Query 043949
Match_columns 142
No_of_seqs 125 out of 571
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 17:06:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043949.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043949hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kk8a2 c.37.1.9 (A:1-28,A:77- 98.0 4.5E-06 3.2E-10 74.9 6.3 44 67-110 729-776 (789)
2 d2mysa2 c.37.1.9 (A:4-33,A:80- 97.9 4.1E-06 3E-10 75.1 5.8 44 67-110 733-780 (794)
3 d2mysa2 c.37.1.9 (A:4-33,A:80- 97.5 0.00011 8.1E-09 65.7 8.4 45 92-136 736-780 (794)
4 d1kk8a2 c.37.1.9 (A:1-28,A:77- 97.1 0.00049 3.6E-08 61.3 8.1 44 93-136 733-776 (789)
5 d1w7ja2 c.37.1.9 (A:63-792) My 95.3 0.008 5.8E-07 52.6 4.9 27 66-92 703-729 (730)
6 d1w7ja2 c.37.1.9 (A:63-792) My 78.0 1.2 9E-05 38.2 5.1 17 94-110 709-725 (730)
7 d2ts1a_ c.26.1.1 (A:) Tyrosyl- 3.5 4.2E+02 0.031 19.5 3.6 11 1-11 190-200 (319)
8 d1eexa_ c.1.19.3 (A:) Diol deh 2.7 5.3E+02 0.039 20.8 3.5 18 65-82 409-426 (551)
9 d1jila_ c.26.1.1 (A:) Tyrosyl- 2.2 6.7E+02 0.049 18.3 3.3 49 1-51 190-243 (323)
10 d1zxoa2 c.55.1.5 (A:107-280) H 2.2 4E+02 0.029 17.4 1.8 19 3-21 37-56 (174)
No 1
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=97.96 E-value=4.5e-06 Score=74.87 Aligned_cols=44 Identities=30% Similarity=0.301 Sum_probs=39.1
Q ss_pred HHhHHHHHHHHHHhHHHHHHHHHhHH----HHHHHHHHhhhHHHHHHH
Q 043949 67 KEDSAAIKIQAIFRAHLARRAFKALR----SLVKLQALVRGVCVRRQS 110 (142)
Q Consensus 67 ~~~~AAi~IQa~~RG~l~Rk~y~~l~----~iv~LQa~iRG~laRr~~ 110 (142)
....+|+.||++||||++|+.|+.++ +++.||+.+||+++|+.+
T Consensus 729 ~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~ 776 (789)
T d1kk8a2 729 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 776 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 34678999999999999999999866 688899999999999976
No 2
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=97.94 E-value=4.1e-06 Score=75.15 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=38.1
Q ss_pred HHhHHHHHHHHHHhHHHHHHHHHhHH----HHHHHHHHhhhHHHHHHH
Q 043949 67 KEDSAAIKIQAIFRAHLARRAFKALR----SLVKLQALVRGVCVRRQS 110 (142)
Q Consensus 67 ~~~~AAi~IQa~~RG~l~Rk~y~~l~----~iv~LQa~iRG~laRr~~ 110 (142)
....+|+.||++||||++|++|+.+. +++.||+.+||+++|+.+
T Consensus 733 ~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 733 KLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34578999999999999999998742 789999999999999876
No 3
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=97.52 E-value=0.00011 Score=65.66 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 043949 92 RSLVKLQALVRGVCVRRQSRVAMHAMHALVRLQVRIRARQLLSRQ 136 (142)
Q Consensus 92 ~~iv~LQa~iRG~laRr~~~~~l~~~~aav~IQa~vRg~~aRr~~ 136 (142)
..++.||+.+||+++|++|...+....|++.||+.+||+..|+..
T Consensus 736 ~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 736 EIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 368899999999999999976665568999999999999998864
No 4
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=97.15 E-value=0.00049 Score=61.31 Aligned_cols=44 Identities=23% Similarity=0.249 Sum_probs=37.6
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 043949 93 SLVKLQALVRGVCVRRQSRVAMHAMHALVRLQVRIRARQLLSRQ 136 (142)
Q Consensus 93 ~iv~LQa~iRG~laRr~~~~~l~~~~aav~IQa~vRg~~aRr~~ 136 (142)
.++.||+.+||+++|++|........+++.||+.+|++.+|++.
T Consensus 733 ~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~ 776 (789)
T d1kk8a2 733 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 776 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 68889999999999999965444456899999999999999864
No 5
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=95.27 E-value=0.008 Score=52.61 Aligned_cols=27 Identities=33% Similarity=0.525 Sum_probs=22.0
Q ss_pred HHHhHHHHHHHHHHhHHHHHHHHHhHH
Q 043949 66 AKEDSAAIKIQAIFRAHLARRAFKALR 92 (142)
Q Consensus 66 ~~~~~AAi~IQa~~RG~l~Rk~y~~l~ 92 (142)
+....+|+.||+.||||++|++|.+++
T Consensus 703 ~~l~~~~~~iQ~~~R~~l~Rk~~~r~r 729 (730)
T d1w7ja2 703 DKLRAACIRIQKTIRGWLMRKKYMRMR 729 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334568999999999999999998754
No 6
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=78.04 E-value=1.2 Score=38.23 Aligned_cols=17 Identities=24% Similarity=0.530 Sum_probs=9.0
Q ss_pred HHHHHHHhhhHHHHHHH
Q 043949 94 LVKLQALVRGVCVRRQS 110 (142)
Q Consensus 94 iv~LQa~iRG~laRr~~ 110 (142)
++.||+.+|||++|++|
T Consensus 709 ~~~iQ~~~R~~l~Rk~~ 725 (730)
T d1w7ja2 709 CIRIQKTIRGWLMRKKY 725 (730)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555555555554
No 7
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
Probab=3.53 E-value=4.2e+02 Score=19.54 Aligned_cols=11 Identities=36% Similarity=0.788 Sum_probs=10.2
Q ss_pred CCCchhhHHHH
Q 043949 1 MGTSSNWFNVL 11 (142)
Q Consensus 1 m~~s~~Wf~~~ 11 (142)
+|||--||+++
T Consensus 190 iGGsDQ~gNi~ 200 (319)
T d2ts1a_ 190 IGGSDQWGNIT 200 (319)
T ss_dssp EEEGGGHHHHH
T ss_pred hccchhhhHHH
Confidence 68999999999
No 8
>d1eexa_ c.1.19.3 (A:) Diol dehydratase, alpha subunit {Klebsiella oxytoca [TaxId: 571]}
Probab=2.71 E-value=5.3e+02 Score=20.82 Aligned_cols=18 Identities=39% Similarity=0.475 Sum_probs=14.5
Q ss_pred HHHHhHHHHHHHHHHhHH
Q 043949 65 IAKEDSAAIKIQAIFRAH 82 (142)
Q Consensus 65 ~~~~~~AAi~IQa~~RG~ 82 (142)
...+++||..||+.|++.
T Consensus 409 i~vRnkAA~AiqaVf~~L 426 (551)
T d1eexa_ 409 IAIRNKAARALQAVFAGM 426 (551)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 345789999999999863
No 9
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=2.15 E-value=6.7e+02 Score=18.25 Aligned_cols=49 Identities=18% Similarity=0.217 Sum_probs=25.1
Q ss_pred CCCchhhHHHHHHH-HHHhc---ccceeeec-CCCCCCCccccCCcccccccccCc
Q 043949 1 MGTSSNWFNVLRRK-VHRKS---HRDITIRH-SPTPSQGATIRKVPEEAANCIDNN 51 (142)
Q Consensus 1 m~~s~~Wf~~~rr~-f~r~~---~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 51 (142)
+|||--||+++..+ +.+.- ...+.+.. -...+.+++-|++.. .++|-..
T Consensus 190 iGGsDQ~~Ni~~Grdl~~~~~~~~~~~~it~pLl~~~~G~Km~KS~~--n~i~l~~ 243 (323)
T d1jila_ 190 VGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSES--GAVWLDA 243 (323)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHCCCCCEEEEECCCBCTTSCBTTBCSS--SBCBSST
T ss_pred hhccccHHHhhhhhhhhhhhcccccceEEecccccchhhhhhhhcCC--CCeeeec
Confidence 58999999999333 22221 22333332 344455555555543 3445443
No 10
>d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=2.15 E-value=4e+02 Score=17.39 Aligned_cols=19 Identities=11% Similarity=0.115 Sum_probs=11.5
Q ss_pred CchhhHH-HHHHHHHHhccc
Q 043949 3 TSSNWFN-VLRRKVHRKSHR 21 (142)
Q Consensus 3 ~s~~Wf~-~~rr~f~r~~~~ 21 (142)
||..|+. ..-+.++++...
T Consensus 37 GSg~~iG~~al~~~~~~~~~ 56 (174)
T d1zxoa2 37 GSGAVLGKLLVGDILKNQLP 56 (174)
T ss_dssp SSHHHHHHHHHHHGGGTCSC
T ss_pred chHHHHHHHHHHHHHHhhCC
Confidence 7999993 333456655543
Done!