BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043933
MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQ
LDLYRIGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVFSSMTFVKNLLRNRM
GDQWLMIT

High Scoring Gene Products

Symbol, full name Information P value
AT1G19260 protein from Arabidopsis thaliana 4.6e-29
AT3G29765 protein from Arabidopsis thaliana 3.6e-28
AT2G06541 protein from Arabidopsis thaliana 1.1e-24
AT4G09660 protein from Arabidopsis thaliana 2.2e-23
AT3G31402 protein from Arabidopsis thaliana 5.8e-19
AT1G41920 protein from Arabidopsis thaliana 1.3e-13
AT3G29763 protein from Arabidopsis thaliana 3.3e-07
AT3G30235 protein from Arabidopsis thaliana 7.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043933
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2202165 - symbol:AT1G19260 species:3702 "Arabi...   332  4.6e-29   1
TAIR|locus:2829849 - symbol:AT3G29765 species:3702 "Arabi...   319  3.6e-28   1
TAIR|locus:4515102803 - symbol:AT2G06541 species:3702 "Ar...   289  1.1e-24   1
TAIR|locus:2118430 - symbol:AT4G09660 species:3702 "Arabi...   278  2.2e-23   1
TAIR|locus:5019474775 - symbol:AT3G31402 "AT3G31402" spec...   231  5.8e-19   1
TAIR|locus:2033523 - symbol:AT1G41920 "AT1G41920" species...   185  1.3e-13   1
TAIR|locus:2829839 - symbol:AT3G29763 "AT3G29763" species...   126  3.3e-07   1
TAIR|locus:5019474771 - symbol:AT3G30235 "AT3G30235" spec...    95  7.4e-05   1


>TAIR|locus:2202165 [details] [associations]
            symbol:AT1G19260 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699 EMBL:CP002684
            GO:GO:0009506 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
            Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 IPI:IPI00526041
            RefSeq:NP_173360.1 UniGene:At.70426 ProteinModelPortal:F4IE28
            EnsemblPlants:AT1G19260.1 GeneID:838509 KEGG:ath:AT1G19260
            OMA:ATENIAQ Uniprot:F4IE28
        Length = 769

 Score = 332 (121.9 bits), Expect = 4.6e-29, P = 4.6e-29
 Identities = 72/139 (51%), Positives = 95/139 (68%)

Query:     1 MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQ 60
             MQLQE N+RF+E N+ELLIC++ L P D F  FDK  L+RL EFYP DF  ++  +L+ Q
Sbjct:   596 MQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 655

Query:    61 LDLYR--------------IGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVF 106
             L++Y               +G+LAR MV T+K   +PLVY+L+ ++LILPVA ATVER F
Sbjct:   656 LEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCF 715

Query:   107 SSMTFVKNLLRNRMGDQWL 125
             S+M FVK  LRNR+GD +L
Sbjct:   716 SAMNFVKTTLRNRIGDMFL 734


>TAIR|locus:2829849 [details] [associations]
            symbol:AT3G29765 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
            EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
            IPI:IPI00538238 RefSeq:NP_189621.1 UniGene:At.65186
            ProteinModelPortal:Q3E6V3 EnsemblPlants:AT3G29765.1 GeneID:822666
            KEGG:ath:AT3G29765 TAIR:At3g29765 HOGENOM:HOG000238438
            InParanoid:Q3E6V3 OMA:WKEQMAV PhylomeDB:Q3E6V3
            Genevestigator:Q3E6V3 Uniprot:Q3E6V3
        Length = 536

 Score = 319 (117.4 bits), Expect = 3.6e-28, P = 3.6e-28
 Identities = 71/139 (51%), Positives = 92/139 (66%)

Query:     1 MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQ 60
             MQLQE N+ F+E N+ELLIC++ L P D F  FDK  L+RL EFYP DF  ++  +L+ Q
Sbjct:   363 MQLQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 422

Query:    61 LDLY--------------RIGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVF 106
             L++Y               +G+LAR MV T+K   +PLVY+L+ L+LILPVA ATV R F
Sbjct:   423 LEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCF 482

Query:   107 SSMTFVKNLLRNRMGDQWL 125
             S+M FVK  LRNR GD +L
Sbjct:   483 SAMNFVKTTLRNRFGDVFL 501


>TAIR|locus:4515102803 [details] [associations]
            symbol:AT2G06541 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
            Pfam:PF05699 EMBL:CP002685 GO:GO:0003676 SUPFAM:SSF53098
            InterPro:IPR025398 Pfam:PF14291 InterPro:IPR006580 SMART:SM00597
            IPI:IPI00938992 RefSeq:NP_001154499.1 UniGene:At.53572
            UniGene:At.69256 ProteinModelPortal:F4IJB0
            EnsemblPlants:AT2G06541.1 GeneID:6240332 KEGG:ath:AT2G06541
            OMA:YDESKES Uniprot:F4IJB0
        Length = 592

 Score = 289 (106.8 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 67/137 (48%), Positives = 88/137 (64%)

Query:     3 LQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQLD 62
             L E N+ F+E NTELL C+A L P DLF  FD+ K++RL EFYP+DF  +D  +LE QL 
Sbjct:   422 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 481

Query:    63 LY--------------RIGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVFSS 108
             LY               +G+LAR M+ T+K   +P VY+L+ + L LP+A ATVER FS+
Sbjct:   482 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 541

Query:   109 MTFVKNLLRNRMGDQWL 125
              T VK  LRNR+ DQ+L
Sbjct:   542 -TVVKTTLRNRISDQFL 557


>TAIR|locus:2118430 [details] [associations]
            symbol:AT4G09660 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0003676 SUPFAM:SSF53098
            EMBL:AL161515 EMBL:AL049482 InterPro:IPR025398 Pfam:PF14291
            eggNOG:NOG67438 InterPro:IPR006580 SMART:SM00597
            HOGENOM:HOG000238438 IPI:IPI00537787 PIR:T04013 RefSeq:NP_192704.1
            UniGene:At.54235 ProteinModelPortal:Q9SZ82
            EnsemblPlants:AT4G09660.1 GeneID:826552 KEGG:ath:AT4G09660
            TAIR:At4g09660 InParanoid:Q9SZ82 OMA:QANDANL PhylomeDB:Q9SZ82
            ProtClustDB:CLSN2682451 Genevestigator:Q9SZ82 Uniprot:Q9SZ82
        Length = 664

 Score = 278 (102.9 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 62/123 (50%), Positives = 82/123 (66%)

Query:     1 MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQ 60
             MQLQE N+RF+E N+ELLIC++ L P D F  FDK  L+RL EFYP +F  ++  +L+ Q
Sbjct:   540 MQLQEFNDRFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPDEFSFVERRSLDHQ 599

Query:    61 LDLYR--------------IGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVF 106
             L++Y                G+LAR MV T+K   +PLVY+L+ L+LILPVA ATVER F
Sbjct:   600 LEIYLDNVKNDERFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVERCF 659

Query:   107 SSM 109
             S+M
Sbjct:   660 SAM 662


>TAIR|locus:5019474775 [details] [associations]
            symbol:AT3G31402 "AT3G31402" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
            SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00938621
            RefSeq:NP_001154657.1 UniGene:At.74659 ProteinModelPortal:F4J921
            EnsemblPlants:AT3G31402.1 GeneID:7922520 KEGG:ath:AT3G31402
            OMA:EAMESKE Uniprot:F4J921
        Length = 393

 Score = 231 (86.4 bits), Expect = 5.8e-19, P = 5.8e-19
 Identities = 55/136 (40%), Positives = 81/136 (59%)

Query:     3 LQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQLD 62
             +++ ++ FNE NTELLIC A L P D F  FD  KL+RL +FY  DF   + I++E +L 
Sbjct:   238 IKKFDDHFNEVNTELLICAASLSPIDAFYEFDHSKLVRLSKFYQVDFSLGEFISIEKELS 297

Query:    63 LY--------------RIGELARTMVNTKKDKVYPLVYQLVTLALILPVAIATVERVFSS 108
             +Y               +G++A+ +V T+K   YP  Y+L+ L LIL VA ATVER FS+
Sbjct:   298 IYIDTVRNDERFSNLKNLGDIAQKVVETRKHLSYPFGYRLLKLVLILHVATATVERCFSA 357

Query:   109 MTFVKNLLRNRMGDQW 124
             M  +++ + N  GD +
Sbjct:   358 MK-IRSPVLNYQGDDF 372


>TAIR|locus:2033523 [details] [associations]
            symbol:AT1G41920 "AT1G41920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012337 EMBL:CP002684 GO:GO:0003676
            SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00537363
            RefSeq:NP_174954.1 UniGene:At.51289 ProteinModelPortal:F4I7X4
            PRIDE:F4I7X4 EnsemblPlants:AT1G41920.1 GeneID:840805
            KEGG:ath:AT1G41920 OMA:DESANRG PhylomeDB:F4I7X4 Uniprot:F4I7X4
        Length = 496

 Score = 185 (70.2 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 38/64 (59%), Positives = 47/64 (73%)

Query:     1 MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRLVEFYPKDFFAIDLIALEMQ 60
             MQ+QE N+RF+E NTELL C+A L P D F  FD+ K+LRL EFYP+DF  +D  +LE Q
Sbjct:   421 MQIQEFNDRFDEVNTELLSCVASLSPIDSFHEFDQLKVLRLSEFYPQDFTHVDRRSLEHQ 480

Query:    61 LDLY 64
             L LY
Sbjct:   481 LGLY 484


>TAIR|locus:2829839 [details] [associations]
            symbol:AT3G29763 "AT3G29763" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012337 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
            EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
            HOGENOM:HOG000238438 IPI:IPI00525782 RefSeq:NP_189620.1
            UniGene:At.65185 ProteinModelPortal:Q3EAW7
            EnsemblPlants:AT3G29763.1 GeneID:822665 KEGG:ath:AT3G29763
            TAIR:At3g29763 InParanoid:Q3EAW7 OMA:MVEICES PhylomeDB:Q3EAW7
            Genevestigator:Q3EAW7 Uniprot:Q3EAW7
        Length = 505

 Score = 126 (49.4 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)

Query:     1 MQLQELNNRFNESNTELLICLARLCPNDLFAAFDKEKLLRL 41
             MQLQE N+RF+E N+ELLIC++ L P D F  FDK  L+RL
Sbjct:   464 MQLQEFNDRFDELNSELLICMSSLSPIDSFRQFDKSMLVRL 504


>TAIR|locus:5019474771 [details] [associations]
            symbol:AT3G30235 "AT3G30235" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 InterPro:IPR025398 Pfam:PF14291
            IPI:IPI00938874 RefSeq:NP_001154654.1 UniGene:At.74661
            ProteinModelPortal:F4J5F9 SMR:F4J5F9 EnsemblPlants:AT3G30235.1
            GeneID:7922539 KEGG:ath:AT3G30235 Uniprot:F4J5F9
        Length = 168

 Score = 95 (38.5 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 22/39 (56%), Positives = 28/39 (71%)

Query:    84 LVYQLVTLALILPVAIATVERVFSSMTFVKNLLRNRMGD 122
             ++ +L+ L LIL VA ATVER FS+M  VK   RNR+GD
Sbjct:   130 VLMRLLKLILILHVATATVERCFSAMKIVKTDRRNRIGD 168


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.141   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       128   0.00091  102 3  11 22  0.43    30
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  548 (58 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.58u 0.14s 12.72t   Elapsed:  00:00:01
  Total cpu time:  12.58u 0.14s 12.72t   Elapsed:  00:00:01
  Start:  Fri May 10 23:45:42 2013   End:  Fri May 10 23:45:43 2013

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