BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043946
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/198 (89%), Positives = 187/198 (94%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KVV+ ETAKAFADE+GIPFMETSAK++ NV+QAFMAM A IK+RMASQPA NARP
Sbjct: 126 TANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPA 185
Query: 181 TVQIKGQPVNQKASCCST 198
TVQI+GQPVNQK SCCS+
Sbjct: 186 TVQIRGQPVNQKTSCCSS 203
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/198 (87%), Positives = 187/198 (94%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGIIIVYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T+ + + YETAKAFADEIGIPFMETSAKD+ NVEQAFMAM+A IK RMASQPA NNARPP
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185
Query: 181 TVQIKGQPVNQKASCCST 198
TVQI+GQPV QK CCST
Sbjct: 186 TVQIRGQPVAQKNGCCST 203
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/198 (87%), Positives = 187/198 (94%), Gaps = 1/198 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+ YDVTD ESFNNVKQWLNEIDRYASENVNKLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T +KVVS ETAKAFADE+GIPF+ETSAK++ NVE+AFMAMTA IK RMASQPA ++PP
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPA-GGSKPP 184
Query: 181 TVQIKGQPVNQKASCCST 198
TVQI+GQPVNQ++ CCS+
Sbjct: 185 TVQIRGQPVNQQSGCCSS 202
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/197 (85%), Positives = 184/197 (93%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
+ +VVSYE KA ADEIGIPF+ETSAKD+ NVE+AFM M +IKNRMASQPA N ++P
Sbjct: 126 AENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185
Query: 181 TVQIKGQPVNQKASCCS 197
TVQ++GQPV Q++SCCS
Sbjct: 186 TVQMRGQPVAQQSSCCS 202
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/198 (87%), Positives = 186/198 (93%), Gaps = 1/198 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+ YDVTD ESFNNVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T +KVVS ETAKAFADE+GIPF+ETSAK++ NVE+AFMAMTA IK RMASQPA A+PP
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPA-GGAKPP 184
Query: 181 TVQIKGQPVNQKASCCST 198
TVQI+GQPVNQ++ CCS+
Sbjct: 185 TVQIRGQPVNQQSGCCSS 202
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/197 (82%), Positives = 175/197 (88%), Gaps = 1/197 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRTVE DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y AKAFADEIGIPF+ETSAK++ NVEQAFM M A+IKNRMASQP A P
Sbjct: 126 TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGP 185
Query: 181 TVQIK-GQPVNQKASCC 196
V+ + G+P+N K+S C
Sbjct: 186 VVRPQEGKPINSKSSSC 202
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 324 bits (831), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/197 (81%), Positives = 174/197 (88%), Gaps = 1/197 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRTVE DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y+ AKAFADEIGIPF+ETSAK++ NVEQAFM M A+IKNRMASQP P
Sbjct: 126 TGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGP 185
Query: 181 TVQ-IKGQPVNQKASCC 196
V+ +G+P+N K+S C
Sbjct: 186 VVRPTEGKPINNKSSSC 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 322 bits (825), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 165/196 (84%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM A
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 181 TVQIKGQPVNQKASCC 196
V+I+ PV Q C
Sbjct: 189 NVKIQSTPVKQSGGGC 204
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 322 bits (825), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 165/196 (84%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM A
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 181 TVQIKGQPVNQKASCC 196
V+I+ PV Q C
Sbjct: 189 NVKIQSTPVKQSGGGC 204
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 322 bits (825), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 165/196 (84%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM A
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 181 TVQIKGQPVNQKASCC 196
V+I+ PV Q C
Sbjct: 189 NVKIQSTPVKQSGGGC 204
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 322 bits (825), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 165/196 (84%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM A
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 181 TVQIKGQPVNQKASCC 196
V+I+ PV Q C
Sbjct: 189 NVKIQSTPVKQSGGGC 204
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 319 bits (818), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 164/196 (83%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQ SFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM A
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 181 TVQIKGQPVNQKASCC 196
V+I+ PV Q C
Sbjct: 189 NVKIQSTPVKQSGGGC 204
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 319 bits (817), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 163/196 (83%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV Y TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM +
Sbjct: 126 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKS 185
Query: 181 TVQIKGQPVNQKASCC 196
V I+ PV C
Sbjct: 186 NVNIQSTPVKSSGGGC 201
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 317 bits (812), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/197 (76%), Positives = 169/197 (85%), Gaps = 1/197 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDL 128
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV + TAK +AD++GIPF+ETSAK++ NVEQAFM M A+IKNRM A ++++P
Sbjct: 129 TTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPS 188
Query: 181 TVQIKGQPVN-QKASCC 196
PV+ K CC
Sbjct: 189 VKINSSTPVSANKGGCC 205
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 315 bits (807), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/198 (75%), Positives = 171/198 (86%), Gaps = 2/198 (1%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+GNK D+
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMN-NARP 179
+ KVVS ET +A ADE+GIPF+ETSAKDS+NVEQAF+ + +IK +M SQ N + P
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185
Query: 180 PTVQIKGQPVNQ-KASCC 196
TVQ+KGQP+ Q CC
Sbjct: 186 GTVQMKGQPIQQNNGGCC 203
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 309 bits (792), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 150/196 (76%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV Q C
Sbjct: 185 NLKIDSTPVKQAGGGC 200
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 307 bits (786), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/196 (75%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRT+TSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +G+PF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV + C
Sbjct: 185 NLKIDSTPVKSASGGC 200
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 307 bits (786), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 172/203 (84%), Gaps = 5/203 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDS VGKSC LLRFADDSY+DSYISTIGVDFKIRTVE +GKTVKLQIWDTA
Sbjct: 6 DYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGIIIVYD+TD ESFNNVKQWL+EIDRYA+++V KLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADI-KNRMASQPAMNNARP 179
+ + V A+A+A E+GIPF+ETSAK+S+NVE+AF+AM+A I K++ SQ A+
Sbjct: 126 AENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPS 185
Query: 180 PTVQIKGQPVNQK----ASCCST 198
VQ+KG+P+ Q+ + CCST
Sbjct: 186 NVVQMKGRPIQQEQQKSSRCCST 208
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 307 bits (786), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV C
Sbjct: 185 NLKIDSTPVKPAGGGC 200
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 307 bits (786), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV C
Sbjct: 185 NLKIDSTPVKPAGGGC 200
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 306 bits (785), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 148/196 (75%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +G+PF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV + C
Sbjct: 185 NLKIDSTPVKPASGGC 200
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 306 bits (784), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV Q C
Sbjct: 185 NLKIDSTPVKQAGGGC 200
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 305 bits (782), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/196 (75%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYASENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV C
Sbjct: 185 NLKIDSTPVKPAGGGC 200
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 305 bits (780), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/198 (74%), Positives = 160/198 (80%), Gaps = 2/198 (1%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKTVKLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGI +VYDVTD +SFNNVKQWL EIDRYA+E VNKLLVGNK D+
Sbjct: 66 GQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDM 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
TDKKVV Y AK FAD +GIPF+ETSAK++ NVEQAF+ M IK RM S A NN +
Sbjct: 126 TDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKAS 185
Query: 181 TVQIKGQPV--NQKASCC 196
G V N CC
Sbjct: 186 VNVSPGHGVSNNSSGGCC 203
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 303 bits (777), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/196 (74%), Positives = 163/196 (83%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL+EIDRYA ENVNKLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T K+VVS + AK FA+ +GI F+ETSAK++ NVE+AFM M A IK RMA+ P A
Sbjct: 126 TAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVK 185
Query: 181 TVQIKGQPVNQKASCC 196
+ P N + CC
Sbjct: 186 LTPGQQVPSNGGSKCC 201
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/198 (74%), Positives = 164/198 (82%), Gaps = 2/198 (1%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT E +GKTVKLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA E VN+LLVGNK D+
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDM 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQP-AMNNARP 179
DKKVV Y AK FAD + IPF+ETSAKDS NVEQAF+ M+ IK RM + A +NA+
Sbjct: 126 VDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKS 185
Query: 180 PTVQIKGQPVNQKAS-CC 196
+G V+Q +S CC
Sbjct: 186 SVKVGQGTNVSQSSSNCC 203
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 297 bits (760), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 162/196 (82%), Gaps = 1/196 (0%)
Query: 2 YLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAG 61
YLFKLLLIGDSGVGKSCLLLRFADD+Y +S+ISTIGVDFKIRT+E +GKT+KLQIWDTAG
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAG 66
Query: 62 QERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLT 121
QERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A ENVNKLLVGNK DL
Sbjct: 67 QERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLV 126
Query: 122 DKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRM-ASQPAMNNARPP 180
KKVV + TAKAFAD + IPF+ETSAK S NVEQAFM M +IKNR+ ASQP +
Sbjct: 127 AKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNK 186
Query: 181 TVQIKGQPVNQKASCC 196
V P++ K+ CC
Sbjct: 187 VVPGSSAPISPKSGCC 202
>sp|Q92928|RAB1C_HUMAN Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5
SV=2
Length = 201
Score = 290 bits (743), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/196 (72%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
D LFKLLLIGDSGVGKSCLLLRFADD Y +SYISTIGVDFKI+T+E DGKT+KLQIWDTA
Sbjct: 6 DCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+ASENVNKLLVGNK DL
Sbjct: 66 GQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK +M A R P
Sbjct: 126 TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGER-P 184
Query: 181 TVQIKGQPVNQKASCC 196
++I PV C
Sbjct: 185 NLKIDSTPVKPAGGGC 200
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 281 bits (718), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/201 (69%), Positives = 155/201 (77%), Gaps = 5/201 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIG+SGVGKSCLLLRF+DD+Y + YISTIGVDFKI+TVE DGKTVKLQIWDTA
Sbjct: 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+ V KLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+VV Y+ AK FAD +PF+ETSA DS NVE AF+ M IK M+ Q +
Sbjct: 126 KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKK 185
Query: 181 ----TVQIKGQPV-NQKASCC 196
V +KGQ + N CC
Sbjct: 186 EDKGNVNLKGQSLTNTGGGCC 206
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 279 bits (713), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGAHGII+VYDVTD SFNNVKQW+ EI RYA ++V +LLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDL 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNA--R 178
+KK+V TA+ +AD +GIPF+ETSAK S NVEQAFM M ++IK NN+
Sbjct: 126 IEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNNSTYN 185
Query: 179 PPTVQIKG-QPVNQKASC 195
V+ G P+ +K C
Sbjct: 186 AHVVKPTGFTPIGKKKKC 203
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/187 (69%), Positives = 154/187 (82%), Gaps = 2/187 (1%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
D+ FK+LLIGDSGVGKSCLLLRFADDS+ D++ISTIGVDFKI+T+ DGKT+KLQIWDTA
Sbjct: 8 DFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTA 67
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA ENVNKLLVGNK DL
Sbjct: 68 GQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDL 127
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
++KVV AK+FA+ GIPF+ETSAK++ NVE+ F++M DIKNR+A +P
Sbjct: 128 VNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQETPKPD 185
Query: 181 TVQIKGQ 187
V IK +
Sbjct: 186 EVDIKSK 192
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 159/199 (79%), Gaps = 6/199 (3%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+++VNK+L+GNKCD+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDM 132
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
+KKVV K+ ADE GI F+ETSAK+S+NVE+AF+++ DIK RM P N +P
Sbjct: 133 AEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQPQ 189
Query: 181 TVQIK---GQPVNQKASCC 196
VQ G N+K +CC
Sbjct: 190 VVQPGTNLGANNNKKKACC 208
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 256 bits (653), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 155/196 (79%), Gaps = 5/196 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
D+L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E +GK +KLQIWDTA
Sbjct: 13 DFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++AS++VNK+L+GNKCD+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDM 132
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
T+KKVV K+ ADE GI F+ETSAK+S+NVE+AF+ + DIK RM P P
Sbjct: 133 TEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTP-----NDP 187
Query: 181 TVQIKGQPVNQKASCC 196
I P N+K +CC
Sbjct: 188 DHTICITPNNKKNTCC 203
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 155/203 (76%), Gaps = 5/203 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
Query: 121 TD-KKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
+ K+ V +A ADE GI F ETSAK +LNVE+ F ++ DIK R+A A+P
Sbjct: 133 DESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQP 192
Query: 180 P-TVQIKGQPVNQ---KASCCST 198
T++ Q NQ K++CC +
Sbjct: 193 SITIKPADQSGNQAAAKSACCGS 215
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 156/207 (75%), Gaps = 12/207 (5%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM 132
Query: 121 TD-KKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
+ K+ V +A ADE GI F ETSAK +LNVE+ F ++ DIK R++ + A P
Sbjct: 133 DESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDS--RAEP 190
Query: 180 PTVQIK--------GQPVNQKASCCST 198
T++I GQ QK++CC T
Sbjct: 191 ATIKISQTDQAAGAGQAT-QKSACCGT 216
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 154/206 (74%), Gaps = 10/206 (4%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS++VNK+LVGNK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADM 132
Query: 121 TD-KKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
+ K+ V +A ADE G+ F ETSAK +LNVE+ F ++ DIK R+A A A P
Sbjct: 133 DESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDA--RAEP 190
Query: 180 PTVQIK-------GQPVNQKASCCST 198
T++I QK++CC T
Sbjct: 191 QTIKINQSDQGAGTSQATQKSACCGT 216
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 141/165 (85%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
D L K+L+IGDSGVGKSC+LLRFAD+ + DSYISTIGVDF IRT+E DGK +KLQIWDTA
Sbjct: 31 DMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTA 90
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERF+TIT+SYYRGAHG+IIVYD+T +SFN++K+WL ++DR+AS +V KL+VGNKCDL
Sbjct: 91 GQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDL 150
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIK 165
K+ V ++ AK FADE+ IP METSAK+S +++AF+ + +DIK
Sbjct: 151 NSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 148/206 (71%), Gaps = 10/206 (4%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
D L KLLL+GDSGVGKSCLLLRF DD + S+I+TIG+DFKI+ V+ DGK VKLQIWDTA
Sbjct: 11 DALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTA 70
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+ I+++AS+NVNK+LVGNK DL
Sbjct: 71 GQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDL 130
Query: 121 T-DKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
DK+VVS +A ADE G F ETSAKD+++VE+AF+A+ D+ RM + A
Sbjct: 131 AEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQ 190
Query: 180 PTVQIKGQPVN---------QKASCC 196
QPV Q SCC
Sbjct: 191 QQQLSAAQPVRLTSGSPSPAQGKSCC 216
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 143/167 (85%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTA 66
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++ASENV K+L+GNKCD
Sbjct: 67 GQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDC 126
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNR 167
D++ VS+E +A ADE+G+ F+E SAK ++NV++AF + +IK +
Sbjct: 127 EDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQ 173
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 236 bits (603), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 153/204 (75%), Gaps = 9/204 (4%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKADM 132
Query: 121 TD-KKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
+ K+ V +A ADE GI F ETSAK +LNVE FM++ DIK R+ A P
Sbjct: 133 DESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETD--TKAEP 190
Query: 180 PTVQIKGQ------PVNQKASCCS 197
++I Q +K++CCS
Sbjct: 191 QGIKITKQDTAASSSTAEKSACCS 214
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 236 bits (602), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+K P QK S
Sbjct: 186 NQGVKITPDQQKRS 199
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 236 bits (602), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+K P QK S
Sbjct: 186 NQGVKITPDQQKRS 199
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 236 bits (602), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+K P QK S
Sbjct: 186 NQGVKITPDQQKRS 199
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+K P QK S
Sbjct: 186 NQGVKITPDQQKRS 199
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 154/206 (74%), Gaps = 11/206 (5%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK +KLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTA 72
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS++VNK+LVGNK D+
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADM 132
Query: 121 TD-KKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARP 179
+ K+ V +A ADE GI F ETSAK + NVEQ F+++ DIK R+ A P
Sbjct: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDT--KAEP 190
Query: 180 PTVQIKGQ--------PVNQKASCCS 197
++I Q N+K++CCS
Sbjct: 191 QGIKITKQDANKASSSSTNEKSACCS 216
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 145/194 (74%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF N++ W+ I+ +AS +V K+++GNKCD
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDA 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A GI FMETSAK ++N+E AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+K P QK S
Sbjct: 186 NQGVKITPDQQKKS 199
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 233 bits (593), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+ +K QK +
Sbjct: 186 SHGVKITVEQQKRT 199
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 233 bits (593), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 149/194 (76%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ +
Sbjct: 126 NDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGS 185
Query: 181 TVQIKGQPVNQKAS 194
+ +K QK +
Sbjct: 186 SHGVKITVEQQKRT 199
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 146/189 (77%), Gaps = 5/189 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ + MN++
Sbjct: 126 NDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRK--MNDSNSS 183
Query: 181 TVQIKGQPV 189
G PV
Sbjct: 184 GA---GGPV 189
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 146/189 (77%), Gaps = 5/189 (2%)
Query: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTA 60
DYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK +KLQIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65
Query: 61 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
GQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDM 125
Query: 121 TDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMNNARPP 180
DK+ VS E + A + GI F+ETSAK S NVE+AF + DI ++ + MN++
Sbjct: 126 NDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRK--MNDSNSS 183
Query: 181 TVQIKGQPV 189
G PV
Sbjct: 184 GA---GGPV 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,036,098
Number of Sequences: 539616
Number of extensions: 2542855
Number of successful extensions: 13646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 11556
Number of HSP's gapped (non-prelim): 1323
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)