BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043937
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 93/104 (89%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF KVGNILRQT K+++ + S+SNPSIYQAIRCMSSSKLF+GG+SY+ DD SLREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DRETGRSRGFGFVTF++ EEASSAIQALDGQ
Sbjct: 61 HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 93/104 (89%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF KVGNILRQT K+++ + S+SNPSIYQAIRCMSSSKLF+GG+SY+ DD SLREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DRETGRSRGFGFVTF++ EEASSAIQALDGQ
Sbjct: 61 HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 93/104 (89%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF KVGNILRQT K+++ + S+SNPSIYQAIRCMSSSKLF+GG+SY+ DD SLREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DRETGRSRGFGFVTF++ EEASSAIQALDGQ
Sbjct: 61 YKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 92/104 (88%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+LRQTA ++++ E S S PSIYQA+RCMSSSKLFVGGIS+ DDNSL+EAF
Sbjct: 1 MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EARII+DRETGRSRGFGFVT+++ EEASSAIQALDGQ
Sbjct: 61 DKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQ 104
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 91/104 (87%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+LRQTA ++I+ E S S PSIYQA+RCMSSSK+F+GGIS+ DDN L+EAF
Sbjct: 1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EARII+DR+TGRSRGFGFVT+++ EEASSAIQA+DGQ
Sbjct: 61 DKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQ 104
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 89/104 (85%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVGN+LRQTA K+IS E S S PS++QAIR MSSSK+FVGGISY DD SLREAF
Sbjct: 1 MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DRETGRSRGF FVT+++ EEASSAIQALDGQ
Sbjct: 61 GKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQ 104
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 92/104 (88%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SK GNIL+QT K+++ + S+S+PS++QAIRCMSSSKLF+GG++Y+MD++SLREAF
Sbjct: 1 MAFLSKFGNILKQTTSKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V E R+ILDRETGRSRGFGFVTF++ E ASSAIQALDG+
Sbjct: 61 TKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGR 104
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 92/104 (88%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SK GNIL+QT K+++ + S+S+PS++QAIRCMSSSKLF+GG++Y+MD++SLREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V + R+ILDRETGRSRGFGFVTF++ E ASSAIQALDG+
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGR 104
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 89/104 (85%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+LRQTA ++I+ E S S PSIYQA+RCMSSSK+F+GGIS+ DDN L+EAF
Sbjct: 1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V E II+DR+TGRSRGFGFVT+++ EEASSAIQA+DGQ
Sbjct: 61 DKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQ 104
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 92/107 (85%), Gaps = 4/107 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSLR 68
MAFF ++GN+LRQTA +++S E S+PS +QAIR MSS +KLF+GG+SY+ D+ SLR
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSELR-SSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLR 59
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
EAF+KYG V +ARII+DRETGRSRGFGF+T+++VEEASSAIQALDGQ
Sbjct: 60 EAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQ 106
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 92/107 (85%), Gaps = 4/107 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSLR 68
MAFF ++GN+LRQTA +++S + S PS +QAIRCMSS +KLF+GG+SY+ D+ SLR
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSKLR-SPPSFFQAIRCMSSAPSTKLFIGGVSYSTDEQSLR 59
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
EAF+KYG V +ARII+DRETGRSRGFGF+T+++VEEASSAIQALDGQ
Sbjct: 60 EAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQ 106
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 92/107 (85%), Gaps = 4/107 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSLR 68
MAFF ++GN+LRQTA +++S E S+PS +QAIR MSS +KLF+GG+SY+ D+ SLR
Sbjct: 1 MAFFGRIGNLLRQTASRQVSSELR-SSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLR 59
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
EAF+KYG V +ARII+DRETGRSRGFGF+T+++VEEASSAIQALDGQ
Sbjct: 60 EAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQ 106
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 88/104 (84%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+L+ +A K I+ + S S PS++QAIR MSS+KLFVGGISY+ DD SLRE+F
Sbjct: 1 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A+YG V + ++I+DRETGRSRGFGFVTF+T E+ASSAIQ +DGQ
Sbjct: 61 ARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQ 104
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 88/104 (84%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+L+ +A K I+ + S S PS++QAIR MSS+KLFVGGISY+ DD SLRE+F
Sbjct: 1 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A+YG V + ++I+DRETGRSRGFGFVTF+T E+ASSAIQ +DGQ
Sbjct: 61 ARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQ 104
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 89/104 (85%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+++ +A K I+ + S+S PS++QAIR MSS+KLFVGGISY+ DD SLRE+F
Sbjct: 1 MAFLNKIGNLVKNSAVKHINQDFSVSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A+YG V + ++I+DRETGRSRGFGF+TF+T E+ASSAIQ +DGQ
Sbjct: 61 ARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQ 104
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 90/108 (83%), Gaps = 4/108 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSI-SNPSIYQAIRCMSSS---KLFVGGISYNMDDNSL 67
MAFF +VG++LR A +I+ E + S+PS++QAIRC SS+ KLFVGGISYN D+ SL
Sbjct: 1 MAFFGRVGSLLRNAANTKITSELKLRSSPSVFQAIRCFSSTPNTKLFVGGISYNTDEQSL 60
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+AF+KYG V +ARII+DRE+GRS+GFGFVT++TVEEASSAIQALDGQ
Sbjct: 61 SDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQALDGQ 108
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 85/104 (81%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GNIL+ GK + E S SN S++Q IR MSSSKLFVGG+SY D++SL+E F
Sbjct: 1 MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
++YG V EAR+ILDRETGRSRGFGF++F + EEA+SA+QA+DGQ
Sbjct: 61 SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQ 104
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 89/104 (85%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF++VG+IL+Q+ K + E S SN S++QAIR MSSSKLFVGG+SY D++SL+EAF
Sbjct: 1 MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
++YG V EAR+I+DR+TGRSRGFGF++F + EEA+SA+QA+DGQ
Sbjct: 61 SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQ 104
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 86/107 (80%), Gaps = 3/107 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSLR 68
MAF SK GNILRQ A KRI + S+ S+ QA+R MSS SK+FVGGIS++ DD SLR
Sbjct: 1 MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
EAF KYG V EAR+I+DRETGRSRGFGFVT+++ EEASSAIQALDGQ
Sbjct: 61 EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQ 107
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 86/107 (80%), Gaps = 3/107 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSLR 68
MAF SK GNILRQ A KRI + S+ S+ QA+R MSS SK+FVGGIS++ DD SLR
Sbjct: 1 MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
EAF KYG V EAR+I+DRETGRSRGFGFVT+++ EEASSAIQALDGQ
Sbjct: 61 EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQ 107
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 87/104 (83%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF K G +L+ +A K I+ + S+S PS++QAIR MSS+KLF+GG+SY+ D+ LREAF
Sbjct: 1 MAFFGKTGKLLQNSAVKHINHDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
++YG V +A+II+DR+TGRSRGFGF+TF+T EEASSA+QA+D +
Sbjct: 61 SRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNK 104
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 84/104 (80%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+L+Q + + E S S+YQAIR MSSSKLFVGG+S+ D+ SL+EAF
Sbjct: 1 MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+++G V EAR+I+DR+TGRSRGFGFV+F++ EEA+SA+ ALDGQ
Sbjct: 61 SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQ 104
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 77/104 (74%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVG I Q++ I SN S++Q +R MSSSK+FVGG+SY DD L EAF
Sbjct: 1 MAFLSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DR+TGRSRGFGFVTF E+ASSAIQALDGQ
Sbjct: 61 TKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQ 104
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 77/104 (74%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVG I Q++ I SN S++Q +R MSSSK+FVGG+SY DD L EAF
Sbjct: 1 MAFLSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
KYG V EAR+I+DR+TGRSRGFGFVTF E+ASSAIQALDGQ
Sbjct: 61 TKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQ 104
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 82/104 (78%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M+F SKVG++LRQ R+ + S PSIY A+R MSSS+LF+GG+SY MDD SLRE+F
Sbjct: 1 MSFASKVGSLLRQGISGRLGFNETRSVPSIYHALRYMSSSRLFIGGLSYGMDDQSLRESF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+YG V EARII DRETGRSRGFGF++F++ EEA++AI +DG+
Sbjct: 61 TEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITGMDGK 104
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 81/105 (77%), Gaps = 9/105 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF KVGN++RQ+AG S ++QA+RCMSSSKLF+GGISY DD SL+EAF
Sbjct: 1 MAFLRKVGNLVRQSAG---------SGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
A YG V EAR+I+DR TGRSRGFGFVT+++ +EA++AI +DG+V
Sbjct: 52 ANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKV 96
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 81/105 (77%), Gaps = 9/105 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF KVGN++RQ+AG S ++QA+RCMSSSKLF+GGISY DD SL+EAF
Sbjct: 1 MAFLRKVGNLVRQSAG---------SGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
A YG V EAR+I+DR TGRSRGFGFVT+++ +EA++AI +DG+V
Sbjct: 52 ANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKV 96
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 83/105 (79%), Gaps = 10/105 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+G +L++ ++ SNPS+YQAIRCMSS KLFVGGISY DD+SLR+ F
Sbjct: 1 MALANKLGGLLKK---------ATSSNPSVYQAIRCMSS-KLFVGGISYQTDDHSLRDEF 50
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EARII+DRE+GRSRGFGFVT+++ EEAS+AI ALDG+
Sbjct: 51 AKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKT 95
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 80/105 (76%), Gaps = 9/105 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF KVGN++RQ+AG S ++QA+RCMSSSKLF+GGISY DD SL+EAF
Sbjct: 1 MAFLRKVGNLVRQSAG---------SGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
A YG V EAR+I+DR TGRSRGFGFVT+++ +EA++AI +DG+
Sbjct: 52 ANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKT 96
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 10/105 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+G +L++ ++ SNPS+YQAIRCMSS KLFVGG+SY DD+SLR+ F
Sbjct: 1 MALANKLGGLLKK---------ATSSNPSVYQAIRCMSS-KLFVGGLSYGTDDHSLRDEF 50
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EARIILDRE+GRSRGFGFVT+++ EEAS+AI A+DG+
Sbjct: 51 AKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITAMDGKT 95
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 80/104 (76%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF KVGN++RQ+AG S ++QA+RCMSSSKLF+GGISY DD SL+EAF
Sbjct: 1 MAFLRKVGNLVRQSAG---------SGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A YG V EAR+I+DR TGRSRGFGFVT+++ +EA++AI +DG+
Sbjct: 52 ANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGK 95
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G++L+Q+ K +S S+ P+IY A RCMSS K+FVGG+SY +DD +LRE+F
Sbjct: 1 MAFAAKLGSLLKQSVTKHVSSRPSVYMPAIYSAFRCMSS-KVFVGGLSYGVDDQTLRESF 59
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V EA+II DRETGRSRGFGFVTF++ +EA++A++A+DG+
Sbjct: 60 ATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAVEAMDGK 103
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 81/105 (77%), Gaps = 6/105 (5%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M +K+G +L+ + S SN S+YQAIRCMSSSKLFVGG+SY DD+SLR+ F
Sbjct: 1 MMLANKLGGLLKN------ATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 54
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EA+IILDRE+GRSRGFGF+T+++ EEAS+AI A+DG+
Sbjct: 55 AKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKT 99
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 9/105 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M +K+G +L+ ++ SN S+YQAIRCMSSSKLFVGG+SY DD+SLR+ F
Sbjct: 1 MMLANKLGGLLKN---------ATSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EA+IILDRE+GRSRGFGF+T+++ EEAS+AI A+DG+
Sbjct: 52 AKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKT 96
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 82/104 (78%), Gaps = 7/104 (6%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVG I RQT S + SN S+ Q+IRCMSSSK+FVGGISY+ D+ LREAF
Sbjct: 1 MAFLSKVGKIFRQT-----SAHVTASN-SMLQSIRCMSSSKIFVGGISYSTDEFGLREAF 54
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+KYG V +A+II+DRETGRSRGF FVTF++ EEAS+A+Q LDGQ
Sbjct: 55 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQ 97
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 82/104 (78%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+G +L++ ++ SNP++YQAIRCMSSSKLFVGG+SY D+ SLR+AF
Sbjct: 1 MALANKLGGLLKK---------ATSSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ YG + +A+II+DR+TGRSRGFGF+T++ E+ASSAI ALDG+
Sbjct: 52 SHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGK 95
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 82/104 (78%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+GN+L++ ++ S+P++YQ+IRCMSSSKLFVGG+SY D+ SLR+ F
Sbjct: 1 MALANKIGNLLKR---------ATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A YG V EA+II DRETGRSRGFGF+T+++ EEAS+AI ALDG+
Sbjct: 52 ANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGK 95
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 82/105 (78%), Gaps = 10/105 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+G +L++ ++ SN S+YQAIRCMSS KLFVGGISY DD+SLR+ F
Sbjct: 1 MALANKLGGLLKK---------ATSSNLSVYQAIRCMSS-KLFVGGISYQTDDHSLRDEF 50
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EARII+DRE+GRSRGFGFVT+++ EEAS+AI ALDG+
Sbjct: 51 AKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKT 95
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 82/104 (78%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+GN+L++ ++ S+P++YQ+IRCMSSSKLFVGG+SY D+ SLR+ F
Sbjct: 1 MALANKIGNLLKR---------ATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A YG V EA+II DRETGRSRGFGF+T+++ EEAS+AI ALDG+
Sbjct: 52 ANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGK 95
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 82/105 (78%), Gaps = 10/105 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+G +L++ ++ SN S+YQAIRCMSS KLFVGGISY DD+SLR+ F
Sbjct: 1 MALANKLGGLLKK---------ATSSNLSVYQAIRCMSS-KLFVGGISYQTDDHSLRDEF 50
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
AKYG V EARII+DRE+GRSRGFGFVT+++ EEAS+AI ALDG+
Sbjct: 51 AKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKT 95
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Query: 12 MAFFSKVGNILRQTAGKRISCE-SSISNPSIYQAIRCMSS---SKLFVGGISYNMDDNSL 67
MAFF +VGNILRQ ++I E S+S S++QA RCMS+ S+LF+GG+SY++D SL
Sbjct: 1 MAFFGRVGNILRQATNQKIGLEIRSLS--SVFQATRCMSNAPNSRLFIGGVSYSIDAQSL 58
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
E ++YG V +ARII+DRETGR RGFGF+T+S V+EAS A+QALDGQ
Sbjct: 59 GEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRALQALDGQ 106
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 7/104 (6%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVG I QT+ ++ SS+ Q+IRCMSSSK+FVGGISY+ D+ LREAF
Sbjct: 1 MAFLSKVGRIFSQTS-SHVTASSSM-----LQSIRCMSSSKIFVGGISYSTDEFGLREAF 54
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+KYG V +A+II+DRETGRSRGF FVTF++ EEAS+A+Q LDGQ
Sbjct: 55 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQ 97
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF KVGN L+++AG S ++ QA+R MSSSK+FVGGISY DD SL +AF
Sbjct: 1 MAFLQKVGNALKRSAG---------SGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ YG V EA++I+DRE+GRSRGFGFVTF++ EEA +AI +DG+
Sbjct: 52 SNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITGMDGK 95
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 81/104 (77%), Gaps = 7/104 (6%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF SKVG + QT+ ++ SS+ Q+IRCMSSSK+FVGGISY+ D+ LREAF
Sbjct: 1 MAFLSKVGRLFSQTS-SHVTASSSM-----LQSIRCMSSSKIFVGGISYSTDEFGLREAF 54
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+KYG V +A+II+DRETGRSRGF FVTF++ EEAS+A+Q LDGQ
Sbjct: 55 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQ 97
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 80/108 (74%)
Query: 8 RVIIMAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
+V+ MAF S+VG I Q++ I S SI++ +R +S SK+FVGG+SYN DD +L
Sbjct: 27 KVVNMAFLSRVGKIFSQSSASGIGSHLQPSKLSIFRTLRFVSGSKVFVGGLSYNSDDLTL 86
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
R AF+KYG V EAR+++D +TGR +GFGFVTFS EEASSAI+ALDG+
Sbjct: 87 RVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGK 134
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS++ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMFDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|116790981|gb|ABK25812.1| unknown [Picea sitchensis]
Length = 166
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G++L+Q+ K +S S+ P+IY A RCMSS K+FVGG+SY +DD +LRE+F
Sbjct: 1 MAFAAKLGSLLKQSVTKHVSSRPSVYMPAIYSAFRCMSS-KVFVGGLSYGVDDQTLRESF 59
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
A +G V EA+II DRETGRSRGFGFVTF++ +EA++A
Sbjct: 60 ATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAA 96
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 80/108 (74%)
Query: 8 RVIIMAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
+V+ MAF S+VG I Q++ I S SI++ +R +S SK+FVGG+SYN DD +L
Sbjct: 27 KVVNMAFLSRVGKIFSQSSASGIGSHLQPSKLSIFRTLRFVSGSKVFVGGLSYNSDDLTL 86
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
R AF+KYG V EAR+++D +TGR +GFGFVTFS EEASSAI+ALDG+
Sbjct: 87 RVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGK 134
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF+K+G++ RQ+ IS + + S+ +IRCMSSSKLF+GG+ ++ DD +L++AF
Sbjct: 1 MAFFNKLGSLARQS----ISQKGQVPMVSMVNSIRCMSSSKLFIGGLPWSTDDQTLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I+DRETGRSRGFGFV + +VE AS A+ A+DGQ
Sbjct: 57 SGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQ 100
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF+K+G++ RQ+ IS + + S+ IRCMSSSKLF+GG+ ++ DD +L++AF
Sbjct: 1 MAFFNKLGSLARQS----ISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSADDQTLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I+DRETGRSRGFGFV + +VE AS A+ A+DGQ
Sbjct: 57 SGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQ 100
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S++ PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSTM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ AIRCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAIRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 79/104 (75%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA +K+GN+L++ ++ SNP++YQAIRCMSSSK+FVGG+SYN D+ LREAF
Sbjct: 1 MALANKLGNLLKK---------ATSSNPTLYQAIRCMSSSKIFVGGLSYNTDETGLREAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
YG + +A+II+D E+ RSRGFGF+T++ ++A +AI ALDG+
Sbjct: 52 THYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAKAAIMALDGK 95
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+LRQ A + S + +S S+ +R MSSSKLF+GG+SY +DD SL++AF
Sbjct: 1 MAFCNKLGNLLRQGATQ--SSHAPVS--SMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A YG V EAR+I DR+TGRSRGFGFV F++ E A+SA+ A+DGQ
Sbjct: 57 ASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQ 100
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 81/104 (77%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +KVGN+LRQ A + S ++ +S S+ IRCMSSSKLF+GG+SY +DD SL++AF
Sbjct: 1 MAFCNKVGNVLRQGAAR--STQAPVS--SMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V +A++I DR++GRSRGFGFV FS E ASSA+ A+DG+
Sbjct: 57 SGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGK 100
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQ 102
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAFF+K G+++RQ+ +S + S+ +IRCMSSSKLF+GG++++ DD SL++AF
Sbjct: 1 MAFFNKFGSLVRQS----VSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DR+TGRSRGFGFV++ + E AS A+ A+DGQ
Sbjct: 57 SGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQ 100
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 81/104 (77%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+GN+LRQ A + S ++ +S S+ +R MSSSKLF+GG+SYN+DD SLR+AF
Sbjct: 1 MAFCNKIGNLLRQGATQ--STQAPVS--SMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
YG V EAR+I DRETGRSRGFGFV F++ E A+SA+ ++DGQ
Sbjct: 57 TTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL-SMDGQ 99
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +KVGN+LRQ A + S + ++ S+ IRCMSSSKLF+GG+SY +DD SL++AF
Sbjct: 1 MAFCNKVGNVLRQGAAR--STHAPVA--SMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V +A++I DR++GRSRGFGFV FS E ASSA+ A+DG+
Sbjct: 57 SGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGK 100
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 79/104 (75%), Gaps = 8/104 (7%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF S++GN LR+T S + Q +RCMSSSKLFVGG+S+ D+ +L++AF
Sbjct: 1 MAFASRIGNALRRTLAPTCS--------PLLQPVRCMSSSKLFVGGLSFATDETTLKDAF 52
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+++G V EARII+DRE+GRSRGFGF+TF++ EEAS+A+ ++DG+
Sbjct: 53 SEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGK 96
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GR RGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIKAMDGQ 102
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 79/104 (75%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +V N LR+T S SNPS+ QA+RCMSS KLFVGG+SY DD +L++ F
Sbjct: 1 MAFAGRVVNALRRT--------SVSSNPSLLQAVRCMSS-KLFVGGLSYATDDTTLKDVF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ YG V EARII+DR+TG+S+G+GF+T+++ EEA++A+ A+DG+
Sbjct: 52 SHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGK 95
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 79/104 (75%), Gaps = 8/104 (7%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF S++GN LR+T S + Q +RCMSSSKLFVGG+S+ D+ +L++AF
Sbjct: 1 MAFASRIGNALRRTLAPTCS--------PLLQPVRCMSSSKLFVGGLSFATDETTLKDAF 52
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+++G V EARII+DRE+GRSRGFGF+TF++ EEAS+A+ ++DG+
Sbjct: 53 SEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGK 96
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 80/109 (73%), Gaps = 5/109 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISN-----PSIYQAIRCMSSSKLFVGGISYNMDDNS 66
MA+F K+G +LR++A + + S + + P++ A R MSSSKLF+GG+++ D+N+
Sbjct: 1 MAYFGKLGGLLRRSAAQSVLTASGLGSATVAVPAMLVAQRMMSSSKLFIGGLAWATDENT 60
Query: 67 LREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
LR+AF+ +G V E +IILDR+TGRSRGFGFV F++ EEA A+Q +DG+
Sbjct: 61 LRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGR 109
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G+++RQ+ ++ + S+ +IRCMSSSKLF+GG+SY +D+SL++AF
Sbjct: 1 MAFCNKIGSLVRQS----VAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V AR+I DR+TGRSRGFGFV FS+V+ ASSA+ A+DGQ
Sbjct: 57 SGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQ 100
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ +G +S + + PS+ A RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQNISGNAVSATTPM--PSMLDAFRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 LATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + S+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMK--SMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +AR+I+DR++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQ 102
>gi|388521423|gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +KVGN+LRQ A +R S S+ IRCMSSSKLF+GG+SY +DD SL +AF
Sbjct: 1 MAFLNKVGNVLRQAAAQR----SQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I+DR+TGRSRGFGFV+F + E ASSA+ ++DGQ
Sbjct: 57 SSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQ 100
>gi|388518113|gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +KVGN+LRQ A +R S S+ IRCMSSSKLF+GG+SY +DD SL +AF
Sbjct: 1 MAFLNKVGNVLRQGAAQR----SQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I+DR+TGRSRGFGFV+F + E ASSA+ ++DGQ
Sbjct: 57 SSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQ 100
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 12 MAFFSKVGNILRQT-AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF++K+G +LRQ+ +G +S S + PS+ A+RCMS+ KLFVGG+S+ DD SLR+A
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPM--PSMLDAVRCMST-KLFVGGLSWGTDDQSLRDA 57
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
FA +G V +A +I+D ++GRSRGFGFV FS E A+ AI+A+DGQ
Sbjct: 58 FATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIKAMDGQ 102
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISN-----PSIYQAIRCMSSSKLFVGGISYNMDDNS 66
MAFF+K G +LR + + +S + P++ A R MSSSKLF+GG+++ D+N+
Sbjct: 1 MAFFAKFGGLLRHNSAQAAMMKSGLGAGAAAVPAMLMAQRFMSSSKLFIGGLAWATDENT 60
Query: 67 LREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
LR+AF +G V + +IILDR+TGRSRGFGFV F++ +EA A+Q +DG+
Sbjct: 61 LRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGR 109
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 79/110 (71%), Gaps = 6/110 (5%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISN-----PSIYQAIRCMSSSKLFVG-GISYNMDDN 65
MA+F K+G +LR++A + + S + + P++ R MSSSKLF+G G+++ D+N
Sbjct: 1 MAYFGKLGGLLRKSAAQSVLTASGLGSAAVAVPAMLVVQRMMSSSKLFIGAGLAWATDEN 60
Query: 66 SLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+LR+AF+ +G V E +IILDR+TGRSRGFGFV F++ EEA A+Q +DG+
Sbjct: 61 TLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGR 110
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ+ + ++ P++ AIRCMSS +LFVGG+S+ DD SL+EAF
Sbjct: 1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIRCMSS-RLFVGGLSWGTDDQSLKEAF 59
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+G V +A++I+DR++GRSRGFGFV FS + A A+ A+DGQ
Sbjct: 60 TSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQ 103
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G++LRQ+A S S+ S P+++ A R MS+ KLFVGG+S+ +D SL+EAF
Sbjct: 1 MAAFNKLGSLLRQSA--FASSVSAGSAPAMFNAARFMSN-KLFVGGLSWGTNDGSLKEAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DRETGRSRGFGFV FS E+A A ++DGQ
Sbjct: 58 SSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSMDGQ 101
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +++G+++RQT ++S S+ +IRCMSSS+LFVGG+S+ DD SL++AF
Sbjct: 1 MAFCNRIGSLIRQTV-----SQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
+ +G V +A++I DRETGRSRGFGFV F E A SA+ ++DG
Sbjct: 56 SSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDG 98
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G +LR +A +S + S+P+++ A R MS+ KLF+GG+ + +DD LREAF
Sbjct: 1 MAAFNKLGGLLRHSA--LVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DRETGRSRGFGFV +S + A AI A+DG+
Sbjct: 58 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 101
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G +LR +A +S + S+P+++ A R MS+ KLF+GG+ + +DD LREAF
Sbjct: 1 MAAFNKLGGLLRHSA--LVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DRETGRSRGFGFV +S + A AI A+DG+
Sbjct: 58 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 101
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G++ R +A S S+ S P+++ A R MS+ KLFVGG+S+ DD SL++AF
Sbjct: 1 MAAFNKLGSLFRHSA--LASSASTGSTPAMFNAARLMST-KLFVGGLSWGTDDQSLKDAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+G V EAR+I DR+TG+SRGFGFV+FS ++A +A+ ++DGQ
Sbjct: 58 TSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQ 101
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G +LR +A +S + S+P+++ A R MS+ KLF+GG+ + +DD LREAF
Sbjct: 1 MAAFNKLGGLLRHSA--LVSGITGGSSPAVFNAARLMST-KLFIGGLDWGVDDVKLREAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DRETGRSRGFGFV +S + A AI A+DG+
Sbjct: 58 SSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGK 101
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 81/108 (75%), Gaps = 6/108 (5%)
Query: 12 MAFFSKVGNILRQT----AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
MAF +++G ++RQ+ A +R S ++I P+++ R MS SKLFVGG+++ D+++
Sbjct: 1 MAFLAQLGGLVRQSIARNALQRHSSAAAI--PAMFLVSRGMSGSKLFVGGLAWGTTDDNI 58
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+EAF+ +G V E +II DR+TGRSRGFGFVTF+T ++A +A+QALDG+
Sbjct: 59 KEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGR 106
>gi|356503807|ref|XP_003520694.1| PREDICTED: LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 2,
mitochondrial-like [Glycine max]
Length = 148
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 7/106 (6%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF++KVGN+LRQ A + +S S+ IRCMSSSKLF+GG+SY +DD SL++A
Sbjct: 1 MAFYNKVGNVLRQGA---TAAHKHLS--SMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAS 55
Query: 72 AKYGYV--NEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +GYV + ++I +RE+GR RGFGFV FS E ASS + +DG+
Sbjct: 56 SGFGYVVDGKTKVITNRESGRXRGFGFVNFSNDESASSTLSTMDGK 101
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 81/108 (75%), Gaps = 6/108 (5%)
Query: 12 MAFFSKVGNILRQT----AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
MAF +++G ++RQ+ A +R S ++I P+++ R MS SKLFVGG+++ D+++
Sbjct: 1 MAFLAQLGGLVRQSIARNALQRHSGAAAI--PAMFLVSRGMSGSKLFVGGLAWGTTDDNI 58
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+EAF+ +G V E +II DR+TGRSRGFGFVTF+T ++A +A+QALDG+
Sbjct: 59 KEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGR 106
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 79/104 (75%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G++LR +A S ++ S+P+++ A R MS+ KLFVGG+S+ +DD LREAF
Sbjct: 1 MAAFNKLGSLLRHSA--LASGVAASSSPAVFNAARLMST-KLFVGGLSWGVDDMKLREAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DR+TG+SRGFGFV +++ + A++AI +DG+
Sbjct: 58 SGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAISGMDGK 101
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 76/104 (73%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+ +GN+L+Q A +S S+ +IRCMSSSKLF+GG+S+ DD SL++AF
Sbjct: 1 MALFN-IGNLLKQKA----VTAGPMSMTSMMNSIRCMSSSKLFIGGLSWGTDDQSLKDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V EAR+I+DR TG+SRGFGFV ++ E ASSA+ ++DGQ
Sbjct: 56 ASFGDVTEARVIMDRNTGKSRGFGFVEYNDTESASSAMSSMDGQ 99
>gi|225433489|ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera]
gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 79/104 (75%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF ++ GN+LRQ+ + + + S ++ +IRCMSS+KLF+GG+SY DD SL++AF
Sbjct: 1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAF 60
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ +G V EAR+I DR+TGRSRGFGFV F++ + ASSA+ A+DGQ
Sbjct: 61 SSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQ 104
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ IS ++ S+ ++R MS+ KLF+GG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ A++AI +DG+
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M+F +K+G +LRQT ++ S+ ++R MS+ KLFVGG+S+ DD SLR+AF
Sbjct: 1 MSFCNKLGGLLRQTI---TPSGGNVPVTSMLGSLRLMST-KLFVGGLSWGTDDQSLRDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV FS AS+AI +DG+
Sbjct: 57 AHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGK 100
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ I+ ++ S+ ++R MS+ KLFVGG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ITPIGNVPVTSMLGSLRLMST-KLFVGGLSWGTDDQSLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ AS+AI +DG+
Sbjct: 56 AHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAISEMDGK 99
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ IS ++ S+ ++R MS+ KLF+GG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ A++AI +DG+
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ IS ++ S+ ++R MS+ KLF+GG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ A++AI +DG+
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ IS ++ S+ ++R MS+ KLF+GG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ A++AI +DG+
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +LRQ IS ++ S+ ++R MS+ KLF+GG+S+ DD SLR+AF
Sbjct: 1 MAFCNKLGGLLRQN----ISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV F+ A++AI +DG+
Sbjct: 56 AHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+R MSSSKLF+GG+SYN+DD SLR+AF YG V EAR+I DRETGRSRGFGF+ F++ E
Sbjct: 5 LRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEES 64
Query: 105 ASSAIQALDGQ 115
A+SA+ ++DGQ
Sbjct: 65 ATSAL-SMDGQ 74
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 79/104 (75%), Gaps = 3/104 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MA F+K+G+ LR + S S+ S+P+++ A R MS+ KLFVGG+S+N +D+SL+EAF
Sbjct: 1 MAAFNKLGSFLRHSG--LTSSASAGSSPAMFNAARLMST-KLFVGGLSWNTNDDSLKEAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+G V EAR+I DRE+GRSRGFGFV+F+ ++A SA+ A+DG+
Sbjct: 58 TSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGK 101
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 81/104 (77%), Gaps = 8/104 (7%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +VG++LR+T+ SN S+ QAIRCMSSSKLFVGG+SY DD +L++AF
Sbjct: 1 MAFACRVGSVLRRTS--------QSSNSSLLQAIRCMSSSKLFVGGLSYATDDPTLKDAF 52
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ YG V EAR+I+DR+TGRS+GFGF+T+++ E A++AI A+DG+
Sbjct: 53 SHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAAAAISAMDGK 96
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M+F +K+G +LRQ ++ S+ ++R MS+ KLFVGG+S+ DD SLR+AF
Sbjct: 1 MSFCNKLGGLLRQNI---TPSGGNVPVTSMLGSLRLMST-KLFVGGLSWGTDDASLRDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGRSRGFGFV FS AS+AI +DG+
Sbjct: 57 AHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGK 100
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+ ILRQ +S S+ S+ ++R MSS KLFVGG+S+ DD+SL++AF
Sbjct: 1 MAFCNKLSGILRQG----VSHSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+G V EA +I DRETGRSRGFGFV+FS + A++AI+ +DG+
Sbjct: 56 TSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+ ILRQ +S S+ S+ ++R MSS KLFVGG+S+ DD+SL++AF
Sbjct: 1 MAFCNKLSGILRQG----VSQSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAF 55
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+G V EA +I DRETGRSRGFGFV+FS + A++AI+ +DG+
Sbjct: 56 TSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M+F +K+G +LRQ ++ S+ ++R MS+ KLFVGG+S+ DD SLR+AF
Sbjct: 1 MSFCNKLGGLLRQNI---TPSGGNVPVTSMLGSLRLMST-KLFVGGLSWGTDDASLRDAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
A +G V +A++I+DRETGR RGFGFV FS AS+AI +DG+
Sbjct: 57 AHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAISEMDGK 100
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+SKLF+GG+++ +DD +LR AFA YG V EAR+I+DRETGRSRGFGFVTF EA +A+
Sbjct: 9 ASKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAV 68
Query: 110 QALDGQ 115
Q +DG
Sbjct: 69 QGMDGH 74
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 62/76 (81%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
S+ IRCMSSSKLF+GG+ ++ DD++L+EAF+ YG V EAR+I+DRETGRSRGFGFV++
Sbjct: 3 SMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSY 62
Query: 100 STVEEASSAIQALDGQ 115
+ E AS A A+DGQ
Sbjct: 63 DSSESASEAQSAMDGQ 78
>gi|22725943|gb|AAN04953.1| Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 147
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
QA+R + + + GGISY DD SL+EAFA YG V EAR+I+DR TGRSRGFGFVT+++
Sbjct: 54 QAVRRLGLAAV-PGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTST 112
Query: 103 EEASSAIQALDGQV 116
+EA++AI +DG+V
Sbjct: 113 DEAAAAITGMDGKV 126
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF S++G L+ + + ++ + P+ Y R SS KLF+GG+++ ++ LR+AF
Sbjct: 1 MAFMSRLGGSLK--GALKPNRLAAAALPATYTLSRGFSS-KLFIGGLAWGTEERGLRDAF 57
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
+ +G + E R+I DRETGRSRGFGFV++ T +EA A++A+DG+V
Sbjct: 58 SPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAMDGRV 102
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG+S+N DDNSLR+ F ++G V +A ++ DR+TGRSRGFGFV FST EEA++A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 54/65 (83%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG+S+N DDNSLR+ F ++G V +A ++ DR+TGRSRGFGFV FST +EA++A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
S+ ++R MS+ KLF+GG+S+ DD SLR+AFA +G V +A++I+DRETGRSRGFGFV F
Sbjct: 6 SMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNF 64
Query: 100 STVEEASSAIQALDGQ 115
+ A++AI +DG+
Sbjct: 65 NDEGAATAAISEMDGK 80
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 54/63 (85%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KLFVGG+S++ DDNSLR AF ++G V +A++ILDR+TG+SRGFGFVTFS+ +EA +A
Sbjct: 2 SAKLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAK 61
Query: 110 QAL 112
AL
Sbjct: 62 GAL 64
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 55/65 (84%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K+FVGG+S++ DD+SLR AF ++G V EA++I DR+TGRSRGFGFVTF+ +A++AI
Sbjct: 2 SNKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAI 61
Query: 110 QALDG 114
+ +DG
Sbjct: 62 EEMDG 66
>gi|21553495|gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 12/110 (10%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M FS+ GNI RQ + S ++ Q ++ SK+FVGG+S + D L+EAF
Sbjct: 1 MGLFSRAGNIFRQPRALQASN-------AMLQGNLSLTPSKIFVGGLSPSTDVELLKEAF 53
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQV 116
+G + +A ++LDRE+G SRGFGFVT+ ++E A++A+QA LDG++
Sbjct: 54 GSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRI 103
>gi|15221825|ref|NP_173298.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
gi|9795594|gb|AAF98412.1|AC026238_4 Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gi|29029110|gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
gi|110743184|dbj|BAE99483.1| hypothetical protein [Arabidopsis thaliana]
gi|332191616|gb|AEE29737.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
Length = 155
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 12/110 (10%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M FS+ GNI RQ + S ++ Q ++ SK+FVGG+S + D L+EAF
Sbjct: 4 MGLFSRAGNIFRQPRALQASN-------AMLQGNLSLTPSKIFVGGLSPSTDVELLKEAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQV 116
+G + +A ++LDRE+G SRGFGFVT+ ++E A++A+QA LDG++
Sbjct: 57 GSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRI 106
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 12/110 (10%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
M FS+ GNI RQ + S ++ Q ++ SKLFVGG+S D L+EAF
Sbjct: 4 MGLFSRAGNIFRQPRALQASN-------AMLQGNLSLTPSKLFVGGLSPATDVELLKEAF 56
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ-----ALDGQV 116
+G + +A ++LDRE+G SRGFGFVT+ ++E+A++A+Q LDG++
Sbjct: 57 GSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEDANNAMQCMHNKELDGRI 106
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 52/63 (82%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KLFVGG+S+ DDNSLR AF ++G V +A++I DR+TG+SRGFGFVTF++ +EA +A
Sbjct: 2 SAKLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAK 61
Query: 110 QAL 112
AL
Sbjct: 62 NAL 64
>gi|242050818|ref|XP_002463153.1| hypothetical protein SORBIDRAFT_02g038590 [Sorghum bicolor]
gi|241926530|gb|EER99674.1| hypothetical protein SORBIDRAFT_02g038590 [Sorghum bicolor]
Length = 293
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 33/105 (31%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPS-IYQAIRCMSSSKLFVGGISYNMDDNSLREA 70
MAF S++GN LR+T S+SN + + Q +RCMSSSKLFVG
Sbjct: 1 MAFVSRIGNALRRT---------SVSNSAPLLQPVRCMSSSKLFVG-------------- 37
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
ARII DRE+GRS+GFGF+T+++ EEAS+A+ ++DG+
Sbjct: 38 ---------ARIITDRESGRSKGFGFITYTSTEEASAAVTSMDGK 73
>gi|302762761|ref|XP_002964802.1| hypothetical protein SELMODRAFT_69504 [Selaginella moellendorffii]
gi|300167035|gb|EFJ33640.1| hypothetical protein SELMODRAFT_69504 [Selaginella moellendorffii]
Length = 94
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 57 GISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
G+++ +DD +LR AFA YG V EAR+I+DRETGRSRGFGFVTF EA +A+Q +DG
Sbjct: 1 GLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGMDGH 59
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++K++VG + + DDNSL + F+++G V EAR++ DRETGRSRGFGFVT+S+ E + A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 109 IQALDG 114
I ALDG
Sbjct: 265 IAALDG 270
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + +N+D+ L E F G V + II DRETG SRGFGFVT TVEEA ++
Sbjct: 113 TKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVE 172
>gi|116199747|ref|XP_001225685.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
gi|88179308|gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
Length = 105
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS SK++VG +S++ DD SLR AF YG V ++ ++ DR+T RSRGFGFVTFST EEA +
Sbjct: 1 MSGSKVYVGNLSWSTDDMSLRTAFEAYGLVVDSIVMKDRDTNRSRGFGFVTFSTTEEAEA 60
Query: 108 AIQALDGQ 115
AI LD Q
Sbjct: 61 AIAGLDQQ 68
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++K++VG + + DDNSL + F+++G V EAR++ DRETGRSRGFGFVT+S+ E + A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 109 IQALDG 114
I ALDG
Sbjct: 265 IAALDG 270
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +KLFVG + +N+D+ L E F G V + II DRETG SRGFGFVT TVEE
Sbjct: 107 VELPEGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEE 166
Query: 105 ASSAIQ 110
A ++
Sbjct: 167 AEKGVE 172
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DDNSL AF+ YG V E++IILDRET RSRGFGFVTFST E SAI+
Sbjct: 9 RCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 54/65 (83%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKL+VG +S+N D++LR+ F+++G V ++ I+ DRETGR+RGFGFVTFST E+A++A+
Sbjct: 2 SKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD 61
Query: 111 ALDGQ 115
AL+ Q
Sbjct: 62 ALNEQ 66
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 54/68 (79%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS +K++VG +S+N D++LR+AF ++G V ++ ++ DRETGRSRGFGFVTFST EEA
Sbjct: 1 MSGAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEI 60
Query: 108 AIQALDGQ 115
+IQ ++ Q
Sbjct: 61 SIQQMNEQ 68
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFVGG+++ ++LR F+++G V +A ++ DRETGRSRGFGFVTFS+ EEAS+AI+
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNEQ 66
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 54 FVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+ ++
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 114 GQ 115
G+
Sbjct: 71 GK 72
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 20/115 (17%)
Query: 12 MAFFSKVGNILRQTAGKRIS---CESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLR 68
MAFFS V LRQ++ S C ++++ P KLF+ G+S D L
Sbjct: 1 MAFFSGVQRFLRQSSHNLTSVRLCSTTLTTP------------KLFISGLSRQTTDRKLN 48
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQVTF 118
EAFA +G + EA++I DR +GRS+GFGFV+++++EEA A + LDG V F
Sbjct: 49 EAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGMNAKFLDGWVIF 103
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS+KLFVGG+S+++D SL+EAF+ +G V E I+ D+++GRSRGFGFV FS ++A A
Sbjct: 36 SSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCA 95
Query: 109 IQALDGQ 115
A+DG+
Sbjct: 96 KDAMDGK 102
>gi|194385376|dbj|BAG65065.1| unnamed protein product [Homo sapiens]
Length = 142
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQV 116
++G+V
Sbjct: 67 MNGKV 71
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++ LFVGGI++ D++LREAF + G V A+II+D+ TGRSRGFGFV ST EEA +AI
Sbjct: 2 NTNLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAI 61
Query: 110 QALDGQ 115
Q DG+
Sbjct: 62 QMWDGK 67
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL+ AF+KYG V +++II DRETGRSRGFGFVTF++ E AI+A
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL+ AF+KYG V +++II DRETGRSRGFGFVTF++ E AI+A
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL+ AF+KYG V +++II DRETGRSRGFGFVTF++ E AI+A
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 54/69 (78%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
+K+FVG +S+ D+NSL +AF+++G V ++ ++ DRETGRSRGFGFVTFS+ E AS
Sbjct: 7 AAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESAS 66
Query: 107 SAIQALDGQ 115
+A+ A++GQ
Sbjct: 67 AAVDAMNGQ 75
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 53/64 (82%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D++LREAF +YG V ++ ++ DRETGRSRGFGFVT+S+ EEAS+AI
Sbjct: 2 SAKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAI 61
Query: 110 QALD 113
L+
Sbjct: 62 SGLN 65
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 55/68 (80%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+S+K++VG +S+N D++LR+AF+ +G V ++ ++ DR+TGRSRGFGFVT+S+ +EA S
Sbjct: 1 MNSAKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAES 60
Query: 108 AIQALDGQ 115
AI L+ Q
Sbjct: 61 AISGLNDQ 68
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
+++ + +SKLFV G+S+++D+ SL++AF+ +G V+E RI+ D+++GRSRGFGFV F
Sbjct: 14 TLHNSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNF 73
Query: 100 STVEEASSAIQALDGQVTF 118
S EA A A+DG+
Sbjct: 74 SKENEAVCAKDAMDGKALL 92
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVGG+S+N DDN LR F ++G V EA ++ DR+TGRSRGFGFV ++ +A +AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIA 61
Query: 111 ALDGQ 115
+DGQ
Sbjct: 62 NMDGQ 66
>gi|34535789|dbj|BAC87434.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQV 116
++G+V
Sbjct: 67 MNGKV 71
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D+SLR+AF++YG V ++ ++ DR+TGRSRGFGFVT+S EEA +AI
Sbjct: 2 SAKVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAI 61
Query: 110 QALDGQ 115
+L Q
Sbjct: 62 ASLHDQ 67
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAF+KYG +++ +I+DRETGR RGFGFV + E+A A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVGG+S+N DDN LR F ++G V EA ++ DR+TGRSRGFGFV + +A +AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 111 ALDGQ 115
+DGQ
Sbjct: 62 NMDGQ 66
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +K+F+G + + +DD SL E F +G V EA+I+ DR+TGRSRGFGFVT S+ +EA A
Sbjct: 95 SHTKVFIGNLPWGVDDGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPKEADEA 154
Query: 109 IQALDG 114
+++LDG
Sbjct: 155 VKSLDG 160
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEAR-IILDRETGRSRGFGFVTFSTVEEASSAI 109
S+++VG +S+N D L + + G + ++ DRETGRSRGFG+VT ++++ A A+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 110 QALDGQV 116
Q LDG +
Sbjct: 61 QKLDGHI 67
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 222 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 276
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 277 MSDVDELNEAISALDGQ 293
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 135 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 194
Query: 111 ALD 113
+
Sbjct: 195 KFN 197
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+ + DD SL+ AF+KYG V +++II DRETGRSRGFGFVTF++ E AI+A
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 50/63 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++VG +SY++DD SL + FA++G V ARI++DRETGRS+GF FV ST +EA++AI
Sbjct: 4 KIYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAK 63
Query: 112 LDG 114
L+G
Sbjct: 64 LNG 66
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+K+FVG +S+ +D+ +L+E F+ YG V +AR++ DRE+GRSRGFGFVT+S V E +A
Sbjct: 105 DPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAA 164
Query: 109 IQALDG 114
I +LDG
Sbjct: 165 IDSLDG 170
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL++G + + D L ++G V +I D+E+GRSRGF FVT +T E+A + I+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 112 LDGQ 115
LDG
Sbjct: 61 LDGH 64
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 53/68 (77%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MSS+K++VG +S+N +D SLR+ F+++G V +A ++ DRETGRSRGFGFVTFS EA +
Sbjct: 1 MSSAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Query: 108 AIQALDGQ 115
AI L+ Q
Sbjct: 61 AIGGLNEQ 68
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E +AI+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 237 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 291
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 292 MSDVDELNEAISALDGQ 308
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 212 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 266
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 267 MSDVDELNEAISALDGQ 283
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 125 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 184
Query: 111 ALD 113
+
Sbjct: 185 KFN 187
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + + +DD L + F+++G V EAR++ DRETGRSRGFGFVT ST E AI A
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275
Query: 112 LDGQ 115
LDGQ
Sbjct: 276 LDGQ 279
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D +L E F + G V A +I +RET +SRGFGFVT STVEEA A++
Sbjct: 121 AKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 180
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G R+ S PS+ +++VG + + +DD+ L + F+++G V +AR++ DR
Sbjct: 196 GSRVDRPPRQSGPSL----------RIYVGNLPWQVDDSKLVQMFSEHGKVVDARVVYDR 245
Query: 87 ETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
ETGRSRGFGFVT +T +E AI ALDGQ
Sbjct: 246 ETGRSRGFGFVTMATQDELDDAIAALDGQ 274
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 30 ISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETG 89
+ +++ + + + + +K++VG + Y++D L + F + G V A +I +RET
Sbjct: 95 VEASAAVEDEEVGEYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETD 154
Query: 90 RSRGFGFVTFSTVEEASSAIQAL 112
RSRGFGFVT STVEEA A++ L
Sbjct: 155 RSRGFGFVTMSTVEEADKAVEML 177
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 59/81 (72%)
Query: 35 SISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGF 94
S++ ++ +A +++KLFV G+S+++D+ SL++AF+ +G V E I+ DR +GRSRGF
Sbjct: 2 SVARKALTKAHNPATNNKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGF 61
Query: 95 GFVTFSTVEEASSAIQALDGQ 115
GFV+F +EA SA A+DG+
Sbjct: 62 GFVSFCKEDEAVSAKDAMDGK 82
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 237 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 291
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 292 MSDVDELNEAISALDGQ 308
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 218 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 272
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 273 MSDVDELNEAISALDGQ 289
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 131 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 190
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +DD+ L + F+++G V +AR++ DRETGRSRGFGFVT +T EE A
Sbjct: 235 PSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDA 294
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 295 IAALDGQ 301
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K++VG + Y++D L + F + G V + +I +RET RSRGFGFVT STVEE
Sbjct: 137 VEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEE 196
Query: 105 ASSAIQ 110
A A++
Sbjct: 197 AEKAVE 202
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG++++ DD SL+EAF+ YG V E++II DRETGRSRGFGFVTF+ + AI A
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 112 LDGQV 116
++G++
Sbjct: 69 MNGKM 73
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ DD +LR+ F ++G V EA ++ DR+TGRSRGFGFV F+ +A +AIQ
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +Q +S S+ ++R MS+ KL++GG+S D++SL++AF
Sbjct: 1 MAFCTKLGGHWKQGVNVPVS--------SMLGSLRYMST-KLYIGGLSPGTDEHSLKDAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ + V EAR++ ++ TGRSRG+GFV F + + A+SAI A++GQ
Sbjct: 52 SSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ 95
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 223 PRVYEP-----AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 277
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 278 MSDVDELNEAISALDGQ 294
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y+++ +L F + G V A +I +RET +SRGFGFVT S+V+EA +A++
Sbjct: 136 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 195
Query: 111 ALD 113
+
Sbjct: 196 KFN 198
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +Q +S S+ ++R MS+ KL++GG+S D++SL++AF
Sbjct: 1 MAFCTKLGGHWKQGVNVPVS--------SMLGSLRYMST-KLYIGGLSPGTDEHSLKDAF 51
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ + V EAR++ ++ TGRSRG+GFV F + + A+SAI A++GQ
Sbjct: 52 SSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ 95
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAF+KYG +++ +I+DRETGR RGFGFV + E+A A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAF+KYG +++ +I+DRETGR RGFGFV + E+A A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 70 PRVYE-----PAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 124
Query: 99 FSTVEEASSAIQALDGQ 115
S V+E + AI ALDGQ
Sbjct: 125 MSDVDELNEAISALDGQ 141
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 71 FAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
F + G V A +I +RET +SRGFGFVT S+V+EA +A++ +
Sbjct: 3 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFN 45
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAF+KYG +++ +I+DRETGR RGFGFV + E+A A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAF+KYG +++ +I+DRETGR RGFGFV + E+A A+ A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 50/63 (79%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKL+VG +S++ D+ LR AF +YG V ++ ++ DRETGRSRGFGFVTF+T EEA++A+
Sbjct: 3 SKLYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMG 62
Query: 111 ALD 113
+D
Sbjct: 63 QMD 65
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S+++++VG +S+ +DD +L F++ G V EAR+I DRETGRSRGFGFVT+++ EE + A
Sbjct: 168 STNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRA 227
Query: 109 IQALDG 114
I++LDG
Sbjct: 228 IESLDG 233
>gi|345567860|gb|EGX50762.1| hypothetical protein AOL_s00054g848 [Arthrobotrys oligospora ATCC
24927]
Length = 130
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG+SY DDN LR+ F ++G V +A ++ DR+TGRSRGFGFV FS +EA++A +
Sbjct: 2 SKLFIGGLSYGTDDNRLRQKFEEFGVVEDAIVVKDRDTGRSRGFGFVRFSNDDEATAAQE 61
Query: 111 AL 112
A+
Sbjct: 62 AM 63
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ KLF+GG++++ D++LRE F+K+G + EA ++ DR+T RSRGFGFV FS+ EA +
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADA 60
Query: 108 AIQALDGQ 115
A+ A++ Q
Sbjct: 61 ALNAMNNQ 68
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S+++++VG +S+ +DD +L F++ G V EAR+I DRETGRSRGFGFVT+++ EE + A
Sbjct: 202 STNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRA 261
Query: 109 IQALDG 114
I++LDG
Sbjct: 262 IESLDG 267
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L F + G V +I D+ TGRSRGFGFVT STVEE +A Q
Sbjct: 91 KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150
Query: 112 LDG 114
+G
Sbjct: 151 FNG 153
>gi|56388843|gb|AAH87677.1| Rbm3 protein [Rattus norvegicus]
Length = 148
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQV 116
++G+V
Sbjct: 67 MNGEV 71
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKL+VG +S+N D +LR+ F+++G V ++ I+ DR+TGR+RGFGFVTFST E+A++A+
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 111 ALDGQ 115
AL+ Q
Sbjct: 62 ALNEQ 66
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S++ D++LREAF++YG V ++ ++ DRETGRSRGFGFVTFS+ +EA +AI
Sbjct: 2 STKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAI 61
Query: 110 QALDGQ 115
+L Q
Sbjct: 62 NSLHEQ 67
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 24 QTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARII 83
+T G S ++ ++ + QA KLFVGG+S++ ++ SL + F+KYG ++E ++
Sbjct: 8 ETPGSHRSSQTQVTPEA--QAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVV 65
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
DRET RSRGFGFVTF +++A A+ A++G+
Sbjct: 66 KDRETQRSRGFGFVTFENIDDAKDAMMAMNGK 97
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 112 LDGQ 115
++G+
Sbjct: 72 MNGK 75
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 112 LDGQ 115
++G+
Sbjct: 72 MNGK 75
>gi|148702007|gb|EDL33954.1| mCG116386, isoform CRA_d [Mus musculus]
Length = 106
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQV 116
++G+V
Sbjct: 67 MNGEV 71
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVGG+S+++D+ SL++AF+ +G V E RI+ D+++GR+RGFGFV FS + A SA
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 111 ALDGQ 115
A+DG+
Sbjct: 96 AMDGK 100
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 13 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 72
Query: 112 LDGQ 115
++G+
Sbjct: 73 MNGK 76
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 11 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70
Query: 112 LDGQ 115
++G+
Sbjct: 71 MNGK 74
>gi|8809615|dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 9/104 (8%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
MAF +K+G +Q +S S+ ++R MS+ KL++GG+S D++SL++AF
Sbjct: 33 MAFCTKLGGHWKQGVNVPVS--------SMLGSLRYMST-KLYIGGLSPGTDEHSLKDAF 83
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
+ + V EAR++ ++ TGRSRG+GFV F + + A+SAI A++GQ
Sbjct: 84 SSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ 127
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 22 LRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEAR 81
+R+ AGK S + ++PS++ + R +++ KLFVGG+S+ D L EAF++YG V EA
Sbjct: 5 MRRIAGK--SAATISTSPSLFVSYRGIAT-KLFVGGLSFYTTDKGLTEAFSQYGQVVEAT 61
Query: 82 IILDRETGRSRGFGFVTFSTVEEASSAIQALDGQVTFNASCV 123
I+ DR RS+GFGFVTF++ +EA +A+ ++G+ T N +
Sbjct: 62 IVSDRVLDRSKGFGFVTFASEDEAHNALSEMNGK-TLNGRVI 102
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 25 TAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
T+ +R+ S PS + R +++ KLFVGG+SY D L EAF++YG V EA +++
Sbjct: 11 TSNRRV-LPSLFPPPSRLVSFRAIAT-KLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVM 68
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
DR + +S+GFGFVTF++++EA +A+ ++G+
Sbjct: 69 DRVSDKSKGFGFVTFASLDEAHTALSEMNGK 99
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 112 LDGQ 115
++G+
Sbjct: 63 MNGK 66
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 14 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 73
Query: 112 LDGQ 115
++G+
Sbjct: 74 MNGK 77
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG +S+ +DD+ L + F+++G V AR++ DRETGRSRGFGFVT S +E + AI A
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 112 LDGQV 116
LDGQ+
Sbjct: 267 LDGQI 271
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
+KLFVG + Y++D L F G V A +I +RET +SRGFGFVT STVEEA +
Sbjct: 109 AKLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEA 165
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS +++VG + + +DD+ L E F+++G V +AR++ DR+TGRSRGFGFVT ++ EE A
Sbjct: 208 SSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDA 267
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 268 IAALDGQ 274
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K++VG + Y++D L + F + G V + +I +RET +SRGFGFVT ST+EE
Sbjct: 110 VEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEE 169
Query: 105 ASSAIQ 110
A A++
Sbjct: 170 AEKAVE 175
>gi|432110138|gb|ELK33915.1| Putative RNA-binding protein 3 [Myotis davidii]
Length = 123
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQV 116
++G+V
Sbjct: 67 MNGEV 71
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS +++VG + + +DD+ L + F+++G V +AR++ DRETGRSRGFGFVT ++ EE A
Sbjct: 210 SSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMASQEELDDA 269
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 270 IAALDGQ 276
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V + +I +RET +SRGFGFVT ST+EEA A++
Sbjct: 117 AKVYVGNLPYDIDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVE 176
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 112 LDGQ 115
++G+
Sbjct: 79 MNGK 82
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 112 LDGQ 115
++G+
Sbjct: 79 MNGK 82
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ KLF+GG++++ D++LRE F+K+G + EA ++ DR+T RSRGFGFV FS+ EA +
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADA 60
Query: 108 AIQALDGQ 115
A+ A++ Q
Sbjct: 61 ALNAMNNQ 68
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N ++ SL E F++YG V+E RII DR+TG SRGFGFVTF + ++A A+ +
Sbjct: 6 KLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTS 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGR 69
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 48 MSSS---KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
MSSS KLFVGG+S++ +++SL AF+KYG V +A ++ DRETGRSRGFGFVTF +
Sbjct: 1 MSSSDEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSD 60
Query: 105 ASSAIQALDGQ 115
A A+ A++G+
Sbjct: 61 AKEALHAMNGE 71
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSKLFVGG+S++ D +LR+ F +G + EA I++DRETGRSRGFGFVTF A++A+
Sbjct: 2 SSKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAV 61
Query: 110 QALDGQ 115
L+G+
Sbjct: 62 SELNGK 67
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +DD+ L + F+++G V +AR++ DRETGRSRGFGFVT +T EE A
Sbjct: 99 PSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDA 158
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 159 IAALDGQ 165
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K++VG + Y++D L + F + G V + +I +RET RSRGFGFVT STVEE
Sbjct: 1 VEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEE 60
Query: 105 ASSAIQ 110
A A++
Sbjct: 61 AEKAVE 66
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D++LR+AF+++G + ++ ++ DRETGRSRGFGFVTF T EEA +AI
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAI 61
Query: 110 QALDGQ 115
L+ Q
Sbjct: 62 NNLNEQ 67
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ DD +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ EA +A+Q
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 111 ALDGQ 115
AL+ +
Sbjct: 62 ALNNE 66
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+ QA KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF
Sbjct: 17 LPQATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFE 76
Query: 101 TVEEASSAIQALDGQ 115
+++A A+ A++G+
Sbjct: 77 NIDDAKDAMMAMNGK 91
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G R+ S PS+ +++VG + + +DD+ L E F+++G V +AR++ DR
Sbjct: 205 GSRVDRPPRQSGPSL----------RIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDR 254
Query: 87 ETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
ETGRSRGFGFVT ++ +E AI ALDGQ
Sbjct: 255 ETGRSRGFGFVTMASQDELDDAIAALDGQ 283
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RET +SRGFGFVT STVEEA A++
Sbjct: 125 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 184
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S S+LFV G+S+++D+ SL +AF+ +G V E RI+ D+ +GRSRGFGFV FS EA A
Sbjct: 46 SDSRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCA 105
Query: 109 IQALDGQVTF 118
A+DG+V
Sbjct: 106 KDAMDGKVML 115
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 54/75 (72%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+++A KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF
Sbjct: 27 LWKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFE 86
Query: 101 TVEEASSAIQALDGQ 115
+++A A+ A++G+
Sbjct: 87 NIDDAKDAMMAMNGK 101
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 66 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 125
Query: 112 LDGQ 115
++G+
Sbjct: 126 MNGK 129
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +K+F+G + + +DD SL E F +G V E +I+ DR+TGRSRGFGFVT S+ +EA A
Sbjct: 95 SHTKVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEA 154
Query: 109 IQALDG 114
+++LDG
Sbjct: 155 VKSLDG 160
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEAR-IILDRETGRSRGFGFVTFSTVEEASSAI 109
S+++VG +S+N D L + + G + ++ DRETGRSRGFG+VT ++++ A A+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 110 QALDGQV 116
Q LDG +
Sbjct: 61 QKLDGHI 67
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 48 MSSS---KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
MSSS KLFVGG+S++ ++ SL + F KYG ++E ++ DRET RSRGFGFVTF E+
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPED 60
Query: 105 ASSAIQALDGQ 115
A A++A++G+
Sbjct: 61 AKDAMEAMNGK 71
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD++L +AF++YG V E++II DRETGRSRGFGFVTFS + + AI+
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+SK++VG +S+N D +LR AF +G + ++ ++ DR+TGRSRGFGFVTF + +EA SAI
Sbjct: 2 ASKVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAI 61
Query: 110 QALDGQ 115
QAL+ Q
Sbjct: 62 QALNDQ 67
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D NSL +AF+ YG + EA+I+ DRETGRSRGFGFVTF E SAI+A
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 112 LDGQV 116
++G +
Sbjct: 69 MNGHI 73
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D NSL +AF+ YG + EA+I+ DRETGRSRGFGFVTF E SAI+A
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 112 LDGQV 116
++G +
Sbjct: 69 MNGHI 73
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D NSL +AF+ YG + EA+I+ DRETGRSRGFGFVTF E SAI+A
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 112 LDGQV 116
++G +
Sbjct: 69 MNGHI 73
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D NSL +AF+ YG + EA+I+ DRETGRSRGFGFVTF E SAI+A
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 112 LDGQV 116
++G +
Sbjct: 69 MNGHI 73
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D NSL +AF+ YG + EA+I+ DRETGRSRGFGFVTF E SAI+A
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 112 LDGQV 116
++G +
Sbjct: 69 MNGHI 73
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 25 TAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
+ G ++ ESS ++ +A KLFVGG+S++ ++ SL + F+KYG ++E ++
Sbjct: 29 SPGGPVTPESSQAHHG--KATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVK 86
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
DRET RSRGFGFVTF +++A A+ A++G+
Sbjct: 87 DRETQRSRGFGFVTFENIDDAKDAMMAMNGK 117
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
KLFVGG+S++ + SL EAF+KYG + + +I+DRETGR RGFGFV + E+A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 109 IQALDGQ 115
++ ++GQ
Sbjct: 63 MEGMNGQ 69
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M + FVGG+++ DD++L+ AF+ +G + +A+II DRETGRSRGFGFVTF+T E +
Sbjct: 1 MDEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQA 60
Query: 108 AIQALDGQ 115
AI+ ++G+
Sbjct: 61 AIEGMNGK 68
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
KLFVGG+S++ + SL EAF+KYG + + +I+DRETGR RGFGFV + E+A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 109 IQALDGQ 115
++ ++GQ
Sbjct: 63 MEGMNGQ 69
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DDN+L++AF++YG + +A+II DRETGRSRGFGFVTF + E AI+
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
QA KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +
Sbjct: 10 QAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 69
Query: 103 EEASSAIQALDGQ 115
++A A+ A++G+
Sbjct: 70 DDAKDAMMAMNGK 82
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 18/115 (15%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRC---MSSSKLFVGGISYNMDDNSLR 68
MAF S V +LR+T S Y +IR ++S KLFV G+ D L+
Sbjct: 1 MAFMSGVQRLLRRTPLVH----------SHYASIRLSSTLTSPKLFVSGLCRLTIDEKLK 50
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQVTF 118
EAF+ +G + EA++I+DR +GRS+GF FVT++T+EEA A + LDG V F
Sbjct: 51 EAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIF 105
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST E + I+
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D++LR+AF+ +G V ++ ++ DRETGRSRGFGFVTFS+ EA SAI
Sbjct: 2 STKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAI 61
Query: 110 QALDGQ 115
+L+ Q
Sbjct: 62 SSLNEQ 67
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+SY+ + SL EAF+KYG + + +I DRET RSRGFGFVTF E+A A+ A
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ KLF+GG++++ D++LR+ F+K+G + EA ++ DR+T RSRGFGFV FS EA +
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADA 60
Query: 108 AIQALDGQ 115
A+ A++ Q
Sbjct: 61 ALNAMNNQ 68
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ DD +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ EA +A+Q
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 111 ALDGQ 115
A++ +
Sbjct: 62 AMNNE 66
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ DD +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ EA +A+Q
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 111 ALDGQ 115
A++ +
Sbjct: 62 AMNNE 66
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D++ L++ F+++G V +AR++ DRETGRSRGFGFVT S E + AI A
Sbjct: 208 RIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAA 267
Query: 112 LDGQ 115
LDGQ
Sbjct: 268 LDGQ 271
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D +L F + G V + +I +R+T +SRGFGFVT STVEEA A++
Sbjct: 113 AKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVE 172
Query: 111 ALD 113
+
Sbjct: 173 KFN 175
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 25 TAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
T+ +R+ S PS + R +++ KLFVGG+SY D L EAF++YG V EA +++
Sbjct: 11 TSNRRV-LPSLFPPPSRLVSYRGIAT-KLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVM 68
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
DR + +S+GFGFVTF++++EA +A+ ++G+
Sbjct: 69 DRVSDKSKGFGFVTFASLDEAHTALSEMNGK 99
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL++AF+ +G + E++II DRETGRSRGFGFVTFS + AI A
Sbjct: 10 RCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDA 69
Query: 112 LDGQV 116
++G+V
Sbjct: 70 MNGKV 74
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
QA KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +
Sbjct: 10 QAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 69
Query: 103 EEASSAIQALDGQ 115
++A A+ A++G+
Sbjct: 70 DDAKDAMMAMNGK 82
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG V E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 112 LDGQ 115
++GQ
Sbjct: 68 MNGQ 71
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 14 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73
Query: 112 LDGQ 115
++G+
Sbjct: 74 MNGK 77
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 51/67 (76%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS +++VG + + +DD+ L E F+++G V +A+++ DR+TGRSRGFGFVT ++ EE A
Sbjct: 208 SSFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDA 267
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 268 IAALDGQ 274
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K++VG + Y++D L + F + G V + +I +RET +SRGFGFVT ST+EE
Sbjct: 110 VEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEE 169
Query: 105 ASSAIQ 110
A A++
Sbjct: 170 AEKAVE 175
>gi|197308346|gb|ACH60524.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308348|gb|ACH60525.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308350|gb|ACH60526.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308352|gb|ACH60527.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308354|gb|ACH60528.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308356|gb|ACH60529.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308358|gb|ACH60530.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308362|gb|ACH60532.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308364|gb|ACH60533.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308366|gb|ACH60534.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308368|gb|ACH60535.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308370|gb|ACH60536.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308372|gb|ACH60537.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308374|gb|ACH60538.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308376|gb|ACH60539.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308378|gb|ACH60540.1| glycine-rich RNA-binding protein [Pseudotsuga macrocarpa]
Length = 71
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG++++ DD SL+EAF+ YG V E++II DRETGRSRGFGFVTF+ + AI A
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 112 LDG 114
++G
Sbjct: 69 MNG 71
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVGG+ + MD+ L+E FA++G + +AR+ILDRETGRSRGFGFVT+ E A+ A+ L
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKAL-GL 59
Query: 113 DGQ 115
DGQ
Sbjct: 60 DGQ 62
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 48 MSSS---KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
MSSS KLFVGG+S++ ++ +L + F KYG ++E ++ DRET RSRGFGFVTF E+
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPED 60
Query: 105 ASSAIQALDGQ 115
A A++A++G+
Sbjct: 61 AKDAMEAMNGK 71
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++KLFV G+S++MD+ SL++AF+ +G V E RI+ D+++GRSRGFGFV F+ +A A
Sbjct: 43 NNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAK 102
Query: 110 QALDGQVTF 118
A+DG+
Sbjct: 103 DAMDGKAVL 111
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++++FVG + + DD SL + F+ +G V EA+++ DRETGRSRGFGFVT S+ +E A
Sbjct: 214 SANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEA 273
Query: 109 IQALDG 114
I +LDG
Sbjct: 274 ISSLDG 279
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D L E F G V +I DR+TGRSRGF FVT +T +A A++
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 112 LDG 114
+G
Sbjct: 174 FNG 176
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ KLF+GG++++ D++LRE F+++G + EA ++ DR+T RSRGFGFV FS+ EA +
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADA 60
Query: 108 AIQALDGQ 115
A+ A++ Q
Sbjct: 61 ALNAMNNQ 68
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT S V+E + AI AL
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 113 DGQ 115
DGQ
Sbjct: 61 DGQ 63
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+++L+VG + ++MDD L + F ++G VN AR+++DR++GRSRGF FV ST EEA+ A+
Sbjct: 203 ANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAM 262
Query: 110 QALDGQ 115
LDG+
Sbjct: 263 ANLDGE 268
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
QA +S+KL+VG ++++ DD L +AF+++G V A ++LDRE+GRSRGF FVT ++
Sbjct: 82 QATSTAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASP 141
Query: 103 EEASSAIQALDG 114
+ A A + LDG
Sbjct: 142 DAAEKARRGLDG 153
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS + SAI+
Sbjct: 16 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEG 75
Query: 112 LDGQ 115
++G+
Sbjct: 76 MNGK 79
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ D L EAF+++G VN A++++DRETGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAIN 62
Query: 111 ALDGQV 116
L+GQ
Sbjct: 63 GLNGQA 68
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S KLFVG + + +DD+ LREAF+KYG + +A ++ DR+TGRSRGFGFV F+ + AI
Sbjct: 5 SKKLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAI 64
Query: 110 QALDG 114
Q ++G
Sbjct: 65 QEMNG 69
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++K++VG +S+N D++LR+AF+ YG V ++ ++ DR+TGRSRGFGFVTFS+ EA+ AI
Sbjct: 2 TAKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAI 61
Query: 110 QALDGQ 115
AL+ Q
Sbjct: 62 SALNEQ 67
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS +++VG + + +DD+ L E F+++G V +AR++ DR+TGRSRGFGFVT ++ E A
Sbjct: 207 SSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDA 266
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 267 IAALDGQ 273
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V + +I +RET +SRGFGFVT ST+EEA A++
Sbjct: 115 AKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVE 174
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +DD+ L + F+++G V +AR++ DR++GRSRGFGFVT +T EE A
Sbjct: 120 PSLRVYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDA 179
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 180 IAALDGQ 186
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG I Y+ D L F K G V A +I +RET +SRGFGFVT STVEEA A++
Sbjct: 30 AKLFVGNIPYD-DSEKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVE 88
Query: 111 AL 112
L
Sbjct: 89 ML 90
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 51/65 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+ +KLFVG ++++ D NSL +AF +YG V +A ++ DRETGRSRGFGF+TFS ++A +A
Sbjct: 3 AGNKLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAA 62
Query: 109 IQALD 113
I AL+
Sbjct: 63 IDALN 67
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KLFVG + +++DD +LRE F ++G V A++I DRETGRSRGFGFV +A SAI
Sbjct: 2 STKLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAI 61
Query: 110 QALD 113
+AL+
Sbjct: 62 EALN 65
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+ ++ D+ SL EAF+KYG + + ++ DRET RSRGFGFVTF E+A A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIR---CMSSSKLFVGGISYNMDDNSLR 68
MAFFS V +L G S SS S + A+R ++S KLF+ G+S D LR
Sbjct: 1 MAFFSTVRRVLN---GSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLR 57
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQVTF 118
EAF+ +G + +A+++ DR TGRS+GF FVT+ST++EA A + LDG V F
Sbjct: 58 EAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIF 112
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 53/66 (80%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D+SLR AF+++G + ++ ++ DR+TGRSRGFGFVTFS+ EA +AI
Sbjct: 2 SAKVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAI 61
Query: 110 QALDGQ 115
+L+ Q
Sbjct: 62 TSLNEQ 67
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+ ++ D+ SL EAF+KYG + + ++ DRET RSRGFGFVTF E+A A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ +D SL +AF+++G + + +II DRETGRSRGFGFVTFS+ E +AI+
Sbjct: 6 RCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEG 65
Query: 112 LDGQ 115
++GQ
Sbjct: 66 MNGQ 69
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ DD++LR+ F ++G V EA ++ DR+TGRSRGFGFV +S+ EEA++A+
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 111 ALDGQVTFNASCV 123
++ V F+ +
Sbjct: 62 NMN-DVEFDGRRI 73
>gi|294463785|gb|ADE77417.1| unknown [Picea sitchensis]
Length = 175
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISN----PSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
M F VG + R + + S + P ++ R ++SSKLFVGG++++ D+ ++
Sbjct: 1 MEFLKHVGGLARCSLLRHHLTHQSYNGAPALPLLHVTTRGLASSKLFVGGLAWHADEKTI 60
Query: 68 REAFAKYGYVNEA--------------RIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
++AF+ YG V E RI+ DR++GRSRGFGF+ FS A A +D
Sbjct: 61 KDAFSTYGDVTEGWPTGGPVYASSNTVRIMYDRDSGRSRGFGFIHFSNESSAEDAKNGMD 120
Query: 114 GQ 115
G+
Sbjct: 121 GK 122
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y+ + +++VG + +++D+ L + F+++G V EAR++ DRETGRSRGFGFVT
Sbjct: 214 PRVYEP-----AFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVT 268
Query: 99 FSTVEEASSAIQALDGQ 115
S E + AI ALDGQ
Sbjct: 269 MSNENELNDAIAALDGQ 285
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG ++Y++D +L F + G V A +I +RET +SRGFGFVT STVEEA +A++
Sbjct: 127 AKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVE 186
Query: 111 ALD 113
+
Sbjct: 187 KFN 189
>gi|294461821|gb|ADE76469.1| unknown [Picea sitchensis]
Length = 175
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISN----PSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
M F VG + R + + S + P ++ R ++SSKLFVGG++++ D+ ++
Sbjct: 1 MEFLKHVGGLARCSLLRHHLTHQSYNGAPALPLLHVTTRGLASSKLFVGGLAWHADEKTI 60
Query: 68 REAFAKYGYVNEA--------------RIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
++AF+ YG V E RI+ DR++GRSRGFGF+ FS A A +D
Sbjct: 61 KDAFSTYGDVTEGWPTGGPVYASSNTVRIMYDRDSGRSRGFGFIHFSNESSAEDAKNGMD 120
Query: 114 GQ 115
G+
Sbjct: 121 GK 122
>gi|148702006|gb|EDL33953.1| mCG116386, isoform CRA_c [Mus musculus]
Length = 90
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ D+SL++AFA++G V A++++DRETGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 71
Query: 112 LDGQ 115
++G+
Sbjct: 72 MNGK 75
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D+SLR AF+ YG + ++ ++ DR+TGRSRGFGFVTFS+ EA +AI
Sbjct: 2 STKVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAI 61
Query: 110 QALDGQ 115
+L+ Q
Sbjct: 62 SSLNEQ 67
>gi|355715666|gb|AES05399.1| RNA binding motif protein 3 [Mustela putorius furo]
Length = 70
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS + SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+ ++ D+ SL EAF+KYG + + ++ DRET RSRGFGFVTF E+A A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 54/66 (81%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS+++ VG +S+ +DD++L+ F++ G V EA++I DR+TGRSRGFGFVT+++ E ++A
Sbjct: 133 SSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTA 192
Query: 109 IQALDG 114
I++LDG
Sbjct: 193 IESLDG 198
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ- 110
K+FVG + +N+D L F G V +I D+ TGRSRGFGFVT S+VEE +A Q
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 111 ----ALDGQV 116
LDG+
Sbjct: 99 FNNYELDGRT 108
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + D L++AF+ +G VN A+++++RETGRS+GFGFV + EA SAIQ
Sbjct: 3 NKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQ 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVG +++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFST + SAI+
Sbjct: 9 RCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 52/71 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V +A+++ DRETGRSRGFGFV+ + EE + AI A
Sbjct: 203 RAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISA 262
Query: 112 LDGQVTFNASC 122
LDGQV + A+
Sbjct: 263 LDGQVNWTAAL 273
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST
Sbjct: 99 YAAVEPPEEAKVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMST 158
Query: 102 VEEASSAIQ 110
VEEA AI+
Sbjct: 159 VEEADKAIE 167
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 71
Query: 112 LDGQ 115
++G+
Sbjct: 72 MNGK 75
>gi|77735675|ref|NP_001029535.1| putative RNA-binding protein 3 [Bos taurus]
gi|73587236|gb|AAI03474.1| RNA binding motif (RNP1, RRM) protein 3 [Bos taurus]
gi|296470723|tpg|DAA12838.1| TPA: RNA binding motif protein 3 [Bos taurus]
gi|440912765|gb|ELR62306.1| Putative RNA-binding protein 3 [Bos grunniens mutus]
Length = 90
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS+A++A
Sbjct: 7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG + +N D+SLR AF YG + ++ ++ DR+TGRSRGFGFVTF + +EA +AI
Sbjct: 2 SAKVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAI 61
Query: 110 QALDGQ 115
+L+ Q
Sbjct: 62 ISLNEQ 67
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS+SK++VG +S+N D++L + F+ YG V + ++ DRETGRSRGFGFVT+ + +EA +
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 108 AIQALDGQ 115
AI A++ Q
Sbjct: 61 AIAAMNEQ 68
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD++L AF++YG + E +II DRETGRSRGFGFVTF++ + AI A
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD+SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S++ ++ SL E F+KYG + E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + + +DD L + F+++G V +AR++ DRETGRSRGFGFVT S+ + + AI A
Sbjct: 215 RVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAA 274
Query: 112 LDGQ 115
LDGQ
Sbjct: 275 LDGQ 278
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D +L F + G V A +I +R T RSRGFGFVT ST+EE A++
Sbjct: 118 KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEM 177
Query: 112 LDG 114
G
Sbjct: 178 FSG 180
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 18/115 (15%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRC---MSSSKLFVGGISYNMDDNSLR 68
MAF +LR T S Y +IR ++S KLFV G+S D +L+
Sbjct: 1 MAFLYGAQRLLRHTPLVH----------SHYASIRLSSTLTSPKLFVSGLSRLTKDENLK 50
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQVTF 118
EAF+ +G + EA++I DR +GRS+GF FVT++T+EEA A + LDG V F
Sbjct: 51 EAFSSFGQLVEAKVITDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIF 105
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+ ++ D+ SL EAF+KYG + + ++ DRET RSRGFGFVTF E+A A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS+SK++VG +S+N D++L + F+ YG V + ++ DRETGRSRGFGFVT+ + +EA +
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 108 AIQALDGQ 115
AI A++ Q
Sbjct: 61 AIAAMNEQ 68
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 16/115 (13%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIR---CMSSSKLFVGGISYNMDDNSLR 68
MAFF +LR + +S S + +IR ++S KLF+ G+S D L
Sbjct: 1 MAFFFGFHRLLRHSQSPLVS--------SHFTSIRLNSTLTSPKLFISGLSRLTTDEKLT 52
Query: 69 EAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA-----LDGQVTF 118
EAF+ +G + EA++I DR +GRS+GF FV++ST+EEA A + LDG V F
Sbjct: 53 EAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIF 107
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|357131533|ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFV G+S++ D+ SL +AF+ +G V E RI+ D+ +GRSRGFGFV FS EA A A
Sbjct: 48 KLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCAKDA 107
Query: 112 LDGQVTFNASC 122
+DG+V S
Sbjct: 108 MDGKVMLGRSL 118
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 52/66 (78%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++KLFV G+S+++D+ SL++AF+ +G V E RI+ D+++GRSRGFGFV FS +A SA
Sbjct: 37 NTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAK 96
Query: 110 QALDGQ 115
A+DG+
Sbjct: 97 DAMDGK 102
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
KLFVGG+S++ + SL EAFAKYG + + +I D+ETGRSRGFGFV + E+A A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 109 IQALDGQ 115
++ ++G+
Sbjct: 63 LEGMNGK 69
>gi|160872542|ref|ZP_02062674.1| RNA-binding protein [Rickettsiella grylli]
gi|159121341|gb|EDP46679.1| RNA-binding protein [Rickettsiella grylli]
Length = 133
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ +L+VGG+SY++DD+ LRE F +G V+ ++I D +GRS+GFGFV ST EEA AI
Sbjct: 2 NKRLYVGGLSYSVDDDGLRELFTPFGTVSFVKVIRDFHSGRSKGFGFVEMSTPEEAKEAI 61
Query: 110 QALDGQV 116
+AL G +
Sbjct: 62 EALHGSI 68
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ ++ SL EAF KYG + + +I D+ETGRSRGFGFV + +VE+A A+ A
Sbjct: 6 KLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS+SK++VG +S+N D++L + F+ YG V + ++ DRETGRSRGFGFVT+ + +EA +
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 108 AIQALDGQ 115
AI A++ Q
Sbjct: 61 AIAAMNEQ 68
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D +LRE F+KYG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 111 ALDGQ 115
A+ Q
Sbjct: 62 AMSNQ 66
>gi|197102777|ref|NP_001124733.1| RNA binding motif (RNP1, RRM) protein 3 [Pongo abelii]
gi|55725705|emb|CAH89634.1| hypothetical protein [Pongo abelii]
Length = 90
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 15/114 (13%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQAIRC--MSSSKLFVGGISYNMDDNSLRE 69
MAF V + R AG S +S+PS + RC ++S +LFV G+S + L++
Sbjct: 1 MAF---VSSFRRLVAGS----NSLLSSPS-FCVRRCSTLTSPRLFVSGLSRLTTNEKLQD 52
Query: 70 AFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA-----IQALDGQVTF 118
AFA +G + +AR+I DRETGRS+GFGFVT++T+E+A A + LDG V F
Sbjct: 53 AFASFGQLVDARVITDRETGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIF 106
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL +AF+ +G V E++I+ DRETGRSRGFGFVTFS + AI+A
Sbjct: 9 RCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEA 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 34 SSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRG 93
+ I +PS+ R ++ KLFVGG+S+ +N+L EAF+ YG V EA+I+ DR + RS+G
Sbjct: 13 NKILSPSLLSFRRGIAY-KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKG 71
Query: 94 FGFVTFSTVEEASSAIQALDGQVTFNASCV 123
FGFVTF++ +EA +AI+ + G+ T N +
Sbjct: 72 FGFVTFASQDEAENAIEDMKGK-TLNGRVI 100
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 6/76 (7%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD++L+ AF++YG + +A+II DRETGRSRGFGFVTF + E AI+
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 112 LDG------QVTFNAS 121
++G QVT N +
Sbjct: 67 MNGKELDGRQVTVNEA 82
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 6/77 (7%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
S Y RC FVGG+++ DD++L +AF+ YG + E++II DRETGRSRGFGFVT
Sbjct: 2 ASAYVEYRC------FVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVT 55
Query: 99 FSTVEEASSAIQALDGQ 115
F++ AI+ ++GQ
Sbjct: 56 FASENSMKDAIEGMNGQ 72
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 40 SIYQAIRCMSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
S+ I MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+
Sbjct: 50 SVGLEITAMSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFI 109
Query: 98 TFSTVEEASSAIQALDGQ 115
TF+ E AS A++A++G+
Sbjct: 110 TFTNPEHASDAMRAMNGE 127
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ DD +LR F ++G V EA ++ DR+TGRSRGFGFV ++ EA +A+Q
Sbjct: 2 AKLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQ 61
Query: 111 ALDGQ 115
A++ +
Sbjct: 62 AMNNE 66
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E +I DRET RSRGFGFVTF +EA A+ A
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ DD +LR F ++G V EA ++ DR+TGRSRGFGFV ++ EA +A+Q
Sbjct: 2 AKLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQ 61
Query: 111 ALDGQ 115
A++ +
Sbjct: 62 AMNNE 66
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S+ DD SL EAF K+G V +++II DRETGRSRGFGFVTF+ + AI
Sbjct: 7 RCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDE 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 34 SSISNPSIYQAIRCMSS----SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETG 89
SSI +P + + MSS +KLFVG +++ D SL+ AF ++G V +A ++ DRETG
Sbjct: 14 SSILHP---RTLSSMSSPPGGNKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETG 70
Query: 90 RSRGFGFVTFSTVEEASSAIQALDGQ 115
RSRGFGF+TF A AI+AL+GQ
Sbjct: 71 RSRGFGFITFKEEAAAPGAIEALNGQ 96
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR+ F K+G + EA +I DR+T RSRGFGFV F+T EA +AI
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 GMNNQ 66
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E +I DRET RSRGFGFVTF +EA A+ A
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KL+VGG+S++ D +LR +F +G V+EA +++DR TG+SRGFGFVTF+ A +AI
Sbjct: 2 STKLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAI 61
Query: 110 QALDG 114
A++G
Sbjct: 62 SAMNG 66
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AF++YG + E +II DRETGRSRGFGFVTF++ + AI+
Sbjct: 45 RCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEG 104
Query: 112 LDGQ 115
++GQ
Sbjct: 105 MNGQ 108
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + DN L +AF+++G V AR++++R+TGRS+GFGFV ++ EA +AIQ
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSLV 75
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + DN L +AF+++G V AR++++R+TGRS+GFGFV ++ EA +AIQ
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSLV 75
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAFAKYG + + +I D+ETGRSRGFGFV + E+A A++
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 54/66 (81%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D++LR+AF+++G V ++ ++ DR+TGRSRGFGFVTFS+ +EA +AI
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAI 61
Query: 110 QALDGQ 115
L+ Q
Sbjct: 62 GGLNEQ 67
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG I + +D+ L + F++YG V EARI+ DRETGRSRGFGFVT S+ E AI A
Sbjct: 231 RVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEMEDAIAA 290
Query: 112 LDG 114
LDG
Sbjct: 291 LDG 293
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + ++++ L + F K G V A +I +RET +SRGFGFV+ STVEE AI+
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 112 LD 113
D
Sbjct: 197 FD 198
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+++G + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG +S+N D SLR AF+ YG + ++ ++ DR+TGRSRGFGFVTFS+ EA +AI
Sbjct: 2 SAKVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAI 61
Query: 110 QALDGQ 115
+L+ Q
Sbjct: 62 ASLNEQ 67
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + DN L +AF+++G V AR++++R+TGRS+GFGFV ++ EA +AIQ
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQ 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSLV 75
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 47 CMSSS--KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E
Sbjct: 25 AMSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEH 84
Query: 105 ASSAIQALDGQ 115
AS A++A++G+
Sbjct: 85 ASDAMRAMNGE 95
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+++G + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+KL+VG + Y + DN L +AF ++G V AR++++R+TGRS+GFGFV ++ EA +AI
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 110 QALDGQVTFNASCV 123
Q ++GQ S V
Sbjct: 62 QGMNGQPLGGRSLV 75
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M + FVGG+++ DD SL AF +G + +A++I DRETGRSRGFGFVTF+T + +
Sbjct: 1 MEEYRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQN 60
Query: 108 AIQALDGQ 115
AI A++G+
Sbjct: 61 AINAMNGK 68
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DN+L EAF++YG V E++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D ++L +AF+ YG + E+++I+DRETGRSRGFGFVTF++ + AI+
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
KLFVGG+S++ + SL EAFAKYG + + +I D+ETGRSRGFGFV + E+A A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 109 IQALDGQ 115
+ ++G+
Sbjct: 63 LDGMNGK 69
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 28 KRISCESSISNPSIY-----QAIRCM--SSSKLFVGGISYNMDDNSLREAFAKYGYVNEA 80
+R+ C +S S S + R M S+ LFV G++ LRE FAK+G V A
Sbjct: 14 RRLFCTNSTSPSSPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHA 73
Query: 81 RIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
R++ DR +G S+GFGFV ++T+EEAS IQ +DG+
Sbjct: 74 RVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGK 108
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S KLF+G ++Y D+SLR FA+ G V EA+++ DR++GRS+GFGFVT+ E+A +AI
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAI 61
Query: 110 QALD 113
+ LD
Sbjct: 62 KELD 65
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS+A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
PS+++ + +++VG + + +DD L + F+++G V AR++ DRETGRSRGFGFVT
Sbjct: 184 PSVFKI-----AYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVT 238
Query: 99 FSTVEEASSAIQALDGQ 115
S+ E + AI ALDGQ
Sbjct: 239 MSSETELNDAIAALDGQ 255
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 33 ESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSR 92
E S + S +KL+VG + Y+++ +L + F + G V A II +RET +SR
Sbjct: 80 EESFGDGSEETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRETDQSR 139
Query: 93 GFGFVTFSTVEEASSAIQ 110
GFGFVT STV+EA AI+
Sbjct: 140 GFGFVTMSTVDEAEKAIE 157
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
+ +++FVGG+ +++ ++ LRE F+KYG V +AR++++RETGRSRGFGFV+++
Sbjct: 3 AVEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVE 62
Query: 107 SAIQALDGQ 115
I ALDGQ
Sbjct: 63 ECIAALDGQ 71
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + DN L +AF+++G V AR++++R+TGRS+GFGFV + EA +A+Q
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQ 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSLV 75
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y + DN L +AF+++G V AR++++R+TGRS+GFGFV + EA +A+Q
Sbjct: 3 NKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQ 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSLV 75
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ D SL+ AF+++G V A++++DRETGRS+GFGFV T EA +AI
Sbjct: 3 NKLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P + Q S + +VG + +++D++SL + F+++G V A+++ DRETGR RGFGFVT
Sbjct: 204 PRLRQPRTFNSGLRAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRLRGFGFVT 263
Query: 99 FSTVEEASSAIQALDGQVTFNASCV 123
S E + AI ALDGQ +FN +
Sbjct: 264 MSNEAEMNDAIAALDGQ-SFNGRAI 287
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D L + F + G V A +I +R+T RSRGFGFVT ST EE A+
Sbjct: 123 KIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAVNK 182
Query: 112 LDG 114
G
Sbjct: 183 FSG 185
>gi|337278094|ref|YP_004617565.1| RNA-binding protein [Ramlibacter tataouinensis TTB310]
gi|334729170|gb|AEG91546.1| Candidate RNA-binding protein [Ramlibacter tataouinensis TTB310]
Length = 95
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D+ +++AF+++G V A++++DR+TGRS+GFGFV + EA SAIQ
Sbjct: 3 NKLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSAIQ 62
Query: 111 ALDGQ 115
+ GQ
Sbjct: 63 GMHGQ 67
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D L + F+++G V EAR++ DRETGRSRGFGFVT S+ E AI A
Sbjct: 222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 281
Query: 112 LDGQ 115
DGQ
Sbjct: 282 TDGQ 285
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVG + Y++D L F + G V A +I +RET RSRGFGFV+ STVEEA A+
Sbjct: 127 AKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVD 186
Query: 111 -----ALDGQV 116
LDG++
Sbjct: 187 MFHRYELDGRL 197
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S +++VG + +++D++ L + F+++G V +AR++ DRETGRSRGFGFVT S+ + + AI
Sbjct: 216 SFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAI 275
Query: 110 QALDGQ 115
ALDGQ
Sbjct: 276 AALDGQ 281
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + ++ D L F + G V A +I +R T RSRGFGFVT ST+EE A++
Sbjct: 125 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 184
Query: 112 LDG 114
G
Sbjct: 185 FSG 187
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 30 ISCESSISNPSIYQAIRCMS-SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRET 88
+S ++P + S + KL+VG +SYN ++SLR F+ +G V A+II DRET
Sbjct: 2 VSWNRITAHPDAFPGEGIFSMAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRET 61
Query: 89 GRSRGFGFVTFSTVEEASSAIQALDGQ 115
G S+GFGFV ST EEAS+AI +G+
Sbjct: 62 GNSKGFGFVEMSTDEEASAAIAGTNGR 88
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D L + F+++G V EAR++ DRETGRSRGFGFVT S+ E AI A
Sbjct: 243 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 302
Query: 112 LDGQV 116
DGQ
Sbjct: 303 TDGQT 307
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVG + Y++D L F + G V A +I +RET RSRGFGFV+ STVEEA A+
Sbjct: 148 AKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVD 207
Query: 111 -----ALDGQV 116
LDG++
Sbjct: 208 MFHRYELDGRL 218
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD++L+ AF++YG + +A+II DRETGRSRGFGFVTF + E AI+
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S +++VG + +++D++ L + F+++G V +AR++ DRETGRSRGFGFVT S+ + + AI
Sbjct: 214 SFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAI 273
Query: 110 QALDGQ 115
ALDGQ
Sbjct: 274 AALDGQ 279
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + ++ D L F + G V A +I +R T RSRGFGFVT ST+EE A++
Sbjct: 123 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 182
Query: 112 LDG 114
G
Sbjct: 183 FSG 185
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+SKLFVGG+S+ + L EAF+K G V EA+I++DR + RS+GFGFVTF++V+EA A+
Sbjct: 33 ASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKAL 92
Query: 110 QALDGQVTFNASCV 123
+GQ FN +
Sbjct: 93 MEFNGQ-QFNGRVI 105
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL EAF++YG V E++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEG 68
Query: 112 LDGQV 116
++GQ
Sbjct: 69 MNGQT 73
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
+ S LFV G+S + LREAFAK+G V AR+I DR TG S+GFGFV + TVE+A
Sbjct: 43 KADPSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDA 102
Query: 106 SSAIQALDGQ 115
+ I+ +DG+
Sbjct: 103 AKGIEGMDGE 112
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + +++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F +YG V EA ++ DR+TGRSRGFGFV ++ ++A AI
Sbjct: 57 SKLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAIT 116
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 117 AMN-NVEFDGRTI 128
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG + E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+ G+S + L+EAFAK+G V AR++ DR TG S+GFGFV ++TVE+A+ I
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGI 94
Query: 110 QALDGQVTF 118
+ +DG+V F
Sbjct: 95 EGMDGKVCF 103
>gi|59802525|gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 46 RCMS-SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
RC + KL+VG + Y + D LR F YG V A++I+DR+TGRS+GFGFV ++ +E
Sbjct: 58 RCETVGKKLYVGNLGYGVTDEQLRGMFGPYGSVQTAQVIMDRDTGRSKGFGFVEMNSDQE 117
Query: 105 ASSAIQALDGQVT 117
A +AI ++GQ++
Sbjct: 118 AQAAIAGMNGQMS 130
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LRE F++YG + EA ++ D +T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR+ F YG V EA ++ DR+T RSRGFGFV FS+ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG + E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ +++SL AF KYG + + +I D+ETGRSRGFGFV + VE+A A+ A
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDA 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKT 70
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS+KL+VG +++ +D+++L F++ G V +A++I DRE+GRSRGFGFVT+ + EE ++A
Sbjct: 173 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 232
Query: 109 IQALDG 114
I LDG
Sbjct: 233 ISNLDG 238
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D L F + G V ++ DR+TGRSRGFGFVT ST EEA +A++
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135
Query: 112 LDG 114
+G
Sbjct: 136 FNG 138
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS+KL+VG +++ +D+++L F++ G V +A++I DRE+GRSRGFGFVT+ + EE ++A
Sbjct: 178 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 237
Query: 109 IQALDG 114
I LDG
Sbjct: 238 ISNLDG 243
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D L F + G V ++ DR+TGRSRGFGFVT ST EEA +A++
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 112 LDG 114
+G
Sbjct: 141 FNG 143
>gi|376316225|emb|CCF99622.1| RNA recognition motif-containing protein [uncultured Flavobacteriia
bacterium]
Length = 83
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG +++ +DD LREAF +G V+ AR+I DRETGRSRGFGFV EEA +A+ +
Sbjct: 3 IFVGNLAWGVDDVVLREAFEAFGAVDSARVITDRETGRSRGFGFVEMPNQEEAQAALDGM 62
Query: 113 DGQ 115
+G+
Sbjct: 63 EGK 65
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
PS Q S+ LFV G+S L EAFAK+G V AR++ DR TG S+GFGFV
Sbjct: 67 PSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVK 126
Query: 99 FSTVEEASSAIQALDGQ 115
++T+E+A+ I+ +DG+
Sbjct: 127 YATLEDAAKGIEGMDGK 143
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ + SL EAFAKYG + + +I D+ETGRSRGFGFV + E+A A+
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSKL+VG + Y+++D+SLR F+++G V A+++ DR++GRS+GFGFV ++ EA +AI
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAI 61
Query: 110 QALDGQ 115
L+GQ
Sbjct: 62 NGLNGQ 67
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ D++LR F K+G + EA +I DR+T RSRGFGFV FST EA +AI+
Sbjct: 2 AKLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIE 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 GMNNQ 66
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
+ KLFVG +++ D SL+ AF ++G V +A ++ DRETGRSRGFGF+TF +A
Sbjct: 4 APAGGKLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAP 63
Query: 107 SAIQALDGQ 115
AI+AL+GQ
Sbjct: 64 GAIEALNGQ 72
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 158
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFVGG++++ DD +LR F ++G V EA ++ DR+TGRSRGFGFV F+ +A++A+
Sbjct: 2 SKLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMN 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ D+ LRE F++YG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL EAF++YG + E++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEG 68
Query: 112 LDGQV 116
++GQ
Sbjct: 69 MNGQT 73
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR+ F YG V EA ++ DR+T RSRGFGFV FS+ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|291233342|ref|XP_002736613.1| PREDICTED: dynein heavy chain at 36C-like [Saccoglossus kowalevskii]
Length = 5501
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 31 SCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGR 90
S S+ NP+ + ++++FVGGI+Y+ +D++L+E F+K+G+V EA+II DR G
Sbjct: 5197 SKSSTPDNPTHAPRFGTLIANRIFVGGITYDTNDSALKEYFSKFGHVKEAKIICDR-AGV 5255
Query: 91 SRGFGFVTFSTVEEAS 106
S+G+GF+TF T EEA+
Sbjct: 5256 SKGYGFITFETQEEAT 5271
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++K++VG +S+N D+SL AF+ +G + + ++ DRETGRSRGFGFVTF+T EA +AI
Sbjct: 2 AAKVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAI 61
Query: 110 QALDGQ 115
AL+ Q
Sbjct: 62 AALNEQ 67
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG I +++DD L + F+++G V AR++ DRE+GRSRGFGFVT S+ E S AI
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 112 LDGQV 116
LDGQ
Sbjct: 252 LDGQT 256
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+KLFVG + Y++D L + F + G V A +I +RET RSRGFGFVT STVEEA A+
Sbjct: 96 DAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAV 155
Query: 110 Q 110
+
Sbjct: 156 E 156
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++K++VG +S+N D+SL AF+ YG + + ++ DRETGRSRGFGFVTF+T EA +AI
Sbjct: 2 AAKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAI 61
Query: 110 QALDGQ 115
AL+ Q
Sbjct: 62 AALNEQ 67
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG + E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS+A++A
Sbjct: 7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
+ S LFV G+S + LREAFAK+G V AR++ DR TG S+GFGFV +++VE+A
Sbjct: 43 KADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDA 102
Query: 106 SSAIQALDGQ 115
S I+ +DG+
Sbjct: 103 SKGIEGMDGK 112
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ +A +++ KL+VG + + ++ LR+ FA +G V A ++ D+ T RSR FGFVT
Sbjct: 56 AVLEAPEVVAARKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTM 115
Query: 100 STVEEASSAIQALDG 114
STVEEA++A++AL+G
Sbjct: 116 STVEEANAAVEALNG 130
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S K++VG ++ N+ L+ F++ G + A + T +S+G+GFVTFS+ EE +A
Sbjct: 164 SQYKVYVGNLAKNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAA 223
Query: 109 IQA-----LDGQ 115
+ L+GQ
Sbjct: 224 VATFNNAELEGQ 235
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D+N+LR+ F ++G V EA ++ DR+TGRSRGFGFV + +A +AI
Sbjct: 2 SKLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAIT 61
Query: 111 ALDGQVTFNASCV 123
A++ + F+ +
Sbjct: 62 AMN-NIEFDGRTI 73
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFVGG++++ D +LR+ F KYG + EA ++ DR+T RSRGFGFV FS EA +A+
Sbjct: 2 SKLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMN 61
Query: 111 ALDGQ 115
A+ Q
Sbjct: 62 AMSNQ 66
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S K++VG + Y++ D SLR FA++G V ++I+ DRETGRS+GFGFV S+ E+A SAI
Sbjct: 2 SCKIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAI 61
Query: 110 QALDG 114
L+G
Sbjct: 62 TGLNG 66
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D L + F+++G V EAR++ DRETGRSRGFGFVT S+ E AI A
Sbjct: 1038 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 1097
Query: 112 LDGQ 115
DGQ
Sbjct: 1098 TDGQ 1101
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVG + Y++D L F + G V A +I +RET RSRGFGFV+ STVEEA A+
Sbjct: 943 AKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVD 1002
Query: 111 -----ALDGQV 116
LDG++
Sbjct: 1003 MFHRYELDGRL 1013
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ D+ LRE F++YG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 190
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+ +K FV I +++DD L+E F+ +G V + RI+ D E+GRSRG GFVTF+T +EA++A
Sbjct: 116 NPAKCFVANIPWSVDDQGLQEFFSSHGTVVDCRILTDAESGRSRGIGFVTFATPDEANNA 175
Query: 109 IQALDG 114
I ALDG
Sbjct: 176 ISALDG 181
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
++KL+VG I++N+D L + F G ++ DR G+SRGF FVT ST + A +A
Sbjct: 16 PNTKLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRGFAFVTLSTEDAAKTA 75
Query: 109 IQALDGQ 115
I+ LDG
Sbjct: 76 IEKLDGH 82
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 22 LRQTAGKRISCESSI-----SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGY 76
LR+ AG++ SSI + P+ + ++KLFVGG+S +N L EAF++YG
Sbjct: 5 LRRIAGEKSFMLSSIRAKLVAAPTALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQ 64
Query: 77 VNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
V EA+I++DR RS+GFGFVT+++ +EA A+ ++G+
Sbjct: 65 VVEAKIVMDRALDRSKGFGFVTYASEDEAQKALDEMNGK 103
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KL++G +S+N D++LR A ++G + ++ ++ DR+TGRSRGFGFVTF +VEEA +A+
Sbjct: 2 SAKLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAV 61
Query: 110 QALDGQ 115
L+ Q
Sbjct: 62 NGLNEQ 67
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AF++YG V +++II DRETGRSRGFGFVTF + AI+A
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEA 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S +++VG I + +DD L + F+++G V AR++ DRETGRSRGFGFVT ++ E S AI
Sbjct: 229 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 288
Query: 110 QALDGQ 115
LDGQ
Sbjct: 289 ANLDGQ 294
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L F + G V A +I +R+T +SRGFGFVT STVEEA A++
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSTFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|313240807|emb|CBY33099.1| unnamed protein product [Oikopleura dioica]
Length = 252
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVGG+ Y+ D+SLR+ F YG + EA +I DR+TG+SRG+GFVT + E+A AIQ
Sbjct: 13 TKIFVGGLPYHTTDDSLRQFFDVYGDIEEAVVITDRQTGKSRGYGFVTMAKKEDAQKAIQ 72
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS+KL+VG +++ +D+++L F++ G V +A++I DRE+GRSRGFGFVT+ + EE ++A
Sbjct: 119 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 178
Query: 109 IQALDG 114
I LDG
Sbjct: 179 ISNLDG 184
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D L F + G V ++ DR+TGRSRGFGFVT ST EEA +AI+
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 112 LDG 114
+G
Sbjct: 82 FNG 84
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ ++L+VG + + + +N LRE F +YG VNE +I+D+ TG+SRGF FVT T + A S
Sbjct: 1 MNRTRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQS 60
Query: 108 AIQALDG 114
AI +L+G
Sbjct: 61 AIDSLNG 67
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ +L + F+KYG ++E ++ DRET RSRGFGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|355704773|gb|EHH30698.1| RNA-binding motif protein 3 [Macaca mulatta]
Length = 157
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|297263082|ref|XP_001089948.2| PREDICTED: putative RNA-binding protein 3 [Macaca mulatta]
Length = 135
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDG 114
++G
Sbjct: 67 MNG 69
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + + +DD L + F+++G V +AR++ DRETGRSRGFGFVT S+ + + AI A
Sbjct: 215 RVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAA 274
Query: 112 LDGQVT 117
LD +VT
Sbjct: 275 LDVRVT 280
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + +++D +L F + G V A +I +R T RSRGFGFVT ST+EE A++
Sbjct: 118 KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEM 177
Query: 112 LDG 114
G
Sbjct: 178 FSG 180
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+SKLFVGG+S+ + L E F++YG V EA+I++DR + RS+GFGFVTF++ EEA A
Sbjct: 33 ASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKAR 92
Query: 110 QALDGQ 115
+DG+
Sbjct: 93 TEMDGK 98
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ +L +AF++YG + +++II DRETGRSRGFGFVTF+ + + AI+A
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 19 GNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVN 78
G +++ AG R + E + KL+VG +S+ + D+ L++ F YG V
Sbjct: 21 GKLIQAAAGDRAAGEFVVGK-------------KLYVGNLSWGVTDSQLQDMFTPYGSVV 67
Query: 79 EARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
A++I+DR+TGRS+GFGFV T +EA +AI + GQV
Sbjct: 68 SAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITGMHGQV 105
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
++S KLFV G+S D L+EAF+ +G + EA++I DR +GRS+GFGFVT++T+EEA
Sbjct: 30 TVTSPKLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAE 89
Query: 107 SAIQA-----LDGQVTF 118
A + LDG V F
Sbjct: 90 KAREGMNAKFLDGWVIF 106
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFVGG++++ D +LR F KYG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L EAF+ YG V E++II DRETGRSRGFGFVTF+ + AI+
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L EAF+ YG V E++II DRETGRSRGFGFVTF+ + AI+
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 52/64 (81%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++++G +S+++++ L E F+++G + +A+I+ DRETGRSRGFGF+TFST EA +A+ +
Sbjct: 217 RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVAS 276
Query: 112 LDGQ 115
L+G+
Sbjct: 277 LNGK 280
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 39 PSIYQAIRCMSS-SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
P I + + + + +K+++G + ++ D L ++G V +I D+ TGRSRGF F
Sbjct: 98 PEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFA 157
Query: 98 TFSTVEEASSAIQALDG 114
T S+VE+A++ ++ LDG
Sbjct: 158 TMSSVEDANALVENLDG 174
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFVGG++++ D +LR F KYG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ + LREAF+K+G V EAR+I DR +G SRGFGFV ++TVEEA I+ +
Sbjct: 42 LFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 101
Query: 113 DGQ 115
DG+
Sbjct: 102 DGK 104
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSR FGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+++K+F+G +S++ D ++L + F++YG V +A+++ DR+TG+SRGFGFVT S E S+A
Sbjct: 112 NTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNA 171
Query: 109 IQALDG 114
+Q LDG
Sbjct: 172 VQNLDG 177
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG + + D L E V ++ D+++GRSRGF FVT ST E A S I
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 112 LDG 114
LDG
Sbjct: 61 LDG 63
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AFA+YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AFA+YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AFA+YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AFA+YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M++ K+FVG +SYN ++ LR+ F+ G V E II DRETGRSRGF FVTFS+ EA+
Sbjct: 1 MANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEAND 60
Query: 108 AIQALD 113
AI+ L+
Sbjct: 61 AIENLN 66
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D ++L +AF+++G + E+++I DRETGRSRGFGFVTF+T + AI+
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D L + F+++G V AR++ DRET RSRGFGFVT ST E + AI A
Sbjct: 244 RIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAA 303
Query: 112 LDGQ 115
LDGQ
Sbjct: 304 LDGQ 307
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K+FVG + Y++D L F + G V A +I +RET SRGFGFVT STVEE
Sbjct: 143 VEPPEEAKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEE 202
Query: 105 ASSAIQAL 112
+ A++ L
Sbjct: 203 SEKAVEML 210
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 LDGQV 116
L +V
Sbjct: 96 LPHKV 100
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 21 ILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEA 80
+ + G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG +
Sbjct: 96 LPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155
Query: 81 RIILDRETGRSRGFGFVTFS 100
++ DR++G+ RGF FVTF
Sbjct: 156 EVMEDRQSGKKRGFAFVTFD 175
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+++G +SY + D L+E FA+YG VN ++ DRETGR RGF FV S+ +E ++AI+AL
Sbjct: 3 IYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++VG + +++D+ L + F+++G V +AR++ DR+TGRSRGFGFVT ST E + AI A
Sbjct: 236 RIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAA 295
Query: 112 LDGQ 115
LDG+
Sbjct: 296 LDGR 299
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVG + Y++D L F + G V A +I +RET SRGFGFV+ STVEEA A++
Sbjct: 141 AKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVE 200
Query: 111 A-----LDGQV 116
LDG++
Sbjct: 201 MFHRHDLDGRL 211
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 27 GKRISCESSISNPSIYQAIRC--MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
G++++ + S +A R S +++VG + +++D + L + F+++G V AR++
Sbjct: 123 GRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVS 182
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
DRETGRSRGFGFVT S+ E + AI ALDGQ
Sbjct: 183 DRETGRSRGFGFVTMSSESEVNDAIAALDGQT 214
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L F G V A +I +RET RSRGFGFVT STVEEA A++
Sbjct: 55 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 114
Query: 111 ALDG------QVTFNASC 122
L+G Q+T N +
Sbjct: 115 LLNGYDMDGRQLTVNKAA 132
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 45 IRCMSSS--KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
I MSS KLFVGG++++ D+ L + F+ +G ++E +I D+ET RSRGFGF+TF+
Sbjct: 77 ITIMSSEEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANP 136
Query: 103 EEASSAIQALDGQ 115
E AS A++A++G+
Sbjct: 137 EHASDAMRAMNGE 149
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+++ +++ L +AF KYG ++E ++ DRET RSRGFGFVTF V++A A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 49/66 (74%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+SKLF+GG+S+ + L EAF+K G V EA+I++DR + RS+GFGFVTF++ +EA A+
Sbjct: 33 ASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKAL 92
Query: 110 QALDGQ 115
+GQ
Sbjct: 93 MEFNGQ 98
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS++++VG +S+N+DD++L F + G V +A+++ DR++GRS+GFGFVT+S+ EE A
Sbjct: 200 SSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVEDA 259
Query: 109 IQALDG 114
+ +L+G
Sbjct: 260 VDSLNG 265
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LFVG + +N++ L + F G V + D+ TGRSRGFGFVT ST+EE +A Q
Sbjct: 92 QLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQ 151
Query: 112 LDG 114
+G
Sbjct: 152 FNG 154
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 27 GKRISCESSISNPSIYQAIRC--MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
G++++ + S +A R S +++VG + +++D + L + F+++G V AR++
Sbjct: 116 GRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVS 175
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
DRETGRSRGFGFVT S+ E + AI ALDGQ
Sbjct: 176 DRETGRSRGFGFVTMSSESEVNDAIAALDGQT 207
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L F G V A +I +RET RSRGFGFVT STVEEA A++
Sbjct: 48 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 107
Query: 111 ALDG------QVTFNASC 122
L+G Q+T N +
Sbjct: 108 LLNGYDMDGRQLTVNKAA 125
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M++ K+FVG +SYN ++ LR+ F+ G V E II DRETGRSRGF FVTFS+ EA+
Sbjct: 1 MANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEAND 60
Query: 108 AIQALD 113
AI+ L+
Sbjct: 61 AIENLN 66
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 19 GNILRQTAGKRISCESSISNPSIYQAI----RCMSSSKLFVGGISYNMDDNSLREAFAKY 74
G LR +G ESS S + + ++L+VG +S+++D+ +L F++
Sbjct: 160 GRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQ 219
Query: 75 GYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
G V +A+++ DRE+GRSRGFGFVT+S+ EE +AI +L+G
Sbjct: 220 GKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNG 259
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L F G V +I D+ TGRSRGFGFVT S+++E +A Q
Sbjct: 93 KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152
Query: 112 LDG 114
+G
Sbjct: 153 FNG 155
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ +++SL AF KYG + + +I D+ETGRSRGFGFV + E+A A+ A
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDA 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKT 70
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + +++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|160901477|ref|YP_001567059.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333917515|ref|YP_004491247.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160367061|gb|ABX38674.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333747715|gb|AEF92892.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 124
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y D+ L +AF+++G VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYTFRDSDLEQAFSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
L GQ
Sbjct: 63 GLHGQ 67
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+ FVGG+++ D+++L +AF++YG + +++II DRETGRSRGFGFVTF+ + + I+
Sbjct: 6 DRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIE 65
Query: 111 ALDGQ 115
A++GQ
Sbjct: 66 AMNGQ 70
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+++ +++ L +AF KYG ++E ++ DRET RSRGFGFVTF V++A A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLF+GG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFIGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|332531199|ref|ZP_08407112.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332039306|gb|EGI75719.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 131
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ DN L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLAYSIRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQ 115
L+GQ
Sbjct: 63 GLNGQ 67
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +SL AF+ YG V E++IILDRET RSRGFGFVTFS SAI+
Sbjct: 18 RCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 112 LDGQ 115
++G+
Sbjct: 78 MNGK 81
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ D+ SL E F++YG ++E R+I DR+T SRGFGF+TF +A A+ A
Sbjct: 6 KLFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|351702148|gb|EHB05067.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 181
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 32 SKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVETAMC 91
Query: 111 ALDGQV 116
L +V
Sbjct: 92 TLPHKV 97
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS ++VG + +++D+ L++ F+K+G V AR++ DRE+GRSRGFGFVT S E + A
Sbjct: 203 SSLSIYVGNLPWDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDA 262
Query: 109 IQALDGQ 115
+ ALDG+
Sbjct: 263 VAALDGE 269
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +KLFVG + Y++D L F + G V A +I +RET +SRGFGFVT STVEE
Sbjct: 103 VEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEE 162
Query: 105 ASSAIQALD 113
A SA++ +
Sbjct: 163 AESAVEKFN 171
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSRG GFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + +++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + +++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AF++YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|357472741|ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 112
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P + +R SS+KLF+ G+SYN ++ LR+ F ++G + E ++I + TG S+G+GFV
Sbjct: 21 PQLLLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVR 80
Query: 99 FSTVEEASSAIQALDGQV 116
F++ A++A + L GQ+
Sbjct: 81 FNSETAAATARKELHGQI 98
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +DD L + F+++G V +AR++ DR+T RSRGFGFVT S+ E + A
Sbjct: 185 PSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDA 244
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 245 IAALDGQ 251
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L + F + G V A +I +RET +SRGFGF+T STVEEA A++
Sbjct: 93 AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 152
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L EAF+ +G + E++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
R SS + +VG + + +D+ L + F+++G V A I+ DRETGRSRGFGFVT ++ E+
Sbjct: 194 RFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDL 253
Query: 106 SSAIQALDGQ 115
SAI ALDGQ
Sbjct: 254 DSAISALDGQ 263
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RE+G+SRGFGFVT ST+EEA AI+
Sbjct: 105 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 164
Query: 111 ALDGQVTFN 119
TFN
Sbjct: 165 ------TFN 167
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SVAMRAMNGE 70
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 38 NPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
P + + + KLF+G +S+++ SL +AF +YG V AR++ D ETG+SRG+GFV
Sbjct: 185 KPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFV 244
Query: 98 TFSTVEEASSAIQALDG 114
+ST EE +A+Q+L+G
Sbjct: 245 CYSTKEELETALQSLNG 261
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
+A + ++KL+ G + YN+D L +YG ++ RETGRSRGF FVT S++
Sbjct: 99 EADQVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSI 158
Query: 103 EEASSAIQALDG 114
E+ + I+ LDG
Sbjct: 159 EDCETVIENLDG 170
>gi|332529248|ref|ZP_08405212.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332041471|gb|EGI77833.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 110
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 50/66 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSKL+VG +SY++ D+ L++ F +G V A++++DR++GRS+GFGFV + ++A +AI
Sbjct: 2 SSKLYVGNLSYSVRDDDLQQQFGAFGDVQSAKVMMDRDSGRSKGFGFVEMGSADQAEAAI 61
Query: 110 QALDGQ 115
+ L GQ
Sbjct: 62 RGLHGQ 67
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AFA+YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +DD L + F+++G V +AR++ DR+T RSRGFGFVT S+ E + A
Sbjct: 225 PSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDA 284
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 285 IAALDGQ 291
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L + F + G V A +I +RET +SRGFGF+T STVEEA A++
Sbjct: 133 AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVE 192
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ N L+EAF+K+G V EAR+I DR +G SRGFGFV ++TV+EA AI+ +
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 113 DGQ 115
DG+
Sbjct: 98 DGK 100
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 19 GNILRQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVN 78
G LR +G + S +P Q R +++++VG +S+ +D+++L F++ G V
Sbjct: 149 GRSLRVNSGPPPPRDRSSRSP---QRPRG-DANRVYVGNLSWGVDNSALANLFSEQGEVL 204
Query: 79 EARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
EARII DRE+GRSRGFGFVT+ + EE +AI LDG
Sbjct: 205 EARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDG 240
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+VEE A+
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 112 LDGQV 116
+G V
Sbjct: 142 FNGYV 146
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFVGG+++N D+ +L + F +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SDAMRAMNGE 70
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+SL EAF+ YG + E++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+++D+ SL++AF+ +G V E RI D+ +GRSRGFGFV F+ +A SA A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 112 LDGQ 115
+DG+
Sbjct: 102 MDGK 105
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 31 SCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGR 90
S +PS + R +++++VG +S+ +D+++L F++ G V EARI+ DRE+GR
Sbjct: 158 SGPPPPRDPSSQRGPRG-DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGR 216
Query: 91 SRGFGFVTFSTVEEASSAIQALDG 114
SRGFGFVT+ + EE +AI LDG
Sbjct: 217 SRGFGFVTYGSAEEVENAISNLDG 240
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+V+E +A++
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQ 143
Query: 112 LDGQV 116
+G V
Sbjct: 144 FNGYV 148
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AF++YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ + LREAF+K+G V +AR+I DR +G SRGFGFV ++TVEEA+ I+ +
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 113 DGQ 115
DG+
Sbjct: 102 DGK 104
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD +L AF++YG V +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR F KYG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 111 ALDGQ 115
A+ Q
Sbjct: 62 AMSNQ 66
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR+ F ++G V EA ++ DR+T RSRGFGFV FS+ +A A+
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ +G + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ D+ L++AF ++G V A++++DR+TGRS+GFGFV + EA +AI+
Sbjct: 3 NKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIE 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSR FGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 19 GNILRQTAGKRISC-ESSISNPSIYQAIR----CMSSSKLFVGGISYNMDDNSLREAFAK 73
G LR +G E+S + S YQ R SS++++VG +++++D L F++
Sbjct: 167 GRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSE 226
Query: 74 YGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
G V +A+++ DR++GRSRGFGFVT+S+ +E + AI++LDG
Sbjct: 227 QGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDG 267
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 8 RVIIMAFFSKVGNILRQTAGKRISCESSISNPSI-YQAIRCMSSSKLFVGGISYNMDDNS 66
R + ++ F ++ + AG E +S+ Y+ K+FVG + +++D +
Sbjct: 58 RKVTLSDFDQIEEV---EAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAA 114
Query: 67 LREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
L E F + G V +I D+ TGRSRGFGFVT S+ E +A Q +G
Sbjct: 115 LAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNG 162
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ +G + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ +G + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG IS++ D+ L + FA+ G V A+I++D+ TGRSRGFGFV +T E A +AI+
Sbjct: 3 NKLFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIK 62
Query: 111 ALDGQ 115
ALDG+
Sbjct: 63 ALDGK 67
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ +L AF++YG + E++II DRETGRSRGFGFVTF + + AI+
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ +L AF++YG + E++II DRETGRSRGFGFVTF + + AI+
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|418528345|ref|ZP_13094295.1| RNA-binding protein RNP-2 [Comamonas testosteroni ATCC 11996]
gi|371454721|gb|EHN67723.1| RNA-binding protein RNP-2 [Comamonas testosteroni ATCC 11996]
Length = 130
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L+++F+++G VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDQDLQDSFSEFGTVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
L GQ
Sbjct: 63 GLHGQ 67
>gi|299531904|ref|ZP_07045304.1| RNA-binding protein RNP-2 [Comamonas testosteroni S44]
gi|298720079|gb|EFI61036.1| RNA-binding protein RNP-2 [Comamonas testosteroni S44]
Length = 128
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L+++F+++G VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDQDLQDSFSEFGTVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
L GQ
Sbjct: 63 GLHGQ 67
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LF+GG+SY+ ++ +L++AF++YG V R+I TG+S+GFGFV FS+ +A++A+Q L
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 113 DGQV 116
+GQV
Sbjct: 121 NGQV 124
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ D+ L F+KYG + E ++ DRET RSRGFGFVTF E+A A+
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66
Query: 112 LDGQV 116
++G+
Sbjct: 67 MNGKT 71
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG++++ ++ SL + F+KYG ++E ++ DRET RSRGFGFVTF ++A A+ A
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKA 70
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ ++ SL + F+KYG ++E ++ DRET RSR FGFVTF +++A A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|264680851|ref|YP_003280761.1| RNA-binding protein RNP-2 [Comamonas testosteroni CNB-2]
gi|262211367|gb|ACY35465.1| RNA-binding protein RNP-2 [Comamonas testosteroni CNB-2]
Length = 128
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L+++F+++G VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDQDLQDSFSEFGTVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
L GQ
Sbjct: 63 GLHGQ 67
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D++LR F KYG + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 111 ALDGQ 115
A+ Q
Sbjct: 62 AMSNQ 66
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L++ +SYN+ D LR+ FA YG + A++I+DRETGRSRGFGFV S E A AI+ L
Sbjct: 3 LYISNLSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 113 DGQVTFNASCV 123
+ Q +++ +
Sbjct: 63 N-QASYDGKVI 72
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSISNPSIYQA----IRCMSSSKLFVGGISYNMDDNSL 67
+AF + + A +R S S+ +P ++ + ++ KLFV GI + + L
Sbjct: 18 LAFSPSPSFLWKAPALQRASL--SLRSPRLFSTTSMQMDKINDKKLFVSGIPFALSSEDL 75
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
RE F K+G V ++ ++ DRETGRSRGF F+TFS+ E AS A AL+
Sbjct: 76 RETFEKFGPVEDSYVVKDRETGRSRGFAFITFSSKEAASQACSALN 121
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL+EAF+ YG + +++II DRETGRSRGFGFVTF+ + AIQ
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 112 LDGQ 115
++ Q
Sbjct: 68 MNSQ 71
>gi|221069837|ref|ZP_03545942.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714860|gb|EED70228.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 132
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y D L+++F+++G VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYTFRDQDLQDSFSEFGTVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
L GQ
Sbjct: 63 GLHGQ 67
>gi|197308360|gb|ACH60531.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
Length = 66
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ FVGG++++ DD SL+EAF+ YG V E++II DRETGRSRGFGFVTF+ + AI
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAI 66
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL+EAF++YG + +++II DRETGRSRGFGFVTF+ + AI
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDG 67
Query: 112 LDGQ 115
++GQ
Sbjct: 68 MNGQ 71
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KL+VG +SYN + +L + FA++G V A+I+ DR+TGRS+GFGFV A +AI
Sbjct: 2 STKLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAI 61
Query: 110 QALDGQ 115
AL+GQ
Sbjct: 62 SALNGQ 67
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 54/66 (81%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS++++VG +S+ +DD +L+E F++ G V +A+++ DR++GRSRGFGFVT+S+ +E + A
Sbjct: 206 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 265
Query: 109 IQALDG 114
I +L+G
Sbjct: 266 IDSLNG 271
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+ + R KLFVG + +++D +L F + G V +I D+ +GRSRGFGFVT S
Sbjct: 78 VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMS 137
Query: 101 TVEEASSAIQALDG 114
T EE +A Q +G
Sbjct: 138 TKEEVEAAEQQFNG 151
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ ++A AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAIS 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|365875472|ref|ZP_09415000.1| RNA-binding protein [Elizabethkingia anophelis Ag1]
gi|442588736|ref|ZP_21007546.1| RNA-binding protein [Elizabethkingia anophelis R26]
gi|365756731|gb|EHM98642.1| RNA-binding protein [Elizabethkingia anophelis Ag1]
gi|442561494|gb|ELR78719.1| RNA-binding protein [Elizabethkingia anophelis R26]
Length = 93
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ I+Y++ ++ L E FA YG + A+II+DRETGRSRGFGFV +EA++AI++L
Sbjct: 3 IFISNINYSVKESQLEELFASYGAIQSAKIIMDRETGRSRGFGFVEMPNNDEANTAIESL 62
Query: 113 DGQV 116
+G +
Sbjct: 63 NGAL 66
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST
Sbjct: 99 YAAVEPPEEAKVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMST 158
Query: 102 VEEASSAIQ 110
VEEA AI+
Sbjct: 159 VEEADKAIE 167
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V +A+++ DRETGRSRGFGFV+ + EE + AI A
Sbjct: 203 RAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISA 262
Query: 112 LDGQ 115
LDGQ
Sbjct: 263 LDGQ 266
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS ++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S+ +DD L EAF ++G EA++++DR +GRSRGFGFVTFS A+ AI+
Sbjct: 89 KLFVGGLSWEVDDQQLMEAFQEFGNC-EAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEE 147
Query: 112 LDGQ 115
++G+
Sbjct: 148 MNGR 151
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+++ ++ L +AF KYG ++E ++ DRET RSRGFGFVTF V++A A+ A
Sbjct: 6 KLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|145233965|ref|XP_001400355.1| glycine-rich RNA-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134057294|emb|CAK37908.1| unnamed protein product [Aspergillus niger]
gi|350635078|gb|EHA23440.1| hypothetical protein ASPNIDRAFT_197860 [Aspergillus niger ATCC
1015]
Length = 116
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ D +LRE F++YG + EA ++ D +T RSRGFGFV F++ EA +A+
Sbjct: 2 AKLFIGGLAWHTTDETLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDVEADAAMN 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ DN L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQALGGRSIV 75
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ L +AF++YG V E++II DRETGRSRGFGFVTF++ + AI+
Sbjct: 9 RCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL EAF++YG V E+++I DRETGRSRGFGFVTF + AI
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVG 68
Query: 112 LDGQV 116
++GQ
Sbjct: 69 MNGQT 73
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST
Sbjct: 99 YAAVEPPEEAKVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMST 158
Query: 102 VEEASSAIQ 110
VEEA AI+
Sbjct: 159 VEEADKAIE 167
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V +A+++ DRETGRSRGFGFV+ + EE + AI A
Sbjct: 203 RAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISA 262
Query: 112 LDGQ 115
LDGQ
Sbjct: 263 LDGQ 266
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG + +++D L E F ++G V ARI++DRETGRSRGFGFVT S+ + + AI AL
Sbjct: 223 VYVGNLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAAL 282
Query: 113 DGQ 115
DGQ
Sbjct: 283 DGQ 285
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ- 110
K+FVG + ++++ +L F + G V A +I ++ T +SRGFGFV ST E+ A+
Sbjct: 121 KIFVGNLPWDVESENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKALNK 180
Query: 111 ----ALDGQV 116
LDG+V
Sbjct: 181 FSGYELDGRV 190
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D SL+EAF+ YG + +++II DRETGRSRGFGFVTF+ + AIQ
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 112 LDGQ 115
++ Q
Sbjct: 68 MNSQ 71
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S++ DD SL++AF +G V +++++ DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGR 72
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST
Sbjct: 105 YAAVEPPEEAKVYVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRETGQSRGFGFVTMST 164
Query: 102 VEEASSAIQ 110
+EEA AI+
Sbjct: 165 IEEADKAIE 173
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V A ++ DRE+GRSRGFGFVT + EE AI A
Sbjct: 209 RAYVGNLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISA 268
Query: 112 LDGQ 115
LDGQ
Sbjct: 269 LDGQ 272
>gi|385808623|ref|YP_005845019.1| RRM domain-containing protein [Ignavibacterium album JCM 16511]
gi|383800671|gb|AFH47751.1| RRM domain protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KLFVG + ++++D L+ F YG V A+++ D++T RS+GFGFV F T EAS+AI
Sbjct: 2 STKLFVGSLPWSVNDAELKTLFEPYGKVASAKVVTDKQTRRSKGFGFVEFETEAEASAAI 61
Query: 110 QALDG 114
AL+G
Sbjct: 62 NALNG 66
>gi|407893429|ref|ZP_11152459.1| RNP-1 like RNA-binding protein [Diplorickettsia massiliensis 20B]
Length = 132
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VGG+SY++DD+ LRE F YG V ++I D +GRS+GFGFV T EEA AI+ L
Sbjct: 1 MYVGGLSYSVDDDGLRELFTPYGEVKFVKVIRDFHSGRSKGFGFVEMETPEEAKEAIERL 60
Query: 113 DGQV 116
G +
Sbjct: 61 HGSI 64
>gi|345879103|ref|ZP_08830782.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223892|gb|EGV50316.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 93
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++VG +S+N D+ L E FA YG V+ A++I+DRETGRSRGFGFV S A SAI +
Sbjct: 4 NIYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDS 63
Query: 112 LD 113
L+
Sbjct: 64 LN 65
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
R M + KL+V G+++ +DD SLR AF ++G V + +++ + +TGRS+GFGFVTF +EA
Sbjct: 15 RYMRACKLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEA 74
Query: 106 SSAIQALDGQ 115
A++++DG+
Sbjct: 75 KEALESMDGK 84
>gi|345864924|ref|ZP_08817119.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345124004|gb|EGW53889.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 91
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++VG +S+N D+ L E FA YG V+ A++I+DRETGRSRGFGFV S A SAI +
Sbjct: 2 NIYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDS 61
Query: 112 LD 113
L+
Sbjct: 62 LN 63
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ + LREAF+K+G V EAR+I DR +G SRGFGFV ++TVEEA I+ +
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 113 DGQ 115
DG+
Sbjct: 97 DGK 99
>gi|403414037|emb|CCM00737.1| predicted protein [Fibroporia radiculosa]
Length = 146
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 22/88 (25%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEAR----------------------IILDRE 87
S+K++VG +S+N +D+SL +AF+++G V + R ++ DRE
Sbjct: 2 SAKVYVGNLSWNTNDDSLHQAFSQFGTVTDVRDPVKGSPPSLHNDGSRFVVHSIVMKDRE 61
Query: 88 TGRSRGFGFVTFSTVEEASSAIQALDGQ 115
TGRSRGFGFVTF++V+EA++AI L Q
Sbjct: 62 TGRSRGFGFVTFNSVDEANAAINGLHEQ 89
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLFV G+S++ D++LRE F ++G + EA ++ DR T RSRGFGFV F+T EA SA+
Sbjct: 2 SKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALG 61
Query: 111 ALDGQ 115
A++ Q
Sbjct: 62 AMNNQ 66
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSK++VG + Y++ D +L FA++G V+ A++++DRETGRS+GFGFV + E A +AI
Sbjct: 2 SSKIYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAI 61
Query: 110 QALDG 114
+AL G
Sbjct: 62 RALHG 66
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ DN L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQALGGRSIV 75
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L+V + + ++D+ L + F++YG V+ A++I+DRETGRSRGFGFV S+ EEA AI+ L
Sbjct: 3 LYVSNLGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIKEL 62
Query: 113 DGQ 115
+G+
Sbjct: 63 EGK 65
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + DD+ L + F++YG V A ++ DRETGRSRGFGFVT + EE AI A
Sbjct: 206 RAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISA 265
Query: 112 LDGQ 115
LDGQ
Sbjct: 266 LDGQ 269
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y+++ L + F + G V A +I ++ETG+SRGFGFVT ST
Sbjct: 102 YAAVEPPEEAKVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMST 161
Query: 102 VEEASSAIQ 110
+EEA AI+
Sbjct: 162 IEEADKAIE 170
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+++++VG +S+ +D+++L F++ G V EARII DRE+GRSRGFGFVT+ + EE +AI
Sbjct: 176 ANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAI 235
Query: 110 QALDG 114
LDG
Sbjct: 236 SNLDG 240
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+VEE A+
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 112 LDGQV 116
+G V
Sbjct: 142 FNGYV 146
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+S++ L F++YG + + ++I DRETGRSRGFGFVTF+ +A++A +
Sbjct: 9 KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKC 68
Query: 112 LDG 114
+DG
Sbjct: 69 MDG 71
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+++++VG +S+ +D+++L F++ G V EARII DRE+GRSRGFGFVT+ + EE +AI
Sbjct: 178 ANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAI 237
Query: 110 QALDG 114
LDG
Sbjct: 238 SNLDG 242
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+VEE A+
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 143
Query: 112 LDGQV 116
+G V
Sbjct: 144 FNGYV 148
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL++G +S++ +N +++ FA++G V E +I+D+ TGR+RGFGFVT ST E A +A+Q
Sbjct: 2 NKLYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQ 61
Query: 111 ALDGQ 115
L+G+
Sbjct: 62 NLNGK 66
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 48/62 (77%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ ++A AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNPDDAQKAIS 61
Query: 111 AL 112
A+
Sbjct: 62 AM 63
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L EAF++YG V E++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG +S+ + D L+E F YG V A++I+DR+TGRS+GFGFV + +EA +AI
Sbjct: 4 KLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAISG 63
Query: 112 LDGQV 116
+ GQV
Sbjct: 64 MHGQV 68
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ +D SL +AF+++G + +++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ D L + FA+YG V +++ DRETGR RGFGFV T E SAI+AL
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
KLF+GG++++ +++ L + F KYG ++E ++ DRET RSRGFGFVTF ++A A
Sbjct: 2 DDGKLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 61
Query: 109 IQALDGQ 115
+ A++G+
Sbjct: 62 MMAMNGK 68
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
R SSK++VG + Y++ D+SL+ F+++G V A++++DR+TGRS+GF FV ST A
Sbjct: 24 RLTMSSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFA 83
Query: 106 SSAIQALDGQ 115
+AI L+GQ
Sbjct: 84 QAAIDGLNGQ 93
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ + LREAF+K+G V EAR+I DR +G SRGFGFV ++TVEEA I+ +
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 113 DGQ 115
DG+
Sbjct: 97 DGK 99
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+++ D+ SL AF KYG+++E ++ DRET +SRGF F+TF + +A +A++
Sbjct: 9 KLFIGGLNHETDEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +++ KLF+ G+S D L+ AFA +G + EA++I DR +GRS+GFGFV ++T+EE
Sbjct: 61 VPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEE 120
Query: 105 ASSAIQA-----LDGQVTF 118
A +A Q LDG V F
Sbjct: 121 AENARQEMNAKFLDGWVIF 139
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 31 SCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGR 90
SC +P + +R KLF+GG+S+ D+SLRE F K+G + + ++ D +T R
Sbjct: 84 SCVEEGHDPKEPEQLR-----KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKR 138
Query: 91 SRGFGFVTFSTVEEASSAIQA----LDGQV 116
SRGFGFVT+S VEE +A+ A +DG+V
Sbjct: 139 SRGFGFVTYSCVEEVDAAMCARPHKVDGRV 168
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGF FVT+S VEE
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYSCVEEG 89
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 187 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 238
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ + +LR F ++G V+EA ++ DR+TGRSRGFGFV +S E+A AI
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS + +VG + + +D+ L + F+++G V A I+ DRETGRSRGFGFVT ++ E+ SA
Sbjct: 197 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 256
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 257 ISALDGQ 263
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I ++E+G+SRGFGFVT ST+EEA AI+
Sbjct: 105 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIE 164
Query: 111 ALDGQVTFN 119
TFN
Sbjct: 165 ------TFN 167
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ L + FA+YG V ++ DRETGRSRGFGFV + +E SSAIQAL
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S KLFVGG+++ D+SL AF++YG V + ++ DRETGRSRGFGFVT S A AI
Sbjct: 20 SQKLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAI 79
Query: 110 QALD 113
+AL+
Sbjct: 80 EALN 83
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG++++ D+ +L + F+ +G ++E ++ DRET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S LF+ G+S + L+EAFAK+G V AR++ DR TG S+GFGFV ++TVE+A+
Sbjct: 34 PSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKG 93
Query: 109 IQALDGQ 115
I+ +DG+
Sbjct: 94 IEGMDGK 100
>gi|42521960|ref|NP_967340.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|39574490|emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 120
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG + Y++DD +L + FA++G V+ A++I+DRETGRS+GFGFV S A AI
Sbjct: 2 AKKLYVGNLPYSVDDEALHQHFAQFGAVDSAKVIMDRETGRSKGFGFVEMSDDSAADQAI 61
Query: 110 QALDG 114
+ +G
Sbjct: 62 ERGNG 66
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS + +VG + + +D+ L + F+++G V A I+ DRETGRSRGFGFVT ++ E+ SA
Sbjct: 197 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 256
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 257 ISALDGQ 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RE+G+SRGFGFVT ST+EEA AI+
Sbjct: 105 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 164
Query: 111 ALDGQVTFN 119
TFN
Sbjct: 165 ------TFN 167
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++ V +++ +D+ +L+ F + G V EAR+I DRE+GRSRGFGFVTFS+ +E +SA
Sbjct: 190 SENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSA 249
Query: 109 IQALDG 114
IQ+L+G
Sbjct: 250 IQSLNG 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L E F G V +I D+ TGRSRGFGFVT S+VEEA +A Q
Sbjct: 87 KLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQ 146
Query: 112 LDG 114
+G
Sbjct: 147 FNG 149
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 51/66 (77%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KLFVGG+S++ ++ LR+AF+ YG + E R+I++R +G S+GFGFV F++ +A +A+
Sbjct: 34 NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNAL 93
Query: 110 QALDGQ 115
+ +DGQ
Sbjct: 94 KEMDGQ 99
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + DD+ L + F++YG V A ++ DRETGRSRGFGFVT + EE AI A
Sbjct: 206 RAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISA 265
Query: 112 LDGQ 115
LDGQ
Sbjct: 266 LDGQ 269
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y A+ +K++VG + Y+++ L + F + G V A +I ++ETG+SRGFGFVT ST
Sbjct: 102 YAAVEPPEEAKVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMST 161
Query: 102 VEEASSAIQ 110
+EEA AI+
Sbjct: 162 IEEADKAIE 170
>gi|256839767|ref|ZP_05545276.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738697|gb|EEU52022.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 123
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L++ +SYN+ D LR+ FA YG + A++I+DRETGRSRGFGFV S E A AI+ L
Sbjct: 3 LYISNLSYNISDADLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 113 DGQVTFNASCV 123
+ Q +++ +
Sbjct: 63 N-QASYDGKVI 72
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+KLFVG +S+ D+ +L F+ YG V EARI +R++GRSRGFGFVT S+ E ++AI
Sbjct: 23 PNKLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAI 82
Query: 110 QALDG 114
++LDG
Sbjct: 83 ESLDG 87
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +++ KLF+ G+S D L+ AFA +G + EA++I DR +GRS+GFGFV ++T+EE
Sbjct: 61 VPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEE 120
Query: 105 ASSAIQA-----LDGQVTF 118
A +A Q LDG V F
Sbjct: 121 AENARQEMNAKFLDGWVIF 139
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 54/66 (81%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS++++VG +S+ +DD +L+E F++ G V +A+++ DR++GRSRGFGFVT+S+ +E + A
Sbjct: 205 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264
Query: 109 IQALDG 114
I +L+G
Sbjct: 265 IDSLNG 270
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+ + R KLFVG + +++D +L F + G V +I D+ TGRSRGFGFVT S
Sbjct: 77 VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMS 136
Query: 101 TVEEASSAIQALDG 114
T EE +A Q +G
Sbjct: 137 TKEEVEAAEQQFNG 150
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSI-----SNPSIYQAIRCMSSSKLFVGGISYNMDDNS 66
MA S + +L T+ R+ S+P A+R ++ KLF+ G+S D
Sbjct: 1 MALLSGIRRVLGGTSTGRLLLAKDPFCAVRSSPIGLGAVRDFTT-KLFISGLSRQTTDEG 59
Query: 67 LREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
LR F+++G + EAR++ DR +GRSRGFGFV ++T+E+A+ + +DG+
Sbjct: 60 LRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGKEGMDGK 108
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ + +RE FA+YG VN + DRETGR RGF FV T EE ++AI+AL
Sbjct: 3 IYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|149022306|gb|EDL79200.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022307|gb|EDL79201.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022308|gb|EDL79202.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022309|gb|EDL79203.1| rCG27231, isoform CRA_b [Rattus norvegicus]
Length = 144
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+++L AF+ +G + E++II DRETGRSRGFGFVTFS + AI+
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG + Y++ D++LR FA++G V A++++DRETGRS+GF FV ++ +E +AI
Sbjct: 2 STKIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 110 QALDG 114
AL G
Sbjct: 62 SALHG 66
>gi|148695242|gb|EDL27189.1| mCG1305, isoform CRA_c [Mus musculus]
Length = 144
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 49/67 (73%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+++FVGG+ +++ + L++ F+KYG V +AR+++DRETGRSRGFGF++++
Sbjct: 3 EDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDEC 62
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 63 IAALDGQ 69
>gi|34785785|gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 56 GGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
GG+SY+ + SL EAF+KYG + + +I DRET RSRGFGFVTF E+A A+ A++G+
Sbjct: 3 GGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGK 62
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + +++DD L + F+++G V AR++ DRETGRSRGF FVT ++ E + A
Sbjct: 203 PSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEA 262
Query: 109 IQALDGQV 116
I ALDGQ
Sbjct: 263 IGALDGQT 270
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + +++D L + F G V A +I +RET RSRGFGFVT STVEEA A++
Sbjct: 111 AKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 170
>gi|223936242|ref|ZP_03628155.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223895104|gb|EEF61552.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 103
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KL+VG +S+ +N +++ F+ +G VNE +I+D+ TGR+RGFGFVT +T E A +AI
Sbjct: 2 STKLYVGNLSFKATENDIQDLFSAHGPVNEVNLIMDKMTGRARGFGFVTMATAEGAEAAI 61
Query: 110 QALDGQ 115
L+G+
Sbjct: 62 ADLNGK 67
>gi|391870551|gb|EIT79731.1| glycine-rich RNA-binding protein, putative [Aspergillus oryzae
3.042]
Length = 153
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 34 SSISNPSI--YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRS 91
S+ NP + YQ R SKLF+GG++++ D SLR F KYG V EA ++ DR+TGRS
Sbjct: 12 STWINPLVLLYQDFRM---SKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRS 68
Query: 92 RGFGFVTFSTVEEASSAIQALDGQ 115
RGFGFV FS+ +A +A ++ Q
Sbjct: 69 RGFGFVRFSSEADAEAAAHEMNNQ 92
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 730 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 789
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 790 RPHKVDGRV 798
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 817 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 868
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++KL+VG +S+ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + +E ++A
Sbjct: 12 SANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNA 71
Query: 109 IQALDG 114
I LDG
Sbjct: 72 ISNLDG 77
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 174
>gi|145348372|ref|XP_001418624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578854|gb|ABO96917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%)
Query: 24 QTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARII 83
QTAG+R + Q R + +++ G +S+ MD L++ ++G V ++R+I
Sbjct: 45 QTAGERRDRPMRMDGERRPQRNRDADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDSRLI 104
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
DRETGRSRGFGFVT S+ EA + L+GQ
Sbjct: 105 TDRETGRSRGFGFVTMSSEAEADEVVAQLNGQ 136
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
+DR TGRSRGF FVT ++ E+ A+ A +G
Sbjct: 1 MDRNTGRSRGFAFVTLASAEDMERAMAATNG 31
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG +S+ D+ +L F+ YG V EARI D+++GRSRGFGFVT S E ++AI+
Sbjct: 1 NKLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIE 60
Query: 111 ALDG 114
LDG
Sbjct: 61 NLDG 64
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++KL+VG +S+ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + +E ++A
Sbjct: 190 SANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNA 249
Query: 109 IQALDG 114
I LDG
Sbjct: 250 ISNLDG 255
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + + +D L F + G V ++ DR TGRSRGFGFVT +VEE ++A++
Sbjct: 88 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 147
Query: 112 LDG 114
+G
Sbjct: 148 FNG 150
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V +A+++ DRETGRSRGFGFV+ + EE + AI A
Sbjct: 48 RAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISA 107
Query: 112 LDGQ 115
LDGQ
Sbjct: 108 LDGQ 111
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 45 IRC--MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
+RC +S+KLF+GG+S++ + LR+ F+KYG + EA ++ DR+TGR RGFGFVTF+
Sbjct: 1 MRCCRPTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEP 60
Query: 103 EEASSAIQ 110
A + ++
Sbjct: 61 AAADAVVE 68
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G++I + S+ Q ++ + K+FVGG+S + ++ RE F+++G V EA+I+ D
Sbjct: 75 GRQIDAKKSVP-----QEMKP-KARKVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDH 128
Query: 87 ETGRSRGFGFVTFSTVEEASS 107
+GRSRGFGFVTF+ E+AS+
Sbjct: 129 MSGRSRGFGFVTFA--EDASA 147
>gi|326319544|ref|YP_004237216.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376380|gb|ADX48649.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 124
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++ F++YG VN A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDEDLQQTFSQYGNVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
GQ
Sbjct: 63 GAHGQ 67
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++ G +S+ MD L++ A++G V+E+R+I DRETGRSRGFGFVT S+ +EA +
Sbjct: 172 KVYFGNLSWGMDHLDLQDLCAEFGNVDESRLITDRETGRSRGFGFVTMSSEKEAEDVVAQ 231
Query: 112 LDGQ 115
L+GQ
Sbjct: 232 LNGQ 235
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL++G +S++MDD +L + F++Y ++ I+ DR TGRSRGFGF T + E A SAI A
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQY-QASDCVIVTDRNTGRSRGFGFATVPSQEMADSAIAA 133
Query: 112 LDGQVTF 118
L+ F
Sbjct: 134 LNDSDQF 140
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ GF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKTGFAFVTF 174
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LFVGG+S++ + +SLRE FAK G V +A I+ DR+TG SRGFGFVT + ++A+ A++
Sbjct: 77 RLFVGGLSWDTESDSLRELFAKVGAVVDAMIVTDRDTGDSRGFGFVTMANRKDATKAMKE 136
Query: 112 LDG 114
L G
Sbjct: 137 LGG 139
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +++ KLFV G+S D L+ AFA +G + EA+++ DR +GRS+GFGFV ++T+EE
Sbjct: 57 VPPLTTPKLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEE 116
Query: 105 ASSAIQA-----LDGQVTF 118
A A Q LDG V F
Sbjct: 117 AEKARQEMNAKFLDGWVIF 135
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 52/65 (80%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+SY+ ++ +L++AF+++G++ + ++I TG+S+G+GFV F++ +EA++A+
Sbjct: 125 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 184
Query: 112 LDGQV 116
+ G+V
Sbjct: 185 MGGEV 189
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 5/72 (6%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLFVGG+S++ + +L +AF+ YG V EA++I DR + +S+G+GFVTF++ +EA AI
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITE 92
Query: 110 ---QALDGQVTF 118
+AL+G+V F
Sbjct: 93 MNEKALNGRVVF 104
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 80 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 139
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 140 RPHKVDGRV 148
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 167 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 218
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ SL AF+ YG + E++II DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 112 LDGQ 115
+ G+
Sbjct: 69 MSGK 72
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 38 NPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
NP + + + KLFVG +S++ SL +AF +YG V AR++ D ETG+SRG+GFV
Sbjct: 185 NPKPKEPLYPETEYKLFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFV 244
Query: 98 TFSTVEEASSAIQALDG 114
+ST E +A+ +LDG
Sbjct: 245 CYSTKAEMQTALVSLDG 261
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++KL+ G + YN+D L +YG ++ RETGRSRGF FVT S++E+ ++ I
Sbjct: 106 NTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVI 165
Query: 110 QALD 113
+ LD
Sbjct: 166 ENLD 169
>gi|344257880|gb|EGW13984.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 122
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+P + +R KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGF
Sbjct: 4 HDPKEPEQLR-----KLFIGGLSFETADDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 58
Query: 97 VTFSTVEEASSAIQA----LDGQV 116
VT+S VEE +A+ A +DG+V
Sbjct: 59 VTYSCVEEVDAAMCARPHKVDGRV 82
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 48/62 (77%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFVGG+S+N+DD+ L++ F K+G V AR+I +R T RS+GFG+V F++ E+A A++A+
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 113 DG 114
G
Sbjct: 463 AG 464
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++ LF+G + ++ +S+ EAF++YG +N R+ D ET R +GFG+V F+T E A++A+
Sbjct: 500 TTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAV 559
Query: 110 QALDG 114
G
Sbjct: 560 NVGRG 564
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 46 RC--MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVE 103
RC ++S +LFV G+S + L++AFA +G + +AR+I DR++GRS+GFGFVT++T+E
Sbjct: 27 RCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIE 86
Query: 104 EASSA-----IQALDGQVTF 118
+A A + LDG V F
Sbjct: 87 DAEKAKAEMNAKFLDGWVIF 106
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S LF+ G+S + L+EAFAK+G V AR++ DR TG S+GFGF+ ++TVE+A+
Sbjct: 34 PSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKG 93
Query: 109 IQALDGQ 115
I+ +DG+
Sbjct: 94 IEGMDGK 100
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + +++D+ L + F+++G V AR++ DRETGRSRGFGFV+ ++ E + A
Sbjct: 220 PSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDA 279
Query: 109 IQALDGQV 116
I ALDGQ
Sbjct: 280 IAALDGQT 287
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L + F G V A +I +RET RSRGFGFVT STVEEA A++
Sbjct: 128 AKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 187
Query: 111 ALDG 114
L+G
Sbjct: 188 MLNG 191
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +S+N+DD++L F + G V AR+I DRE+GRSRGFGFVT+ T +E A+
Sbjct: 183 NRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVS 242
Query: 111 ALDG 114
LDG
Sbjct: 243 NLDG 246
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT STVEE A++
Sbjct: 75 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 134
Query: 112 LDGQV 116
L+G V
Sbjct: 135 LNGYV 139
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++AF+++G V+ A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 9 NKLYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAIS 68
Query: 111 ALDGQ 115
A++GQ
Sbjct: 69 AMNGQ 73
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 51/65 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D+ + +AF+++G V+ A+++++R+TGRS+GFGFV S+ EA +AI+
Sbjct: 3 NKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIE 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+ LFV G++ L+EAF+K+G V EAR+I DR +G SRGFGFV ++TV+EA AI+
Sbjct: 34 NNLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIK 93
Query: 111 ALDGQ 115
+DG+
Sbjct: 94 GMDGK 98
>gi|154313713|ref|XP_001556182.1| hypothetical protein BC1G_05706 [Botryotinia fuckeliana B05.10]
Length = 197
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF-------STVE 103
SKLF+GG++++ D+N+LRE F+++G V EA ++ DR+TGRSRGFGFV + S
Sbjct: 2 SKLFIGGLAWHTDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEA 61
Query: 104 EASSAIQALDGQVTFNASCV 123
+A AIQ ++ V F+ +
Sbjct: 62 DAEKAIQEMN-SVEFDGRTI 80
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+K++VG + Y++ D+SLR FA++G V A++++DRETGRS+GF FV ++ +E +AI
Sbjct: 2 STKIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 110 QALDG 114
L G
Sbjct: 62 SGLHG 66
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D +LR+ F+K+G + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 EMNNQ 66
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++LF+GG+S +D+ LREAF +YG + EA + +DR +GRSRGFGFV+F E+A AI
Sbjct: 14 TRLFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDAID 73
Query: 111 ALDGQ 115
+ G+
Sbjct: 74 QMTGK 78
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++VG +S+N+D + L + FA++G V+ +I DRETGRS+GF FV ST EA +AI+
Sbjct: 4 KIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIEK 63
Query: 112 LDG 114
L+G
Sbjct: 64 LNG 66
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +KL+VG +S+ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + +E ++A
Sbjct: 187 SGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNA 246
Query: 109 IQALDG 114
I LDG
Sbjct: 247 ISNLDG 252
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + + +D L F + G V ++ DR TGRSRGFGFVT ST EE S+A++
Sbjct: 85 KLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQ 144
Query: 112 LDG 114
+G
Sbjct: 145 FNG 147
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
Length = 90
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K++VG +SY+ D L++ FA++G V A ++ DR TGRSRGFGFV + EEA AI
Sbjct: 2 NQKIYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAI 61
Query: 110 QALDG 114
+AL+G
Sbjct: 62 EALNG 66
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D +LR+ F+K+G + EA ++ DR+T RSRGFGFV F++ EA +A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 EMNNQ 66
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
++ +LFV G+S D L+EAF+ +G + +A++I+DR +GRS+GFGF+T++T+EEA
Sbjct: 33 LTCPRLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEEAEK 92
Query: 108 AIQA-----LDGQVTF 118
A + LDG V F
Sbjct: 93 AREGMNAKFLDGWVIF 108
>gi|347832409|emb|CCD48106.1| hypothetical protein [Botryotinia fuckeliana]
Length = 200
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF-------STVE 103
SKLF+GG++++ D+N+LRE F+++G V EA ++ DR+TGRSRGFGFV + S
Sbjct: 2 SKLFIGGLAWHTDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEA 61
Query: 104 EASSAIQALDGQVTFNASCV 123
+A AIQ ++ V F+ +
Sbjct: 62 DAEKAIQEMN-SVEFDGRTI 80
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 63 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 122
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 123 RPHKVDGRV 131
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 150 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 201
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 12 MAFFSKVGNILRQTAGKRISCESSIS-------NPSIYQAIRCMSSSKLFVGGISYNMDD 64
+ FF + NIL A R C S +S +PS +R M+S K+FV G++++ +
Sbjct: 26 LLFF--ISNILHHMAAVREICGSLMSLSKLQHASPSQLPFLRTMTS-KIFVKGLAFSTTE 82
Query: 65 NSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+ L EAF++YG V +A I+L+R RS+GFG+VTF+ E+A A
Sbjct: 83 DKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKA 126
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
+AI+ KL+VG + Y+M + L E F + G V A +I DR T RSRGFGFVT +V
Sbjct: 105 EAIKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSV 164
Query: 103 EEASSAIQALDG 114
EEA AIQ +G
Sbjct: 165 EEAKKAIQMFNG 176
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S K++ G + + + LR+AFA V A++I +R++ RSRGFGFV+F + E A +A
Sbjct: 214 SEHKIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAA 273
Query: 109 IQALDGQ 115
++A++G+
Sbjct: 274 LEAMNGE 280
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ ++L+VG + + + +N LRE F +YG VNE +I+D+ TG+SRGF FVT + + A S
Sbjct: 44 MNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQS 103
Query: 108 AIQALDG 114
AI L+G
Sbjct: 104 AINNLNG 110
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L +AF+K+G + ++++I DRETGRSRGFGFVTF+ + AI+
Sbjct: 9 RCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEE 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSK++VG + Y++ D+ L F+++G V A++++DRETGRS+GFGFV ++ E A +AI
Sbjct: 2 SSKIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 110 QALDG 114
AL G
Sbjct: 62 SALHG 66
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++K++VG +++ +D+++L F++ G V +A++I DRE+GRSRGFGFVT+ T E ++A
Sbjct: 182 SANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNNA 241
Query: 109 IQALDG 114
I LDG
Sbjct: 242 ISNLDG 247
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +++D L F + G V ++ DR TGRSRGFGFVT S+ EEA +A++
Sbjct: 79 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138
Query: 112 LDG 114
+G
Sbjct: 139 FNG 141
>gi|125551311|gb|EAY97020.1| hypothetical protein OsI_18941 [Oryza sativa Indica Group]
Length = 104
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
S+++VG + Y D+ SL+++FA YG V+ + I +DRETGRSRGFGFV+F + AS AI+
Sbjct: 23 SRVYVGNLPYRADERSLKDSFANYGAVS-SEIAVDRETGRSRGFGFVSFQDSKSASDAIK 81
Query: 111 ALDGQ 115
++GQ
Sbjct: 82 GMNGQ 86
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 175
>gi|398398381|ref|XP_003852648.1| hypothetical protein MYCGRDRAFT_104484 [Zymoseptoria tritici
IPO323]
gi|339472529|gb|EGP87624.1| hypothetical protein MYCGRDRAFT_104484 [Zymoseptoria tritici
IPO323]
Length = 184
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ DD +LR F +YG V+EA ++ DR+TGRSRGFGFV F+ A +AI
Sbjct: 2 SKLFIGGLAWHTDDQTLRAKFEEYGQVDEAIVVKDRDTGRSRGFGFVRFADDAGADAAIT 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|283779286|ref|YP_003370041.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
gi|283437739|gb|ADB16181.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
Length = 100
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG +SY++++ SL E F+++G V A++I DRETGRS+GFGFV A SAIQA
Sbjct: 4 KLYVGNLSYDVNNQSLEELFSQFGAVRSAQVIQDRETGRSKGFGFVEMQDDNAARSAIQA 63
Query: 112 L 112
L
Sbjct: 64 L 64
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P +Y A + +++VG + +++D L F+++G V +AR++ DRETGRSRGFGFV
Sbjct: 200 PRVYDA-----AFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQ 254
Query: 99 FSTVEEASSAIQALDGQ 115
S E + AI ALDGQ
Sbjct: 255 MSNENEVNVAIAALDGQ 271
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D +L F + G V + +I +R+T +SRGFGFVT STVEEA A++
Sbjct: 113 AKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 172
Query: 111 ALD 113
+
Sbjct: 173 KFN 175
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+++ VG +++ +D+ +L F + G V EA++I DRE+GRSRGFGFVTFS+ +E SAI+
Sbjct: 196 NRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIR 255
Query: 111 ALDG 114
LDG
Sbjct: 256 TLDG 259
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LFVG + +++D L E F G V +I D+ TGRSRGFGFVT S+ E +A Q
Sbjct: 85 RLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQ 144
Query: 112 LDGQV 116
L+G V
Sbjct: 145 LNGYV 149
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG++++ D+ L + F+ +G ++E +I D+ET RSRGFGF+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 123 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 175
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S++ D +L +AF K+G++ EA++++DR+TGRSRGFGFVTF + AI +
Sbjct: 8 RCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDS 67
Query: 112 LDG 114
+ G
Sbjct: 68 MHG 70
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +S+ +DD +L F++ G V EAR+I DR++GRS+GFGFVT+ + +E +AI+
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 111 ALDG 114
+LDG
Sbjct: 264 SLDG 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L + F G V +I D+ TGRSRGFGFVT S+V E +A Q
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 112 LDG 114
+G
Sbjct: 152 FNG 154
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P QA+ + KLFVG +S+ + L EAF + G V AR++ D ETGRSRG+GFV
Sbjct: 195 PKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVC 254
Query: 99 FSTVEEASSAIQALDG 114
+ST EE A+ +L+G
Sbjct: 255 YSTREEMDEALSSLNG 270
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 24 QTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARII 83
Q G + S S PS+ + +++KL+ G + YN D L +Y ++
Sbjct: 92 QEEGAAVGASSDDSGPSVAAST---TTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVL 148
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
DR TGRSRGF FVT +TV++ I+ LDG +
Sbjct: 149 YDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSL 181
>gi|405963050|gb|EKC28659.1| RNA-binding protein 24-A [Crassostrea gigas]
Length = 223
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+K+FVGG+ Y+ D SLRE F K+G + EA +I DR+TG+SRG+GFVT + E A A
Sbjct: 13 TKIFVGGLPYHTTDKSLREFFDKFGEIEEAVVITDRQTGKSRGYGFVTMANREAAERA 70
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGY-VNEARIILDRETGRSRGFGFVTFSTVEEASS 107
S +++ VG +++ +DD +L F + G V EAR+I DRE+GRSRGFGFVTF + +E S
Sbjct: 193 SENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRSRGFGFVTFGSPDEVKS 252
Query: 108 AIQALDG 114
AIQ+LDG
Sbjct: 253 AIQSLDG 259
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +++D L E F G V +I D+ TGRSRGFGFVT S+VEEA +A +
Sbjct: 90 KLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAKQ 149
Query: 112 LDG 114
+G
Sbjct: 150 FNG 152
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 50/65 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y+++++ L + F+ +G V A++++DRETGRS+GFGFV F + AS AI
Sbjct: 3 TKLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAIN 62
Query: 111 ALDGQ 115
A++G+
Sbjct: 63 AMNGK 67
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFV G++ L+EAF+K+G V EAR+I DR +G SRGFGFV ++TV+EA AI+ +
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 113 DGQ 115
DG+
Sbjct: 96 DGK 98
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KLF+GG+S +++L EAFA+YG V EA I+ D+ T RS+GFGFV F++ EEA+ A
Sbjct: 35 THKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKAR 94
Query: 110 QALDGQV 116
++G+V
Sbjct: 95 DEMNGKV 101
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P QA+ + KLFVG +S+ + L EAF + G V AR++ D ETGRSRG+GFV
Sbjct: 195 PKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVC 254
Query: 99 FSTVEEASSAIQALDG 114
+ST EE A+ +L+G
Sbjct: 255 YSTREEMDEALSSLNG 270
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 24 QTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARII 83
Q G + S S PS+ + +++KL+ G + YN D L +Y ++
Sbjct: 92 QEEGAAVGASSDDSGPSVAAST---TTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVL 148
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
DR TGRSRGF FVT +TV++ I+ LDG +
Sbjct: 149 YDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSL 181
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+++ VG +++ +D+ +L F + G V EA++I DRE+GRSRGFGFVTFS+ +E SAI+
Sbjct: 196 NRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIR 255
Query: 111 ALDG 114
LDG
Sbjct: 256 TLDG 259
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LFVG + +++D L E F G V +I D+ TGRSRGFGFVT S+ E +A Q
Sbjct: 85 RLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQ 144
Query: 112 LDGQV 116
L+G V
Sbjct: 145 LNGYV 149
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 34 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 93
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 94 RPHKVDGRV 102
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LRE F KYG + ++ DR++G+ RGF FVTF
Sbjct: 121 LTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 172
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S ++D+ SL++AF+ +G V E RI D+ +GRSRGFGFV F+ +A SA A
Sbjct: 41 KLFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 100
Query: 112 LDGQ 115
+DG+
Sbjct: 101 MDGK 104
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +S+N+DD++L F + G V AR+I DRE+GRSRGFGFVT+ + EE A+
Sbjct: 187 NRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVS 246
Query: 111 ALDG 114
LDG
Sbjct: 247 NLDG 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT STVEE A++
Sbjct: 78 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVEQ 137
Query: 112 LDGQV 116
L+G V
Sbjct: 138 LNGYV 142
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +S+ +DD +L F++ G V EAR+I DR++GRS+GFGFVT+ + +E +AI+
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 111 ALDG 114
+LDG
Sbjct: 264 SLDG 267
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L + F G V +I D+ TGRSRGFGFVT S+V E +A Q
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 112 LDG 114
+G
Sbjct: 152 FNG 154
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++ + SL + F+KYG V E ++ DRE+ RSRGFGFVTF E+A A+ A
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|209364023|ref|YP_001424629.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
gi|207081956|gb|ABS78255.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
Length = 112
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 5 TMSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQ 64
Query: 107 SAIQALDG 114
A+ +G
Sbjct: 65 EAVSKANG 72
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 12 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 71
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 72 RPHKVDGRV 80
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LRE F KYG + ++ DR
Sbjct: 78 GRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDR 137
Query: 87 ETGRSRGFGFVTFS 100
++G+ RGF FVTF
Sbjct: 138 QSGKKRGFAFVTFD 151
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 51/67 (76%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++KLFV G+S + +L+ AF+ YG V + RII+++ T RS+GFGFV FST EEA++A+
Sbjct: 87 NNKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTAL 146
Query: 110 QALDGQV 116
+ ++G++
Sbjct: 147 KEMNGKI 153
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L +AF++YG + +++II DRETGRSRGFGFVTF+ + AI+
Sbjct: 9 RCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 101 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFD 153
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 41 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 100
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 101 RPHKVDGRV 109
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LRE F KYG + ++ DR++G+ RGF FVTF
Sbjct: 128 LTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 179
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 73
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + ++ DR
Sbjct: 80 GRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Query: 87 ETGRSRGFGFVTFS 100
++G+ RGF FVTF
Sbjct: 140 QSGKKRGFAFVTFD 153
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ +K ++G +SY++D+ +L + F Y V+ II DRETGR RGFGFVTF + EE
Sbjct: 4 MAENKCYIGNLSYSVDEQALEDKFHGYNVVD-VNIITDRETGRPRGFGFVTFGSKEEMEK 62
Query: 108 AIQALDGQ 115
AI DGQ
Sbjct: 63 AIDEFDGQ 70
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 42 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 101
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 102 RPHKVDGRV 110
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LRE F KYG + ++ DR++G+ RGF FVTF
Sbjct: 129 LTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 180
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+++V +++ +D++ L + F+++G + AR++ DRETGRSRGFGFVT S E + AI A
Sbjct: 207 RIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAA 266
Query: 112 LDGQ 115
LDGQ
Sbjct: 267 LDGQ 270
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +KLFVG +++D L F + G V A +I +R+T SRGFGFVT +TVEE
Sbjct: 103 VEPPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEE 162
Query: 105 ASSAIQALDG 114
A SA++ +G
Sbjct: 163 AESAVEKFNG 172
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L++G ++Y++ D SLR AF K+G V + +++ DRE+ RS+GFGFVTF E+A AI+
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 EMNEQ 66
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKL+VG ++Y + D L FA YG V A++++DR TGRSRGFGFV + +EA +AI
Sbjct: 3 SKLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIA 62
Query: 111 ALDGQ 115
L+G+
Sbjct: 63 GLNGK 67
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 53/75 (70%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
+ +R SS+KLFV G+SY+ ++ LR+AF ++G + E ++I D TG+SRG+GFV F +
Sbjct: 49 FLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVS 108
Query: 102 VEEASSAIQALDGQV 116
A++A + ++GQ+
Sbjct: 109 ETTAAAARKEMNGQI 123
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG + + +DD L E FA+ G V A+++ DRETGRSRGFGFV ST EEA +A++ L
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 113 DG 114
+G
Sbjct: 61 NG 62
>gi|196008419|ref|XP_002114075.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190583094|gb|EDV23165.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 91
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+KLFVGG+ Y+ DD+SLR FA +G + EA +I DR+TG+SRG+GFVT E A+ A
Sbjct: 7 TKLFVGGLPYHTDDDSLRGYFATFGEIEEAAVIYDRQTGKSRGYGFVTMVDKEGATRA 64
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
Length = 110
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D+ L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+P + +R KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGF
Sbjct: 4 HDPKEPEQLR-----KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 58
Query: 97 VTFSTVEEASSAI----QALDGQV 116
VT+S VEE ++A+ +DG+V
Sbjct: 59 VTYSCVEEVAAALCARPHKVDGRV 82
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVG +S+N DD L AF+ +G + +A+II DRETGRSRGFGFV+FS + AI+
Sbjct: 10 RCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEG 69
Query: 112 LDGQ 115
++G+
Sbjct: 70 MNGK 73
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +++ +D ++L F++ G V +A+++ DR++GRSRGFGFVT+S+ EE ++AI+
Sbjct: 188 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247
Query: 111 ALDGQVTFNASCV 123
+LDG V N +
Sbjct: 248 SLDG-VDLNGRAI 259
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + ++ D +L E F + G V +I D+ TGRSRGFGFVT S+ EE +A Q
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 112 LDG 114
+G
Sbjct: 148 FNG 150
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 54 FVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
+G +S+N +D++LR AF+++G V + ++ DRE+GRSRGFGFVTF T +EA +AI L+
Sbjct: 16 HIGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLN 75
Query: 114 GQ 115
Q
Sbjct: 76 EQ 77
>gi|428176294|gb|EKX45179.1| hypothetical protein GUITHDRAFT_152759 [Guillardia theta CCMP2712]
Length = 150
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
+ +K FV G+ + + LR+ FA++G + +A ++ DRETGRSRGFGFVTF+ + +
Sbjct: 56 LDPNKCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEA 115
Query: 108 AIQALD 113
AI A+D
Sbjct: 116 AITAMD 121
>gi|390470313|ref|XP_002755160.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Callithrix jacchus]
Length = 186
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F YG + +
Sbjct: 98 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEV 157
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FV F
Sbjct: 158 MEDRQSGKKRGFAFVAFD 175
>gi|390470311|ref|XP_003734270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Callithrix jacchus]
Length = 191
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F YG + +
Sbjct: 98 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEV 157
Query: 83 ILDRETGRSRGFGFVTFSTVEEASSAIQALDGQVTFN 119
+ DR++G+ RGF FV F + + L G+ + N
Sbjct: 158 MEDRQSGKKRGFAFVAF----DDHDTVDKLVGKKSHN 190
>gi|388495644|gb|AFK35888.1| unknown [Medicago truncatula]
Length = 92
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L +AF+K+G + ++++I DRETGRSRGFGFVTF+ + AI+
Sbjct: 9 RCFVGGLAWATDSRALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEE 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+ P + + + KLFVG +S+++ + L +AF +YG V AR++ D ETGRSRG+GF
Sbjct: 190 NKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGF 249
Query: 97 VTFSTVEEASSAIQALD 113
V FST EE +A+ AL+
Sbjct: 250 VCFSTKEEMEAALGALN 266
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+S+KL+ G + Y++D L YG ++ DR+TG+SRGF FVT S +E+ ++
Sbjct: 111 ASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAV 170
Query: 109 IQALDGQ 115
I+ LDG+
Sbjct: 171 IENLDGK 177
>gi|12845960|dbj|BAB26973.1| unnamed protein product [Mus musculus]
Length = 139
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+P + +R KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGF
Sbjct: 4 HDPKEPEQLR-----KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 58
Query: 97 VTFSTVEEASSAI----QALDGQV 116
VT+S VEE +A+ +DG+V
Sbjct: 59 VTYSCVEEVDAAMCARPHKVDGRV 82
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDR 86
+ DR
Sbjct: 136 MEDR 139
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +++ +D ++L F++ G V +A+++ DR++GRSRGFGFVT+S+ EE ++AI+
Sbjct: 194 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 253
Query: 111 ALDGQVTFNASCV 123
+LDG V N +
Sbjct: 254 SLDG-VDLNGRAI 265
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K+FVG + ++ D +L E F + G V +I D+ TGRSRGFGFVT S+ EE +A Q
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 112 LDG 114
+G
Sbjct: 148 FNG 150
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S+ LFV G+S +LREAF K+G V AR++ DR +G S+GFGFV ++T+E+A+
Sbjct: 49 PSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKG 108
Query: 109 IQALDGQ 115
I+ +DG+
Sbjct: 109 IEGMDGK 115
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 52/68 (76%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S SKLFVGG+SY+ ++ +L++AF+++G V E ++I TGRS+G+GFV FS+ EA++A
Sbjct: 28 SCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKGYGFVKFSSESEAAAA 87
Query: 109 IQALDGQV 116
++ + ++
Sbjct: 88 LEKMSNEL 95
>gi|212212428|ref|YP_002303364.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuG_Q212]
gi|212010838|gb|ACJ18219.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuG_Q212]
Length = 121
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 14 TMSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQ 73
Query: 107 SAIQALDG 114
A+ +G
Sbjct: 74 EAVSKANG 81
>gi|212218608|ref|YP_002305395.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuK_Q154]
gi|215919123|ref|NP_820178.2| nucleic acid binding domain-containing protein [Coxiella burnetii
RSA 493]
gi|206584008|gb|AAO90692.2| glycine-rich RNA-binding protein [Coxiella burnetii RSA 493]
gi|212012870|gb|ACJ20250.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuK_Q154]
Length = 117
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 47 CMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 14 TMSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQ 73
Query: 107 SAIQALDG 114
A+ +G
Sbjct: 74 EAVSKANG 81
>gi|150007582|ref|YP_001302325.1| RNA-binding protein rbpA [Parabacteroides distasonis ATCC 8503]
gi|255013892|ref|ZP_05286018.1| putative RNA-binding protein rbpA [Bacteroides sp. 2_1_7]
gi|298375526|ref|ZP_06985483.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|410101874|ref|ZP_11296802.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
gi|423331931|ref|ZP_17309715.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|149936006|gb|ABR42703.1| putative RNA-binding protein rbpA [Parabacteroides distasonis ATCC
8503]
gi|298268026|gb|EFI09682.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|409229772|gb|EKN22644.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|409239672|gb|EKN32456.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
Length = 123
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L++ +SYN+ D LR FA YG + A++I+DRETGRSRGFGFV S E A AI+ L
Sbjct: 3 LYISNLSYNISDEDLRLLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 113 DGQVTFNASCV 123
+ Q +++ +
Sbjct: 63 N-QASYDGKVI 72
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ +D +L++ F ++G V EA ++ DR+TGRSRGFGFV ++ +A A+
Sbjct: 2 SKLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMD 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG+++ D LR+AF KYG++ EA+++LD+ +GRSRGFGF+TF + AI A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 112 LDG 114
++G
Sbjct: 68 MNG 70
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+G + Y + ++ L++ FA YG V R+ +DRETGR RGF FV T E ++AIQAL
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIS 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 98 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 158 MEDRQSGKKRGFAFVTFD 175
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 24 QTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARII 83
Q+ + E S + P +KLFVG I + D+ ++ F+ YG V +A+I+
Sbjct: 100 QSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIV 159
Query: 84 LDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
DR++GRSRGFGFVT V +A +A++ LDG
Sbjct: 160 YDRDSGRSRGFGFVTMEKVGDAQTAMENLDG 190
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 31 SCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGR 90
S E ++ P + + SK++VG + + D L E +++G V+ +I D+ +GR
Sbjct: 7 SGEDDVAAPVAEEQL----GSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGR 62
Query: 91 SRGFGFVTFSTVEEASSAIQALDG 114
SRGF FVT ++ ++A + I ALDG
Sbjct: 63 SRGFAFVTMASHDDAQALINALDG 86
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 7 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 66
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 67 RPHKVDGRV 75
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 69 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 128
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 129 MEDRQSGKKRGFAFVTFD 146
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG +SYN +++LR F++YG V +II DR+TG S+GFGFV ST EEA +AI
Sbjct: 2 AKKLYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAAI 61
Query: 110 QA-----LDGQ 115
+ LDG+
Sbjct: 62 RGTNSTDLDGR 72
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIA 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|153208628|ref|ZP_01946885.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
gi|120575889|gb|EAX32513.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
Length = 103
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 1 MSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQE 60
Query: 108 AIQALDG 114
A+ +G
Sbjct: 61 AVSKANG 67
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 98 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 158 MEDRQSGKKRGFAFVTFD 175
>gi|165919016|ref|ZP_02219102.1| RNA-binding protein [Coxiella burnetii Q321]
gi|165917271|gb|EDR35875.1| RNA-binding protein [Coxiella burnetii Q321]
Length = 107
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 1 MSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQE 60
Query: 108 AIQALDG 114
A+ +G
Sbjct: 61 AVSKANG 67
>gi|161830439|ref|YP_001597044.1| RNA-binding protein [Coxiella burnetii RSA 331]
gi|161762306|gb|ABX77948.1| RNA-binding protein [Coxiella burnetii RSA 331]
Length = 107
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS +K++VG +SY++ + L+ F +YG + EA++I+DRETGRS+GF F+T+ T + A
Sbjct: 1 MSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQE 60
Query: 108 AIQALDG 114
A+ +G
Sbjct: 61 AVSKANG 67
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 98 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 158 MEDRQSGKKRGFAFVTFD 175
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 51/67 (76%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS SK++VG +SYN ++ LR+ F+++G + + ++I+D TGRS+GFGF+T++++++ S
Sbjct: 1 MSQSKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCES 60
Query: 108 AIQALDG 114
A+ +G
Sbjct: 61 AVTTANG 67
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 38 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMAA 97
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 98 RPHKVDGRV 106
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 125 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 176
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++ V +++ +D+ +L+ F + G V EAR I DRE+GRSRGFGFVTFS+ +E +SA
Sbjct: 57 SENRVHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSA 116
Query: 109 IQALDGQVTFNASCV 123
IQ+L+G V N +
Sbjct: 117 IQSLNG-VDLNGRAI 130
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F ++G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSA 87
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 88 RPHKVDGRV 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ LR+ F YG + ++ DR++G+ RGF FVTF
Sbjct: 115 LTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTF 166
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGG+++N D+ +L + F+ +G ++E ++ DRET RS+GF F+TF+ E AS A++A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRA 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGE 70
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS+N D+N+++E F+ +G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 368 SDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAF 427
Query: 110 QALDG 114
AL G
Sbjct: 428 NALQG 432
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SS LFVG +S+N+D+ LR F +G ++ RI+ DR++GRSRGFG+V F+ E+AS A
Sbjct: 263 SSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAF 322
Query: 110 QA 111
+A
Sbjct: 323 KA 324
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG +S++ D+ L +AF+ YG + + ++ DR++GRSRGFGFVTF T +EA +AI
Sbjct: 2 AKVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIM 61
Query: 111 ALDGQ 115
AL+ Q
Sbjct: 62 ALNEQ 66
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 50/72 (69%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LF+GG+S ++SL EAF++YG V EA I+ D+ T R +GFGFV F++ E A+ A +
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 112 LDGQVTFNASCV 123
++G+ +F C+
Sbjct: 98 MNGKASFLKQCI 109
>gi|57335957|emb|CAH25380.1| putative glycine-rich RNA-binding protein [Guillardia theta]
Length = 152
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
+ +K FV G+ + + LR+ FA++G + +A ++ DRETGRSRGFGFVTF+ + +
Sbjct: 58 LDPNKCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEA 117
Query: 108 AIQALD 113
AI A+D
Sbjct: 118 AITAMD 123
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LF G +S+ +DDN+L EAF +G + AR++ D+ TGRSRGFG+V F E A+ A +A+
Sbjct: 205 LFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEAM 264
Query: 113 DGQ 115
GQ
Sbjct: 265 QGQ 267
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 44/65 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LFVG + ++ + +++R+ F++ V R+ D ++G +GFG+VTF+++E+A SA+
Sbjct: 307 SDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAKSAL 366
Query: 110 QALDG 114
A +G
Sbjct: 367 DAKNG 371
>gi|332664392|ref|YP_004447180.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332333206|gb|AEE50307.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 130
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FV +S++ D+ LREAF +YG V+ A+II+D+ TGRS+GFGFV +EA +AI+ L
Sbjct: 3 IFVAKLSFDTQDDDLREAFEQYGIVDSAKIIVDQSTGRSKGFGFVEMPNDDEALNAIEGL 62
Query: 113 D 113
D
Sbjct: 63 D 63
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS+N D+N+++E F+ +G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 366 SDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAF 425
Query: 110 QALDG 114
AL G
Sbjct: 426 NALQG 430
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SS LFVG +S+N+D+ LR F +G ++ RI+ DR++GRSRGFG+V F+ E+AS A
Sbjct: 261 SSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAF 320
Query: 110 QA 111
+A
Sbjct: 321 KA 322
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 96 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 155
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 156 RPHKVDGRV 164
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + ++ DR
Sbjct: 162 GRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 221
Query: 87 ETGRSRGFGFVTFS 100
++G+ RGF FVTF
Sbjct: 222 QSGKKRGFAFVTFD 235
>gi|255945479|ref|XP_002563507.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588242|emb|CAP86342.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 95
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SK++VG +S++ D SLR+AF ++G + ++ +++DRETGRSRGFGFVT+S+ EEA +AI
Sbjct: 2 SKIYVGNLSWHTSDESLRQAFGEFGQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAIN 61
Query: 111 ALDGQ 115
AL+ Q
Sbjct: 62 ALNEQ 66
>gi|430741539|ref|YP_007200668.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430013259|gb|AGA24973.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 119
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG ++YN++++ L F+++G V A+II+DR+T RS+GFGFV T +A +AI
Sbjct: 2 AKKLYVGNLTYNVNESDLEALFSQFGTVQSAQIIVDRDTNRSKGFGFVEMDTDAQAQAAI 61
Query: 110 QALDGQ 115
Q L+G
Sbjct: 62 QGLNGH 67
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + ++ DR
Sbjct: 102 GRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 161
Query: 87 ETGRSRGFGFVTF 99
++G+ RGF FVTF
Sbjct: 162 QSGKKRGFAFVTF 174
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+P + +R KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGF
Sbjct: 4 HDPKELEQLR-----KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 58
Query: 97 VTFSTVEEASSAI----QALDGQV 116
VT+S VEE +A+ +DG+V
Sbjct: 59 VTYSCVEEVDAAMCARPHKVDGRV 82
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSLKPGAHLTVKKIFVGGIKEDTEEYYLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+ DR++G+ RGF FVTF + +Q
Sbjct: 136 MEDRQSGKKRGFAFVTFDDHDTVDKIVQ 163
>gi|302036839|ref|YP_003797161.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|190343253|gb|ACE75641.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|300604903|emb|CBK41236.1| RNA-binding protein [Candidatus Nitrospira defluvii]
Length = 107
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VGG+ Y ++ L F+ +G V AR+I D+ TG+SRGFGFV ST EEA +AI
Sbjct: 3 NKLYVGGLPYAATESQLSNLFSAHGTVESARVITDKFTGQSRGFGFVEMSTAEEAKAAIT 62
Query: 111 ALDG------QVTFN 119
AL+G Q+T N
Sbjct: 63 ALNGSDMDGRQLTVN 77
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD L++AF+ +G + +++II DRETGRSRGFGFVTF++ + AI+
Sbjct: 7 RCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEG 66
Query: 112 LDGQ 115
++G+
Sbjct: 67 MNGK 70
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVGGI++ D+ +L E FAKYG V+E +I +R+T RS+GFGFVTF ++A A+
Sbjct: 6 KLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAG 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKT 70
>gi|406946955|gb|EKD77999.1| glycine-rich RNA-binding protein, partial [uncultured bacterium]
Length = 107
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS SK++VG +SYN ++ LR+ F++YG + E ++I+D TGRS+GFGF+T+ + ++ +
Sbjct: 1 MSQSKIYVGNLSYNTTEDGLRDYFSQYGTIEEIKLIIDFNTGRSKGFGFITYGSAQDCEN 60
Query: 108 AIQA----LDGQ 115
A+ A LDG+
Sbjct: 61 ALAANGVELDGR 72
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 44 AIRCMS------SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
A+R MS S KLFV G+S D LREAF+K+G V EAR++ D+ G S+GF FV
Sbjct: 34 AVRGMSTEPADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFV 93
Query: 98 TFSTVEEASSAIQALDGQ 115
++T EEA + +DG+
Sbjct: 94 RYATQEEADKGKEGMDGK 111
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+FVG ++ +D+N+L+ AFA YG ++EA++I D +T +S+G+GFV+F + E A AI
Sbjct: 135 HVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAG 194
Query: 112 LDGQV 116
++GQ+
Sbjct: 195 MNGQL 199
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ A R ++S ++VG + + + LREAFA G ++E RI + +G+ FV ++
Sbjct: 230 VFNATRADNTS-VYVGNVHSSTTEEDLREAFASIGAISEVRIF------KQQGYAFVRYA 282
Query: 101 TVEEASSAIQALDGQ 115
T E A+ AI ++G+
Sbjct: 283 TKEAATRAIMQMNGK 297
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+ +FVGG+ +++D++ L++ FAK+G + A +++DR+TG SRGFG+V F+T E+A A +
Sbjct: 3 TSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKE 62
Query: 111 ALDG 114
+DG
Sbjct: 63 EMDG 66
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS LFVG +S++ ++++ F +YG V R+ + ETGR +GFG+V F +E A A
Sbjct: 104 PSSTLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAKKA 162
Query: 109 IQALDG 114
+AL G
Sbjct: 163 YEALAG 168
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG ++Y++ DN L +AF ++G + A+++++R+TGRS+GFGFV T EA +A++A
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVEA 63
Query: 112 LDGQ 115
++G
Sbjct: 64 MNGH 67
>gi|149639709|ref|XP_001515278.1| PREDICTED: hypothetical protein LOC100084860 [Ornithorhynchus
anatinus]
Length = 327
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 96 RPHKVDGRV 104
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + +IS + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|76157398|gb|AAX28335.2| SJCHGC05136 protein [Schistosoma japonicum]
Length = 184
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVGG+ Y+ D SLR F ++G ++EA +I DR+TG+SRG+GFVT S E+A AI+
Sbjct: 12 TKIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGYGFVTMSRTEDALLAIR 71
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSK++VG + Y++ D++L F+++G V A++++DRETGRS+GFGFV ++ E A +AI
Sbjct: 2 SSKIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 110 QALDG 114
L G
Sbjct: 62 TGLHG 66
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY + + L E FA+YG V ++ DRETGR RGFGFV ST +E ++AI AL
Sbjct: 3 IYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRETGRMRGFGFVEMSTDDEETAAIDAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 19 GNILRQTAGKRISCESSIS-NPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYV 77
G LR G ESS S P + S ++++VG +S+N+D+ +L F + G V
Sbjct: 158 GRTLRVNFGPPPQKESSFSRGPRGGETFD--SGNRVYVGNLSWNVDNLALETLFREKGRV 215
Query: 78 NEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
+A+++ DR++GRSRGFGFVT+S+ EE +AI +L+G
Sbjct: 216 MDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNG 252
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L F G V +I D+ TGRSRGFGFVT +T+EE +A +
Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150
Query: 112 LDG 114
+G
Sbjct: 151 FNG 153
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 12 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 71
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 72 RPHKVDGRV 80
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 74 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 133
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 134 MEDRQSGKKRGFAFVTFD 151
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY M ++ LR AF ++G V++ RII D +TGRS+GFGFV + EA++AI+AL
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 113 DGQ 115
+G+
Sbjct: 63 NGR 65
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ +S+ + D LRE FA+YG ++ A++I DRETG+SRGFGFV T EA AI+ L
Sbjct: 3 IFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEEL 62
Query: 113 DGQVTFNASCV 123
D Q ++ +
Sbjct: 63 D-QAEYDGKVI 72
>gi|393788491|ref|ZP_10376619.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
gi|392655108|gb|EIY48753.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
Length = 115
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ G+SYN+ D+ L E FA+YG V AR+I DRETGRS+G+GFV + E + AI AL
Sbjct: 3 IFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGNKAISAL 62
Query: 113 D 113
+
Sbjct: 63 N 63
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
++ LFV G+S + LRE FAK+G V AR++ DR +G S+GFGFV ++T+E+A+
Sbjct: 47 PNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKG 106
Query: 109 IQALDGQ 115
I+ +DG+
Sbjct: 107 IEGMDGK 113
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S LFV G+S LR+AFAK+G V AR++ DR +G S+GFGFV ++T EEA+
Sbjct: 33 PSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKG 92
Query: 109 IQALDGQ 115
I+ +DG+
Sbjct: 93 IEGMDGK 99
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSK+FVG + +++D+ L E FAK+G V A++I+DR +GRSRG+GFV F+ A +A+
Sbjct: 2 SSKIFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAAV 61
Query: 110 QALDGQ 115
++ Q
Sbjct: 62 DGMNDQ 67
>gi|399758|gb|AAB27595.1| FBRNP [Homo sapiens]
Length = 269
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S V E +AI A
Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGFVTYSCVTEVDAAIGA 95
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 96 RPFKVDGRV 104
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVG I + ++ +LR+ F KYG + ++ DR++G+ RGF VTF
Sbjct: 123 LTVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFD 175
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S+ + +VG + + +D+ L + F+++G V A ++ DRETGRSRGFGFVT ++ EE A
Sbjct: 200 SAFRAYVGNLPWQAEDSRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDA 259
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 260 ISALDGQ 266
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RE+G+SRGFGFVT ST+EEA AI+
Sbjct: 108 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 167
>gi|425781927|gb|EKV19861.1| hypothetical protein PDIG_00280 [Penicillium digitatum PHI26]
gi|425784024|gb|EKV21834.1| hypothetical protein PDIP_02540 [Penicillium digitatum Pd1]
Length = 98
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 52/65 (80%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SK++VG +S++ D SLR AF ++G + ++ +++DRETGRSRGFGFVTFS+ EEA +AI
Sbjct: 2 SKIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSAEEAEAAIN 61
Query: 111 ALDGQ 115
AL+ Q
Sbjct: 62 ALNEQ 66
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG + + +DD L E FA+ G V A+++ DRETGRSRGFGFV ST EEA +A++ L
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 113 DG 114
+G
Sbjct: 61 NG 62
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S++ + SL +AF+KYG + + +RET RSRGFGFVTF ++A A++
Sbjct: 6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65
Query: 112 LDGQ 115
++G+
Sbjct: 66 MNGK 69
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++++VG +S+ +DD +L FA+ G V EAR+I DR++GRS+GFGFVT+++ +E +AI
Sbjct: 204 NRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAIN 263
Query: 111 ALDG 114
+L+G
Sbjct: 264 SLNG 267
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +N+D L + F G V +I D+ TGRSRGFGFVT S+V E +A
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQ 151
Query: 112 LDG 114
+G
Sbjct: 152 FNG 154
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
SS + +VG + + +D+ L + F+++G V A ++ DRETGRSRGFGFVT ++ E+ SA
Sbjct: 95 SSFRAYVGNLPWQAEDSRLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDSA 154
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 155 ISALDGQ 161
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RE+G+SRGFGFVT ST+EEA AI+
Sbjct: 3 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 62
Query: 111 ALD 113
+
Sbjct: 63 TFN 65
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +K++VG +++ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + EE ++A
Sbjct: 77 SGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNA 136
Query: 109 IQALDG 114
I LDG
Sbjct: 137 ISNLDG 142
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 82 IILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
++ DR TGRSRGFGFVT S+ EEA +A++ +G
Sbjct: 4 VVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNG 36
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L +AF++YG + +++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ M D SLR F ++G + + ++ D T RSRGFGFVT++TVEE +A+ A
Sbjct: 15 KLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 75 RPHKVDGRV 83
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + +++ LR+ F +YG + I+ DR +G+ RGF FVTF
Sbjct: 102 LTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFD 154
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D L+EAF++YG + +++II DRETGRSRGFGFVTF + AI
Sbjct: 8 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 112 LDGQ 115
++GQ
Sbjct: 68 MNGQ 71
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D L+EAF++YG + +++II DRETGRSRGFGFVTF + AI
Sbjct: 8 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 112 LDGQ 115
++GQ
Sbjct: 68 MNGQ 71
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri boliviensis
boliviensis]
Length = 159
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 48 MSS--SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
MSS KLFV G+++N D+ L + F+ +G ++E ++ DRET RSRGFGF+TF+ E A
Sbjct: 1 MSSEEGKLFVAGLNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHA 60
Query: 106 SSAIQALDGQ 115
S A++A++G+
Sbjct: 61 SVAMKAMNGE 70
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
MS+SKL+VG +S+ ++ LR AF ++G V + + +D+ TGR RGF FVT ST EEA
Sbjct: 1 MSNSKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKI 60
Query: 108 AIQALDG 114
A + L+G
Sbjct: 61 AAEKLNG 67
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
SSK++VG + Y++ D SL+ F+++G V+ A++++DRETGRS+GFGFV + E A +AI
Sbjct: 2 SSKIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAI 61
Query: 110 QALDG 114
L G
Sbjct: 62 SGLHG 66
>gi|321443204|gb|EFX60016.1| hypothetical protein DAPPUDRAFT_39159 [Daphnia pulex]
Length = 91
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVGG+ Y+ D +L+ F K+G + EA +I DR+TG+SRG+GFVT T E A +AI+
Sbjct: 5 TKIFVGGLPYHTTDETLKAFFLKFGNIEEAVVITDRQTGKSRGYGFVTMETPEAAQNAIR 64
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 51/66 (77%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +K++VG +++ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + EE ++A
Sbjct: 181 SGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNA 240
Query: 109 IQALDG 114
I LDG
Sbjct: 241 ISNLDG 246
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG + +++D L F + G V ++ DR TGRSRGFGFVT S+ EEA +A++
Sbjct: 78 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 137
Query: 112 LDG 114
+G
Sbjct: 138 FNG 140
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A SAI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIA 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 145 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 204
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 205 KTQHILDGKV 214
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 229 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 288
Query: 110 Q 110
Q
Sbjct: 289 Q 289
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG +SYN ++ LR F+++G V ++II DRETG S+GFGF+ T EEAS+AI
Sbjct: 2 AKKLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAI 61
Query: 110 QALDGQ 115
+G+
Sbjct: 62 AGTNGR 67
>gi|428181461|gb|EKX50325.1| RNA recognition motif 1 [Guillardia theta CCMP2712]
Length = 199
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFV G+S+ +DD L EAF ++G EA++++DR +GRSRGFGFVTFS A+ AI+
Sbjct: 89 KLFVSGLSWEVDDQQLMEAFQEFGNC-EAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEE 147
Query: 112 LDGQ 115
++G+
Sbjct: 148 MNGR 151
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 52/65 (80%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+SY+ ++ +L++AF+++G++ + ++I TG+S+G+GFV F++ +EA++A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 112 LDGQV 116
+ G+V
Sbjct: 98 MGGEV 102
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S++LFV +S D SLR+ F+ +G + EAR+I D ET R +GFGF+TF + ++A A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKAL 65
Query: 110 QALDGQV 116
++LDG++
Sbjct: 66 KSLDGKI 72
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG + ++ ++ LRE FA YG V+ R++ DR+TGR RGFGFVT S +A+SAI+AL
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDT-DAASAIEAL 62
Query: 113 DGQ 115
DG+
Sbjct: 63 DGK 65
>gi|241766570|ref|ZP_04764427.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363174|gb|EER58765.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 125
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++ F++YG V A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
+ GQ
Sbjct: 63 GVHGQ 67
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 49/63 (77%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A +AI
Sbjct: 283 AKLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIA 342
Query: 111 ALD 113
+++
Sbjct: 343 SMN 345
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D+ L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D L+EAF++YG + +++II DRETGRSRGFGFVTF + AI
Sbjct: 7 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 160 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 219
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 220 KTQHILDGKV 229
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 244 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 303
Query: 110 Q 110
Q
Sbjct: 304 Q 304
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Query: 33 ESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSR 92
+SSI+NP +A K+F+GG+++ +++LR+ F+KYG V + +I+ D TGRSR
Sbjct: 141 QSSITNP--VKADLSRDICKMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSR 198
Query: 93 GFGFVTF---STVEEASSAIQALDGQV 116
GFGF+TF S+V+E LDG+V
Sbjct: 199 GFGFLTFDEPSSVDEVVKTQHILDGKV 225
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E FA++G + +A+++LD++TGRSRGFGFVT+ + +
Sbjct: 240 TGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVC 299
Query: 110 Q 110
Q
Sbjct: 300 Q 300
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S +++VG + + +D L E F+++G V A+++ D ETGRSRGFGFVT S+ E + A
Sbjct: 208 PSYRIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDA 267
Query: 109 IQALDGQ 115
I ALDGQ
Sbjct: 268 IAALDGQ 274
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 45 IRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEE 104
+ +K++VG + Y++ L F + G V + +I + ET SRGFGFVT STVEE
Sbjct: 110 VEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMSTVEE 169
Query: 105 ASSAIQA-----LDGQV 116
+ AI+ LDG++
Sbjct: 170 SDKAIEMFNRYNLDGRL 186
>gi|156367085|ref|XP_001627250.1| predicted protein [Nematostella vectensis]
gi|156214154|gb|EDO35150.1| predicted protein [Nematostella vectensis]
Length = 259
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
M+ K ++G +SY++D+ +L E F Y V + ++I DRETGR RGFGFVTF + +E
Sbjct: 109 MAEYKCYIGNLSYSVDEQALEEKFHGYNVV-DVKVITDRETGRPRGFGFVTFGSEDEMDK 167
Query: 108 AIQALDGQ 115
AI DG+
Sbjct: 168 AIDKFDGE 175
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 52/65 (80%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+SY+ ++ +L++AF+++G++ + ++I TG+S+G+GFV F++ +EA++A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 112 LDGQV 116
+ G+V
Sbjct: 98 MGGEV 102
>gi|171915150|ref|ZP_02930620.1| RNA-binding protein (RRM domain) [Verrucomicrobium spinosum DSM
4136]
Length = 158
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 62 MDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
M DN LRE+F +YG V+ ARIILDRETGRSRGF FV EEA +AI L+
Sbjct: 1 MTDNELRESFERYGLVSHARIILDRETGRSRGFAFVEMPNDEEARAAINGLN 52
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|351694477|gb|EHA97395.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 282
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
+P + +R KLF+GG+S+ D+SLRE F K+G + ++ D +T RSRGFGF
Sbjct: 26 HDPKEPEQLR-----KLFIGGLSFETTDDSLREHFEKWGTLTNCAVMRDPQTKRSRGFGF 80
Query: 97 VTFSTVEEASSAI----QALDGQV 116
VT+S VEE +A+ +DG+V
Sbjct: 81 VTYSCVEEVDAAMCARPHKVDGRV 104
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG ++ DR
Sbjct: 102 GRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKTETMEVMEDR 161
Query: 87 ETGRSRGFGFVTFSTVEEASSAIQ 110
++G+ RGF F TF + +Q
Sbjct: 162 QSGKKRGFAFATFDDHDTVDKIVQ 185
>gi|116206982|ref|XP_001229300.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
gi|88183381|gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A AI+
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L +AF++YG + +++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|407941454|ref|YP_006857095.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899248|gb|AFU48457.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 125
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++ F++YG V A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
+ GQ
Sbjct: 63 GVHGQ 67
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG++++ D L++AF KYG + EA++++D+ +GRSRGFGFVTF E AI+A
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 112 LDG 114
++G
Sbjct: 290 MNG 292
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 52/73 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D+ L +AF+++G V+ A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|115462709|ref|NP_001054954.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|55733832|gb|AAV59339.1| unknown protein [Oryza sativa Japonica Group]
gi|113578505|dbj|BAF16868.1| Os05g0223200 [Oryza sativa Japonica Group]
gi|215741183|dbj|BAG97678.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 104
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
S+++VG + Y D+ SL+++F+ YG V+ + I +DRETGRSRGFGFV+F + AS AI+
Sbjct: 23 SRVYVGNLPYRADERSLKDSFSNYGAVS-SEIAVDRETGRSRGFGFVSFQDSKSASDAIK 81
Query: 111 ALDGQ 115
++GQ
Sbjct: 82 GMNGQ 86
>gi|395005502|ref|ZP_10389379.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394316555|gb|EJE53276.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 130
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++ F++YG V A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
+ GQ
Sbjct: 63 GVHGQ 67
>gi|89902981|ref|YP_525452.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
gi|89347718|gb|ABD71921.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
Length = 140
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y D L++AFA +G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYTFRDEDLQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS+ D+N+++E F+ YG ++ R+ D E+GR +GFG++ FS+V+EA SA+
Sbjct: 369 SDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSAL 428
Query: 110 QALDG 114
L G
Sbjct: 429 NELQG 433
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 31 SCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGR 90
S E ++ + + +S+ LFVG +S+N+D+ LR F +G ++ RI+ DR++GR
Sbjct: 245 SDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGR 304
Query: 91 SRGFGFVTFSTVEEASSAIQALDG 114
SRGFG+V F+ E+A+ A +A G
Sbjct: 305 SRGFGYVEFTNAEDAAKAFEAKKG 328
>gi|393784278|ref|ZP_10372444.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
gi|392666318|gb|EIY59833.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
Length = 115
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ G+SYN+ D+ L E FA+YG V AR+I DRETGRS+G+GFV + E AI AL
Sbjct: 3 IFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGDKAIAAL 62
Query: 113 D 113
+
Sbjct: 63 N 63
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIS 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG ++Y++ D SL++ FA+ G V A++++DR++GRS+GFGFV + EEA +AI+
Sbjct: 3 NKLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIR 62
Query: 111 ALDG 114
L G
Sbjct: 63 KLHG 66
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 38 NPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFV 97
+P + R +LFVG + Y L + FA+ G V++A+II D+ T RSRGF FV
Sbjct: 97 SPPRSRPTRGDDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFV 156
Query: 98 TFSTVEEASSAIQALDGQV 116
T +T EEA+ AIQ DG +
Sbjct: 157 TMATAEEAAKAIQMFDGAL 175
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++ G + + + ++LR F + +AR+I +RETGRSRGFGFV+F T E+A +A++A
Sbjct: 210 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEA 269
Query: 112 LDG 114
LDG
Sbjct: 270 LDG 272
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ DD SL AF+ YG + +++II DRETGRS GFGF+TFS+ + AI+
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEG 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|226482446|emb|CAX73822.1| RNA binding motif protein 24 [Schistosoma japonicum]
Length = 468
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVGG+ Y+ D SLR F ++G ++EA +I DR+TG+SRG+GFVT S E+A AI+
Sbjct: 12 TKIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGYGFVTMSRTEDALLAIR 71
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 32 CESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRS 91
S +S Y AI + S G++++ D SLR F K+G V+ A ++ DR+TGRS
Sbjct: 10 LPSDLSLYPAYIAIGSANQSNRTNSGLAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRS 69
Query: 92 RGFGFVTFSTVEEASSAIQALDGQ 115
RGFGFVTF++ +EA +A+ L+ Q
Sbjct: 70 RGFGFVTFTSPQEADAALNELNNQ 93
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V A ++ DRE+GRSRGFGFV+ ++ EE AI A
Sbjct: 222 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 281
Query: 112 LDGQ 115
LDGQ
Sbjct: 282 LDGQ 285
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST+EEA AI+
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 112 LD 113
L+
Sbjct: 188 LN 189
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+ LFVG +S+ M+D++L EAF+++G V R+ DRE+GR +GFG+V FS VE A A
Sbjct: 432 SATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAH 491
Query: 110 QALDG 114
A+ G
Sbjct: 492 AAMQG 496
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG +S+N+D++ L + FA+ G V A + +DR TGRSRGFG+V FST E AI+ L
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE-L 393
Query: 113 DGQ 115
+G+
Sbjct: 394 NGK 396
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ ++ SL AF KYG + + +I D+ETGRSRGFGFV + ++A A++
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEG 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKT 70
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V A ++ DRE+GRSRGFGFV+ ++ EE AI A
Sbjct: 223 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 282
Query: 112 LDGQ 115
LDGQ
Sbjct: 283 LDGQ 286
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST+EEA AI+
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 112 LD 113
L+
Sbjct: 189 LN 190
>gi|156061483|ref|XP_001596664.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980]
gi|154700288|gb|EDO00027.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 193
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 7/79 (8%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF------STVEE 104
SKLF+GG++++ D+++LR+ F+++G V EA ++ DR+TGRSRGFGFV F S +
Sbjct: 2 SKLFIGGLAWHTDEDALRKKFSEFGNVEEAVVVKDRDTGRSRGFGFVRFGQGSDSSPEAD 61
Query: 105 ASSAIQALDGQVTFNASCV 123
A AIQ ++ V F+ +
Sbjct: 62 AEKAIQEMN-SVEFDGRTI 79
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D+ SL AF+++G + +++II DRETGRSRGFGFVTF + AI+
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 112 LDGQ 115
++GQ
Sbjct: 69 MNGQ 72
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D+ L +AF ++G V A+++++R+TGRS+GFGFV EA +AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F ++G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 15 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMTA 74
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 75 RPHKVDGRV 83
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + ++ LR+ F YG + ++ DR++G+ RGF FVTF
Sbjct: 102 LTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFD 154
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV + +A SAI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIA 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ ++ SL AF KYG + + +I D+ETGRSRGFGFV + ++A A++
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEG 65
Query: 112 LDGQV 116
++G+
Sbjct: 66 MNGKT 70
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D+ L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride IMI
206040]
Length = 171
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV F +A +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRFVQEADAQAAID 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRTI 73
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+++ VG +++ +D+ +L F + G V +A++I DRE+GRSRGFGFVTFS+ +E +SAI+
Sbjct: 218 NRVHVGNLAWGVDNAALESLFREQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIR 277
Query: 111 ALDG 114
+LDG
Sbjct: 278 SLDG 281
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
K+FVG + +++D L E F G V +I D+ TG SRGF FVT
Sbjct: 88 KVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVT 134
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 218 KTQHILDGKV 227
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 242 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301
Query: 110 Q 110
Q
Sbjct: 302 Q 302
>gi|315635463|ref|ZP_07890729.1| RNA-binding protein [Arcobacter butzleri JV22]
gi|315480221|gb|EFU70888.1| RNA-binding protein [Arcobacter butzleri JV22]
Length = 98
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY M+D L FAK+G V A++I+D+ETGRS+GF FV + + AI+AL
Sbjct: 13 IYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEAL 72
Query: 113 DG 114
+G
Sbjct: 73 NG 74
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS++ D+N + EAF+++G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 362 SDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 421
Query: 110 QALDG 114
Q L+G
Sbjct: 422 QTLNG 426
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
LFVG +S+N+D+ LR F ++G ++ RI+ DR++GRSRGFG+V F
Sbjct: 261 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEF 307
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++K++VG + Y++ D+SL FA++G V A++++DRETGRS+GFGFV ++ E A +AI
Sbjct: 2 TTKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 110 QALDG 114
L G
Sbjct: 62 TGLHG 66
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS++ D+N + EAF+++G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 364 SDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 423
Query: 110 QALDG 114
Q L+G
Sbjct: 424 QTLNG 428
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
LFVG +S+N+D+ LR F ++G ++ RI+ DR++GRSRGFG+V F
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEF 309
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ LFV G+S LRE FAK+G V AR++ DR +G S+GFGFV ++T+EEA+ I
Sbjct: 48 NPNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGI 107
Query: 110 QALDGQ 115
+ +DG+
Sbjct: 108 EGMDGK 113
>gi|157736330|ref|YP_001489013.1| RNA recognition motif-containing protein [Arcobacter butzleri
RM4018]
gi|384154771|ref|YP_005537586.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
gi|157698184|gb|ABV66344.1| RNA-binding region RNP-1 (RNA recognition motif) [Arcobacter
butzleri RM4018]
gi|345468325|dbj|BAK69776.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
Length = 98
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+++ ++ ++VG +SY M+D L FAK+G V A++I+D+ETGRS+GF FV +
Sbjct: 1 MFKLLKRTIEMNIYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMA 60
Query: 101 TVEEASSAIQALDG 114
+ AI+AL+G
Sbjct: 61 DAKAGKDAIEALNG 74
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 25 TAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
+A K+ E I ++S LF G +S+N+DDN+L EAF + + AR++
Sbjct: 241 SASKKRKAEEEIDATPKKAKTDEQAASTLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVT 300
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDG 114
DR+ GRSRGFG+V F T E A+ A +A+ G
Sbjct: 301 DRDGGRSRGFGYVDFETAEAATKAYEAMQG 330
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G + ++ D ++R+ FA+ V R+ D ++G +GFG+VTF++VE+A +
Sbjct: 371 SETLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKNVF 430
Query: 110 QALDG 114
Q L+G
Sbjct: 431 QQLNG 435
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
S ++ RC F+GG+S++ D SL+EAF K+G++ EA++++D+ +GRSRGFGFV+F
Sbjct: 2 SEHEEYRC------FIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSF 55
Query: 100 STVEEASSAIQALDG 114
+ AI+ + G
Sbjct: 56 DDKQAMEDAIKEMHG 70
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++ G +S+ MD L++ +YG V ++R+I DRETGRSRGFGFVT S+ E+A +
Sbjct: 147 KVYFGNLSWGMDHLDLQDLCGEYGEVADSRLITDRETGRSRGFGFVTMSSAEQAEKVVNG 206
Query: 112 LDGQ 115
L+GQ
Sbjct: 207 LNGQ 210
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG +S+ +DD+ L + FA+Y A +I D TGRSRGFGFV + E A AI
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEYDASGIA-VISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 112 LDG 114
LDG
Sbjct: 103 LDG 105
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S++LFV +S D SLR+ F+ +G + EAR+I D ET R +GFGF+TF + ++A A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 110 QALDGQV 116
++LDG++
Sbjct: 66 KSLDGKI 72
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ ++ +L +AFA +G V ++++I DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG ++Y++ DN L +AF ++G + A+++++R+TGRS+GFGFV + EA +AI+A
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 112 LDGQ 115
++G
Sbjct: 64 MNGH 67
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG ++Y++ DN L +AF ++G + A+++++R+TGRS+GFGFV + EA +AI+A
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 112 LDGQ 115
++G
Sbjct: 64 MNGH 67
>gi|444723112|gb|ELW63776.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 300
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+
Sbjct: 37 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 96
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 97 RPHKVDGRV 105
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F K+G + +
Sbjct: 99 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKFGKIETIEV 158
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 159 MEDRQSGKKRGFAFVTFD 176
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV + ++A AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVGG+S++ + +L AF++YG V E +++L+R+TGRSRGFGFVTFS +AI+
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 112 L 112
+
Sbjct: 68 M 68
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ + L E FA+YG V + I DRETGRSRGFGFV +E + AI+AL
Sbjct: 3 IYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G I+++ ++N + EAFA++G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 362 SDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 421
Query: 110 QALDG 114
QAL+G
Sbjct: 422 QALNG 426
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 33 ESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSR 92
E +S P + + LF+G +S+N+D+ LR F ++G + RI+ DR++GRSR
Sbjct: 242 EEEVSAPKKTK-VDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSR 300
Query: 93 GFGFVTFS 100
GFG+V F+
Sbjct: 301 GFGYVEFT 308
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 111 ALDGQVTFNASCV 123
A++ V F+ +
Sbjct: 62 AMN-NVEFDGRNI 73
>gi|307107921|gb|EFN56162.1| hypothetical protein CHLNCDRAFT_22355 [Chlorella variabilis]
Length = 191
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 7/74 (9%)
Query: 39 PSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVT 98
P+ Q +C FVGGIS+++DD+ LREAFA++ +A +++D+ TGRSRGFGFV
Sbjct: 13 PAPVQQHKC------FVGGISWHLDDHKLREAFAEFN-PTDAVVMMDKMTGRSRGFGFVM 65
Query: 99 FSTVEEASSAIQAL 112
F + +AI+A+
Sbjct: 66 FGDKRDQDAAIEAM 79
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+++LFV +S D SLR+ FA +G + EAR+I D++T R +GFGF+TF + ++A +A+
Sbjct: 6 TTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNAL 65
Query: 110 QALDGQV 116
+AL+G++
Sbjct: 66 KALNGKI 72
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G I+++ ++N + EAFA++G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 334 SDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 393
Query: 110 QALDG 114
QAL+G
Sbjct: 394 QALNG 398
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
LF+G +S+N+D+ LR F ++G + RI+ DR++GRSRGFG+V F+
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFT 280
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 23 RQTAGKRISCESSISNP-----------SIYQAIRCMSSSKLFVGGISYNMDDNSLREAF 71
++ G+ I+ + S S P S Y R S LF+G +S+ D ++L E F
Sbjct: 190 KEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPPSDTLFLGNLSFQADRDTLFELF 249
Query: 72 AKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQVTFN 119
+K+G V RI ET + +GFG+V FS+V+EA+ A++AL+G+ N
Sbjct: 250 SKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYVDN 297
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
LFVG +S+++DD L++ F G V AR++++R TGRSRG+G+V F A A++ +
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 113 DGQ 115
G+
Sbjct: 188 QGK 190
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 112 LDGQV 116
+V
Sbjct: 74 RPHKV 78
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|46106940|ref|XP_380618.1| hypothetical protein FG00442.1 [Gibberella zeae PH-1]
Length = 206
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A +AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|427419212|ref|ZP_18909395.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425761925|gb|EKV02778.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ D L AFA YG V + DRETGR RGFGFV ST E +AI+AL
Sbjct: 3 IYVGNLSYDVTDADLTTAFAAYGTVKSVHLPTDRETGRMRGFGFVEMSTDSEEDAAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|407005316|gb|EKE21467.1| RNA-binding protein, partial [uncultured bacterium]
Length = 76
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG + Y + D L + FA+ G V A II D+ TGRS+GFGFV S EEA+ AI
Sbjct: 2 AKKLYVGNLPYTLKDADLNQLFAQAGAVESAVIINDKATGRSKGFGFVEMSADEEATKAI 61
Query: 110 QALDGQ 115
+ DGQ
Sbjct: 62 EMFDGQ 67
>gi|294936219|ref|XP_002781663.1| hypothetical protein Pmar_PMAR000044 [Perkinsus marinus ATCC 50983]
gi|239892585|gb|EER13458.1| hypothetical protein Pmar_PMAR000044 [Perkinsus marinus ATCC 50983]
Length = 564
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ- 110
K+F GG+ +D LR+ F +YG V + + +DR +GRSRGFG+VTF T EA +AIQ
Sbjct: 299 KVFCGGLPATVDRERLRQHFVRYGVVTDCIVKIDRTSGRSRGFGYVTFQTPAEAQAAIQG 358
Query: 111 ALDGQ 115
+DGQ
Sbjct: 359 GVDGQ 363
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 30 ISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETG 89
I+ S+ NP++ + KLF+GG+ +D +L + F+++G + EA +++D+ TG
Sbjct: 150 INNSSNTLNPNV-------TERKLFIGGLPSLVDRQTLWKYFSQFGQLEEAVVMMDKLTG 202
Query: 90 RSRGFGFVTFSTVEEASSAIQALDGQVTFNAS 121
RSRGFGF+TF V++ S + + V + +
Sbjct: 203 RSRGFGFITFVNVKDLESCLSYPNSHVLLDKT 234
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY + + L+ AFA+YG VN ++ DRETGR RGF FV T + ++AI+AL
Sbjct: 3 IYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIT 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLF+GG++++ D +L E F+++G + EA ++ DR+T RSRGFGFV F+T EA A+Q
Sbjct: 2 AKLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQ 61
Query: 111 ALD 113
++
Sbjct: 62 RMN 64
>gi|226467816|emb|CAX69784.1| RNA-binding protein 38 [Schistosoma japonicum]
Length = 112
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K+FVGG+ Y+ D SLR F ++G ++EA +I DR+TG+SRG+GFVT S E+A AI+
Sbjct: 12 TKIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGYGFVTMSRTEDALLAIR 71
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 52/66 (78%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++K++VG +++ +D+++L F++ G V +A++I DR++GRSRGFGFVT+ + +E ++A
Sbjct: 182 SANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNA 241
Query: 109 IQALDG 114
I LDG
Sbjct: 242 ISNLDG 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
KLFVG + +++D L F + G V ++ DR TGRSRGFGFVT S+
Sbjct: 80 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSS 129
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Query: 39 PSIYQAIRCMSSS-----KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRG 93
PSI + I+ ++S+ KLFV G+++N +LR AF ++G + E +I D+ TG+SRG
Sbjct: 49 PSIAEEIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRG 108
Query: 94 FGFVTFSTVEEASSAIQA----LDGQVTF-NASC 122
+GF+TF +E A++A +DG++ N +C
Sbjct: 109 YGFITFKNMESTQQALRAPSKLIDGRLAVCNLAC 142
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
+S KL++G +S + L FA++G + E + DR+T SRGFGFVT+ T E A
Sbjct: 154 LSLRKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKK 213
Query: 108 AIQALD 113
AI ++
Sbjct: 214 AIDDVE 219
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G IS++ D+N ++E F+KYG + R+ D E+GR +GFG+V FS+V+EA +A+
Sbjct: 343 SDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAL 402
Query: 110 QALDG 114
+A G
Sbjct: 403 EAEHG 407
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKY--GYVNEARIILDRETGRSRGFGFVTFSTVEEAS 106
+S+ LFVG +S+N+D+ LR F ++ ++N + T R FG+V F VE+A
Sbjct: 235 ASANLFVGNLSWNVDEEWLRSEFEEFEGEHINFLLNVKSLLTKLIR-FGYVEFVNVEDAV 293
Query: 107 SAIQA-----LDGQ 115
A A LDG+
Sbjct: 294 KAHTAKKDAELDGR 307
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 73
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 74 RPYKVDGRV 82
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + ++ DR
Sbjct: 80 GRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDR 139
Query: 87 ETGRSRGFGFVTFS 100
++G+ RGF FVTF
Sbjct: 140 QSGKKRGFAFVTFD 153
>gi|168021263|ref|XP_001763161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685644|gb|EDQ72038.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 39 PSIYQAIRCMSSS-----KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRG 93
P++ IR ++S KLFV G+++ +LREAF +YG V EA +I D+ TG+SRG
Sbjct: 36 PAVADDIRDIASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRG 95
Query: 94 FGFVTFSTVEEASSAIQA----LDGQVT 117
FGF+TF ++ A A++ +DG++T
Sbjct: 96 FGFITFKHMDSAHRALKEPSKNIDGRIT 123
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
KL++GG+SY+ ++L F++YG + E I D+ T +SRGF FVTF ++E A AI+
Sbjct: 145 KLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGFAFVTFKSIEGAKRAIE 203
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 152
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 51/73 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L+++F ++G V A+++++R+TGRS+GFGFV ++ EA +AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSIV 75
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
S P + + + KLFVG +S+++ + L +AF +YG V AR++ D ETGRSRG+GF
Sbjct: 30 SKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGF 89
Query: 97 VTFSTVEEASSAIQALD 113
V +ST E +A+ AL+
Sbjct: 90 VCYSTQAEMEAAVAALN 106
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%)
Query: 46 RCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEA 105
+ ++ LFV G+S L+EAF+K+G V +AR++ DR +G S+GFGFV ++T+E+A
Sbjct: 50 QAEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDA 109
Query: 106 SSAIQALDGQ 115
+ I+ +DGQ
Sbjct: 110 AEGIKGMDGQ 119
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+KL+VG + + +N L++ FA++G V +I+D+ +GR RGFGFVT T E A +A+
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 110 QALDG 114
QAL+G
Sbjct: 62 QALNG 66
>gi|432112552|gb|ELK35268.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D SLR F ++G + + ++ D T RSRGFGFVT++TVEE +A+ A
Sbjct: 74 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 133
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 134 RPHKVDGRV 142
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ ++ +L AFA +G V ++++I DRETGRSRGFGFVTFS+ + AI+
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V A ++ DRE+GRSRGFGFV+ ++ EE AI A
Sbjct: 48 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 107
Query: 112 LDGQ 115
LDGQ
Sbjct: 108 LDGQ 111
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L+VG +S+ +DD +L F + G V EAR+I DR++GRS+GFGFVT S+ +E AI
Sbjct: 278 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 337
Query: 111 ALDG 114
+L+G
Sbjct: 338 SLNG 341
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLFVG +S+N+D L + F G V +I D+ TGRSRGFGFVT ST E +A Q
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 112 LDGQVT 117
+G V+
Sbjct: 160 FNGYVS 165
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +S+N+ D L+ FA YG V A+I+ D+ T RS+GFGFV +T EEA +AI+AL
Sbjct: 3 IYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEAL 62
Query: 113 DG 114
+G
Sbjct: 63 NG 64
>gi|120613407|ref|YP_973085.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591871|gb|ABM35311.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 123
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D+ L++ F++YG V A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDDDLQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
GQ
Sbjct: 63 GAHGQ 67
>gi|168702843|ref|ZP_02735120.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 94
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ LFVG +S+ + LREAFA+YG V + +++ DRETGR RGFGFV S+ E AI
Sbjct: 2 AKNLFVGNMSFATGEEQLREAFAQYGTVTKVQVVTDRETGRPRGFGFVEMSSGGE--QAI 59
Query: 110 QALDG 114
QAL+G
Sbjct: 60 QALNG 64
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ D +L EAF+++G + +++II DRETGRSRGFGFVTF + AI+
Sbjct: 7 RCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 112 LDGQ 115
++GQ
Sbjct: 67 MNGQ 70
>gi|238484659|ref|XP_002373568.1| glycine-rich RNA-binding protein, putative [Aspergillus flavus
NRRL3357]
gi|220701618|gb|EED57956.1| glycine-rich RNA-binding protein, putative [Aspergillus flavus
NRRL3357]
Length = 127
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D SLR F KYG V EA ++ DR+TGRSRGFGFV FS+ +A +A
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAH 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 EMNNQ 66
>gi|169767750|ref|XP_001818346.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|83766201|dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 127
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ D SLR F KYG V EA ++ DR+TGRSRGFGFV FS+ +A +A
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAH 61
Query: 111 ALDGQ 115
++ Q
Sbjct: 62 EMNNQ 66
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++ G +S+ MD L++ ++G V +AR+I DRET RSRGFGFVT STV EA +
Sbjct: 120 KVYFGNLSWGMDHLDLQDLCGEFGTVEDARLITDRETNRSRGFGFVTMSTVAEAEEVVNQ 179
Query: 112 LDGQ 115
L+GQ
Sbjct: 180 LNGQ 183
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG +S+ + ++SL + F +YG ++ ++ D TGRSRGFGFVT A + I A
Sbjct: 18 KLYVGNLSWGVTNDSLADVFNQYG-ASDVTVVTDMNTGRSRGFGFVTVPDQAVADACIAA 76
Query: 112 LDG 114
LDG
Sbjct: 77 LDG 79
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L+VG +S+ +DD +L F + G V EAR+I DR++GRS+GFGFVT S+ +E AI
Sbjct: 254 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 313
Query: 111 ALDG 114
+L+G
Sbjct: 314 SLNG 317
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
KLFVG +S+N+D L + F G V +I D+ TGRSRGFGFVT ST
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 149
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++ LFV G+S LREAFAK+G V AR++ DR +G S+GFGFV ++T+E+A+ I
Sbjct: 35 NTNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGI 94
Query: 110 QALDGQ 115
+ +DG+
Sbjct: 95 KGMDGK 100
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L+VG +S+ +DD +L F + G V EAR+I DR++GRS+GFGFVT S+ +E AI
Sbjct: 241 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 300
Query: 111 ALDG 114
+L+G
Sbjct: 301 SLNG 304
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
KLFVG +S+N+D L + F G V +I D+ TGRSRGFGFVT ST
Sbjct: 92 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 141
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LF+G I+++ ++N + EAFA++G + R+ D E+GR +GFG+V FS+V+EA SA
Sbjct: 332 SDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAF 391
Query: 110 QALDG 114
QAL+G
Sbjct: 392 QALNG 396
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
LF+G +S+N+D+ LR F ++G + RI+ DR++GRSRGFG+V F+
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFT 278
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF+++G V A+++++R+TGRS+GFGFV + EA AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L+VG +S+ +DD +L F + G V EAR+I DR++GRS+GFGFVT S+ +E AI
Sbjct: 257 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 316
Query: 111 ALDG 114
+L+G
Sbjct: 317 SLNG 320
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
KLFVG +S+N+D L + F G V +I D+ TGRSRGFGFVT ST
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 149
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
++L+VG +S+ +DD +L F + G V EAR+I DR++GRS+GFGFVT S+ +E AI
Sbjct: 249 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 308
Query: 111 ALDG 114
+L+G
Sbjct: 309 SLNG 312
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
KLFVG +S+N+D L + F G V +I D+ TGRSRGFGFVT ST
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 149
>gi|380491369|emb|CCF35369.1| cold response protein 2 [Colletotrichum higginsianum]
Length = 92
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
SKLF+GG++++ ++ +LR+ F ++G V EA ++ DR+TGRSRGFGFV ++ +A AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIA 61
Query: 111 ALD 113
A++
Sbjct: 62 AMN 64
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S+ D +L +AF+ YG V EA+++LDR+T RSRGFGFVTF AI
Sbjct: 3 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 62
Query: 112 LDGQ 115
+ G+
Sbjct: 63 MHGK 66
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L+++F ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|319765041|ref|YP_004128978.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827233|ref|YP_004390536.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119602|gb|ADV02091.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312605|gb|AEB87020.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 116
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L + F++YG V A+++++R+TGRS+GFGFV + EA +AIQ
Sbjct: 3 NKLYVGNLPYSFRDQDLEQTFSQYGSVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQ 62
Query: 111 ALDGQ 115
GQ
Sbjct: 63 GAHGQ 67
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
Length = 122
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S KL+VG +S+ LRE F++ G V A ++ DRE+GRSRGFGFV ST EE AI
Sbjct: 2 SMKLYVGNLSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAI 61
Query: 110 QALDGQVTFNA 120
L+G+ FN
Sbjct: 62 AELNGK-DFNG 71
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F ++G + + ++ D +T RSRGFGFVT+S VEE +++ A
Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 88 RPHKVDGRV 96
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ LR+ F YG + ++ DR++G+ RGF FVTF
Sbjct: 115 LTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTF 166
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ ++ SL AF KYG + + +I DRET +SRGFGFV + E+A A+
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDG 65
Query: 112 LDGQV 116
++GQ
Sbjct: 66 MNGQT 70
>gi|414590675|tpg|DAA41246.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 132
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST---VEEA 105
S KLFVGGIS+ D++ LRE F ++G V EA I+ DR TGR+RGFGFV F+ E
Sbjct: 4 DSGKLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERV 63
Query: 106 SSAIQALDGQVTF 118
+ +DG++
Sbjct: 64 TMEKHMIDGRMVL 76
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG+S++ D SL AF YG + EA+++ DRET RSRGFGFVTF E +AI+
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 112 LDGQ 115
+ Q
Sbjct: 66 MHNQ 69
>gi|414079549|ref|YP_007000973.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
gi|413972828|gb|AFW96916.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
Length = 99
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY + + L+ FA+YG V +A++ +DRETGR RGFGFV S+ E +AI AL
Sbjct: 3 IYVGNLSYQVAEEDLKRVFAEYGTVKKAQLPIDRETGRVRGFGFVEMSSDAEEQAAIAAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ + L E FA+YG V ++ DRETGR RGFGFV S+ E AI+AL
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 26 AGKRISCESSISNPSIYQAIRCMSSSK-----LFVGGISYNMDDNSLREAFAKYGYVNEA 80
A KR + + P + ++ +SS++ LFVG +S+N+D+ LR F ++G +
Sbjct: 275 AKKRKAATEAEPTP---KKVKTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAV 331
Query: 81 RIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
R++ DRE+GRS+GFG+V ++T E A A++ + G+
Sbjct: 332 RVVTDRESGRSKGFGYVEYTTNEAAKKALEEMKGK 366
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 41 IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
+Y + S +FV +S+ D+ ++ F +G + RI D E+G+ +GF ++ +
Sbjct: 392 LYGDQKSPESETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYD 451
Query: 101 TVEEASSAIQALDG 114
V+ A A++ ++G
Sbjct: 452 RVDSARKAVEEMNG 465
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 35 SISNPSIYQAIRCMSSS--------KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
SI S++ A+ S S KLF+GG+S+ D SLR F ++G + + ++ D
Sbjct: 115 SIVKVSLHPAVMSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDP 174
Query: 87 ETGRSRGFGFVTFSTVEEASSAIQA----LDGQV 116
T RSRGFGFVT++TVEE +A+ A +DG+V
Sbjct: 175 NTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV 208
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + +++ LR+ F +YG + I+ DR
Sbjct: 206 GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 265
Query: 87 ETGRSRGFGFVTF 99
+G+ RGF FVTF
Sbjct: 266 GSGKKRGFAFVTF 278
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG + +++D+ L + F+++G V AR++ DRET RSRGFGFVT S E A+ AL
Sbjct: 222 IYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEMKDAVAAL 281
Query: 113 DGQ 115
DGQ
Sbjct: 282 DGQ 284
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KLFVG + Y++D L F + G V A +I +RET +SRGFGFVT STVEEA +A++
Sbjct: 124 AKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAENAVE 183
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG+S++ D L+EAF K+G++ EA++++D+ +GRSRGFGFVTF + AI+A
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKA 67
Query: 112 LDG 114
++G
Sbjct: 68 MNG 70
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG ++++ ++ +RE F YG V E +II+DR +GRSRGF FV +T +EA A
Sbjct: 5 NQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGKAK 64
Query: 110 QALDGQVTFNASCV 123
AL GQ S V
Sbjct: 65 DALSGQPFQGKSLV 78
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L+++F ++G V A+++++R+TGRS+GFGFV + EA +AI
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 111 ALDGQVTFNASCV 123
++GQ S V
Sbjct: 63 GMNGQPLGGRSVV 75
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF+++G V A+++++R+TGRS+GFGFV + EA AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG++++ +++LRE F KYG V + +I+ D TGRSRGFGF++F S+V+E
Sbjct: 161 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 220
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 221 KTQHILDGKV 230
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TG+SRGFGFVT+ + +
Sbjct: 245 TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 304
Query: 110 Q 110
Q
Sbjct: 305 Q 305
>gi|53714011|ref|YP_100003.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|60682207|ref|YP_212351.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|265764361|ref|ZP_06092929.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410386|ref|ZP_08590866.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|375359004|ref|YP_005111776.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|423250510|ref|ZP_17231526.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|423256011|ref|ZP_17236940.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|423271876|ref|ZP_17250846.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|423276340|ref|ZP_17255281.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|423283895|ref|ZP_17262779.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
gi|52216876|dbj|BAD49469.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
gi|60493641|emb|CAH08430.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|263256969|gb|EEZ28315.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163685|emb|CBW23239.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|335945442|gb|EGN07255.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|392650093|gb|EIY43765.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|392652819|gb|EIY46477.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|392696732|gb|EIY89924.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|392697381|gb|EIY90566.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|404580441|gb|EKA85150.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
Length = 122
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ GISYN+ + L E F ++G V A+I++DRETGRS+GFGFV EE ++AI AL
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 113 D 113
+
Sbjct: 63 N 63
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|388497682|gb|AFK36907.1| unknown [Lotus japonicus]
Length = 229
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 12 MAFFSKVGNILRQTAGKRI-SCESS---ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSL 67
MA F ++GN+L+ ++I S E ++ SI +A +S LFVGGIS D L
Sbjct: 1 MALFGRLGNLLKHAVNRQIISSEIRSRFLATRSINKAASA-PTSMLFVGGISPTTTDRHL 59
Query: 68 REAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQV 116
+AF+ +G V A + + G+ R FG V F+TVE A+ A+QAL+GQV
Sbjct: 60 DDAFSIHGDVYLATVKHTKVDGKPRQFGLVAFTTVECATRALQALNGQV 108
>gi|336464677|gb|EGO52917.1| hypothetical protein NEUTE1DRAFT_27845, partial [Neurospora
tetrasperma FGSC 2508]
Length = 102
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 57 GISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQ 115
G+S+N DDN LR F ++G V EA ++ DR+TGRSRGFGFV + +A +AI +DGQ
Sbjct: 1 GLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQ 59
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEASSA 108
K+F+GG+++ + +LR+ F KYG+V + +I+ D TGRSRGFGF+TF S+V+E
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 109 IQALDGQV 116
LDG+V
Sbjct: 155 QHILDGKV 162
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F++YG + +A+++LD++TGRSRGFGFVT+ + +
Sbjct: 177 TGKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVC 236
Query: 110 QA 111
Q+
Sbjct: 237 QS 238
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
S ++ RC F+GG+S++ D SL+EAF K+G++ EA++++D+ +GRSRGFGFV+F
Sbjct: 2 SEHEEYRC------FIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSF 55
Query: 100 STVEEASSAIQALDG 114
+ AI+ + G
Sbjct: 56 DDKQAMEDAIKEMHG 70
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S+ LFVG IS++ + + E F +YG +N R+ DRETG +GFG+V FS++EEA SA+
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 110 QALDG 114
+ L G
Sbjct: 420 ENLTG 424
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 46/66 (69%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
++ LFVG +S+N+D+ L F ++G + R+I DR++GRS+G+G+V F + ++A+ A
Sbjct: 251 ATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKA 310
Query: 109 IQALDG 114
++A G
Sbjct: 311 LEARHG 316
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG+S++ D SL AF YG + EA+++ DRET RSRGFGFVTF E +AI+
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 112 LDGQ 115
+ Q
Sbjct: 66 MHNQ 69
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S+N D L E F ++G V EA++I+D+ETG SRGFGFV F AI+
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIER 67
Query: 112 LDGQ 115
L G+
Sbjct: 68 LHGK 71
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 27 GKRISCESSISNPSIYQAIRCM--SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIIL 84
G+ + S P + R +++++VG +S+ +D+ +L F+ G V EA++I
Sbjct: 154 GRSLRVNSGPPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIY 213
Query: 85 DRETGRSRGFGFVTFSTVEEASSAIQALDG 114
DRE+GRSRGFGFVT+ + EE +A+ LDG
Sbjct: 214 DRESGRSRGFGFVTYGSAEEVENAVSNLDG 243
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+VEE +A++
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 112 LDGQV 116
+G +
Sbjct: 147 FNGYI 151
>gi|121607152|ref|YP_994959.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551792|gb|ABM55941.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 122
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y+ D L++ F++YG V A+++++R+TGRS+GFGFV + +A +AIQ
Sbjct: 3 NKLYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAQAQAAIQ 62
Query: 111 ALDGQ 115
+ GQ
Sbjct: 63 GVHGQ 67
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+++ + SL AFA YG + ++++I DRETGRSRGFGFVTFS+ AI+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 112 LDGQ 115
++G+
Sbjct: 69 MNGK 72
>gi|339247123|ref|XP_003375195.1| RNA-binding protein 24 [Trichinella spiralis]
gi|316971505|gb|EFV55264.1| RNA-binding protein 24 [Trichinella spiralis]
Length = 402
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 26 AGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILD 85
A +S +++ +P + A + + +K+FVGG+ Y+ +D +LRE F +YG + EA +I D
Sbjct: 58 AADPLSAMAALMDPLL--ANKDTTFTKIFVGGLPYHTNDRTLREHFEQYGEIEEAVVITD 115
Query: 86 RETGRSRGFGFVTFSTVEEASSAIQ 110
R+TG+SRG+GFVT A A +
Sbjct: 116 RQTGKSRGYGFVTMKDRPSAERACK 140
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ +VG + + +DD+ L + F+++G V A ++ DRE+GRSRGFGFV+ ++ EE AI A
Sbjct: 111 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 170
Query: 112 LDGQ 115
LDGQ
Sbjct: 171 LDGQ 174
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+K++VG + Y++D L + F + G V A +I +RETG+SRGFGFVT ST+EEA AI+
Sbjct: 16 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIE 75
Query: 111 ALD 113
L+
Sbjct: 76 MLN 78
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+++++VG +S+ +D+ +L F+ G V EA++I DRE+GRSRGFGFVT+ + EE +A+
Sbjct: 179 ANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAV 238
Query: 110 QALDG 114
LDG
Sbjct: 239 SNLDG 243
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
++FVG + +++D L F + G V +I D+ TGRSRGFGFVT S+VEE +A++
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 112 LDGQV 116
+G +
Sbjct: 147 FNGYI 151
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 37 SNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGF 96
S P + + + KLFVG +S+++ + L +AF +YG V AR++ D ETGRSRG+GF
Sbjct: 187 SKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGF 246
Query: 97 VTFSTVEEASSAIQALD 113
V +ST E +A+ AL+
Sbjct: 247 VCYSTQAEMEAAVAALN 263
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
S++KL+ G + Y++D L YG ++ DR++G+SRGF FVT S +E+ ++
Sbjct: 108 SATKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAV 167
Query: 109 IQALDGQ 115
I+ LDG+
Sbjct: 168 IENLDGK 174
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GGIS++ DD L+E F KYG V EA I+ DR TGR+RGFGFV F+ A I
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 110 -QALDGQV 116
+DG+
Sbjct: 67 KHIIDGRT 74
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 40 SIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
SI+ + + K+FVGG+ + ++ ++ F ++G + + ++ D T R RGFGF+T+
Sbjct: 95 SIHGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITY 154
Query: 100 STVEEA 105
+ EEA
Sbjct: 155 DS-EEA 159
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY + ++ L++AFA+YG V+ ++ DRETGR RGF FV T ++ ++AI+AL
Sbjct: 3 IYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG +S ++D L +AF+ +G V+EAR++ D +TGRSRG+GFV F EA A+ ++
Sbjct: 185 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 244
Query: 113 DGQ 115
DG+
Sbjct: 245 DGE 247
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L++GG+ + + LR+ F G+V +II D+ R +GFV + A A+Q L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDK-NARGYNYGFVEYDDPGAAERAMQTL 142
Query: 113 DGQ 115
+G+
Sbjct: 143 NGR 145
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG +S ++D L +AF+ +G V+EAR++ D +TGRSRG+GFV F EA A+ ++
Sbjct: 174 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 233
Query: 113 DGQ 115
DG+
Sbjct: 234 DGE 236
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L++GG+ + + LR+ F G+V +II D+ R +GFV + A A+Q L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDK-NARGYNYGFVEYDDPGAAERAMQTL 142
Query: 113 DGQ 115
+G+
Sbjct: 143 NGR 145
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A
Sbjct: 150 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 209
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 210 RPHKVDGRV 218
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ +LR+ F KYG + ++ DR++G+ RGF FVTF
Sbjct: 237 LTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTF 288
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
Q +RC S+ ++FV +S+ + ++ F+ +G V EAR++ D +TGR +GFGFV +S+
Sbjct: 14 QVLRCFST-EIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQ 72
Query: 103 EEASSAIQALDGQV 116
EA A++A+DG++
Sbjct: 73 AEAEKAVKAMDGKI 86
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ M D SLR F ++G + + ++ D T RSRGFGFVT++TVEE +A+ A
Sbjct: 15 KLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 75 RPHKVDGRV 83
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFS 100
++ K+FVGGI + +++ LR+ F +YG + I+ DR +G+ RGF FVTF
Sbjct: 102 LTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFD 154
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 54 FVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALD 113
FVGG+++ D +L +AF+ YG V +++II DRETGRSRGFGFVTF + AI ++
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISGMN 69
Query: 114 GQ 115
GQ
Sbjct: 70 GQ 71
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+FVG +S ++D+ L +AF+ +G V+EAR++ D +TGRSRG+GFV F EA A+ ++
Sbjct: 160 IFVGDLSNEVNDDILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 219
Query: 113 DGQ 115
DG+
Sbjct: 220 DGE 222
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
L+VGG+ + ++ LR+ F G+V +II D+ + +GFV + A A+Q L
Sbjct: 70 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGFNYGFVEYDDPGAADRAMQTL 128
Query: 113 DGQ 115
+G+
Sbjct: 129 NGR 131
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+ ++VG ++ N + F +G+V E+R DR GF F+ T E AS AI
Sbjct: 284 TTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADR------GFAFIKMDTHENASMAIC 337
Query: 111 ALDG 114
++G
Sbjct: 338 QMNG 341
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ F+GG++++ D LR+AF KYG++ EA+++LD+ +GRSRGFGF+TF + AI A
Sbjct: 8 RCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 112 LDG 114
++G
Sbjct: 68 MNG 70
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
++KLFVG +++ D+SL+ F++ G V+ AR+I DR TGRS+GFGFV S+ EEA A+
Sbjct: 2 ATKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAV 61
Query: 110 QALDGQ 115
L+G+
Sbjct: 62 AELNGK 67
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 42 YQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFST 101
Y R S+ LF+G +S+ + S++E FA+YG + + DR+TG +GFG+V FS+
Sbjct: 310 YGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSS 369
Query: 102 VEEASSAIQALDGQ 115
+EA++A++AL+GQ
Sbjct: 370 QQEATAALEALNGQ 383
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 30 ISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETG 89
I +S + P+ + I+ LFVG +S+N+D++ LR F +G + R+I DRETG
Sbjct: 201 IVKKSKVEEPAAEEGIK-----NLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETG 255
Query: 90 RSRGFGFVTFSTVEEASSAIQAL 112
R++GFG+V FS +A+ A + +
Sbjct: 256 RAKGFGYVEFSNAADAAKAQKEM 278
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KL+VG IS++M L F YG V +A + +RETGR RGF FVTFS+ EA +AI
Sbjct: 3 KLYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIAD 62
Query: 112 LDGQ 115
LDG+
Sbjct: 63 LDGK 66
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 49/66 (74%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S +FVG +S ++D +L++AF K+G + +A ++ D +T RSRG+GFVTF E+A +A+
Sbjct: 192 SYNIFVGDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENAL 251
Query: 110 QALDGQ 115
Q+++G+
Sbjct: 252 QSMNGE 257
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ + L AFA+YG V + I DRETGRSRGFGFV S+ +E AI AL
Sbjct: 3 IYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIDAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D+SLRE F ++G + + ++ D +T RSRGFGFVT+S VEE +++ A
Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 88 RPHKVDGRV 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF 99
++ K+FVGGI + ++ LR+ YG + ++ DR++G+ RGF FVTF
Sbjct: 115 LTVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTF 166
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
KLF+GG+S+ D SLR F ++G + + ++ D T RSRGFGFVT+STVEE +A+ A
Sbjct: 28 KLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNA 87
Query: 112 ----LDGQV 116
+DG+V
Sbjct: 88 RPHKVDGRV 96
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 27 GKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDR 86
G+ + + ++S + ++ K+FVGGI + +++ LR+ F +YG + I+ DR
Sbjct: 94 GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDR 153
Query: 87 ETGRSRGFGFVTFS 100
+G+ RGF FVTF
Sbjct: 154 GSGKKRGFAFVTFD 167
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEAS 106
S K+F+GG+++ ++ LR+ F+KYG V E +I+ D TGRSRGFGF+TF S+V+E
Sbjct: 121 SCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVV 180
Query: 107 SAIQALDGQV 116
LDG+V
Sbjct: 181 KTQHILDGKV 190
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E FA++G + +A+++LD++TGRSRGFGF+T+ T +
Sbjct: 205 TGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVC 264
Query: 110 Q 110
Q
Sbjct: 265 Q 265
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
++VG +SY++ + L AFA+YG V + I DRETGRSRGFGFV S+ +E AI AL
Sbjct: 3 IYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAINAL 62
Query: 113 DG 114
DG
Sbjct: 63 DG 64
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
R A R +S N + R S LF+G I+++ D+N + E FA+YG + R+
Sbjct: 326 RSNAAPRDRAQSRAQN---FGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRL 382
Query: 83 ILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
D E+GR +GFG+V FS+++EA SA ++L+G
Sbjct: 383 PTDPESGRPKGFGYVQFSSIDEARSAFESLNG 414
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA- 111
LF+G +S+N+D+ LR F ++G + RI+ DR++GRS+GFG+V F+ E+A A A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 112 ----LDGQ 115
LDG+
Sbjct: 309 KDTELDGR 316
>gi|390334887|ref|XP_003724037.1| PREDICTED: RNA-binding protein 38-like [Strongylocentrotus
purpuratus]
Length = 129
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 43 QAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTV 102
Q + + +K+FVGG+ Y+ D SLR+ F YG + EA +I DR +G+S+G+GFVT S
Sbjct: 2 QGQKDTTFTKIFVGGLPYHTTDKSLRDHFEIYGTIEEAVVITDRTSGKSKGYGFVTMSDQ 61
Query: 103 EEASSAIQ 110
EA +A +
Sbjct: 62 REAETATK 69
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
R A R +S N + R S LF+G I+++ D+N + E FA+YG + R+
Sbjct: 326 RSNAAPRDRAQSRAQN---FGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRL 382
Query: 83 ILDRETGRSRGFGFVTFSTVEEASSAIQALDG 114
D E+GR +GFG+V FS+++EA SA ++L+G
Sbjct: 383 PTDPESGRPKGFGYVQFSSIDEARSAFESLNG 414
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA- 111
LF+G +S+N+D+ LR F ++G + RI+ DR+TGRS+GFG+V F+ E+A A A
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 112 ----LDGQ 115
LDG+
Sbjct: 309 KDTELDGR 316
>gi|383118922|ref|ZP_09939662.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
gi|251944121|gb|EES84630.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
Length = 122
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ GISYN+ + L E F ++G V A+I++DRETGRS+GFGFV EE ++AI AL
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+LFVG + Y L + F++ G V++A+II D+ T RSRGF FVT +T EEA+ AIQ
Sbjct: 113 RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 172
Query: 112 LDGQVT 117
DG V+
Sbjct: 173 FDGAVS 178
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
K++ G + + + ++LR F + +AR+I +RETGRSRGFGFV+FST E+A +A+++
Sbjct: 256 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALES 315
Query: 112 LDG 114
LDG
Sbjct: 316 LDG 318
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTF---STVEEASS 107
+K+F+GG+++ +++LRE F+KYG V E +I+ D TGRSRGFGF++F S+V+E
Sbjct: 171 NKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVVK 230
Query: 108 AIQALDGQV 116
LDG+V
Sbjct: 231 TQHILDGKV 239
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ K+FVGGI ++ E F+++G + +A+++LD++TGRSRGFGF+T+ + +
Sbjct: 254 TGKIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVC 313
Query: 110 Q 110
Q
Sbjct: 314 Q 314
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+ FVGG+S+ D +L +AF+ YG V EA+++LDR+T RSRGFGFVTF AI
Sbjct: 9 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 68
Query: 112 LDGQ 115
+ G+
Sbjct: 69 MHGK 72
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI-- 109
KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGF T+S VEE +A+
Sbjct: 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEVDAAMCA 73
Query: 110 --QALDGQV 116
+DG+V
Sbjct: 74 RPHKVDGRV 82
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 23 RQTAGKRISCESSISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARI 82
+ G+ + + ++S + ++ K+FVGGI + ++ +LR+ F KYG + +
Sbjct: 76 HKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 135
Query: 83 ILDRETGRSRGFGFVTFS 100
+ DR++G+ RGF FVTF
Sbjct: 136 MEDRQSGKKRGFAFVTFD 153
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Query: 39 PSIYQAIRCMSSS-----KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRG 93
PSI + I+ ++S+ KLFV G+++N +LR AF ++G + E +I D+ TG+SRG
Sbjct: 50 PSIAEEIKSIASADPAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRG 109
Query: 94 FGFVTFSTVEEASSAIQA----LDGQVTF-NASC 122
+GF+TF +E A++A +DG++ N +C
Sbjct: 110 YGFITFKNMESTQQALRAPSKLIDGRLAVCNLAC 143
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 48 MSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASS 107
+S KL++G +S + L FA++G + E + DR+T SRGFGFVT+ T E A
Sbjct: 155 LSLRKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKK 214
Query: 108 AIQALD 113
AI L+
Sbjct: 215 AIDDLE 220
>gi|423256816|ref|ZP_17237739.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|423266219|ref|ZP_17245222.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
gi|387778292|gb|EIK40387.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|392701574|gb|EIY94732.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
Length = 118
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 53 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQAL 112
+F+ GISYN+ + L E F ++G V A+I++DRETGRS+GFGFV EE ++AI AL
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 113 D 113
+
Sbjct: 63 N 63
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 49 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSA 108
+ S LF G +S+ +DDN+L EAF + + AR++ D+ TGRSRGFG+V F+ E A+ A
Sbjct: 179 APSTLFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKA 238
Query: 109 IQALDGQ 115
+A+ GQ
Sbjct: 239 YEAMQGQ 245
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 44/65 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
S LFVG + ++ + +++RE F + V R+ D E+G +GFG+VTF+++++A +A+
Sbjct: 285 SETLFVGNLPFDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFNSIDDAKTAL 344
Query: 110 QALDG 114
+A +G
Sbjct: 345 EAKNG 349
>gi|302338833|ref|YP_003804039.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301636018|gb|ADK81445.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 93
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 50 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAI 109
+ KL+VG +SY+ + L + F +YG V A+I+LDRET RSRGFGFV + A +AI
Sbjct: 2 AKKLYVGNLSYSSTEPGLEDLFGQYGQVVSAKIVLDRETKRSRGFGFVEMEQDDAAEAAI 61
Query: 110 QALDG 114
ALDG
Sbjct: 62 SALDG 66
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 51 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQ 110
+KL+VG + Y++ D L +AF ++G V A+++++R+TGRS+GFGFV + +A +AI
Sbjct: 3 NKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAIN 62
Query: 111 ALDGQ 115
++GQ
Sbjct: 63 GMNGQ 67
>gi|261880310|ref|ZP_06006737.1| RNA-binding protein [Prevotella bergensis DSM 17361]
gi|270333000|gb|EFA43786.1| RNA-binding protein [Prevotella bergensis DSM 17361]
Length = 112
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 52 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA 111
+FV I+Y + SL FA YG V ARII DRETGRSRGFGFV +EA +AI+A
Sbjct: 2 NIFVSNINYRTQNESLLNLFASYGEVTSARIITDRETGRSRGFGFVEMPNDDEAKAAIEA 61
Query: 112 LDGQ 115
++G+
Sbjct: 62 INGK 65
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,650,977,569
Number of Sequences: 23463169
Number of extensions: 55292403
Number of successful extensions: 183127
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18891
Number of HSP's successfully gapped in prelim test: 5971
Number of HSP's that attempted gapping in prelim test: 144943
Number of HSP's gapped (non-prelim): 38800
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)