Query 043940
Match_columns 123
No_of_seqs 123 out of 1163
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 5.7E-27 1.9E-31 153.1 12.1 87 1-92 13-99 (100)
2 4eld_A MJ16.5-P1, small heat s 99.9 3.8E-27 1.3E-31 166.1 11.5 96 1-104 65-161 (161)
3 1gme_A Heat shock protein 16.9 99.9 7.2E-27 2.5E-31 163.4 10.6 99 1-104 52-150 (151)
4 3l1e_A Alpha-crystallin A chai 99.9 1.2E-25 4E-30 148.9 11.7 93 1-105 11-106 (106)
5 4fei_A Heat shock protein-rela 99.9 8.1E-26 2.8E-30 148.5 9.6 83 1-93 15-97 (102)
6 2wj5_A Heat shock protein beta 99.9 5.8E-25 2E-29 144.3 10.9 88 1-103 10-98 (101)
7 3aab_A Putative uncharacterize 99.9 1.4E-24 4.9E-29 146.8 10.4 85 1-93 33-118 (123)
8 3q9p_A Heat shock protein beta 99.9 3.2E-24 1.1E-28 136.8 11.3 78 1-90 6-84 (85)
9 2y1y_A Alpha-crystallin B chai 99.9 4.9E-24 1.7E-28 137.1 11.1 81 1-93 5-86 (90)
10 2klr_A Alpha-crystallin B chai 99.9 6.2E-24 2.1E-28 151.8 10.9 93 1-107 72-165 (175)
11 2bol_A TSP36, small heat shock 99.9 3.7E-22 1.3E-26 153.8 9.5 80 2-90 233-313 (314)
12 2bol_A TSP36, small heat shock 99.8 1.1E-20 3.6E-25 145.6 11.0 86 3-105 113-199 (314)
13 1rl1_A Suppressor of G2 allele 98.9 5.7E-09 1.9E-13 68.7 7.0 73 1-93 18-90 (114)
14 2xcm_C SGT1-like protein, cyto 98.9 6E-09 2.1E-13 65.9 6.4 73 1-93 11-83 (92)
15 3igf_A ALL4481 protein; two-do 98.1 1E-05 3.5E-10 63.3 7.7 63 3-90 306-369 (374)
16 2k8q_A Protein SHQ1; beta-sand 97.9 2.1E-05 7.2E-10 53.4 5.7 69 1-94 12-85 (134)
17 3eud_A Protein SHQ1; CS domain 97.8 0.00036 1.2E-08 46.0 10.0 69 1-94 26-99 (115)
18 1x5m_A Calcyclin-binding prote 97.6 0.0013 4.4E-08 43.8 10.2 71 2-92 30-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.4 0.0011 3.7E-08 44.8 8.7 85 1-96 29-116 (134)
20 1wgv_A KIAA1068 protein; CS do 97.1 0.005 1.7E-07 40.7 9.0 71 2-92 29-102 (124)
21 3qor_A Nuclear migration prote 97.0 0.0031 1.1E-07 41.6 7.5 68 2-92 26-97 (121)
22 1ejf_A Progesterone receptor P 96.9 0.0058 2E-07 40.5 7.7 70 2-92 13-82 (125)
23 1wfi_A Nuclear distribution ge 96.9 0.0022 7.5E-08 42.8 5.6 68 2-92 17-88 (131)
24 2o30_A Nuclear movement protei 96.7 0.013 4.4E-07 39.1 8.4 66 2-91 14-80 (131)
25 2rh0_A NUDC domain-containing 96.6 0.012 4E-07 40.6 8.2 67 2-92 23-91 (157)
26 2cg9_X CO-chaperone protein SB 96.5 0.0022 7.5E-08 43.2 3.8 73 3-91 24-97 (134)
27 2kmw_A Uncharacterized protein 95.8 0.016 5.4E-07 39.7 5.2 69 2-93 14-83 (150)
28 3q9p_A Heat shock protein beta 87.9 1.3 4.6E-05 26.7 5.3 33 58-91 8-40 (85)
29 3gla_A Low molecular weight he 85.4 3.7 0.00013 25.2 6.5 35 57-92 14-48 (100)
30 2y1y_A Alpha-crystallin B chai 85.3 1.7 5.8E-05 26.5 4.7 33 58-91 7-39 (90)
31 3l1e_A Alpha-crystallin A chai 84.5 2.1 7.2E-05 27.0 5.0 32 58-90 13-44 (106)
32 2wj5_A Heat shock protein beta 83.8 2 7E-05 26.8 4.7 32 59-91 13-44 (101)
33 4fei_A Heat shock protein-rela 83.1 2.5 8.6E-05 26.3 4.9 33 57-90 16-48 (102)
34 4eld_A MJ16.5-P1, small heat s 79.9 8.8 0.0003 25.7 7.1 34 57-91 66-99 (161)
35 3aab_A Putative uncharacterize 79.1 5.6 0.00019 25.5 5.7 35 57-92 34-69 (123)
36 2cql_A OK/SW-CL.103, 60S ribos 74.1 4.6 0.00016 25.5 4.0 21 15-36 20-40 (100)
37 1rl6_A Protein (ribosomal prot 72.0 9.3 0.00032 26.5 5.6 46 15-90 11-56 (177)
38 1nkw_E 50S ribosomal protein L 71.8 11 0.00038 27.0 6.1 21 15-36 39-59 (212)
39 2klr_A Alpha-crystallin B chai 70.5 6.3 0.00022 27.2 4.4 34 57-91 73-106 (175)
40 3j21_F 50S ribosomal protein L 67.1 7.9 0.00027 27.1 4.4 45 15-88 14-58 (184)
41 3v2d_H 50S ribosomal protein L 66.5 14 0.00049 25.6 5.6 44 15-88 12-55 (180)
42 1gme_A Heat shock protein 16.9 66.5 23 0.00079 23.4 6.5 35 57-92 53-88 (151)
43 1vq8_E 50S ribosomal protein L 66.5 10 0.00034 26.4 4.8 47 15-90 9-55 (178)
44 3qqz_A Putative uncharacterize 65.3 36 0.0012 24.6 8.1 70 4-86 13-86 (255)
45 2nwt_A UPF0165 protein AF_2212 63.4 5.3 0.00018 23.7 2.4 17 72-88 3-19 (69)
46 3u5e_H L8, RP24, YL11, 60S rib 61.9 29 0.001 24.3 6.5 21 15-36 13-33 (191)
47 3iz5_F 60S ribosomal protein L 56.7 22 0.00075 24.9 5.1 21 15-36 13-33 (190)
48 4a17_E RPL9, 60S ribosomal pro 55.2 17 0.00059 25.4 4.4 22 14-36 12-33 (188)
49 2zkr_e 60S ribosomal protein L 55.2 21 0.0007 25.1 4.8 26 10-36 8-33 (192)
50 3bbo_I Ribosomal protein L6; l 51.4 6.4 0.00022 28.5 1.7 21 15-36 54-74 (223)
51 2uwa_A Cellulase; glycoside hy 51.3 29 0.00099 25.4 5.3 43 14-68 31-74 (274)
52 2o30_A Nuclear movement protei 48.6 49 0.0017 21.2 5.6 32 57-88 14-45 (131)
53 3oeq_A Frataxin homolog, mitoc 48.4 14 0.00049 24.2 2.8 16 74-89 49-64 (123)
54 1ew4_A CYAY protein; friedreic 45.5 11 0.00039 23.8 2.0 26 74-107 30-55 (106)
55 2hyk_A Beta-1,3-glucanase; fam 44.6 25 0.00084 25.0 3.9 45 20-68 52-99 (245)
56 4awd_A Beta-porphyranase; hydr 43.0 60 0.0021 24.4 6.0 46 20-68 89-145 (324)
57 3r8s_G 50S ribosomal protein L 41.3 15 0.00053 25.4 2.3 43 15-87 11-53 (176)
58 2ks0_A Uncharacterized protein 40.3 17 0.00059 21.4 2.1 24 12-36 17-40 (71)
59 1wgv_A KIAA1068 protein; CS do 35.3 84 0.0029 19.8 5.6 32 57-88 29-61 (124)
60 3o5s_A Beta-glucanase; glycosy 34.7 72 0.0025 22.7 5.1 44 20-67 63-107 (238)
61 2rh0_A NUDC domain-containing 34.5 97 0.0033 20.6 5.5 32 57-88 23-54 (157)
62 2gjh_A Designed protein; oblig 32.6 36 0.0012 18.8 2.5 22 14-36 31-52 (62)
63 3qor_A Nuclear migration prote 31.6 98 0.0034 19.5 5.5 32 57-88 26-59 (121)
64 4atf_A Beta-agarase B; hydrola 31.5 84 0.0029 23.5 5.1 44 20-67 76-121 (308)
65 3t3l_A Frataxin, mitochondrial 31.3 31 0.001 22.7 2.4 17 72-88 40-56 (129)
66 2ayh_A 1,3-1,4-beta-D-glucan 4 31.2 87 0.003 21.5 5.0 44 20-67 39-83 (214)
67 4ate_A Beta-porphyranase A; hy 30.5 1.2E+02 0.0042 21.9 5.8 46 20-66 58-111 (266)
68 1dyp_A Kappa-carrageenase; hyd 28.0 1.6E+02 0.0056 20.9 6.4 16 20-36 48-63 (271)
69 2kgs_A Uncharacterized protein 27.2 39 0.0013 21.9 2.4 26 10-36 2-27 (132)
70 1o4z_A Beta-agarase B; glycosi 26.6 91 0.0031 23.5 4.6 45 20-68 107-153 (346)
71 3juu_A Porphyranase B; glycosi 26.2 1.1E+02 0.0039 22.2 5.0 45 20-68 67-119 (280)
72 1q5l_A Chaperone protein DNAK; 25.7 1.2E+02 0.004 19.5 4.5 31 73-106 99-132 (135)
73 2c3v_A Alpha-amylase G-6; carb 24.8 68 0.0023 20.1 3.1 23 56-81 48-70 (102)
74 1nvp_C Transcription initiatio 24.2 33 0.0011 20.5 1.4 16 71-86 46-61 (76)
75 1wfi_A Nuclear distribution ge 23.3 1.5E+02 0.005 18.8 5.2 32 57-88 17-50 (131)
76 3rq0_A Glycosyl hydrolases fam 23.2 69 0.0024 23.5 3.3 43 19-66 90-134 (269)
77 3i4i_A 1,3-1,4-beta-glucanase; 22.8 1.2E+02 0.0042 21.5 4.5 46 20-67 57-103 (234)
78 3iln_A Laminarinase; jelly ROW 22.6 2.1E+02 0.0071 20.2 6.7 46 20-68 49-97 (251)
79 2vy0_A Endo-beta-1,3-glucanase 22.3 1.5E+02 0.005 21.1 4.9 48 20-68 59-113 (264)
80 1qys_A TOP7; alpha-beta, novel 21.5 86 0.0029 19.0 2.9 22 14-36 75-96 (106)
81 3pet_A Putative adhesin; right 21.5 1.6E+02 0.0055 20.3 4.9 20 71-90 53-72 (221)
82 4asm_B Beta-agarase D; hydrola 21.2 1.2E+02 0.0041 23.4 4.4 17 19-36 83-99 (363)
83 3h0x_A 78 kDa glucose-regulate 21.2 1.8E+02 0.0062 19.0 5.5 35 2-36 62-103 (152)
84 3dob_A Heat shock 70 kDa prote 20.1 1.7E+02 0.006 19.1 4.6 35 2-36 62-103 (152)
85 3azy_A Laminarinase; beta-jell 20.1 2.4E+02 0.0083 20.0 6.8 48 20-68 56-108 (272)
86 3d33_A Domain of unknown funct 20.0 1.7E+02 0.0059 18.3 5.1 27 74-105 31-57 (108)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.95 E-value=5.7e-27 Score=153.14 Aligned_cols=87 Identities=32% Similarity=0.638 Sum_probs=80.2
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. .....+..|+++|+.+|.|.|+|.||.++|.+.|+|+|+|
T Consensus 13 ~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~----~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~~~ 87 (100)
T 3gla_A 13 VNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKS----ESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRN 87 (100)
T ss_dssp SSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECC----GGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEEET
T ss_pred CCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcC----cCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEEeC
Confidence 579999999999999999999999 99999999988 4555677899999999999999999999999999999999
Q ss_pred CEEEEEEecccc
Q 043940 81 GALRIKVPELAE 92 (123)
Q Consensus 81 GvL~I~~PK~~~ 92 (123)
|+|+|++||.+.
T Consensus 88 GvL~I~~pK~~~ 99 (100)
T 3gla_A 88 GVLEIRIPKRPA 99 (100)
T ss_dssp TEEEEEEEBC--
T ss_pred CEEEEEEecCCC
Confidence 999999999864
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=3.8e-27 Score=166.13 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=87.9
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEee-eccEEEEEEEcCCCCCccceeEEEe
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAER-TFGKFWRQFKMPMSADLEHVKAHLE 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~~~f~r~~~LP~~vd~~~i~A~~~ 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. ....++..|+++|+ .+|.|.|+|.||.+||.++|+|+|+
T Consensus 65 ~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~----~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~~ 139 (161)
T 4eld_A 65 DQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSP----LMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFE 139 (161)
T ss_dssp SSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCC----CCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEEE
T ss_pred CCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcc----cccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEEE
Confidence 579999999999999999999999 99999999887 34446678999999 9999999999999999999999999
Q ss_pred CCEEEEEEeccccccCCCCeEEEee
Q 043940 80 NGALRIKVPELAEEKRRQPKVISIN 104 (123)
Q Consensus 80 nGvL~I~~PK~~~~~~~~~~~I~I~ 104 (123)
||+|+|++||.+.. .+|+|+|+
T Consensus 140 nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 140 NGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp TTEEEEEEEBCGGG---SCCCCCCC
T ss_pred CCEEEEEEEcCCCC---CCcEeecC
Confidence 99999999998876 57889885
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=7.2e-27 Score=163.40 Aligned_cols=99 Identities=45% Similarity=0.745 Sum_probs=87.9
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+++|+|.++|||++++||+|++.+++.|+|+|++.. ....++..|+++|+.+|.|.|+|.||.+||.+.|+|+|+|
T Consensus 52 ~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~----~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~n 127 (151)
T 1gme_A 52 PEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTK----EKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLEN 127 (151)
T ss_dssp SSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCC----CCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEET
T ss_pred CCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcc----ccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEEC
Confidence 579999999999999999999964389999999887 4445678999999999999999999999999999999999
Q ss_pred CEEEEEEeccccccCCCCeEEEee
Q 043940 81 GALRIKVPELAEEKRRQPKVISIN 104 (123)
Q Consensus 81 GvL~I~~PK~~~~~~~~~~~I~I~ 104 (123)
|+|+|++||.... .+..++|+|+
T Consensus 128 GvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 128 GVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp TEEEEEEECCCCC-TTCCCCCCCC
T ss_pred CEEEEEEEccCcC-CCCCeEeeeC
Confidence 9999999998865 3446788875
No 4
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.2e-25 Score=148.87 Aligned_cols=93 Identities=18% Similarity=0.451 Sum_probs=79.7
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE-e
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL-E 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~ 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. . ..+..|++++ |.|+|.||.+||.++|+|+| +
T Consensus 11 ~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s~ 78 (106)
T 3l1e_A 11 RDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNE----R--QDDHGYISRE-----FHRRYRLPSNVDQSALSCSLSA 78 (106)
T ss_dssp SSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ETTTEEEEEE-----EEEEEECCTTBCTTSCEEEECT
T ss_pred CCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--cCCCCEEEEE-----EEEEEECCCCcChhHcEEEECC
Confidence 579999999999999999999999 99999999876 2 2234566544 99999999999999999999 8
Q ss_pred CCEEEEEEecccccc--CCCCeEEEeee
Q 043940 80 NGALRIKVPELAEEK--RRQPKVISINE 105 (123)
Q Consensus 80 nGvL~I~~PK~~~~~--~~~~~~I~I~~ 105 (123)
||+|+|++||.++.. ...+|+|+|+.
T Consensus 79 ~GvL~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 79 DGMLTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp TSEEEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred CCEEEEEEEccCcccccCCCCeEeeecC
Confidence 999999999998752 24689999863
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.93 E-value=8.1e-26 Score=148.51 Aligned_cols=83 Identities=27% Similarity=0.399 Sum_probs=77.4
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. +..|+++|+.+|.|.|+|.||.++|.+.|+|+|+|
T Consensus 15 ~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~ 84 (102)
T 4fei_A 15 GTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPEPVRPASGVASLAG 84 (102)
T ss_dssp TTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEET
T ss_pred CCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCCCcchhHcEEEEEC
Confidence 579999999999999999999999 99999999855 25788899999999999999999999999999999
Q ss_pred CEEEEEEeccccc
Q 043940 81 GALRIKVPELAEE 93 (123)
Q Consensus 81 GvL~I~~PK~~~~ 93 (123)
|+|+|++||..+.
T Consensus 85 GvL~I~lpK~~~~ 97 (102)
T 4fei_A 85 GVLTVRFEKLRPT 97 (102)
T ss_dssp TEEEEEEEBSSCC
T ss_pred CEEEEEEEccCcc
Confidence 9999999998764
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=5.8e-25 Score=144.34 Aligned_cols=88 Identities=17% Similarity=0.336 Sum_probs=74.9
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE-e
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL-E 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~ 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. . .++..|++++ |.|+|.||.+||.+.|+|+| +
T Consensus 10 ~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~~s~ 77 (101)
T 2wj5_A 10 PGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEE----R--PDEHGFIARE-----FHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp SSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----C--SSTTCCEEEE-----EEEEEECCTTBCTTCCEEEECT
T ss_pred CCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHCEEEECC
Confidence 578999999999999999999999 99999999987 2 2344566655 99999999999999999999 8
Q ss_pred CCEEEEEEeccccccCCCCeEEEe
Q 043940 80 NGALRIKVPELAEEKRRQPKVISI 103 (123)
Q Consensus 80 nGvL~I~~PK~~~~~~~~~~~I~I 103 (123)
||+|+|++||.... .++.++|
T Consensus 78 nGvL~I~lPK~~~~---~~~~~~i 98 (101)
T 2wj5_A 78 EGVLSIQATPASAQ---ASLPSPP 98 (101)
T ss_dssp TSEEEEEECBCCCC---CSSCC--
T ss_pred CCEEEEEEECCCcC---CCCCCcc
Confidence 99999999998866 4555554
No 7
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=1.4e-24 Score=146.78 Aligned_cols=85 Identities=20% Similarity=0.285 Sum_probs=78.6
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccce-eEEEe
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHV-KAHLE 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i-~A~~~ 79 (123)
+++|+|.++|||++++||+|++.+++.|+|+|++.. .. +..|+++|+++ .|.|+|.||.++|.++| +|+|+
T Consensus 33 ~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~----~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~ 104 (123)
T 3aab_A 33 GGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI----TE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYE 104 (123)
T ss_dssp TTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC----CC---CSCEEEECSCS-EEEEEEECSSEECTTCCCEEEEE
T ss_pred CCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec----cC---CCeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEc
Confidence 579999999999999999999998689999999877 22 67899999999 99999999999999999 99999
Q ss_pred CCEEEEEEeccccc
Q 043940 80 NGALRIKVPELAEE 93 (123)
Q Consensus 80 nGvL~I~~PK~~~~ 93 (123)
||+|+|++||....
T Consensus 105 ~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 105 NGVLTIRIPIAGTS 118 (123)
T ss_dssp TTEEEEEEEGGGEE
T ss_pred CCEEEEEEEcCCCC
Confidence 99999999998764
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.92 E-value=3.2e-24 Score=136.78 Aligned_cols=78 Identities=19% Similarity=0.411 Sum_probs=66.8
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEe-
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLE- 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~- 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. ... +.. ..+++|.|+|.||.+||.++|+|+|.
T Consensus 6 ~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~~--~~~-----~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 6 ADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAA----RQD--EHG-----YISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp CCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred CCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----ccC--CCC-----EEEEEEEEEEECCCCcChHHcEEEECC
Confidence 579999999999999999999999 99999999877 211 112 24678999999999999999999998
Q ss_pred CCEEEEEEecc
Q 043940 80 NGALRIKVPEL 90 (123)
Q Consensus 80 nGvL~I~~PK~ 90 (123)
||+|+|++||.
T Consensus 74 ~GvL~I~lPK~ 84 (85)
T 3q9p_A 74 EGTLTVEAPMP 84 (85)
T ss_dssp TSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999995
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=4.9e-24 Score=137.14 Aligned_cols=81 Identities=19% Similarity=0.431 Sum_probs=69.8
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE-e
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL-E 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~ 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. . ..+..|++++ |.|+|.||.+||.+.|+|+| +
T Consensus 5 ~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~ 72 (90)
T 2y1y_A 5 KDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTITSSMSS 72 (90)
T ss_dssp -CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ECSSSEEEEE-----EEEEEECCTTBCGGGCEEEECT
T ss_pred CCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEEE-----EEEEEECCCCcChhHcEEEECC
Confidence 578999999999999999999999 99999999877 2 2345677654 99999999999999999999 8
Q ss_pred CCEEEEEEeccccc
Q 043940 80 NGALRIKVPELAEE 93 (123)
Q Consensus 80 nGvL~I~~PK~~~~ 93 (123)
||+|+|++||....
T Consensus 73 ~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 73 DGVLTVNGPRKQVS 86 (90)
T ss_dssp TSEEEEEECBC---
T ss_pred CCEEEEEEEcCCCC
Confidence 99999999998765
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=6.2e-24 Score=151.83 Aligned_cols=93 Identities=20% Similarity=0.428 Sum_probs=70.1
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE-e
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL-E 79 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~ 79 (123)
+++|+|.++||||+++||+|++.+ +.|+|+|++.. . .++..|++++ |.|+|.||.+||.++|+|+| +
T Consensus 72 ~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~--~~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~~s~ 139 (175)
T 2klr_A 72 KDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISRE-----FHRKYRIPADVDPLTITSSLSS 139 (175)
T ss_dssp CSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEE----E--EETTEEEEEE-----EEEEEECTTTCCTTTCEEEECT
T ss_pred CCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--ccCCceEEEE-----EEEEEECCCCcChhHeEEEEcC
Confidence 578999999999999999999999 99999999876 2 2345677655 99999999999999999999 7
Q ss_pred CCEEEEEEeccccccCCCCeEEEeeecC
Q 043940 80 NGALRIKVPELAEEKRRQPKVISINEEP 107 (123)
Q Consensus 80 nGvL~I~~PK~~~~~~~~~~~I~I~~~~ 107 (123)
||+|+|++||.+.. ...|+|+|+.++
T Consensus 140 dGvL~I~lPK~~~~--~~~r~I~I~~~~ 165 (175)
T 2klr_A 140 DGVLTVNGPRKQVS--GPERTIPITREE 165 (175)
T ss_dssp TSCEEEEEECC-----------------
T ss_pred CCEEEEEEECCCCC--CCCeEEEEecCC
Confidence 99999999998754 246999998763
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=3.7e-22 Score=153.79 Aligned_cols=80 Identities=16% Similarity=0.335 Sum_probs=66.0
Q ss_pred cEEEEEEEc-CCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 2 TAHVIALDI-PVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 2 d~~~i~~~l-PG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
++|+|.++| |||+++||+|++.+ +.|+|+|+++. +. ..|+++|+++|.|.|+|.||++||.++|+|+|+|
T Consensus 233 ~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~----~~----~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~d 303 (314)
T 2bol_A 233 KKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGK----EE----KTENASHSEHREFYKAFVTPEVVDASKTQAEIVD 303 (314)
T ss_dssp EEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSEECGGGCEEEEET
T ss_pred cEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEec----cC----CceEEEEEeeeEEEEEEECCCCcChHHeEEEEeC
Confidence 589999999 99999999999999 99999999887 21 2578899999999999999999999999999999
Q ss_pred CEEEEEEecc
Q 043940 81 GALRIKVPEL 90 (123)
Q Consensus 81 GvL~I~~PK~ 90 (123)
|+|+|++||.
T Consensus 304 GvL~i~~Pk~ 313 (314)
T 2bol_A 304 GLMVVEAPLF 313 (314)
T ss_dssp TEEEEEEEEE
T ss_pred CEEEEEEecC
Confidence 9999999986
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=1.1e-20 Score=145.65 Aligned_cols=86 Identities=17% Similarity=0.288 Sum_probs=74.5
Q ss_pred EEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEe-CC
Q 043940 3 AHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLE-NG 81 (123)
Q Consensus 3 ~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~-nG 81 (123)
+|+|.++||||+++||+|++.+ +.|+|+|++.. +. ++ ++.+|.|.|+|.||.+||.+.|+|+|+ ||
T Consensus 113 ~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~----~~--e~------~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nG 179 (314)
T 2bol_A 113 HFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSV----AC--GD------AAMSESVGRSIPLPPSVDRNHIQATITTDD 179 (314)
T ss_dssp EEEEEEECTTCCTTTEEEEEET-TEEEEEECCBS----ST--TC------CCBCCCEEEEEECCTTBCGGGCEEEECSSS
T ss_pred EEEEEEECCCCchHHeEEEEEC-CEEEEEEEEec----cC--CC------CEEEEEEEEEEECCCCccccccEEEEeCCC
Confidence 8999999999999999999999 99999999876 21 11 177899999999999999999999999 99
Q ss_pred EEEEEEeccccccCCCCeEEEeee
Q 043940 82 ALRIKVPELAEEKRRQPKVISINE 105 (123)
Q Consensus 82 vL~I~~PK~~~~~~~~~~~I~I~~ 105 (123)
+|+|++||.++. .+.|.|..
T Consensus 180 VL~I~lPK~~~~----~~~I~it~ 199 (314)
T 2bol_A 180 VLVIEAPVNEPN----YKAIKLSP 199 (314)
T ss_dssp EEEEEEEBSSCC----TTTEEEET
T ss_pred EEEEEEeccCcc----cceeeccc
Confidence 999999998765 34465554
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.88 E-value=5.7e-09 Score=68.75 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=62.8
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
++.+.|++.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..++++.+
T Consensus 18 ~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~e~s~~~~~~ 77 (114)
T 1rl1_A 18 ESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------G----------EDYNLKLELLHPIIPEQSTFKVLS 77 (114)
T ss_dssp SSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------S----------SEEEEEECBSSCCCGGGEEEEECS
T ss_pred CCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------C----------cEEEEEeeCCCcCCccccEEEEEC
Confidence 367899999999999999999999 89999976321 1 237788999999999999999999
Q ss_pred CEEEEEEeccccc
Q 043940 81 GALRIKVPELAEE 93 (123)
Q Consensus 81 GvL~I~~PK~~~~ 93 (123)
|.|.|+|+|....
T Consensus 78 ~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 78 TKIEIKLKKPEAV 90 (114)
T ss_dssp SSEEEEEECSSCC
T ss_pred CEEEEEEEcCCCC
Confidence 9999999998654
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.86 E-value=6e-09 Score=65.91 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=62.3
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
++.+.|++.+||+.++++.|.+.+ +.|.|++.... + ..|...+.|+..|+++..++++.+
T Consensus 11 ~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------~----------~~y~~~~~L~~~I~~~~s~~~~~~ 70 (92)
T 2xcm_C 11 PEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------E----------DAYYLQPRLFGKIIPDKCKYEVLS 70 (92)
T ss_dssp TTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------S----------CCEEECCBBSSCBCGGGCEEEECS
T ss_pred CCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------C----------cEEEEeeEcCCccCchhEEEEEEC
Confidence 367889999999999999999999 99999875321 1 237788899999999999999999
Q ss_pred CEEEEEEeccccc
Q 043940 81 GALRIKVPELAEE 93 (123)
Q Consensus 81 GvL~I~~PK~~~~ 93 (123)
|.|.|+|+|....
T Consensus 71 ~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 71 TKIEICLAKADII 83 (92)
T ss_dssp SCEEEEEEBSSSC
T ss_pred CEEEEEEEcCCCC
Confidence 9999999998653
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.08 E-value=1e-05 Score=63.34 Aligned_cols=63 Identities=21% Similarity=0.215 Sum_probs=54.2
Q ss_pred EEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCC-ccceeEEEeCC
Q 043940 3 AHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSAD-LEHVKAHLENG 81 (123)
Q Consensus 3 ~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd-~~~i~A~~~nG 81 (123)
.|.+.+.|||+++++|++.-.+ ..|+|+ .|.|+|.+.||..+. ..-..|.|+||
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~g-deL~v~------------------------~g~~rR~i~LP~~L~~~~v~~A~~~~~ 360 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYG-PEVTVE------------------------AGDQRRNIFLPPALSGRPITGAKFQNN 360 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEET-TEEEEE------------------------ETTEEEEEECCTTTTTCCEEEEEEETT
T ss_pred cEEEEEECCCCCHHHeEEEEEC-CeEEEE------------------------ECCEeecccCCHHHcCCCccccEEECC
Confidence 4789999999999999999998 999998 345999999998874 44578999999
Q ss_pred EEEEEEecc
Q 043940 82 ALRIKVPEL 90 (123)
Q Consensus 82 vL~I~~PK~ 90 (123)
.|+|++-..
T Consensus 361 ~L~i~~~~~ 369 (374)
T 3igf_A 361 YLIISFLEH 369 (374)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEehh
Confidence 999998643
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.90 E-value=2.1e-05 Score=53.43 Aligned_cols=69 Identities=14% Similarity=0.313 Sum_probs=57.4
Q ss_pred CcEEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCC-CccceeEE
Q 043940 1 PTAHVIALDIPVMK--KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSA-DLEHVKAH 77 (123)
Q Consensus 1 ~d~~~i~~~lPG~~--~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v-d~~~i~A~ 77 (123)
++..+|.+.+|..+ ..++++.+.+ ..+.+.. ..|.-++.||..| +.+..+|+
T Consensus 12 ~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~------------------------~PYyLRL~LP~~V~e~~~~kA~ 66 (134)
T 2k8q_A 12 EEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL------------------------SPYYLRLRFPHELIDDERSTAQ 66 (134)
T ss_dssp SSEEEEEEECCSSCCCSSSCCCEECS-SSEEECS------------------------SSSCEEECCSSCEECCSSCEEE
T ss_pred CCEEEEEEEcCccccCccccEEEEeC-CEEEEec------------------------CCeEEEecCCCeeecCCCccee
Confidence 46788999999999 8899999999 7766652 2255789999999 88999999
Q ss_pred Ee--CCEEEEEEecccccc
Q 043940 78 LE--NGALRIKVPELAEEK 94 (123)
Q Consensus 78 ~~--nGvL~I~~PK~~~~~ 94 (123)
|+ .|.|+|+|||..+.+
T Consensus 67 YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 67 YDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp EETTTTEEEEEEEESSTTC
T ss_pred EeccCCEEEEEEeCCCCCC
Confidence 95 799999999986654
No 17
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00036 Score=46.05 Aligned_cols=69 Identities=14% Similarity=0.313 Sum_probs=55.5
Q ss_pred CcEEEEEEEcCCCC--CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCC-CccceeEE
Q 043940 1 PTAHVIALDIPVMK--KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSA-DLEHVKAH 77 (123)
Q Consensus 1 ~d~~~i~~~lPG~~--~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v-d~~~i~A~ 77 (123)
++..+|.+.+|-++ ..++++.+.+ ..+.... ..|.-++.||..+ +.+.-+|+
T Consensus 26 defv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~------------------------~PYyLRL~lP~~vved~~~~A~ 80 (115)
T 3eud_A 26 EEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL------------------------SPYYLRLRFPHELIDDERSTAQ 80 (115)
T ss_dssp SSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEE------------------------TTEEEEEECSSCEECSTTCEEE
T ss_pred CCEEEEEEEcCceecccCccEEEEeC-CEEEEec------------------------CCeEEEEecCcceecCCCcceE
Confidence 35678899999877 7799999998 7766662 2266789999998 77788999
Q ss_pred Ee--CCEEEEEEecccccc
Q 043940 78 LE--NGALRIKVPELAEEK 94 (123)
Q Consensus 78 ~~--nGvL~I~~PK~~~~~ 94 (123)
|+ +|.++|++||..+.+
T Consensus 81 YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 81 YDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp EETTTTEEEEEEEESSTTC
T ss_pred EeCCCcEEEEEEcCCcCCC
Confidence 95 899999999987653
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.55 E-value=0.0013 Score=43.78 Aligned_cols=71 Identities=11% Similarity=0.167 Sum_probs=58.4
Q ss_pred cEEEEEEEcCCC---CCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEE-cCCCCCccceeEE
Q 043940 2 TAHVIALDIPVM---KKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFK-MPMSADLEHVKAH 77 (123)
Q Consensus 2 d~~~i~~~lPG~---~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~~vd~~~i~A~ 77 (123)
+...|.+.+||+ .++++.|.+.. +.|.|...... +. .|.-.+. |-..|+++.....
T Consensus 30 ~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---------~~----------~y~~~~~~L~~~I~~e~S~~~ 89 (127)
T 1x5m_A 30 KFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---------GK----------SYSMIVNNLLKPISVEGSSKK 89 (127)
T ss_dssp TEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---------SS----------CEEEEEECBSSCCCTTTCEEE
T ss_pred CEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---------CC----------cEEEEhHHhcCccCcccCEEE
Confidence 577899999999 89999999999 99999863211 11 2556775 9999999998999
Q ss_pred EeCCEEEEEEecccc
Q 043940 78 LENGALRIKVPELAE 92 (123)
Q Consensus 78 ~~nGvL~I~~PK~~~ 92 (123)
+..+.|.|+|-|...
T Consensus 90 v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 90 VKTDTVLILCRKKVE 104 (127)
T ss_dssp EETTEEEEEEECSSS
T ss_pred EeCCEEEEEEEECCC
Confidence 999999999999875
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.43 E-value=0.0011 Score=44.83 Aligned_cols=85 Identities=13% Similarity=0.200 Sum_probs=62.2
Q ss_pred CcEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeecc---EEEEEEEcCCCCCccceeEE
Q 043940 1 PTAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFG---KFWRQFKMPMSADLEHVKAH 77 (123)
Q Consensus 1 ~d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~---~f~r~~~LP~~vd~~~i~A~ 77 (123)
++...|++.++|+.++++.|.+.. +.|.|+..... +. ..+.....| .|.-.+.|-..|+++..+.+
T Consensus 29 ~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~--------~~--~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 29 PDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRD--------GN--FLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp TTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCC--------HH--HHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCC--------Cc--ccccccccCcceeEEEeccccccCCchhCEEE
Confidence 357889999999999999999999 99999864322 00 000000001 36667889999999998889
Q ss_pred EeCCEEEEEEeccccccCC
Q 043940 78 LENGALRIKVPELAEEKRR 96 (123)
Q Consensus 78 ~~nGvL~I~~PK~~~~~~~ 96 (123)
+..+.|.|+|.|+....+.
T Consensus 98 v~~~kIeI~L~K~e~~~W~ 116 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQRWG 116 (134)
T ss_dssp ECSSEEEEEEEESSSCCCS
T ss_pred EeCCEEEEEEEECCCCccc
Confidence 9999999999998754433
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.10 E-value=0.005 Score=40.66 Aligned_cols=71 Identities=18% Similarity=0.306 Sum_probs=56.1
Q ss_pred cEEEEEEEcC-CC-CCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEe
Q 043940 2 TAHVIALDIP-VM-KKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLE 79 (123)
Q Consensus 2 d~~~i~~~lP-G~-~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~ 79 (123)
+...|++.|| |+ +.++|.|.+.. +.|.|...... +.. +.-...|...|+++...-.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---------~~~----------~~~~~~L~~~I~~e~S~w~i~ 88 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---------GER----------VLMEGKLTHKINTESSLWSLE 88 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---------SEE----------EEEEEEBSSCBCTTTCEEEEC
T ss_pred cEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---------CCc----------eEEcccccCcCCCcCCEEEEe
Confidence 5678999999 87 89999999999 99999854211 111 224567999999999999998
Q ss_pred CCE-EEEEEecccc
Q 043940 80 NGA-LRIKVPELAE 92 (123)
Q Consensus 80 nGv-L~I~~PK~~~ 92 (123)
++. |.|+|-|...
T Consensus 89 ~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 89 PGKCVLVNLSKVGE 102 (124)
T ss_dssp TTSEEEEEECBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 885 9999999864
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.04 E-value=0.0031 Score=41.62 Aligned_cols=68 Identities=12% Similarity=0.229 Sum_probs=54.0
Q ss_pred cEEEEEEEcCC---CCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE
Q 043940 2 TAHVIALDIPV---MKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL 78 (123)
Q Consensus 2 d~~~i~~~lPG---~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~ 78 (123)
+...|++.||. ++..||.|.+.. +.|.|... . .. +.-...|...|+.+...-.+
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g----------~~----------~~~~g~L~~~I~~deS~w~i 82 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLK--G----------QP----------AIIDGELYNEVKVEESSWLI 82 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEET--T----------SC----------CSEEEEBSSCBCGGGCEEEE
T ss_pred ceEEEEEECCCCCcccccceEEEEEc-CEEEEEEc--C----------cc----------eEEeccccccccccccEEEE
Confidence 56889999994 789999999999 88888632 1 00 11255789999999989999
Q ss_pred eCC-EEEEEEecccc
Q 043940 79 ENG-ALRIKVPELAE 92 (123)
Q Consensus 79 ~nG-vL~I~~PK~~~ 92 (123)
++| .|.|+|-|...
T Consensus 83 ~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 83 ADGAVVTVHLEKINK 97 (121)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 998 99999999854
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.87 E-value=0.0058 Score=40.46 Aligned_cols=70 Identities=13% Similarity=0.076 Sum_probs=56.8
Q ss_pred cEEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCC
Q 043940 2 TAHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENG 81 (123)
Q Consensus 2 d~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nG 81 (123)
+...|++.+|+. +++.|.+.. +.|.+++.... .+ ..|.-.+.|-..|+++..+.++.++
T Consensus 13 ~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~--------~~----------~~y~~~l~L~~~I~~e~S~~~v~~~ 71 (125)
T 1ejf_A 13 DYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS--------DN----------FKHLNEIDLFHCIDPNDSKHKRTDR 71 (125)
T ss_dssp SEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT--------TT----------EEEEEEEEBSSCEEEEEEEEEECSS
T ss_pred CEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC--------CC----------ceEEEEEEccceeccccCEEEECCC
Confidence 567899999995 799999999 99999876422 11 1256678899999999999999889
Q ss_pred EEEEEEecccc
Q 043940 82 ALRIKVPELAE 92 (123)
Q Consensus 82 vL~I~~PK~~~ 92 (123)
.|.|+|.|..+
T Consensus 72 kiei~L~K~~~ 82 (125)
T 1ejf_A 72 SILCCLRKGES 82 (125)
T ss_dssp CEEEEEEESST
T ss_pred EEEEEEEECCC
Confidence 99999999864
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.85 E-value=0.0022 Score=42.79 Aligned_cols=68 Identities=13% Similarity=0.212 Sum_probs=54.0
Q ss_pred cEEEEEEEcC-C--CCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEE
Q 043940 2 TAHVIALDIP-V--MKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHL 78 (123)
Q Consensus 2 d~~~i~~~lP-G--~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~ 78 (123)
+...|++.|| | ++.++|.|.+.. +.|.|... . . .+ .-...|...|+++...-.+
T Consensus 17 ~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g---------~-~~----------~~~~~L~~~I~~e~s~w~i 73 (131)
T 1wfi_A 17 AELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLK--G---------Q-PP----------VVDGELYNEVKVEESSWLI 73 (131)
T ss_dssp SEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEET--T---------S-CC----------SBCSCBSSCBCSTTCEEEE
T ss_pred CEEEEEEECCCCCcccccceEEEEeC-CEEEEEEC--C---------c-eE----------EEecccccccccccCEEEE
Confidence 5678999999 6 899999999999 99999842 1 0 01 1234588899999988999
Q ss_pred eCC-EEEEEEecccc
Q 043940 79 ENG-ALRIKVPELAE 92 (123)
Q Consensus 79 ~nG-vL~I~~PK~~~ 92 (123)
.+| .|.|+|-|...
T Consensus 74 ~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 74 EDGKVVTVHLEKINK 88 (131)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 998 89999999865
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.69 E-value=0.013 Score=39.06 Aligned_cols=66 Identities=9% Similarity=0.109 Sum_probs=52.1
Q ss_pred cEEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 2 TAHVIALDIP-VMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 2 d~~~i~~~lP-G~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+...|++.|| |++.++|.|.+.. +.|.|... . .. .-...|...|+++...-.+.+
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g----------~~-----------~~~~~L~~~I~~e~S~w~i~~ 69 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G----------EI-----------VIDGELLHEVDVSSLWWVING 69 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEET-TEEEEEET--T----------EE-----------EEEEEBSSCEEEEEEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--C----------Ee-----------eEccccccccccccCEEEEeC
Confidence 5678999995 8999999999999 99998742 1 00 124578899999998889999
Q ss_pred CEEEEEEeccc
Q 043940 81 GALRIKVPELA 91 (123)
Q Consensus 81 GvL~I~~PK~~ 91 (123)
+.|.|+|-|..
T Consensus 70 ~kv~i~L~K~~ 80 (131)
T 2o30_A 70 DVVDVNVTKKR 80 (131)
T ss_dssp TEEEEEEEESS
T ss_pred CEEEEEEEECC
Confidence 99999999983
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.64 E-value=0.012 Score=40.63 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=54.5
Q ss_pred cEEEEEEEcC-CCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 2 TAHVIALDIP-VMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 2 d~~~i~~~lP-G~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+...|++.|| |++..+|.|.+.. +.|.|... . .. + -...|...|+++...-++.+
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--g----------~~----------~-l~g~L~~~I~~eeS~w~i~~ 78 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--G----------RE----------I-LKGKLFDSTIADEGTWTLED 78 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--T----------EE----------E-EEEEBSSCBCGGGCEEEEEC
T ss_pred CEEEEEEECCCCCcccceEEEEec-CEEEEEEC--C----------EE----------E-EeeccccccCccccEEEEcC
Confidence 5678999998 8899999999999 99988742 1 00 1 35679999999999999998
Q ss_pred CE-EEEEEecccc
Q 043940 81 GA-LRIKVPELAE 92 (123)
Q Consensus 81 Gv-L~I~~PK~~~ 92 (123)
+. |.|+|-|...
T Consensus 79 ~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 79 RKMVRIVLTKTKR 91 (157)
T ss_dssp CCEEEEEEEBSSC
T ss_pred CcEEEEEEEEcCC
Confidence 85 9999999864
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.0022 Score=43.16 Aligned_cols=73 Identities=12% Similarity=0.161 Sum_probs=53.7
Q ss_pred EEEEEEEcCCCCCCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCE
Q 043940 3 AHVIALDIPVMKKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGA 82 (123)
Q Consensus 3 ~~~i~~~lPG~~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGv 82 (123)
...|++.+|++. ++.|.+.. +.|.+++.... .....+. ..|.-.+.|...|+++..+.++.++.
T Consensus 24 ~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~----~~g~~~~---------~~y~~~l~L~~~Idpe~S~~~v~~~~ 87 (134)
T 2cg9_X 24 YVLITVSIADCD--APELTIKP-SYIELKAQSKP----HVGDENV---------HHYQLHIDLYKEIIPEKTMHKVANGQ 87 (134)
T ss_dssp EEEEECCCSSEE--SCCCCBCS-SEEEECCEEC-----------C---------EEBCEEEECSSCCCSSSEEEEECCC-
T ss_pred EEEEEEEecCCC--ceEEEEEC-CEEEEEEeccc----ccCCccC---------ceEEEEEEChhhccccccEEEECCCE
Confidence 478899999974 88888988 89999865322 0000000 12556789999999999999999998
Q ss_pred -EEEEEeccc
Q 043940 83 -LRIKVPELA 91 (123)
Q Consensus 83 -L~I~~PK~~ 91 (123)
|.|+|.|..
T Consensus 88 ~vei~L~K~~ 97 (134)
T 2cg9_X 88 HYFLKLYKKD 97 (134)
T ss_dssp -CEEEEEECS
T ss_pred EEEEEEEECC
Confidence 999999987
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=95.82 E-value=0.016 Score=39.73 Aligned_cols=69 Identities=10% Similarity=0.210 Sum_probs=54.7
Q ss_pred cEEEEEEEcCCCCCCCeEEEEe-cCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeC
Q 043940 2 TAHVIALDIPVMKKDEVKIEVE-ENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLEN 80 (123)
Q Consensus 2 d~~~i~~~lPG~~~edi~I~i~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~n 80 (123)
+...|++.||++ +++.|.+. . +.|.+++. .. .+. .|.-.+.|=..|+++ .+.++..
T Consensus 14 ~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~--------~~~----------~y~~~l~L~~~Idpe-S~~~v~~ 70 (150)
T 2kmw_A 14 DKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA--------QGE----------RFEFSLELYGKIMTE-YRKNVGL 70 (150)
T ss_dssp SEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT--------TTE----------EEEEEEEBSSCEEEE-EEEEEES
T ss_pred CEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC--------CCc----------eEEEEeEhhhccccc-ceEEecC
Confidence 568899999997 47899998 6 89999986 11 111 256678899999999 8888888
Q ss_pred CEEEEEEeccccc
Q 043940 81 GALRIKVPELAEE 93 (123)
Q Consensus 81 GvL~I~~PK~~~~ 93 (123)
..+.|+|.|+.+.
T Consensus 71 ~kIei~L~K~e~~ 83 (150)
T 2kmw_A 71 RNIIFSIQKEERS 83 (150)
T ss_dssp SSEEEEEEECCSS
T ss_pred CEEEEEEEECCCC
Confidence 8899999998654
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=87.91 E-value=1.3 Score=26.75 Aligned_cols=33 Identities=9% Similarity=0.199 Sum_probs=28.9
Q ss_pred EEEEEEEcCCCCCccceeEEEeCCEEEEEEeccc
Q 043940 58 KFWRQFKMPMSADLEHVKAHLENGALRIKVPELA 91 (123)
Q Consensus 58 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 91 (123)
.|.-.+.|| .++.+.|+..+.+|.|+|+.-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477899999 789999999999999999987654
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=85.41 E-value=3.7 Score=25.16 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=30.0
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEecccc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVPELAE 92 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~~ 92 (123)
..|.-.+.|| .++.+.|+-.+.+|.|+|+--+...
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCG
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCc
Confidence 3477899999 7899999999999999999877654
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=85.31 E-value=1.7 Score=26.51 Aligned_cols=33 Identities=9% Similarity=0.145 Sum_probs=29.1
Q ss_pred EEEEEEEcCCCCCccceeEEEeCCEEEEEEeccc
Q 043940 58 KFWRQFKMPMSADLEHVKAHLENGALRIKVPELA 91 (123)
Q Consensus 58 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 91 (123)
.|.-.+.|| .++.+.|+-.+.+|.|+|+.-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 377899999 889999999999999999987654
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=84.46 E-value=2.1 Score=26.98 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=28.5
Q ss_pred EEEEEEEcCCCCCccceeEEEeCCEEEEEEecc
Q 043940 58 KFWRQFKMPMSADLEHVKAHLENGALRIKVPEL 90 (123)
Q Consensus 58 ~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 90 (123)
.|.-.+.|| +++.+.|+..+.+|.|+|.--+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 477899999 88999999999999999998654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=83.84 E-value=2 Score=26.77 Aligned_cols=32 Identities=6% Similarity=0.101 Sum_probs=28.7
Q ss_pred EEEEEEcCCCCCccceeEEEeCCEEEEEEeccc
Q 043940 59 FWRQFKMPMSADLEHVKAHLENGALRIKVPELA 91 (123)
Q Consensus 59 f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 91 (123)
|.-.+.|| +++.+.|+-.+.+|.|+|+--+..
T Consensus 13 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 13 FSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 77789999 899999999999999999987754
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=83.08 E-value=2.5 Score=26.29 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=28.8
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEecc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVPEL 90 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 90 (123)
..|.-.+.|| .++.+.|+..++++.|+|+--+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 3478899999 88999999999999999987664
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=79.93 E-value=8.8 Score=25.75 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=30.2
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEeccc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVPELA 91 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 91 (123)
..|.-.+.|| .++.+.|+..+.+|.|+|+--+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 4588899999 789999999999999999988765
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=79.08 E-value=5.6 Score=25.46 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=30.6
Q ss_pred cEEEEEEEcCCCCCccceeEEEeC-CEEEEEEecccc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLEN-GALRIKVPELAE 92 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~n-GvL~I~~PK~~~ 92 (123)
..|.-.+.|| +++.+.|+..+.+ |.|+|+.-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 4688899999 7899999999999 999999987653
No 36
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=74.08 E-value=4.6 Score=25.48 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=17.0
Q ss_pred CCCeEEEEecCcEEEEEEEEec
Q 043940 15 KDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~ 36 (123)
|+.|+|++++ +.++|+|.+-.
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG~ 40 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRGT 40 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 5788999998 99999987444
No 37
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=71.97 E-value=9.3 Score=26.54 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=33.0
Q ss_pred CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCEEEEEEecc
Q 043940 15 KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGALRIKVPEL 90 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 90 (123)
|+.|+|++++ +.++|+|.+-. ..+.| +.. +....+||.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG~----------------------L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKGE----------------------LTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 5789999998 99999987544 44444 543 45567899988876543
No 38
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=71.83 E-value=11 Score=27.01 Aligned_cols=21 Identities=14% Similarity=0.442 Sum_probs=16.6
Q ss_pred CCCeEEEEecCcEEEEEEEEec
Q 043940 15 KDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~ 36 (123)
|+.|+|++++ +.++|+|.+-.
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~ 59 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE 59 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE
Confidence 5778889988 88999887544
No 39
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=70.49 E-value=6.3 Score=27.19 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=29.6
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEeccc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVPELA 91 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 91 (123)
..|.-.+.|| +++.+.|+..+.+|.|+|+--+..
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 3588899999 889999999999999999987654
No 40
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=67.05 E-value=7.9 Score=27.11 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=30.2
Q ss_pred CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCEEEEEEe
Q 043940 15 KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 88 (123)
|+.++|++.+ +.++|+|.+-. ..+.|.-| . ++..++++.|.|..+
T Consensus 14 P~gV~v~i~~-~~V~VkGpkG~----------------------L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPKGE----------------------LEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSSCE----------------------EEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCCeE----------------------EEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 5789999988 99999976444 44444322 2 444567888888753
No 41
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=66.50 E-value=14 Score=25.64 Aligned_cols=44 Identities=18% Similarity=0.372 Sum_probs=31.2
Q ss_pred CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCEEEEEEe
Q 043940 15 KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 88 (123)
|+.|+|++.+ +.++|+|.+-. ..+.| +.. ++..++++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGpkG~----------------------L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPKGE----------------------LEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSSCE----------------------EEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCCcE----------------------EEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 5889999998 99999977444 44444 433 444567888888754
No 42
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=66.48 E-value=23 Score=23.45 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=29.4
Q ss_pred cEEEEEEEcCCCCCccceeEEEe-CCEEEEEEecccc
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLE-NGALRIKVPELAE 92 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~-nGvL~I~~PK~~~ 92 (123)
..|.-.+.|| .++.+.|+..+. ++.|+|+.-+...
T Consensus 53 d~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 53 EAHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred CEEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 4588899999 789999999995 6799999877654
No 43
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=66.45 E-value=10 Score=26.45 Aligned_cols=47 Identities=15% Similarity=0.225 Sum_probs=32.8
Q ss_pred CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCEEEEEEecc
Q 043940 15 KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGALRIKVPEL 90 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 90 (123)
|+.++|++++ +.++|+|.+-. ..+.|. +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpkG~----------------------L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDNGS----------------------VTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4789999999 99999987544 444442 333 44557899988876543
No 44
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=65.27 E-value=36 Score=24.56 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=45.4
Q ss_pred EEEEEE---cCCCCCCCeEEEEec-CcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEe
Q 043940 4 HVIALD---IPVMKKDEVKIEVEE-NRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLE 79 (123)
Q Consensus 4 ~~i~~~---lPG~~~edi~I~i~~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~ 79 (123)
|.+.++ |||+..+==-|.+.. ++.|.+.... ....+.-... |.+.|++.|...-|.+.|... .
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~-----------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~ 79 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK-----------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-G 79 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET-----------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-S
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC-----------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-C
Confidence 455555 999987544477773 3777776442 2234444444 789999999877788888653 6
Q ss_pred CCEEEEE
Q 043940 80 NGALRIK 86 (123)
Q Consensus 80 nGvL~I~ 86 (123)
+|.+.|.
T Consensus 80 ~g~~~vs 86 (255)
T 3qqz_A 80 DNQFVIS 86 (255)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 6665553
No 45
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=63.43 E-value=5.3 Score=23.66 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=13.2
Q ss_pred cceeEEEeCCEEEEEEe
Q 043940 72 EHVKAHLENGALRIKVP 88 (123)
Q Consensus 72 ~~i~A~~~nGvL~I~~P 88 (123)
..|.|.|+||+|+-.=|
T Consensus 3 k~IeAiYEnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQK 19 (69)
T ss_dssp CCEEEEEETTEEEESSC
T ss_pred ceEEEEEECCEEeECCc
Confidence 35899999999975444
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=61.88 E-value=29 Score=24.30 Aligned_cols=21 Identities=19% Similarity=0.583 Sum_probs=17.7
Q ss_pred CCCeEEEEecCcEEEEEEEEec
Q 043940 15 KDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~ 36 (123)
|+.++|++.+ +.++|+|.+-.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRGT 33 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCcEEEEeC-CEEEEEcCCeE
Confidence 6889999998 99999987544
No 47
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=56.68 E-value=22 Score=24.93 Aligned_cols=21 Identities=24% Similarity=0.514 Sum_probs=17.6
Q ss_pred CCCeEEEEecCcEEEEEEEEec
Q 043940 15 KDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~ 36 (123)
|+.++|++.+ +.++|+|.+-.
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRGK 33 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 5889999998 99999987544
No 48
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=55.23 E-value=17 Score=25.43 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=18.4
Q ss_pred CCCCeEEEEecCcEEEEEEEEec
Q 043940 14 KKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 14 ~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
=|+.++|++.+ +.++|+|.+-.
T Consensus 12 IP~gV~v~i~~-~~V~VkGPkG~ 33 (188)
T 4a17_E 12 IPDKVTITAKQ-RVVEVKGPLGT 33 (188)
T ss_dssp CCTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCcEEEEeC-CEEEEEcCCeE
Confidence 47899999999 99999987544
No 49
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=55.23 E-value=21 Score=25.09 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=19.3
Q ss_pred cCCCCCCCeEEEEecCcEEEEEEEEec
Q 043940 10 IPVMKKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 10 lPG~~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
.|=-=|+.++|++.+ +.++|+|.+-.
T Consensus 8 ~pI~IP~gV~V~i~~-~~VtVkGpkG~ 33 (192)
T 2zkr_e 8 QTVDIPENVDITLKG-RTVIVKGPRGT 33 (192)
T ss_dssp --CCCCTTCEEEEET-TEEEEEETTEE
T ss_pred CcEEcCCCCEEEEeC-CEEEEECCCeE
Confidence 344447899999999 99999987544
No 50
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=51.40 E-value=6.4 Score=28.47 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=16.4
Q ss_pred CCCeEEEEecCcEEEEEEEEec
Q 043940 15 KDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~ 36 (123)
|+.|+|++++ +.++|+|.+-.
T Consensus 54 P~gV~V~i~~-~~VtVKGPkG~ 74 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPLGE 74 (223)
T ss_dssp STTSCEEESS-SEEEECCSSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE
Confidence 5778889888 88999876444
No 51
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=51.32 E-value=29 Score=25.45 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=28.2
Q ss_pred CCCCeEEEEecCcEEEEEEEEeccCCccccccCceEE-EEeeeccEEEEEEEcCCC
Q 043940 14 KKDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQ-RAERTFGKFWRQFKMPMS 68 (123)
Q Consensus 14 ~~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~-~~e~~~~~f~r~~~LP~~ 68 (123)
.++++.| .+ |.|+|++.+.. +..+. .....+|.|+-+++||..
T Consensus 31 ~~~Nv~v--~~-G~L~L~~~k~t---------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQ-GSLTIWLDSTS---------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ET-TEEEEEECSSC---------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--EC-CEEEEEEecCC---------CCEEEECceEeeEEEEEEEEeCCC
Confidence 3455555 67 88999976433 12222 334668999999999964
No 52
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=48.63 E-value=49 Score=21.22 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=24.8
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEe
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 88 (123)
....-.|.||.+++...+...+...-|.|.+.
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 34667899999999999999999999999873
No 53
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=48.36 E-value=14 Score=24.19 Aligned_cols=16 Identities=19% Similarity=0.596 Sum_probs=14.3
Q ss_pred eeEEEeCCEEEEEEec
Q 043940 74 VKAHLENGALRIKVPE 89 (123)
Q Consensus 74 i~A~~~nGvL~I~~PK 89 (123)
+.+.+.+|||+|.++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7889999999999973
No 54
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=45.52 E-value=11 Score=23.84 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=19.1
Q ss_pred eeEEEeCCEEEEEEeccccccCCCCeEEEeeecC
Q 043940 74 VKAHLENGALRIKVPELAEEKRRQPKVISINEEP 107 (123)
Q Consensus 74 i~A~~~nGvL~I~~PK~~~~~~~~~~~I~I~~~~ 107 (123)
+.+.+.+|||+|+++. ..+|-|..-+
T Consensus 30 ~D~e~~~gVLti~f~~--------~~~~VINkQ~ 55 (106)
T 1ew4_A 30 IDCEINGGVLTITFEN--------GSKIIINRQE 55 (106)
T ss_dssp CEEEEETTEEEEECTT--------SCEEEEEEET
T ss_pred EeeeccCCEEEEEECC--------CCEEEEeCCc
Confidence 7889999999999963 3455565543
No 55
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=44.62 E-value=25 Score=24.96 Aligned_cols=45 Identities=13% Similarity=0.345 Sum_probs=26.6
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE---eeeccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA---ERTFGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~---e~~~~~f~r~~~LP~~ 68 (123)
+.+.+++.|+|++.+... ......++... ...+|.|+-+++||..
T Consensus 52 ~~v~~~G~L~I~~~~~~~----~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 52 SALDGNGNLVITARQEAD----GGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EEECSSSCEEEEEEECTT----SCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred eEEecCCEEEEEEEecCC----CCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 345555889999886541 11112222222 2447889999999953
No 56
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=43.02 E-value=60 Score=24.44 Aligned_cols=46 Identities=15% Similarity=0.285 Sum_probs=27.7
Q ss_pred EEEecCcEEEEEEEEeccCCccccccC--ceEE-------EE--eeeccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEG--EKWQ-------RA--ERTFGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~--~~~~-------~~--e~~~~~f~r~~~LP~~ 68 (123)
+.+.+ |.|+|++.+.... ....+. ..|. .. ...+|.|+-+++||..
T Consensus 89 v~v~d-G~L~I~a~~~~~~--~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 89 VSVKK-GCLRIINTVLSPT--EGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp EEEET-TEEEEECEEEEEE--ECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred EEEEC-CEEEEEEEeCCCC--cccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 44557 9999999887510 000010 1222 22 2567999999999975
No 57
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=41.32 E-value=15 Score=25.36 Aligned_cols=43 Identities=14% Similarity=0.295 Sum_probs=29.8
Q ss_pred CCCeEEEEecCcEEEEEEEEeccCCccccccCceEEEEeeeccEEEEEEEcCCCCCccceeEEEeCCEEEEEE
Q 043940 15 KDEVKIEVEENRVLRMSGERKSDDYYKEGVEGEKWQRAERTFGKFWRQFKMPMSADLEHVKAHLENGALRIKV 87 (123)
Q Consensus 15 ~edi~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 87 (123)
|+.|+|++.+ +.++|+|.+-. ..+.| +.. ++..++++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGpkG~----------------------L~~~~--~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKNGE----------------------LTRTL--NDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBTTBC----------------------CEEEC--CSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcCCEE----------------------EEEEC--CCC-----EEEEEeCCEEEEEE
Confidence 5788899988 99999876544 33443 443 44556788888873
No 58
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=40.30 E-value=17 Score=21.44 Aligned_cols=24 Identities=25% Similarity=0.432 Sum_probs=19.8
Q ss_pred CCCCCCeEEEEecCcEEEEEEEEec
Q 043940 12 VMKKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 12 G~~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
-|+.+.|.+.... |.|.|+|+.=.
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~~L~ 40 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGEKLG 40 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEECCC
T ss_pred EECCCEEEEEeCc-eEEEEEcCCcE
Confidence 3678889999999 99999998543
No 59
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=35.35 E-value=84 Score=19.80 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=27.8
Q ss_pred cEEEEEEEcCCCC-CccceeEEEeCCEEEEEEe
Q 043940 57 GKFWRQFKMPMSA-DLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 57 ~~f~r~~~LP~~v-d~~~i~A~~~nGvL~I~~P 88 (123)
....-.|.||.++ +...+...+...-|.|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 4567789999888 9999999999999999884
No 60
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=34.73 E-value=72 Score=22.70 Aligned_cols=44 Identities=7% Similarity=0.082 Sum_probs=26.4
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE-eeeccEEEEEEEcCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA-ERTFGKFWRQFKMPM 67 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~LP~ 67 (123)
+.+.++|.|+|++.+... ......++... ...+|.|+-++++|.
T Consensus 63 v~v~~~G~L~l~~~~~~~----~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPAY----NKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEET----TEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCCC----CceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 566665789999887651 00111122211 245789999999984
No 61
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=34.52 E-value=97 Score=20.58 Aligned_cols=32 Identities=9% Similarity=0.286 Sum_probs=27.6
Q ss_pred cEEEEEEEcCCCCCccceeEEEeCCEEEEEEe
Q 043940 57 GKFWRQFKMPMSADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 57 ~~f~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 88 (123)
....-.|.||.++....+...+...-|+|.+.
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 44677899999999999999999999999873
No 62
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=32.63 E-value=36 Score=18.78 Aligned_cols=22 Identities=5% Similarity=0.285 Sum_probs=18.6
Q ss_pred CCCCeEEEEecCcEEEEEEEEec
Q 043940 14 KKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 14 ~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
.-+||+|+.++ ..++|.|+...
T Consensus 31 gyndinvtwdg-dtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDG-DTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECS-SCEEEEEECCC
T ss_pred CcccceeEEcC-CEEEEEeEEcC
Confidence 45799999999 99999998665
No 63
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=31.56 E-value=98 Score=19.46 Aligned_cols=32 Identities=6% Similarity=0.089 Sum_probs=27.9
Q ss_pred cEEEEEEEcCCC--CCccceeEEEeCCEEEEEEe
Q 043940 57 GKFWRQFKMPMS--ADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 57 ~~f~r~~~LP~~--vd~~~i~A~~~nGvL~I~~P 88 (123)
....-.|.||.+ +....+...+...-|.|.+.
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred ceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 457788999988 89999999999999999886
No 64
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=31.47 E-value=84 Score=23.54 Aligned_cols=44 Identities=14% Similarity=0.053 Sum_probs=25.2
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE-eeecc-EEEEEEEcCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA-ERTFG-KFWRQFKMPM 67 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~~-~f~r~~~LP~ 67 (123)
+.+.+ |.|+|++.+... ....-...+... ...+| .|+-+++||.
T Consensus 76 v~v~d-G~L~I~a~~~~~---~~~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 76 SYVAD-GELKMWATRKPG---SDKINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp EEEET-TEEEEECEECTT---SSCEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred eEEEC-CEEEEEEEecCC---CCCEEEEEEEECceeecCeEEEEEEECCC
Confidence 44557 999999987631 001111122221 13355 8999999984
No 65
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=31.32 E-value=31 Score=22.67 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.6
Q ss_pred cceeEEEeCCEEEEEEe
Q 043940 72 EHVKAHLENGALRIKVP 88 (123)
Q Consensus 72 ~~i~A~~~nGvL~I~~P 88 (123)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45778899999999996
No 66
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=31.21 E-value=87 Score=21.49 Aligned_cols=44 Identities=7% Similarity=0.154 Sum_probs=25.4
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE-eeeccEEEEEEEcCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA-ERTFGKFWRQFKMPM 67 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~LP~ 67 (123)
+.+.+++.|+|++.+... .......+... ...+|.|+-+++||.
T Consensus 39 v~v~~~G~L~i~~~~~~~----~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDGKLKLGLTSSAY----NKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTSCEEEEEEEEET----TEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCCEEEEEEecCCC----CceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 455555889999876641 00011111111 235789999999995
No 67
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A*
Probab=30.50 E-value=1.2e+02 Score=21.93 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=25.4
Q ss_pred EEEecCcEEEEEEEEeccCCc------cccccCceEEEEe-eecc-EEEEEEEcC
Q 043940 20 IEVEENRVLRMSGERKSDDYY------KEGVEGEKWQRAE-RTFG-KFWRQFKMP 66 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~------~~~~~~~~~~~~e-~~~~-~f~r~~~LP 66 (123)
+.+.+ |.|+|++.+..+... .......++.... ..+| .|+-+++||
T Consensus 58 v~v~d-G~L~I~a~~~~~~~~~~~~~~~~~y~s~~i~s~~~~~~G~~~e~r~k~p 111 (266)
T 4ate_A 58 AFVSD-GFLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKAS 111 (266)
T ss_dssp EEEET-TEEEEECEESSCGGGSSCTTTSCCEEECEEEEEEEECTTCEEEEEEECC
T ss_pred EEEeC-CcEEEEEEecCCCcccccCCCCccEEEEEEEEeCcCcCCeEEEEEEEcC
Confidence 44567 999999987541000 0001122222222 4467 799999998
No 68
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=28.04 E-value=1.6e+02 Score=20.87 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=12.7
Q ss_pred EEEecCcEEEEEEEEec
Q 043940 20 IEVEENRVLRMSGERKS 36 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~ 36 (123)
+.+.+ |.|+|++.+..
T Consensus 48 v~v~~-G~L~I~a~~~~ 63 (271)
T 1dyp_A 48 ATVSK-GKLKLTTKRES 63 (271)
T ss_dssp EEEET-TEEEEEEEEEE
T ss_pred EEEEC-CEEEEEEEecc
Confidence 56678 99999998764
No 69
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=27.20 E-value=39 Score=21.89 Aligned_cols=26 Identities=8% Similarity=0.138 Sum_probs=22.3
Q ss_pred cCCCCCCCeEEEEecCcEEEEEEEEec
Q 043940 10 IPVMKKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 10 lPG~~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
-|.+.+-.|.|.+++ +.++++|.-..
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEESC
T ss_pred CCcccceeEEEEEEC-CEEEEEEECCC
Confidence 366777789999999 99999999885
No 70
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=26.64 E-value=91 Score=23.55 Aligned_cols=45 Identities=16% Similarity=0.071 Sum_probs=27.1
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE-eeecc-EEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA-ERTFG-KFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~~-~f~r~~~LP~~ 68 (123)
+.+.+ |.|+|++.+.... ......++... ...|| .|+-+++||..
T Consensus 107 v~v~d-G~L~I~a~~~~g~---~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 107 SYVAD-GELKMWATRKPGS---DKINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp EEEET-TEEEEECEECTTS---SCEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred EEEEC-CEEEEEEEecCCC---CcEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 45567 9999999876410 00111222221 25589 59999999964
No 71
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans}
Probab=26.20 E-value=1.1e+02 Score=22.23 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=26.2
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEE-------E-EeeeccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQ-------R-AERTFGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~-------~-~e~~~~~f~r~~~LP~~ 68 (123)
+.+.+ |.|+|++.+.... ....+..|. . ....+|.|+-+++||..
T Consensus 67 v~v~~-G~L~I~a~~~~~~---~~~~g~~~~~~sg~i~s~~~~~yG~~E~r~k~p~g 119 (280)
T 3juu_A 67 ISLNN-GSLQITTTMLPEP---IVKNNKTYTHGGGYVGSRNGMTYGYYECEMKANKT 119 (280)
T ss_dssp EEEET-TEEEEECEEEEEE---EEETTEEEEEEEEEEEESSCBSSEEEEEEEECCSS
T ss_pred eEEEC-CEEEEEEEcCCCc---cccCCCeEEEEEEEEEEecceeCEEEEEEEEcCCC
Confidence 34467 9999999876410 000111111 1 12357899999999974
No 72
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=25.72 E-value=1.2e+02 Score=19.52 Aligned_cols=31 Identities=13% Similarity=0.363 Sum_probs=21.0
Q ss_pred ceeEEE---eCCEEEEEEeccccccCCCCeEEEeeec
Q 043940 73 HVKAHL---ENGALRIKVPELAEEKRRQPKVISINEE 106 (123)
Q Consensus 73 ~i~A~~---~nGvL~I~~PK~~~~~~~~~~~I~I~~~ 106 (123)
+|+..| .||+|.|++--.... ....|.|...
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg---~~~~i~i~~~ 132 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 132 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEEEECCCCEEEEEEEECCCC---CEEEEEEecC
Confidence 566666 589999998644332 4677877643
No 73
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=24.75 E-value=68 Score=20.09 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=18.2
Q ss_pred ccEEEEEEEcCCCCCccceeEEEeCC
Q 043940 56 FGKFWRQFKMPMSADLEHVKAHLENG 81 (123)
Q Consensus 56 ~~~f~r~~~LP~~vd~~~i~A~~~nG 81 (123)
.|-|.++|.||. ..++++.|.||
T Consensus 48 ~Gw~~~TI~~~~---~~~l~~~F~dG 70 (102)
T 2c3v_A 48 EGXVKVTIEAEE---GSQLRAAFNNG 70 (102)
T ss_dssp TTEEEEEECCCT---TCEEEEEEECS
T ss_pred CCceEEEEecCC---CceEEEEEeCC
Confidence 566789998884 47888999887
No 74
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=24.19 E-value=33 Score=20.55 Aligned_cols=16 Identities=25% Similarity=0.493 Sum_probs=12.8
Q ss_pred ccceeEEEeCCEEEEE
Q 043940 71 LEHVKAHLENGALRIK 86 (123)
Q Consensus 71 ~~~i~A~~~nGvL~I~ 86 (123)
-.+-++.|++|||+|.
T Consensus 46 KnkWKc~LKdGim~in 61 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNLN 61 (76)
T ss_dssp TTEEEEEEEEEEEEET
T ss_pred CceEEEEEeccEEEEC
Confidence 3457899999999873
No 75
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=23.34 E-value=1.5e+02 Score=18.75 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=27.1
Q ss_pred cEEEEEEEcCCC--CCccceeEEEeCCEEEEEEe
Q 043940 57 GKFWRQFKMPMS--ADLEHVKAHLENGALRIKVP 88 (123)
Q Consensus 57 ~~f~r~~~LP~~--vd~~~i~A~~~nGvL~I~~P 88 (123)
....-.|.||.+ +....+...+...-|.|.+.
T Consensus 17 ~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 17 AELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp SEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 345678889987 88999999999999999983
No 76
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis}
Probab=23.18 E-value=69 Score=23.47 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=24.2
Q ss_pred EEEEecCcEEEEEEEEeccCCccccccCceEEE-EeeeccE-EEEEEEcC
Q 043940 19 KIEVEENRVLRMSGERKSDDYYKEGVEGEKWQR-AERTFGK-FWRQFKMP 66 (123)
Q Consensus 19 ~I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~-~e~~~~~-f~r~~~LP 66 (123)
.+.+.+++.|+|++.+... .....++.. ....+|. |+-+++||
T Consensus 90 Nv~v~g~G~L~I~a~~~~~-----~~~Sgri~sk~~~~yG~~~E~r~Klp 134 (269)
T 3rq0_A 90 NVFLDGKSNLVIRAAKDGD-----TYYSAKLASVWEGGAGHTWEARIKFN 134 (269)
T ss_dssp TEEECSSSCEEEEEEEETT-----EEEEEEEEESSCBCSSEEEEEEEEEE
T ss_pred cEEEeCCCEEEEEEEcCCC-----CEEEEEEEEeeeccCCeEEEEEEECC
Confidence 3566634999999986631 111111211 1234676 88888888
No 77
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=22.76 E-value=1.2e+02 Score=21.48 Aligned_cols=46 Identities=15% Similarity=0.275 Sum_probs=25.8
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEEE-eeeccEEEEEEEcCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQRA-ERTFGKFWRQFKMPM 67 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~LP~ 67 (123)
+.+.+ +.|+|++.+..+.. .......++... ...+|.|+-++++|.
T Consensus 57 v~v~~-G~L~l~~~~~~~~~-~~~~ts~~i~S~~~~~yG~~e~r~K~~~ 103 (234)
T 3i4i_A 57 IELKD-GILNLSITDDMPSS-SKPYAGAEYRTRDKFGYGLYQVRMKPAK 103 (234)
T ss_dssp EEEET-TEEEEEEEECCTTC-SSSEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEEC-CEEEEEEEccCCCC-CCCEEEEEEEEeCceeCEEEEEEEEecC
Confidence 56678 89999988762000 000011112111 145789999999984
No 78
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=22.58 E-value=2.1e+02 Score=20.20 Aligned_cols=46 Identities=22% Similarity=0.324 Sum_probs=26.6
Q ss_pred EEEecCcEEEEEEEEeccCCccccccCceEEE---EeeeccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYYKEGVEGEKWQR---AERTFGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~~~~~~~~~~~~---~e~~~~~f~r~~~LP~~ 68 (123)
+.+.+ +.|+|++.+.... .......++.. ....+|.|+-+++||..
T Consensus 49 v~v~~-G~L~i~~~~~~~~--~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGG-GVLIIEARRESYE--GREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEET-TEEEEEEEEEEET--TEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEEC-CEEEEEEEeccCC--CCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 55678 9999999776300 00001111111 13457899999999953
No 79
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=22.26 E-value=1.5e+02 Score=21.05 Aligned_cols=48 Identities=8% Similarity=-0.049 Sum_probs=26.2
Q ss_pred EEEecCcEEEEEEEEeccCCc--c-ccccCceEEEE---eee-ccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYY--K-EGVEGEKWQRA---ERT-FGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~--~-~~~~~~~~~~~---e~~-~~~f~r~~~LP~~ 68 (123)
+.+.+ |.|+|++.+...... . ......++... ... +|.|+-+++||..
T Consensus 59 ~~v~~-G~L~I~~~~~~~~~~~~G~~~~~S~~i~S~~~f~~~~yG~~E~r~klp~g 113 (264)
T 2vy0_A 59 TYIVN-GTLVIEARKEIITDPNEGTFLYTSSRLKTEGKVEFSPPVVVEARIKLPKG 113 (264)
T ss_dssp EEEET-TEEEEEEEEEEEEETTTEEEEEEECEEECTTTCEECSSEEEEEEEECCCS
T ss_pred eEecC-CEEEEEEEecccCCCCCCCccEEEEEEEecCcccccCCeEEEEEEEcCCC
Confidence 45677 999999987651000 0 00011112111 233 7889988999964
No 80
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=21.53 E-value=86 Score=18.99 Aligned_cols=22 Identities=5% Similarity=0.326 Sum_probs=17.4
Q ss_pred CCCCeEEEEecCcEEEEEEEEec
Q 043940 14 KKDEVKIEVEENRVLRMSGERKS 36 (123)
Q Consensus 14 ~~edi~I~i~~~~~L~I~g~~~~ 36 (123)
.-+||+|.+++ ..++|.|....
T Consensus 75 gyndinvtfdg-dtvtvegqleg 96 (106)
T 1qys_A 75 GYNDINVTFDG-DTVTVEGQLEG 96 (106)
T ss_dssp TCCEEEEEEET-TEEEEEEEC--
T ss_pred CCcceeEEEcC-CeEEEEeEEcC
Confidence 34789999999 99999998655
No 81
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=21.53 E-value=1.6e+02 Score=20.28 Aligned_cols=20 Identities=5% Similarity=0.255 Sum_probs=15.2
Q ss_pred ccceeEEEeCCEEEEEEecc
Q 043940 71 LEHVKAHLENGALRIKVPEL 90 (123)
Q Consensus 71 ~~~i~A~~~nGvL~I~~PK~ 90 (123)
.+.+....++|.|+|.+.+.
T Consensus 53 ~~~i~~~v~~g~L~I~~~~~ 72 (221)
T 3pet_A 53 VALIQVAVKDNTLFLSIDKS 72 (221)
T ss_dssp HTTEEEEEETTEEEEEECTT
T ss_pred cceEEEEEECCEEEEEEcCC
Confidence 45677888888888888764
No 82
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans}
Probab=21.22 E-value=1.2e+02 Score=23.41 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=12.8
Q ss_pred EEEEecCcEEEEEEEEec
Q 043940 19 KIEVEENRVLRMSGERKS 36 (123)
Q Consensus 19 ~I~i~~~~~L~I~g~~~~ 36 (123)
.+.+.+ |.|+|++.+..
T Consensus 83 Nv~V~d-G~LvItA~r~~ 99 (363)
T 4asm_B 83 HVAVSG-GNLNIWASRIP 99 (363)
T ss_dssp SEEEET-TEEEEEEECCT
T ss_pred cEEEEC-CEEEEEEEecC
Confidence 345568 99999998754
No 83
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=21.16 E-value=1.8e+02 Score=18.99 Aligned_cols=35 Identities=11% Similarity=0.310 Sum_probs=23.0
Q ss_pred cEEEEEEEcCCCCCC-----CeEEEE--ecCcEEEEEEEEec
Q 043940 2 TAHVIALDIPVMKKD-----EVKIEV--EENRVLRMSGERKS 36 (123)
Q Consensus 2 d~~~i~~~lPG~~~e-----di~I~i--~~~~~L~I~g~~~~ 36 (123)
+.++=.+.|.|+.+- .|+|.+ +.+|.|.|++....
T Consensus 62 n~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~~ 103 (152)
T 3h0x_A 62 NNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKG 103 (152)
T ss_dssp SEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEETT
T ss_pred CcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEcC
Confidence 456667778777642 355554 44699999988544
No 84
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=20.14 E-value=1.7e+02 Score=19.14 Aligned_cols=35 Identities=17% Similarity=0.371 Sum_probs=21.9
Q ss_pred cEEEEEEEcCCCCCC-----CeEEEE--ecCcEEEEEEEEec
Q 043940 2 TAHVIALDIPVMKKD-----EVKIEV--EENRVLRMSGERKS 36 (123)
Q Consensus 2 d~~~i~~~lPG~~~e-----di~I~i--~~~~~L~I~g~~~~ 36 (123)
+.++=.+.|.|+.+- .|+|.+ +.+|.|.|++....
T Consensus 62 n~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~ 103 (152)
T 3dob_A 62 NHRLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKS 103 (152)
T ss_dssp SEEEEEEEEECCCCCCTTCCCEEEEEEECTTCCEEEEEEETT
T ss_pred CceeEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEcC
Confidence 455556677666532 355554 44699999988544
No 85
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A
Probab=20.09 E-value=2.4e+02 Score=20.03 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=25.8
Q ss_pred EEEecCcEEEEEEEEeccCCc--cccccCceEEEE---eeeccEEEEEEEcCCC
Q 043940 20 IEVEENRVLRMSGERKSDDYY--KEGVEGEKWQRA---ERTFGKFWRQFKMPMS 68 (123)
Q Consensus 20 I~i~~~~~L~I~g~~~~~~~~--~~~~~~~~~~~~---e~~~~~f~r~~~LP~~ 68 (123)
+.+.+ |.|+|++.+...... .......++... ...+|.|+-+++||..
T Consensus 56 ~~v~~-G~L~I~a~~~~~~~~~g~~~~tSg~i~S~~~f~~~yG~~E~r~klp~g 108 (272)
T 3azy_A 56 AFVEN-GCLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGKIEIRAKLPKG 108 (272)
T ss_dssp EEEET-TEEEEEEEEEEEECSSCEEEEEECEEECTTTCEESSEEEEEEEECCCS
T ss_pred eEEcC-CEEEEEEEcccccCCCCCEeEEEeEEEecCcccccCcEEEEEEEcCCC
Confidence 45677 999999887641000 000011111111 1347888989999953
No 86
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=20.01 E-value=1.7e+02 Score=18.30 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=20.7
Q ss_pred eeEEEeCCEEEEEEeccccccCCCCeEEEeee
Q 043940 74 VKAHLENGALRIKVPELAEEKRRQPKVISINE 105 (123)
Q Consensus 74 i~A~~~nGvL~I~~PK~~~~~~~~~~~I~I~~ 105 (123)
++|.++|.+|.|.+.+.-. ...|.|..
T Consensus 31 i~A~id~~~L~I~F~~~~~-----~vtItI~~ 57 (108)
T 3d33_A 31 ITVFTDGYLLTLKNASPDR-----DMTIRITD 57 (108)
T ss_dssp EEEEEETTEEEEEESSCCS-----EEEEEEEE
T ss_pred cEEEEECCEEEEEECCcCC-----CEEEEEEE
Confidence 6788999999999966543 47777773
Done!