
Q ss_pred cccccccccEEeccccCCCCCcchhhcc-cccccceecc----ccccccc-----cCcccccccccceeeccCc--ccCC
Q 043932 392 GIRNLVNLIALGMQSNQLHGTIPDVIGE-LKNLQGLFLY----KNVLQGS-----IPSGVGNLTKLAKLVMSYN--SLQG 459 (1017)
Q Consensus 392 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~i~~ 459 (1017)
+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++
T Consensus 374 -~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~ 452 (592)
T 3ogk_B 374 -AQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD 452 (592)
T ss_dssp -HHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH
T ss_pred -HhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH
Confidence 234556666666666665555545444 5566666664 4455532 2223445666666666532 2443
Q ss_pred CCccccc-cccCCceeecCCCccc
Q 043932 460 NIPSSLG-NCQNLIGFNASHNKLT 482 (1017)
Q Consensus 460 ~~p~~~~-~l~~L~~L~ls~N~l~ 482 (1017)
..+..+. .+++|+.|++++|+++
T Consensus 453 ~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 453 LGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHHHHHHhCccceEeeccCCCCC
Confidence 3333333 2556666666666654
No 302
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.9e-31 Score=290.92 Aligned_cols=277 Identities=17% Similarity=0.226 Sum_probs=234.4
Q ss_pred HHhcCCCCCCCCCCCC--CCCCCceeeEEECCCCCeEEEEEcCCCCCcccc----Ccc--cCCCCCCCEEEccCCCCCCC
Q 043932 45 KSQLHDTSGVTSSWNN--TINLCQWTGVTCGHRHQRVTRLDLSNQRIGGIL----SPY--VGNLSFLRYINLSDNSFHGE 116 (1017)
Q Consensus 45 k~~~~~~~~~~~sw~~--~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~----~~~--l~~l~~L~~L~L~~n~l~~~ 116 (1017)
|.++.|+..++.+|.. ..++|.|.++.|...... -.-+...|.. +.. -...+++++|+|++|+++ .
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~-----~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~ 95 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNN-----PQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-Q 95 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTC-----TTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-S
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccc-----ccccccCCcchhhhHHHHhcccccceeEEEccCCCch-h
Confidence 4455566667788865 357999999988322110 0112222221 111 124588999999999999 8
Q ss_pred CCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccC-
Q 043932 117 IPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGN- 195 (1017)
Q Consensus 117 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~- 195 (1017)
+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|++++|++.+.+|..++.
T Consensus 96 lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~ 173 (328)
T 4fcg_A 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173 (328)
T ss_dssp CCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred cChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc
Confidence 9999999999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred --------CCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhc
Q 043932 196 --------LSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVV 267 (1017)
Q Consensus 196 --------l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~ 267 (1017)
+++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..+..+++|++|+|++|.+.+.+|. .+.
T Consensus 174 ~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~-~~~ 250 (328)
T 4fcg_A 174 DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPP-IFG 250 (328)
T ss_dssp C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCC-CTT
T ss_pred cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHH-Hhc
Confidence 999999999999998 888899999999999999999994 677899999999999999999888875 456
Q ss_pred cCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCC
Q 043932 268 NLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGM 332 (1017)
Q Consensus 268 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (1017)
.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..+.+..
T Consensus 251 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 251 GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999998876643
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.1e-31 Score=320.69 Aligned_cols=428 Identities=15% Similarity=0.116 Sum_probs=268.6
Q ss_pred CCCcccccccccccccCCCCcc---cccCCCccc------------CCCcceEeecccccccccCccccccc--CCccEE
Q 043932 116 EIPQEIGNLLRLEKLALPNNSF---SGTIPTNLS------------RCSNLIQLRVSNNKLEGQIPAEIGSL--LKLQTL 178 (1017)
Q Consensus 116 ~~p~~~~~l~~L~~L~L~~n~l---~~~~p~~l~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L 178 (1017)
..+..+..+++|++|+|+++.. .+.+|..++ ++++|++|+|++|.+++..+..++.. .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3344556778888888877532 234454444 57778888888887776666666653 348888
Q ss_pred Eecccc-ccC-CCCccccCCCcccEEEEecCCCCCC----CCcccccccCcceeEeecCccc----cccchhhcccCcCc
Q 043932 179 AVGKNY-LTG-RLPDFVGNLSALEVFSITGNSLGGK----IPTTLGLLRNLVDLHVGGNQFS----GTFPQSICNISSLE 248 (1017)
Q Consensus 179 ~L~~n~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~ 248 (1017)
+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 887765 221 1122234667777777777777655 3334556677777777777776 34455556677777
Q ss_pred EEeCCCccCccccCchhhccCCccceeeecccccC---CCCCCccccCCccceeecccCcccceeeccccccCccceEec
Q 043932 249 RIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFF---GSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNL 325 (1017)
Q Consensus 249 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 325 (1017)
+|+|++|.+.+ +| ..+..+++|++|+++++... +..+..+..+++|+.|+++++.. ...+..+..+++|++|+|
T Consensus 224 ~L~L~~~~~~~-l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~L 300 (592)
T 3ogk_B 224 SVKVGDFEILE-LV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDL 300 (592)
T ss_dssp EEECSSCBGGG-GH-HHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEE
T ss_pred EEeccCccHHH-HH-HHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEec
Confidence 77777777763 44 44566777777777653322 23344556666677776666432 234445556666666666
Q ss_pred ccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEecc
Q 043932 326 EQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQ 405 (1017)
Q Consensus 326 ~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~ 405 (1017)
++|.++. ......+..+++|++|+++ +.+.+. .++..+..+++|++|+++
T Consensus 301 s~~~l~~-----~~~~~~~~~~~~L~~L~L~-~~~~~~------------------------~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 301 LYALLET-----EDHCTLIQKCPNLEVLETR-NVIGDR------------------------GLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TTCCCCH-----HHHHHHHTTCTTCCEEEEE-GGGHHH------------------------HHHHHHHHCTTCCEEEEE
T ss_pred CCCcCCH-----HHHHHHHHhCcCCCEEecc-CccCHH------------------------HHHHHHHhCCCCCEEEee
Confidence 6665421 1122334555666666665 333221 222333556778888888
Q ss_pred -----------ccCCCCC-cchhhcccccccceeccccccccccCccccc-ccccceeecc----CcccCCC-----Ccc
Q 043932 406 -----------SNQLHGT-IPDVIGELKNLQGLFLYKNVLQGSIPSGVGN-LTKLAKLVMS----YNSLQGN-----IPS 463 (1017)
Q Consensus 406 -----------~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~i~~~-----~p~ 463 (1017)
.|.+++. .+..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|.+++. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3566643 2333566899999999999999877777765 8999999996 7888864 445
Q ss_pred ccccccCCceeecCCCc--ccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccc-cccccccc
Q 043932 464 SLGNCQNLIGFNASHNK--LTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSG-VIPVTLST 540 (1017)
Q Consensus 464 ~~~~l~~L~~L~ls~N~--l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~ 540 (1017)
.+.++++|+.|++++|. +++..+..+ ...+++|++|+|++|++++ .++..+.+
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~------------------------~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYI------------------------GQYSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHH------------------------HHSCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHH------------------------HHhCccceEeeccCCCCCHHHHHHHHhc
Confidence 57789999999998543 542222111 1235677788888887765 33445567
Q ss_pred cccceEEeccCCccCCC-CCccccccccCcEEeccCCcccCCChhhh-cccCCCcEEEcccC
Q 043932 541 CVSLEYLDISSNSFHGV-IPHSLGFLKSIKVLNFSSNNLSGQIPEFL-ENLSFLEFLNFSHN 600 (1017)
Q Consensus 541 l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N 600 (1017)
+++|+.|+|++|++++. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 487 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 487 CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 77888888888877644 23344567788888888888775533333 34566665555544
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-30 Score=281.38 Aligned_cols=253 Identities=20% Similarity=0.247 Sum_probs=196.9
Q ss_pred CCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccc--c
Q 043932 63 NLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSG--T 140 (1017)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~ 140 (1017)
..|.|.+|.|+. ++++.. |..+ .++|++|+|++|.++...+..|+++++|++|+|++|.++. .
T Consensus 5 C~C~~~~l~c~~------------~~l~~i-p~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNS------------KGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCS------------SCCSSC-CSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCC------------CCcccC-CCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 448999999954 334433 2222 2578888888888884333457888888888888888873 3
Q ss_pred CCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCC-ccccCCCcccEEEEecCCCCCCCCccccc
Q 043932 141 IPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLP-DFVGNLSALEVFSITGNSLGGKIPTTLGL 219 (1017)
Q Consensus 141 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 219 (1017)
.|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|.+++..+..+..
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 3666777888888888888888 567778888888888888888886655 57888888888888888888888888888
Q ss_pred ccCcceeEeecCcccc-ccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccce
Q 043932 220 LRNLVDLHVGGNQFSG-TFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEI 298 (1017)
Q Consensus 220 l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 298 (1017)
+++|++|++++|.+++ ..|..+..+++|++|+|++|+++ .++...+..+++|++|+|++|++++..+..+..+++|+.
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcC-CcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 8888888888888876 57788888888888888888887 444455677888888888888888766667888888888
Q ss_pred eecccCcccceeeccccccC-ccceEecccCcCCC
Q 043932 299 LDLGFNQFKGKVSIDFSSLK-NLSWLNLEQNNLGM 332 (1017)
Q Consensus 299 L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 332 (1017)
|++++|++++..+..+..++ +|++|+|++|.+..
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 88888888888887777774 78888888887753
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.5e-30 Score=279.95 Aligned_cols=276 Identities=22% Similarity=0.273 Sum_probs=214.8
Q ss_pred cEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCC--cchhhcccccccceec
Q 043932 351 KILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGT--IPDVIGELKNLQGLFL 428 (1017)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L 428 (1017)
+.++++++.++ .+|..+ .+++++|++++|+++.+.+..|.++++|++|+|++|+++.. .+..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCC---CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 34556666555 445432 24677778888887776666788888888888888888743 3667777888888888
Q ss_pred cccccccccCcccccccccceeeccCcccCCCCc-cccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCC
Q 043932 429 YKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIP-SSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLN 507 (1017)
Q Consensus 429 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~ 507 (1017)
++|.++ .+|..+.++++|++|++++|++++..+ ..+..+++|+.|++++|++++..|..+..+..+ ++|+|++|.++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~ 163 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQ 163 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC-CEEECTTCEEG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC-CEEECCCCccc
Confidence 888888 567778888888888888888886554 578888888888888888886666666665554 45888888887
Q ss_pred C-CccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhh
Q 043932 508 G-SLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFL 586 (1017)
Q Consensus 508 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 586 (1017)
+ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 6 578888999999999999999998888899999999999999999998888889999999999999999999999888
Q ss_pred cccC-CCcEEEcccCCCcCcCCCC---CCCCCCCcccccCcccccCCcCC
Q 043932 587 ENLS-FLEFLNFSHNDLEGEVPTK---GVFSSKTKLSLQGNVKLCGGTDE 632 (1017)
Q Consensus 587 ~~l~-~L~~L~l~~N~l~~~~~~~---~~~~~~~~~~~~~n~~~c~~~~~ 632 (1017)
..++ +|++|+|++|++++.++.. ..+...+.+....+...|..|..
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred HhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 8884 8999999999999876532 11223344555667777776654
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.4e-31 Score=291.79 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=202.0
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcc-cccCCCccc-------CCCcceEeecccccccccCccc
Q 043932 97 VGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSF-SGTIPTNLS-------RCSNLIQLRVSNNKLEGQIPAE 168 (1017)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l-~~~~p~~l~-------~l~~L~~L~L~~n~l~~~~p~~ 168 (1017)
++..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34456788888888888 788877765 88899999988 456777665 7889999999999998888887
Q ss_pred c--cccCCccEEEeccccccCCCCccccCC-----CcccEEEEecCCCCCCCCcccccccCcceeEeecCccccc--cch
Q 043932 169 I--GSLLKLQTLAVGKNYLTGRLPDFVGNL-----SALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGT--FPQ 239 (1017)
Q Consensus 169 ~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~--~p~ 239 (1017)
+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8889999999999999877 8888877 8899999999999888888899999999999999988765 344
Q ss_pred hh--cccCcCcEEeCCCccCcc--ccCchhhccCCccceeeecccccCCCCC-CccccCCccceeecccCcccceeeccc
Q 043932 240 SI--CNISSLERIYLPFNRFSG--TLPFDIVVNLPNLKSLAIGGNNFFGSIP-DSLSNASNVEILDLGFNQFKGKVSIDF 314 (1017)
Q Consensus 240 ~l--~~l~~L~~L~Ls~N~l~~--~l~~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 314 (1017)
.+ ..+++|++|+|++|++++ .++..++.++++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 788899999999998873 4455666778899999999999987765 45667889999999999998 445555
Q ss_pred cccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCccccc
Q 043932 315 SSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVG 362 (1017)
Q Consensus 315 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 362 (1017)
. ++|++|+|++|+++..+. +..+++|++|+|++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~p~--------~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRNPS--------PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSCCC--------TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCChh--------HhhCCCCCEEeccCCCCCC
Confidence 4 889999999999876521 5678889999999998875
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.7e-29 Score=272.06 Aligned_cols=253 Identities=23% Similarity=0.221 Sum_probs=194.4
Q ss_pred cEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccc
Q 043932 351 KILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYK 430 (1017)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 430 (1017)
+.++++++.++ .+|..+ ++++++|++++|.++++.+..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45666666665 445432 34677777777777777777788888888888888888877788888888888888888
Q ss_pred cc-cccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCC
Q 043932 431 NV-LQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGS 509 (1017)
Q Consensus 431 N~-l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~ 509 (1017)
|. ++...|..|.++++|++|++++|++++..|..|.++++|+.|++++|+++ +.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~ 144 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-------------------------AL 144 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-------------------------cc
Confidence 86 77666777888888888888888888777777888888888888777776 23
Q ss_pred ccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhccc
Q 043932 510 LPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENL 589 (1017)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (1017)
.+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+
T Consensus 145 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 224 (285)
T 1ozn_A 145 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred CHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccC
Confidence 34457778888888888888887777778888889999999998888888888888889999999998888777778888
Q ss_pred CCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcCC
Q 043932 590 SFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTDE 632 (1017)
Q Consensus 590 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 632 (1017)
++|+.|++++|++.+..+....+..+.......|...|..|..
T Consensus 225 ~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 225 RALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp TTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGG
T ss_pred cccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchH
Confidence 8888999999988887765433334455556667677766543
No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.1e-29 Score=296.60 Aligned_cols=215 Identities=21% Similarity=0.205 Sum_probs=110.1
Q ss_pred cceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeecc
Q 043932 374 SMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMS 453 (1017)
Q Consensus 374 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 453 (1017)
+|+.|++++|.++++.|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45566666666665555666666666666666666655444 5666666666666666653221 2556666666
Q ss_pred CcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcccccc-ccccceEEEccCCcccc
Q 043932 454 YNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIG-NLKNLVKLIISSNQFSG 532 (1017)
Q Consensus 454 ~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 532 (1017)
+|.|++..+. .+++|+.|++++|++++..|..+..+..+ ++|+|++|.+++..|..+. .+++|+.|+|++|.|++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 6666644333 23455555666555554444444333333 2344444444444444443 44555555555555543
Q ss_pred cccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCc
Q 043932 533 VIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLE 603 (1017)
Q Consensus 533 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 603 (1017)
..+ +..+++|+.|+|++|+|++.+| .|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 321 2234455555555555554322 24445555555555555553 3444444455555555555544
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=7e-30 Score=281.32 Aligned_cols=268 Identities=18% Similarity=0.187 Sum_probs=190.2
Q ss_pred CCCCCCCCCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCC-CCCCCcccc-------cccc
Q 043932 55 TSSWNNTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSF-HGEIPQEIG-------NLLR 126 (1017)
Q Consensus 55 ~~sw~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~ 126 (1017)
..+|.....|+.|..+.......+++.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++
T Consensus 21 ~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~ 96 (312)
T 1wwl_A 21 KPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISG 96 (312)
T ss_dssp SCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSC
T ss_pred ccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCC
Confidence 44676555666665554332344567777777777 455555443 77778888777 345666665 6778
Q ss_pred cccccCCCCcccccCCCcc--cCCCcceEeecccccccccCccccccc-----CCccEEEeccccccCCCCccccCCCcc
Q 043932 127 LEKLALPNNSFSGTIPTNL--SRCSNLIQLRVSNNKLEGQIPAEIGSL-----LKLQTLAVGKNYLTGRLPDFVGNLSAL 199 (1017)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L 199 (1017)
|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 8888888888887777765 7788888888888888766 7777766 778888888888877777778888888
Q ss_pred cEEEEecCCCCCC--CCccc--ccccCcceeEeecCcccc---ccchhhcccCcCcEEeCCCccCccccCchhhccCCcc
Q 043932 200 EVFSITGNSLGGK--IPTTL--GLLRNLVDLHVGGNQFSG---TFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNL 272 (1017)
Q Consensus 200 ~~L~L~~N~l~~~--~~~~l--~~l~~L~~L~L~~n~l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 272 (1017)
++|+|++|++.+. .+..+ ..+++|++|+|++|++++ .....+..+++|++|+|++|++++..|...+..+++|
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 255 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQL 255 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTC
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCC
Confidence 8888888877654 23344 677788888888888773 2223445677888888888888766655556667788
Q ss_pred ceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCC
Q 043932 273 KSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGM 332 (1017)
Q Consensus 273 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (1017)
++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|+|++|.++.
T Consensus 256 ~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 256 NSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 88888888887 6666665 7788888888888776 33 7777888888888887753
No 310
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=276.35 Aligned_cols=204 Identities=21% Similarity=0.224 Sum_probs=106.6
Q ss_pred ccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEE
Q 043932 124 LLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFS 203 (1017)
Q Consensus 124 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 203 (1017)
++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|++++..|..|+++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344444566666666 4555443 3566666666666544444555555555555555555554445555555555555
Q ss_pred EecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCc-hhhccCCccceeeeccc-c
Q 043932 204 ITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPF-DIVVNLPNLKSLAIGGN-N 281 (1017)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~-~~~~~l~~L~~L~L~~n-~ 281 (1017)
+++|++++.. +..+.++++|++|+|++|+++ .+|. ..+..+++|++|++++| .
T Consensus 107 Ls~n~l~~~~------------------------~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 107 LSYNYLSNLS------------------------SSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDT 161 (353)
T ss_dssp CCSSCCSSCC------------------------HHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSS
T ss_pred CCCCcCCcCC------------------------HhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCcc
Confidence 5555554333 333444555555555555554 3443 34445555555555555 2
Q ss_pred cCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccc
Q 043932 282 FFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFV 361 (1017)
Q Consensus 282 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 361 (1017)
+.+..+..+..+++|+.|++++|++++..+..|..+++|++|++++|.++... ...+..+++|+.|++++|+++
T Consensus 162 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~------~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 162 FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLL------EIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHH------HHHHHHTTTEEEEEEESCBCT
T ss_pred ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccch------hhhhhhcccccEEECCCCccc
Confidence 44344455666666666666666666655555666666666666555553211 112233445555555555544
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.3e-28 Score=284.25 Aligned_cols=252 Identities=22% Similarity=0.226 Sum_probs=164.4
Q ss_pred ccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceecc
Q 043932 350 LKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLY 429 (1017)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 429 (1017)
...++.+++.++ .+|..+ +++++.|++++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcC-ccCCCC---CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 345666666665 455433 3567788888888888888888888888888888888888878888888888888888
Q ss_pred ccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCC
Q 043932 430 KNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGS 509 (1017)
Q Consensus 430 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~ 509 (1017)
+|++++..+..|.++++|++|+|++|+|+...+..|.++++|+.|++++|...+.+|.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~---------------------- 189 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE---------------------- 189 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT----------------------
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh----------------------
Confidence 8888876667788888888888888888866666788888888888887443323332
Q ss_pred ccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhccc
Q 043932 510 LPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENL 589 (1017)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (1017)
..|..+++|++|+|++|++++. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++
T Consensus 190 --~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 265 (452)
T 3zyi_A 190 --GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 265 (452)
T ss_dssp --TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred --hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCC
Confidence 2344455555555555555532 2 35555555555555555555555555555555555555555555555555555
Q ss_pred CCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCcccccCCcC
Q 043932 590 SFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 590 ~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
++|+.|+|++|+|++.++. ...+.+++.+++.+|||.|+|..
T Consensus 266 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 266 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 5555555555555544443 23344555555555555555543
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=282.79 Aligned_cols=252 Identities=21% Similarity=0.218 Sum_probs=185.1
Q ss_pred ccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceecc
Q 043932 350 LKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLY 429 (1017)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 429 (1017)
...++.+++.++ .+|..+ ..+++.|++++|+|+.+.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 45 ~~~v~c~~~~l~-~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp SCEEECCSCCCS-SCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCEEEeCCCCcC-cCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 445666666665 555543 2467788888888888888888888888888888888888888888888888888888
Q ss_pred ccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCC
Q 043932 430 KNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGS 509 (1017)
Q Consensus 430 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~ 509 (1017)
+|++++..+..|.++++|++|+|++|+|+...+..|.++++|+.|++++|+..+.++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~----------------------- 177 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS----------------------- 177 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-----------------------
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC-----------------------
Confidence 888886666678888888888888888887666788888888888888754332222
Q ss_pred ccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhccc
Q 043932 510 LPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENL 589 (1017)
Q Consensus 510 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (1017)
+..|.++++|++|+|++|+++. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++
T Consensus 178 -~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 254 (440)
T 3zyj_A 178 -EGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254 (440)
T ss_dssp -TTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTC
T ss_pred -cchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCC
Confidence 2345666777777777777763 34 36677777777777777777667777777777777777777777777777777
Q ss_pred CCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCcccccCCcC
Q 043932 590 SFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 590 ~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
++|+.|+|++|+|++.++. ...+.+++.+++.+|||.|+|..
T Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred CCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 7777777777777765554 24556677777777777777765
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=9.1e-29 Score=294.27 Aligned_cols=294 Identities=22% Similarity=0.278 Sum_probs=169.3
Q ss_pred CCCCCCCCCCCCCCceeeEEEC------CCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCccccccc
Q 043932 52 SGVTSSWNNTINLCQWTGVTCG------HRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLL 125 (1017)
Q Consensus 52 ~~~~~sw~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 125 (1017)
....++|....+||.|+|..|. -....++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .++
T Consensus 9 ~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 9 DAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp -CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3445678777789999775431 01224677788888777 3454444 67777777777777 4555 456
Q ss_pred ccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEe
Q 043932 126 RLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSIT 205 (1017)
Q Consensus 126 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 205 (1017)
+|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 7777777777776 4555 56677777777777764 333 45566677777776664 3332 3556666666
Q ss_pred cCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCC
Q 043932 206 GNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGS 285 (1017)
Q Consensus 206 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~ 285 (1017)
+|++++ +|. .+++|+.|++++|++++ +| ..+++|+.|+|++|.++ .+|
T Consensus 150 ~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~-~l~----------------------- 197 (622)
T 3g06_A 150 DNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLA-SLP----------------------- 197 (622)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC-----------------------
T ss_pred CCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCC-CCC-----------------------
Confidence 666553 222 12445555555555552 33 22344555555555444 233
Q ss_pred CCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccc
Q 043932 286 IPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELP 365 (1017)
Q Consensus 286 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 365 (1017)
.. +++|+.|++++|.++.+.. .+++|++|+|++|+++..+ ..+++|+.|+|++|+|+
T Consensus 198 --~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~lp----------~~l~~L~~L~Ls~N~L~---- 254 (622)
T 3g06_A 198 --TL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSLP----------VLPSELKELMVSGNRLT---- 254 (622)
T ss_dssp --CC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCC----------CCCTTCCEEECCSSCCS----
T ss_pred --Cc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCcCC----------CCCCcCcEEECCCCCCC----
Confidence 21 2345555555555543221 1244555555555443321 12244455555555444
Q ss_pred hhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCccccccc
Q 043932 366 HSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLT 445 (1017)
Q Consensus 366 ~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 445 (1017)
.+ |. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++.+|..+..++
T Consensus 255 ---------------------~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 255 ---------------------SL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ---------------------CC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ---------------------cC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 22 22 3456777788888777 5577778888888888888888877777666555
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.3e-28 Score=280.01 Aligned_cols=221 Identities=18% Similarity=0.183 Sum_probs=186.6
Q ss_pred ceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccC
Q 043932 375 MIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSY 454 (1017)
Q Consensus 375 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (1017)
...++..++.++.+ |..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSEV-PQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCcc-CCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 45677778887754 44443 5788899999999888888888899999999999988888788888888999999999
Q ss_pred cccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccC-Cccccc
Q 043932 455 NSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISS-NQFSGV 533 (1017)
Q Consensus 455 N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~ 533 (1017)
|+|++..+..|.++++|+.|++++|+++ +..+..|.++++|+.|+|++ |.+...
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~l~~~~~l~~i 187 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIE-------------------------SIPSYAFNRVPSLMRLDLGELKKLEYI 187 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCC-------------------------EECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcc-------------------------eeCHhHHhcCCcccEEeCCCCCCcccc
Confidence 9888777777888888888888888876 23345678899999999999 566655
Q ss_pred ccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCC
Q 043932 534 IPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVF 612 (1017)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~ 612 (1017)
.+..|.++++|+.|+|++|++++. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|. ...+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 265 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 265 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred ChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCC
Confidence 566799999999999999999965 4 488999999999999999999999999999999999999999998775 4667
Q ss_pred CCCCcccccCccc
Q 043932 613 SSKTKLSLQGNVK 625 (1017)
Q Consensus 613 ~~~~~~~~~~n~~ 625 (1017)
.+++.+++.+|..
T Consensus 266 ~~L~~L~L~~N~l 278 (452)
T 3zyi_A 266 ASLVELNLAHNNL 278 (452)
T ss_dssp TTCCEEECCSSCC
T ss_pred CCCCEEECCCCcC
Confidence 8899999999953
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.8e-28 Score=278.75 Aligned_cols=222 Identities=18% Similarity=0.201 Sum_probs=185.7
Q ss_pred ceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccC
Q 043932 375 MIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSY 454 (1017)
Q Consensus 375 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (1017)
...++..++.++.+ |..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLREV-PDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSSC-CSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCcC-CCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 45677788888754 44443 5788888888888888888888888888888888888877778888888888888888
Q ss_pred cccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccC-Cccccc
Q 043932 455 NSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISS-NQFSGV 533 (1017)
Q Consensus 455 N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~ 533 (1017)
|+|++..+..|.++++|+.|++++|+++ +..+..|..+++|++|+|++ |.+...
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~-------------------------~~~~~~~~~l~~L~~L~l~~~~~l~~i 176 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIE-------------------------SIPSYAFNRIPSLRRLDLGELKRLSYI 176 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCC-------------------------EECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred CcCCeeCHhHhhccccCceeeCCCCccc-------------------------ccCHHHhhhCcccCEeCCCCCCCccee
Confidence 8888766677888888888888888876 23345678899999999999 556655
Q ss_pred ccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCC
Q 043932 534 IPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVF 612 (1017)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~ 612 (1017)
.+..|.++++|+.|+|++|+++. +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|. ...+
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 254 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTC
T ss_pred CcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCC
Confidence 56689999999999999999995 45 489999999999999999999999999999999999999999998775 4567
Q ss_pred CCCCcccccCcccc
Q 043932 613 SSKTKLSLQGNVKL 626 (1017)
Q Consensus 613 ~~~~~~~~~~n~~~ 626 (1017)
.+++.+++.+|...
T Consensus 255 ~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 255 QSLVEINLAHNNLT 268 (440)
T ss_dssp TTCCEEECTTSCCC
T ss_pred CCCCEEECCCCCCC
Confidence 88999999999543
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.2e-28 Score=263.75 Aligned_cols=223 Identities=22% Similarity=0.206 Sum_probs=130.5
Q ss_pred EEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccc
Q 043932 80 TRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNN 159 (1017)
Q Consensus 80 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (1017)
+.++.++++++... .. -.++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~ip-~~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAVP-VG--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSCC-TT--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccCC-cC--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 44556666666542 22 2356777777777777555566677777777777777777666666777777777777777
Q ss_pred c-ccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccc
Q 043932 160 K-LEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFP 238 (1017)
Q Consensus 160 ~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 238 (1017)
+ ++...|..|..+++|++|++++|.+++..|..|.++++|++|++++|++++..+..|+.+++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 555556666666666666666666666556666666666666666666655444445555555555555555554333
Q ss_pred hhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccC
Q 043932 239 QSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLK 318 (1017)
Q Consensus 239 ~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 318 (1017)
..+..+++ |++|+|++|++++..|..+..+++|+.|++++|++++..+..|..++
T Consensus 171 ~~~~~l~~-------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 171 RAFRGLHS-------------------------LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTCTT-------------------------CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HHhcCccc-------------------------cCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 34444444 44444444444444455555555555555555555554444455555
Q ss_pred ccceEecccCcC
Q 043932 319 NLSWLNLEQNNL 330 (1017)
Q Consensus 319 ~L~~L~L~~N~l 330 (1017)
+|++|++++|.+
T Consensus 226 ~L~~L~l~~N~~ 237 (285)
T 1ozn_A 226 ALQYLRLNDNPW 237 (285)
T ss_dssp TCCEEECCSSCE
T ss_pred ccCEEeccCCCc
Confidence 555555554444
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.7e-28 Score=270.89 Aligned_cols=249 Identities=20% Similarity=0.198 Sum_probs=145.6
Q ss_pred hccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhc
Q 043932 266 VVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLT 345 (1017)
Q Consensus 266 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 345 (1017)
+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+ |..+++|++|++++|+++. +.
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-----------l~ 96 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-----------LL 96 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-----------EE
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-----------cc
Confidence 3334444444444444444444445555555555555555544433 4444455555555444432 11
Q ss_pred ccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccc
Q 043932 346 NCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQG 425 (1017)
Q Consensus 346 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 425 (1017)
..++|++|++++|++++ ..+.. +++|++|++++|++++..+..+..+++|++
T Consensus 97 ~~~~L~~L~l~~n~l~~-------------------------~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 148 (317)
T 3o53_A 97 VGPSIETLHAANNNISR-------------------------VSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQY 148 (317)
T ss_dssp ECTTCCEEECCSSCCSE-------------------------EEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEE
T ss_pred CCCCcCEEECCCCccCC-------------------------cCccc---cCCCCEEECCCCCCCCccchhhhccCCCCE
Confidence 22445555555554442 22221 345666666666666666666666777777
Q ss_pred eeccccccccccCcccc-cccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCC
Q 043932 426 LFLYKNVLQGSIPSGVG-NLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNN 504 (1017)
Q Consensus 426 L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N 504 (1017)
|+|++|.+++..|..+. .+++|++|+|++|+|++. |. ...+++|+.|++++|+++
T Consensus 149 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~---------------------- 204 (317)
T 3o53_A 149 LDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA---------------------- 204 (317)
T ss_dssp EECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC----------------------
T ss_pred EECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC----------------------
Confidence 77777777665555553 567777777777777643 32 224667777777777665
Q ss_pred cCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccC-CCCCccccccccCcEEecc-CCcccCCC
Q 043932 505 NLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFH-GVIPHSLGFLKSIKVLNFS-SNNLSGQI 582 (1017)
Q Consensus 505 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~ 582 (1017)
.+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.++|..
T Consensus 205 ----~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 205 ----FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp ----EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSS
T ss_pred ----cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCc
Confidence 23334566677777777777777 45666777777777777777777 6667777777777777777 34566555
Q ss_pred hh
Q 043932 583 PE 584 (1017)
Q Consensus 583 p~ 584 (1017)
|.
T Consensus 280 ~~ 281 (317)
T 3o53_A 280 EE 281 (317)
T ss_dssp SC
T ss_pred hh
Confidence 54
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1e-26 Score=276.71 Aligned_cols=168 Identities=29% Similarity=0.361 Sum_probs=86.6
Q ss_pred ccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeec
Q 043932 397 VNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNA 476 (1017)
Q Consensus 397 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~l 476 (1017)
++|++|+|++|++++. |. .+++|+.|++++|.+++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++
T Consensus 141 ~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L 208 (622)
T 3g06_A 141 PGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWA 208 (622)
T ss_dssp TTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEEC
Confidence 4455555555555532 22 23455555555555553 33 234556666666666653 3332 245555556
Q ss_pred CCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCC
Q 043932 477 SHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHG 556 (1017)
Q Consensus 477 s~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 556 (1017)
++|+++ .+|..+ ..+++|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+
T Consensus 209 ~~N~l~-~l~~~~----~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~- 274 (622)
T 3g06_A 209 YNNRLT-SLPALP----SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT- 274 (622)
T ss_dssp CSSCCS-SCCCCC----TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-
T ss_pred cCCccc-ccCCCC----CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-
Confidence 655555 222111 111233334443332 33 234556666666666663 333 4456666666666666
Q ss_pred CCCccccccccCcEEeccCCcccCCChhhhcccC
Q 043932 557 VIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLS 590 (1017)
Q Consensus 557 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 590 (1017)
.+|..|..+++|+.|+|++|++++.+|..+..++
T Consensus 275 ~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 275 RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 4455666666666666666666666666555443
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-28 Score=271.25 Aligned_cols=171 Identities=16% Similarity=0.159 Sum_probs=100.8
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
.+....+++.+.+...+...+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..| +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 345666777777766655566667777788888877777666777777777777777777775544 777777777777
Q ss_pred ccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccc
Q 043932 157 SNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGT 236 (1017)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 236 (1017)
++|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..++.+++|++|++++|++++.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 777776322 2356666666666666443322 34455555555555444444444444444444444444443
Q ss_pred cchhhc-ccCcCcEEeCCCccC
Q 043932 237 FPQSIC-NISSLERIYLPFNRF 257 (1017)
Q Consensus 237 ~p~~l~-~l~~L~~L~Ls~N~l 257 (1017)
.+..+. .+++|++|+|++|.+
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l 181 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFI 181 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCC
T ss_pred cHHHHhhccCcCCEEECCCCcC
Confidence 333331 333444444444433
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=5.2e-30 Score=310.13 Aligned_cols=458 Identities=13% Similarity=0.096 Sum_probs=275.1
Q ss_pred CCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCC---CCCCcc------------cccccccc
Q 043932 64 LCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFH---GEIPQE------------IGNLLRLE 128 (1017)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~---~~~p~~------------~~~l~~L~ 128 (1017)
|++|.++.. .....+++.+.... .....+..+++|++|+|+++... +..|.. ...+++|+
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 557888722 12335556554322 12344678899999999997532 122222 24577899
Q ss_pred cccCCCCcccccCCCccc-CCCcceEeecccc-ccccc-CcccccccCCccEEEeccccccCCCCcccc----CCCcccE
Q 043932 129 KLALPNNSFSGTIPTNLS-RCSNLIQLRVSNN-KLEGQ-IPAEIGSLLKLQTLAVGKNYLTGRLPDFVG----NLSALEV 201 (1017)
Q Consensus 129 ~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~~ 201 (1017)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++. .+++|+.
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 999999988877776675 6889999999988 55533 444555788999999999988766555444 5668888
Q ss_pred EEEecCCCCCCCCccc----ccccCcceeEeecC-ccccccchhhcccCcCcEEeCCCcc-------CccccCchhhccC
Q 043932 202 FSITGNSLGGKIPTTL----GLLRNLVDLHVGGN-QFSGTFPQSICNISSLERIYLPFNR-------FSGTLPFDIVVNL 269 (1017)
Q Consensus 202 L~L~~N~l~~~~~~~l----~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~N~-------l~~~l~~~~~~~l 269 (1017)
|++++|. .......+ ..+++|++|++++| .++ .+|..+..+++|++|+++.+. +. .++. .+.++
T Consensus 189 L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~-~l~~~ 264 (594)
T 2p1m_B 189 LNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSV-ALSGC 264 (594)
T ss_dssp EECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHH-HHHTC
T ss_pred EEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHH-HHHH-HHhcC
Confidence 8888886 21112222 34588888888888 444 377778888888888865443 22 2222 34566
Q ss_pred Ccccee-eecccccCCCCCCccccCCccceeecccCcccceeec-cccccCccceEecccCcCCCCCCCChhhHhhhccc
Q 043932 270 PNLKSL-AIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSI-DFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNC 347 (1017)
Q Consensus 270 ~~L~~L-~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l 347 (1017)
++|+.| .+.+... +.++..+..+++|+.|++++|.+++.... .+..+++|++|++++| +.. ..+......+
T Consensus 265 ~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~-----~~l~~l~~~~ 337 (594)
T 2p1m_B 265 KELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED-----AGLEVLASTC 337 (594)
T ss_dssp TTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH-----HHHHHHHHHC
T ss_pred CCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH-----HHHHHHHHhC
Confidence 666666 3333222 23344444556666666666665533222 2345566666666655 211 1122222345
Q ss_pred CcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccc-cccccccEEeccccCCCCCcchhhc-ccccccc
Q 043932 348 SSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGI-RNLVNLIALGMQSNQLHGTIPDVIG-ELKNLQG 425 (1017)
Q Consensus 348 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~ 425 (1017)
++|+.|+++++.-.| ....+.+++.....+ ..+++|+.|.++.|.+++.....+. .+++|+.
T Consensus 338 ~~L~~L~L~~~~~~g----------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~ 401 (594)
T 2p1m_B 338 KDLRELRVFPSEPFV----------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTR 401 (594)
T ss_dssp TTCCEEEEECSCTTC----------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEEecCcccc----------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcce
Confidence 555555552210000 001223332222222 2366777777777777765555554 4777888
Q ss_pred eecc--c----cccccc-----cCcccccccccceeeccCcccCCCCcccccc-ccCCceeecCCCcccCCccchhhhcc
Q 043932 426 LFLY--K----NVLQGS-----IPSGVGNLTKLAKLVMSYNSLQGNIPSSLGN-CQNLIGFNASHNKLTGALPQQLLSIT 493 (1017)
Q Consensus 426 L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~-l~~L~~L~ls~N~l~~~~p~~~~~~~ 493 (1017)
|+|+ + |.+++. ++..+.++++|++|+|++ .+++..+..+.. +++|+.|++++|.+++.
T Consensus 402 L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~--------- 471 (594)
T 2p1m_B 402 FRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL--------- 471 (594)
T ss_dssp EEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH---------
T ss_pred eEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH---------
Confidence 8777 3 455421 122256678888888876 666554555554 78888888888887621
Q ss_pred cccceeccCCCcCCCCccccc-cccccceEEEccCCcccccccc-cccccccceEEeccCCccCCCCCccc-cccccCcE
Q 043932 494 TLSVYLDLSNNNLNGSLPLQI-GNLKNLVKLIISSNQFSGVIPV-TLSTCVSLEYLDISSNSFHGVIPHSL-GFLKSIKV 570 (1017)
Q Consensus 494 ~~~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~ 570 (1017)
.+..+ ..+++|++|+|++|++++.... ....+++|+.|++++|+++......+ ..+++|+.
T Consensus 472 ----------------~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i 535 (594)
T 2p1m_B 472 ----------------GMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNV 535 (594)
T ss_dssp ----------------HHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEE
T ss_pred ----------------HHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEE
Confidence 11122 4577888888888888654443 34558889999999888854333334 45678877
Q ss_pred EeccCCccc
Q 043932 571 LNFSSNNLS 579 (1017)
Q Consensus 571 L~Ls~N~l~ 579 (1017)
..+..+.-.
T Consensus 536 ~~~~~~~~~ 544 (594)
T 2p1m_B 536 EVIDERGAP 544 (594)
T ss_dssp EEECSSSCG
T ss_pred EEecCCCcc
Confidence 777766443
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=1.1e-29 Score=307.12 Aligned_cols=86 Identities=20% Similarity=0.147 Sum_probs=54.7
Q ss_pred cccceEEEccCCcccccccccc-cccccceEEeccCCccCCCCCc-cccccccCcEEeccCCcccCCChhhh-cccCCCc
Q 043932 517 LKNLVKLIISSNQFSGVIPVTL-STCVSLEYLDISSNSFHGVIPH-SLGFLKSIKVLNFSSNNLSGQIPEFL-ENLSFLE 593 (1017)
Q Consensus 517 l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 593 (1017)
+++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++.... ....+++|+.|+|++|+++......+ ..++.|+
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~ 534 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLN 534 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEE
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCE
Confidence 6677788888877765544444 5677788888888877544333 33457778888888877754433334 4566666
Q ss_pred EEEcccCCC
Q 043932 594 FLNFSHNDL 602 (1017)
Q Consensus 594 ~L~l~~N~l 602 (1017)
...+..+.-
T Consensus 535 i~~~~~~~~ 543 (594)
T 2p1m_B 535 VEVIDERGA 543 (594)
T ss_dssp EEEECSSSC
T ss_pred EEEecCCCc
Confidence 666655543
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.1e-28 Score=289.48 Aligned_cols=187 Identities=15% Similarity=0.022 Sum_probs=130.7
Q ss_pred cccccCCceEEEEEeCCCcEEEEEEEeeecC----------cchHHHHHHHHHHHHhc-CCCCceeeeeeeecCCCCCCc
Q 043932 712 MIGQGSFGSVYKGILGEDEMIVAVKVINLKQ----------KGAFKSFMAECKALRNI-RHRNLIKIITICSSIDSKGAD 780 (1017)
Q Consensus 712 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1017)
..+.|+.|.+..++..-.|+.||+|++.... ....+++.+|+++|+++ .|+||+++++++.+. .
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~-----~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA-----Q 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS-----S
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC-----C
Confidence 3566777777766665567789999997432 12346789999999999 799999999998765 7
Q ss_pred eeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeec
Q 043932 781 FKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDF 860 (1017)
Q Consensus 781 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 860 (1017)
..||||||++|++|.+++.... +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 7999999999999999998764 45554 4889999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCCC
Q 043932 861 GLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPT 924 (1017)
Q Consensus 861 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf 924 (1017)
|+|+...... ......+||+.|+|||++.+ .+..++|+||+|++++++.++..|+
T Consensus 384 GlAr~~~~~~--------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 384 GSIVTTPQDC--------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp TTEESCC-----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccCeeCCCCC--------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 9998654322 12234679999999999977 4677899999999988876665443
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.9e-26 Score=248.34 Aligned_cols=217 Identities=21% Similarity=0.275 Sum_probs=154.0
Q ss_pred CCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccC
Q 043932 62 INLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTI 141 (1017)
Q Consensus 62 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 141 (1017)
.++|.|.|+.|.-. ..++.+++++++++.. |..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~i-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTAI-PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCcc-CCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 37999999998532 2456788888888764 44343 57888888888888666667888888888888888887544
Q ss_pred CCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCccccccc
Q 043932 142 PTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLR 221 (1017)
Q Consensus 142 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 221 (1017)
+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|+++++|++|+|++|.+++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 55567788888888888888766666677777888888888877777677777777777777777777766556667777
Q ss_pred CcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccC
Q 043932 222 NLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFF 283 (1017)
Q Consensus 222 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~ 283 (1017)
+|++|+|++|++++..+..|..+++|++|+|++|+++ .+|...+..+++|+.|+|++|.+.
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC-cCCHHHhccccCCCEEEecCCCee
Confidence 7777777777776555556666666666666666665 455555555555666666655554
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.2e-27 Score=274.83 Aligned_cols=235 Identities=14% Similarity=0.183 Sum_probs=175.6
Q ss_pred cccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceec
Q 043932 349 SLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFL 428 (1017)
Q Consensus 349 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 428 (1017)
+|+.|+|++|.+++..|..+..+ ++|+.|++++|.+++..| |..+++|++|+|++|.|++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPF-TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTC-TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCC-CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 56666666666665555555444 356666666666665554 7777777777777777764432 267777777
Q ss_pred cccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCC
Q 043932 429 YKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNG 508 (1017)
Q Consensus 429 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~ 508 (1017)
++|.+++..+. .+++|++|+|++|+|++..|..|+++++|+.|++++|++++..|..+......+++|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 77777765544 346677777777777777777777777777788888877776666665333334567888888775
Q ss_pred CccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCccc-CCChhhhc
Q 043932 509 SLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLS-GQIPEFLE 587 (1017)
Q Consensus 509 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 587 (1017)
. | .+..+++|+.|+|++|+|++.+| .|..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|++. +.+|..+.
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 V-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred c-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 5 3 23468999999999999997544 59999999999999999996 6778999999999999999998 77888899
Q ss_pred ccCCCcEEEcc
Q 043932 588 NLSFLEFLNFS 598 (1017)
Q Consensus 588 ~l~~L~~L~l~ 598 (1017)
.++.|+.++++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 89888888886
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.2e-26 Score=245.91 Aligned_cols=228 Identities=21% Similarity=0.249 Sum_probs=178.7
Q ss_pred EeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccc
Q 043932 353 LSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNV 432 (1017)
Q Consensus 353 L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 432 (1017)
++..+..+. .+|..+ +.++++|++++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 12 ~~c~~~~l~-~ip~~l---~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNL---PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSS---CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCC---CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 344444444 444432 3457778888888887777788888888888888888887777788888888888888888
Q ss_pred cccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccc
Q 043932 433 LQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPL 512 (1017)
Q Consensus 433 l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~ 512 (1017)
+++..+..|.++++|++|++++|++++..+..+.++++|+.|++++|++++. .+|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~l~~ 143 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------KLPE 143 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------------------------CCCG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee------------------------cCch
Confidence 8877777888888888888888888876666788888888888888877620 2467
Q ss_pred cccccccceEEEccCCcccccccccccccccce----EEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcc
Q 043932 513 QIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLE----YLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLEN 588 (1017)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 588 (1017)
.+..+++|++|+|++|++++..+..|..+++|+ .|++++|++++..+..+.. .+|+.|+|++|++++..+..+.+
T Consensus 144 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcc
Confidence 788888899999999999887778888877777 8899999998776666654 47999999999998777777788
Q ss_pred cCCCcEEEcccCCCcCcCCCC
Q 043932 589 LSFLEFLNFSHNDLEGEVPTK 609 (1017)
Q Consensus 589 l~~L~~L~l~~N~l~~~~~~~ 609 (1017)
+++|+.|++++|++++.+|..
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTT
T ss_pred cccccEEEccCCcccccCCch
Confidence 999999999999998887753
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.5e-25 Score=243.21 Aligned_cols=209 Identities=22% Similarity=0.200 Sum_probs=164.1
Q ss_pred cccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCC
Q 043932 392 GIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNL 471 (1017)
Q Consensus 392 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L 471 (1017)
.+.++++++.+++++|.++. +|..+. ++++.|+|++|.+++..|..|.++++|++|+|++|+|++. +.. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 35667778888888888874 444333 5778888888888877777788888888888888888743 332 667777
Q ss_pred ceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccC
Q 043932 472 IGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISS 551 (1017)
Q Consensus 472 ~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 551 (1017)
+.|++++|+++ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~--------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 80 GTLDLSHNQLQ--------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CEEECCSSCCS--------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC--------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 77777777775 4556667788888889999988877778888888999999999
Q ss_pred CccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcC
Q 043932 552 NSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 552 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+..++......+++.+.+.+|||.|+|..
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCcc
Confidence 99888888888888899999999999887666677888889999999999886655555666788888999999998753
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=8.1e-25 Score=236.54 Aligned_cols=205 Identities=17% Similarity=0.170 Sum_probs=150.7
Q ss_pred CCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEe
Q 043932 101 SFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAV 180 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 180 (1017)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998766678888899999999999888777778888889999999999888777788888888888888
Q ss_pred ccccccCCCCccccCCCcccEEEEecCCCCCC-CCcccccccCcceeEeecCccccccchhhcccCcCc----EEeCCCc
Q 043932 181 GKNYLTGRLPDFVGNLSALEVFSITGNSLGGK-IPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLE----RIYLPFN 255 (1017)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~Ls~N 255 (1017)
++|.+++..+..++++++|++|++++|.+++. +|..++.+++|++|++++|++++..+..+..+++|+ +|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 88888877777788888888888888888763 577888888888888888888776666676666665 6666666
Q ss_pred cCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCccc
Q 043932 256 RFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFK 307 (1017)
Q Consensus 256 ~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 307 (1017)
.++ .++...+. ..+|++|+|++|++++..+..+..+++|+.|++++|++.
T Consensus 188 ~l~-~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 188 PMN-FIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CCC-EECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ccc-ccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 665 34433332 224555555555555444444445555555555555544
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.2e-24 Score=232.06 Aligned_cols=183 Identities=22% Similarity=0.253 Sum_probs=91.6
Q ss_pred cccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecC
Q 043932 398 NLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNAS 477 (1017)
Q Consensus 398 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls 477 (1017)
+|+.|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|++++|++++..+..|.++++|+.|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 34455555555544444444445555555555555443333334445555555555555544444444444444444444
Q ss_pred CCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCC
Q 043932 478 HNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGV 557 (1017)
Q Consensus 478 ~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 557 (1017)
+|+++ +..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 118 ~n~l~-------------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 118 RNQLK-------------------------SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCccC-------------------------eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 44443 12233344555555555555555544444455555555555555555555
Q ss_pred CCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCc
Q 043932 558 IPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGE 605 (1017)
Q Consensus 558 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 605 (1017)
.+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 455555555555555555555544444455555555555555544443
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5e-24 Score=231.18 Aligned_cols=203 Identities=24% Similarity=0.296 Sum_probs=149.8
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCcc
Q 043932 97 VGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQ 176 (1017)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 176 (1017)
++++++|+++++++|+++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|.+++..+ . +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 567777888888888887 5666554 577888888888877777778888888888888888775433 2 6777788
Q ss_pred EEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCcc
Q 043932 177 TLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNR 256 (1017)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 256 (1017)
+|++++|+++ .+|..+.++++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888877 566777777777777777777776666777777777777777777776666667777777777777777
Q ss_pred CccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCccc
Q 043932 257 FSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFK 307 (1017)
Q Consensus 257 l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 307 (1017)
++ .+|...+..+++|++|+|++|+++ .+|..+....+|+.|+|++|++.
T Consensus 160 l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 76 666666667777777777777776 56666666667777777777654
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.3e-24 Score=232.17 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=117.5
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCcc
Q 043932 97 VGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQ 176 (1017)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 176 (1017)
+..+++|+.|++++|.++. + ..++.+++|++|+|++|.+++ + ..+.++++|++|+|++|.+++..+..|+++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3445555555555555552 2 235555556666666555553 2 2455555666666666665555555555556666
Q ss_pred EEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCcc
Q 043932 177 TLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNR 256 (1017)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 256 (1017)
+|++++|++++..+..|+++++|++|++++|.+++..+..++.+++|++|++++|++++..+..+..+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 66666666655555555556666666666666655555555555666666666666655555555556666666666666
Q ss_pred CccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccC
Q 043932 257 FSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLK 318 (1017)
Q Consensus 257 l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 318 (1017)
++ .++...+..+++|++|+|++|.+.+. +++|+.|+++.|+++|.+|..++.+.
T Consensus 193 l~-~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 193 LK-SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CC-ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 65 33434455556666666666655432 33455666666666666665554443
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4.7e-24 Score=229.69 Aligned_cols=208 Identities=22% Similarity=0.265 Sum_probs=190.7
Q ss_pred CeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeec
Q 043932 77 QRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRV 156 (1017)
Q Consensus 77 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 156 (1017)
..++.|+++++.++.. +.++.+++|++|+|++|.+++ + ..++.+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4688999999998864 468999999999999999996 3 48999999999999999999888888999999999999
Q ss_pred ccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccc
Q 043932 157 SNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGT 236 (1017)
Q Consensus 157 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 236 (1017)
++|++++..|..|+++++|++|++++|++++..+..++++++|+.|++++|++++..+..++.+++|++|++++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 99999988888899999999999999999988888899999999999999999988888899999999999999999988
Q ss_pred cchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCcc
Q 043932 237 FPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNV 296 (1017)
Q Consensus 237 ~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 296 (1017)
.+..+..+++|++|+|++|.+.+. +++|+.|+++.|.++|.+|..++.+...
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~--------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCT--------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC--------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred CHHHHhCCcCCCEEEccCCCcccc--------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 888899999999999999998754 4579999999999999999999877653
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.9e-24 Score=226.63 Aligned_cols=192 Identities=19% Similarity=0.216 Sum_probs=155.1
Q ss_pred CCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCC
Q 043932 63 NLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIP 142 (1017)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 142 (1017)
+||.|.|.+|... .+.+++++++++.. |..+. ++|+.|+|++|++++..|..|+++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~~~-p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLDSV-PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCSSC-CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcccc-CCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 6899999999532 34688999988864 34443 578999999999988888888888999999999999888777
Q ss_pred CcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccC
Q 043932 143 TNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRN 222 (1017)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 222 (1017)
..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 78888888999999988888777777888888888888888888777777788888888888888888777767888888
Q ss_pred cceeEeecCccccccchhhcccCcCcEEeCCCccCccc
Q 043932 223 LVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGT 260 (1017)
Q Consensus 223 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (1017)
|++|+|++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888876666777777788888887777643
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.7e-25 Score=249.05 Aligned_cols=266 Identities=18% Similarity=0.192 Sum_probs=137.4
Q ss_pred EEEccCCCCCCCCCcccccccccccccCCCCcccccCC----CcccCCC-cceEeecccccccccCccccccc-----CC
Q 043932 105 YINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIP----TNLSRCS-NLIQLRVSNNKLEGQIPAEIGSL-----LK 174 (1017)
Q Consensus 105 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 174 (1017)
+++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677777777777666666667777777777775554 5566666 67777777777776666666554 66
Q ss_pred ccEEEeccccccCCCCccccCC-----CcccEEEEecCCCCCCCCccccc-----ccCcceeEeecCcccccc----chh
Q 043932 175 LQTLAVGKNYLTGRLPDFVGNL-----SALEVFSITGNSLGGKIPTTLGL-----LRNLVDLHVGGNQFSGTF----PQS 240 (1017)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~~----p~~ 240 (1017)
|++|+|++|++++..+..+... ++|++|+|++|.+++..+..+.. .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 6666666666665544433322 45555555555554444333322 134444444444444322 122
Q ss_pred hcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccc----cC-CccceeecccCccccee----e
Q 043932 241 ICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLS----NA-SNVEILDLGFNQFKGKV----S 311 (1017)
Q Consensus 241 l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~~----~ 311 (1017)
+..++ ++|++|+|++|++++..+..+. .. ++|+.|||++|++++.. +
T Consensus 162 l~~~~------------------------~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~ 217 (362)
T 3goz_A 162 LAAIP------------------------ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELA 217 (362)
T ss_dssp HHTSC------------------------TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred HhcCC------------------------ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHH
Confidence 22222 1444444444444433332222 22 35555555555555422 2
Q ss_pred ccccc-cCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccC
Q 043932 312 IDFSS-LKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIP 390 (1017)
Q Consensus 312 ~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~ 390 (1017)
..+.. .++|++|+|++|.++..+.. .+...+..+++|++|+|++|.+.+..+..+.. .+
T Consensus 218 ~~l~~~~~~L~~L~Ls~N~l~~~~~~--~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~------------------l~ 277 (362)
T 3goz_A 218 YIFSSIPNHVVSLNLCLNCLHGPSLE--NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKA------------------LG 277 (362)
T ss_dssp HHHHHSCTTCCEEECCSSCCCCCCHH--HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHH------------------HH
T ss_pred HHHhcCCCCceEEECcCCCCCcHHHH--HHHHHHhcCCCccEEEeccCCccccCHHHHHH------------------HH
Confidence 22222 23555555555555443322 12233445566666666666655433333322 22
Q ss_pred ccccccccccEEeccccCCCCCcc
Q 043932 391 SGIRNLVNLIALGMQSNQLHGTIP 414 (1017)
Q Consensus 391 ~~~~~l~~L~~L~L~~N~l~~~~~ 414 (1017)
..+..+++|+.|++++|++.+..+
T Consensus 278 ~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 278 AAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp TTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHhccCCceEEEecCCCcCCCcch
Confidence 344556666666666666654433
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.1e-24 Score=256.35 Aligned_cols=193 Identities=16% Similarity=0.144 Sum_probs=142.9
Q ss_pred cccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--------chHHHHHHHHHHHHhcCCCCceeeeeeeecCCCC
Q 043932 706 EFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------GAFKSFMAECKALRNIRHRNLIKIITICSSIDSK 777 (1017)
Q Consensus 706 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1017)
.+...++||+|+||+||+|.. .++.+|+|+...... ...+++.+|++++++++||||+++..++...
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--- 411 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL--- 411 (540)
T ss_dssp -----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET---
T ss_pred cCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC---
Confidence 334567999999999999965 467789998653221 1135588999999999999999555444432
Q ss_pred CCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEE
Q 043932 778 GADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHV 857 (1017)
Q Consensus 778 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 857 (1017)
+..|+||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||
T Consensus 412 --~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL 470 (540)
T 3en9_A 412 --DNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYI 470 (540)
T ss_dssp --TTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEE
T ss_pred --CccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEE
Confidence 446999999999999999874 457999999999999999 9999999999999998 9999
Q ss_pred eecccccccccccccccccCCCcccccccCccccCcccccC--CCcCccccchhHHHHHHHHHhCCCCCC
Q 043932 858 GDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG--SEASMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 858 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~pf~ 925 (1017)
+|||+|+........... .........||+.|+|||++.+ ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 471 ~DFGla~~~~~~~~~~~~-~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 471 IDFGLGKISNLDEDKAVD-LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCTTCEECCCHHHHHHH-HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EECccCEECCCccccccc-hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 999999877543211100 0001124679999999999977 568888999999999998888877763
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.5e-25 Score=249.24 Aligned_cols=267 Identities=17% Similarity=0.180 Sum_probs=195.1
Q ss_pred EEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCC----ccccccc-ccccccCCCCcccccCCCcccCC-----Cc
Q 043932 81 RLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIP----QEIGNLL-RLEKLALPNNSFSGTIPTNLSRC-----SN 150 (1017)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~ 150 (1017)
..+|+.|+++|.++..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999998888888889999999999997776 7788888 99999999999998878777775 99
Q ss_pred ceEeecccccccccCccccccc-----CCccEEEeccccccCCCCcccc----C-CCcccEEEEecCCCCCCCCcc----
Q 043932 151 LIQLRVSNNKLEGQIPAEIGSL-----LKLQTLAVGKNYLTGRLPDFVG----N-LSALEVFSITGNSLGGKIPTT---- 216 (1017)
Q Consensus 151 L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~~~~---- 216 (1017)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998887765554 8999999999999977765544 3 369999999999998655444
Q ss_pred ccccc-CcceeEeecCccccccchhhcc----c-CcCcEEeCCCccCccc----cCchhhccCCccceeeecccccCCCC
Q 043932 217 LGLLR-NLVDLHVGGNQFSGTFPQSICN----I-SSLERIYLPFNRFSGT----LPFDIVVNLPNLKSLAIGGNNFFGSI 286 (1017)
Q Consensus 217 l~~l~-~L~~L~L~~n~l~~~~p~~l~~----l-~~L~~L~Ls~N~l~~~----l~~~~~~~l~~L~~L~L~~n~l~~~~ 286 (1017)
+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.+++. ++..+....++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 9999999999999877765544 4 6899999999998742 33332222346777777777776543
Q ss_pred C----CccccCCccceeecccCcccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCccccc
Q 043932 287 P----DSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVG 362 (1017)
Q Consensus 287 p----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 362 (1017)
+ ..+..+++|+.|+|++|.+.+..+..+ ......+..+++|+.|++++|++.+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~-----------------------~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQC-----------------------KALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHH-----------------------HHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHH-----------------------HHHHHHhccCCceEEEecCCCcCCC
Confidence 3 223444555555555555443322211 1122334566667777777777765
Q ss_pred ccchhHHh
Q 043932 363 ELPHSIAN 370 (1017)
Q Consensus 363 ~~p~~~~~ 370 (1017)
..+..+.+
T Consensus 299 ~~~~~~~~ 306 (362)
T 3goz_A 299 SHSIPISN 306 (362)
T ss_dssp GGCHHHHH
T ss_pred cchHHHHH
Confidence 54444433
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.5e-25 Score=255.04 Aligned_cols=258 Identities=16% Similarity=0.212 Sum_probs=179.6
Q ss_pred CCCCccccCCccceeecccCcccceeecc----ccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCccc
Q 043932 285 SIPDSLSNASNVEILDLGFNQFKGKVSID----FSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQF 360 (1017)
Q Consensus 285 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 360 (1017)
.++..+..+++|+.|+|++|++.+..+.. |..+++|++|+|++|.+ |++
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~---------------------------~~l 75 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT---------------------------GRV 75 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCT---------------------------TSC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCccccc---------------------------Ccc
Confidence 45556666777777777777776554332 34444455444444433 234
Q ss_pred ccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCC----Ccchhhcccccccceeccccccccc
Q 043932 361 VGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHG----TIPDVIGELKNLQGLFLYKNVLQGS 436 (1017)
Q Consensus 361 ~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~ 436 (1017)
.+.+|..+..+. ..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++.
T Consensus 76 ~~~~~~~~~~l~------------------~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~ 137 (386)
T 2ca6_A 76 KDEIPEALRLLL------------------QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQ 137 (386)
T ss_dssp GGGSHHHHHHHH------------------HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHH
T ss_pred ccchhHHHHHHH------------------HHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHH
Confidence 445555544332 345566777777777777776 3666777777777788877777644
Q ss_pred cCcccc----cc---------cccceeeccCcccC-CCCc---cccccccCCceeecCCCcccCCccchhhhccccccee
Q 043932 437 IPSGVG----NL---------TKLAKLVMSYNSLQ-GNIP---SSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYL 499 (1017)
Q Consensus 437 ~p~~~~----~l---------~~L~~L~Ls~N~i~-~~~p---~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L 499 (1017)
.+..+. .+ ++|++|+|++|+|+ +.+| ..+..+++|+.|++++|+++.. .+.
T Consensus 138 ~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~---g~~--------- 205 (386)
T 2ca6_A 138 AGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE---GIE--------- 205 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH---HHH---------
T ss_pred HHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh---HHH---------
Confidence 333333 33 78888888888887 3344 4566778888888888877610 000
Q ss_pred ccCCCcCCCCccccccccccceEEEccCCccc----ccccccccccccceEEeccCCccCCC----CCcccc--ccccCc
Q 043932 500 DLSNNNLNGSLPLQIGNLKNLVKLIISSNQFS----GVIPVTLSTCVSLEYLDISSNSFHGV----IPHSLG--FLKSIK 569 (1017)
Q Consensus 500 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~ 569 (1017)
...|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++. +|..+. .+++|+
T Consensus 206 --------~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~ 277 (386)
T 2ca6_A 206 --------HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ 277 (386)
T ss_dssp --------HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCC
T ss_pred --------HHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeE
Confidence 023446778889999999999996 57788899999999999999999876 566663 489999
Q ss_pred EEeccCCcccC----CChhhh-cccCCCcEEEcccCCCcCcCC
Q 043932 570 VLNFSSNNLSG----QIPEFL-ENLSFLEFLNFSHNDLEGEVP 607 (1017)
Q Consensus 570 ~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l~~~~~ 607 (1017)
.|+|++|++++ .+|..+ .++++|+.|++++|++++..+
T Consensus 278 ~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 278 TLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp EEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred EEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999997 488877 668999999999999987554
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.3e-24 Score=233.57 Aligned_cols=203 Identities=16% Similarity=0.156 Sum_probs=140.8
Q ss_pred cceEEEecCCccccccCccc--cccccccEEeccccCCCCCcc----hhhcccccccceeccccccccccCccccccccc
Q 043932 374 SMIEFRIGGNQIFGIIPSGI--RNLVNLIALGMQSNQLHGTIP----DVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKL 447 (1017)
Q Consensus 374 ~L~~L~l~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 447 (1017)
++++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46677777777776676666 777777777777777776443 344567777777777777776666777777777
Q ss_pred ceeeccCcccCCC--C--ccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccc-cccccccceE
Q 043932 448 AKLVMSYNSLQGN--I--PSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPL-QIGNLKNLVK 522 (1017)
Q Consensus 448 ~~L~Ls~N~i~~~--~--p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~-~~~~l~~L~~ 522 (1017)
++|+|++|++.+. + +..+..+++|++|++++|+++ .+|. .+. .+.++++|++
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~----------------------~~~~l~~~l~~L~~ 228 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTG----------------------VCAALAAAGVQPHS 228 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHH----------------------HHHHHHHHTCCCSS
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHH----------------------HHHHHHhcCCCCCE
Confidence 7777777776532 1 122356667777777777665 1111 111 2456778888
Q ss_pred EEccCCccccccccccccc---ccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEccc
Q 043932 523 LIISSNQFSGVIPVTLSTC---VSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSH 599 (1017)
Q Consensus 523 L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 599 (1017)
|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++
T Consensus 229 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 229 LDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp EECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred EECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 8888888887777777666 58888888888888 4566553 7888888888888864 33 56778888888888
Q ss_pred CCCcC
Q 043932 600 NDLEG 604 (1017)
Q Consensus 600 N~l~~ 604 (1017)
|+++.
T Consensus 304 N~l~~ 308 (310)
T 4glp_A 304 NPFLV 308 (310)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 88864
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.1e-23 Score=222.39 Aligned_cols=197 Identities=16% Similarity=0.158 Sum_probs=123.8
Q ss_pred ccceEEEecCCccccccCccccccccccEEeccccC-CCCCcchhhcccccccceeccc-cccccccCccccccccccee
Q 043932 373 SSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQ-LHGTIPDVIGELKNLQGLFLYK-NVLQGSIPSGVGNLTKLAKL 450 (1017)
Q Consensus 373 ~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 450 (1017)
..+++|++++|+++++.+..|.++++|++|++++|+ ++++.+..|.++++|++|++++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 356667777777766666667777777777777775 6655555666667777777766 66665555566666666666
Q ss_pred eccCcccCCCCccccccccCCc---eeecCCC-cccCCccchhhhcccccceeccCCCcCCCCccccccccccce-EEEc
Q 043932 451 VMSYNSLQGNIPSSLGNCQNLI---GFNASHN-KLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLV-KLII 525 (1017)
Q Consensus 451 ~Ls~N~i~~~~p~~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L 525 (1017)
++++|++++ +|. |..+++|+ .|++++| +++ +..+..|.++++|+ .|+|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-------------------------~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-------------------------SIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-------------------------EECTTTTTTTBSSEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchh-------------------------hcCcccccchhcceeEEEc
Confidence 666666664 444 55555555 5555554 443 23334466667777 7777
Q ss_pred cCCcccccccccccccccceEEeccCCc-cCCCCCcccccc-ccCcEEeccCCcccCCChhhhcccCCCcEEEcccC
Q 043932 526 SSNQFSGVIPVTLSTCVSLEYLDISSNS-FHGVIPHSLGFL-KSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHN 600 (1017)
Q Consensus 526 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 600 (1017)
++|+++.+.+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|++++ +|.. .+++|+.|+++++
T Consensus 164 ~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 777776433334444 677777777774 776666667777 777777777777764 3332 4556666666655
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.4e-23 Score=221.57 Aligned_cols=198 Identities=14% Similarity=0.152 Sum_probs=106.0
Q ss_pred CCCEEEccCCCCCCCCCcccccccccccccCCCCc-ccccCCCcccCCCcceEeeccc-ccccccCcccccccCCccEEE
Q 043932 102 FLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNS-FSGTIPTNLSRCSNLIQLRVSN-NKLEGQIPAEIGSLLKLQTLA 179 (1017)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 179 (1017)
+|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777775555566666666666666665 6544444566666666666665 666655445556666666666
Q ss_pred eccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecC-ccccccchhhcccCcCc-EEeCCCccC
Q 043932 180 VGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGN-QFSGTFPQSICNISSLE-RIYLPFNRF 257 (1017)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~-~L~Ls~N~l 257 (1017)
+++|++++ +|+ |+.+++|+ .|++|++++| ++++..+..|..+++|+ +|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 66666554 333 44444444 0014444444 44444444455555555 555555555
Q ss_pred ccccCchhhccCCccceeeecccc-cCCCCCCccccC-CccceeecccCcccceeeccccccCccceEeccc
Q 043932 258 SGTLPFDIVVNLPNLKSLAIGGNN-FFGSIPDSLSNA-SNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQ 327 (1017)
Q Consensus 258 ~~~l~~~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 327 (1017)
+ .+|...+.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|++++
T Consensus 169 ~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 169 T-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp C-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred c-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccC
Confidence 4 444444433 455555555552 543334445555 5555555555555543332 333444444443
No 340
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=8e-25 Score=244.19 Aligned_cols=235 Identities=14% Similarity=0.184 Sum_probs=124.0
Q ss_pred CCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCC--CCCCEEEccCCCCCCCCCcccccccccccccCCCCccccc
Q 043932 63 NLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNL--SFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGT 140 (1017)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 140 (1017)
-|..|.++.|+.. .++.+|++++.+. +..+..+ ++++.|++++|.+++..|.
T Consensus 35 vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~--------------------- 88 (336)
T 2ast_B 35 VCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE--------------------- 88 (336)
T ss_dssp SCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS---------------------
T ss_pred HHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh---------------------
Confidence 3567999988532 3445566555544 2233333 4455555555555443332
Q ss_pred CCCcccCCCcceEeeccccccccc-CcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecC-CCCC-CCCccc
Q 043932 141 IPTNLSRCSNLIQLRVSNNKLEGQ-IPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGN-SLGG-KIPTTL 217 (1017)
Q Consensus 141 ~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~~~~l 217 (1017)
+.++++|++|+|++|.+++. +|..+..+++|++|++++|.+++..+..++.+++|++|++++| .+++ .++..+
T Consensus 89 ----~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~ 164 (336)
T 2ast_B 89 ----HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 164 (336)
T ss_dssp ----CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH
T ss_pred ----hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH
Confidence 33444555555555544433 4444445555555555555544444444455555555555555 3443 134445
Q ss_pred ccccCcceeEeecC-ccccc-cchhhcccC-cCcEEeCCCc--cCc-cccCchhhccCCccceeeecccc-cCCCCCCcc
Q 043932 218 GLLRNLVDLHVGGN-QFSGT-FPQSICNIS-SLERIYLPFN--RFS-GTLPFDIVVNLPNLKSLAIGGNN-FFGSIPDSL 290 (1017)
Q Consensus 218 ~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~l~~~~~~~l~~L~~L~L~~n~-l~~~~p~~l 290 (1017)
..+++|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.++ ..+..+++|++|++++|. +++..+..+
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~-~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS-TLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH-HHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHH-HHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 55666666666666 55543 455566666 6666666666 333 1222 234456666666666666 555555566
Q ss_pred ccCCccceeecccCc-ccceeeccccccCccceEecccC
Q 043932 291 SNASNVEILDLGFNQ-FKGKVSIDFSSLKNLSWLNLEQN 328 (1017)
Q Consensus 291 ~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N 328 (1017)
..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 244 ~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 244 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred hCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 666667777776664 22222224555566666666655
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=7.2e-25 Score=249.37 Aligned_cols=246 Identities=20% Similarity=0.263 Sum_probs=112.9
Q ss_pred CCcccccccccccccCCCCccccc----CCCcccCCCcceEeecccc---cccccCcccc-------cccCCccEEEecc
Q 043932 117 IPQEIGNLLRLEKLALPNNSFSGT----IPTNLSRCSNLIQLRVSNN---KLEGQIPAEI-------GSLLKLQTLAVGK 182 (1017)
Q Consensus 117 ~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~L~~ 182 (1017)
++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 445555555566666666655544 2233455666666666653 3334444433 4455555555555
Q ss_pred ccccC----CCCccccCCCcccEEEEecCCCCCCCCcccc----cc---------cCcceeEeecCccc-cccc---hhh
Q 043932 183 NYLTG----RLPDFVGNLSALEVFSITGNSLGGKIPTTLG----LL---------RNLVDLHVGGNQFS-GTFP---QSI 241 (1017)
Q Consensus 183 n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~----~l---------~~L~~L~L~~n~l~-~~~p---~~l 241 (1017)
|.+++ .+|..+.++++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 55554 2344445555555555555555432222222 22 45555555555554 2223 244
Q ss_pred cccCcCcEEeCCCccCccc----cCchhhccCCccceeeecccccC----CCCCCccccCCccceeecccCcccce----
Q 043932 242 CNISSLERIYLPFNRFSGT----LPFDIVVNLPNLKSLAIGGNNFF----GSIPDSLSNASNVEILDLGFNQFKGK---- 309 (1017)
Q Consensus 242 ~~l~~L~~L~Ls~N~l~~~----l~~~~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~---- 309 (1017)
..+++|++|+|++|+++.. +....+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 4555555555555555411 11112334445555555555543 23444455555555555555555443
Q ss_pred eeccc--cccCccceEecccCcCCCCCCCChhhHhhh-cccCcccEEeccCccccccc
Q 043932 310 VSIDF--SSLKNLSWLNLEQNNLGMGTANDLDFVTFL-TNCSSLKILSLAANQFVGEL 364 (1017)
Q Consensus 310 ~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~ 364 (1017)
++..+ ..+++|++|+|++|.++..+. ..++..+ .++++|++|++++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~--~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAV--RTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHH--HHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHH--HHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 22222 124445555555544432110 0122222 33455555555555554433
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.2e-22 Score=215.80 Aligned_cols=179 Identities=20% Similarity=0.240 Sum_probs=99.8
Q ss_pred ccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCC
Q 043932 399 LIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASH 478 (1017)
Q Consensus 399 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~ 478 (1017)
.+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|+.|++++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 444555555554 2333222 3455555555555555555555555555555555555555555555555555555555
Q ss_pred CcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCC
Q 043932 479 NKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVI 558 (1017)
Q Consensus 479 N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 558 (1017)
|+++ +..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..
T Consensus 93 n~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 93 NQLA-------------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp SCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred Cccc-------------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 5554 122333445555666666666666555555566666666666666666555
Q ss_pred CccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCc
Q 043932 559 PHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGE 605 (1017)
Q Consensus 559 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 605 (1017)
+..|+.+++|++|+|++|++++..|..+..+++|+.|+|++|++++.
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 55566666666666666666655555566666666666666666554
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=230.47 Aligned_cols=223 Identities=16% Similarity=0.159 Sum_probs=120.0
Q ss_pred CCCEEEccCCCCCCCCCc---ccccccccccccCCCCcccccCCCcc--cCCCcceEeecccccccccCc----cccccc
Q 043932 102 FLRYINLSDNSFHGEIPQ---EIGNLLRLEKLALPNNSFSGTIPTNL--SRCSNLIQLRVSNNKLEGQIP----AEIGSL 172 (1017)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p----~~~~~l 172 (1017)
.++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356667766665421100 12234557777777777776666666 666777777777777665444 233456
Q ss_pred CCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCC--C--CcccccccCcceeEeecCccccccch----hhccc
Q 043932 173 LKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGK--I--PTTLGLLRNLVDLHVGGNQFSGTFPQ----SICNI 244 (1017)
Q Consensus 173 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--~~~l~~l~~L~~L~L~~n~l~~~~p~----~l~~l 244 (1017)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++.+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 6666666666666666666666666666666666665431 1 1122455566666666666642 121 23455
Q ss_pred CcCcEEeCCCccCccccCchhhc--cCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccce
Q 043932 245 SSLERIYLPFNRFSGTLPFDIVV--NLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSW 322 (1017)
Q Consensus 245 ~~L~~L~Ls~N~l~~~l~~~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 322 (1017)
++|++|+|++|++++..|..+.. .+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++... +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccE
Confidence 56666666666655444433221 1245555555555555 3444443 455555555555554311 344444444
Q ss_pred EecccCcC
Q 043932 323 LNLEQNNL 330 (1017)
Q Consensus 323 L~L~~N~l 330 (1017)
|+|++|.+
T Consensus 299 L~L~~N~l 306 (310)
T 4glp_A 299 LTLDGNPF 306 (310)
T ss_dssp EECSSTTT
T ss_pred EECcCCCC
Confidence 44444444
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.2e-22 Score=227.26 Aligned_cols=246 Identities=16% Similarity=0.148 Sum_probs=163.9
Q ss_pred cEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCCcc-hhhcccccccc-eec
Q 043932 351 KILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIP-DVIGELKNLQG-LFL 428 (1017)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~L 428 (1017)
++++.++++++ .+|..+ +.++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 46677777777 667644 4568888888888888777888899999999999998866544 56788888765 566
Q ss_pred cccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCC-CcccCCccchhhhcccccceeccCCCcCC
Q 043932 429 YKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASH-NKLTGALPQQLLSITTLSVYLDLSNNNLN 507 (1017)
Q Consensus 429 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~ 507 (1017)
+.|+++...|..|.++++|++|++++|+|+...+..+....++..|++.+ |+++ .+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~--------------------- 145 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIE--------------------- 145 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EEC---------------------
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-ccc---------------------
Confidence 77888877788888888888888888888876666666777777777754 4554 222
Q ss_pred CCcccccccc-ccceEEEccCCcccccccccccccccceEEeccC-CccCCCCCccccccccCcEEeccCCcccCCChhh
Q 043932 508 GSLPLQIGNL-KNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISS-NSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEF 585 (1017)
Q Consensus 508 ~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 585 (1017)
+..|..+ ..++.|+|++|+|+.+.+..| ...+|+.|++++ |+++.+.+++|..+++|++|||++|+|+...+..
T Consensus 146 ---~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 146 ---RNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp ---TTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred ---ccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 2233333 346677777777774433333 445677777764 5666555566777777777777777777443333
Q ss_pred hcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCc
Q 043932 586 LENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGT 630 (1017)
Q Consensus 586 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 630 (1017)
+ .+|+.|.+.++.--..+|....+.+++.+.+. |++.|.+.
T Consensus 222 ~---~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~~~ 262 (350)
T 4ay9_X 222 L---ENLKKLRARSTYNLKKLPTLEKLVALMEASLT-YPSHCCAF 262 (350)
T ss_dssp C---TTCCEEECTTCTTCCCCCCTTTCCSCCEEECS-CHHHHHHH
T ss_pred h---ccchHhhhccCCCcCcCCCchhCcChhhCcCC-CCccccch
Confidence 3 34444544444323345555556666666654 66676543
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.2e-23 Score=244.71 Aligned_cols=208 Identities=24% Similarity=0.325 Sum_probs=147.5
Q ss_pred CCCCCCCCCCC-----ceeeE-EECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccc
Q 043932 55 TSSWNNTINLC-----QWTGV-TCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLE 128 (1017)
Q Consensus 55 ~~sw~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 128 (1017)
+.+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 34675566778 79999 7853 468899999999988 555553 78999999999998 677 4578888
Q ss_pred cccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCC
Q 043932 129 KLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNS 208 (1017)
Q Consensus 129 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 208 (1017)
+|+|++|+|++ +|. +.+ +|++|+|++|++++ +|. .+++|++|+|++|.|++ +|. .+++|+.|+|++|+
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 99999998886 777 665 88888888888886 565 57888888888888886 554 56778888888888
Q ss_pred CCCCCCcccccccCcceeEeecCccccccchhhcccCcC-------cEEeCCCccCccccCchhhccCCccceeeecccc
Q 043932 209 LGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSL-------ERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNN 281 (1017)
Q Consensus 209 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L-------~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~ 281 (1017)
+++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..++. +++|+.|+|++|.
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~-l~~L~~L~L~~N~ 241 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILS-LDPTCTIILEDNP 241 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGG-SCTTEEEECCSSS
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhc-CCCCCEEEeeCCc
Confidence 876 555 55 77777777777777 4555 443 45 66666666665 45554443 5566666666666
Q ss_pred cCCCCCCccccC
Q 043932 282 FFGSIPDSLSNA 293 (1017)
Q Consensus 282 l~~~~p~~l~~l 293 (1017)
+++.+|..+..+
T Consensus 242 l~~~~p~~l~~l 253 (571)
T 3cvr_A 242 LSSRIRESLSQQ 253 (571)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCCcCHHHHHHh
Confidence 655555554443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.9e-22 Score=217.77 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=136.7
Q ss_pred ceEEEecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccC
Q 043932 375 MIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSY 454 (1017)
Q Consensus 375 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (1017)
+++|++++|.++.+ + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|++|++++
T Consensus 43 L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCC
Confidence 44444444444432 2 46667777777777777775444 7777777777777777764 33 567777777777777
Q ss_pred cccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccc
Q 043932 455 NSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVI 534 (1017)
Q Consensus 455 N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 534 (1017)
|++++. +. +..+++|+.|++++|+++ +. +. +..+++|+.|+|++|++++..
T Consensus 117 n~l~~~-~~-l~~l~~L~~L~l~~n~l~-------------------------~~-~~-l~~l~~L~~L~l~~n~l~~~~ 167 (308)
T 1h6u_A 117 TQITDV-TP-LAGLSNLQVLYLDLNQIT-------------------------NI-SP-LAGLTNLQYLSIGNAQVSDLT 167 (308)
T ss_dssp SCCCCC-GG-GTTCTTCCEEECCSSCCC-------------------------CC-GG-GGGCTTCCEEECCSSCCCCCG
T ss_pred CCCCCc-hh-hcCCCCCCEEECCCCccC-------------------------cC-cc-ccCCCCccEEEccCCcCCCCh
Confidence 777743 32 667777777777777665 22 22 667788888888888888654
Q ss_pred cccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcC
Q 043932 535 PVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEV 606 (1017)
Q Consensus 535 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 606 (1017)
+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++.+
T Consensus 168 ~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 168 P--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp G--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred h--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 4 8888888888888888886544 7888888888888888886553 788888888888888887643
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3.9e-22 Score=218.57 Aligned_cols=196 Identities=24% Similarity=0.319 Sum_probs=128.5
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCcc
Q 043932 97 VGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQ 176 (1017)
Q Consensus 97 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 176 (1017)
+.++++|++|++++|.++ .+| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|++++. | .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 345666777777777776 344 566777777777777777643 33 67777777777777777643 2 566777777
Q ss_pred EEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCcc
Q 043932 177 TLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNR 256 (1017)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 256 (1017)
+|++++|++++. + .+.++++|++|++++|.+++..+ ++.+++|++|++++|++++..+ +..+++|++|+|++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 777777777653 2 26677777777777777765433 6667777777777777764333 6667777777777777
Q ss_pred CccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccce
Q 043932 257 FSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGK 309 (1017)
Q Consensus 257 l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 309 (1017)
+++ ++. +..+++|++|+|++|++++.. .+..+++|+.|++++|++++.
T Consensus 185 l~~-~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISD-ISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCC-CGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred cCc-Chh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 763 332 456667777777777776443 266667777777777776643
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=5.4e-22 Score=221.97 Aligned_cols=214 Identities=16% Similarity=0.088 Sum_probs=125.9
Q ss_pred CceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCC-
Q 043932 65 CQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPT- 143 (1017)
Q Consensus 65 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~- 143 (1017)
|+|+.|.|++ ++++.+ |..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt~i-P~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVTEI-PSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCCSC-CTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCCcc-CcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 7788888843 445433 3333 25677888888888743334577777777777777777655553
Q ss_pred cccCCCcceE-eecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEec-CCCCCCCCccccccc
Q 043932 144 NLSRCSNLIQ-LRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITG-NSLGGKIPTTLGLLR 221 (1017)
Q Consensus 144 ~l~~l~~L~~-L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~ 221 (1017)
.|.++++|++ ++++.|+++...|..|.++++|++|++++|++++..+..+....++..|++.+ |.+....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4566766554 55566777766666677777777777777777765555566666666666654 345444444455443
Q ss_pred -CcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCC
Q 043932 222 -NLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNAS 294 (1017)
Q Consensus 222 -~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 294 (1017)
.++.|+|++|+|+. +|.......+|++|++++|...+.+|.+.|.++++|++|+|++|+|+...+..+.++.
T Consensus 154 ~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~ 226 (350)
T 4ay9_X 154 FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLK 226 (350)
T ss_dssp SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCC
T ss_pred hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccch
Confidence 45666666666663 3333333445666666543222255555555556666666666665533333333333
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=2.4e-22 Score=216.31 Aligned_cols=162 Identities=19% Similarity=0.168 Sum_probs=126.1
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc------------------chHHHHHHHHHHHHhcCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK------------------GAFKSFMAECKALRNIRH 761 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 761 (1017)
+......|.+.+.||+|+||.||+|++ .+|+.||+|+++.... .....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 334445677779999999999999999 7899999999864321 12456889999999999
Q ss_pred CCceeeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeec
Q 043932 762 RNLIKIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGD 841 (1017)
Q Consensus 762 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 841 (1017)
| +++.+++.. +..++||||+++|+|.+ +.. .+...++.|++.||+|||+. +|+|||
T Consensus 163 -~-~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~~---giiHrD 218 (282)
T 1zar_A 163 -G-LAVPKVYAW------EGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYHR---GIVHGD 218 (282)
T ss_dssp -T-SSSCCEEEE------ETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred -C-CCcCeEEec------cceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHHC---CCEeCC
Confidence 4 566655432 34699999999999988 421 12346999999999999999 999999
Q ss_pred CCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccC----------CCcCccccchh
Q 043932 842 LKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMG----------SEASMTGDVYS 909 (1017)
Q Consensus 842 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Dvws 909 (1017)
|||+||+++ ++.+||+|||+|+. +..|+|||++.+ ..+...+|+|.
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~---------------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVE---------------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEE---------------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCHHHEEEE-CCcEEEEECCCCeE---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999 99999999999862 445789998754 23455566654
No 350
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3e-23 Score=231.40 Aligned_cols=222 Identities=21% Similarity=0.283 Sum_probs=152.6
Q ss_pred cccccCCCCcccccCCCcccCC--CcceEeecccccccccCcccccccCCccEEEeccccccCC-CCccccCCCcccEEE
Q 043932 127 LEKLALPNNSFSGTIPTNLSRC--SNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGR-LPDFVGNLSALEVFS 203 (1017)
Q Consensus 127 L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~ 203 (1017)
++.|++++|.+. |..+..+ +++++|++++|.+++..+. +..+++|++|++++|.+++. +|..+.++++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455555555554 2334444 6677777777777765554 55678888888888887755 677777888888888
Q ss_pred EecCCCCCCCCcccccccCcceeEeecC-ccccc-cchhhcccCcCcEEeCCCc-cCccccCchhhccCC-ccceeeecc
Q 043932 204 ITGNSLGGKIPTTLGLLRNLVDLHVGGN-QFSGT-FPQSICNISSLERIYLPFN-RFSGTLPFDIVVNLP-NLKSLAIGG 279 (1017)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~l~~~~~~~l~-~L~~L~L~~ 279 (1017)
|++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .+++.-....+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 8888877777777778888888888888 57653 5666777888888888888 776432234456677 888888888
Q ss_pred c--ccC-CCCCCccccCCccceeecccCc-ccceeeccccccCccceEecccCc-CCCCCCCChhhHhhhcccCcccEEe
Q 043932 280 N--NFF-GSIPDSLSNASNVEILDLGFNQ-FKGKVSIDFSSLKNLSWLNLEQNN-LGMGTANDLDFVTFLTNCSSLKILS 354 (1017)
Q Consensus 280 n--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~l~~l~~L~~L~ 354 (1017)
| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.. .....+.++++|+.|+
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~------~~~~~l~~~~~L~~L~ 278 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP------ETLLELGEIPTLKTLQ 278 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG------GGGGGGGGCTTCCEEE
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH------HHHHHHhcCCCCCEEe
Confidence 7 444 3456666777788888888887 666666677777777777777774 211 1112355667777777
Q ss_pred ccCc
Q 043932 355 LAAN 358 (1017)
Q Consensus 355 Ls~N 358 (1017)
+++|
T Consensus 279 l~~~ 282 (336)
T 2ast_B 279 VFGI 282 (336)
T ss_dssp CTTS
T ss_pred ccCc
Confidence 7766
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=9.5e-22 Score=202.55 Aligned_cols=181 Identities=19% Similarity=0.217 Sum_probs=140.4
Q ss_pred CCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCC
Q 043932 63 NLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIP 142 (1017)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 142 (1017)
..|.|.+|.|+. ++++.. |..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++..+
T Consensus 5 C~C~~~~v~c~~------------~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYS------------QGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCS------------SCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecC------------CCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 458999999964 233332 2222 3578888888888886666667888888888888888886656
Q ss_pred CcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccC
Q 043932 143 TNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRN 222 (1017)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 222 (1017)
..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|.++++|+.|++++|.+++..+..+..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 66788888888888888888666667788888888888888888777777888888888888888888777777888888
Q ss_pred cceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchh
Q 043932 223 LVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDI 265 (1017)
Q Consensus 223 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~ 265 (1017)
|++|++++|.+.+ .+++|++|+++.|+++|.+|..+
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~ 185 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSA 185 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTT
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccC
Confidence 8888888887764 35678888888888888888654
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5e-21 Score=197.13 Aligned_cols=181 Identities=20% Similarity=0.220 Sum_probs=153.9
Q ss_pred CEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccc
Q 043932 104 RYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKN 183 (1017)
Q Consensus 104 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1017)
+.+++++++++ .+|..+ .++|++|+|++|++++..+..++++++|++|+|++|++++..+..|.++++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 57888888888 667655 458999999999999766677889999999999999999776777889999999999999
Q ss_pred cccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCc
Q 043932 184 YLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPF 263 (1017)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~ 263 (1017)
++++..+..|+++++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9997777778999999999999999988777778899999999999999987777778889999999999998764
Q ss_pred hhhccCCccceeeecccccCCCCCCccccCCc
Q 043932 264 DIVVNLPNLKSLAIGGNNFFGSIPDSLSNASN 295 (1017)
Q Consensus 264 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 295 (1017)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3457888888889998888888876654
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=4.4e-22 Score=242.99 Aligned_cols=219 Identities=23% Similarity=0.237 Sum_probs=96.5
Q ss_pred CCCHHHHHHHHHHHHhcC-CCCCCCCCCC-CCCCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEcc
Q 043932 32 QTNETDRLALLAIKSQLH-DTSGVTSSWN-NTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLS 109 (1017)
Q Consensus 32 ~~~~~~~~aLl~~k~~~~-~~~~~~~sw~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~ 109 (1017)
+....++++|+++..+.. +....-.+|. .++.++.|.+++++. .+++.|+|.++.+.... .. .|+.++|+
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~-~~-----~l~~l~Ls 199 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEAN-QA-----LLQHKKLS 199 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcch-hh-----HhhcCccC
Confidence 456788999999998874 3333345674 345567899999854 67999999999988742 22 24445555
Q ss_pred CCCCCC---------CCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEe
Q 043932 110 DNSFHG---------EIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAV 180 (1017)
Q Consensus 110 ~n~l~~---------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 180 (1017)
.|.|.+ ..|..+..+..|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|
T Consensus 200 ~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 200 QYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp ----------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEEC
T ss_pred cccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeC
Confidence 554442 34555666666666666666666 56666666666666666666666 56666666666666666
Q ss_pred ccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCc-CcEEeCCCccCcc
Q 043932 181 GKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISS-LERIYLPFNRFSG 259 (1017)
Q Consensus 181 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~ 259 (1017)
++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.++|
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 666666 55666666666666666666664 45555666666666666666666655555544321 1224455555554
Q ss_pred ccC
Q 043932 260 TLP 262 (1017)
Q Consensus 260 ~l~ 262 (1017)
.+|
T Consensus 356 ~~p 358 (727)
T 4b8c_D 356 PLP 358 (727)
T ss_dssp CCC
T ss_pred cCc
Confidence 444
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=9.3e-21 Score=222.46 Aligned_cols=187 Identities=22% Similarity=0.321 Sum_probs=140.2
Q ss_pred CCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEec
Q 043932 102 FLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVG 181 (1017)
Q Consensus 102 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 181 (1017)
+|++|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888888888885 777663 77888888888888 677 457888888888888886 666 665 88888888
Q ss_pred cccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCcccc
Q 043932 182 KNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTL 261 (1017)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l 261 (1017)
+|++++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 888886 555 57888888888888876 554 56788888888888875 565 55 78888888888887 66
Q ss_pred CchhhccCCcc-------ceeeecccccCCCCCCccccCCccceeecccCcccceeecccccc
Q 043932 262 PFDIVVNLPNL-------KSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSL 317 (1017)
Q Consensus 262 ~~~~~~~l~~L-------~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 317 (1017)
|. +. . +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..|..+
T Consensus 196 p~-~~-~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 196 PA-VP-V--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CC-----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hh-HH-H--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 65 32 2 55 77788888777 567777777777777777777777666655543
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7.3e-21 Score=197.24 Aligned_cols=137 Identities=21% Similarity=0.197 Sum_probs=87.6
Q ss_pred cceeeccCcccCCCCc-cccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEc
Q 043932 447 LAKLVMSYNSLQGNIP-SSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLII 525 (1017)
Q Consensus 447 L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 525 (1017)
+++|+|++|+|++..| ..|.++++|+.|++++|+++ +..+..|..+++|++|+|
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-------------------------~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-------------------------DIEEGAFEGASGVNEILL 88 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-------------------------EECTTTTTTCTTCCEEEC
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-------------------------EECHHHhCCCCCCCEEEC
Confidence 3455555555554322 23455555555555555554 223345566666777777
Q ss_pred cCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCc
Q 043932 526 SSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGE 605 (1017)
Q Consensus 526 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 605 (1017)
++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 77777766666677777777777777777766677777777777777777777766677777777777777777777766
Q ss_pred CCC
Q 043932 606 VPT 608 (1017)
Q Consensus 606 ~~~ 608 (1017)
++.
T Consensus 169 c~l 171 (220)
T 2v70_A 169 CYL 171 (220)
T ss_dssp GGG
T ss_pred Cch
Confidence 553
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=3.9e-20 Score=193.17 Aligned_cols=163 Identities=21% Similarity=0.243 Sum_probs=113.6
Q ss_pred CCCCCCCCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCc
Q 043932 57 SWNNTINLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNS 136 (1017)
Q Consensus 57 sw~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 136 (1017)
-|....+.|+|.+|.|+. ++++.. |..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~------------~~l~~i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRS------------KRHASV-PAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTT------------SCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccC------------CCcCcc-CCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 344556899999999953 334332 33332 778888888888887778888888888888888888
Q ss_pred ccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcc
Q 043932 137 FSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTT 216 (1017)
Q Consensus 137 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 216 (1017)
|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+.++++|+.|+|++|++++..+..
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 87555556677888888888888877666666777777777777777777 55666666666666666666666555555
Q ss_pred cccccCcceeEeecCcccc
Q 043932 217 LGLLRNLVDLHVGGNQFSG 235 (1017)
Q Consensus 217 l~~l~~L~~L~L~~n~l~~ 235 (1017)
|..+++|+.|+|++|.+..
T Consensus 155 ~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTTCTTCCEEECTTSCBCT
T ss_pred HhCCCCCCEEEeeCCCccC
Confidence 5566666666666665553
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.4e-20 Score=195.08 Aligned_cols=96 Identities=16% Similarity=0.250 Sum_probs=52.1
Q ss_pred cccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccC
Q 043932 511 PLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLS 590 (1017)
Q Consensus 511 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 590 (1017)
|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..++
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred HHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 34444555555555555555544444455555555555555555555555555555555555555555555555555555
Q ss_pred CCcEEEcccCCCcCcC
Q 043932 591 FLEFLNFSHNDLEGEV 606 (1017)
Q Consensus 591 ~L~~L~l~~N~l~~~~ 606 (1017)
+|+.|+|++|++.+..
T Consensus 153 ~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 153 AIQTMHLAQNPFICDC 168 (220)
T ss_dssp TCCEEECCSSCEECSG
T ss_pred CCCEEEeCCCCcCCCC
Confidence 5555555555555443
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=3e-22 Score=236.79 Aligned_cols=222 Identities=18% Similarity=0.159 Sum_probs=143.3
Q ss_pred ceeeEEECCCCCeEEEEEcCCCCCcc-------------------------ccCc---ccCCCCCCCEEEccCCCCCCCC
Q 043932 66 QWTGVTCGHRHQRVTRLDLSNQRIGG-------------------------ILSP---YVGNLSFLRYINLSDNSFHGEI 117 (1017)
Q Consensus 66 ~w~gv~c~~~~~~v~~l~l~~~~l~~-------------------------~~~~---~l~~l~~L~~L~L~~n~l~~~~ 117 (1017)
.|+++.|.....+|-.+++..-.+.- .... .+..+++|+.|+|++|.++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 57777776666677777776543321 0001 1356777777777777776 67
Q ss_pred CcccccccccccccCCCCc-------------ccccCCCcccCCCcceEee-cccccccccCcccccccCCccEEEeccc
Q 043932 118 PQEIGNLLRLEKLALPNNS-------------FSGTIPTNLSRCSNLIQLR-VSNNKLEGQIPAEIGSLLKLQTLAVGKN 183 (1017)
Q Consensus 118 p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~l~~l~~L~~L~-L~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1017)
|.+++++++|++|++++|. +.+.+|..++++++|+.|+ ++.|.+. +|+.+.+++|
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-----------~L~~l~l~~n 433 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-----------DLRSKFLLEN 433 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-----------hhhhhhhhcc
Confidence 7777777777777776664 3444555555555555555 4444332 2333444455
Q ss_pred cccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCc
Q 043932 184 YLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPF 263 (1017)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~ 263 (1017)
.++...+ ..|+.|+|++|.+++ +|. |+.+++|+.|+|++|+|+ .+|..++.+++|++|+|++|++++ +|
T Consensus 434 ~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp- 502 (567)
T 1dce_A 434 SVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD- 502 (567)
T ss_dssp HHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-
T ss_pred cccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-
Confidence 5543211 246777777777765 454 777777777777777777 667777777777777777777773 55
Q ss_pred hhhccCCccceeeecccccCCCC-CCccccCCccceeecccCcccceee
Q 043932 264 DIVVNLPNLKSLAIGGNNFFGSI-PDSLSNASNVEILDLGFNQFKGKVS 311 (1017)
Q Consensus 264 ~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~~ 311 (1017)
.+..+++|+.|+|++|++++.. |..++.+++|+.|+|++|++++.++
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 4566777777777777777665 7777777777777777777776544
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.3e-19 Score=196.52 Aligned_cols=173 Identities=23% Similarity=0.359 Sum_probs=124.1
Q ss_pred ccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCc
Q 043932 393 IRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLI 472 (1017)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 472 (1017)
+..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +.++++|++|++++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34566677777777777644 2 36667777777777777775433 6777777777777777764 33 366777777
Q ss_pred eeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCC
Q 043932 473 GFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSN 552 (1017)
Q Consensus 473 ~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 552 (1017)
.|++++|++++ + ..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|
T Consensus 116 ~L~L~~n~i~~--------------------------~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 116 SLSLEHNGISD--------------------------I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN 166 (291)
T ss_dssp EEECTTSCCCC--------------------------C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred EEECCCCcCCC--------------------------C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCC
Confidence 77777776651 1 2456677888888888888765 56788888888888888
Q ss_pred ccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcC
Q 043932 553 SFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEG 604 (1017)
Q Consensus 553 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 604 (1017)
++++..| +..+++|+.|+|++|++++ +|. +..+++|+.|++++|+++.
T Consensus 167 ~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 167 QISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred ccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccC
Confidence 8887655 7888888888888888885 443 7788888888888888876
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1.4e-21 Score=230.90 Aligned_cols=192 Identities=19% Similarity=0.147 Sum_probs=154.9
Q ss_pred cccccccEEeccccCCCCCcchhhcccccccceeccccc-------------cccccCcccccccccceee-ccCcccCC
Q 043932 394 RNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNV-------------LQGSIPSGVGNLTKLAKLV-MSYNSLQG 459 (1017)
Q Consensus 394 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~i~~ 459 (1017)
..+++|+.|+|++|+|+ .+|+.++.+++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 55778888888888887 678888888888888887765 4556666777777777777 6666542
Q ss_pred CCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccccccccc
Q 043932 460 NIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLS 539 (1017)
Q Consensus 460 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 539 (1017)
+|..+.+++|.++. +|.. .++.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 ----------~L~~l~l~~n~i~~-l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLK-MEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHH-HHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------hhhhhhhhcccccc-cCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 45556666676662 2211 13569999999986 676 999999999999999999 7788999
Q ss_pred ccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCC-hhhhcccCCCcEEEcccCCCcCcCCCC
Q 043932 540 TCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQI-PEFLENLSFLEFLNFSHNDLEGEVPTK 609 (1017)
Q Consensus 540 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~ 609 (1017)
++++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999999999999997 56 8999999999999999999887 999999999999999999999988764
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=6.9e-20 Score=205.68 Aligned_cols=177 Identities=23% Similarity=0.177 Sum_probs=97.3
Q ss_pred cEEeccccCCCCCcchhhcccccccceeccccccccccCcccc-cccccceeeccCcccCCCCccccccccCCceeecCC
Q 043932 400 IALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVG-NLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASH 478 (1017)
Q Consensus 400 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~ 478 (1017)
+.+++++|+++. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 355556665553 333322 2355566666666655555554 566666666666666655555555666666655555
Q ss_pred CcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCC
Q 043932 479 NKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVI 558 (1017)
Q Consensus 479 N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 558 (1017)
|+|+ +..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 98 N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 NHLH-------------------------TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCC-------------------------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCC-------------------------cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 5554 122334555566666666666666555666666666666666666666544
Q ss_pred Cccc---cccccCcEEeccCCcccCCChhhhcccCCC--cEEEcccCCCcC
Q 043932 559 PHSL---GFLKSIKVLNFSSNNLSGQIPEFLENLSFL--EFLNFSHNDLEG 604 (1017)
Q Consensus 559 p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~l~~N~l~~ 604 (1017)
+..| ..+++|+.|||++|+|++..+..+..++.+ +.|+|++|++.+
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 4444 446666666666666665555555555442 444444444443
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.3e-19 Score=196.68 Aligned_cols=149 Identities=26% Similarity=0.365 Sum_probs=76.3
Q ss_pred CCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccE
Q 043932 98 GNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQT 177 (1017)
Q Consensus 98 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 177 (1017)
..+++|++|++++|.+++ +| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 345556666666665552 22 35555566666666665553322 5555566666666665553 22 2555555555
Q ss_pred EEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccC
Q 043932 178 LAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRF 257 (1017)
Q Consensus 178 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 257 (1017)
|++++|++++. +.+..+++|+.|++++|++++. ..++.+++|++|++++|++++..+ +..+++|++|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 55555555532 3345555555555555555432 344445555555555555543322 44444444444444444
Q ss_pred c
Q 043932 258 S 258 (1017)
Q Consensus 258 ~ 258 (1017)
+
T Consensus 191 ~ 191 (291)
T 1h6t_A 191 S 191 (291)
T ss_dssp C
T ss_pred C
Confidence 4
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.7e-19 Score=212.68 Aligned_cols=198 Identities=21% Similarity=0.302 Sum_probs=136.6
Q ss_pred CCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEecc
Q 043932 103 LRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGK 182 (1017)
Q Consensus 103 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 182 (1017)
+..++|+.+.+++.++ +..|.+|+.|+|++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4445566666664333 466777777777777776 344 47777777777777777775544 77777777777777
Q ss_pred ccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccC
Q 043932 183 NYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLP 262 (1017)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~ 262 (1017)
|.+++ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 97 N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 77774 2 3577777777777777777652 4577777777777777777754 567777777777777777775444
Q ss_pred chhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeecccccc
Q 043932 263 FDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSL 317 (1017)
Q Consensus 263 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 317 (1017)
+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.....+..+
T Consensus 171 ---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 171 ---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp ---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred ---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 56677777777777777753 357777778888888877776544444333
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.3e-19 Score=186.00 Aligned_cols=151 Identities=23% Similarity=0.287 Sum_probs=92.4
Q ss_pred EEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCC-cccccccccccccCCCCcccccCCCcccCCCcceEeecccc
Q 043932 81 RLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIP-QEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNN 159 (1017)
Q Consensus 81 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 159 (1017)
.+++++|.++.+ |..+. +.+++|+|++|.|++..| ..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~i-P~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNKI-PEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcccC-ccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 345556666653 33332 345777777777775544 34666777777777777777655556667777777777777
Q ss_pred cccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccc
Q 043932 160 KLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFS 234 (1017)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 234 (1017)
++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|.++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 766666666666666666666666666655666666666665555555555555555555555555555555544
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.3e-19 Score=213.24 Aligned_cols=166 Identities=21% Similarity=0.311 Sum_probs=80.2
Q ss_pred EEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeeccc
Q 043932 79 VTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSN 158 (1017)
Q Consensus 79 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 158 (1017)
++.|++++|.+... +.+..+++|++|+|++|.+++..| +..+++|++|+|++|.+++ +| .+..+++|++|+|++
T Consensus 45 L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~ 118 (605)
T 1m9s_A 45 IDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEH 118 (605)
T ss_dssp CCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTT
T ss_pred CCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecC
Confidence 44455555555443 234555555555555555553322 4555555555555555542 22 345555555555555
Q ss_pred ccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccc
Q 043932 159 NKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFP 238 (1017)
Q Consensus 159 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 238 (1017)
|++++. ..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|.+++..| +..+++|+.|+|++|+|++.
T Consensus 119 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-- 190 (605)
T 1m9s_A 119 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-- 190 (605)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--
T ss_pred CCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--
Confidence 555432 2344555555555555555433 344455555555555555544333 44455555555555555432
Q ss_pred hhhcccCcCcEEeCCCccCc
Q 043932 239 QSICNISSLERIYLPFNRFS 258 (1017)
Q Consensus 239 ~~l~~l~~L~~L~Ls~N~l~ 258 (1017)
..+..+++|+.|+|++|++.
T Consensus 191 ~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 191 RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GGGTTCTTCSEEECCSEEEE
T ss_pred hHHccCCCCCEEEccCCcCc
Confidence 23444455555555555444
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=6.4e-19 Score=183.90 Aligned_cols=137 Identities=20% Similarity=0.191 Sum_probs=81.7
Q ss_pred cccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEE
Q 043932 445 TKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLI 524 (1017)
Q Consensus 445 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 524 (1017)
++|++|+|++|+|++..|..|.++++|+.|+|++|+++ +..+..|..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-------------------------ALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-------------------------CcChhhcccCCCcCEEE
Confidence 45555555555555555555555555555555555554 11223345556666666
Q ss_pred ccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcC
Q 043932 525 ISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEG 604 (1017)
Q Consensus 525 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 604 (1017)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|++.+
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 6666666555555666666666666666666 455566666666666666666665555556666666666666666665
Q ss_pred cCC
Q 043932 605 EVP 607 (1017)
Q Consensus 605 ~~~ 607 (1017)
.++
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 554
No 367
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.3e-19 Score=183.91 Aligned_cols=155 Identities=23% Similarity=0.297 Sum_probs=89.7
Q ss_pred CceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCc
Q 043932 65 CQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTN 144 (1017)
Q Consensus 65 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 144 (1017)
|.|..|.|. +++++.+ |..+. ++|++|+|++|.|++..+..|..+++|++|+|++|++++..|..
T Consensus 11 C~~~~v~c~------------~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 75 (220)
T 2v9t_B 11 CSNNIVDCR------------GKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75 (220)
T ss_dssp EETTEEECT------------TSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT
T ss_pred ECCCEEEcC------------CCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH
Confidence 667666663 3445443 33332 56777777777776555556666666666666666666555666
Q ss_pred ccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcc
Q 043932 145 LSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLV 224 (1017)
Q Consensus 145 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 224 (1017)
|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCC
Confidence 66666666666666666644444455566666666666666655555555555555555555555544444444444455
Q ss_pred eeEeecCccc
Q 043932 225 DLHVGGNQFS 234 (1017)
Q Consensus 225 ~L~L~~n~l~ 234 (1017)
+|+|++|.+.
T Consensus 156 ~L~L~~N~~~ 165 (220)
T 2v9t_B 156 TMHLAQNPFI 165 (220)
T ss_dssp EEECCSSCEE
T ss_pred EEEeCCCCcC
Confidence 5544444443
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=2.5e-19 Score=201.12 Aligned_cols=150 Identities=19% Similarity=0.194 Sum_probs=85.5
Q ss_pred EEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccc-cccccccccCCCCcccccCCCcccCCCcceEeeccccc
Q 043932 82 LDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIG-NLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNK 160 (1017)
Q Consensus 82 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 160 (1017)
+++++++++.. |..+. +.+++|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 23 l~c~~~~l~~i-P~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLPNV-PQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCSSC-CSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcCcc-CccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 44555666553 33332 3466777777777655555555 66666666666666665555566666666666666666
Q ss_pred ccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCccc---ccccCcceeEeecCccc
Q 043932 161 LEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTL---GLLRNLVDLHVGGNQFS 234 (1017)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l---~~l~~L~~L~L~~n~l~ 234 (1017)
+++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..| ..+++|++|+|++|+|+
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 665555556666666666666666665555555555555555555555554333333 23444444444444444
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=2e-19 Score=191.94 Aligned_cols=172 Identities=23% Similarity=0.350 Sum_probs=132.7
Q ss_pred ccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCcee
Q 043932 395 NLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGF 474 (1017)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 474 (1017)
.+.++..+++++|.+++.. .+..+++|+.|++++|.++ .+| .+..+++|++|+|++|+|++..+ +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5667788888888887544 5778888888888888888 455 68888889999999999886544 8888888888
Q ss_pred ecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCcc
Q 043932 475 NASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSF 554 (1017)
Q Consensus 475 ~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 554 (1017)
++++|++++ + |. +.. ++|+.|+|++|++++. + .+..+++|+.|+|++|++
T Consensus 91 ~L~~N~l~~-l-------------------------~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 91 SVNRNRLKN-L-------------------------NG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp ECCSSCCSC-C-------------------------TT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCC
T ss_pred ECCCCccCC-c-------------------------Cc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcC
Confidence 888888872 2 11 112 6788888888888754 3 578888888888888888
Q ss_pred CCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCCCcCcC
Q 043932 555 HGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHNDLEGEV 606 (1017)
Q Consensus 555 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 606 (1017)
++. | .++.+++|+.|+|++|++++. ..+..+++|+.|++++|++++.+
T Consensus 141 ~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 141 KSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 865 3 578888888888888888865 56778888888888888887653
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.9e-19 Score=219.67 Aligned_cols=189 Identities=24% Similarity=0.279 Sum_probs=103.5
Q ss_pred ecCCccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCC
Q 043932 380 IGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQG 459 (1017)
Q Consensus 380 l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~ 459 (1017)
+..|.+. ..+..|..+.+|+.|+|++|++. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 45666777777777777777777 45555557777777777777777 67777777777777777777777
Q ss_pred CCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccccccccc
Q 043932 460 NIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLS 539 (1017)
Q Consensus 460 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 539 (1017)
.+|..|+++++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~--------------------------~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT--------------------------TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC--------------------------CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC--------------------------ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 56777777777777777777665 4566677888888888888888888887776
Q ss_pred cccc-ceEEeccCCccCCCCCccccccccCcEEeccCC--------cccCCChhhhcccCCCcEEEcccCCCcC
Q 043932 540 TCVS-LEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSN--------NLSGQIPEFLENLSFLEFLNFSHNDLEG 604 (1017)
Q Consensus 540 ~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 604 (1017)
.+.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..+....+++|-+.+
T Consensus 338 ~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 338 EKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCG
T ss_pred hcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 5432 234788888888877754 445666666 3343444444455555555666665543
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=5.4e-19 Score=178.92 Aligned_cols=135 Identities=26% Similarity=0.338 Sum_probs=102.2
Q ss_pred eeccCCCcCCCCccc-cccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCC
Q 043932 498 YLDLSNNNLNGSLPL-QIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSN 576 (1017)
Q Consensus 498 ~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (1017)
+|+|++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 33 ~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 112 (192)
T 1w8a_A 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp EEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 344444444444443 3778888999999999998888888889999999999999999888888888999999999999
Q ss_pred cccCCChhhhcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcCC
Q 043932 577 NLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTDE 632 (1017)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 632 (1017)
+|++.+|..+..+++|++|+|++|++++.++.......+....+.++...|+.|..
T Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 113 QISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 99988888888889999999999999887775322222333345566666766543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.6e-18 Score=174.95 Aligned_cols=154 Identities=18% Similarity=0.201 Sum_probs=99.0
Q ss_pred cccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhhcccccc
Q 043932 418 GELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSV 497 (1017)
Q Consensus 418 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~ 497 (1017)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|+.|++++|+++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~--------------- 101 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVT--------------- 101 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCB---------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccC---------------
Confidence 44556666666666665 344 46666666666666665542 235666666666666666665
Q ss_pred eeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCc-cCCCCCccccccccCcEEeccCC
Q 043932 498 YLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNS-FHGVIPHSLGFLKSIKVLNFSSN 576 (1017)
Q Consensus 498 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N 576 (1017)
+..|..+..+++|++|+|++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|+|++|
T Consensus 102 ----------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 102 ----------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp ----------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTB
T ss_pred ----------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCC
Confidence 2334556667777777777777776667777777777777777776 55 344 5777777777777777
Q ss_pred cccCCChhhhcccCCCcEEEcccCCCcC
Q 043932 577 NLSGQIPEFLENLSFLEFLNFSHNDLEG 604 (1017)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 604 (1017)
++++ ++ .+..+++|+.|++++|++.+
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 7775 33 56777777777777777653
No 373
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.5e-18 Score=184.46 Aligned_cols=138 Identities=21% Similarity=0.183 Sum_probs=107.4
Q ss_pred cccccCcccccCCceEEEEEeCCCcEE--EEEEEeeecCcc------------------------hHHHHHHHHHHHHhc
Q 043932 706 EFASSNMIGQGSFGSVYKGILGEDEMI--VAVKVINLKQKG------------------------AFKSFMAECKALRNI 759 (1017)
Q Consensus 706 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (1017)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+..++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999999667888 999997533111 113578899999999
Q ss_pred CCCCc--eeeeeeeecCCCCCCceeEEEEEeccC-C----CHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHh-h
Q 043932 760 RHRNL--IKIITICSSIDSKGADFKALVFECMKN-G----SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH-H 831 (1017)
Q Consensus 760 ~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~ 831 (1017)
.|+++ ..++++ +..++||||+.+ | +|.++... .++.++..++.|++.||.||| +
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~ 189 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE 189 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH
Confidence 88754 334432 235899999943 3 77776532 123456789999999999999 8
Q ss_pred CCCCCceeecCCCCceEeCCCCCeEEeeccccccc
Q 043932 832 HCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFL 866 (1017)
Q Consensus 832 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 866 (1017)
. +|+||||||+|||++. .++|+|||+|...
T Consensus 190 ~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 190 A---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp S---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred C---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 8 9999999999999988 9999999999754
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.1e-18 Score=183.93 Aligned_cols=172 Identities=19% Similarity=0.285 Sum_probs=95.1
Q ss_pred cccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEE
Q 043932 123 NLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVF 202 (1017)
Q Consensus 123 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 202 (1017)
.+.++..+++++|.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ ++++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 34455555555555552 22 3455555555555555555 233 45555555555555555554333 5555555555
Q ss_pred EEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeeccccc
Q 043932 203 SITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNF 282 (1017)
Q Consensus 203 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l 282 (1017)
+|++|++++. |. +.. ++|++|+|++|++++. ..+..+++|++|+|++|++++ ++ .+..+++|++|+|++|++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~--~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV--MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG--GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch--HHccCCCCCEEECCCCcC
Confidence 5555555542 21 112 5666666666666542 246666666666666666653 33 345566666666666666
Q ss_pred CCCCCCccccCCccceeecccCccccee
Q 043932 283 FGSIPDSLSNASNVEILDLGFNQFKGKV 310 (1017)
Q Consensus 283 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 310 (1017)
++. ..+..+++|+.|++++|++.+..
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred cch--HHhccCCCCCEEeCCCCcccCCc
Confidence 644 45666666777777777666543
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.2e-18 Score=174.28 Aligned_cols=151 Identities=15% Similarity=0.219 Sum_probs=66.8
Q ss_pred ccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEE
Q 043932 124 LLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFS 203 (1017)
Q Consensus 124 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 203 (1017)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++++++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 334444444444443 233 2444444444444444332 112344444444444444444443444444444444444
Q ss_pred EecCCCCCCCCcccccccCcceeEeecCc-cccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeeccccc
Q 043932 204 ITGNSLGGKIPTTLGLLRNLVDLHVGGNQ-FSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNF 282 (1017)
Q Consensus 204 L~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l 282 (1017)
+++|.+++..+..++.+++|++|++++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|++|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT--TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH--HhccCCCCCEEEeeCccc
Confidence 44444444444444444555555555554 33 223 34555555555555555542 22 234455555555555555
Q ss_pred C
Q 043932 283 F 283 (1017)
Q Consensus 283 ~ 283 (1017)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 3
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=9e-18 Score=169.93 Aligned_cols=176 Identities=18% Similarity=0.231 Sum_probs=112.8
Q ss_pred cceeccccccccccCcccccccccceeeccCcccCCCCcc-ccccccCCceeecCCCcccCCccchhhhcccccceeccC
Q 043932 424 QGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPS-SLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLS 502 (1017)
Q Consensus 424 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls 502 (1017)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|+.|++++|+++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~-------------------- 67 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-------------------- 67 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC--------------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC--------------------
Confidence 34555555554 44444332 566666666666644443 3566666666666666655
Q ss_pred CCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCC
Q 043932 503 NNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQI 582 (1017)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 582 (1017)
+..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..|..+++|++|+|++|++++..
T Consensus 68 -----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 68 -----GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp -----CBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred -----CcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 345666777788888888888888777777888888888888888888888888888888888888888888776
Q ss_pred hhh-hcccCCCcEEEcccCCCcCcCCCCCCCCCCCcccccCcccccCCcC
Q 043932 583 PEF-LENLSFLEFLNFSHNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 583 p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
+.. +.. .++...+..+...+..|. .+....-..+..+...|..+.
T Consensus 143 ~l~~~~~--~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 143 HLAWFAE--WLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp GGHHHHH--HHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC-
T ss_pred cchHHHH--HHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCC
Confidence 531 211 122223444555544443 233444445666666676554
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.6e-17 Score=184.02 Aligned_cols=288 Identities=12% Similarity=0.056 Sum_probs=181.6
Q ss_pred cCCccEEEeccccccCCCCccccC-CCcccEEEEecCCCC--CCCCcccccccCcceeEeecCccccccchhhcc-----
Q 043932 172 LLKLQTLAVGKNYLTGRLPDFVGN-LSALEVFSITGNSLG--GKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICN----- 243 (1017)
Q Consensus 172 l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~----- 243 (1017)
+.+|++|.++++- ....-..+.. +++|+.|+|++|++. ...... ++.+..+.+..|.| .+.+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhccccccc
Confidence 6678888887642 2111122333 677888888888876 111111 22244455555532 2345566
Q ss_pred ---cCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcc----cceeeccccc
Q 043932 244 ---ISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQF----KGKVSIDFSS 316 (1017)
Q Consensus 244 ---l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l----~~~~~~~~~~ 316 (1017)
+++|+.|+|+. .++ .++...|.++++|+.|++++|.+....+.+|....++..+.+..+.. ......+|.+
T Consensus 97 ~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred ccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 78888888877 666 67777777778888888887777766667777777777766655322 2233444555
Q ss_pred cCccc-eEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccc
Q 043932 317 LKNLS-WLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRN 395 (1017)
Q Consensus 317 l~~L~-~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~ 395 (1017)
+..|+ .+.+....- .. -.....-....+++.+.+.++- .......+....++|+.+++++|+++.+....|.+
T Consensus 175 ~~~L~~~i~~~~~~~--l~---~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~ 248 (329)
T 3sb4_A 175 GEPLETTIQVGAMGK--LE---DEIMKAGLQPRDINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQ 248 (329)
T ss_dssp SCCCEEEEEECTTCC--HH---HHHHHTTCCGGGCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTT
T ss_pred ccccceeEEecCCCc--HH---HHHhhcccCccccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhC
Confidence 55555 333332110 00 0000011124455566665542 21222233333567888888888888888888888
Q ss_pred cccccEEeccccCCCCCcchhhccccccc-ceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCcee
Q 043932 396 LVNLIALGMQSNQLHGTIPDVIGELKNLQ-GLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGF 474 (1017)
Q Consensus 396 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 474 (1017)
+.+|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.++++.|+++.+.+.+|.++++|+.+
T Consensus 249 ~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 249 KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 888888888887 7767778888888888 888887 6765667788888888888888888887777788888888877
Q ss_pred ec
Q 043932 475 NA 476 (1017)
Q Consensus 475 ~l 476 (1017)
+.
T Consensus 327 y~ 328 (329)
T 3sb4_A 327 YK 328 (329)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.5e-17 Score=168.11 Aligned_cols=108 Identities=26% Similarity=0.335 Sum_probs=82.3
Q ss_pred eccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcc
Q 043932 499 LDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNL 578 (1017)
Q Consensus 499 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 578 (1017)
|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+++.|..|..+++|++|+|++|+|
T Consensus 36 L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l 114 (193)
T 2wfh_A 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 114 (193)
T ss_dssp EECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCC
Confidence 444444443 4566677778888888888888877777788888888888888888887777888888888888888888
Q ss_pred cCCChhhhcccCCCcEEEcccCCCcCcCC
Q 043932 579 SGQIPEFLENLSFLEFLNFSHNDLEGEVP 607 (1017)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 607 (1017)
++..+..|..+++|+.|+|++|++.+...
T Consensus 115 ~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 115 SVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 86666677788888888888888877654
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.4e-17 Score=182.50 Aligned_cols=222 Identities=10% Similarity=0.058 Sum_probs=142.6
Q ss_pred ccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccc----cCCCCCCccccCCc
Q 043932 220 LRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNN----FFGSIPDSLSNASN 295 (1017)
Q Consensus 220 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~----l~~~~p~~l~~l~~ 295 (1017)
+++|+.|+|.+ .++.+.+.+|.++++|+.|+++.|.+. .++...|.+..++..+.+..+. .......+|.++..
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 55555555555 555444555555555666666555555 4555555555555544444321 12222334555555
Q ss_pred cc-eeecccCc-ccceeeccccccCccceEecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcc
Q 043932 296 VE-ILDLGFNQ-FKGKVSIDFSSLKNLSWLNLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSS 373 (1017)
Q Consensus 296 L~-~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 373 (1017)
|+ .+++.... +.......-....+++.+.+.++-. ..++......+++|+.++|++|+++ .+|...+....
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~------~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~ 250 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLD------NADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKK 250 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCC------HHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCT
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeec------HHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCC
Confidence 55 34433221 1111111112345566666665421 1122223334788899999988887 56666555556
Q ss_pred cceEEEecCCccccccCcccccccccc-EEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeec
Q 043932 374 SMIEFRIGGNQIFGIIPSGIRNLVNLI-ALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVM 452 (1017)
Q Consensus 374 ~L~~L~l~~N~i~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 452 (1017)
+|+++++.+| ++.+.+.+|.++.+|+ .+++.+ +++.+.+.+|.++++|+.|++++|.++...+..|.++++|+.++.
T Consensus 251 ~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 251 YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 7999999888 8888899999999999 999998 788788899999999999999999999777889999999999874
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=161.50 Aligned_cols=130 Identities=25% Similarity=0.354 Sum_probs=115.1
Q ss_pred eeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCc
Q 043932 498 YLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNN 577 (1017)
Q Consensus 498 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 577 (1017)
++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+.+|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3566666665 4565543 58999999999999 678899999999999999999999999999999999999999999
Q ss_pred ccCCChhhhcccCCCcEEEcccCCCcCcCCC-CCCCCCCCcccccCcccccCCcC
Q 043932 578 LSGQIPEFLENLSFLEFLNFSHNDLEGEVPT-KGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 578 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
|++..|..|.++++|+.|+|++|++++.++. ...+.+++.+++.+|||.|+|..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 9999999999999999999999999987764 56788999999999999999875
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.9e-16 Score=156.60 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=87.9
Q ss_pred cccceeeccCcccC-CCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEE
Q 043932 445 TKLAKLVMSYNSLQ-GNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKL 523 (1017)
Q Consensus 445 ~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 523 (1017)
++|++|++++|+++ +.+|..+..+++|+.|++++|+++ +. ..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L 76 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-------------------------SV--SNLPKLPKLKKL 76 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-------------------------CC--SSCCCCSSCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-------------------------Ch--hhhccCCCCCEE
Confidence 45666666666665 455555566666666666666655 11 345566677777
Q ss_pred EccCCcccccccccccccccceEEeccCCccCCCCC-ccccccccCcEEeccCCcccCCCh---hhhcccCCCcEEEccc
Q 043932 524 IISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIP-HSLGFLKSIKVLNFSSNNLSGQIP---EFLENLSFLEFLNFSH 599 (1017)
Q Consensus 524 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~ 599 (1017)
+|++|++++.+|..+..+++|+.|+|++|++++..+ ..+..+++|++|+|++|++++..+ ..+..+++|+.|++++
T Consensus 77 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp EEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 777777776666666667777777777777775422 567777777777777777775544 4677777777777777
Q ss_pred CCCcCc
Q 043932 600 NDLEGE 605 (1017)
Q Consensus 600 N~l~~~ 605 (1017)
|.++..
T Consensus 157 n~~~~~ 162 (168)
T 2ell_A 157 REDQEA 162 (168)
T ss_dssp TTSCBC
T ss_pred CChhhc
Confidence 776643
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=158.39 Aligned_cols=133 Identities=20% Similarity=0.161 Sum_probs=72.0
Q ss_pred CCCCEEEccCCCCC-CCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCCccEEE
Q 043932 101 SFLRYINLSDNSFH-GEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLA 179 (1017)
Q Consensus 101 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 179 (1017)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 45555555556666666666555533 4455555555555555555544555454555555555
Q ss_pred eccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccc---hhhcccCcCcEEeCCCcc
Q 043932 180 VGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFP---QSICNISSLERIYLPFNR 256 (1017)
Q Consensus 180 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~Ls~N~ 256 (1017)
+++|.+++.. .+..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.
T Consensus 102 Ls~N~l~~~~-----------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 102 LSGNKLKDIS-----------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp CBSSSCCSSG-----------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred ccCCccCcch-----------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 5555554321 11444555555555555555553333 355556666666666665
Q ss_pred Cc
Q 043932 257 FS 258 (1017)
Q Consensus 257 l~ 258 (1017)
+.
T Consensus 159 ~~ 160 (168)
T 2ell_A 159 DQ 160 (168)
T ss_dssp SC
T ss_pred hh
Confidence 54
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2.6e-16 Score=152.19 Aligned_cols=128 Identities=21% Similarity=0.294 Sum_probs=87.2
Q ss_pred cccceeeccCcccC-CCCccccccccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEE
Q 043932 445 TKLAKLVMSYNSLQ-GNIPSSLGNCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKL 523 (1017)
Q Consensus 445 ~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 523 (1017)
++|+.|++++|+++ +.+|..+..+++|+.|++++|++++ . ..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------~--~~~~~l~~L~~L 69 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-------------------------I--ANLPKLNKLKKL 69 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC-------------------------C--TTCCCCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC-------------------------c--hhhhcCCCCCEE
Confidence 55666666666666 5566666666666666666666651 1 345566777777
Q ss_pred EccCCcccccccccccccccceEEeccCCccCCC-CCccccccccCcEEeccCCcccCCCh---hhhcccCCCcEEEccc
Q 043932 524 IISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGV-IPHSLGFLKSIKVLNFSSNNLSGQIP---EFLENLSFLEFLNFSH 599 (1017)
Q Consensus 524 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~ 599 (1017)
+|++|++++.+|..+..+++|+.|++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 70 ~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7777777766676667777777777777777763 33667777777777777777776555 4677777777777763
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=6.4e-16 Score=154.24 Aligned_cols=111 Identities=21% Similarity=0.258 Sum_probs=88.6
Q ss_pred eeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCc
Q 043932 498 YLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNN 577 (1017)
Q Consensus 498 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 577 (1017)
+|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 32 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 111 (177)
T 2o6r_A 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQ 111 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCc
Confidence 34444444444455567788888999999999887777778888899999999999988877788888899999999999
Q ss_pred ccCCChhhhcccCCCcEEEcccCCCcCcCCC
Q 043932 578 LSGQIPEFLENLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 578 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
+++..+..+..+++|+.|++++|++++.+|.
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 112 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9876666678888899999999988887763
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=6.2e-16 Score=154.35 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=92.0
Q ss_pred CCCceeeEEECCCCCeEEEEEcCCCCCccccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCC
Q 043932 63 NLCQWTGVTCGHRHQRVTRLDLSNQRIGGILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIP 142 (1017)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 142 (1017)
..|+|++|.|+. ++++.. |..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++..+
T Consensus 5 C~C~~~~l~~~~------------~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 5 CSCSGTEIRCNS------------KGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp CEEETTEEECCS------------SCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEeCCCEEEecC------------CCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 347898888853 344433 2222 3678888888888886656667777888888888887775555
Q ss_pred CcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCC
Q 043932 143 TNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGK 212 (1017)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (1017)
..+.++++|++|+|++|++++..+..+..+++|++|++++|++++..+..+.++++|+.|++++|.+.+.
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 5667777777777777777766666667777777777777777755555556666666666666666543
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3.3e-16 Score=151.43 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=52.3
Q ss_pred ccccccCCCCccc-ccCCCcccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEE
Q 043932 126 RLEKLALPNNSFS-GTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSI 204 (1017)
Q Consensus 126 ~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 204 (1017)
+|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|++++|.+++.+|..++++++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444443 33444444444444444444444432 33344444444444444444333333333444444444
Q ss_pred ecCCCCCC-CCcccccccCcceeEeecCccccccc---hhhcccCcCcEEeC
Q 043932 205 TGNSLGGK-IPTTLGLLRNLVDLHVGGNQFSGTFP---QSICNISSLERIYL 252 (1017)
Q Consensus 205 ~~N~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~L 252 (1017)
++|.+++. .+..++.+++|++|++++|++++..+ ..+..+++|++|++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 44444331 12344444444444554454443332 24444444444444
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=2.1e-17 Score=168.34 Aligned_cols=156 Identities=24% Similarity=0.243 Sum_probs=102.4
Q ss_pred hcccccccceeccccccccccCc------ccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhh
Q 043932 417 IGELKNLQGLFLYKNVLQGSIPS------GVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLL 490 (1017)
Q Consensus 417 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 490 (1017)
+....+++.++++.|.+++.+|. .|..+++|++|++++|+|++ +| .+.++++|+.|++++|+++
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-------- 83 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-------- 83 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC--------
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc--------
Confidence 33445555555555555555554 66666777777777777764 45 6666777777777776665
Q ss_pred hcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCC-ccccccccCc
Q 043932 491 SITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIP-HSLGFLKSIK 569 (1017)
Q Consensus 491 ~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 569 (1017)
.+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+
T Consensus 84 ------------------~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 84 ------------------KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp ------------------SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred ------------------cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 234444555677777777777775 34 57777777777777777775432 4677777888
Q ss_pred EEeccCCcccCCChhh----------hcccCCCcEEEcccCCCcC
Q 043932 570 VLNFSSNNLSGQIPEF----------LENLSFLEFLNFSHNDLEG 604 (1017)
Q Consensus 570 ~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~l~~N~l~~ 604 (1017)
+|++++|++++.+|.. +..+++|+.|| +|.++.
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888888877665542 67788888776 566553
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=4.2e-16 Score=170.99 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=98.4
Q ss_pred cccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCc--------------chHHH--------HHHHHHHHHhcCCCC
Q 043932 706 EFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK--------------GAFKS--------FMAECKALRNIRHRN 763 (1017)
Q Consensus 706 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~n 763 (1017)
-|++.+.||+|+||.||+|.+. +|+.||||+++.... ..... ..+|...+.++.+..
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4899999999999999999986 688999999752210 00011 234566666664433
Q ss_pred c--eeeeeeeecCCCCCCceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeec
Q 043932 764 L--IKIITICSSIDSKGADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGD 841 (1017)
Q Consensus 764 i--v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 841 (1017)
+ ...+++ ...++||||++|++|.++... .....++.|++.+|.|||+. ||||||
T Consensus 175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~~---gIVHrD 230 (397)
T 4gyi_A 175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAKH---GLIHGD 230 (397)
T ss_dssp CSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCCCeeeec---------cCceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence 3 222222 223799999999888654321 12356889999999999999 999999
Q ss_pred CCCCceEeCCCC----------CeEEeeccccccc
Q 043932 842 LKPSNVLLDHDM----------VSHVGDFGLAKFL 866 (1017)
Q Consensus 842 lkp~NIll~~~~----------~~kl~DfG~a~~~ 866 (1017)
|||.|||+++++ .+.|+||+.+...
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999998876 3899999987643
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.3e-16 Score=162.38 Aligned_cols=136 Identities=20% Similarity=0.287 Sum_probs=88.6
Q ss_pred cccccccccccCCCCcccccCCC------cccCCCcceEeecccccccccCcccccccCCccEEEeccccccCCCCcccc
Q 043932 121 IGNLLRLEKLALPNNSFSGTIPT------NLSRCSNLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVG 194 (1017)
Q Consensus 121 ~~~l~~L~~L~L~~n~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 194 (1017)
+.....++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44455666666776666666665 66667777777777777764 45 6666777777777777776 4566666
Q ss_pred CCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccc-hhhcccCcCcEEeCCCccCcccc
Q 043932 195 NLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFP-QSICNISSLERIYLPFNRFSGTL 261 (1017)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~l 261 (1017)
.+++|+.|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+.+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 66677777777777764 33 56666777777777777664322 35666666667776666665443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=2e-14 Score=162.18 Aligned_cols=271 Identities=11% Similarity=0.095 Sum_probs=141.6
Q ss_pred cCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceE
Q 043932 244 ISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWL 323 (1017)
Q Consensus 244 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 323 (1017)
+..++.+.+.. .++ .++...|.+. +|+.+.+..+ ++.....+|.+ .+|+.+.+.. .++.+...+|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~-~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVK-SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCC-EECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccC-EehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 35566666654 333 5555555553 5666666554 44344445555 3466666654 4555555555555555555
Q ss_pred ecccCcCCCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEe
Q 043932 324 NLEQNNLGMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALG 403 (1017)
Q Consensus 324 ~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~ 403 (1017)
++.+|++..++... +.. ..|+.+.+.++ ++.+...+|.++.+|+.++
T Consensus 186 ~l~~n~l~~I~~~a-------------------------------F~~-~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~ 232 (401)
T 4fdw_A 186 DLSKTKITKLPAST-------------------------------FVY-AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIE 232 (401)
T ss_dssp ECTTSCCSEECTTT-------------------------------TTT-CCCSEEECCTT-CCEECTTTTTTCTTCCCEE
T ss_pred ecCCCcceEechhh-------------------------------Eee-cccCEEEeCCc-hheehhhHhhCCCCCCEEe
Confidence 55555443332221 111 12333333211 3333444445555555555
Q ss_pred ccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccC
Q 043932 404 MQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTG 483 (1017)
Q Consensus 404 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~ 483 (1017)
+..| ++.+. ..+|.+ .+|+.+.+ .|.++.+.+.+|.+|++|+.+++.+|.+..
T Consensus 233 l~~~-l~~I~------------------------~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~ 285 (401)
T 4fdw_A 233 IPEN-VSTIG------------------------QEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFND 285 (401)
T ss_dssp CCTT-CCEEC------------------------TTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCC
T ss_pred cCCC-ccCcc------------------------cccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccC
Confidence 4432 33233 334444 45555555 233443444556666666666665554430
Q ss_pred CccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCcccc
Q 043932 484 ALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLG 563 (1017)
Q Consensus 484 ~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 563 (1017)
+.+....+..|.++++|+.++|. |.++.+...+|.+|.+|+.++|..| ++.+.+.+|.
T Consensus 286 --------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~ 343 (401)
T 4fdw_A 286 --------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFN 343 (401)
T ss_dssp --------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSS
T ss_pred --------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCC
Confidence 00111223456666777777776 3355555666777777777777444 5555566777
Q ss_pred ccccCcEEeccCCcccCCChhhhcccC-CCcEEEcccCCCc
Q 043932 564 FLKSIKVLNFSSNNLSGQIPEFLENLS-FLEFLNFSHNDLE 603 (1017)
Q Consensus 564 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~ 603 (1017)
++ +|+.+++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 344 ~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 344 NT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 77 777777777766655555666663 5667776665543
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=3.4e-14 Score=160.35 Aligned_cols=270 Identities=9% Similarity=0.066 Sum_probs=147.6
Q ss_pred CCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEEeC
Q 043932 173 LKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERIYL 252 (1017)
Q Consensus 173 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 252 (1017)
..++.+.+.+ .++.+...+|.++ +|+.+.+.+| ++.....+|.+. +|+.+.+.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3444444433 2333334445543 4555555444 433334444442 455555553 444444455555555555555
Q ss_pred CCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcCCC
Q 043932 253 PFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNLGM 332 (1017)
Q Consensus 253 s~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 332 (1017)
+.|+++ .++...|. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. +.+..
T Consensus 188 ~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 188 SKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp TTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred CCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 555555 45555544 355555555432 44344445555555555555543 44444555555 455555552 22332
Q ss_pred CCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCCCC
Q 043932 333 GTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLHGT 412 (1017)
Q Consensus 333 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 412 (1017)
++.. .|.++++|+.+++.+|.+. .+.+..+.+.+|.++++|+.++|. +.++.+
T Consensus 262 I~~~------aF~~c~~L~~l~l~~~~~~--------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I 314 (401)
T 4fdw_A 262 IASR------AFYYCPELAEVTTYGSTFN--------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRIL 314 (401)
T ss_dssp ECTT------TTTTCTTCCEEEEESSCCC--------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEE
T ss_pred EChh------HhhCCCCCCEEEeCCcccc--------------------CCcccEECHHHhhCCccCCeEEeC-CceEEE
Confidence 2222 1344455555555444332 111223556677777788888877 446666
Q ss_pred cchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCcccccccc-CCceeecCCCccc
Q 043932 413 IPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQ-NLIGFNASHNKLT 482 (1017)
Q Consensus 413 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~ls~N~l~ 482 (1017)
...+|.++++|+.++|.+| ++...+.+|.++ +|+.+++++|.+....+..|.+++ ++..|.+..+.+.
T Consensus 315 ~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 315 GQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 6777777788888887554 554556677777 788888888777766666677663 5667766666544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=4.3e-15 Score=147.92 Aligned_cols=133 Identities=19% Similarity=0.216 Sum_probs=96.7
Q ss_pred cccccccceeeccCcccCCCCcccccccc-CCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCcccccccccc
Q 043932 441 VGNLTKLAKLVMSYNSLQGNIPSSLGNCQ-NLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKN 519 (1017)
Q Consensus 441 ~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~ 519 (1017)
+.++++|+.|++++|+++. +|. +..+. +|+.|++++|+++ + + ..+..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~-------------------------~-~-~~l~~l~~ 65 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIR-------------------------K-L-DGFPLLRR 65 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCC-------------------------E-E-CCCCCCSS
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCC-------------------------c-c-cccccCCC
Confidence 4556677777777777763 343 33333 6666666666665 2 2 35667788
Q ss_pred ceEEEccCCcccccccccccccccceEEeccCCccCCCCCc--cccccccCcEEeccCCcccCCChhh----hcccCCCc
Q 043932 520 LVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPH--SLGFLKSIKVLNFSSNNLSGQIPEF----LENLSFLE 593 (1017)
Q Consensus 520 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~ 593 (1017)
|++|+|++|+|++..|..|..+++|+.|+|++|+++. +|. .+..+++|+.|+|++|+++ .+|.. +..+++|+
T Consensus 66 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~ 143 (176)
T 1a9n_A 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVR 143 (176)
T ss_dssp CCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCS
T ss_pred CCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccc
Confidence 8888888888886655556888888888888888864 454 7888888888888888888 45554 78888899
Q ss_pred EEEcccCCCcC
Q 043932 594 FLNFSHNDLEG 604 (1017)
Q Consensus 594 ~L~l~~N~l~~ 604 (1017)
.||+++|....
T Consensus 144 ~Ld~~~n~~~~ 154 (176)
T 1a9n_A 144 VLDFQKVKLKE 154 (176)
T ss_dssp EETTEECCHHH
T ss_pred eeCCCcCCHHH
Confidence 99988888764
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=7.5e-14 Score=158.49 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=45.2
Q ss_pred ccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCC
Q 043932 512 LQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSF 591 (1017)
Q Consensus 512 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 591 (1017)
.+|.++.+|+.++|.++ ++.+-..+|.+|.+|+.+++..| ++.+...+|.++++|+.+++..| ++ .+...|.++++
T Consensus 314 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~ 389 (394)
T 4fs7_A 314 EAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTK 389 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCE
T ss_pred hhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCC
Confidence 34555666666666533 44444556666666666666655 55455566666666666666544 22 23445555555
Q ss_pred CcE
Q 043932 592 LEF 594 (1017)
Q Consensus 592 L~~ 594 (1017)
|+.
T Consensus 390 L~~ 392 (394)
T 4fs7_A 390 FKW 392 (394)
T ss_dssp EEE
T ss_pred CcE
Confidence 554
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=6e-14 Score=159.30 Aligned_cols=333 Identities=12% Similarity=0.083 Sum_probs=161.9
Q ss_pred cccCcccCCCCCCCEEEccCCCCCCCCCcccccccccccccCCCCcccccCCCcccCCCcceEeecccccccccCccccc
Q 043932 91 GILSPYVGNLSFLRYINLSDNSFHGEIPQEIGNLLRLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIG 170 (1017)
Q Consensus 91 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 170 (1017)
.+...+|.++++|+.+.|.. .++..-..+|.++++|+.++|.++ ++..-..+|.++++|+.+.+..+ +......+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 33445667777777777764 355333455666777777777544 44333455666666666655543 2223334444
Q ss_pred ccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccchhhcccCcCcEE
Q 043932 171 SLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQSICNISSLERI 250 (1017)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 250 (1017)
+...+........ ......+|.++++|+.+.+.++. .......|.++.+|+.+.+..+ ++
T Consensus 138 ~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~---------------- 197 (394)
T 4fs7_A 138 GCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK---------------- 197 (394)
T ss_dssp TCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC----------------
T ss_pred cccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce----------------
Confidence 4433222222111 11223345555555555554332 1122334444444444444433 22
Q ss_pred eCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCccceeecccCcccceeeccccccCccceEecccCcC
Q 043932 251 YLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEILDLGFNQFKGKVSIDFSSLKNLSWLNLEQNNL 330 (1017)
Q Consensus 251 ~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 330 (1017)
.++...|.+...|+.+.+..+... +.+......+|+.+.+..+ ++.+....|..+..|+.+.+..+..
T Consensus 198 ---------~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~ 265 (394)
T 4fs7_A 198 ---------IIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL 265 (394)
T ss_dssp ---------EECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC
T ss_pred ---------EeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc
Confidence 333334444444444444333221 1222223334444444322 2333444455555555555544432
Q ss_pred CCCCCCChhhHhhhcccCcccEEeccCcccccccchhHHhhcccceEEEecCCccccccCccccccccccEEeccccCCC
Q 043932 331 GMGTANDLDFVTFLTNCSSLKILSLAANQFVGELPHSIANLSSSMIEFRIGGNQIFGIIPSGIRNLVNLIALGMQSNQLH 410 (1017)
Q Consensus 331 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 410 (1017)
... . ..+..+..++.+....+. ++...+....+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++
T Consensus 266 ~i~-~------~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~ 332 (394)
T 4fs7_A 266 RIG-G------SLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE 332 (394)
T ss_dssp EEC-S------CTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred eee-c------cccccccccceeccCcee----eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc
Confidence 211 1 113344555555444332 22222222334555555433 44455666777777777777543 55
Q ss_pred CCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCcee
Q 043932 411 GTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGF 474 (1017)
Q Consensus 411 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 474 (1017)
.+...+|.++.+|+.+++..| ++.....+|.++++|+.+++..+ ++ .+...|.++++|+.+
T Consensus 333 ~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 333 EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 555666777777777777655 55455566777777777777544 22 234556666666543
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=1.2e-14 Score=143.43 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=86.1
Q ss_pred eccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcc
Q 043932 499 LDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNL 578 (1017)
Q Consensus 499 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 578 (1017)
+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|
T Consensus 14 l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 555555554 3555442 6788888999988888888888888899999999998888788888888999999999998
Q ss_pred cCCChhhhcccCCCcEEEcccCCCcCcCCC
Q 043932 579 SGQIPEFLENLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
++..+..|.++++|+.|+|++|++++.++.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 877777788888899999888888887663
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=2.5e-14 Score=141.66 Aligned_cols=108 Identities=21% Similarity=0.294 Sum_probs=86.3
Q ss_pred eeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCc
Q 043932 498 YLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNN 577 (1017)
Q Consensus 498 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 577 (1017)
.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3555666554 5566553 788888899998888888888888889999999999888777778888889999999998
Q ss_pred ccCCChhhhcccCCCcEEEcccCCCcCcCCC
Q 043932 578 LSGQIPEFLENLSFLEFLNFSHNDLEGEVPT 608 (1017)
Q Consensus 578 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 608 (1017)
|++..+..|..+++|+.|+|++|++.+.++.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 8876666688888888888888888876653
No 397
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.2e-15 Score=145.55 Aligned_cols=135 Identities=19% Similarity=0.194 Sum_probs=73.9
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCccccccc-ccccccCCCCcccccCCCcccCCCcceEeecccccccccCcccccccCC
Q 043932 96 YVGNLSFLRYINLSDNSFHGEIPQEIGNLL-RLEKLALPNNSFSGTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIGSLLK 174 (1017)
Q Consensus 96 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 174 (1017)
.+.++++|++|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|++++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3556666777777777776 3443 44443 666666666666643 45566666666666666666433333455555
Q ss_pred ccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccccccCcceeEeecCccccccch----hhcccCcCcEE
Q 043932 175 LQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGLLRNLVDLHVGGNQFSGTFPQ----SICNISSLERI 250 (1017)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~----~l~~l~~L~~L 250 (1017)
|++|++++|+++ .+|. ...+..+++|++|++++|.++ .+|. .+..+++|++|
T Consensus 90 L~~L~L~~N~i~-~~~~----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGD----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CCEEECCSCCCC-CGGG----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CCEEECCCCcCC-cchh----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 555555555554 2232 014444555555555555554 2333 25556666666
Q ss_pred eCCCccCc
Q 043932 251 YLPFNRFS 258 (1017)
Q Consensus 251 ~Ls~N~l~ 258 (1017)
+++.|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 66665553
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.1e-13 Score=136.68 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=99.0
Q ss_pred cceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcc
Q 043932 519 NLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFS 598 (1017)
Q Consensus 519 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 598 (1017)
..+.|++++|+++. +|..+. ++|+.|+|++|+|+++.|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35789999999994 666553 899999999999999999999999999999999999998888888999999999999
Q ss_pred cCCCcCcCCC-CCCCCCCCcccccCcccccCCc
Q 043932 599 HNDLEGEVPT-KGVFSSKTKLSLQGNVKLCGGT 630 (1017)
Q Consensus 599 ~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 630 (1017)
+|+|++.++. ...+.+++.+++.+|++.|+|+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998875 6678899999999999999976
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2e-13 Score=135.14 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=98.0
Q ss_pred ceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEccc
Q 043932 520 LVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSH 599 (1017)
Q Consensus 520 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 599 (1017)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++.+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 6676664 8999999999999999999999999999999999999987777789999999999999
Q ss_pred CCCcCcCCC-CCCCCCCCcccccCcccccCCc
Q 043932 600 NDLEGEVPT-KGVFSSKTKLSLQGNVKLCGGT 630 (1017)
Q Consensus 600 N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 630 (1017)
|+|++.++. ...+.+++.+++.+|++.|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999987775 6678899999999999999875
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=4.7e-13 Score=149.30 Aligned_cols=130 Identities=22% Similarity=0.241 Sum_probs=102.4
Q ss_pred eccCCC-cCCCCccccccccccceEEEccC-CcccccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCC
Q 043932 499 LDLSNN-NLNGSLPLQIGNLKNLVKLIISS-NQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSN 576 (1017)
Q Consensus 499 L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 576 (1017)
++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++++|..|..+++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 566666 666 4777 88999999999996 9999888889999999999999999999999999999999999999999
Q ss_pred cccCCChhhhcccCCCcEEEcccCCCcCcCCCCC--CCCCCCcccccCcccccCCcC
Q 043932 577 NLSGQIPEFLENLSFLEFLNFSHNDLEGEVPTKG--VFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
+|++..+..+..++ |+.|+|++|+|.+.+.... .+.......+..+...|..+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 99977776676666 9999999999998765321 111122334455667776554
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=3.6e-14 Score=158.59 Aligned_cols=169 Identities=17% Similarity=0.153 Sum_probs=82.8
Q ss_pred cccEEeccccCCCCCcchhhccc-----ccccceeccccccccccCccc-ccccccceeeccCcccCCCCcccc-----c
Q 043932 398 NLIALGMQSNQLHGTIPDVIGEL-----KNLQGLFLYKNVLQGSIPSGV-GNLTKLAKLVMSYNSLQGNIPSSL-----G 466 (1017)
Q Consensus 398 ~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~i~~~~p~~~-----~ 466 (1017)
.|+.|+|++|.++......+... ++|++|+|++|.++......+ ..+++|++|+|++|+|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 45555555555543333333222 455555555555543222222 234455666666665553222222 1
Q ss_pred cccCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCccccc----ccccccccc
Q 043932 467 NCQNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGV----IPVTLSTCV 542 (1017)
Q Consensus 467 ~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~ 542 (1017)
..++|+.|+|++|.|+..-. ..++..+..+++|++|+|++|+|++. ++..+...+
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~---------------------~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGV---------------------AVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHH---------------------HHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred cCCccceeeCCCCCCChHHH---------------------HHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 23455666666665541000 01223344556666777777766532 234455556
Q ss_pred cceEEeccCCccCCC----CCccccccccCcEEeccCCcccCCChhhhc
Q 043932 543 SLEYLDISSNSFHGV----IPHSLGFLKSIKVLNFSSNNLSGQIPEFLE 587 (1017)
Q Consensus 543 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 587 (1017)
+|+.|||++|.|++. ++..+...++|++|||++|.|+..-...+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 666666666666542 223334456666666666666654444443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=2.9e-11 Score=137.11 Aligned_cols=113 Identities=10% Similarity=0.082 Sum_probs=60.2
Q ss_pred cccCcccccccC-CccEEEeccccccCCCCccccCCCcccEEEEecCC---CCCCCCcccccccCcceeEeecCcccccc
Q 043932 162 EGQIPAEIGSLL-KLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNS---LGGKIPTTLGLLRNLVDLHVGGNQFSGTF 237 (1017)
Q Consensus 162 ~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 237 (1017)
+.+...+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.+.+|. ++.....+|..+.+|+.+.+..+ ++...
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~ 129 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEID 129 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEEC
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceeh
Confidence 333345566653 4777777643 554556667777777777776653 33333445555556665555433 33344
Q ss_pred chhhcccCcCcEEeCCCccCccccCchhhccCCccceeeec
Q 043932 238 PQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIG 278 (1017)
Q Consensus 238 p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~ 278 (1017)
..+|..+.+|+.+.+..+- . .++...|....+|+.+.+.
T Consensus 130 ~~aF~~c~~L~~i~lp~~~-~-~I~~~~F~~c~~L~~i~~~ 168 (394)
T 4gt6_A 130 SEAFHHCEELDTVTIPEGV-T-SVADGMFSYCYSLHTVTLP 168 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCEEECC
T ss_pred hhhhhhhccccccccccee-e-eecccceeccccccccccc
Confidence 4455555555555554332 1 3444444445555555544
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.9e-12 Score=141.82 Aligned_cols=109 Identities=21% Similarity=0.148 Sum_probs=97.9
Q ss_pred eEEEccCC-cccccccccccccccceEEeccC-CccCCCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcc
Q 043932 521 VKLIISSN-QFSGVIPVTLSTCVSLEYLDISS-NSFHGVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFS 598 (1017)
Q Consensus 521 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 598 (1017)
..+++++| +|++ +|. +..+++|+.|+|++ |+|+++.|..|+.+++|+.|+|++|+|++.+|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 9994 777 99999999999996 99999988999999999999999999999999999999999999999
Q ss_pred cCCCcCcCCCCCCCCCCCcccccCcccccCCcC
Q 043932 599 HNDLEGEVPTKGVFSSKTKLSLQGNVKLCGGTD 631 (1017)
Q Consensus 599 ~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 631 (1017)
+|+|++.++......+++.+++.+|++.|+|.+
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l 121 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCAL 121 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCcc
Confidence 999998877644334499999999999998764
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=1e-10 Score=132.51 Aligned_cols=152 Identities=9% Similarity=0.034 Sum_probs=78.4
Q ss_pred cccCCC-cceEeecccccccccCcccccccCCccEEEecccc---ccCCCCccccCCCcccEEEEecCCCCCCCCccccc
Q 043932 144 NLSRCS-NLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKNY---LTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLGL 219 (1017)
Q Consensus 144 ~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 219 (1017)
+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++.....+|..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 344442 3555555432 333444455555555555555442 33333455555666655544433 33334455666
Q ss_pred ccCcceeEeecCccccccchhhcccCcCcEEeCCCccCccccCchhhccCCccceeeecccccCCCCCCccccCCcccee
Q 043932 220 LRNLVDLHVGGNQFSGTFPQSICNISSLERIYLPFNRFSGTLPFDIVVNLPNLKSLAIGGNNFFGSIPDSLSNASNVEIL 299 (1017)
Q Consensus 220 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 299 (1017)
+.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ ++ .++...|.+ .+|+.+.+..+-.. ....++....+++..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hcccccccccce-eeeecccceecccccccccccce-ee-Eeccccccc-cceeEEEECCcccc-cccchhhhcccccee
Confidence 777777777544 33355567777778887777654 33 455555533 45666665443222 333444444444444
Q ss_pred ecc
Q 043932 300 DLG 302 (1017)
Q Consensus 300 ~Ls 302 (1017)
...
T Consensus 211 ~~~ 213 (394)
T 4gt6_A 211 TSD 213 (394)
T ss_dssp EEC
T ss_pred ccc
Confidence 433
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=2.8e-13 Score=151.43 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=28.1
Q ss_pred CcccEEEEecCCCCCCCCcccccc-----cCcceeEeecCccccccchhh-cccCcCcEEeCCCccCc
Q 043932 197 SALEVFSITGNSLGGKIPTTLGLL-----RNLVDLHVGGNQFSGTFPQSI-CNISSLERIYLPFNRFS 258 (1017)
Q Consensus 197 ~~L~~L~L~~N~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~ 258 (1017)
+.|+.|+|++|.++......+... ++|++|+|++|.++......+ ..+++|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 345556666665554333333322 355555555555543222222 12344455555555443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=6.7e-11 Score=126.04 Aligned_cols=147 Identities=18% Similarity=0.139 Sum_probs=112.9
Q ss_pred HHHhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCC
Q 043932 700 LSKATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKG 778 (1017)
Q Consensus 700 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 778 (1017)
+......|++....+.|+.+.||++... +..+++|+...........+.+|+++++.+. +..+.++++++...
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~---- 82 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD---- 82 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC----
Confidence 3445567888889999999999999864 5679999987532223346889999999884 67788888887543
Q ss_pred CceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC-------------------------
Q 043932 779 ADFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------------------------- 833 (1017)
Q Consensus 779 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------- 833 (1017)
+..|+||||++|.++.+.+... .+...++.+++++++.||+..
T Consensus 83 -~~~~lv~e~i~G~~l~~~~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 83 -GWSNLLMSEADGVLCSEEYEDE-----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp -TEEEEEEECCSSEEHHHHCCTT-----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred -CceEEEEEecCCeehhhccCCc-----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 5679999999999998763211 123467889999999999810
Q ss_pred -------------------------------CCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 834 -------------------------------QPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 834 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
++.++|+|++|.||++++++.+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667799999775
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=1e-10 Score=129.37 Aligned_cols=207 Identities=12% Similarity=0.088 Sum_probs=103.1
Q ss_pred CCeEEEEEcCCCCCcc-c-------cCcccCCCCCCCEEEccCCCCC---------CCCCcccccccccccccCCCCccc
Q 043932 76 HQRVTRLDLSNQRIGG-I-------LSPYVGNLSFLRYINLSDNSFH---------GEIPQEIGNLLRLEKLALPNNSFS 138 (1017)
Q Consensus 76 ~~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~L~~n~l~ 138 (1017)
..+|+.|.+...+..| . +..++..+++|+.|.+.++... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3467777777665542 1 1334567788888888765432 123333445566666666655211
Q ss_pred ccCCCcccCCCcceEeecccccccccCccccc--ccCCccEEEecc--ccccCCCCccccCCCcccEEEEecCCCCCCCC
Q 043932 139 GTIPTNLSRCSNLIQLRVSNNKLEGQIPAEIG--SLLKLQTLAVGK--NYLTGRLPDFVGNLSALEVFSITGNSLGGKIP 214 (1017)
Q Consensus 139 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 214 (1017)
.++. + .+++|++|+|..|.+.......+. .+++|++|+|+. |...+.. .+. .+.
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~~-----------------~l~ 243 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DMN-----------------VFR 243 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CGG-----------------GTG
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hHH-----------------HHH
Confidence 2222 2 255666666666555433333332 455566655532 1111100 000 000
Q ss_pred ccc--ccccCcceeEeecCccccccchhhc---ccCcCcEEeCCCccCccccCchhh---ccCCccceeeecccccCCCC
Q 043932 215 TTL--GLLRNLVDLHVGGNQFSGTFPQSIC---NISSLERIYLPFNRFSGTLPFDIV---VNLPNLKSLAIGGNNFFGSI 286 (1017)
Q Consensus 215 ~~l--~~l~~L~~L~L~~n~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~l~~~~~---~~l~~L~~L~L~~n~l~~~~ 286 (1017)
..+ ..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.+.+.-+..+. ..+++|+.|+|++|.++...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 111 1346666666666666544333333 356677777777766542211111 34567777777777665433
Q ss_pred CCccccCCccceeecccCc
Q 043932 287 PDSLSNASNVEILDLGFNQ 305 (1017)
Q Consensus 287 p~~l~~l~~L~~L~Ls~N~ 305 (1017)
-..+...- ...++++.++
T Consensus 324 ~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 324 KKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHc-CCEEEecCCc
Confidence 33333211 2457777776
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=9.5e-09 Score=115.73 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=83.8
Q ss_pred CcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccccCCceeecCCCcccCCccchhhh
Q 043932 412 TIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNCQNLIGFNASHNKLTGALPQQLLS 491 (1017)
Q Consensus 412 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 491 (1017)
.....+....+|+.+.+..+ ++......|.+...|+.+.+..+ ++.+-..+|.++.+|+.+.+..+ ++
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~--------- 275 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK--------- 275 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS---------
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce---------
Confidence 33444555566666665443 22244445556666666666554 44344455666666666555432 21
Q ss_pred cccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEeccCCccCCCCCccccccccCcEE
Q 043932 492 ITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVL 571 (1017)
Q Consensus 492 ~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 571 (1017)
......|.++++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+
T Consensus 276 ----------------~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 276 ----------------TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp ----------------EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred ----------------eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 112235666777777777777776555666777777777777644 554555677777777777
Q ss_pred eccCCcccCCChhhhccc
Q 043932 572 NFSSNNLSGQIPEFLENL 589 (1017)
Q Consensus 572 ~Ls~N~l~~~~p~~~~~l 589 (1017)
.+..+ ++.+-..+|.+.
T Consensus 339 ~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 339 SYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCCTT-CCEECTTTTTTS
T ss_pred EECCc-cCEEchhHhhCC
Confidence 76544 443334445443
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.99 E-value=7.1e-10 Score=117.98 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=99.4
Q ss_pred HhhccccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCC--ceeeeeeeecCCCCCC
Q 043932 702 KATSEFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRN--LIKIITICSSIDSKGA 779 (1017)
Q Consensus 702 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~ 779 (1017)
.....|.+..+.+.|..+.||++... +|..+++|+.... ....+.+|+++++.+.+.+ +.+++++....
T Consensus 17 ~~~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~----- 87 (264)
T 1nd4_A 17 ERLFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA----- 87 (264)
T ss_dssp TTTTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----
T ss_pred HhcCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----
Confidence 33445655444456667999999764 6677999997543 2245778999999885434 45577765432
Q ss_pred ceeEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC--------------------------
Q 043932 780 DFKALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC-------------------------- 833 (1017)
Q Consensus 780 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------------------------- 833 (1017)
+..++||||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 88 ~~~~~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1nd4_A 88 GRDWLLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLV 153 (264)
T ss_dssp SCEEEEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCc
Confidence 4579999999998884 211 11 1256778888888888752
Q ss_pred -----------------------------CCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 834 -----------------------------QPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 834 -----------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
+..++|+|++|.||++++++.+.|+|||.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 154 DQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=3.6e-10 Score=124.89 Aligned_cols=161 Identities=11% Similarity=0.147 Sum_probs=106.3
Q ss_pred CcccccccCCccEEEeccccccCCCCccccCCCcccEEEEecCCCCCCCCcccc--cccCcceeEeec--Cccccc----
Q 043932 165 IPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNSLGGKIPTTLG--LLRNLVDLHVGG--NQFSGT---- 236 (1017)
Q Consensus 165 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~--n~l~~~---- 236 (1017)
++..+..+++|+.|.|++|.-. .++. + .+++|+.|+|..|.++......++ .+++|++|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 3344556677777777666311 1222 3 267788888877776544444444 678888888753 221111
Q ss_pred -cchhh--cccCcCcEEeCCCccCccccCchhh--ccCCccceeeecccccCCC----CCCccccCCccceeecccCccc
Q 043932 237 -FPQSI--CNISSLERIYLPFNRFSGTLPFDIV--VNLPNLKSLAIGGNNFFGS----IPDSLSNASNVEILDLGFNQFK 307 (1017)
Q Consensus 237 -~p~~l--~~l~~L~~L~Ls~N~l~~~l~~~~~--~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 307 (1017)
+...+ ..+++|++|+|++|.+.+..+..++ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.|+
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11222 2478999999999999754443333 2578999999999999864 4455567899999999999998
Q ss_pred ceeeccccccCccceEecccCc
Q 043932 308 GKVSIDFSSLKNLSWLNLEQNN 329 (1017)
Q Consensus 308 ~~~~~~~~~l~~L~~L~L~~N~ 329 (1017)
......+...- ...+++++++
T Consensus 321 d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHHHHc-CCEEEecCCc
Confidence 76655555411 4568999887
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.93 E-value=3.8e-08 Score=110.78 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=94.6
Q ss_pred cCccccccccccEEeccccCCCCCcchhhcccccccceeccccccccccCcccccccccceeeccCcccCCCCccccccc
Q 043932 389 IPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYKNVLQGSIPSGVGNLTKLAKLVMSYNSLQGNIPSSLGNC 468 (1017)
Q Consensus 389 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l 468 (1017)
....+....+|+.+.+..+ +..+....|.++.+|+.+.+..+ ++......|.+..+|+.+.+..+ ++......|.++
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3445556666666666544 33355566667777777777655 44455566777777777777544 443445567777
Q ss_pred cCCceeecCCCcccCCccchhhhcccccceeccCCCcCCCCccccccccccceEEEccCCcccccccccccccccceEEe
Q 043932 469 QNLIGFNASHNKLTGALPQQLLSITTLSVYLDLSNNNLNGSLPLQIGNLKNLVKLIISSNQFSGVIPVTLSTCVSLEYLD 548 (1017)
Q Consensus 469 ~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 548 (1017)
++|+.+.+.++.++ ..-..+|.++.+|+.++|..+ ++.+-..+|.+|.+|+.+.
T Consensus 286 ~~L~~i~l~~~~i~-------------------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 286 SNLTKVVMDNSAIE-------------------------TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp TTCCEEEECCTTCC-------------------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccccc-------------------------eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 77877777766655 122345677777888887654 5545566788888888888
Q ss_pred ccCCccCCCCCcccccccc
Q 043932 549 ISSNSFHGVIPHSLGFLKS 567 (1017)
Q Consensus 549 Ls~N~l~~~~p~~~~~l~~ 567 (1017)
+..+ ++.+-..+|.++..
T Consensus 340 ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 340 YPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCTT-CCEECTTTTTTSSC
T ss_pred ECCc-cCEEchhHhhCCCC
Confidence 7654 55555667766543
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.89 E-value=1.1e-11 Score=129.61 Aligned_cols=23 Identities=13% Similarity=0.016 Sum_probs=16.8
Q ss_pred CCceeeEEECCCCCeEEEEEcCC
Q 043932 64 LCQWTGVTCGHRHQRVTRLDLSN 86 (1017)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~l~l~~ 86 (1017)
.|.|.|+.|+....+|+.+-..+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHhcCcEEECCCCCEEEEEEecC
Confidence 37899999987766776655544
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.6e-09 Score=118.04 Aligned_cols=196 Identities=18% Similarity=0.151 Sum_probs=123.5
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCC--ceeeeeeeecCCCCCCceeEEEE
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRN--LIKIITICSSIDSKGADFKALVF 786 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~lv~ 786 (1017)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+... .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4568999999999864 24888986422 33467889999998883 332 3444444322 11123457999
Q ss_pred EeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC---------------------------------
Q 043932 787 ECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC--------------------------------- 833 (1017)
Q Consensus 787 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 833 (1017)
|+++|.++.+... ..++..++..++.|+++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLL--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCcccc--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 9999988865432 14677788888999999999998621
Q ss_pred ----------------------CCCceeecCCCCceEeCC--CCCeEEeecccccccccccccccccCCC---c----cc
Q 043932 834 ----------------------QPPMVHGDLKPSNVLLDH--DMVSHVGDFGLAKFLSSHQLDTASKTSS---S----SI 882 (1017)
Q Consensus 834 ----------------------~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~---~----~~ 882 (1017)
++.++|+|++|.||++++ ++.+.++||+.+..-... .+-...... . ..
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~ 246 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVS 246 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHH
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHH
Confidence 245899999999999998 556889999998754221 111100000 0 00
Q ss_pred ccccCccccC-cccccCCCcCccccchhHHHHHHHHHhCCCCCC
Q 043932 883 GIKGTVGYVA-PEYCMGSEASMTGDVYSFGILLLELFTGRRPTD 925 (1017)
Q Consensus 883 ~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~elltg~~pf~ 925 (1017)
.+....++.. |+.... .....+.|++|.++|.+.+|..+|-
T Consensus 247 ~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 247 KILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0000011112 222211 1223589999999999999998763
No 414
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=6.9e-09 Score=115.89 Aligned_cols=144 Identities=14% Similarity=0.182 Sum_probs=105.0
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEee--ecCc-chHHHHHHHHHHHHhcC--CCCceeeeeeeecCCCCCCceeEE
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVIN--LKQK-GAFKSFMAECKALRNIR--HRNLIKIITICSSIDSKGADFKAL 784 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 784 (1017)
.+.++.|.++.||++... +..+++|+.. .... .....+.+|+.+++.+. +..+.+++.++..... .+..++
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeEE
Confidence 467899999999999875 3468888775 3221 22356788999999996 4567888888754322 245689
Q ss_pred EEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC-------------------------------
Q 043932 785 VFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------------------------------- 833 (1017)
Q Consensus 785 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------- 833 (1017)
||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 119 vme~v~G~~l~~~~--------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS--------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp EEECCCCBCCCCTT--------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCeecCCCc--------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 99999997774311 124677888899999999999999831
Q ss_pred ------------------------CCCceeecCCCCceEeCCCCC--eEEeecccccc
Q 043932 834 ------------------------QPPMVHGDLKPSNVLLDHDMV--SHVGDFGLAKF 865 (1017)
Q Consensus 834 ------------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~ 865 (1017)
++.++|||++|.||+++.++. +.|+||+.+..
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998874
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=1.1e-08 Score=106.92 Aligned_cols=80 Identities=21% Similarity=0.305 Sum_probs=53.9
Q ss_pred cccccceEEEccCCcccc--cccccccccccceEEeccCCccCCCCCccccccc--cCcEEeccCCcccCCCh-------
Q 043932 515 GNLKNLVKLIISSNQFSG--VIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLK--SIKVLNFSSNNLSGQIP------- 583 (1017)
Q Consensus 515 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p------- 583 (1017)
.++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456677778888887776 3345666777777777777777764 3344444 77777777777776554
Q ss_pred hhhcccCCCcEEE
Q 043932 584 EFLENLSFLEFLN 596 (1017)
Q Consensus 584 ~~~~~l~~L~~L~ 596 (1017)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2356677777665
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=3.7e-09 Score=105.45 Aligned_cols=123 Identities=17% Similarity=0.145 Sum_probs=66.1
Q ss_pred ccCcccCCCCCCCEEEccCC-CCCCC----CCcccccccccccccCCCCccccc----CCCcccCCCcceEeeccccccc
Q 043932 92 ILSPYVGNLSFLRYINLSDN-SFHGE----IPQEIGNLLRLEKLALPNNSFSGT----IPTNLSRCSNLIQLRVSNNKLE 162 (1017)
Q Consensus 92 ~~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~ 162 (1017)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455667777888888887 77642 233344445566666666655432 2222333445555555555554
Q ss_pred ccCcccccccCCccEEEeccccccCCCCccccCCCcccEEEE--ecCCCCCC----CCcccccccCcceeEeecCccc
Q 043932 163 GQIPAEIGSLLKLQTLAVGKNYLTGRLPDFVGNLSALEVFSI--TGNSLGGK----IPTTLGLLRNLVDLHVGGNQFS 234 (1017)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L--~~N~l~~~----~~~~l~~l~~L~~L~L~~n~l~ 234 (1017)
..... .+...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~--------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGIL--------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHH--------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH--------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32100 12233444455556666 55555532 2334455577888888888775
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.42 E-value=6.9e-07 Score=97.65 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=99.4
Q ss_pred cccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCC----CCceeeeeeeecCCCCCCce
Q 043932 706 EFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRH----RNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 706 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 781 (1017)
.+...+.++.|....||++ +..+++|+.... .....+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4555678999999999998 345888876422 223568899999988865 233445443 23
Q ss_pred eEEEEEeccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCC---------------------------
Q 043932 782 KALVFECMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQ--------------------------- 834 (1017)
Q Consensus 782 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--------------------------- 834 (1017)
.++||||++|.++.+... ..++..+...++.++++.++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY--------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc--------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 479999999988864332 145667777888888888888885421
Q ss_pred ---------------------------------CCceeecCCCCceEeCCCCCeEEeecccccc
Q 043932 835 ---------------------------------PPMVHGDLKPSNVLLDHDMVSHVGDFGLAKF 865 (1017)
Q Consensus 835 ---------------------------------~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 865 (1017)
+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999876779999998864
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=6.1e-08 Score=96.51 Aligned_cols=113 Identities=10% Similarity=0.180 Sum_probs=52.5
Q ss_pred ccCCCcceEeecccc-ccccc----CcccccccCCccEEEeccccccCC----CCccccCCCcccEEEEecCCCCCC---
Q 043932 145 LSRCSNLIQLRVSNN-KLEGQ----IPAEIGSLLKLQTLAVGKNYLTGR----LPDFVGNLSALEVFSITGNSLGGK--- 212 (1017)
Q Consensus 145 l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--- 212 (1017)
+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...+.|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344455555555555 44321 222333344455555555554321 112233334455555555555432
Q ss_pred -CCcccccccCcceeEe--ecCccccc----cchhhcccCcCcEEeCCCccC
Q 043932 213 -IPTTLGLLRNLVDLHV--GGNQFSGT----FPQSICNISSLERIYLPFNRF 257 (1017)
Q Consensus 213 -~~~~l~~l~~L~~L~L--~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l 257 (1017)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2334444556666666 55666543 223334445555555555555
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=1.6e-06 Score=92.25 Aligned_cols=135 Identities=17% Similarity=0.099 Sum_probs=99.5
Q ss_pred cccccCCc-eEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCCCceeEEEEEec
Q 043932 712 MIGQGSFG-SVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKGADFKALVFECM 789 (1017)
Q Consensus 712 ~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 789 (1017)
.+..|..+ .||+.....++..+++|+-... ....+.+|+..++.+. +--+.++++++... +..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-----~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-----DDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET-----TEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC-----CeEEEEEEee
Confidence 45556665 6999988777788999986532 3456788999998884 44467778777554 5679999999
Q ss_pred cCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 043932 790 KNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------------------------------------ 833 (1017)
Q Consensus 790 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------------ 833 (1017)
+|.++.+...... .....++.+++..++.||+..
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9988887654321 223456777888888888641
Q ss_pred -------------------CCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 834 -------------------QPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 834 -------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
++.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0237999999999999988777899999875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.19 E-value=4.5e-06 Score=90.43 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=92.7
Q ss_pred CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCC---CceeeeeeeecCCCCCCceeEEEEE
Q 043932 711 NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHR---NLIKIITICSSIDSKGADFKALVFE 787 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~e 787 (1017)
+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.++... .+..++|||
T Consensus 25 ~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~----~g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS----DGNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT----TSCEEEEEE
T ss_pred eecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC----CCceEEEEe
Confidence 45788888899998 3458888842 223346788999999999642 355666655321 245689999
Q ss_pred eccCCCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhC-----------------------------------
Q 043932 788 CMKNGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHH----------------------------------- 832 (1017)
Q Consensus 788 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------------------------------- 832 (1017)
|++|.++.+..-. .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 94 KVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp CCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred ccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999888763211 234445555556666666655543
Q ss_pred ----------------------CCCCceeecCCCCceEeCC---CCC-eEEeecccccc
Q 043932 833 ----------------------CQPPMVHGDLKPSNVLLDH---DMV-SHVGDFGLAKF 865 (1017)
Q Consensus 833 ----------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfG~a~~ 865 (1017)
.++.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235699999999999987 455 48999998763
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.18 E-value=3.7e-06 Score=89.89 Aligned_cols=76 Identities=16% Similarity=0.084 Sum_probs=59.0
Q ss_pred ccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCC---CceeeeeeeecCCCCCCceeEEE
Q 043932 709 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHR---NLIKIITICSSIDSKGADFKALV 785 (1017)
Q Consensus 709 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 785 (1017)
..+.|+.|.++.||+++.. +|+.+++|+...........+.+|++.++.+.+. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3567999999999999875 6788999997544333346789999999999765 577777652 24899
Q ss_pred EEeccCCCH
Q 043932 786 FECMKNGSL 794 (1017)
Q Consensus 786 ~e~~~~gsL 794 (1017)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.96 E-value=2.2e-05 Score=86.96 Aligned_cols=76 Identities=8% Similarity=0.081 Sum_probs=54.6
Q ss_pred ccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCC--CceeeeeeeecCCCCCCceeEEEE
Q 043932 709 SSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHR--NLIKIITICSSIDSKGADFKALVF 786 (1017)
Q Consensus 709 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~ 786 (1017)
..+.++.|....+|++.. ++..+++|+.... ..+.+|+.+++.+... .+.+++.++.... +..|+||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 356789999999999986 4778999987422 3578899999888643 3456666654321 4578999
Q ss_pred EeccCCCHH
Q 043932 787 ECMKNGSLE 795 (1017)
Q Consensus 787 e~~~~gsL~ 795 (1017)
||++|.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.94 E-value=1.3e-05 Score=89.03 Aligned_cols=84 Identities=6% Similarity=-0.045 Sum_probs=55.2
Q ss_pred cCcc-cccCCceEEEEEeC--C----CcEEEEEEEeeecC---cchHHHHHHHHHHHHhcC-C--CCceeeeeeeecCCC
Q 043932 710 SNMI-GQGSFGSVYKGILG--E----DEMIVAVKVINLKQ---KGAFKSFMAECKALRNIR-H--RNLIKIITICSSIDS 776 (1017)
Q Consensus 710 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~ 776 (1017)
.+.| +.|....+|++... . ++..+++|+..... ......+.+|+.+++.+. + ..+.+++.++.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998763 1 15678999865432 101245678899888884 3 356777777643311
Q ss_pred CCCceeEEEEEeccCCCHH
Q 043932 777 KGADFKALVFECMKNGSLE 795 (1017)
Q Consensus 777 ~~~~~~~lv~e~~~~gsL~ 795 (1017)
.+..++||||++|.++.
T Consensus 105 --~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TSSCEEEEECCCCBCCC
T ss_pred --cCCceEEEEecCCCChh
Confidence 13457999999886654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.80 E-value=4.5e-05 Score=85.97 Aligned_cols=76 Identities=16% Similarity=0.105 Sum_probs=48.6
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEeeecCc-------chHHHHHHHHHHHHhcCC--C-CceeeeeeeecCCCCCC
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQK-------GAFKSFMAECKALRNIRH--R-NLIKIITICSSIDSKGA 779 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 779 (1017)
.+.+|.|.++.||++....+++.|++|....... ....++..|.++++.+.. + .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~----- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T----- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T-----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C-----
Confidence 4578999999999998765667899998653211 123566789999888732 3 344555432 1
Q ss_pred ceeEEEEEeccCC
Q 043932 780 DFKALVFECMKNG 792 (1017)
Q Consensus 780 ~~~~lv~e~~~~g 792 (1017)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2347999999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.79 E-value=8.9e-06 Score=78.50 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=18.0
Q ss_pred cceEeecccccccccCcccccccCCccEEEeccc
Q 043932 150 NLIQLRVSNNKLEGQIPAEIGSLLKLQTLAVGKN 183 (1017)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 183 (1017)
+|++|||+++.++...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 5666666666555443344445555555555554
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=1.2e-05 Score=77.61 Aligned_cols=84 Identities=11% Similarity=0.139 Sum_probs=46.0
Q ss_pred CCccEEEeccccccCCCCccccCCCcccEEEEecCC-CCCCCCcccccc----cCcceeEeecCc-cccccchhhcccCc
Q 043932 173 LKLQTLAVGKNYLTGRLPDFVGNLSALEVFSITGNS-LGGKIPTTLGLL----RNLVDLHVGGNQ-FSGTFPQSICNISS 246 (1017)
Q Consensus 173 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l----~~L~~L~L~~n~-l~~~~p~~l~~l~~ 246 (1017)
.+|++||++++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. +|...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356677777766665444455666666666666663 443333334432 246666666653 55444444555555
Q ss_pred CcEEeCCCcc
Q 043932 247 LERIYLPFNR 256 (1017)
Q Consensus 247 L~~L~Ls~N~ 256 (1017)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 5555555553
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.52 E-value=0.00031 Score=77.30 Aligned_cols=148 Identities=18% Similarity=0.111 Sum_probs=79.3
Q ss_pred CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCC--CCceeeeeeeecCC-CCCCceeEEEEE
Q 043932 711 NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRH--RNLIKIITICSSID-SKGADFKALVFE 787 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~-~~~~~~~~lv~e 787 (1017)
+.|+.|..+.||++... ++ .+++|+.... ..++..|+.+++.+.. -.+.+++....... ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD-SG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET-TE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC-CC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34666778999999874 34 4899988642 1334456666665531 13344443110000 001245789999
Q ss_pred eccCCCHH-----------HH---HhhC-CCC--c-c----ccccCHHH-------------------------------
Q 043932 788 CMKNGSLE-----------DW---LHQS-NDH--L-E----VCKLTLIQ------------------------------- 814 (1017)
Q Consensus 788 ~~~~gsL~-----------~~---l~~~-~~~--~-~----~~~l~~~~------------------------------- 814 (1017)
|++|.++. .. ++.. ... . . ...-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11 1111 000 0 0 00011211
Q ss_pred HHHHHHHHHHHHHHHhh----------CCCCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 815 RVNIAIDVASAIEYLHH----------HCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 815 ~~~i~~qi~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
...+..++..++++|++ ..+..++|+|+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11122234456667763 124589999999999999888899999999775
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.49 E-value=0.00025 Score=75.92 Aligned_cols=78 Identities=18% Similarity=0.114 Sum_probs=56.1
Q ss_pred cccccCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-C--CCceeeeeeeecCCCCCCcee
Q 043932 706 EFASSNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR-H--RNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 706 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~~~ 782 (1017)
+....+.+|.|..+.||+++.. +|+.|++|+...........+..|++.|+.+. . -.+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3444667899999999999986 78889999876444444456788999998884 2 2345555542 23
Q ss_pred EEEEEeccCCC
Q 043932 783 ALVFECMKNGS 793 (1017)
Q Consensus 783 ~lv~e~~~~gs 793 (1017)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 69999998764
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.28 E-value=0.00096 Score=71.65 Aligned_cols=141 Identities=18% Similarity=0.166 Sum_probs=88.9
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcC---CCCceeeeeeeecCCCCCCceeEEEE
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIR---HRNLIKIITICSSIDSKGADFKALVF 786 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 786 (1017)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+.+++.++... +..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEE
Confidence 45689999999999986 3567889987633 2466888999998883 35677888776443 5679999
Q ss_pred EeccCCCHH--------HH---HhhCCC--Ccc--------------ccccCHHHHH---HHH----------------H
Q 043932 787 ECMKNGSLE--------DW---LHQSND--HLE--------------VCKLTLIQRV---NIA----------------I 820 (1017)
Q Consensus 787 e~~~~gsL~--------~~---l~~~~~--~~~--------------~~~l~~~~~~---~i~----------------~ 820 (1017)
||+++..+. +. ++.... ... ...-+|.+.. ++. .
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 999987542 11 222111 000 0012343221 011 1
Q ss_pred HHHHH-HHHHhh-CCCCCceeecCCCCceEeCCCCCeEEeecc
Q 043932 821 DVASA-IEYLHH-HCQPPMVHGDLKPSNVLLDHDMVSHVGDFG 861 (1017)
Q Consensus 821 qi~~~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 861 (1017)
+++.. ...|.. ..++.++|+|+.+.|++++.++ +.|+|++
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223422 2256899999999999999887 8899984
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=9.2e-05 Score=72.85 Aligned_cols=72 Identities=8% Similarity=0.171 Sum_probs=38.6
Q ss_pred ccccCCccceeecccCcccceeecc----ccccCccceEecccCcC-CCCCCCChhhHhhhcccCcccEEeccCccc
Q 043932 289 SLSNASNVEILDLGFNQFKGKVSID----FSSLKNLSWLNLEQNNL-GMGTANDLDFVTFLTNCSSLKILSLAANQF 360 (1017)
Q Consensus 289 ~l~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~N~l-~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 360 (1017)
.+..-+.|+.|+|++|+|.+..... +..-+.|++|+|++|.. ........++...+...+.|+.|+++.|.+
T Consensus 93 aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 93 LIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3444556666666666666443332 33344566777765433 111112223445566667777777776654
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.15 E-value=0.0012 Score=74.86 Aligned_cols=80 Identities=16% Similarity=0.199 Sum_probs=48.3
Q ss_pred CCCceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCccccCcccccCC---CcCccccchhH
Q 043932 834 QPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTVGYVAPEYCMGS---EASMTGDVYSF 910 (1017)
Q Consensus 834 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dvwsl 910 (1017)
++.++|+|++|.||+++.++ ++++||+.+..-... .+-..... .-...|.+|+..... ......++.+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLG------NLILAFFAQDGHATQENDRKEYKQWILRT 302 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHH------HHHHHHHHGGGGCCSSCCSHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHH------HHHHHHHhcccccccccchHHHHHHHHHH
Confidence 34899999999999998876 999999988753211 11000000 001345666544321 12234556678
Q ss_pred HHHHHHHHhCC
Q 043932 911 GILLLELFTGR 921 (1017)
Q Consensus 911 G~il~elltg~ 921 (1017)
...+|+.+++.
T Consensus 303 ~~~~~~~y~~~ 313 (420)
T 2pyw_A 303 IEQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=0.00011 Score=72.27 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=8.3
Q ss_pred hhcccCcCcEEeCCCcc
Q 043932 240 SICNISSLERIYLPFNR 256 (1017)
Q Consensus 240 ~l~~l~~L~~L~Ls~N~ 256 (1017)
++..-++|+.|+++.|.
T Consensus 152 aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 152 AIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHCSSCCEEECCCCC
T ss_pred HHHhCCCcCeEeccCCC
Confidence 34444555555555444
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.97 E-value=0.0015 Score=70.15 Aligned_cols=71 Identities=8% Similarity=0.046 Sum_probs=43.4
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCc-eeeeeeeecCCCCCCceeEEEEEe
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNL-IKIITICSSIDSKGADFKALVFEC 788 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 788 (1017)
.+.|+.|....+|++ ..+++|+........ ....+|+.+++.+....+ .++++++. +.-++|+||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~-------~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDP-------ATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECT-------TTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEEC-------CCCEEEEee
Confidence 567899999999999 248889876432211 223468888877742222 45555431 123689999
Q ss_pred c-cCCCH
Q 043932 789 M-KNGSL 794 (1017)
Q Consensus 789 ~-~~gsL 794 (1017)
+ +|.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 65444
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.92 E-value=0.0063 Score=66.18 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=90.6
Q ss_pred CCCcCHHHHHHhhccccc-----cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCC--Cc
Q 043932 692 FPTVSYAELSKATSEFAS-----SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHR--NL 764 (1017)
Q Consensus 692 ~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 764 (1017)
+...+.+++......|.+ ...++ |....||++... +|+.+++|+...... ....+..|..+++.+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCee
Confidence 455666666666555543 22456 888899998764 455789999863321 235667788888877422 24
Q ss_pred eeeeeeeecCCC--CCCceeEEEEEeccCCCHH-----HH---------Hhh---CCCCccccccCHHHH----------
Q 043932 765 IKIITICSSIDS--KGADFKALVFECMKNGSLE-----DW---------LHQ---SNDHLEVCKLTLIQR---------- 815 (1017)
Q Consensus 765 v~~~~~~~~~~~--~~~~~~~lv~e~~~~gsL~-----~~---------l~~---~~~~~~~~~l~~~~~---------- 815 (1017)
.+++.. .... ...+..++||||++|.++. .+ ++. ..........++...
T Consensus 85 p~~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence 444443 1100 0124568899999875331 11 111 000000111221110
Q ss_pred ------------HHHHHHHHHHHHHHhh-CCCCCceeecCCCCceEeCCCCCeEEeecccccc
Q 043932 816 ------------VNIAIDVASAIEYLHH-HCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKF 865 (1017)
Q Consensus 816 ------------~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 865 (1017)
...+.+++..++.... ..+..++|+|+++.||+++ + .+.++||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1112222222222211 1234689999999999998 4 899999988753
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.89 E-value=0.0051 Score=66.69 Aligned_cols=168 Identities=14% Similarity=0.117 Sum_probs=88.8
Q ss_pred CCcCHHHHHHhhcccccc-----CcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCC--ce
Q 043932 693 PTVSYAELSKATSEFASS-----NMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRN--LI 765 (1017)
Q Consensus 693 ~~~~~~~~~~~~~~y~~~-----~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 765 (1017)
..++.+++.....+|... +.|+.|....+|++... ++ .+++|+..... ....+..|+.+++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 345666666666666552 34667888999999875 33 58899886421 1244567888887774222 33
Q ss_pred eeeeeeecCC-CCCCceeEEEEEeccCCCHH-----H------H---HhhCCCCcccc------ccCHHHHHH-------
Q 043932 766 KIITICSSID-SKGADFKALVFECMKNGSLE-----D------W---LHQSNDHLEVC------KLTLIQRVN------- 817 (1017)
Q Consensus 766 ~~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~~~~~~~~------~l~~~~~~~------- 817 (1017)
+++....... ....+..++||+|++|..+. . . ++......... ...|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3332110000 00014468999999886431 0 0 11110000000 011211100
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCceeecCCCCceEeCCCCCeEEeeccccc
Q 043932 818 -----IAIDVASAIEYLHHH----CQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAK 864 (1017)
Q Consensus 818 -----i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 864 (1017)
+...+...++++++. .+.+++|+|+.+.||++++++.+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234445555532 23479999999999999887666899999775
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.88 E-value=0.0014 Score=60.13 Aligned_cols=54 Identities=20% Similarity=0.335 Sum_probs=25.3
Q ss_pred EEeccCCccC-CCCCccccccccCcEEeccCCcccCCChhhhcccCCCcEEEcccCC
Q 043932 546 YLDISSNSFH-GVIPHSLGFLKSIKVLNFSSNNLSGQIPEFLENLSFLEFLNFSHND 601 (1017)
Q Consensus 546 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 601 (1017)
.++.+++.|+ ..+|..+ .++|+.|+|++|+|+...+..|..+++|+.|+|++|+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4455555554 1223221 1345555555555554444445555555554444333
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.88 E-value=0.0034 Score=71.29 Aligned_cols=75 Identities=16% Similarity=0.075 Sum_probs=47.9
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCc-eeeeeeeecCCCCCCceeEEEEEe
Q 043932 710 SNMIGQGSFGSVYKGILGEDEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNL-IKIITICSSIDSKGADFKALVFEC 788 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 788 (1017)
.+.|+.|-...+|++.....+..+++|+........ -...+|..+++.+...++ .++++++. + ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-------~--G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT-------N--GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-------T--EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-------C--eEEEEe
Confidence 356888989999999986545789999875332211 112578999988854444 55666542 1 259999
Q ss_pred ccCCCH
Q 043932 789 MKNGSL 794 (1017)
Q Consensus 789 ~~~gsL 794 (1017)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987543
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.83 E-value=0.0077 Score=59.33 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=67.6
Q ss_pred CHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeeccccccccccccc
Q 043932 793 SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLD 872 (1017)
Q Consensus 793 sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 872 (1017)
+|.+.++.... +++++++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~-----PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ-----PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred cHHHHHHHcCC-----CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------
Confidence 89999988764 89999999999999999887622111 1 1223446889999999987753 1110
Q ss_pred ccccCCCcccccccCccccCcccccCCCcCccccchhHHHHHHHHHhCCCC
Q 043932 873 TASKTSSSSIGIKGTVGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRP 923 (1017)
Q Consensus 873 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 923 (1017)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123467888763 3557788999999999999875444
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.78 E-value=0.0025 Score=72.04 Aligned_cols=73 Identities=19% Similarity=0.153 Sum_probs=48.8
Q ss_pred cCcccccCCceEEEEEeCC-------CcEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCCc-eeeeeeeecCCCCCCce
Q 043932 710 SNMIGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFKSFMAECKALRNIRHRNL-IKIITICSSIDSKGADF 781 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 781 (1017)
.+.|+.|....+|++.... ++..+++|+.... .....+.+|..+++.+...++ .++++.+. +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~-------~- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS-------G- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET-------T-
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC-------C-
Confidence 3567888899999998753 2467899988432 112455689999988843333 56666542 1
Q ss_pred eEEEEEeccCCC
Q 043932 782 KALVFECMKNGS 793 (1017)
Q Consensus 782 ~~lv~e~~~~gs 793 (1017)
.+|+||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 38999998643
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.74 E-value=0.0031 Score=69.65 Aligned_cols=145 Identities=10% Similarity=0.104 Sum_probs=82.3
Q ss_pred CcccccCCceEEEEEeCC-------CcEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCCCcee
Q 043932 711 NMIGQGSFGSVYKGILGE-------DEMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKGADFK 782 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1017)
+.+..|....+|++.... +++.|++|+.... ........+|.++++.+. +.-..++++++..
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE--------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---------
Confidence 467778889999998752 3467899986332 223456678999998884 3333566665421
Q ss_pred EEEEEeccCCCHHH--------------HH---hhCCCCcccccc-CHHHHHHHHHHHHH-------------------H
Q 043932 783 ALVFECMKNGSLED--------------WL---HQSNDHLEVCKL-TLIQRVNIAIDVAS-------------------A 825 (1017)
Q Consensus 783 ~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~l-~~~~~~~i~~qi~~-------------------~ 825 (1017)
.+||||++|.++.. .+ +........... -+.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 28999998865431 11 111100011111 23445545444322 1
Q ss_pred HHHHh----hC-CCCCceeecCCCCceEeCCC----CCeEEeecccccc
Q 043932 826 IEYLH----HH-CQPPMVHGDLKPSNVLLDHD----MVSHVGDFGLAKF 865 (1017)
Q Consensus 826 L~~LH----~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~ 865 (1017)
+..|. .. .+..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22322 11 23468999999999999876 7899999998763
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.69 E-value=0.002 Score=59.16 Aligned_cols=57 Identities=14% Similarity=0.246 Sum_probs=39.2
Q ss_pred EEEccCCccc-ccccccccccccceEEeccCCccCCCCCccccccccCcEEeccCCcccC
Q 043932 522 KLIISSNQFS-GVIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSSNNLSG 580 (1017)
Q Consensus 522 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 580 (1017)
.++-+++.|+ ..+|..+. ++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5666666665 23343221 357788888888887777778888888888888887763
No 442
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.67 E-value=0.0089 Score=65.14 Aligned_cols=32 Identities=31% Similarity=0.305 Sum_probs=27.6
Q ss_pred CCCceeecCCCCceEeCCC----CCeEEeecccccc
Q 043932 834 QPPMVHGDLKPSNVLLDHD----MVSHVGDFGLAKF 865 (1017)
Q Consensus 834 ~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~ 865 (1017)
++.++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4489999999999999875 6889999998864
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.99 E-value=0.006 Score=67.61 Aligned_cols=73 Identities=10% Similarity=0.122 Sum_probs=43.2
Q ss_pred CcccccCCceEEEEEeCCC--------cEEEEEEEeeecCcchHHHHHHHHHHHHhcCCCC-ceeeeeeeecCCCCCCce
Q 043932 711 NMIGQGSFGSVYKGILGED--------EMIVAVKVINLKQKGAFKSFMAECKALRNIRHRN-LIKIITICSSIDSKGADF 781 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 781 (1017)
+.++.|....+|++..... +..+++|+...... .......|.++++.+.... +.++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T-------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C-------
Confidence 4678888899999987531 25788998753222 1122357888888874333 34566543 1
Q ss_pred eEEEEEeccCCC
Q 043932 782 KALVFECMKNGS 793 (1017)
Q Consensus 782 ~~lv~e~~~~gs 793 (1017)
-++||||++|.+
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 158999998754
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.90 E-value=0.01 Score=64.70 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=27.8
Q ss_pred CCceeecCCCCceEeCCCCCeEEeecccccc
Q 043932 835 PPMVHGDLKPSNVLLDHDMVSHVGDFGLAKF 865 (1017)
Q Consensus 835 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 865 (1017)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.78 E-value=0.021 Score=63.20 Aligned_cols=145 Identities=12% Similarity=0.088 Sum_probs=81.3
Q ss_pred CcccccCCceEEEEEeCCC-------cEEEEEEEeeecCcc-----------h-------HHHHHHHHHHHHhcC-CCCc
Q 043932 711 NMIGQGSFGSVYKGILGED-------EMIVAVKVINLKQKG-----------A-------FKSFMAECKALRNIR-HRNL 764 (1017)
Q Consensus 711 ~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~ni 764 (1017)
+.|..|-...+|++..... +..|.+++.-..... . .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 4566788889999987531 367888887432111 0 112335888888884 4445
Q ss_pred eeeeeeeecCCCCCCceeEEEEEeccCCCHHH--------------HH---hhCCCCcccccc-CHHHHHHHHHHHH---
Q 043932 765 IKIITICSSIDSKGADFKALVFECMKNGSLED--------------WL---HQSNDHLEVCKL-TLIQRVNIAIDVA--- 823 (1017)
Q Consensus 765 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~l-~~~~~~~i~~qi~--- 823 (1017)
.++++++.. .+|+||++|-+|.. .+ +........... .+..+.++..++.
T Consensus 138 Pkl~~~~~~---------G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~ 208 (401)
T 3f2s_A 138 PKLYGIFPQ---------GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIK 208 (401)
T ss_dssp CCEEEEETT---------EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeCC---------CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 566666421 28999998754421 01 111100111111 1223333333221
Q ss_pred -------------------HHH----HHHhhC-CCCCceeecCCCCceEeCCC------CCeEEeeccccc
Q 043932 824 -------------------SAI----EYLHHH-CQPPMVHGDLKPSNVLLDHD------MVSHVGDFGLAK 864 (1017)
Q Consensus 824 -------------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfG~a~ 864 (1017)
.-+ +++... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 209 FTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 223222 23468999999999999877 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.65 E-value=0.039 Score=61.70 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=47.7
Q ss_pred cCcccccCCceEEEEEeCCC-------cEEEEEEEeeecCcchHHHHHHHHHHHHhcC-CCCceeeeeeeecCCCCCCce
Q 043932 710 SNMIGQGSFGSVYKGILGED-------EMIVAVKVINLKQKGAFKSFMAECKALRNIR-HRNLIKIITICSSIDSKGADF 781 (1017)
Q Consensus 710 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 781 (1017)
.+.+..|-...+|++..... +..|++|+....... .-...+|..+++.+. +.-..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 34677788899999997631 467899986533222 122357888888874 333445554331
Q ss_pred eEEEEEeccCCCH
Q 043932 782 KALVFECMKNGSL 794 (1017)
Q Consensus 782 ~~lv~e~~~~gsL 794 (1017)
-+.||||++|.++
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.21 E-value=0.24 Score=55.15 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=25.3
Q ss_pred CceeecCCCCceEe------CCCCCeEEeecccccc
Q 043932 836 PMVHGDLKPSNVLL------DHDMVSHVGDFGLAKF 865 (1017)
Q Consensus 836 ~ivH~Dlkp~NIll------~~~~~~kl~DfG~a~~ 865 (1017)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999998864
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.32 E-value=6.1 Score=38.98 Aligned_cols=83 Identities=18% Similarity=0.227 Sum_probs=59.4
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHhhCCCCCceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccC
Q 043932 809 KLTLIQRVNIAIDVASAIE-YLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGT 887 (1017)
Q Consensus 809 ~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt 887 (1017)
..+..++++++.+|+.... +++.. +|--+.|+||+++.++.+++.-.|+-..
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~---------------------- 133 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKES---------------------- 133 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTT----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCccc----------------------
Confidence 5688899999999988777 66644 8888999999999999999988876432
Q ss_pred ccccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 888 VGYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 888 ~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
++|.-+ +..-=.-.+=|++..++.++..|+.
T Consensus 134 ---lpP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 134 ---LPPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ---BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred ---CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 233321 1111123466788888888887754
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.28 E-value=2.2 Score=29.84 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhhhhhhhcccC
Q 043932 659 VLCMVLSSCLTIVYARRRRSAR 680 (1017)
Q Consensus 659 ~~~~~l~~~l~~~~~~~~~~~~ 680 (1017)
++++++.....+++.|+|+.++
T Consensus 21 v~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 21 LLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHHHHHHHhhhhHhhc
Confidence 3333344444455555554443
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.84 E-value=0.46 Score=53.80 Aligned_cols=62 Identities=11% Similarity=0.070 Sum_probs=18.1
Q ss_pred cccCcccccCCceEEEEEeCCCcEEEEE------EEeeecC--cchHHHHHHHHHHHHhcCCCCceeeeeeee
Q 043932 708 ASSNMIGQGSFGSVYKGILGEDEMIVAV------KVINLKQ--KGAFKSFMAECKALRNIRHRNLIKIITICS 772 (1017)
Q Consensus 708 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 772 (1017)
.+.+.+| ||.||+|.+.....+||+ |..+... ......+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 999999999765567888 6654322 223356788999999999999999887653
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=71.43 E-value=4.9 Score=39.53 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=61.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCCceeecCCCCceEeCCCCCeEEeecccccccccccccccccCCCcccccccCc
Q 043932 809 KLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGDLKPSNVLLDHDMVSHVGDFGLAKFLSSHQLDTASKTSSSSIGIKGTV 888 (1017)
Q Consensus 809 ~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~ 888 (1017)
..+...+++++.+|+....+++.. +|--+.|+|++++.++.+++.-.|+...+
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l---------------------- 129 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV---------------------- 129 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC----------------------
Confidence 678899999999999988766654 88899999999999999999887764322
Q ss_pred cccCcccccCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 043932 889 GYVAPEYCMGSEASMTGDVYSFGILLLELFTGRRPTDA 926 (1017)
Q Consensus 889 ~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~pf~~ 926 (1017)
+|. ..+...=.-.+=|++..+++++..|+.
T Consensus 130 ---~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 130 ---DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp ---SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred ---CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 222 111111233466888899999988865
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=70.92 E-value=2.5 Score=29.52 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhhhhhhhccc
Q 043932 659 VLCMVLSSCLTIVYARRRRSA 679 (1017)
Q Consensus 659 ~~~~~l~~~l~~~~~~~~~~~ 679 (1017)
++++++.....++|.|||+..
T Consensus 21 vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 21 ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHhheehhhhh
Confidence 333444444445555555443
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=50.11 E-value=12 Score=26.17 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=8.8
Q ss_pred HHHHHHHHhhhhhhhcccC
Q 043932 662 MVLSSCLTIVYARRRRSAR 680 (1017)
Q Consensus 662 ~~l~~~l~~~~~~~~~~~~ 680 (1017)
+++.....+++.|+|+.++
T Consensus 23 v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 23 LVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHhhhhhhhh
Confidence 3334444455555554443
No 454
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=39.47 E-value=3.2e+02 Score=30.55 Aligned_cols=143 Identities=16% Similarity=0.071 Sum_probs=89.7
Q ss_pred cccccCCceEEEEEeCCCcEEEEEEEeeec---Cc-chHHHHHHHHHHHHhcCCCCceeeeeeeecC-------------
Q 043932 712 MIGQGSFGSVYKGILGEDEMIVAVKVINLK---QK-GAFKSFMAECKALRNIRHRNLIKIITICSSI------------- 774 (1017)
Q Consensus 712 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------- 774 (1017)
+++-|--|.|..+..- -+-.++-|+++.. .+ ...+..++.++..+ +|..+-++.+..+..
T Consensus 313 i~APGikGmVM~VFTL-PSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eL 389 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTL-PGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPAL 389 (578)
T ss_dssp EECSSCCCSSEEEEEC-TTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred EECCCCCceEEEEEcC-CCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHH
Confidence 6788999999998876 3456889999733 12 22334444444433 354444443321000
Q ss_pred -----------CCCCCceeEEEEEeccC--CCHHHHHhhCCCCccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeec
Q 043932 775 -----------DSKGADFKALVFECMKN--GSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPMVHGD 841 (1017)
Q Consensus 775 -----------~~~~~~~~~lv~e~~~~--gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 841 (1017)
-...++.+.|=-=|++. -.|.=|+++. +..++...+.+--.|++.|-.. +|.-||
T Consensus 390 L~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~a---------~~~~~~~av~eYG~AIKqLAaA---NIFPGD 457 (578)
T 3eps_A 390 MELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQV---------EGQQLRDAIEEYGNAIRQLAAA---NIFPGD 457 (578)
T ss_dssp HHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHHC---------CTHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred HHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhhC---------CHHHHHHHHHHHHHHHHHHHHh---cCCCcc
Confidence 00001221111111111 1455566543 4567788888999999999998 999999
Q ss_pred CCCCceEeCCCCCeEEeecccccccccc
Q 043932 842 LKPSNVLLDHDMVSHVGDFGLAKFLSSH 869 (1017)
Q Consensus 842 lkp~NIll~~~~~~kl~DfG~a~~~~~~ 869 (1017)
.--.|+=|+..|+|..-|+.-.+.+.+-
T Consensus 458 ML~KNFGVTRhgRVVFYDYDEI~ylTdc 485 (578)
T 3eps_A 458 MLFKNFGVTRHGRVVFYDYDEICYMTEV 485 (578)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEESTTC
T ss_pred cccccCCccccceEEEecccceeeeccc
Confidence 9999999999999999999877766543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.09 E-value=47 Score=28.04 Aligned_cols=42 Identities=5% Similarity=0.018 Sum_probs=19.1
Q ss_pred cccccccccccceEEeccCCccCCCCCccccccccCcEEeccC
Q 043932 533 VIPVTLSTCVSLEYLDISSNSFHGVIPHSLGFLKSIKVLNFSS 575 (1017)
Q Consensus 533 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 575 (1017)
+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344455555555554433 2323344455555555554443
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=34.59 E-value=63 Score=27.22 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=27.3
Q ss_pred ccccccCccccccccccEEeccccCCCCCcchhhcccccccceeccc
Q 043932 384 QIFGIIPSGIRNLVNLIALGMQSNQLHGTIPDVIGELKNLQGLFLYK 430 (1017)
Q Consensus 384 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 430 (1017)
.++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 445555566666666666666554 3435555666666666666544
No 457
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.57 E-value=17 Score=20.26 Aligned_cols=9 Identities=33% Similarity=1.228 Sum_probs=7.1
Q ss_pred CCCceeeEE
Q 043932 63 NLCQWTGVT 71 (1017)
Q Consensus 63 ~~c~w~gv~ 71 (1017)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
Done!