Query         043945
Match_columns 518
No_of_seqs    178 out of 2052
Neff          10.8
Searched_HMMs 46136
Date          Fri Mar 29 09:50:41 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043945hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02169 fatty acid (omega-1)- 100.0 3.2E-76 6.9E-81  589.7  45.4  459   29-515    40-499 (500)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 7.6E-75 1.6E-79  554.0  40.4  449   29-516    40-499 (499)
  3 KOG0156 Cytochrome P450 CYP2 s 100.0 2.4E-74 5.1E-79  559.9  41.7  443   29-516    35-488 (489)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 7.4E-74 1.6E-78  568.8  42.0  452   29-516    44-496 (497)
  5 PLN03195 fatty acid omega-hydr 100.0 2.8E-72   6E-77  566.9  44.8  466   29-516    39-516 (516)
  6 KOG0159 Cytochrome P450 CYP11/ 100.0 3.8E-72 8.2E-77  522.2  40.7  446   29-517    59-519 (519)
  7 PLN02971 tryptophan N-hydroxyl 100.0 6.6E-72 1.4E-76  564.9  42.2  454   29-515    66-533 (543)
  8 PLN02426 cytochrome P450, fami 100.0 3.6E-71 7.8E-76  552.3  46.4  444   29-516    50-500 (502)
  9 PLN02290 cytokinin trans-hydro 100.0 2.2E-70 4.8E-75  553.6  44.2  446   29-516    51-515 (516)
 10 PLN03234 cytochrome P450 83B1; 100.0 1.4E-70 3.1E-75  553.1  41.8  450   29-515    37-498 (499)
 11 PLN02738 carotene beta-ring hy 100.0 5.7E-70 1.2E-74  552.0  44.8  449   30-518   141-597 (633)
 12 PLN02936 epsilon-ring hydroxyl 100.0 1.7E-69 3.7E-74  541.4  45.1  453   28-516    20-482 (489)
 13 PLN00168 Cytochrome P450; Prov 100.0 1.1E-69 2.3E-74  547.5  43.9  454   29-516    44-517 (519)
 14 PTZ00404 cytochrome P450; Prov 100.0   3E-70 6.4E-75  548.4  38.3  439   29-515    38-482 (482)
 15 PLN02183 ferulate 5-hydroxylas 100.0 1.5E-69 3.2E-74  546.1  41.2  452   29-515    45-511 (516)
 16 PLN02687 flavonoid 3'-monooxyg 100.0 2.7E-69 5.9E-74  544.3  43.0  454   29-516    43-509 (517)
 17 PLN02394 trans-cinnamate 4-mon 100.0 4.4E-69 9.6E-74  542.8  43.3  452   29-516    39-502 (503)
 18 PLN00110 flavonoid 3',5'-hydro 100.0 3.6E-69 7.8E-74  540.0  40.2  449   29-516    40-497 (504)
 19 PLN02966 cytochrome P450 83A1  100.0   1E-68 2.3E-73  538.6  42.2  448   29-515    38-499 (502)
 20 PLN03112 cytochrome P450 famil 100.0 1.8E-68 3.9E-73  539.4  41.9  454   29-517    41-509 (514)
 21 PLN02500 cytochrome P450 90B1  100.0 3.1E-68 6.7E-73  534.0  42.6  434   29-514    47-488 (490)
 22 PF00067 p450:  Cytochrome P450 100.0 1.6E-69 3.4E-74  544.9  30.9  450   27-512     6-463 (463)
 23 PLN02655 ent-kaurene oxidase   100.0 1.3E-67 2.9E-72  525.6  42.4  446   27-517     6-465 (466)
 24 PLN03018 homomethionine N-hydr 100.0 2.7E-66 5.9E-71  519.9  46.3  458   29-516    49-524 (534)
 25 PLN02774 brassinosteroid-6-oxi 100.0 4.5E-67 9.8E-72  521.3  39.9  422   29-514    40-462 (463)
 26 PLN02196 abscisic acid 8'-hydr 100.0 5.1E-66 1.1E-70  513.3  39.2  418   29-515    44-462 (463)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 3.6E-65 7.8E-70  506.6  40.8  432   29-516    16-450 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 6.6E-65 1.4E-69  503.4  40.7  428   29-516    39-469 (472)
 29 KOG0684 Cytochrome P450 [Secon 100.0   2E-65 4.2E-70  465.1  32.8  435   29-516    41-485 (486)
 30 PLN02302 ent-kaurenoic acid ox 100.0 2.6E-63 5.6E-68  500.7  41.8  432   29-516    51-488 (490)
 31 PLN02648 allene oxide synthase 100.0 2.5E-55 5.4E-60  431.4  33.1  397   29-493    26-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.4E-52 3.1E-57  407.4  30.1  378   46-515    26-410 (411)
 33 PF14991 MLANA:  Protein melan-  49.9     5.4 0.00012   30.1   0.0   20    9-28     32-51  (118)
 34 PF08492 SRP72:  SRP72 RNA-bind  47.4      13 0.00028   24.7   1.5    8  434-441    44-51  (59)
 35 PF12554 MOZART1:  Mitotic-spin  46.8      48   0.001   21.0   3.8   42  299-340     6-47  (48)
 36 PF05952 ComX:  Bacillus compet  42.0      26 0.00057   23.1   2.2   25  320-344     3-27  (57)
 37 PF09201 SRX:  SRX;  InterPro:   36.7      28 0.00062   27.6   2.1   23  461-483    18-40  (148)
 38 KOG3506 40S ribosomal protein   33.6      19 0.00042   23.2   0.6   11  454-464    12-22  (56)
 39 PF15102 TMEM154:  TMEM154 prot  31.3      34 0.00074   27.6   1.8   21    6-26     64-84  (146)
 40 PF12273 RCR:  Chitin synthesis  27.0      42 0.00091   26.8   1.7    9   29-37     33-41  (130)
 41 PF14483 Cut8_M:  Cut8 dimerisa  26.5      87  0.0019   18.7   2.5   13  326-338    23-35  (38)
 42 COG3954 PrkB Phosphoribulokina  25.4 4.2E+02  0.0091   22.8   7.2   94  310-441    16-122 (289)
 43 PF12508 DUF3714:  Protein of u  22.5      66  0.0014   27.9   2.1   43  370-414    52-94  (200)
 44 PF14129 DUF4296:  Domain of un  22.3 3.1E+02  0.0068   19.9   5.6   51  295-345    29-79  (87)

No 1  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.2e-76  Score=589.67  Aligned_cols=459  Identities=41%  Similarity=0.803  Sum_probs=368.7

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccCCce
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGDGV  108 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~l  108 (518)
                      |++||+..+......+++++.++.++||..+.+.|+|+|+.++++|+||+.+++|+.++...|++++.+.......|+|+
T Consensus        40 pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~~~g~gl  119 (500)
T PLN02169         40 PFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFDVLGEGI  119 (500)
T ss_pred             CcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHHhhcCcc
Confidence            89999988876555678888888888998888777799999999999999999999887778888765544445578999


Q ss_pred             eecCChhHHHhhhhcccCCChhhHHHHH-HHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCC
Q 043945          109 FAADGNLWKMQRKMIHSVMKHKKFESAL-EKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNY  187 (518)
Q Consensus       109 ~~~~g~~w~~~R~~l~~~f~~~~~~~~~-~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~  187 (518)
                      ++++|+.|+++||+++++|+..++.... ...+.+. .+.+.+.+++....+.++|+.+.+.++++|+++.++||.+.+.
T Consensus       120 ~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~  198 (500)
T PLN02169        120 LTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKL-KEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMS  198 (500)
T ss_pred             cccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccc
Confidence            9999999999999999999998776432 2233333 5677777776545567899999999999999999999998765


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCchhh
Q 043945          188 LSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEEEE  267 (518)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  267 (518)
                      .+......++.+.+.........+...|...+.+..+++.+..++..++.+.+.+++.++|+++++........  +...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~--~~~~  276 (500)
T PLN02169        199 LSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAET--EPYS  276 (500)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cCCC
Confidence            43222234566665555544444444453333344455555667788999999999999999887643211000  0123


Q ss_pred             hhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhh
Q 043945          268 FDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMVMQ  347 (518)
Q Consensus       268 ~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  347 (518)
                      .|+++.+++....+.....       .+++++|.+++..+++||+|||+++++|++|+|++||++|+|+++||++++   
T Consensus       277 ~d~l~~ll~~~~~~~~~~~-------~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~---  346 (500)
T PLN02169        277 KDALTYYMNVDTSKYKLLK-------PKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF---  346 (500)
T ss_pred             cCHHHHHHhcccccccccc-------CCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC---
Confidence            6899999876421111001       278899999999999999999999999999999999999999999997653   


Q ss_pred             cccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccccC
Q 043945          348 KQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEIWG  427 (518)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  427 (518)
                                     +++++.+||||+|||+||||++|++|...|+++.++++++||.|||||.|.+++|++||||++||
T Consensus       347 ---------------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~  411 (500)
T PLN02169        347 ---------------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWG  411 (500)
T ss_pred             ---------------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccC
Confidence                           56899999999999999999999999999999888888899999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecCCC
Q 043945          428 KDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMKYG  507 (518)
Q Consensus       428 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (518)
                      +||++|+||||+++++.......+.|+|||+|+|+|+|++||++|+++++++|+++|+++++++.++......+++|+++
T Consensus       412 ~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~g  491 (500)
T PLN02169        412 EDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHG  491 (500)
T ss_pred             CChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCC
Confidence            89999999999976443222236789999999999999999999999999999999999998766665566688899999


Q ss_pred             eeEEEeec
Q 043945          508 LKVQLSKR  515 (518)
Q Consensus       508 ~~v~~~~r  515 (518)
                      +++++++|
T Consensus       492 l~l~l~~~  499 (500)
T PLN02169        492 LKVTVTKK  499 (500)
T ss_pred             EEEEEEeC
Confidence            99999987


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.6e-75  Score=554.02  Aligned_cols=449  Identities=21%  Similarity=0.310  Sum_probs=347.3

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCc--chhhcc-cccC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGP--DLRMIL-EPFG  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~--~~~~~~-~~~g  105 (518)
                      |++||+..+...... .....+...++|+++.+   +.+.+|.++|+|||.+|+|+.++.++|..+.  .+..-. ++..
T Consensus        40 p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~---y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~~l~~  115 (499)
T KOG0158|consen   40 PFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGI---YEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPEDPLSA  115 (499)
T ss_pred             CcEecHHHHHhccCc-HHHHHHHHhcCCCEEEE---EecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCCcccc
Confidence            899999999765433 44444444455999999   8899999999999999999999999998843  332222 2334


Q ss_pred             CceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCC
Q 043945          106 DGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINP  185 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  185 (518)
                      .++|+.+|+.|+++|..++|+|++.+++.+.+ ++.+. .+.+.+.+++....+..+++.+.+..++.|+|+++.||.+.
T Consensus       116 ~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~-t~~~~-~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~  193 (499)
T KOG0158|consen  116 LNLFFLRGERWKRLRTKLSPTFTSGKLKKMFP-TMEEV-GDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDA  193 (499)
T ss_pred             cCchhccCchHHHHHHhhccccchhhHHHHHH-HHHHH-HHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccch
Confidence            77899999999999999999999999999766 55555 78888988875544468899999999999999999999998


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHhh---cC-hhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043945          186 NYLSFEFPQVAYANAFNATEQAVFYRHI---VP-KSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKA  261 (518)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  261 (518)
                      ++..+  ...++................   .. ..++.+.+.+  .......+..+.+.+.+...++.|.++.      
T Consensus       194 ~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~~~------  263 (499)
T KOG0158|consen  194 NSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREKEN------  263 (499)
T ss_pred             hhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHhcC------
Confidence            87663  344455433333322100000   00 0011121111  1112224445555666666666662221      


Q ss_pred             CCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 043945          262 STEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMK  341 (518)
Q Consensus       262 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  341 (518)
                         ....|+++.+++...++..  +...  ...+|.+||+++++.+++||.||||++|++++|+||+||++|+|||+||+
T Consensus       264 ---~~r~Dfi~lll~~~~~~~~--~~~~--~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~  336 (499)
T KOG0158|consen  264 ---IERNDFIDLLLDARASDFA--KSKS--HKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEID  336 (499)
T ss_pred             ---CCCchHHHHHHHhhccccc--cccc--ccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence               5788999999988754100  0000  00399999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecC-ceeeCCCCeEEEehhhhc
Q 043945          342 ANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPS-GHRINKNHSILISYYAMG  420 (518)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~-g~~ip~Gt~v~~~~~~~~  420 (518)
                      +++.           +.+ .+|+|.+.+|+||++||+||||+||+++...|++.++..+ . |+.||||+.|.++++++|
T Consensus       337 ~~~~-----------~~~-~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i-~~~~~i~kG~~V~Ip~~alH  403 (499)
T KOG0158|consen  337 EVLE-----------EKE-GLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEI-PGGFVIPKGTPVMIPTYALH  403 (499)
T ss_pred             HHhc-----------ccC-CCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceec-CCCeEeCCCCEEEeeccccc
Confidence            9975           222 3999999999999999999999999999977777665555 6 999999999999999999


Q ss_pred             cCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCcc--
Q 043945          421 RMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCN--  498 (518)
Q Consensus       421 ~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~--  498 (518)
                      |||++| |||++|+||||.+++.+  ...+.+|+|||.|||+|+|.+||.+|+|+.|++||++|+++.++........  
T Consensus       404 ~Dp~~~-p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~  480 (499)
T KOG0158|consen  404 HDPEYW-PEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDP  480 (499)
T ss_pred             CCcccC-CCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCc
Confidence            999999 99999999999987543  3467789999999999999999999999999999999999998832222334  


Q ss_pred             -ceeeecCCCeeEEEeecc
Q 043945          499 -SMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       499 -~~~~~~~~~~~v~~~~r~  516 (518)
                       ++++.|++++++++++|.
T Consensus       481 ~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  481 KGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cceeeecCCceEEEEEeCC
Confidence             678999999999999984


No 3  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.4e-74  Score=559.92  Aligned_cols=443  Identities=23%  Similarity=0.340  Sum_probs=357.7

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchh-hcc--cccC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-MIL--EPFG  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~-~~~--~~~g  105 (518)
                      |+|||++++...  .+|+.+.+++++|||+|.+   |+|..|+|+|+|++.++|++.+++..|+.++... ...  ...+
T Consensus        35 PiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl---~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~  109 (489)
T KOG0156|consen   35 PIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTL---RLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGG  109 (489)
T ss_pred             CccccHHHcCCC--chhHHHHHHHHHhCCeEEE---EecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCC
Confidence            999999999654  5899999999999999999   9999999999999999999999989999988621 212  2234


Q ss_pred             Cceeec-CChhHHHhhhhccc-CCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCC
Q 043945          106 DGVFAA-DGNLWKMQRKMIHS-VMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGI  183 (518)
Q Consensus       106 ~~l~~~-~g~~w~~~R~~l~~-~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~  183 (518)
                      .++.++ +|+.|+.+||+... .++....++....- .++ .+.+++.+.+ ...+++||+...+...+.+++++++||.
T Consensus       110 ~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R-~~E-~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~fG~  186 (489)
T KOG0156|consen  110 KGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIR-EEE-VDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRMLFGR  186 (489)
T ss_pred             CceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHH-HHH-HHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHHhCC
Confidence            677666 89999999999776 56777777764422 333 5667777766 2223799999999999999999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHH---HhhcChhhHHHHHHhcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043945          184 NPNYLSFEFPQVAYANAFNATEQAVFY---RHIVPKSWWKLQKWLHI--GKEKELSKAMKTFDRFLYECISLKRERLLTS  258 (518)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~l~~--~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  258 (518)
                      +++..+. ....++.+.+.+.......   ..++|.    ++++++.  +..+++.....++..++++.|+++++.. ..
T Consensus       187 rf~~~~~-~~~~~~~~l~~~~~~~~~~~~~~d~~p~----~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~  260 (489)
T KOG0156|consen  187 RFEEEDE-EEFLELKELVEESLELLGSFNLSDYFPF----LLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD  260 (489)
T ss_pred             ccccCCc-hHHHHHHHHHHHHHHHhCCccHHHHhhH----HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence            9976421 1223355555555544432   222221    3445542  3456666667779999999999998876 11


Q ss_pred             hccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHH
Q 043945          259 RKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILE  338 (518)
Q Consensus       259 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~  338 (518)
                       +    +. .|+++.|++..+++...         .+++++|...+.++++||+|||++++.|++.+|++||++|+|+++
T Consensus       261 -~----~~-~D~vD~lL~~~~~~~~~---------~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qe  325 (489)
T KOG0156|consen  261 -E----EG-RDFVDALLKLMKEEKAE---------GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQE  325 (489)
T ss_pred             -C----CC-CcHHHHHHHhhcccccC---------CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence             1    22 89999999886433221         189999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhh
Q 043945          339 EMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYA  418 (518)
Q Consensus       339 Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~  418 (518)
                      ||++++|            .++.++.+|+.+||||+|+|+|++|++|++|+..+|.+.+|+.++||.|||||.|+++.|+
T Consensus       326 EId~vvG------------~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~a  393 (489)
T KOG0156|consen  326 EIDEVVG------------KGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWA  393 (489)
T ss_pred             HHHHHhC------------CCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehh
Confidence            9999997            4555999999999999999999999999999999899988988899999999999999999


Q ss_pred             hccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC-CCCCc
Q 043945          419 MGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH-PVSPC  497 (518)
Q Consensus       419 ~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~  497 (518)
                      +||||++| +||++|+||||++++ +.. .....++|||.|+|+|||..+|.+++.+++++|+++|++++.++. ++.+.
T Consensus       394 i~rDp~vw-~dP~eF~PERFl~~~-d~~-~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~  470 (489)
T KOG0156|consen  394 IHRDPKVW-EDPEEFKPERFLDSN-DGK-GLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA  470 (489)
T ss_pred             hhcCCccC-CCccccChhhhcCCc-ccc-CCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc
Confidence            99999999 999999999999974 111 256689999999999999999999999999999999999999772 33334


Q ss_pred             cceeeecCCCeeEEEeecc
Q 043945          498 NSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (518)
                      . .++..+.++.+...+|.
T Consensus       471 ~-~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  471 G-LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             c-cceecCCcceeeeecCC
Confidence            3 66666778888777764


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=7.4e-74  Score=568.77  Aligned_cols=452  Identities=31%  Similarity=0.529  Sum_probs=372.0

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccCCc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGDG  107 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g~~  107 (518)
                      |++|+++.+.+...++..++.++..+||++|..   |+|+.+.++++||+.+++|+......+.+.+.+.... .+.|+|
T Consensus        44 P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG~g  120 (497)
T KOG0157|consen   44 PLIGNLLEFLKPLEEILDFVTELLSRYGPIFKT---WLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWLGDG  120 (497)
T ss_pred             CcccchHHhhcchhHHHHHHHHHHHHcCchhhh---hhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHhcCc
Confidence            999999999654356788999999999999999   9999999999999999999976667788888877444 888999


Q ss_pred             eeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCC
Q 043945          108 VFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNY  187 (518)
Q Consensus       108 l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~  187 (518)
                      +++.+|+.|+++||+++++|+...+++++...++..  ..+...++.. ..++.+|+.+.+.++++|+++..+||.... 
T Consensus       121 ll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~--~~~~~~~~~~-~~~~~vd~~~~~~~~tld~i~~~~~G~~~~-  196 (497)
T KOG0157|consen  121 LLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESS--LILLLLLELA-ASGEEVDLQDLLKRLTLDIICKTAMGPESL-  196 (497)
T ss_pred             cccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHH--HHHHHHHHHh-hcCCeEcHHHHHHHHHHHHHHHHhcCCccc-
Confidence            999999999999999999999999999887665544  3334444432 233349999999999999999999992221 


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCchhh
Q 043945          188 LSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEEEE  267 (518)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  267 (518)
                      ........++.+++..+...+..+...|. .......  .+..++..++.+.+.++++++|++|++....+.... ....
T Consensus       197 ~~~~~~~~~~~~a~~~~~~~~~~~~~~p~-~~~~~~~--~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~-~~~~  272 (497)
T KOG0157|consen  197 DAEGPELFEYVQAFDDLTELISKRINLPL-GTKFLYG--LKSERKLKKARKILHDFLEKIIRERREELEKEGSGE-EKKR  272 (497)
T ss_pred             cccCCcccHHHHHHHHHHHHHHHHHcCch-hhhHHhh--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchh
Confidence            11222456889999988888888777773 2222222  236788999999999999999999998765432111 1346


Q ss_pred             hhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhh
Q 043945          268 FDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMVMQ  347 (518)
Q Consensus       268 ~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  347 (518)
                      .|+++.+.....  .           .+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++|++++++  
T Consensus       273 ~d~L~~~~~~~~--~-----------~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~--  337 (497)
T KOG0157|consen  273 LDFLDTLLLEED--K-----------PLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILG--  337 (497)
T ss_pred             hhHHHHHHHhcc--C-----------CCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhC--
Confidence            678875333221  1           2999999999999999999999999999999999999999999999999996  


Q ss_pred             cccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccccC
Q 043945          348 KQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEIWG  427 (518)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  427 (518)
                               +.+...+..+..+|+||++||+|||||+||+|...|++.+++.+.+||.||||+.|.+++|.+||||.+||
T Consensus       338 ---------~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~  408 (497)
T KOG0157|consen  338 ---------NRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWG  408 (497)
T ss_pred             ---------CCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccC
Confidence                     12222333333479999999999999999999999988887777679999999999999999999999997


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecCCC
Q 043945          428 KDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMKYG  507 (518)
Q Consensus       428 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (518)
                      +||++|+||||++++... ..++++|+|||+|+|.|+|++||++|+|+++++++++|++++..+.........+++|..+
T Consensus       409 ~dp~~F~PeRf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~g  487 (497)
T KOG0157|consen  409 EDPEEFDPERFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNG  487 (497)
T ss_pred             CChhhcCccccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCC
Confidence            799999999999764322 3457899999999999999999999999999999999999998876577888899999999


Q ss_pred             eeEEEeecc
Q 043945          508 LKVQLSKRT  516 (518)
Q Consensus       508 ~~v~~~~r~  516 (518)
                      ++|++++|.
T Consensus       488 l~v~~~~r~  496 (497)
T KOG0157|consen  488 LKVKLRPRG  496 (497)
T ss_pred             eEEEEEeCC
Confidence            999999996


No 5  
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.8e-72  Score=566.95  Aligned_cols=466  Identities=35%  Similarity=0.594  Sum_probs=354.6

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhc---CCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-ccc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKS---RGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPF  104 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~  104 (518)
                      |++||++.+...    +..+.++.++|   |++|.+   ++|+.+.++++||+.+++|+.++...|++...+.... ...
T Consensus        39 p~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~  111 (516)
T PLN03195         39 PIIGAALEQLKN----YDRMHDWLVEYLSKDRTVVV---KMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLL  111 (516)
T ss_pred             CeecchHHHHhc----cchHHHHHHHHhccCCcEEE---eeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHHh
Confidence            999999876543    22345555666   799999   8999999999999999999987656688776543333 345


Q ss_pred             CCceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          105 GDGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       105 g~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      |.+++..+|+.|+++||+++++|+..+++.+.+.++.+. .+.+.+.+++....++++|+.++++.+++|+++.++||.+
T Consensus       112 g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  190 (516)
T PLN03195        112 GDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREY-SLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVE  190 (516)
T ss_pred             cCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCC
Confidence            788988999999999999999999999988765444544 5677777765434566899999999999999999999999


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCc
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTE  264 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  264 (518)
                      ++..+.+.....+.+.+.............|  ++.+..+++....+.+.++.+.+.+++.+.++++++....+... .+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~  267 (516)
T PLN03195        191 IGTLSPSLPENPFAQAFDTANIIVTLRFIDP--LWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS-GK  267 (516)
T ss_pred             ccccccCCCccHHHHHHHHHHHHHHHHHhcc--hhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cc
Confidence            8765432223345555554433222222222  22222333323334556778889999999999887654321100 01


Q ss_pred             hhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 043945          265 EEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANM  344 (518)
Q Consensus       265 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  344 (518)
                      ....|+++.+++...+++.          .++++++.++++.+++||+|||+++++|++|+|++||++|+||++|++++.
T Consensus       268 ~~~~d~l~~ll~~~~~~~~----------~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~  337 (516)
T PLN03195        268 KVKHDILSRFIELGEDPDS----------NFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALE  337 (516)
T ss_pred             cccccHHHHHHhccCCCCC----------CCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence            2356899999975422111          289999999999999999999999999999999999999999999999987


Q ss_pred             hhhcccccccc--------cccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEeh
Q 043945          345 VMQKQEEEEDD--------GEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISY  416 (518)
Q Consensus       345 ~~~~~~~~~~~--------~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~  416 (518)
                      +........++        .+.+..++++++.+||||+|||+|+||++|+++...|++..++++++||.|||||.|.+++
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~  417 (516)
T PLN03195        338 KERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP  417 (516)
T ss_pred             hcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEeh
Confidence            41100000000        0013458999999999999999999999999999988888877877999999999999999


Q ss_pred             hhhccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCC
Q 043945          417 YAMGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSP  496 (518)
Q Consensus       417 ~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~  496 (518)
                      |.+||||++||+||++|+||||++++. ......+.|+|||+|+|+|+|+++|++|++++++.++++|+++++++.+...
T Consensus       418 ~~~h~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  496 (516)
T PLN03195        418 YSMGRMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY  496 (516)
T ss_pred             HhhccChhhhccChhhcCCcccCCCCC-cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee
Confidence            999999999999999999999996432 1112445799999999999999999999999999999999999987655544


Q ss_pred             ccceeeecCCCeeEEEeecc
Q 043945          497 CNSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       497 ~~~~~~~~~~~~~v~~~~r~  516 (518)
                      ....++.|+.+++|++++|.
T Consensus       497 ~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        497 RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeEEecCCCEEEEEEeCC
Confidence            44556789999999999984


No 6  
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.8e-72  Score=522.25  Aligned_cols=446  Identities=21%  Similarity=0.364  Sum_probs=377.9

Q ss_pred             chhhhhHHhhh-cccchHHHHHHHHHhcCCeEEEeccc-cCCccEEEEcChhhHHHhhhcCCCCCCCCc-chhhcc---c
Q 043945           29 SRTRMLSTLVL-NTHQLHEFATRVLKKSRGTLEFKGPW-FAKMDFIITSDPMNVHYISSKNFSNYPKGP-DLRMIL---E  102 (518)
Q Consensus        29 P~iG~~~~~~~-~~~~~~~~~~~~~~~yG~v~~~~~p~-~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~-~~~~~~---~  102 (518)
                      |++|.+..+.+ ...+.|+....++++||+||+.   . +|+.+.|++.||+.++.+++.+ +.++-++ .+....   +
T Consensus        59 ~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~---~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w~~~rd  134 (519)
T KOG0159|consen   59 PFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFRE---GMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPWVAYRD  134 (519)
T ss_pred             cHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeee---ccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchhhhhHH
Confidence            88888886433 2456899999999999999998   5 7899999999999999999987 6677775 222211   2


Q ss_pred             cc--CCceeecCChhHHHhhhhcccC-CChhhHHHHHHHHHHHHHHhcHHHHhhhhcc---CCceechHHHHHHHHHHHH
Q 043945          103 PF--GDGVFAADGNLWKMQRKMIHSV-MKHKKFESALEKTIYQKLENGLIPVLDHASE---VGIKVDLQDVFQRFTFDNI  176 (518)
Q Consensus       103 ~~--g~~l~~~~g~~w~~~R~~l~~~-f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~~~~~  176 (518)
                      .+  ..|++..+|++|.+.|..+++. +.++..+.++++ + +.|.+.++..+++...   ...+.|+...+.+++++++
T Consensus       135 ~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~-l-~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi  212 (519)
T KOG0159|consen  135 FRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQ-L-NAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESI  212 (519)
T ss_pred             hhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhH-H-HHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence            23  2689999999999999999995 578888888763 4 3457888888876543   3457899999999999999


Q ss_pred             HHHHhCCCCCCCCCC--CCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 043945          177 CMSVLGINPNYLSFE--FPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRER  254 (518)
Q Consensus       177 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  254 (518)
                      |.++||.+++++...  .....+.+++..++.........|    +++++++++.++++.++.+.+.++..+.|+.+.++
T Consensus       213 ~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p----~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~  288 (519)
T KOG0159|consen  213 CLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP----SLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEE  288 (519)
T ss_pred             HHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc----hHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987643  234668888888888877766666    67788889999999999999999999999999988


Q ss_pred             HHhhhccCCchhhhhH-HHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHH
Q 043945          255 LLTSRKASTEEEEFDV-LTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVE  333 (518)
Q Consensus       255 ~~~~~~~~~~~~~~d~-l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q  333 (518)
                      .+.+.+..  ...... +..|.+..                ++.+++..+++++++||.|||+.++.|+||+|++||++|
T Consensus       289 l~~~~~~~--~~~~~~l~~~L~~~~----------------l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q  350 (519)
T KOG0159|consen  289 LEKQDSAG--SEYTGSLLELLLRKE----------------LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQ  350 (519)
T ss_pred             HHhccccc--cchhHHHHHHHHHcc----------------CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHH
Confidence            76543211  122333 44444433                899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEE
Q 043945          334 NKILEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSIL  413 (518)
Q Consensus       334 ~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~  413 (518)
                      ++|++|+..+.+           .++..++.+++.+||||+||||||+||+|.+++..|... +|..++||.|||||.|.
T Consensus       351 ~~L~~Ei~~~~p-----------~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~-~D~vL~gY~vPagT~V~  418 (519)
T KOG0159|consen  351 QRLREEILAVLP-----------SGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLP-KDLVLSGYHVPAGTLVV  418 (519)
T ss_pred             HHHHHHHHhhCC-----------CcccccchHHHhhCHHHHHHHHhhhceeccccccccccc-hhceeccceecCCCeEE
Confidence            999999999996           346789999999999999999999999999998886554 46666999999999999


Q ss_pred             EehhhhccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC
Q 043945          414 ISYYAMGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP  493 (518)
Q Consensus       414 ~~~~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  493 (518)
                      ++++.+.+||++| ++|++|+||||++++.  ...+...++|||.|+|+|+||++|++|+.+.||+++++|+++..++.+
T Consensus       419 l~~~~~~r~~~~F-~~p~~F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p  495 (519)
T KOG0159|consen  419 LFLYVLGRNPAYF-PDPEEFLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP  495 (519)
T ss_pred             EeehhhccChhhC-CCccccChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC
Confidence            9999999999999 9999999999998853  335788999999999999999999999999999999999999999889


Q ss_pred             CCCccceeeecCCCeeEEEeeccC
Q 043945          494 VSPCNSMVLHMKYGLKVQLSKRTI  517 (518)
Q Consensus       494 ~~~~~~~~~~~~~~~~v~~~~r~~  517 (518)
                      ++....+++.|..++.++|++|.+
T Consensus       496 v~~~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  496 VEYVYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             ccceeEEEEcCCCCcceeeeeCCC
Confidence            999999999999999999999975


No 7  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=6.6e-72  Score=564.90  Aligned_cols=454  Identities=18%  Similarity=0.257  Sum_probs=342.5

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcC-CeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccCC-
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGD-  106 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g~-  106 (518)
                      |++||++++.... ..+.++.++.++|| ++|.+   ++|++++|+|+||+.+++++.+++..|.+++.... ....+. 
T Consensus        66 PiiGnl~~l~~~~-~~~~~l~~~~~~yg~~i~~~---~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~-~~~l~~~  140 (543)
T PLN02971         66 PIVGMIPAMLKNR-PVFRWLHSLMKELNTEIACV---RLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA-QKILSNG  140 (543)
T ss_pred             CcccchHHhccCC-cHhHHHHHHHHHhCCceEEE---EcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc-hhhccCC
Confidence            8999999885432 25788999999999 79999   99999999999999999999988777888764321 222333 


Q ss_pred             ---ceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCC
Q 043945          107 ---GVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGI  183 (518)
Q Consensus       107 ---~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~  183 (518)
                         +++..+|+.|+++||++++.+........+...+.++ .+.+.+.+.+....++++|+.+.+.++++++++.++||.
T Consensus       141 ~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~  219 (543)
T PLN02971        141 YKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEE-TDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGT  219 (543)
T ss_pred             CCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhCC
Confidence               3777889999999999986554443333344455554 677777776544455689999999999999999999999


Q ss_pred             CCCCCCC---CCCchHHHHHHHHHHHHHHHHhh-cChhhHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043945          184 NPNYLSF---EFPQVAYANAFNATEQAVFYRHI-VPKSWWKLQKWLHI-GKEKELSKAMKTFDRFLYECISLKRERLLTS  258 (518)
Q Consensus       184 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  258 (518)
                      ++...+.   +....++.+.+..++........ .+..+++.+++++. +..+...++.+.+.+++.++|+++++..+.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  299 (543)
T PLN02971        220 RTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREG  299 (543)
T ss_pred             cccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            8743210   11122333444444432211111 11112223333332 2234455667788999999998887644322


Q ss_pred             hccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHH
Q 043945          259 RKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILE  338 (518)
Q Consensus       259 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~  338 (518)
                      ..    ....|+++.|++...+++.         ..+++++|.+++..+++||+|||+++++|++++|++||++|+|+++
T Consensus       300 ~~----~~~~d~l~~ll~~~~~~~~---------~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        300 KR----TQIEDFLDIFISIKDEAGQ---------PLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             CC----CCCcCHHHHHHhhhcccCC---------CCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            10    1246899999975422111         0289999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhh
Q 043945          339 EMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYA  418 (518)
Q Consensus       339 Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~  418 (518)
                      ||+++++            .++.++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+++.|+
T Consensus       367 EI~~v~g------------~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~  434 (543)
T PLN02971        367 EIDRVVG------------KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYG  434 (543)
T ss_pred             HHHHHhC------------CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHH
Confidence            9999986            3567899999999999999999999999999877777777787899999999999999999


Q ss_pred             hccCccccCCCCCCCCCCCCCCCCCCc-cccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC-CC--
Q 043945          419 MGRMEEIWGKDCLEFKPERWISERGSI-VHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH-PV--  494 (518)
Q Consensus       419 ~~~d~~~~g~~p~~F~PeRfl~~~~~~-~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~--  494 (518)
                      +||||++| +||++|+||||++++++. .......|+|||.|+|+|+|+++|++|+++++|+|+++|+|++.++. ..  
T Consensus       435 ~~~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  513 (543)
T PLN02971        435 LGRNPKVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVEL  513 (543)
T ss_pred             hcCChhhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcch
Confidence            99999999 999999999999754321 11245679999999999999999999999999999999999987643 22  


Q ss_pred             CCccceeeecCCCeeEEEeec
Q 043945          495 SPCNSMVLHMKYGLKVQLSKR  515 (518)
Q Consensus       495 ~~~~~~~~~~~~~~~v~~~~r  515 (518)
                      .+..+ ++..++++.+.+.+|
T Consensus       514 ~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        514 MESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             hhhcC-cccccccceeeeeec
Confidence            22333 453455899999988


No 8  
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.6e-71  Score=552.29  Aligned_cols=444  Identities=36%  Similarity=0.657  Sum_probs=356.9

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcC-CeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccCC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGD  106 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g~  106 (518)
                      ++.|+....+.+   .++++.++.++++ ..+++   +.++.  ++++||+.+++|+..+.+.|+|+..+.... ...|+
T Consensus        50 ~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~  121 (502)
T PLN02426         50 YLTASWAKDFDN---LCDWYAHLLRRSPTGTIHV---HVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGR  121 (502)
T ss_pred             CccHHHHHhccc---HHHHHHHHHHhCCCcEEEE---ecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCC
Confidence            678887665433   5777878888888 47776   43343  899999999999988767898887665433 56689


Q ss_pred             ceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhcc--CCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          107 GVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASE--VGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       107 ~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      |+++.+|+.|+++||.++++|+..+++.+....+.+++.+.+.+.+++..+  .+.++|+.++++.+++|+++.++||.+
T Consensus       122 gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        122 GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999988765333333446777777765432  246799999999999999999999999


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHhhcC-hhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFYRHIVP-KSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKAST  263 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  263 (518)
                      ++..+.+....++.+++..+..........+ .+++.+.++++.+..++..++.+.+.+++.++|+++++...       
T Consensus       202 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-------  274 (502)
T PLN02426        202 PGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-------  274 (502)
T ss_pred             CcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence            8766543334567777766544333222221 24455555665555677888899999999999999876421       


Q ss_pred             chhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 043945          264 EEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKAN  343 (518)
Q Consensus       264 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  343 (518)
                       ....|+++.+++..                .+++++.+++..+++||+|||+++++|++|+|++||++|+||++|++++
T Consensus       275 -~~~~dll~~ll~~~----------------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~  337 (502)
T PLN02426        275 -SASKDLLSRFMASI----------------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRV  337 (502)
T ss_pred             -CCcchHHHHHHhcC----------------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence             23468999999765                5678899999999999999999999999999999999999999999998


Q ss_pred             hhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCc
Q 043945          344 MVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRME  423 (518)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~  423 (518)
                      .+           .....++++++.+||||+|||+|+||++||++...|++.+++++++||.|||||.|.+++|.+||||
T Consensus       338 ~~-----------~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~  406 (502)
T PLN02426        338 MG-----------PNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRME  406 (502)
T ss_pred             hC-----------CCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCc
Confidence            85           2234689999999999999999999999999998877777777779999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC--CCCcccee
Q 043945          424 EIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP--VSPCNSMV  501 (518)
Q Consensus       424 ~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~  501 (518)
                      ++|||||++|+||||++++ +......+.|+|||+|+|.|+|+++|.+|++++++.|+++|+++++++.+  .....+.+
T Consensus       407 ~~~G~dp~~F~PeRwl~~~-~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  485 (502)
T PLN02426        407 RIWGPDCLEFKPERWLKNG-VFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLT  485 (502)
T ss_pred             cccCcChhhcCccccCCCC-CcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeE
Confidence            9999999999999999742 11112446799999999999999999999999999999999999975432  24455678


Q ss_pred             eecCCCeeEEEeecc
Q 043945          502 LHMKYGLKVQLSKRT  516 (518)
Q Consensus       502 ~~~~~~~~v~~~~r~  516 (518)
                      +.|+++++|++++|.
T Consensus       486 ~~~~~gl~v~~~~r~  500 (502)
T PLN02426        486 ATVRGGLPVRVRERV  500 (502)
T ss_pred             EecCCCEEEEEEEcc
Confidence            899999999999985


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.2e-70  Score=553.60  Aligned_cols=446  Identities=21%  Similarity=0.310  Sum_probs=345.6

Q ss_pred             chhhhhHHhhhc----------------ccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCC
Q 043945           29 SRTRMLSTLVLN----------------THQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYP   92 (518)
Q Consensus        29 P~iG~~~~~~~~----------------~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~   92 (518)
                      |++||++.+...                ..+....+.+|+++||++|.+   |+|+.++|+++||+.+++++.++ ..+.
T Consensus        51 P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~v~~il~~~-~~~~  126 (516)
T PLN02290         51 PLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIY---WNGTEPRLCLTETELIKELLTKY-NTVT  126 (516)
T ss_pred             cCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEE---ccCCccEEEECCHHHHHHHHhcC-CCCC
Confidence            999999987531                012334568899999999999   99999999999999999999876 4444


Q ss_pred             CCcchhh--cccccCCceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccC-CceechHHHHH
Q 043945           93 KGPDLRM--ILEPFGDGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEV-GIKVDLQDVFQ  169 (518)
Q Consensus        93 ~~~~~~~--~~~~~g~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~-~~~vdl~~~~~  169 (518)
                      .+++...  .....|.++++.+|+.|+++||+++++|+..+++.+.+ .+.++ .+.+++.+.+.... +.++|+.+++.
T Consensus       127 ~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~l~~~~~~~~~~vd~~~~~~  204 (516)
T PLN02290        127 GKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAG-HMVEC-TKQMLQSLQKAVESGQTEVEIGEYMT  204 (516)
T ss_pred             CCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHH-HHHHH-HHHHHHHHHHHHhcCCceEEhHHHHH
Confidence            4443321  12345788999999999999999999999999988765 56666 57777777654333 35899999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Q 043945          170 RFTFDNICMSVLGINPNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECIS  249 (518)
Q Consensus       170 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~  249 (518)
                      .+++|+++.++||.+++..      .++.+.+..+......... . ..++..++++.+..+++.+..+.+.+++.+.|+
T Consensus       205 ~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        205 RLTADIISRTEFDSSYEKG------KQIFHLLTVLQRLCAQATR-H-LCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             HHHHHHHHHHHcCCccccc------hHHHHHHHHHHHHHHHhhh-h-hcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987421      2233333333322211110 0 011233445443445566778889999999999


Q ss_pred             HHHHHHHhhhccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 043945          250 LKRERLLTSRKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATH  329 (518)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  329 (518)
                      ++++..+.+..   +....|+++.++++..+.....       ..++++++.+++..+++||+|||+++++|++++|++|
T Consensus       277 ~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~-------~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        277 SRRDCVEIGRS---SSYGDDLLGMLLNEMEKKRSNG-------FNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHhhcccC---CCCCCCHHHHHHHhccccCCCC-------CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            88765432211   1234689999987643221111       1278999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCC
Q 043945          330 PSVENKILEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKN  409 (518)
Q Consensus       330 p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~G  409 (518)
                      |++|+|+++|++++++            . ..++++++.+||||+|||+||||++|+++.+. |.+.+|+.++||.||||
T Consensus       347 P~vq~kl~~Ei~~v~~------------~-~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IP~G  412 (516)
T PLN02290        347 PTWQDKVRAEVAEVCG------------G-ETPSVDHLSKLTLLNMVINESLRLYPPATLLP-RMAFEDIKLGDLHIPKG  412 (516)
T ss_pred             HHHHHHHHHHHHHHhC------------C-CCCCHHHHhcChHHHHHHHHHHHcCCCccccc-eeecCCeeECCEEECCC
Confidence            9999999999999986            2 37899999999999999999999999999764 55556777799999999


Q ss_pred             CeEEEehhhhccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEee
Q 043945          410 HSILISYYAMGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIV  489 (518)
Q Consensus       410 t~v~~~~~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~  489 (518)
                      |.|.++.|.+||||++||+||++|+||||++.+.    .....|+|||.|+|.|+|+++|++|+++++++|+++|++++.
T Consensus       413 t~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~  488 (516)
T PLN02290        413 LSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTIS  488 (516)
T ss_pred             CEEEecHHHhcCChhhhCCChhhcCccccCCCCC----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeC
Confidence            9999999999999999977999999999995421    133479999999999999999999999999999999999998


Q ss_pred             cCCCCCCccceeeecCCCeeEEEeecc
Q 043945          490 QGHPVSPCNSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (518)
                      ++.........++.|+++++|++++|.
T Consensus       489 ~~~~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        489 DNYRHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             CCcccCccceeeecCCCCCeEEEEeCC
Confidence            764333344678899999999999985


No 10 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.4e-70  Score=553.13  Aligned_cols=450  Identities=18%  Similarity=0.251  Sum_probs=346.1

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc--cccCC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL--EPFGD  106 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~--~~~g~  106 (518)
                      |++||++.+..  .+++.++.+++++||++|++   ++|+.++|+++|||++++++.++...|.+++.+....  ...+.
T Consensus        37 P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~---~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~  111 (499)
T PLN03234         37 PIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTM---KIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGR  111 (499)
T ss_pred             CeeccHHhcCC--CCccHHHHHHHHHcCCeEEE---EecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCC
Confidence            99999988743  23667899999999999999   9999999999999999999988767788877543221  22233


Q ss_pred             ce-eecCChhHHHhhhhc-ccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          107 GV-FAADGNLWKMQRKMI-HSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       107 ~l-~~~~g~~w~~~R~~l-~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .+ +...++.|+++||.+ .+.|+..++..+.+ .+.+. .+.+++.+.+....++++|+.+.+..+++|+++.++||.+
T Consensus       112 ~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~-~i~~~-~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  189 (499)
T PLN03234        112 ELGFGQYTAYYREMRKMCMVNLFSPNRVASFRP-VREEE-CQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKR  189 (499)
T ss_pred             ccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHH-HHHHH-HHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCc
Confidence            33 445688999999985 68999998888654 56665 5777788876555667899999999999999999999998


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLH--IGKEKELSKAMKTFDRFLYECISLKRERLLTSRKAS  262 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  262 (518)
                      ++..+.  ...++.+.+.......... ..+ .+++++.+++  .+..++..++.+.+.+++.++|+++++....+    
T Consensus       190 ~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~-~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----  261 (499)
T PLN03234        190 YNEYGT--EMKRFIDILYETQALLGTL-FFS-DLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK----  261 (499)
T ss_pred             ccccch--hHHHHHHHHHHHHHHcCCC-cHH-HHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC----
Confidence            864321  2234444444433221110 000 1111222111  12346778889999999999999876542211    


Q ss_pred             CchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 043945          263 TEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKA  342 (518)
Q Consensus       263 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  342 (518)
                        ....|+++.+++..+++.. .       ..+++++|.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       262 --~~~~d~l~~l~~~~~~~~~-~-------~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~  331 (499)
T PLN03234        262 --QETESFIDLLMQIYKDQPF-S-------IKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRN  331 (499)
T ss_pred             --CCcccHHHHHHHHhhccCc-C-------CCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence              2346888888865422111 0       12899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccC
Q 043945          343 NMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRM  422 (518)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d  422 (518)
                      +++            +...++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++++.+|||
T Consensus       332 ~~~------------~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd  399 (499)
T PLN03234        332 VIG------------DKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRD  399 (499)
T ss_pred             HhC------------CCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCC
Confidence            986            34568999999999999999999999999998765666667777999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCC-ccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC---CC--CC
Q 043945          423 EEIWGKDCLEFKPERWISERGS-IVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH---PV--SP  496 (518)
Q Consensus       423 ~~~~g~~p~~F~PeRfl~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~--~~  496 (518)
                      |++||+||++|+||||+++.+. ........|+|||+|+|+|+|+++|++|+++++|+|+++|+|++.++.   ++  ..
T Consensus       400 ~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  479 (499)
T PLN03234        400 TAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDV  479 (499)
T ss_pred             cccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccc
Confidence            9999889999999999976432 112245679999999999999999999999999999999999998752   22  33


Q ss_pred             ccceeeecCCCeeEEEeec
Q 043945          497 CNSMVLHMKYGLKVQLSKR  515 (518)
Q Consensus       497 ~~~~~~~~~~~~~v~~~~r  515 (518)
                      ..+....|++.+.+.+++|
T Consensus       480 ~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        480 MTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             ccccccccCCCeEEEeecC
Confidence            4455667777777777776


No 11 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.7e-70  Score=552.00  Aligned_cols=449  Identities=24%  Similarity=0.405  Sum_probs=350.4

Q ss_pred             hhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccCCcee
Q 043945           30 RTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGDGVF  109 (518)
Q Consensus        30 ~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~l~  109 (518)
                      .+||+..+.  ..+++..+.+++++|||||++   ++|+.++++|+||+.+++|+..+...|.+++.+.......+.+++
T Consensus       141 ~~G~l~~i~--~g~~~~~l~~lh~kYGpI~ri---~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~  215 (633)
T PLN02738        141 AKGSISAVR--GEAFFIPLYELFLTYGGIFRL---TFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLI  215 (633)
T ss_pred             ccCcHHHhc--CchHHHHHHHHHHHhCCEEEE---EeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCcee
Confidence            567766663  345788999999999999999   889999999999999999998776678887554322234567888


Q ss_pred             ecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCCCC
Q 043945          110 AADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNYLS  189 (518)
Q Consensus       110 ~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~  189 (518)
                      ..+|+.|+.+|+.++++|+..++..+. +.+.+. .+.+++.+++....++++|+...+..+++|+++.++||.+++...
T Consensus       216 ~~dge~wr~rRr~l~p~Fs~~~v~~l~-~~i~~~-v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~  293 (633)
T PLN02738        216 PADGEIWRVRRRAIVPALHQKYVAAMI-SLFGQA-SDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS  293 (633)
T ss_pred             cCCcHHHHHHHHhccHhhhHHHHHHHH-HHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccc
Confidence            899999999999999999999988764 467666 577888887655567799999999999999999999999987543


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHh--hcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----CC
Q 043945          190 FEFPQVAYANAFNATEQAVFYRH--IVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKA----ST  263 (518)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~----~~  263 (518)
                      .+   ..+.+.+...........  .+|.+..++++.++ ...++..++.+.+.+++..+++.+++..+.....    ..
T Consensus       294 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~  369 (633)
T PLN02738        294 ND---TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS-PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYM  369 (633)
T ss_pred             cc---hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccc
Confidence            22   234444444443322111  12222223333332 1234555666777777777777655432211100    00


Q ss_pred             chhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 043945          264 EEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKAN  343 (518)
Q Consensus       264 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  343 (518)
                      .....|+++.|++..   .           .+++++|.++++.+++||+|||+++|+|++|+|++||++|+||++|++++
T Consensus       370 ~~~~~dil~~Ll~~~---~-----------~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v  435 (633)
T PLN02738        370 NERDPSILHFLLASG---D-----------DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSV  435 (633)
T ss_pred             ccccchHHHHHHHcC---C-----------CCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence            123458899988653   1           18999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCc
Q 043945          344 MVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRME  423 (518)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~  423 (518)
                      ++             +..++++++++||||+|||+|+||++|+++.+.|++.++ ..++||.|||||.|.++.|.+||||
T Consensus       436 ~~-------------~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d-~~i~gy~IPkGT~V~~s~~~ihrdp  501 (633)
T PLN02738        436 LG-------------DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEN-DMLGGYPIKRGEDIFISVWNLHRSP  501 (633)
T ss_pred             cC-------------CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccC-ceECCEEECCCCEEEecHHHHhCCc
Confidence            85             246899999999999999999999999999988777655 4569999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCC-ccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC-CCCcccee
Q 043945          424 EIWGKDCLEFKPERWISERGS-IVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP-VSPCNSMV  501 (518)
Q Consensus       424 ~~~g~~p~~F~PeRfl~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~  501 (518)
                      ++| |||++|+||||+..+.. ........|+|||.|+|+|+|++||++|++++||+|+++|+|++.++.+ +.....++
T Consensus       502 ~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~  580 (633)
T PLN02738        502 KHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGAT  580 (633)
T ss_pred             ccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceE
Confidence            999 99999999999853211 1122456799999999999999999999999999999999999987643 34445678


Q ss_pred             eecCCCeeEEEeeccCC
Q 043945          502 LHMKYGLKVQLSKRTIW  518 (518)
Q Consensus       502 ~~~~~~~~v~~~~r~~~  518 (518)
                      +.|+++++|++++|..|
T Consensus       581 ~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        581 IHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             EeeCCCcEEEEEECCCC
Confidence            88999999999999987


No 12 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.7e-69  Score=541.39  Aligned_cols=453  Identities=21%  Similarity=0.350  Sum_probs=362.0

Q ss_pred             cchhhhhHHhhhcc--cchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC
Q 043945           28 SSRTRMLSTLVLNT--HQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG  105 (518)
Q Consensus        28 ~P~iG~~~~~~~~~--~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g  105 (518)
                      +|++|..+.+....  ..++..+.+++++||++|++   ++|+.+.++++||+++++|+......|.+++.+.......+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~   96 (489)
T PLN02936         20 IPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRL---AAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLFG   96 (489)
T ss_pred             CccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEE---ccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHhc
Confidence            39999999987643  45799999999999999999   88999999999999999999876577887654432223457


Q ss_pred             CceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCC
Q 043945          106 DGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINP  185 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  185 (518)
                      .+++..+|+.|+++||+++++|+..++..+.+..+.+. .+.+++.+++....++++|+.++++.+++++++.++||.++
T Consensus        97 ~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~-~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~  175 (489)
T PLN02936         97 SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKC-AERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYNF  175 (489)
T ss_pred             CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCc
Confidence            88888999999999999999999888877665556555 57788888765555678999999999999999999999998


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHh--hcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--
Q 043945          186 NYLSFEFPQVAYANAFNATEQAVFYRH--IVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKA--  261 (518)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~--  261 (518)
                      +..+.   ..++.+.+...........  .+|.+.++++.++ .+..++..++.+.+.+++.+.++++++..+.....  
T Consensus       176 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~-~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~  251 (489)
T PLN02936        176 DSLTT---DSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKI-SPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIE  251 (489)
T ss_pred             ccccc---CcHHHHHHHHHHHHHHHhhhccchHHhhHHHhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            75432   1335555544433322111  2232211222211 12345677888889999999998877654321110  


Q ss_pred             -C--CchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHH
Q 043945          262 -S--TEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILE  338 (518)
Q Consensus       262 -~--~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~  338 (518)
                       .  ......|+++.|++...              +++.++|.++++.+++||+|||+++++|++|+|++||++|+|+++
T Consensus       252 ~~~~~~~~~~d~l~~ll~~~~--------------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        252 GEEYVNDSDPSVLRFLLASRE--------------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             cccccccCchHHHHHHHhccc--------------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence             0  01234688999886531              188999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhh
Q 043945          339 EMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYA  418 (518)
Q Consensus       339 Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~  418 (518)
                      |++++++            . ..++++++.+||||+|||+||||++|+++...||++.+++.++||.|||||.|+++.+.
T Consensus       318 Ei~~~~~------------~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~  384 (489)
T PLN02936        318 ELDRVLQ------------G-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYN  384 (489)
T ss_pred             HHHHHhc------------C-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHh
Confidence            9999985            1 34789999999999999999999999999999998888888899999999999999999


Q ss_pred             hccCccccCCCCCCCCCCCCCCCCCCc-cccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCc
Q 043945          419 MGRMEEIWGKDCLEFKPERWISERGSI-VHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPC  497 (518)
Q Consensus       419 ~~~d~~~~g~~p~~F~PeRfl~~~~~~-~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~  497 (518)
                      +||||++| +||++|+||||+.++... .......|+|||.|+|.|||+++|++|+++++++|+++|+++++++.++...
T Consensus       385 ~~rd~~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~  463 (489)
T PLN02936        385 IHRSPEVW-ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMT  463 (489)
T ss_pred             ccCChhhC-CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCcccee
Confidence            99999999 999999999999653211 1112457999999999999999999999999999999999999887666555


Q ss_pred             cceeeecCCCeeEEEeecc
Q 043945          498 NSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (518)
                      .++++.|+.+++|++++|.
T Consensus       464 ~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        464 TGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             cceEEeeCCCeEEEEEeee
Confidence            5677888899999999985


No 13 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-69  Score=547.48  Aligned_cols=454  Identities=19%  Similarity=0.249  Sum_probs=345.2

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC--C
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG--D  106 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g--~  106 (518)
                      |++|+++.+......++.++.+++++||++|.+   ++|+.++|+|+||+.+++++.++...|++++.... ....+  .
T Consensus        44 pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~-~~~~~~~~  119 (519)
T PLN00168         44 PLLGSLVWLTNSSADVEPLLRRLIARYGPVVSL---RVGSRLSVFVADRRLAHAALVERGAALADRPAVAS-SRLLGESD  119 (519)
T ss_pred             cccccHHhhccccccHHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcCCccccCCcccc-hhhhccCC
Confidence            899999876433335788999999999999999   99999999999999999999887677877665321 12223  2


Q ss_pred             ceee--cCChhHHHhhh-hcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCC
Q 043945          107 GVFA--ADGNLWKMQRK-MIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGI  183 (518)
Q Consensus       107 ~l~~--~~g~~w~~~R~-~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~  183 (518)
                      +++.  .+|+.|+++|| ++.++|+.++++.+.+ .+.+. .+.+++.+.+....++.+|+.+.+..++.++++.++||.
T Consensus       120 ~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~-~~~~~-~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~  197 (519)
T PLN00168        120 NTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAP-ARAWV-RRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGE  197 (519)
T ss_pred             CceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHH-HHHHH-HHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCC
Confidence            3443  68999999876 7899999999998766 44444 577888887644444578999999999999999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHH----HHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043945          184 NPNYLSFEFPQVAYANAFNATEQAVF----YRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSR  259 (518)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  259 (518)
                      +++..    ....+......+.....    ....+|    .+.+++.....++..++.+.+.+++..+|+++++......
T Consensus       198 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p----~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (519)
T PLN00168        198 RLDEP----AVRAIAAAQRDWLLYVSKKMSVFAFFP----AVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLG  269 (519)
T ss_pred             CcChh----hHHHHHHHHHHHHHHhcCCCCHHHhCc----chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            87521    11122222222211111    111222    1111211122455667888999999999998876432110


Q ss_pred             c-cC-C---chhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHH
Q 043945          260 K-AS-T---EEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVEN  334 (518)
Q Consensus       260 ~-~~-~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~  334 (518)
                      . .. .   .....|+++.|++....+.+  +      ..+++++|.++++.+++||+|||+++++|++++|++||++|+
T Consensus       270 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~--~------~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~  341 (519)
T PLN00168        270 QGGEPPKKETTFEHSYVDTLLDIRLPEDG--D------RALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQS  341 (519)
T ss_pred             ccCccccccccccccHHHHHHhhhccccc--c------CCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHH
Confidence            0 00 0   01145899999875421111  0      129999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEE
Q 043945          335 KILEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILI  414 (518)
Q Consensus       335 ~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~  414 (518)
                      |+++||+++++           .....++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.+
T Consensus       342 kl~~Ei~~v~~-----------~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~  410 (519)
T PLN00168        342 KLHDEIKAKTG-----------DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNF  410 (519)
T ss_pred             HHHHHHHHHhC-----------CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEE
Confidence            99999999985           2235689999999999999999999999999988777777777779999999999999


Q ss_pred             ehhhhccCccccCCCCCCCCCCCCCCCCCC----ccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeec
Q 043945          415 SYYAMGRMEEIWGKDCLEFKPERWISERGS----IVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQ  490 (518)
Q Consensus       415 ~~~~~~~d~~~~g~~p~~F~PeRfl~~~~~----~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~  490 (518)
                      +++++||||++| |||++|+||||++....    ........|+|||+|+|+|||++||.+|+++++++|+++|+|++++
T Consensus       411 ~~~~~~~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  489 (519)
T PLN00168        411 MVAEMGRDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVP  489 (519)
T ss_pred             ChHHHhcCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCC
Confidence            999999999999 99999999999974221    1112345799999999999999999999999999999999999987


Q ss_pred             CCCCCC--ccceeeecCCCeeEEEeecc
Q 043945          491 GHPVSP--CNSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       491 ~~~~~~--~~~~~~~~~~~~~v~~~~r~  516 (518)
                      +.+++.  ...+++.+++++++++++|+
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        490 GDEVDFAEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             CCcCChhhhceeEEeecCCcEEEEEecc
Confidence            654433  23467778889999999996


No 14 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3e-70  Score=548.40  Aligned_cols=439  Identities=21%  Similarity=0.352  Sum_probs=338.2

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccCCc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGDG  107 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g~~  107 (518)
                      |++||+..+..   .++.++.+++++||++|++   ++|+.+.|+++||+.+++++.++.+.|.+++...... ...+++
T Consensus        38 p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~~~  111 (482)
T PTZ00404         38 PILGNLHQLGN---LPHRDLTKMSKKYGGIFRI---WFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTFYHG  111 (482)
T ss_pred             CeeccHhhhcc---cHHHHHHHHHHHhCCeeEE---EecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeeccCCc
Confidence            89999988754   4788999999999999999   8999999999999999999987656676655433222 334788


Q ss_pred             eeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCC
Q 043945          108 VFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNY  187 (518)
Q Consensus       108 l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~  187 (518)
                      ++..+|+.|+++|++++++|+..++..+.+ .+.+. .+.+.+.|++....++.+|+.+++..+++|+++.++||.+.+.
T Consensus       112 l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~  189 (482)
T PTZ00404        112 IVTSSGEYWKRNREIVGKAMRKTNLKHIYD-LLDDQ-VDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNEDISF  189 (482)
T ss_pred             eeccChHHHHHHHHHHHHHHhhhccccHHH-HHHHH-HHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcccccc
Confidence            999999999999999999999999988654 56666 5777777766444566899999999999999999999998764


Q ss_pred             CCCC--CCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Q 043945          188 LSFE--FPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEE  265 (518)
Q Consensus       188 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  265 (518)
                      .++.  ....++.+.+..++.......... ++ .+...+.....+...++.+.+.+++.+.++++++....       .
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~  260 (482)
T PTZ00404        190 DEDIHNGKLAELMGPMEQVFKDLGSGSLFD-VI-EITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP-------E  260 (482)
T ss_pred             ccccchhHHHHHHHHHHHHHHHhCCCchhh-hh-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------C
Confidence            3211  112345555555544322111111 00 01111000111233455667777777777665543211       2


Q ss_pred             hhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          266 EEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       266 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      ...|+++.++++..+..           ....++|.+++..+++||+|||+++++|++++|++||++|+||++|++++++
T Consensus       261 ~~~dll~~ll~~~~~~~-----------~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~  329 (482)
T PTZ00404        261 VPRDLLDLLIKEYGTNT-----------DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN  329 (482)
T ss_pred             CcccHHHHHHHHhccCC-----------cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc
Confidence            34689999997642100           0223458899999999999999999999999999999999999999999986


Q ss_pred             hhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceec-CceeeCCCCeEEEehhhhccCcc
Q 043945          346 MQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLP-SGHRINKNHSILISYYAMGRMEE  424 (518)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~-~g~~ip~Gt~v~~~~~~~~~d~~  424 (518)
                                  ....++++++.+||||+|||+|+||++|+++...+|.+.+|+.+ +||.|||||.|.++.+++||||+
T Consensus       330 ------------~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~  397 (482)
T PTZ00404        330 ------------GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEK  397 (482)
T ss_pred             ------------CCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcc
Confidence                        23467999999999999999999999999997655555567777 99999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCC--CCccceee
Q 043945          425 IWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPV--SPCNSMVL  502 (518)
Q Consensus       425 ~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~  502 (518)
                      +| |||++|+||||++..      ....|+|||+|+|+|+|+++|++|+++++++|+++|+++.+++.+.  ....+.++
T Consensus       398 ~~-~dP~~F~PeRwl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  470 (482)
T PTZ00404        398 YF-ENPEQFDPSRFLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTL  470 (482)
T ss_pred             cc-CCccccCccccCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceee
Confidence            99 999999999998652      3468999999999999999999999999999999999998776543  22345556


Q ss_pred             ecCCCeeEEEeec
Q 043945          503 HMKYGLKVQLSKR  515 (518)
Q Consensus       503 ~~~~~~~v~~~~r  515 (518)
                      . +.+++|++++|
T Consensus       471 ~-~~~~~v~~~~R  482 (482)
T PTZ00404        471 K-PNKFKVLLEKR  482 (482)
T ss_pred             c-CCCceeeeecC
Confidence            6 45799999987


No 15 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.5e-69  Score=546.09  Aligned_cols=452  Identities=20%  Similarity=0.313  Sum_probs=339.9

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccc---cC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP---FG  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~---~g  105 (518)
                      |++|+++.+..   ..+.++.+++++||++|++   ++|+.++|+|+||+++++++.++...|++++........   .+
T Consensus        45 Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~  118 (516)
T PLN02183         45 PIIGNMLMMDQ---LTHRGLANLAKQYGGLFHM---RMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRA  118 (516)
T ss_pred             CeeccHHhcCC---cchHHHHHHHHHhCCeeEE---EeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCC
Confidence            89999987632   2467899999999999999   899999999999999999998876667776543222212   23


Q ss_pred             CceeecCChhHHHhhhh-cccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          106 DGVFAADGNLWKMQRKM-IHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~-l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .+++..+|+.|+++||+ +.++|+..+++.+.+ ++ ++ .+.+++.+.+  ..++++|+.+++..+++|++++++||.+
T Consensus       119 ~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~-~~-~~-~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~~fG~~  193 (516)
T PLN02183        119 DMAFAHYGPFWRQMRKLCVMKLFSRKRAESWAS-VR-DE-VDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRAAFGSS  193 (516)
T ss_pred             ceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHH-HH-HH-HHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhHhhcCc
Confidence            56788899999999998 578999988887643 43 45 4666666653  3367899999999999999999999987


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHH---HHhhcChhhHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVF---YRHIVPKSWWKLQKWLH-IGKEKELSKAMKTFDRFLYECISLKRERLLTSRK  260 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~l~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  260 (518)
                      .+.     ...++.+.+..+.....   ....+|     ++.++. ....++..++.+.+.+++.++|+++++....+..
T Consensus       194 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  263 (516)
T PLN02183        194 SNE-----GQDEFIKILQEFSKLFGAFNVADFIP-----WLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNA  263 (516)
T ss_pred             ccc-----hHHHHHHHHHHHHHHhCCccHHHhcc-----hhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            642     12345555555443321   111222     233332 2234567778888999999999888764332110


Q ss_pred             c-CCchhhhhHHHHHHhcchhhhhhhh-hhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHH
Q 043945          261 A-STEEEEFDVLTAFMVEGEEEEEMNE-DREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILE  338 (518)
Q Consensus       261 ~-~~~~~~~d~l~~ll~~~~~~~~~~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~  338 (518)
                      . ..+....|+++.+++...++....+ ....+...++++++.+++..+++||+|||+++++|++++|++||++|+|+++
T Consensus       264 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  343 (516)
T PLN02183        264 DNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQ  343 (516)
T ss_pred             ccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            0 0012345899999975432110000 0000011389999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhh
Q 043945          339 EMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYA  418 (518)
Q Consensus       339 Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~  418 (518)
                      |++++++            .+..++.+++.+||||+|||+|+||++|++++..|++ .+|+.++||.|||||.|.++.|.
T Consensus       344 Ei~~v~~------------~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~-~~d~~l~g~~IPkGt~V~~~~~~  410 (516)
T PLN02183        344 ELADVVG------------LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHET-AEDAEVAGYFIPKRSRVMINAWA  410 (516)
T ss_pred             HHHHHcC------------CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeec-cCceeECCEEECCCCEEEEehhh
Confidence            9999985            2356899999999999999999999999999987665 45666699999999999999999


Q ss_pred             hccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC---CC
Q 043945          419 MGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP---VS  495 (518)
Q Consensus       419 ~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~  495 (518)
                      +||||++| +||++|+||||++++..........|+|||+|+|+|+|+++|++|+++++|+|+++|++++.++..   ..
T Consensus       411 ~hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~  489 (516)
T PLN02183        411 IGRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELD  489 (516)
T ss_pred             hcCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCC
Confidence            99999999 999999999999754322222456899999999999999999999999999999999999977642   22


Q ss_pred             C--ccceeeecCCCeeEEEeec
Q 043945          496 P--CNSMVLHMKYGLKVQLSKR  515 (518)
Q Consensus       496 ~--~~~~~~~~~~~~~v~~~~r  515 (518)
                      .  ..+.++.+..++.+.+++|
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        490 MNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             hhhccccccccCCCcEEEeecC
Confidence            1  1123333444778888877


No 16 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.7e-69  Score=544.29  Aligned_cols=454  Identities=19%  Similarity=0.281  Sum_probs=350.5

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccc---cC
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP---FG  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~---~g  105 (518)
                      |++||++.+..   +++.++.+++++||++|++   ++|+.++++++||+.+++++.++...|.+++.......+   .+
T Consensus        43 P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~  116 (517)
T PLN02687         43 PVLGNLPQLGP---KPHHTMAALAKTYGPLFRL---RFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQ  116 (517)
T ss_pred             CccccHHhcCC---chhHHHHHHHHHhCCeeEE---ecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCc
Confidence            89999988753   3788999999999999999   999999999999999999998876778877643321111   12


Q ss_pred             CceeecCChhHHHhhhhcc-cCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          106 DGVFAADGNLWKMQRKMIH-SVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~-~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .+++..+|+.|+++||++. ++|+.++++.+.+ .+.++ .+.+++.+++. .+++++|+.++++.+++|+++.++||.+
T Consensus       117 ~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~~-~~~~~vd~~~~~~~~t~dvi~~~~fG~~  193 (517)
T PLN02687        117 DLVFAPYGPRWRALRKICAVHLFSAKALDDFRH-VREEE-VALLVRELARQ-HGTAPVNLGQLVNVCTTNALGRAMVGRR  193 (517)
T ss_pred             eeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHH-HHHHH-HHHHHHHHHHh-cCCCceeHHHHHHHHHHHHHHHHHhCcc
Confidence            3466678999999999998 7999998888654 66666 56777777653 2456899999999999999999999998


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIG-KEKELSKAMKTFDRFLYECISLKRERLLTSRKAST  263 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  263 (518)
                      +...+.+.....+.+.+..+.......  .+..+.+.+++++.. ..++..++.+.+.+++.++++++++..+.+     
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-----  266 (517)
T PLN02687        194 VFAGDGDEKAREFKEMVVELMQLAGVF--NVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG-----  266 (517)
T ss_pred             ccccCCcchHHHHHHHHHHHHHHhccC--cHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----
Confidence            754332223345666555554432111  010112233344322 245667778889999999999887654321     


Q ss_pred             chhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 043945          264 EEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKAN  343 (518)
Q Consensus       264 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  343 (518)
                      +....|+++.+++...+++....     ...++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       267 ~~~~~d~l~~ll~~~~~~~~~~~-----~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  341 (517)
T PLN02687        267 SEEHKDLLSTLLALKREQQADGE-----GGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAV  341 (517)
T ss_pred             CcccccHHHHHHHhhcccccccc-----ccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            02346899999976432110000     0128999999999999999999999999999999999999999999999998


Q ss_pred             hhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCc
Q 043945          344 MVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRME  423 (518)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~  423 (518)
                      .+            .+..++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.+++|.+||||
T Consensus       342 ~~------------~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~  409 (517)
T PLN02687        342 VG------------RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDP  409 (517)
T ss_pred             cC------------CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCc
Confidence            85            345689999999999999999999999999986666667778789999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCc---cccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC---CCC-
Q 043945          424 EIWGKDCLEFKPERWISERGSI---VHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP---VSP-  496 (518)
Q Consensus       424 ~~~g~~p~~F~PeRfl~~~~~~---~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~-  496 (518)
                      ++| +||++|+||||++.+...   .......|+|||+|+|+|+|+++|.+|+++++|+|+++|++++.++..   +.. 
T Consensus       410 ~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  488 (517)
T PLN02687        410 EQW-PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNME  488 (517)
T ss_pred             ccC-CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcc
Confidence            999 999999999999753211   112345799999999999999999999999999999999999987532   222 


Q ss_pred             -ccceeeecCCCeeEEEeecc
Q 043945          497 -CNSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       497 -~~~~~~~~~~~~~v~~~~r~  516 (518)
                       .....+.+..++++++++|.
T Consensus       489 ~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        489 EAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             cccceeeecCCCeEEeeccCC
Confidence             23344556667899988884


No 17 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.4e-69  Score=542.84  Aligned_cols=452  Identities=15%  Similarity=0.173  Sum_probs=328.8

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC---
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG---  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g---  105 (518)
                      |++|+++.+...  ..+..+.+++++||++|++   ++|++++|+|+||+.+++++.++...|.+++.......+.|   
T Consensus        39 p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i---~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~  113 (503)
T PLN02394         39 PIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLL---RMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQ  113 (503)
T ss_pred             CeeeeHHhcCCC--chhHHHHHHHHHhCCeEEE---EcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCC
Confidence            889999887433  3578899999999999999   89999999999999999999876566765542211112222   


Q ss_pred             CceeecCChhHHHhhhhcc-cCCChhhHHHHHHHHHHHHHHhcHHHHhhhhcc-CCceechHHHHHHHHHHHHHHHHhCC
Q 043945          106 DGVFAADGNLWKMQRKMIH-SVMKHKKFESALEKTIYQKLENGLIPVLDHASE-VGIKVDLQDVFQRFTFDNICMSVLGI  183 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~-~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~~~~~~~fG~  183 (518)
                      .+++..+|+.|+++||.+. +.|+.+.+..+.+ .++++ .+.+++.+.+... .++.+|+.+.+..+++|+++.++||.
T Consensus       114 ~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~i~~~-v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~  191 (503)
T PLN02394        114 DMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRY-GWEEE-ADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDR  191 (503)
T ss_pred             ceeecCCCHHHHHHHHHHHHHhcChHHHHHhhH-HHHHH-HHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCC
Confidence            3477788999999999986 8899888877654 55566 4666666654322 24568999999999999999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHH-hhcChhhHHHHHHhcccchHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcc
Q 043945          184 NPNYLSFEFPQVAYANAFNATEQAVFYR-HIVPKSWWKLQKWLHIGKEKELSKAMKTFDR-FLYECISLKRERLLTSRKA  261 (518)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~-~~~~~i~~~~~~~~~~~~~  261 (518)
                      +++..++. ....+.............. .....+++.+...+. ...+........... +....++++++..+....+
T Consensus       192 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (503)
T PLN02394        192 RFESEDDP-LFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLR-GYLKICQDVKERRLALFKDYFVDERKKLMSAKGMD  269 (503)
T ss_pred             Ccccccch-hHHHHHHHHHHHHHHhcccccchhhhchHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence            98653321 1111111111111111000 000011111111111 111122222222222 3344566665433211000


Q ss_pred             CCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 043945          262 STEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMK  341 (518)
Q Consensus       262 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  341 (518)
                        .....|+++.|++...++            .++++++..++..+++||+|||+++++|++|+|++||++|+||++||+
T Consensus       270 --~~~~~d~l~~ll~~~~~~------------~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        270 --KEGLKCAIDHILEAQKKG------------EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             --cchhhhHHHHHHhccccC------------CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence              123568999999765321            189999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhcc
Q 043945          342 ANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGR  421 (518)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~  421 (518)
                      ++.+            .+..++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.+++|.+||
T Consensus       336 ~v~~------------~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~r  403 (503)
T PLN02394        336 TVLG------------PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLAN  403 (503)
T ss_pred             HHhC------------CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhC
Confidence            9985            3456889999999999999999999999999987777766777799999999999999999999


Q ss_pred             CccccCCCCCCCCCCCCCCCCCCc-cccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC-CCC--Cc
Q 043945          422 MEEIWGKDCLEFKPERWISERGSI-VHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH-PVS--PC  497 (518)
Q Consensus       422 d~~~~g~~p~~F~PeRfl~~~~~~-~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~--~~  497 (518)
                      ||++| +||++|+||||+++++.. ......+|+|||+|+|+|+|+++|++|+++++|.++++|++++.++. ++.  +.
T Consensus       404 d~~~~-~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  482 (503)
T PLN02394        404 NPELW-KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEK  482 (503)
T ss_pred             CcccC-CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccc
Confidence            99999 999999999999754321 12245679999999999999999999999999999999999987765 232  23


Q ss_pred             c-ceeeecCCCeeEEEeecc
Q 043945          498 N-SMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       498 ~-~~~~~~~~~~~v~~~~r~  516 (518)
                      . ++.+..+.++.+++.||+
T Consensus       483 ~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        483 GGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             cCceeeccCCCceEEeecCC
Confidence            4 356656668999999996


No 18 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.6e-69  Score=539.99  Aligned_cols=449  Identities=19%  Similarity=0.279  Sum_probs=348.5

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-ccc--C
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPF--G  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~--g  105 (518)
                      |++|+++.+..   .++.++.+++++||++|++   ++|++++|+|+||+.+++++.++...|.+++...... ...  +
T Consensus        40 Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~  113 (504)
T PLN00110         40 PLLGALPLLGN---MPHVALAKMAKRYGPVMFL---KMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQ  113 (504)
T ss_pred             CeeechhhcCC---chHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCC
Confidence            89999987742   3688999999999999999   9999999999999999999988766788776443222 122  3


Q ss_pred             CceeecCChhHHHhhhhccc-CCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          106 DGVFAADGNLWKMQRKMIHS-VMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~~-~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .+++..+|+.|+++|+.+++ .|+..+++.+.+ .+.+++ +.+.+.+.+...+++++|+.+++..+++|+++.++||.+
T Consensus       114 ~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~-~i~~~~-~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~  191 (504)
T PLN00110        114 DMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQ-VRTVEL-GHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRR  191 (504)
T ss_pred             ceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhH-HHHHHH-HHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCc
Confidence            46777889999999999985 799988888755 444553 446666655445667899999999999999999999998


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHI-GKEKELSKAMKTFDRFLYECISLKRERLLTSRKAST  263 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  263 (518)
                      +.... +....++.+.+..+.......  .+..+.+.+.+++. ...+++.++.+.+.+++.+.++++++.....     
T Consensus       192 ~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----  263 (504)
T PLN00110        192 VFETK-GSESNEFKDMVVELMTTAGYF--NIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER-----  263 (504)
T ss_pred             ccccC-chhHHHHHHHHHHHHHHhccc--cHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----
Confidence            62111 112345666666554432110  00011122333332 1235566678888888888888876543211     


Q ss_pred             chhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 043945          264 EEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKAN  343 (518)
Q Consensus       264 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~  343 (518)
                       ....|+++.+++......  ..       +++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       264 -~~~~d~l~~ll~~~~~~~--~~-------~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  333 (504)
T PLN00110        264 -KGNPDFLDVVMANQENST--GE-------KLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQV  333 (504)
T ss_pred             -ccCCChhhHHhhcccccC--CC-------CCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             234589999987542111  01       28999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCc
Q 043945          344 MVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRME  423 (518)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~  423 (518)
                      ++            ....++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++.+.+||||
T Consensus       334 ~~------------~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~  401 (504)
T PLN00110        334 IG------------RNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDP  401 (504)
T ss_pred             hC------------CCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCCh
Confidence            85            345689999999999999999999999999986666667777779999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCccc--cCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCC--Cccc
Q 043945          424 EIWGKDCLEFKPERWISERGSIVH--VPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVS--PCNS  499 (518)
Q Consensus       424 ~~~g~~p~~F~PeRfl~~~~~~~~--~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~  499 (518)
                      ++| +||++|+||||++.+.....  .....|+|||+|+|.|+|+++|.+|+++++|+|+++|++++.++.+..  ...+
T Consensus       402 ~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  480 (504)
T PLN00110        402 DVW-ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFG  480 (504)
T ss_pred             hhc-CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccc
Confidence            999 99999999999965322111  123579999999999999999999999999999999999998765443  2345


Q ss_pred             eeeecCCCeeEEEeecc
Q 043945          500 MVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       500 ~~~~~~~~~~v~~~~r~  516 (518)
                      .++.|+.++.+++++|.
T Consensus       481 ~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        481 LALQKAVPLSAMVTPRL  497 (504)
T ss_pred             cccccCCCceEeeccCC
Confidence            67788889999999984


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1e-68  Score=538.58  Aligned_cols=448  Identities=17%  Similarity=0.261  Sum_probs=334.1

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccCC-
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGD-  106 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g~-  106 (518)
                      |++||++.+..  .+++.++.+++++||++|.+   ++|+.+.|+++||+.+++++..+...|.+++.+.... ...+. 
T Consensus        38 p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~  112 (502)
T PLN02966         38 PVIGNLLQLQK--LNPQRFFAGWAKKYGPILSY---RIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRR  112 (502)
T ss_pred             CeeccHHhcCC--CChhHHHHHHHHHhCCeEEE---ecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcc
Confidence            89999988742  24788999999999999999   8999999999999999999987766677665433211 11222 


Q ss_pred             c-eeecCChhHHHhhhh-cccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          107 G-VFAADGNLWKMQRKM-IHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       107 ~-l~~~~g~~w~~~R~~-l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      . .+..+|+.|+++|+. +.++|+..++..+. +.+.+. .+.+++.|++....++++|+.+++..+++|+++.++||.+
T Consensus       113 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~  190 (502)
T PLN02966        113 DMALNHYTPYYREIRKMGMNHLFSPTRVATFK-HVREEE-ARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKK  190 (502)
T ss_pred             eeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHH-HHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhCCc
Confidence            2 345679999999998 78899999888764 466666 5777777876545567899999999999999999999998


Q ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHH---HhhcChhhHHHHHHhc-cc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043945          185 PNYLSFEFPQVAYANAFNATEQAVFY---RHIVPKSWWKLQKWLH-IG-KEKELSKAMKTFDRFLYECISLKRERLLTSR  259 (518)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~l~-~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  259 (518)
                      ++..+.  ...++.+.+.........   ...+|     +...++ .. ..+....+.+.+.+++.+.++++.+..... 
T Consensus       191 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  262 (502)
T PLN02966        191 YNEDGE--EMKRFIKILYGTQSVLGKIFFSDFFP-----YCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK-  262 (502)
T ss_pred             cCccch--HHHHHHHHHHHHHHHhCcccHHHhhc-----hhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc-
Confidence            864321  223344444333322211   11122     111111 11 123334456667777777777654321111 


Q ss_pred             ccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHH
Q 043945          260 KASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEE  339 (518)
Q Consensus       260 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~E  339 (518)
                           ....|+++.+++..+++.. .       ..++++++.++++.+++||+|||+++++|++|+|++||++|+|+++|
T Consensus       263 -----~~~~~~l~~l~~~~~~~~~-~-------~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~E  329 (502)
T PLN02966        263 -----PETESMIDLLMEIYKEQPF-A-------SEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAE  329 (502)
T ss_pred             -----cccccHHHHHHHHHhccCc-C-------CCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence                 2345788888865432110 1       12899999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhh
Q 043945          340 MKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAM  419 (518)
Q Consensus       340 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~  419 (518)
                      |+++++.          ..+..++++++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.+++|.+
T Consensus       330 i~~v~~~----------~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~  399 (502)
T PLN02966        330 VREYMKE----------KGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAV  399 (502)
T ss_pred             HHHHhcc----------cCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccc
Confidence            9999850          112457999999999999999999999999998766666677878999999999999999999


Q ss_pred             ccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCC-----
Q 043945          420 GRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPV-----  494 (518)
Q Consensus       420 ~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-----  494 (518)
                      ||||++|||||++|+||||++++.+ .......|+|||.|+|+|+|++||.+|+++++|.|+++|+|++.++...     
T Consensus       400 ~rdp~~~g~dP~~F~PeRwl~~~~~-~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~  478 (502)
T PLN02966        400 SRDEKEWGPNPDEFRPERFLEKEVD-FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINM  478 (502)
T ss_pred             cCCcccccCChhhCChhhhcCCCCC-cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCc
Confidence            9999999999999999999975432 1124568999999999999999999999999999999999999876422     


Q ss_pred             CCccceeeecCCCeeEEEeec
Q 043945          495 SPCNSMVLHMKYGLKVQLSKR  515 (518)
Q Consensus       495 ~~~~~~~~~~~~~~~v~~~~r  515 (518)
                      +...++...+...+.++.+|-
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        479 DVMTGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             ccccCeeeccCCCeEEEEEeC
Confidence            223344443333455444443


No 20 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.8e-68  Score=539.42  Aligned_cols=454  Identities=21%  Similarity=0.296  Sum_probs=345.7

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccC--
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFG--  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g--  105 (518)
                      |++||++.+..   .++.++.+++++||++|++   ++|+.+.++++||+.+++++.++...|++++...... ..+|  
T Consensus        41 pl~G~~~~~~~---~~~~~~~~~~~kyG~v~~~---~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~  114 (514)
T PLN03112         41 PIVGNLLQLGP---LPHRDLASLCKKYGPLVYL---RLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCG  114 (514)
T ss_pred             CeeeeHHhcCC---chHHHHHHHHHHhCCeEEE---EecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCC
Confidence            89999988743   3688999999999999999   8899999999999999999987767888876543322 2233  


Q ss_pred             CceeecCChhHHHhhhhcc-cCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          106 DGVFAADGNLWKMQRKMIH-SVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~-~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .+++..+|+.|+++||.+. +.|+.++++.+.+ .+.+. .+.+++.+.+....++++|+.+.++.+++++++.++||.+
T Consensus       115 ~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~-~~~~~-~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~  192 (514)
T PLN03112        115 DVALAPLGPHWKRMRRICMEHLLTTKRLESFAK-HRAEE-ARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQ  192 (514)
T ss_pred             ceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhH-HHHHH-HHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCc
Confidence            3456678999999999954 6899999988765 44444 4556555444334567899999999999999999999998


Q ss_pred             CCCCCC-C-CCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043945          185 PNYLSF-E-FPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLH-IGKEKELSKAMKTFDRFLYECISLKRERLLTSRKA  261 (518)
Q Consensus       185 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  261 (518)
                      +..... . ....++.+.+..+....... ... .+.+.+++++ ....+++.++.+.+.+++...++++++..+.... 
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-  269 (514)
T PLN03112        193 YFGAESAGPKEAMEFMHITHELFRLLGVI-YLG-DYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLP-  269 (514)
T ss_pred             cccccccchHHHHHHHHHHHHHHHHcCCC-cHH-HhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-
Confidence            743221 0 11233445444443321110 000 1112333332 2234666778888999999999987765322110 


Q ss_pred             CCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 043945          262 STEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMK  341 (518)
Q Consensus       262 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~  341 (518)
                        .....|+++.++++..+++.  +       .+++++|.++++.+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       270 --~~~~~d~l~~ll~~~~~~~~--~-------~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~  338 (514)
T PLN03112        270 --GGKDMDFVDVLLSLPGENGK--E-------HMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELD  338 (514)
T ss_pred             --CCccchHHHHHHHhhccccc--c-------CCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence              02346899999975422211  1       289999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhcc
Q 043945          342 ANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGR  421 (518)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~  421 (518)
                      ++++            .++.++++++.+||||+|||+|++|++|+++...+|.+.+|+.++||.|||||.|.++++++||
T Consensus       339 ~~~~------------~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~  406 (514)
T PLN03112        339 SVVG------------RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGR  406 (514)
T ss_pred             HhcC------------CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhC
Confidence            9985            3456899999999999999999999999999876566666777799999999999999999999


Q ss_pred             CccccCCCCCCCCCCCCCCCCCC---ccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC---CCC
Q 043945          422 MEEIWGKDCLEFKPERWISERGS---IVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH---PVS  495 (518)
Q Consensus       422 d~~~~g~~p~~F~PeRfl~~~~~---~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~  495 (518)
                      ||++| +||++|+||||..+.+.   .......+|+|||+|+|+|+|+++|++|+++++++|+++|+|++.++.   ++.
T Consensus       407 d~~~~-~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        407 NTKIW-DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CcccC-CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            99999 99999999998754321   111234679999999999999999999999999999999999987643   222


Q ss_pred             C--ccceeeecCCCeeEEEeeccC
Q 043945          496 P--CNSMVLHMKYGLKVQLSKRTI  517 (518)
Q Consensus       496 ~--~~~~~~~~~~~~~v~~~~r~~  517 (518)
                      .  ..++++.+.+++.++++||.+
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             CccccCcccccCCCeEEEeecCCc
Confidence            2  234555567799999999964


No 21 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.1e-68  Score=534.03  Aligned_cols=434  Identities=16%  Similarity=0.209  Sum_probs=328.4

Q ss_pred             chhhhhHHhhhc--ccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC-
Q 043945           29 SRTRMLSTLVLN--THQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG-  105 (518)
Q Consensus        29 P~iG~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g-  105 (518)
                      |++||++.+...  ...++.++.+++++||++|.+   ++|++++|+++||+++++++.++...|.++.. .......| 
T Consensus        47 PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~-~~~~~~~g~  122 (490)
T PLN02500         47 PFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRS---NLFGEPTIVSADAGLNRFILQNEGRLFECSYP-RSIGGILGK  122 (490)
T ss_pred             CchhhHHHHHhhcccCChHHHHHHHHHHhcccccc---cccCCCeEEecCHHHHHHHHhCCCCeEEeeCc-hHHHHHhCc
Confidence            899998766432  235788899999999999999   99999999999999999999877555643311 11112334 


Q ss_pred             CceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCC
Q 043945          106 DGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINP  185 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  185 (518)
                      .+++..+|+.|+++|+++++.|+..+++.++.+.+.+. ...+.+.+.    .+..+|+.+.++.++++++++++||.+.
T Consensus       123 ~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~-~~~~~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fg~~~  197 (490)
T PLN02500        123 WSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERH-TLLVLDSWK----ENSTFSAQDEAKKFTFNLMAKHIMSMDP  197 (490)
T ss_pred             ccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHHhC----CCCCEEehHHHHHHHHHHHHHHHhCCCC
Confidence            46888899999999999999999998876433344443 233334332    2357899999999999999999999875


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Q 043945          186 NYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEE  265 (518)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  265 (518)
                      +..    ...++.+.+..+......   .+       ..+|....++..++.+.+.+++.+.++++++....+..   ..
T Consensus       198 ~~~----~~~~~~~~~~~~~~~~~~---~~-------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~  260 (490)
T PLN02500        198 GEE----ETEQLKKEYVTFMKGVVS---AP-------LNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDE---SV  260 (490)
T ss_pred             Cch----HHHHHHHHHHHHHhhhhc---ch-------hcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CC
Confidence            321    112233333333222110   11       01222223566677889999999999988765432210   02


Q ss_pred             hhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          266 EEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       266 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      ...|+++.+++..               .++++++++++..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       261 ~~~d~l~~ll~~~---------------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~  325 (490)
T PLN02500        261 EEDDLLGWVLKHS---------------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIAR  325 (490)
T ss_pred             CcchHHHHHHhcc---------------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Confidence            3468999988742               1899999999999999999999999999999999999999999999999874


Q ss_pred             hhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccc
Q 043945          346 MQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEI  425 (518)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~  425 (518)
                      ....       ..+..++++++.+||||+|||+|+||++|+++...|++ .+|+.++||.|||||.|+++.|++||||++
T Consensus       326 ~~~~-------~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~-~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~  397 (490)
T PLN02500        326 AKKQ-------SGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKA-LKDVRYKGYDIPSGWKVLPVIAAVHLDSSL  397 (490)
T ss_pred             cccc-------CCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEe-CCCceeCCEEECCCCEEEechhhcccCccc
Confidence            1000       01235899999999999999999999999999876544 556777999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCcc-----ccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccce
Q 043945          426 WGKDCLEFKPERWISERGSIV-----HVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSM  500 (518)
Q Consensus       426 ~g~~p~~F~PeRfl~~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  500 (518)
                      | +||++|+||||+++++...     ......|+|||.|+|+|+|+++|.+|+++++++|+++|+|++.++.+... .. 
T Consensus       398 ~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~-  474 (490)
T PLN02500        398 Y-DQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FP-  474 (490)
T ss_pred             C-CCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cc-
Confidence            9 9999999999997542111     12356799999999999999999999999999999999999987654322 22 


Q ss_pred             eeecCCCeeEEEee
Q 043945          501 VLHMKYGLKVQLSK  514 (518)
Q Consensus       501 ~~~~~~~~~v~~~~  514 (518)
                      .+.+.++++|++++
T Consensus       475 ~~~~~~~l~~~~~~  488 (490)
T PLN02500        475 FVDFPKGLPIRVRR  488 (490)
T ss_pred             cccCCCCceEEEEe
Confidence            23455789999876


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.6e-69  Score=544.88  Aligned_cols=450  Identities=27%  Similarity=0.411  Sum_probs=357.1

Q ss_pred             ccchhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhc---c-c
Q 043945           27 RSSRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMI---L-E  102 (518)
Q Consensus        27 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~---~-~  102 (518)
                      +.|++||++.+.+ ..++++++.+++++||++|++   +++++++++|+||+.+++|+..+...+..+......   . .
T Consensus         6 ~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~---~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~   81 (463)
T PF00067_consen    6 PLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRI---WPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGP   81 (463)
T ss_dssp             SBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHH
T ss_pred             CcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEE---eEecccccccccchhhcccccccccccccccccccccccccc
Confidence            4499999999975 345899999999999999999   899999999999999999999875555554221111   1 3


Q ss_pred             ccCCceeecCChhHHHhhhhcccCCChh-hHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHh
Q 043945          103 PFGDGVFAADGNLWKMQRKMIHSVMKHK-KFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVL  181 (518)
Q Consensus       103 ~~g~~l~~~~g~~w~~~R~~l~~~f~~~-~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  181 (518)
                      ..+.+++..+|+.|+.+|++++++|+.. .+ .+ .+.+.+. .+.+.+.+.+....++.+|+.++++.+++|+++.++|
T Consensus        82 ~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~-~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   82 FGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KL-EPLIDEE-AEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HH-HHHHHHH-HHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccc-cc-ccccccc-cccccccccccccccceeeeecccccccccccccccc
Confidence            5578899999999999999999999988 44 43 4466666 6778888887655555899999999999999999999


Q ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043945          182 GINPNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKA  261 (518)
Q Consensus       182 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  261 (518)
                      |.++++.+.+ ...++.+.+..+...+......+..+.+++++++....+.+.++.+.+.+++.+.++++++..+.+   
T Consensus       159 G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---  234 (463)
T PF00067_consen  159 GKDFGSLDDE-DFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDG---  234 (463)
T ss_dssp             SSHHHGTTHH-HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS---
T ss_pred             cceeeecccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            9987643321 123456666665543322111111223345555555667777788999999999999998876543   


Q ss_pred             CCchhhhhHHHHHHhcc-hhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHH
Q 043945          262 STEEEEFDVLTAFMVEG-EEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEM  340 (518)
Q Consensus       262 ~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei  340 (518)
                        .....|+++.+++.. +.+++  .       +++++++..+++.+++||+|||+++++|++++|++||++|+||++||
T Consensus       235 --~~~~~d~l~~ll~~~~~~~~~--~-------~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei  303 (463)
T PF00067_consen  235 --DESRRDLLDSLLQASSDSDGP--S-------GLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEI  303 (463)
T ss_dssp             --SSSCSSHHHHHHHHHHTTTTT--S-------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             --ccccccccccccccccccccc--c-------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence              135678999999875 22221  0       29999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhc
Q 043945          341 KANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMG  420 (518)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~  420 (518)
                      +++.+            ++..++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++.+.+|
T Consensus       304 ~~~~~------------~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~  371 (463)
T PF00067_consen  304 DSVLG------------DGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALH  371 (463)
T ss_dssp             HHHTT------------TSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHT
T ss_pred             ccccc------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99985            445899999999999999999999999999966555666677779999999999999999999


Q ss_pred             cCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccc-
Q 043945          421 RMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNS-  499 (518)
Q Consensus       421 ~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~-  499 (518)
                      +||++| +||++|+||||++.+. ........|+|||.|+|.|||+++|++|+++++|+||++|+|+++++.+...... 
T Consensus       372 ~d~~~~-~dp~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  449 (463)
T PF00067_consen  372 RDPEYF-PDPDEFDPERFLDERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQ  449 (463)
T ss_dssp             TSTTTS-SSTTS--TTGGBTTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECS
T ss_pred             cccccc-cccccccccccccccc-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCcccc
Confidence            999999 9999999999998865 1224677899999999999999999999999999999999999987655433322 


Q ss_pred             -eeeecCCCeeEEE
Q 043945          500 -MVLHMKYGLKVQL  512 (518)
Q Consensus       500 -~~~~~~~~~~v~~  512 (518)
                       .++.|+.++.|.|
T Consensus       450 ~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  450 NGFLLPPKPLKVKF  463 (463)
T ss_dssp             CSSSEEESSSEEEE
T ss_pred             CceEeeCCCcEEeC
Confidence             4566666787765


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.3e-67  Score=525.56  Aligned_cols=446  Identities=17%  Similarity=0.199  Sum_probs=336.4

Q ss_pred             ccchhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccCC
Q 043945           27 RSSRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGD  106 (518)
Q Consensus        27 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g~  106 (518)
                      +.|++||++++..  .+++.++.+++++||++|++   ++|+.++++|+||+.+++++.++...|.+++.......+.++
T Consensus         6 ~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          6 GLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTI---RTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CCCccccHHHcCC--CchhHHHHHHHHHhCCeEEE---EECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            3599999999853  24789999999999999999   899999999999999999998877778777644332223332


Q ss_pred             --ceeec-CChhHHHhhhhccc-CCChhhHHHHHHHHHHHHHHhcHHHHhhhhc--cCCceechHHHHHHHHHHHHHHHH
Q 043945          107 --GVFAA-DGNLWKMQRKMIHS-VMKHKKFESALEKTIYQKLENGLIPVLDHAS--EVGIKVDLQDVFQRFTFDNICMSV  180 (518)
Q Consensus       107 --~l~~~-~g~~w~~~R~~l~~-~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~--~~~~~vdl~~~~~~~~~~~~~~~~  180 (518)
                        .++.. +|+.|+++||.+.+ .|+......+ ...+.+. .+.+.+.+.+..  ..++++|+.+.+..+++|+++.++
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~  158 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRF-RDTRDML-IENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQA  158 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHh-HHHHHHH-HHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHH
Confidence              34444 48999999987765 4565555443 3344444 345555554432  235689999999999999999999


Q ss_pred             hCCCCCCCCCCCCc------hHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccch-HHHHHHHHHHHHHHHHHHHHHHH
Q 043945          181 LGINPNYLSFEFPQ------VAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKE-KELSKAMKTFDRFLYECISLKRE  253 (518)
Q Consensus       181 fG~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~i~~~~~  253 (518)
                      ||.+.+........      ..+...+..+........  ...+++++++++.... +...+....+.+++..+++++++
T Consensus       159 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  236 (466)
T PLN02655        159 LGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVD--WRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKK  236 (466)
T ss_pred             hccccccccccccccchhhHHHHHHHHHHHHHHhCCcc--hhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99987654321111      112222222222111000  0112223455543222 22333344556788888887776


Q ss_pred             HHHhhhccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHH
Q 043945          254 RLLTSRKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVE  333 (518)
Q Consensus       254 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q  333 (518)
                      ....+      ....|+++.+++...              .++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       237 ~~~~~------~~~~d~l~~ll~~~~--------------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~  296 (466)
T PLN02655        237 RIARG------EERDCYLDFLLSEAT--------------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQ  296 (466)
T ss_pred             hhcCC------CCcccHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence            54322      234589999997641              1899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEE
Q 043945          334 NKILEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSIL  413 (518)
Q Consensus       334 ~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~  413 (518)
                      +|+++||+++++            . ..++++++.++|||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|+
T Consensus       297 ~~l~~Ei~~~~~------------~-~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~  363 (466)
T PLN02655        297 ERLYREIREVCG------------D-ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIA  363 (466)
T ss_pred             HHHHHHHHHHhC------------C-CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEE
Confidence            999999999986            2 238999999999999999999999999998876666667777999999999999


Q ss_pred             EehhhhccCccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCC
Q 043945          414 ISYYAMGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHP  493 (518)
Q Consensus       414 ~~~~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  493 (518)
                      ++.+++||||++| +||++|+||||++.++..  .....|+|||+|+|.|||+++|..|+++++++|+++|++++.++..
T Consensus       364 ~~~~~~~~d~~~~-~~p~~F~PeR~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  440 (466)
T PLN02655        364 INIYGCNMDKKRW-ENPEEWDPERFLGEKYES--ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE  440 (466)
T ss_pred             ecHHHhcCCcccC-CChhccCccccCCCCccc--CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc
Confidence            9999999999999 999999999999764321  1346799999999999999999999999999999999999976642


Q ss_pred             -CCCccceeeecCCCeeEEEeeccC
Q 043945          494 -VSPCNSMVLHMKYGLKVQLSKRTI  517 (518)
Q Consensus       494 -~~~~~~~~~~~~~~~~v~~~~r~~  517 (518)
                       .....++++.+++++.|++++|..
T Consensus       441 ~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        441 EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             cccchhheeEeecCCcEEEEeecCC
Confidence             344556778899999999999863


No 24 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.7e-66  Score=519.89  Aligned_cols=458  Identities=18%  Similarity=0.233  Sum_probs=335.2

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhc-CCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhccccc--C
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKS-RGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPF--G  105 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~--g  105 (518)
                      |++||++++..... ...++....++| |++|.+   ++|++++|+|+||+.+++++.++...|++++.......+.  +
T Consensus        49 P~iGnl~~l~~~~~-~~~~~~~~~~~~~g~i~~~---~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~  124 (534)
T PLN03018         49 PILGNLPELIMTRP-RSKYFHLAMKELKTDIACF---NFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNY  124 (534)
T ss_pred             CeeccHHHhccCCC-cchhHHHHHHHhCCCeEEE---EeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCC
Confidence            89999999753211 113344555555 799999   9999999999999999999988767788876543322121  1


Q ss_pred             Cceeec-CChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCC
Q 043945          106 DGVFAA-DGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIN  184 (518)
Q Consensus       106 ~~l~~~-~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~  184 (518)
                      .++++. +|+.|+++|+++++.|...+....+..+...+ .+.+++.+.+....++++|+.+.+..+++++++.++||.+
T Consensus       125 ~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~  203 (534)
T PLN03018        125 KSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIE-ADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRR  203 (534)
T ss_pred             CceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCc
Confidence            246655 59999999999999886666655555454444 4667777765444456799999999999999999999999


Q ss_pred             CCCCCCCC-CchHHHHHHHHHHHHHHH-HhhcC-----hhhHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043945          185 PNYLSFEF-PQVAYANAFNATEQAVFY-RHIVP-----KSWWKLQKWLHI-GKEKELSKAMKTFDRFLYECISLKRERLL  256 (518)
Q Consensus       185 ~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~p-----~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  256 (518)
                      +...+... ....+.+.+......... ...+|     .++++++++.+. ....+.....+.+.+++.++++++++...
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  283 (534)
T PLN03018        204 HVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWR  283 (534)
T ss_pred             cccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            75432110 011122222222221111 01111     111112221111 12334455667788999999998876532


Q ss_pred             hhhccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHH
Q 043945          257 TSRKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKI  336 (518)
Q Consensus       257 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l  336 (518)
                      ....   .....|+++.+++...+++.         ..+++++|.+++..+++||+|||+++++|++++|++||++|+|+
T Consensus       284 ~~~~---~~~~~d~l~~ll~~~~~~~~---------~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        284 EKGG---KAAVEDWLDTFITLKDQNGK---------YLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             hccC---CCCcccHHHHHHHhhcccCC---------CCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            1110   01246899999975422111         01899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEeh
Q 043945          337 LEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISY  416 (518)
Q Consensus       337 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~  416 (518)
                      ++||+++++            .+..++.+++.+||||+|||+|+||++|+++...+|.+.+|+.++||.|||||.|.++.
T Consensus       352 ~~Ei~~v~~------------~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~  419 (534)
T PLN03018        352 LKELDEVVG------------KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCR  419 (534)
T ss_pred             HHHHHHHhC------------CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEECh
Confidence            999999985            34578999999999999999999999999998877777778888999999999999999


Q ss_pred             hhhccCccccCCCCCCCCCCCCCCCCCCcc----ccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCC
Q 043945          417 YAMGRMEEIWGKDCLEFKPERWISERGSIV----HVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGH  492 (518)
Q Consensus       417 ~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~----~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  492 (518)
                      |++||||++| +||++|+||||++.++...    ......|+|||+|+|.|+|+++|.+|+++++++|+++|++++.++.
T Consensus       420 ~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  498 (534)
T PLN03018        420 PGLGRNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF  498 (534)
T ss_pred             HHhcCCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC
Confidence            9999999999 9999999999997543211    1234679999999999999999999999999999999999987753


Q ss_pred             -CCCCc-cceeeecCCCeeEEEeecc
Q 043945          493 -PVSPC-NSMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       493 -~~~~~-~~~~~~~~~~~~v~~~~r~  516 (518)
                       ++... ..+++..+.++.|++++|.
T Consensus       499 ~~~~~~~~~~~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        499 GPLSLEEDDASLLMAKPLLLSVEPRL  524 (534)
T ss_pred             CCCCccccccceecCCCeEEEEEecc
Confidence             33221 2233445568999999994


No 25 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=4.5e-67  Score=521.34  Aligned_cols=422  Identities=18%  Similarity=0.177  Sum_probs=324.8

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC-Cc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG-DG  107 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g-~~  107 (518)
                      |++||++.+.++   ...++.+++++||++|++   ++|++++++++||+.+++++.++...|.++.. .......| .+
T Consensus        40 P~~G~~~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~~~lg~~~  112 (463)
T PLN02774         40 PLFGETTEFLKQ---GPDFMKNQRLRYGSFFKS---HILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QSMLDILGTCN  112 (463)
T ss_pred             CchhhHHHHHHh---hHHHHHHHHHHhccCccc---eecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHHHHHhCccc
Confidence            899999887654   456889999999999999   99999999999999999999876555544322 12223344 46


Q ss_pred             eeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCC
Q 043945          108 VFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNY  187 (518)
Q Consensus       108 l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~  187 (518)
                      ++..+|+.|+.+|+++.++|+...++..+.+.+.+. .+.+.+.|.    .++++|+.+.+..+++++++.++||.+.+.
T Consensus       113 ~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~  187 (463)
T PLN02774        113 IAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEF-MRSHLSGWD----GLKTIDIQEKTKEMALLSALKQIAGTLSKP  187 (463)
T ss_pred             hhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHHHcCCCChH
Confidence            777899999999999999999988876333344444 344444333    235799999999999999999999976421


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCchhh
Q 043945          188 LSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEEEE  267 (518)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  267 (518)
                           ...++.+.+..+...   ....|       .++|....++..++.+.+.+++.+.|+++++..         ...
T Consensus       188 -----~~~~~~~~~~~~~~~---~~~~~-------~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~~  243 (463)
T PLN02774        188 -----ISEEFKTEFFKLVLG---TLSLP-------IDLPGTNYRSGVQARKNIVRMLRQLIQERRASG---------ETH  243 (463)
T ss_pred             -----HHHHHHHHHHHHhcc---cccCC-------cCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcC---------CCc
Confidence                 112222222222111   11111       123322345667788899999999998876431         234


Q ss_pred             hhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhh
Q 043945          268 FDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMVMQ  347 (518)
Q Consensus       268 ~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  347 (518)
                      .|+++.+++......           .+++++|.+++..+++||+|||+++++|++++|++||++|+|+++|++++++. 
T Consensus       244 ~d~l~~ll~~~~~~~-----------~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~-  311 (463)
T PLN02774        244 TDMLGYLMRKEGNRY-----------KLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRER-  311 (463)
T ss_pred             ccHHHHHHhCccCCC-----------CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc-
Confidence            689999987431111           28999999999999999999999999999999999999999999999998750 


Q ss_pred             cccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccccC
Q 043945          348 KQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEIWG  427 (518)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  427 (518)
                              ...+..++++++.+||||+|||+|+||++|+++.+.|++ .+|+.++||.|||||.|+++++.+||||++| 
T Consensus       312 --------~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~-~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~-  381 (463)
T PLN02774        312 --------KRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKT-TQDMELNGYVIPKGWRIYVYTREINYDPFLY-  381 (463)
T ss_pred             --------cCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCccccc-CCCeeECCEEECCCCEEEEehHHhcCCcccC-
Confidence                    001346899999999999999999999999998776554 4567679999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecCCC
Q 043945          428 KDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMKYG  507 (518)
Q Consensus       428 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (518)
                      +||++|+||||++.+..    ....|+|||+|+|.|||+++|.+|++++++.|+++|++++.++.+....  ..+.|+++
T Consensus       382 ~dP~~F~PeRfl~~~~~----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~--~~~~p~~g  455 (463)
T PLN02774        382 PDPMTFNPWRWLDKSLE----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMKF--PRVEAPNG  455 (463)
T ss_pred             CChhccCchhcCCCCcC----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccccC--CCCCCCCC
Confidence            99999999999965321    1235999999999999999999999999999999999999876543322  24558899


Q ss_pred             eeEEEee
Q 043945          508 LKVQLSK  514 (518)
Q Consensus       508 ~~v~~~~  514 (518)
                      ++|++++
T Consensus       456 ~~~~~~~  462 (463)
T PLN02774        456 LHIRVSP  462 (463)
T ss_pred             ceEEeee
Confidence            9999875


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.1e-66  Score=513.27  Aligned_cols=418  Identities=18%  Similarity=0.238  Sum_probs=328.3

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC-Cc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG-DG  107 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g-~~  107 (518)
                      |++|+++++...  +++.++.+++++||++|++   +++++++|+++||+.+++++.++.+.|. ..++.......| .+
T Consensus        44 P~iG~~~~~~~~--~~~~~~~~~~~~yG~i~~~---~~~~~~~v~v~~p~~~~~vl~~~~~~~~-~~~~~~~~~~~g~~~  117 (463)
T PLN02196         44 PYVGETFQLYSQ--DPNVFFASKQKRYGSVFKT---HVLGCPCVMISSPEAAKFVLVTKSHLFK-PTFPASKERMLGKQA  117 (463)
T ss_pred             CccchHHHHHhc--CHHHHHHHHHHHhhhhhee---eecCCceEEEcCHHHHHHHHhCCCCccc-ccCchHHHHHcCccc
Confidence            899999886432  4788999999999999999   8999999999999999999987755563 222221123345 47


Q ss_pred             eeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCC
Q 043945          108 VFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNY  187 (518)
Q Consensus       108 l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~  187 (518)
                      ++..+|+.|+++||++++.|+..++..+.+ .+.+. .+.+.+.|.     ++++|+.++++.+++++++.++||.+...
T Consensus       118 l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~-~i~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~fG~~~~~  190 (463)
T PLN02196        118 IFFHQGDYHAKLRKLVLRAFMPDAIRNMVP-DIESI-AQESLNSWE-----GTQINTYQEMKTYTFNVALLSIFGKDEVL  190 (463)
T ss_pred             ccccCcHHHHHHHHHHHHhcChHHHHHHHH-HHHHH-HHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHcCCCCch
Confidence            888999999999999999999999888754 45555 344554442     34789999999999999999999987521


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCchhh
Q 043945          188 LSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEEEE  267 (518)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  267 (518)
                           ....+.+.+..+...   ...+|       ..++....++..++.+.+.+++.+.++++++..         ...
T Consensus       191 -----~~~~~~~~~~~~~~~---~~~~~-------~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~---------~~~  246 (463)
T PLN02196        191 -----YREDLKRCYYILEKG---YNSMP-------INLPGTLFHKSMKARKELAQILAKILSKRRQNG---------SSH  246 (463)
T ss_pred             -----HHHHHHHHHHHHhcc---hhccc-------ccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC---------CCc
Confidence                 111222222111100   00111       112222245667888899999999998876532         234


Q ss_pred             hhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhh
Q 043945          268 FDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMVMQ  347 (518)
Q Consensus       268 ~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  347 (518)
                      .|+++.+++..   +           +++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++.+.+. 
T Consensus       247 ~d~l~~ll~~~---~-----------~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~-  311 (463)
T PLN02196        247 NDLLGSFMGDK---E-----------GLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKD-  311 (463)
T ss_pred             ccHHHHHHhcC---C-----------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc-
Confidence            68888888532   1           28999999999999999999999999999999999999999999999998751 


Q ss_pred             cccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccccC
Q 043945          348 KQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEIWG  427 (518)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g  427 (518)
                              .+....++++++.++|||+|||+|+||++|+++...|++. +|+.++||.|||||.|+++.+.+||||++| 
T Consensus       312 --------~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~-~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~-  381 (463)
T PLN02196        312 --------KEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAV-EDVEYEGYLIPKGWKVLPLFRNIHHSADIF-  381 (463)
T ss_pred             --------cccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeec-cccccCCEEeCCCCEEEeeHHHhcCCchhc-
Confidence                    1123568999999999999999999999999999886655 566669999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecCCC
Q 043945          428 KDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMKYG  507 (518)
Q Consensus       428 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (518)
                      +||++|+||||++..      ....|+|||.|+|.|+|+++|++|+++++++|+++|+|++++++ .......+..|+++
T Consensus       382 ~dP~~F~PeRfl~~~------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~p~~~  454 (463)
T PLN02196        382 SDPGKFDPSRFEVAP------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQYGPFALPQNG  454 (463)
T ss_pred             CCcCccChhhhcCCC------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceEEcccccCCCC
Confidence            999999999999642      34679999999999999999999999999999999999998753 22334445679999


Q ss_pred             eeEEEeec
Q 043945          508 LKVQLSKR  515 (518)
Q Consensus       508 ~~v~~~~r  515 (518)
                      ++|+++.+
T Consensus       455 ~~~~~~~~  462 (463)
T PLN02196        455 LPIALSRK  462 (463)
T ss_pred             ceEEEecC
Confidence            99998754


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.6e-65  Score=506.57  Aligned_cols=432  Identities=15%  Similarity=0.204  Sum_probs=331.7

Q ss_pred             chhhhhHHhhhc--ccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccCC
Q 043945           29 SRTRMLSTLVLN--THQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGD  106 (518)
Q Consensus        29 P~iG~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g~  106 (518)
                      |++||++.+...  ...++.++.++.++||+||++   ++|+++.|+++||+++++++.++...|..+.. .......|.
T Consensus        16 P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~---~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~-~~~~~l~g~   91 (452)
T PLN03141         16 PVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKS---HIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP-KSLTELMGK   91 (452)
T ss_pred             CchhhHHHHHhhcccCChHHHHHHHHHHhhheeee---ccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc-hhHHHHhCc
Confidence            999999987542  234788999999999999999   99999999999999999999887666654321 111234453


Q ss_pred             -ceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCC
Q 043945          107 -GVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINP  185 (518)
Q Consensus       107 -~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  185 (518)
                       +++..+|+.|+++|+++.++|+..++...+...+.+.    +.+.+++. ..++.+|+.+.+..++++++++++||.+.
T Consensus        92 ~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~vi~~~~~G~~~  166 (452)
T PLN03141         92 SSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERY----VSESLDSW-RDDPPVLVQDETKKIAFEVLVKALISLEP  166 (452)
T ss_pred             ccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH----HHHHHHhc-cCCCCEEhHHHHHHHHHHHHHHHHcCCCc
Confidence             6888899999999999999998887766433344333    22223322 23568899999999999999999999765


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Q 043945          186 NYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEE  265 (518)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  265 (518)
                      +.     ...++.+.+..+.....   ..|.       ++|.....+..++.+.+.+++.++|+++++....+... ...
T Consensus       167 ~~-----~~~~~~~~~~~~~~~~~---~~~~-------~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~-~~~  230 (452)
T PLN03141        167 GE-----EMEFLKKEFQEFIKGLM---SLPI-------KLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEED-ETG  230 (452)
T ss_pred             hH-----HHHHHHHHHHHHhhhHH---hCcc-------CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-ccC
Confidence            31     12223333333332211   1221       12222234456778899999999999887654321100 001


Q ss_pred             hhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          266 EEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       266 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      ...|+++.+++...  .           .+++++|..+++.+++||+|||+++++|++++|+.||++|+++++|++++.+
T Consensus       231 ~~~d~l~~ll~~~~--~-----------~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~  297 (452)
T PLN03141        231 IPKDVVDVLLRDGS--D-----------ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKR  297 (452)
T ss_pred             ChhhHHHHHHhcCC--C-----------CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHh
Confidence            24689999887541  1           1899999999999999999999999999999999999999999999998863


Q ss_pred             hhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccc
Q 043945          346 MQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEI  425 (518)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~  425 (518)
                      ..        ...+..++++++.+||||+|||+|+||++|+++.+.|+ +.+|+.++||.||||+.|+++.+.+||||++
T Consensus       298 ~~--------~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~-~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~  368 (452)
T PLN03141        298 LK--------ADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRK-AMKDVEIKGYLIPKGWCVLAYFRSVHLDEEN  368 (452)
T ss_pred             cc--------CCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCccee-ecCCeeECCEEECCCCEEEEehHhccCCchh
Confidence            10        01234689999999999999999999999999866654 4566777999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecC
Q 043945          426 WGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMK  505 (518)
Q Consensus       426 ~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  505 (518)
                      | +||++|+||||++.+.     ....|+|||+|+|.|+|+++|.+|+++++|+|+++|++++.++...   ...++.|+
T Consensus       369 ~-~dP~~F~PeRfl~~~~-----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~~~~~~~~  439 (452)
T PLN03141        369 Y-DNPYQFNPWRWQEKDM-----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---NFPTVRMK  439 (452)
T ss_pred             c-CCccccCcccccCCCC-----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---ecccccCC
Confidence            9 9999999999997532     3467999999999999999999999999999999999998775422   23477899


Q ss_pred             CCeeEEEeecc
Q 043945          506 YGLKVQLSKRT  516 (518)
Q Consensus       506 ~~~~v~~~~r~  516 (518)
                      .++.|++++|.
T Consensus       440 ~~~~~~~~~~~  450 (452)
T PLN03141        440 RKLPIWVTRID  450 (452)
T ss_pred             CCceEEEEeCC
Confidence            99999999985


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6.6e-65  Score=503.35  Aligned_cols=428  Identities=18%  Similarity=0.219  Sum_probs=327.8

Q ss_pred             chhhhhHHhhhc--ccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcccccC-
Q 043945           29 SRTRMLSTLVLN--THQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFG-  105 (518)
Q Consensus        29 P~iG~~~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~g-  105 (518)
                      |++||++.+...  ..+++.++.+++++||++|++   ++++++.++|+||+.+++++.++...|.++.. .......| 
T Consensus        39 P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~-~~~~~~lg~  114 (472)
T PLN02987         39 PLVGETLQLISAYKTENPEPFIDERVARYGSLFMT---HLFGEPTVFSADPETNRFILQNEGKLFECSYP-GSISNLLGK  114 (472)
T ss_pred             CchhhHHHHHhhcccCChHHHHHHHHHHhchhhhh---hhcCCCeEEEeCHHHHHHHHhCCCceEEecCc-HHHHHHhCc
Confidence            899999987532  135788899999999999999   89999999999999999999887666765432 12223345 


Q ss_pred             CceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCC
Q 043945          106 DGVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINP  185 (518)
Q Consensus       106 ~~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  185 (518)
                      ++++..+|+.|+++|+++.+.++...+..+....+.    +.+...+++.   .+++++.+.+.+++++++++++||.+.
T Consensus       115 ~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~v~~~~~~~~~t~~vi~~~~fg~~~  187 (472)
T PLN02987        115 HSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDID----RLIRFNLDSW---SSRVLLMEEAKKITFELTVKQLMSFDP  187 (472)
T ss_pred             ccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHH----HHHHHHHHhh---ccceehHHHHHHHHHHHHHHHHcCCCC
Confidence            578888999999999998754344444443221121    2222222221   146899999999999999999999865


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Q 043945          186 NYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEE  265 (518)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  265 (518)
                      +.     ....+.+.+........ ...+|     +   + ....++..++.+++.+++.++|+++++....+.     .
T Consensus       188 ~~-----~~~~~~~~~~~~~~~~~-~~~~p-----~---l-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-----~  247 (472)
T PLN02987        188 GE-----WTESLRKEYVLVIEGFF-SVPLP-----L---F-STTYRRAIQARTKVAEALTLVVMKRRKEEEEGA-----E  247 (472)
T ss_pred             hH-----HHHHHHHHHHHHHhhhh-cCCCc-----C---C-CchHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-----c
Confidence            31     11223333332222111 01112     1   1 123567788899999999999999876543220     2


Q ss_pred             hhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          266 EEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       266 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      ...|+++.+++...              +++++++.++++.+++||+|||+++++|++++|++||++|+++++|++.+.+
T Consensus       248 ~~~d~l~~ll~~~~--------------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~  313 (472)
T PLN02987        248 KKKDMLAALLASDD--------------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRA  313 (472)
T ss_pred             ccccHHHHHHhcCC--------------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHc
Confidence            34689999997541              1899999999999999999999999999999999999999999999999874


Q ss_pred             hhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccc
Q 043945          346 MQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEI  425 (518)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~  425 (518)
                      .         ......++++++.+|||++||++|+||++|+++...|++. +|+.++||.|||||.|+++.+.+||||++
T Consensus       314 ~---------~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~-~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~  383 (472)
T PLN02987        314 M---------KSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAM-TDIEVKGYTIPKGWKVFASFRAVHLDHEY  383 (472)
T ss_pred             c---------cCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCC-CCeeECCEEECCCCEEEEehHHhhCCccc
Confidence            0         0123457899999999999999999999999986665544 56777999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecC
Q 043945          426 WGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMK  505 (518)
Q Consensus       426 ~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  505 (518)
                      | +||++|+||||++.+...  .....|+|||+|+|.|||+++|.+|++++++.|+++|++++.++.+...  ..++.|.
T Consensus       384 ~-~~p~~F~PeRfl~~~~~~--~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~  458 (472)
T PLN02987        384 F-KDARTFNPWRWQSNSGTT--VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQ  458 (472)
T ss_pred             C-CCccccCcccCCCCCCCC--CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCC
Confidence            9 999999999999753321  2345799999999999999999999999999999999999987765444  3478899


Q ss_pred             CCeeEEEeecc
Q 043945          506 YGLKVQLSKRT  516 (518)
Q Consensus       506 ~~~~v~~~~r~  516 (518)
                      +++++++++|.
T Consensus       459 ~~~~~~~~~r~  469 (472)
T PLN02987        459 KRYPINVKRRD  469 (472)
T ss_pred             CCceEEEEecc
Confidence            99999999984


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-65  Score=465.10  Aligned_cols=435  Identities=19%  Similarity=0.290  Sum_probs=356.7

Q ss_pred             chhhhhHHhhhcccchHHHHHHHHHhcCCeEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhcc-cccCCc
Q 043945           29 SRTRMLSTLVLNTHQLHEFATRVLKKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGDG  107 (518)
Q Consensus        29 P~iG~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~-~~~g~~  107 (518)
                      |++|+...|.++   +.++++++.+|||+||++   .++|+.+.++.+|+....+++.....++-...+..+. +.+|+|
T Consensus        41 P~lG~a~~fgk~---P~eFl~~~~~K~GdVFTv---~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~~  114 (486)
T KOG0684|consen   41 PWLGSALAFGKD---PLEFLRECRKKYGDVFTV---LLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFGKG  114 (486)
T ss_pred             chhhHHHHhccC---HHHHHHHHHHhcCCeEEE---EEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcCCC
Confidence            999999999876   899999999999999999   8999999999999999999987655566555554444 778888


Q ss_pred             ee-ecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCC
Q 043945          108 VF-AADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPN  186 (518)
Q Consensus       108 l~-~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~  186 (518)
                      +. ..++....++.+++..++....++++++.+.+ ++.+.+...+.   +.|.+..+.+++..+++.+.-.++||....
T Consensus       115 v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~-el~~~f~~~~~---~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~  190 (486)
T KOG0684|consen  115 VVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLE-ELHAYFETSLG---ESGETDGLYTFCRLIIFTASRLLLGGEVRD  190 (486)
T ss_pred             ccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHH-HHHHHHhcccc---cccchhHhhhhhHHHhhhhHHHhhhhhhhh
Confidence            64 46788899999999999999999998875443 33555544233   356677889999999999999999998775


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHH-HHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCch
Q 043945          187 YLSFEFPQVAYANAFNATEQAVF-YRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEE  265 (518)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  265 (518)
                      ..+     ......+.++...+. ....+|     .  ++|....++..++++.+.+.+.+.|.+|++..+        .
T Consensus       191 ~~d-----~~~a~l~~dLd~~F~~~d~~FP-----~--~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s--------~  250 (486)
T KOG0684|consen  191 QLD-----ADVAKLYHDLDQGFQPFDFLFP-----Y--NLPIPLLRRRDRARKKISKIFSKIILDRRASIS--------K  250 (486)
T ss_pred             hhc-----chHHHHHHHHhccccchHhhcc-----c--CCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc--------c
Confidence            433     234445555544332 112223     1  677778888889999999999999999998653        3


Q ss_pred             hhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          266 EEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       266 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      ...|++..+++.. +++.          +.+++|+....+.+++||+.||+.+..|++++|++|||+++++++|+.+++|
T Consensus       251 ~~~dmlq~l~~~y-~dg~----------~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG  319 (486)
T KOG0684|consen  251 WDNDMLQSLMEKY-KDGR----------PTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLG  319 (486)
T ss_pred             ccHHHHHHHHHHh-hcCC----------cCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Confidence            5568888888722 2221          2899999999999999999999999999999999999999999999999997


Q ss_pred             hhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecC---ceeeCCCCeEEEehhhhccC
Q 043945          346 MQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPS---GHRINKNHSILISYYAMGRM  422 (518)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~---g~~ip~Gt~v~~~~~~~~~d  422 (518)
                                 ++...++++.+++||.|++||+|||||+||.+...|.+.+|-++.+   .|.||+|++|.++++.+|||
T Consensus       320 -----------~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~  388 (486)
T KOG0684|consen  320 -----------EKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRD  388 (486)
T ss_pred             -----------ccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCC
Confidence                       4555699999999999999999999999999999988877766644   39999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCc-c--ccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCC-CCcc
Q 043945          423 EEIWGKDCLEFKPERWISERGSI-V--HVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPV-SPCN  498 (518)
Q Consensus       423 ~~~~g~~p~~F~PeRfl~~~~~~-~--~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~  498 (518)
                      |++| +||+.|+|+||++++++. +  ..-++.|||||+|+|.|||+.||.+|+|.++..+|++||+++.+++-. ..-.
T Consensus       389 peif-~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s  467 (486)
T KOG0684|consen  389 PEIF-PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYS  467 (486)
T ss_pred             cccc-CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHH
Confidence            9999 999999999999877654 2  233456799999999999999999999999999999999999996322 2223


Q ss_pred             ceeeecCCCeeEEEeecc
Q 043945          499 SMVLHMKYGLKVQLSKRT  516 (518)
Q Consensus       499 ~~~~~~~~~~~v~~~~r~  516 (518)
                      .++..|..+++++-+.|.
T Consensus       468 ~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  468 RMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             HhhcCCCCCceEEEeecC
Confidence            458899999999998874


No 30 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.6e-63  Score=500.72  Aligned_cols=432  Identities=16%  Similarity=0.198  Sum_probs=329.2

Q ss_pred             chhhhhHHhhhc--ccchHHHHHHHHHhcCC--eEEEeccccCCccEEEEcChhhHHHhhhcCCCCCCCCcchhhccccc
Q 043945           29 SRTRMLSTLVLN--THQLHEFATRVLKKSRG--TLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPF  104 (518)
Q Consensus        29 P~iG~~~~~~~~--~~~~~~~~~~~~~~yG~--v~~~~~p~~~~~~~v~v~dpe~i~~v~~~~~~~~~~~~~~~~~~~~~  104 (518)
                      |++|+++.+...  ..++++++.+++++||+  +|++   ++++.++|+++||+.+++++.++ +.|.++..... ....
T Consensus        51 PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~---~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~-~~~~  125 (490)
T PLN02302         51 PVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKA---FMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPEST-VELI  125 (490)
T ss_pred             CccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceee---ecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhH-HHHh
Confidence            899999988643  23578899999999997  6888   88999999999999999999876 56665432211 1234


Q ss_pred             CC-ceeecCChhHHHhhhhcccCCC-hhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhC
Q 043945          105 GD-GVFAADGNLWKMQRKMIHSVMK-HKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLG  182 (518)
Q Consensus       105 g~-~l~~~~g~~w~~~R~~l~~~f~-~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  182 (518)
                      |. +++..+|+.|+++||.+.+.|+ .+++..+.+ .+.+.+ +.+++.+..    ++.+|+.+.++.+++++++.++||
T Consensus       126 g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~-~i~~~v-~~~~~~~~~----~~~v~~~~~~~~~~~~vi~~~~~G  199 (490)
T PLN02302        126 GRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIP-YIEENV-KSCLEKWSK----MGEIEFLTELRKLTFKIIMYIFLS  199 (490)
T ss_pred             ccccccccCcHHHHHHHHHHHhccCCHHHHHHHHH-HHHHHH-HHHHHHhcC----CCCEehHHHHHHHHHHHHHHHHcC
Confidence            43 4566799999999999999995 567776654 555553 444444432    246999999999999999999999


Q ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 043945          183 INPNYLSFEFPQVAYANAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKAS  262 (518)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  262 (518)
                      .+.+..     ..++.+.+..+.....   ..+       ..++....++..++.+.+.+++.+.++++++....+.   
T Consensus       200 ~~~~~~-----~~~~~~~~~~~~~~~~---~~~-------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~---  261 (490)
T PLN02302        200 SESELV-----MEALEREYTTLNYGVR---AMA-------INLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNI---  261 (490)
T ss_pred             CCChHH-----HHHHHHHHHHHHHHhh---hCC-------cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccC---
Confidence            875321     1222222222111110   111       0111112244556778889999999998876533211   


Q ss_pred             CchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 043945          263 TEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKA  342 (518)
Q Consensus       263 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~  342 (518)
                       .....|+++.+++...+++.          .+++++|.++++.+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       262 -~~~~~d~l~~ll~~~~~~~~----------~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~  330 (490)
T PLN02302        262 -SPRKKDMLDLLLDAEDENGR----------KLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEE  330 (490)
T ss_pred             -CCCcCCHHHHHHhhhccCCC----------CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence             12457899999976432211          2899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccC
Q 043945          343 NMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRM  422 (518)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d  422 (518)
                      +++...        .....++++++.+||||+|||+|+||++|+++...|++. +|+.++||.|||||.|.++.+.+|||
T Consensus       331 v~~~~~--------~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~-~d~~~~g~~Ip~Gt~v~~~~~~~~rd  401 (490)
T PLN02302        331 IAKKRP--------PGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAK-TDVEVNGYTIPKGWKVLAWFRQVHMD  401 (490)
T ss_pred             HHhcCC--------CCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhccc-CCEeECCEEECCCCEEEeeHHHhcCC
Confidence            985100        012247999999999999999999999999998776654 57777999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceee
Q 043945          423 EEIWGKDCLEFKPERWISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVL  502 (518)
Q Consensus       423 ~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  502 (518)
                      |++| +||++|+||||++..     .....|+|||+|+|.|+|+++|.+|+++++++++++|++++.++. ........+
T Consensus       402 ~~~~-~dP~~F~PeR~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~  474 (490)
T PLN02302        402 PEVY-PNPKEFDPSRWDNYT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVMYLPHP  474 (490)
T ss_pred             cccC-CCccccChhhcCCCC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-CcceeCCCC
Confidence            9999 999999999999653     244579999999999999999999999999999999999998653 222333447


Q ss_pred             ecCCCeeEEEeecc
Q 043945          503 HMKYGLKVQLSKRT  516 (518)
Q Consensus       503 ~~~~~~~v~~~~r~  516 (518)
                      .|.+++.+++++|.
T Consensus       475 ~p~~~~~~~~~~~~  488 (490)
T PLN02302        475 RPKDNCLARITKVA  488 (490)
T ss_pred             CCCCCceEEEEecc
Confidence            88999999999885


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.5e-55  Score=431.41  Aligned_cols=397  Identities=13%  Similarity=0.151  Sum_probs=281.3

Q ss_pred             chhhhhHHhhh--cccchHHHHHHHHHhcCC-eEEEeccccCCccE-------EEEcChhhHHHhhhc----CCCCCCCC
Q 043945           29 SRTRMLSTLVL--NTHQLHEFATRVLKKSRG-TLEFKGPWFAKMDF-------IITSDPMNVHYISSK----NFSNYPKG   94 (518)
Q Consensus        29 P~iG~~~~~~~--~~~~~~~~~~~~~~~yG~-v~~~~~p~~~~~~~-------v~v~dpe~i~~v~~~----~~~~~~~~   94 (518)
                      |++|+..++.+  ...++..|+.+..+|||+ ||++   +++|.|+       |++++|++++.++..    +...+.. 
T Consensus        26 P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~---~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~-  101 (480)
T PLN02648         26 PFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRV---NMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTG-  101 (480)
T ss_pred             cCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEe---cCCCCCCCCCCCCEEEEEcCCceeeeecchhcccccccee-
Confidence            99999998776  334567999999999999 9999   8888666       999999999999975    3233433 


Q ss_pred             cchhhcccccC-C---ceeecCChhHHHhhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHH
Q 043945           95 PDLRMILEPFG-D---GVFAADGNLWKMQRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQR  170 (518)
Q Consensus        95 ~~~~~~~~~~g-~---~l~~~~g~~w~~~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  170 (518)
                      .+.... .++| +   +++..+|+.|+++||++.++|+ ..++.+++ .+.+. .+.+.+.|......+.++|+.+.++.
T Consensus       102 ~~~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~-~m~~~-~~~~~~~w~~~~~~~~~vdv~~~~~~  177 (480)
T PLN02648        102 TYMPST-AFTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIP-EFRAA-FAELFDTWEAELAKKGKAEFNDPLDQ  177 (480)
T ss_pred             eeccCc-cccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhhhh-HHHHH-HHHHHHHHHHHHhhCCCccccchHHH
Confidence            222222 3566 4   6677889999999999999998 46777655 56566 46666677543234457999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhhcChh---hHHHHHH-----hcccchHHHHHHHHHHHH
Q 043945          171 FTFDNICMSVLGINPNYLSFEFPQVAYANAFNATEQAVFYRHIVPKS---WWKLQKW-----LHIGKEKELSKAMKTFDR  242 (518)
Q Consensus       171 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~-----l~~~~~~~~~~~~~~l~~  242 (518)
                      ++++++++++||.+.+..       .+.+.+..+..........|..   +...++.     ++.... ...+..+.+.+
T Consensus       178 lt~~vi~~~lfG~~~~~~-------~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~  249 (480)
T PLN02648        178 MAFNFLCKALTGKDPSET-------ALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFF-LVKSDYDKLYD  249 (480)
T ss_pred             HHHHHHHHHHcCCCcchh-------hhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchh-hhhccHHHHHH
Confidence            999999999999876531       1222222222211111111100   0000000     000000 00001111111


Q ss_pred             HHHHHHHHHHHHHHhhhccCCchhhhhHHHHHHhcchhhhhhhhhhhhhcccCCcHHHHHHHHH-HHHhhhhhHHHHHHH
Q 043945          243 FLYECISLKRERLLTSRKASTEEEEFDVLTAFMVEGEEEEEMNEDREIGALKRNDKFLRDTAFN-LLAAGKETVNSGLVW  321 (518)
Q Consensus       243 ~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~  321 (518)
                      +++                       +.+..+++...+.            +++++++.++++. +.+++++|++++++|
T Consensus       250 ~~~-----------------------~~~~~ll~~~~~~------------~l~~~ei~~~~l~~~~~~t~~~~~~~l~~  294 (480)
T PLN02648        250 FFR-----------------------ASATEALDLAEKF------------GISREEALHNLLFVLGFNAFGGFKIFFPA  294 (480)
T ss_pred             HHH-----------------------HHHHHHHHHHHhc------------CCCHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            111                       1122333222111            2899999998875 446677888889999


Q ss_pred             HHHHHhcCch-HHHHHHHHHHHhhhhhcccccccccccccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCcee
Q 043945          322 FFWLVATHPS-VENKILEEMKANMVMQKQEEEEDDGEKRLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVL  400 (518)
Q Consensus       322 ~l~~L~~~p~-~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~  400 (518)
                      ++|+|++||+ +|++|++|++.+.+           ..+..++.+++.+||||++||+|+||++|+++...|++.++ +.
T Consensus       295 ~l~~L~~~p~~v~~klr~Ei~~~~~-----------~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d-~~  362 (480)
T PLN02648        295 LLKWVGRAGEELQARLAEEVRSAVK-----------AGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRARED-FV  362 (480)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHhc-----------cCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCC-EE
Confidence            9999999995 99999999999884           12346899999999999999999999999999998887655 44


Q ss_pred             cC----ceeeCCCCeEEEehhhhccCccccCCCCCCCCCCCCCCCCCCccccCCcccccc---------CCCCCCCcchH
Q 043945          401 PS----GHRINKNHSILISYYAMGRMEEIWGKDCLEFKPERWISERGSIVHVPSYKFTAF---------HAGPRNCLGKD  467 (518)
Q Consensus       401 ~~----g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~PeRfl~~~~~~~~~~~~~~~~F---------g~G~~~C~G~~  467 (518)
                      ++    ||.||||+.|+++++.+||||++| +||++|+|+||++.++.    ....+++|         |+|+|.|+|++
T Consensus       363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~-~dP~~F~PeRf~~~~~~----~~~~~~~f~~g~~~~~~G~G~R~C~G~~  437 (480)
T PLN02648        363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVF-DRPEEFVPDRFMGEEGE----KLLKYVFWSNGRETESPTVGNKQCAGKD  437 (480)
T ss_pred             EecCCceEEECCCCEEEEChHHHhCCcccC-CCcceeCCCCCCCCCcc----ccccccccCCCcccCCCCCCCccCccHH
Confidence            44    799999999999999999999999 99999999999865321    11234444         67779999999


Q ss_pred             HHHHHHHHHHHHHHhhce-EEeecCCC
Q 043945          468 TAFIQMKMVAALILGKYQ-VKIVQGHP  493 (518)
Q Consensus       468 ~A~~~~~~~l~~ll~~f~-~~~~~~~~  493 (518)
                      ||++|++++++.|+++|+ +++.++..
T Consensus       438 ~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        438 FVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             HHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence            999999999999999997 99877643


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.4e-52  Score=407.41  Aligned_cols=378  Identities=23%  Similarity=0.329  Sum_probs=297.4

Q ss_pred             HHHHHHHHhcCCeEEEeccccCCc--cEEEEcChhhHHHhhhcCCCCCCCCc---chhh-cccccCCc-eeecCChhHHH
Q 043945           46 EFATRVLKKSRGTLEFKGPWFAKM--DFIITSDPMNVHYISSKNFSNYPKGP---DLRM-ILEPFGDG-VFAADGNLWKM  118 (518)
Q Consensus        46 ~~~~~~~~~yG~v~~~~~p~~~~~--~~v~v~dpe~i~~v~~~~~~~~~~~~---~~~~-~~~~~g~~-l~~~~g~~w~~  118 (518)
                      .....+.+.||.++.+.   ..+.  ..+++++++.++++++++. .+++..   .... .....|.+ ++..||+.|++
T Consensus        26 ~~~~~~~~p~~~~~~~~---~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r  101 (411)
T COG2124          26 FFLERAEDPYGDYFTLR---LPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhHHHHhCCCchhhhhh---ccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHH
Confidence            34455667888887773   3332  3899999999999998862 222221   1111 23455655 78899999999


Q ss_pred             hhhhcccCCChhhHHHHHHHHHHHHHHhcHHHHhhhhccCCceechHHHHHHHHHHHHHHHHhCCCCCCCCCCCCchHHH
Q 043945          119 QRKMIHSVMKHKKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGINPNYLSFEFPQVAYA  198 (518)
Q Consensus       119 ~R~~l~~~f~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  198 (518)
                      +||+++++|+++.++.+.+ .+.+. .+.+.+.+ .  .. ..+++.+.+..+++++++ .+||.+.+      ....+.
T Consensus       102 ~Rkl~~~~F~~~~~~~~~~-~i~~~-~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~------~~~~~~  168 (411)
T COG2124         102 LRKLLAPAFTPRALRGYRP-LIREI-ADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLE------DRPQLL  168 (411)
T ss_pred             HHHHhccccCHHHHHHHHH-HHHHH-HHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHH------HHHHHH
Confidence            9999999999999999755 55555 44444444 2  22 688899999999999999 99999874      222233


Q ss_pred             HHHHHHHHHHHHHhhcChhhHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCchhhhhHHHHHHhcc
Q 043945          199 NAFNATEQAVFYRHIVPKSWWKLQKWLHIGKEKELSKAMKTFDRFLYECISLKRERLLTSRKASTEEEEFDVLTAFMVEG  278 (518)
Q Consensus       199 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~  278 (518)
                      .........     ..|       ...+.....+..++.+.+.+++.++|++++.           ...+|+++.|+...
T Consensus       169 ~~~~~~~~~-----~~~-------~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~-----------~~~~dlls~l~~a~  225 (411)
T COG2124         169 RWSDALLLR-----LDP-------DLGPEEPWRRARAARRELDAYLRALIAERRA-----------APRDDLLSLLLSAE  225 (411)
T ss_pred             HHHHHHHhc-----cCc-------ccCCcccHHHHHHHHHHHHHHHHHHHHHhcc-----------CCcccHHHHHHHHh
Confidence            333222221     001       0111233567788999999999999999993           67889999999876


Q ss_pred             hhhhhhhhhhhhhcccCCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhhhccccccccccc
Q 043945          279 EEEEEMNEDREIGALKRNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMVMQKQEEEEDDGEK  358 (518)
Q Consensus       279 ~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~  358 (518)
                      ++++.          .+|++||.++++.+++||+|||+++|+|++|.|++||++++++++|.+                 
T Consensus       226 ~~~~~----------~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~-----------------  278 (411)
T COG2124         226 DDGGG----------RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPD-----------------  278 (411)
T ss_pred             hCCCC----------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcc-----------------
Confidence            54432          299999999999999999999999999999999999999999998831                 


Q ss_pred             ccccchhhhcCchHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCccccCCCCCCCCCCCC
Q 043945          359 RLFFDAKQVNRMVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEEIWGKDCLEFKPERW  438 (518)
Q Consensus       359 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~g~~p~~F~PeRf  438 (518)
                       .          ||++++|+|+||++||++. .+|++.+|+.++|+.||||+.|+++++.+||||++| ++|++|+|+||
T Consensus       279 -~----------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~  345 (411)
T COG2124         279 -R----------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERF  345 (411)
T ss_pred             -h----------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCC
Confidence             1          8899999999999999999 888998999889999999999999999999999999 99999999999


Q ss_pred             CCCCCCccccCCccccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCCCCCCccceeeecCCCeeEEEeec
Q 043945          439 ISERGSIVHVPSYKFTAFHAGPRNCLGKDTAFIQMKMVAALILGKYQVKIVQGHPVSPCNSMVLHMKYGLKVQLSKR  515 (518)
Q Consensus       439 l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (518)
                      .           ..|+|||+|+|.|+|..||++|++++|+.++++|++....+ ........++.+..+..+.++.|
T Consensus       346 ~-----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         346 N-----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             C-----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence            6           46999999999999999999999999999999998888776 33344556677777777777765


No 33 
>PF14991 MLANA:  Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=49.87  E-value=5.4  Score=30.14  Aligned_cols=20  Identities=35%  Similarity=0.999  Sum_probs=0.0

Q ss_pred             HHHHHHHHHhhhchhccccc
Q 043945            9 EMIVASLFILIGCLWCFKRS   28 (518)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~   28 (518)
                      +++||++++++.|+||++++
T Consensus        32 L~VILgiLLliGCWYckRRS   51 (118)
T PF14991_consen   32 LIVILGILLLIGCWYCKRRS   51 (118)
T ss_dssp             --------------------
T ss_pred             HHHHHHHHHHHhheeeeecc
Confidence            34566667778899988765


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=47.45  E-value=13  Score=24.75  Aligned_cols=8  Identities=50%  Similarity=1.456  Sum_probs=6.1

Q ss_pred             CCCCCCCC
Q 043945          434 KPERWISE  441 (518)
Q Consensus       434 ~PeRfl~~  441 (518)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            68888864


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=46.77  E-value=48  Score=21.04  Aligned_cols=42  Identities=12%  Similarity=0.152  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHH
Q 043945          299 FLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEM  340 (518)
Q Consensus       299 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei  340 (518)
                      ++...+..++=.|-|-.+-.++-.|.+..-||+....+-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666667777777788888888888999888887776


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=41.96  E-value=26  Score=23.09  Aligned_cols=25  Identities=16%  Similarity=0.122  Sum_probs=19.0

Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHhh
Q 043945          320 VWFFWLVATHPSVENKILEEMKANM  344 (518)
Q Consensus       320 ~~~l~~L~~~p~~q~~l~~Ei~~~~  344 (518)
                      .-++.+|.+||++.++|.+.-.+.+
T Consensus         3 Q~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcCCeeEe
Confidence            3467899999999999987544444


No 37 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=36.72  E-value=28  Score=27.56  Aligned_cols=23  Identities=26%  Similarity=0.444  Sum_probs=17.0

Q ss_pred             CCCcchHHHHHHHHHHHHHHHhh
Q 043945          461 RNCLGKDTAFIQMKMVAALILGK  483 (518)
Q Consensus       461 ~~C~G~~~A~~~~~~~l~~ll~~  483 (518)
                      -+|.|++||+.++-.++..++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999875


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=33.55  E-value=19  Score=23.18  Aligned_cols=11  Identities=36%  Similarity=0.809  Sum_probs=9.1

Q ss_pred             cccCCCCCCCc
Q 043945          454 TAFHAGPRNCL  464 (518)
Q Consensus       454 ~~Fg~G~~~C~  464 (518)
                      -+||.|.|+|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999983


No 39 
>PF15102 TMEM154:  TMEM154 protein family
Probab=31.29  E-value=34  Score=27.61  Aligned_cols=21  Identities=10%  Similarity=0.189  Sum_probs=9.8

Q ss_pred             hhHHHHHHHHHHhhhchhccc
Q 043945            6 SYVEMIVASLFILIGCLWCFK   26 (518)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~   26 (518)
                      ..+++++++++++++++++++
T Consensus        64 P~VLLvlLLl~vV~lv~~~kR   84 (146)
T PF15102_consen   64 PLVLLVLLLLSVVCLVIYYKR   84 (146)
T ss_pred             HHHHHHHHHHHHHHheeEEee
Confidence            334444444444444445544


No 40 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=26.97  E-value=42  Score=26.75  Aligned_cols=9  Identities=0%  Similarity=-0.470  Sum_probs=5.4

Q ss_pred             chhhhhHHh
Q 043945           29 SRTRMLSTL   37 (518)
Q Consensus        29 P~iG~~~~~   37 (518)
                      |+-|+-+..
T Consensus        33 P~~gt~w~~   41 (130)
T PF12273_consen   33 PIYGTRWMA   41 (130)
T ss_pred             CcCCceecC
Confidence            666665554


No 41 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=26.52  E-value=87  Score=18.73  Aligned_cols=13  Identities=23%  Similarity=0.572  Sum_probs=9.9

Q ss_pred             HhcCchHHHHHHH
Q 043945          326 VATHPSVENKILE  338 (518)
Q Consensus       326 L~~~p~~q~~l~~  338 (518)
                      +.+||++++.+++
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3479999988764


No 42 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=25.44  E-value=4.2e+02  Score=22.80  Aligned_cols=94  Identities=14%  Similarity=0.067  Sum_probs=51.5

Q ss_pred             hhhhhHHHHHHHHHHHHhcCchHHH----------HHHHHHHHhhhhhcccccccccccccccch--hhhcCchHHHHHH
Q 043945          310 AGKETVNSGLVWFFWLVATHPSVEN----------KILEEMKANMVMQKQEEEEDDGEKRLFFDA--KQVNRMVYLHAAL  377 (518)
Q Consensus       310 ag~~tt~~~l~~~l~~L~~~p~~q~----------~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~lp~l~a~i  377 (518)
                      ||..||+.+..-++..+..++...+          ..+.+|+.+..            .+..+++  ...+.++.|+.+.
T Consensus        16 AGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~------------~GrhisyFgpeANdf~~LE~~f   83 (289)
T COG3954          16 AGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARD------------AGRHISYFGPEANDFGLLEQTF   83 (289)
T ss_pred             CCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHH------------cCCcceecCccccchHHHHHHH
Confidence            6777777777777777766654331          22333333321            2333443  3346788888888


Q ss_pred             HhhcccCCCCcCccccccCCceecCceeeCCCCeEEEehhhhccCcc-ccCCCCCCCCCCCCCCC
Q 043945          378 RETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILISYYAMGRMEE-IWGKDCLEFKPERWISE  441 (518)
Q Consensus       378 ~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~~~~~~~~d~~-~~g~~p~~F~PeRfl~~  441 (518)
                      .|--|..   .+..|+...+.                       |+. -|+..|.+|.|.-=+.+
T Consensus        84 ~eYg~~G---~Gr~R~YlHt~-----------------------dEAvp~nq~PGTFTpW~~lpe  122 (289)
T COG3954          84 IEYGQSG---KGRSRKYLHTY-----------------------DEAVPWNQVPGTFTPWQPLPE  122 (289)
T ss_pred             HHhcccC---Ccchhhhhhch-----------------------hhcCccCCCCCCCCCcccCCC
Confidence            8865543   22333333221                       222 26678888888664444


No 43 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=22.47  E-value=66  Score=27.89  Aligned_cols=43  Identities=14%  Similarity=0.083  Sum_probs=29.2

Q ss_pred             chHHHHHHHhhcccCCCCcCccccccCCceecCceeeCCCCeEEE
Q 043945          370 MVYLHAALRETLRLYPPVPYNHKISAQADVLPSGHRINKNHSILI  414 (518)
Q Consensus       370 lp~l~a~i~E~lRl~~~~~~~~~~~~~~~~~~~g~~ip~Gt~v~~  414 (518)
                      -..+.|||.|+.-+..- . ..|-...+++.++|..|||||.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~G-s-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDG-S-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCC-C-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            44577888888766432 1 2233345677779999999998765


No 44 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=22.31  E-value=3.1e+02  Score=19.88  Aligned_cols=51  Identities=6%  Similarity=-0.028  Sum_probs=42.8

Q ss_pred             CCcHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCchHHHHHHHHHHHhhh
Q 043945          295 RNDKFLRDTAFNLLAAGKETVNSGLVWFFWLVATHPSVENKILEEMKANMV  345 (518)
Q Consensus       295 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  345 (518)
                      .+...........++-=+..++....-.+.+-++||+..+++.+.+..-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            445566667778888899999999999999999999999999998877653


Done!